Query 014600
Match_columns 422
No_of_seqs 254 out of 2357
Neff 8.8
Searched_HMMs 46136
Date Fri Mar 29 06:43:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014600.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014600hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG2211 MelB Na+/melibiose sym 100.0 1.3E-62 2.7E-67 484.9 33.2 382 16-422 4-452 (467)
2 PRK11462 putative transporter; 100.0 4.8E-55 1E-59 444.1 35.9 377 19-422 4-444 (460)
3 PRK10429 melibiose:sodium symp 100.0 1E-51 2.2E-56 421.7 34.5 376 20-421 2-448 (473)
4 PRK09669 putative symporter Ya 100.0 1.5E-51 3.2E-56 417.5 34.7 379 18-422 3-444 (444)
5 PF13347 MFS_2: MFS/sugar tran 100.0 7.2E-49 1.6E-53 395.9 30.2 363 25-410 2-428 (428)
6 PRK09848 glucuronide transport 100.0 1.8E-45 4E-50 373.3 33.8 378 18-422 2-443 (448)
7 TIGR00792 gph sugar (Glycoside 100.0 7.4E-45 1.6E-49 367.0 35.0 371 26-422 1-436 (437)
8 KOG4830 Predicted sugar transp 99.9 3.7E-26 7.9E-31 204.4 9.4 282 16-348 9-352 (412)
9 PRK10504 putative transporter; 99.9 6.6E-23 1.4E-27 209.2 30.6 352 27-422 13-469 (471)
10 PF11700 ATG22: Vacuole efflux 99.9 3.2E-20 6.9E-25 188.3 32.7 350 22-414 2-475 (477)
11 PRK11902 ampG muropeptide tran 99.8 4.3E-18 9.3E-23 170.4 33.9 231 34-287 9-246 (402)
12 TIGR01301 GPH_sucrose GPH fami 99.8 1.4E-19 3E-24 182.8 23.2 256 22-279 2-287 (477)
13 TIGR00900 2A0121 H+ Antiporter 99.8 4E-18 8.8E-23 166.8 30.7 303 31-355 6-365 (365)
14 PRK03545 putative arabinose tr 99.8 7.1E-18 1.5E-22 168.0 31.7 212 45-286 30-241 (390)
15 PRK11273 glpT sn-glycerol-3-ph 99.8 1.8E-18 3.8E-23 175.9 27.3 288 47-357 51-414 (452)
16 PRK11010 ampG muropeptide tran 99.8 2.3E-17 5E-22 169.3 32.6 306 26-357 14-382 (491)
17 TIGR00899 2A0120 sugar efflux 99.8 2.9E-17 6.2E-22 162.0 31.5 295 33-357 6-353 (375)
18 PRK11646 multidrug resistance 99.8 2E-17 4.4E-22 165.5 30.7 304 18-355 7-361 (400)
19 PRK10473 multidrug efflux syst 99.8 7.8E-17 1.7E-21 160.5 34.2 222 39-286 18-239 (392)
20 PRK09874 drug efflux system pr 99.8 1.8E-17 3.8E-22 165.6 29.6 299 30-357 20-377 (408)
21 TIGR00893 2A0114 d-galactonate 99.8 2.3E-17 4.9E-22 162.6 29.5 283 46-355 16-375 (399)
22 PRK11663 regulatory protein Uh 99.8 3.5E-17 7.5E-22 165.5 30.5 289 42-357 41-403 (434)
23 PRK10489 enterobactin exporter 99.8 2E-17 4.4E-22 166.2 28.4 307 27-357 20-378 (417)
24 COG2270 Permeases of the major 99.8 1.9E-17 4.1E-22 159.9 23.9 323 19-355 9-405 (438)
25 TIGR00903 2A0129 major facilit 99.8 2.3E-16 4.9E-21 156.0 31.1 288 35-351 2-340 (368)
26 PRK09528 lacY galactoside perm 99.8 4.2E-17 9E-22 164.1 26.0 308 27-357 13-382 (420)
27 COG2814 AraJ Arabinose efflux 99.8 2.7E-16 5.8E-21 153.3 30.6 311 18-358 7-366 (394)
28 TIGR00890 2A0111 Oxalate/Forma 99.8 1.5E-16 3.3E-21 156.1 29.4 286 43-357 22-361 (377)
29 TIGR00881 2A0104 phosphoglycer 99.8 4E-17 8.6E-22 160.4 24.2 289 42-358 13-377 (379)
30 TIGR00891 2A0112 putative sial 99.8 1.4E-16 3E-21 158.4 27.5 308 24-357 12-395 (405)
31 TIGR00882 2A0105 oligosacchari 99.8 2.1E-16 4.7E-21 157.7 28.8 304 32-357 10-374 (396)
32 PRK10213 nepI ribonucleoside t 99.8 6.3E-16 1.4E-20 154.4 30.3 215 42-286 38-252 (394)
33 PRK09556 uhpT sugar phosphate 99.8 2.3E-17 4.9E-22 168.5 20.0 224 47-287 52-295 (467)
34 TIGR00897 2A0118 polyol permea 99.8 1.3E-15 2.9E-20 152.4 31.4 312 19-356 7-379 (402)
35 PRK15402 multidrug efflux syst 99.8 1.8E-15 3.9E-20 151.5 32.2 231 32-287 21-252 (406)
36 PRK14995 methyl viologen resis 99.7 1.5E-15 3.2E-20 156.3 30.1 301 27-353 9-413 (495)
37 TIGR00710 efflux_Bcr_CflA drug 99.7 4.8E-16 1E-20 153.7 25.6 225 38-287 19-243 (385)
38 PRK05122 major facilitator sup 99.7 1.9E-15 4.2E-20 150.8 29.5 304 25-357 16-368 (399)
39 PRK10054 putative transporter; 99.7 1.8E-15 3.8E-20 151.2 29.1 224 27-278 10-234 (395)
40 COG2271 UhpC Sugar phosphate p 99.7 3.2E-16 6.9E-21 151.3 22.6 279 55-358 60-414 (448)
41 PF07690 MFS_1: Major Facilita 99.7 3.6E-16 7.7E-21 152.3 23.5 226 34-284 6-240 (352)
42 TIGR00712 glpT glycerol-3-phos 99.7 2.3E-15 5E-20 152.4 30.2 220 47-286 49-287 (438)
43 TIGR00886 2A0108 nitrite extru 99.7 3.4E-16 7.3E-21 154.0 23.2 241 34-289 11-264 (366)
44 TIGR00901 2A0125 AmpG-related 99.7 7.2E-16 1.6E-20 151.4 25.2 231 42-288 6-246 (356)
45 PRK15403 multidrug efflux syst 99.7 1.3E-14 2.9E-19 145.8 33.2 220 43-287 35-255 (413)
46 TIGR02718 sider_RhtX_FptX side 99.7 1.2E-14 2.5E-19 144.9 32.1 300 33-357 10-370 (390)
47 PRK11551 putative 3-hydroxyphe 99.7 9.8E-15 2.1E-19 145.9 31.5 290 37-354 28-371 (406)
48 TIGR02332 HpaX 4-hydroxyphenyl 99.7 1.1E-15 2.3E-20 153.7 24.2 292 45-358 28-401 (412)
49 PRK09705 cynX putative cyanate 99.7 9.5E-15 2.1E-19 145.8 30.9 280 43-355 28-357 (393)
50 PRK12382 putative transporter; 99.7 1.6E-14 3.4E-19 144.0 32.1 304 24-357 15-368 (392)
51 PRK10091 MFS transport protein 99.7 1.2E-14 2.6E-19 144.4 30.8 230 28-287 7-236 (382)
52 PRK11195 lysophospholipid tran 99.7 1.2E-14 2.6E-19 145.1 30.8 231 27-287 6-242 (393)
53 TIGR00711 efflux_EmrB drug res 99.7 2.3E-15 5E-20 153.9 26.0 296 31-353 9-410 (485)
54 PRK15011 sugar efflux transpor 99.7 2.6E-14 5.6E-19 142.6 32.8 234 25-287 16-253 (393)
55 PRK11652 emrD multidrug resist 99.7 4.7E-15 1E-19 147.8 26.7 219 41-286 25-243 (394)
56 TIGR00885 fucP L-fucose:H+ sym 99.7 4.7E-14 1E-18 141.6 33.3 232 36-280 15-262 (410)
57 PRK12307 putative sialic acid 99.7 7.4E-15 1.6E-19 147.8 27.4 300 27-356 21-386 (426)
58 TIGR00894 2A0114euk Na(+)-depe 99.7 8.7E-15 1.9E-19 149.3 26.5 210 55-287 72-298 (465)
59 TIGR00883 2A0106 metabolite-pr 99.7 3E-14 6.6E-19 140.7 29.6 296 46-355 14-377 (394)
60 PRK11102 bicyclomycin/multidru 99.7 8.5E-15 1.8E-19 144.8 25.5 224 39-287 6-231 (377)
61 PRK03699 putative transporter; 99.7 3.9E-14 8.5E-19 141.4 30.1 219 41-287 24-242 (394)
62 TIGR00902 2A0127 phenyl propri 99.7 2.2E-14 4.8E-19 142.6 28.2 230 31-287 11-241 (382)
63 PRK03633 putative MFS family t 99.7 4.4E-14 9.5E-19 140.3 29.9 226 27-285 9-234 (381)
64 PRK10406 alpha-ketoglutarate t 99.7 1.3E-13 2.9E-18 139.3 33.9 228 44-285 41-278 (432)
65 PRK10133 L-fucose transporter; 99.7 1.5E-13 3.1E-18 139.3 33.6 273 3-287 5-296 (438)
66 PRK11128 putative 3-phenylprop 99.7 4E-14 8.6E-19 140.7 29.0 227 33-286 13-240 (382)
67 TIGR00895 2A0115 benzoate tran 99.7 2.5E-15 5.5E-20 148.7 20.2 163 40-227 33-195 (398)
68 TIGR00892 2A0113 monocarboxyla 99.7 1.9E-14 4E-19 146.5 25.9 285 45-357 40-400 (455)
69 cd06174 MFS The Major Facilita 99.7 5.4E-14 1.2E-18 136.4 28.0 274 32-357 7-331 (352)
70 PLN00028 nitrate transmembrane 99.6 6E-14 1.3E-18 143.6 25.6 230 43-289 55-291 (476)
71 TIGR00896 CynX cyanate transpo 99.6 1.7E-13 3.7E-18 134.6 26.9 213 44-286 20-232 (355)
72 PRK08633 2-acyl-glycerophospho 99.6 2.7E-13 6E-18 153.0 31.9 251 23-286 8-268 (1146)
73 TIGR00889 2A0110 nucleoside tr 99.6 3.1E-13 6.7E-18 136.1 28.2 289 33-357 11-375 (418)
74 PF03209 PUCC: PUCC protein; 99.6 4.2E-13 9.1E-18 130.3 27.4 320 53-404 9-395 (403)
75 PF03825 Nuc_H_symport: Nucleo 99.6 6.1E-13 1.3E-17 132.6 29.5 229 32-284 10-241 (400)
76 PRK10642 proline/glycine betai 99.6 2.1E-12 4.6E-17 132.7 34.4 242 31-285 23-285 (490)
77 PRK03893 putative sialic acid 99.6 5.3E-13 1.1E-17 137.1 29.1 158 27-209 23-180 (496)
78 PRK09952 shikimate transporter 99.6 1.5E-12 3.3E-17 131.9 31.2 219 55-286 56-286 (438)
79 PF05977 MFS_3: Transmembrane 99.6 1.1E-12 2.3E-17 134.9 30.1 313 20-355 6-371 (524)
80 PRK10077 xylE D-xylose transpo 99.6 5.7E-13 1.2E-17 136.1 27.3 167 55-228 51-218 (479)
81 PRK06814 acylglycerophosphoeth 99.6 1E-12 2.2E-17 148.3 31.5 204 58-286 51-261 (1140)
82 PRK15075 citrate-proton sympor 99.6 2.9E-12 6.3E-17 129.6 31.5 249 26-286 17-274 (434)
83 TIGR00879 SP MFS transporter, 99.6 2.2E-13 4.7E-18 137.9 23.4 152 56-227 68-219 (481)
84 PRK11043 putative transporter; 99.6 5.5E-12 1.2E-16 126.0 33.1 215 42-286 21-238 (401)
85 PF01306 LacY_symp: LacY proto 99.6 1.2E-13 2.5E-18 136.2 19.9 310 24-357 7-379 (412)
86 KOG2532 Permease of the major 99.6 6.9E-13 1.5E-17 134.1 26.1 266 55-358 69-354 (466)
87 PRK10207 dipeptide/tripeptide 99.6 2E-12 4.3E-17 132.6 29.0 171 31-225 21-194 (489)
88 TIGR00887 2A0109 phosphate:H+ 99.5 1.2E-11 2.6E-16 127.5 30.3 164 55-228 52-228 (502)
89 TIGR00788 fbt folate/biopterin 99.5 5E-12 1.1E-16 129.1 26.1 296 34-358 36-418 (468)
90 PRK15034 nitrate/nitrite trans 99.5 4.8E-12 1E-16 127.4 24.1 211 54-281 65-283 (462)
91 TIGR00924 yjdL_sub1_fam amino 99.5 3.5E-11 7.5E-16 123.2 29.6 164 28-215 14-183 (475)
92 TIGR00898 2A0119 cation transp 99.5 4.6E-11 1E-15 123.1 27.2 146 54-228 119-267 (505)
93 KOG3764 Vesicular amine transp 99.4 2.5E-12 5.4E-17 123.3 16.0 204 55-285 102-305 (464)
94 PF03092 BT1: BT1 family; Int 99.4 4.6E-11 1E-15 120.6 24.9 163 44-226 9-177 (433)
95 TIGR00805 oat sodium-independe 99.4 3.3E-12 7.1E-17 134.8 16.3 236 48-288 57-368 (633)
96 TIGR01299 synapt_SV2 synaptic 99.4 2.1E-10 4.5E-15 122.2 29.3 170 43-228 186-358 (742)
97 PRK09584 tppB putative tripept 99.4 3.5E-10 7.5E-15 116.5 30.1 158 32-212 29-189 (500)
98 COG2223 NarK Nitrate/nitrite t 99.4 6.6E-11 1.4E-15 114.9 21.7 221 46-289 35-257 (417)
99 PRK15462 dipeptide/tripeptide 99.3 2.7E-09 5.9E-14 108.7 31.4 157 33-212 18-177 (493)
100 COG0738 FucP Fucose permease [ 99.3 3.6E-09 7.7E-14 102.4 30.1 230 45-287 33-273 (422)
101 KOG2533 Permease of the major 99.3 1.6E-10 3.6E-15 117.4 20.3 214 55-287 77-310 (495)
102 KOG0637 Sucrose transporter an 99.3 1.1E-11 2.4E-16 120.9 9.4 160 24-183 32-199 (498)
103 TIGR00806 rfc RFC reduced fola 99.3 5.1E-09 1.1E-13 104.5 27.7 149 21-185 22-172 (511)
104 KOG1330 Sugar transporter/spin 99.2 1.2E-11 2.5E-16 121.1 7.0 186 55-264 64-258 (493)
105 KOG2504 Monocarboxylate transp 99.2 4.7E-09 1E-13 107.7 22.4 277 54-358 76-456 (509)
106 TIGR00889 2A0110 nucleoside tr 99.2 2E-09 4.2E-14 108.5 18.8 188 27-229 211-407 (418)
107 KOG0569 Permease of the major 99.1 1.2E-07 2.6E-12 95.8 27.5 207 60-287 61-306 (485)
108 PRK09705 cynX putative cyanate 99.0 1.6E-08 3.5E-13 100.9 17.7 170 36-229 217-386 (393)
109 PF06609 TRI12: Fungal trichot 99.0 6E-08 1.3E-12 100.3 21.7 153 45-225 65-218 (599)
110 KOG2615 Permease of the major 99.0 5.5E-08 1.2E-12 93.3 19.2 161 12-188 10-181 (451)
111 PTZ00207 hypothetical protein; 99.0 9.6E-08 2.1E-12 99.2 22.7 162 45-228 48-209 (591)
112 PRK10642 proline/glycine betai 99.0 4.7E-08 1E-12 100.5 20.3 171 36-228 262-433 (490)
113 PRK09556 uhpT sugar phosphate 98.9 1.4E-08 3.1E-13 103.7 14.6 169 38-220 272-445 (467)
114 KOG2325 Predicted transporter/ 98.9 8.1E-08 1.7E-12 96.4 19.2 170 49-230 59-235 (488)
115 PRK11551 putative 3-hydroxyphe 98.9 3E-08 6.5E-13 99.1 15.1 135 39-188 235-369 (406)
116 TIGR00880 2_A_01_02 Multidrug 98.9 1.1E-08 2.4E-13 85.2 10.1 135 67-226 6-140 (141)
117 TIGR00890 2A0111 Oxalate/Forma 98.9 2.6E-08 5.7E-13 97.5 14.3 156 38-216 219-374 (377)
118 PRK10504 putative transporter; 98.9 1E-07 2.2E-12 97.4 18.9 144 35-190 272-416 (471)
119 PRK09528 lacY galactoside perm 98.9 5.2E-08 1.1E-12 98.0 16.3 177 27-228 226-407 (420)
120 TIGR00897 2A0118 polyol permea 98.9 6.5E-08 1.4E-12 96.9 16.7 165 34-219 232-396 (402)
121 COG2807 CynX Cyanate permease 98.9 6.1E-06 1.3E-10 79.2 28.6 210 46-287 34-244 (395)
122 PRK15011 sugar efflux transpor 98.9 1.3E-07 2.7E-12 94.5 18.2 160 40-226 232-392 (393)
123 PRK03545 putative arabinose tr 98.9 6.2E-08 1.3E-12 96.5 15.8 161 42-228 223-384 (390)
124 TIGR00899 2A0120 sugar efflux 98.9 1.7E-07 3.7E-12 92.3 18.4 159 41-226 216-375 (375)
125 TIGR00893 2A0114 d-galactonate 98.8 3.4E-08 7.4E-13 97.1 12.8 172 27-219 218-394 (399)
126 TIGR00883 2A0106 metabolite-pr 98.8 7.9E-08 1.7E-12 94.8 15.2 145 34-189 229-375 (394)
127 cd06174 MFS The Major Facilita 98.8 6.8E-08 1.5E-12 93.4 13.9 165 32-220 183-348 (352)
128 PRK11273 glpT sn-glycerol-3-ph 98.8 8.9E-08 1.9E-12 97.4 15.3 170 30-221 259-432 (452)
129 PRK11663 regulatory protein Uh 98.8 9.6E-08 2.1E-12 96.7 15.4 171 36-228 255-428 (434)
130 PRK05122 major facilitator sup 98.8 2.5E-07 5.3E-12 92.3 18.0 160 37-223 229-388 (399)
131 PRK10489 enterobactin exporter 98.8 2.8E-07 6E-12 92.7 18.3 161 42-227 241-402 (417)
132 PRK09952 shikimate transporter 98.8 4.7E-07 1E-11 91.8 18.9 171 37-227 263-435 (438)
133 PRK03633 putative MFS family t 98.7 8.6E-07 1.9E-11 88.0 19.2 151 39-217 215-365 (381)
134 PRK03699 putative transporter; 98.7 3.4E-07 7.4E-12 91.3 16.2 135 38-188 219-354 (394)
135 PRK09874 drug efflux system pr 98.7 4.1E-07 8.9E-12 90.7 16.5 166 37-227 232-401 (408)
136 PRK12382 putative transporter; 98.7 6E-07 1.3E-11 89.4 17.6 159 38-223 230-388 (392)
137 COG2223 NarK Nitrate/nitrite t 98.7 1.9E-07 4.1E-12 91.0 13.2 181 23-221 217-398 (417)
138 PRK10077 xylE D-xylose transpo 98.7 1.4E-07 3.1E-12 96.3 13.2 168 46-228 293-461 (479)
139 TIGR00879 SP MFS transporter, 98.7 2E-07 4.3E-12 94.3 13.9 167 45-228 305-474 (481)
140 KOG0254 Predicted transporter 98.7 2.3E-06 5E-11 88.6 21.0 145 59-228 89-233 (513)
141 TIGR00892 2A0113 monocarboxyla 98.7 9.9E-08 2.1E-12 97.2 10.6 139 36-188 253-394 (455)
142 PRK15075 citrate-proton sympor 98.7 1.2E-06 2.6E-11 88.7 18.4 139 39-188 253-393 (434)
143 COG2814 AraJ Arabinose efflux 98.7 5.8E-07 1.3E-11 88.2 15.1 159 39-223 226-385 (394)
144 TIGR00894 2A0114euk Na(+)-depe 98.6 4.1E-07 8.9E-12 92.8 13.7 179 27-223 264-449 (465)
145 TIGR00711 efflux_EmrB drug res 98.6 7.2E-07 1.6E-11 91.2 15.1 144 34-188 265-409 (485)
146 KOG2563 Permease of the major 98.6 5.1E-06 1.1E-10 81.8 19.9 223 27-264 48-280 (480)
147 PF05631 DUF791: Protein of un 98.6 6.3E-06 1.4E-10 79.4 20.2 114 21-153 35-148 (354)
148 PRK15402 multidrug efflux syst 98.6 1.1E-06 2.4E-11 87.9 15.9 134 42-186 233-367 (406)
149 PRK15034 nitrate/nitrite trans 98.6 4.8E-07 1E-11 91.5 13.2 64 40-105 268-331 (462)
150 TIGR00896 CynX cyanate transpo 98.6 1E-06 2.2E-11 86.5 15.0 139 37-189 210-348 (355)
151 TIGR01272 gluP glucose/galacto 98.6 2.3E-05 5E-10 75.7 24.1 159 127-286 11-178 (310)
152 PRK03893 putative sialic acid 98.6 7.9E-07 1.7E-11 91.3 14.4 132 44-188 295-427 (496)
153 PRK10091 MFS transport protein 98.6 9.8E-07 2.1E-11 87.7 14.6 131 43-188 218-349 (382)
154 TIGR02718 sider_RhtX_FptX side 98.6 1.4E-06 3.1E-11 86.7 15.7 166 34-217 218-384 (390)
155 PF13347 MFS_2: MFS/sugar tran 98.6 7.7E-07 1.7E-11 89.9 13.9 153 25-190 226-385 (428)
156 TIGR00792 gph sugar (Glycoside 98.6 8E-07 1.7E-11 89.6 13.7 145 32-190 230-381 (437)
157 PRK10406 alpha-ketoglutarate t 98.6 3.7E-06 8.1E-11 85.0 18.2 126 37-173 256-382 (432)
158 PRK14995 methyl viologen resis 98.6 1.3E-06 2.8E-11 90.1 15.0 136 41-188 276-412 (495)
159 TIGR01299 synapt_SV2 synaptic 98.5 1.4E-06 3E-11 93.2 15.3 142 60-228 596-737 (742)
160 PRK09848 glucuronide transport 98.5 1.4E-06 3E-11 88.5 14.5 150 29-190 233-389 (448)
161 TIGR00900 2A0121 H+ Antiporter 98.5 1.3E-06 2.8E-11 85.2 13.7 130 45-188 232-362 (365)
162 TIGR00891 2A0112 putative sial 98.5 1.9E-06 4E-11 85.5 14.7 134 42-189 256-390 (405)
163 TIGR00712 glpT glycerol-3-phos 98.5 1.4E-06 2.9E-11 88.4 13.6 168 38-227 265-436 (438)
164 PRK11010 ampG muropeptide tran 98.5 7.2E-06 1.6E-10 84.4 19.1 162 39-221 237-400 (491)
165 PLN00028 nitrate transmembrane 98.5 1.5E-06 3.3E-11 89.0 14.0 152 43-220 271-429 (476)
166 TIGR00902 2A0127 phenyl propri 98.5 4.8E-06 1E-10 82.8 17.2 149 25-189 206-355 (382)
167 KOG4686 Predicted sugar transp 98.5 2.7E-06 5.8E-11 78.8 13.3 125 47-187 287-412 (459)
168 COG2271 UhpC Sugar phosphate p 98.5 8.6E-07 1.9E-11 86.6 10.5 168 29-221 257-431 (448)
169 KOG2816 Predicted transporter 98.5 6.7E-06 1.5E-10 83.3 17.2 257 67-354 70-393 (463)
170 PRK12307 putative sialic acid 98.5 5.4E-06 1.2E-10 83.3 16.6 131 43-188 250-382 (426)
171 PF03825 Nuc_H_symport: Nucleo 98.5 8.9E-06 1.9E-10 81.3 17.7 193 21-227 204-398 (400)
172 COG3104 PTR2 Dipeptide/tripept 98.4 6.1E-06 1.3E-10 82.4 15.7 142 33-186 30-178 (498)
173 PRK11128 putative 3-phenylprop 98.4 7.6E-06 1.6E-10 81.3 16.6 141 33-189 214-355 (382)
174 KOG0255 Synaptic vesicle trans 98.4 4.3E-06 9.3E-11 86.7 15.3 145 54-227 113-257 (521)
175 KOG0252 Inorganic phosphate tr 98.4 4.7E-05 1E-09 75.3 21.0 163 56-228 81-249 (538)
176 TIGR02332 HpaX 4-hydroxyphenyl 98.4 1.6E-06 3.5E-11 87.2 11.5 141 34-188 252-394 (412)
177 TIGR00895 2A0115 benzoate tran 98.4 2.6E-06 5.6E-11 84.1 12.8 133 37-184 263-395 (398)
178 PRK10054 putative transporter; 98.4 9E-06 1.9E-10 81.3 15.6 180 24-228 206-388 (395)
179 PF12832 MFS_1_like: MFS_1 lik 98.4 1.2E-06 2.5E-11 66.0 6.8 58 39-96 15-72 (77)
180 TIGR00882 2A0105 oligosacchari 98.4 6.5E-06 1.4E-10 82.1 13.9 165 33-222 224-393 (396)
181 PRK08633 2-acyl-glycerophospho 98.4 7E-06 1.5E-10 93.1 15.7 132 38-184 246-379 (1146)
182 PF07690 MFS_1: Major Facilita 98.3 3.1E-06 6.7E-11 82.2 10.7 138 31-180 213-352 (352)
183 PF11700 ATG22: Vacuole efflux 98.3 2.3E-05 5E-10 80.1 17.3 159 24-190 281-443 (477)
184 COG2807 CynX Cyanate permease 98.3 2.1E-05 4.6E-10 75.5 15.2 183 23-228 205-389 (395)
185 TIGR00903 2A0129 major facilit 98.3 1.5E-05 3.2E-10 79.0 14.8 144 26-187 194-340 (368)
186 KOG0569 Permease of the major 98.3 5.7E-06 1.2E-10 83.7 11.6 166 45-229 291-459 (485)
187 TIGR00710 efflux_Bcr_CflA drug 98.3 2.8E-05 6.2E-10 76.6 15.9 124 40-174 222-346 (385)
188 PRK11646 multidrug resistance 98.2 1.1E-05 2.5E-10 80.7 12.7 131 44-189 228-359 (400)
189 PRK10213 nepI ribonucleoside t 98.2 3.8E-05 8.3E-10 76.7 16.4 130 43-189 235-366 (394)
190 TIGR00926 2A1704 Peptide:H+ sy 98.2 0.00085 1.8E-08 71.2 26.7 170 44-222 7-180 (654)
191 PRK11902 ampG muropeptide tran 98.2 4.3E-05 9.3E-10 76.4 16.4 58 45-103 230-289 (402)
192 PRK06814 acylglycerophosphoeth 98.2 2.2E-05 4.8E-10 89.1 15.3 153 29-187 230-394 (1140)
193 TIGR00881 2A0104 phosphoglycer 98.2 2.1E-05 4.5E-10 77.0 13.2 143 34-188 226-371 (379)
194 PRK11195 lysophospholipid tran 98.2 0.00011 2.5E-09 73.3 18.4 127 45-186 226-353 (393)
195 PRK11102 bicyclomycin/multidru 98.2 4.5E-05 9.7E-10 75.2 15.0 55 44-99 214-269 (377)
196 KOG3626 Organic anion transpor 98.2 5.4E-05 1.2E-09 79.5 15.7 242 41-287 110-429 (735)
197 KOG2532 Permease of the major 98.1 3.6E-05 7.8E-10 78.3 13.8 179 27-226 261-449 (466)
198 PRK10473 multidrug efflux syst 98.1 3.4E-05 7.4E-10 76.7 13.5 63 45-108 224-287 (392)
199 TIGR00887 2A0109 phosphate:H+ 98.1 2.6E-05 5.6E-10 80.5 12.8 172 44-228 308-492 (502)
200 TIGR00901 2A0125 AmpG-related 98.1 3.1E-05 6.8E-10 75.9 12.7 132 34-172 219-354 (356)
201 PRK10429 melibiose:sodium symp 98.1 4.7E-05 1E-09 78.0 14.5 151 31-190 238-394 (473)
202 PF03137 OATP: Organic Anion T 98.1 3.3E-07 7.1E-12 94.9 -1.6 242 43-288 18-343 (539)
203 PRK09669 putative symporter Ya 98.1 5E-05 1.1E-09 77.0 14.2 145 34-191 239-390 (444)
204 PF00083 Sugar_tr: Sugar (and 98.1 1.8E-08 3.9E-13 102.2 -11.3 150 59-228 46-195 (451)
205 PF05977 MFS_3: Transmembrane 98.1 0.00026 5.6E-09 73.3 18.9 134 41-189 235-369 (524)
206 TIGR00886 2A0108 nitrite extru 98.1 1E-05 2.3E-10 79.3 8.2 125 39-175 240-365 (366)
207 TIGR00769 AAA ADP/ATP carrier 98.1 0.0094 2E-07 60.7 29.1 203 59-269 43-283 (472)
208 TIGR00898 2A0119 cation transp 98.0 0.00026 5.6E-09 73.0 17.2 145 55-228 354-498 (505)
209 KOG3574 Acetyl-CoA transporter 97.9 0.00023 5.1E-09 68.7 13.9 309 37-358 44-436 (510)
210 TIGR01272 gluP glucose/galacto 97.9 0.00031 6.8E-09 67.8 14.7 136 34-187 150-288 (310)
211 COG2211 MelB Na+/melibiose sym 97.8 0.0001 2.3E-09 74.0 10.5 152 27-191 239-398 (467)
212 PRK11043 putative transporter; 97.8 0.00045 9.8E-09 68.9 15.3 133 43-186 222-354 (401)
213 PRK11462 putative transporter; 97.8 0.0008 1.7E-08 68.7 17.3 142 36-190 240-388 (460)
214 PRK10133 L-fucose transporter; 97.8 0.00048 1.1E-08 69.9 14.6 117 35-168 269-387 (438)
215 KOG4686 Predicted sugar transp 97.7 0.00015 3.3E-09 67.5 8.7 284 55-357 75-419 (459)
216 COG2270 Permeases of the major 97.7 0.0019 4.1E-08 63.6 15.7 131 43-189 271-403 (438)
217 PF01306 LacY_symp: LacY proto 97.6 0.0015 3.3E-08 65.0 14.7 181 23-228 219-404 (412)
218 TIGR00788 fbt folate/biopterin 97.6 0.00056 1.2E-08 70.0 11.7 132 55-191 284-415 (468)
219 PRK11652 emrD multidrug resist 97.6 0.0018 4E-08 64.3 14.8 129 42-183 225-354 (394)
220 PRK10207 dipeptide/tripeptide 97.5 0.0033 7.2E-08 64.7 16.1 116 62-183 312-435 (489)
221 KOG2504 Monocarboxylate transp 97.5 0.0007 1.5E-08 69.8 10.3 172 25-218 299-470 (509)
222 PF06813 Nodulin-like: Nodulin 97.5 0.005 1.1E-07 57.3 15.0 117 54-180 32-148 (250)
223 KOG2533 Permease of the major 97.2 0.00036 7.8E-09 71.4 4.2 85 24-108 273-362 (495)
224 TIGR00924 yjdL_sub1_fam amino 97.2 0.014 3.1E-07 59.8 16.0 133 44-184 292-438 (475)
225 KOG3762 Predicted transporter 97.2 0.00067 1.4E-08 68.5 5.8 67 42-108 29-95 (618)
226 PRK15403 multidrug efflux syst 97.1 0.0084 1.8E-07 60.3 13.6 139 37-186 231-370 (413)
227 COG0477 ProP Permeases of the 97.0 0.053 1.2E-06 50.1 17.6 152 42-213 20-174 (338)
228 KOG0253 Synaptic vesicle trans 97.0 0.015 3.1E-07 56.6 13.2 168 33-228 86-254 (528)
229 TIGR00885 fucP L-fucose:H+ sym 96.7 0.05 1.1E-06 54.7 15.2 138 33-188 241-380 (410)
230 TIGR01301 GPH_sucrose GPH fami 96.7 0.07 1.5E-06 54.6 16.2 156 65-228 311-475 (477)
231 PRK09584 tppB putative tripept 96.7 0.054 1.2E-06 56.0 15.6 114 61-183 318-438 (500)
232 KOG0254 Predicted transporter 96.6 0.0084 1.8E-07 62.1 8.7 168 45-228 316-487 (513)
233 PF01770 Folate_carrier: Reduc 96.5 1.1 2.4E-05 44.7 25.4 128 45-188 24-154 (412)
234 PF03209 PUCC: PUCC protein; 96.3 0.28 6E-06 48.6 17.1 160 49-220 233-394 (403)
235 PF00083 Sugar_tr: Sugar (and 96.3 3.5E-05 7.5E-10 78.1 -10.6 166 46-229 275-441 (451)
236 PF13000 Acatn: Acetyl-coenzym 96.0 0.52 1.1E-05 47.9 17.0 43 139-182 131-173 (544)
237 KOG3764 Vesicular amine transp 95.7 0.022 4.8E-07 55.9 5.9 158 44-223 290-453 (464)
238 KOG0253 Synaptic vesicle trans 95.6 0.045 9.7E-07 53.3 7.8 135 66-227 388-522 (528)
239 PF03219 TLC: TLC ATP/ADP tran 95.1 4.7 0.0001 41.5 23.4 122 146-269 164-299 (491)
240 PF06963 FPN1: Ferroportin1 (F 94.7 5.4 0.00012 40.4 27.2 51 38-91 16-70 (432)
241 TIGR00805 oat sodium-independe 94.2 0.089 1.9E-06 56.0 6.3 75 29-103 335-412 (633)
242 PF05978 UNC-93: Ion channel r 94.2 2.1 4.6E-05 36.8 13.6 100 69-184 47-146 (156)
243 KOG3762 Predicted transporter 93.5 0.62 1.3E-05 47.7 10.3 149 27-190 374-523 (618)
244 KOG3098 Uncharacterized conser 93.1 4.8 0.0001 41.0 16.0 102 65-182 56-157 (461)
245 COG0738 FucP Fucose permease [ 92.1 2 4.2E-05 42.6 11.4 146 24-187 236-382 (422)
246 PF00854 PTR2: POT family; In 92.1 2 4.4E-05 42.3 12.0 115 93-221 4-120 (372)
247 PRK15462 dipeptide/tripeptide 91.0 4.7 0.0001 41.6 13.4 118 61-183 310-434 (493)
248 KOG0252 Inorganic phosphate tr 89.5 1.6 3.6E-05 44.0 8.2 137 75-228 364-501 (538)
249 PF06609 TRI12: Fungal trichot 89.3 7.9 0.00017 40.8 13.5 124 46-181 332-459 (599)
250 PF06779 DUF1228: Protein of u 89.2 2.9 6.4E-05 31.9 7.7 64 43-107 11-74 (85)
251 PF03092 BT1: BT1 family; Int 89.2 2.1 4.5E-05 43.4 9.1 131 56-191 252-382 (433)
252 PF06963 FPN1: Ferroportin1 (F 89.1 10 0.00022 38.3 13.9 125 48-182 282-411 (432)
253 KOG0255 Synaptic vesicle trans 88.7 26 0.00056 36.1 17.1 135 71-229 362-497 (521)
254 COG3202 ATP/ADP translocase [E 87.9 35 0.00075 35.0 21.9 206 55-265 57-297 (509)
255 KOG1237 H+/oligopeptide sympor 87.8 4.6 0.0001 42.4 10.8 137 43-181 56-212 (571)
256 TIGR00769 AAA ADP/ATP carrier 87.5 15 0.00031 37.7 13.9 72 134-215 274-345 (472)
257 PF07672 MFS_Mycoplasma: Mycop 85.7 1.7 3.7E-05 40.4 5.5 97 159-260 2-104 (267)
258 PRK03612 spermidine synthase; 84.1 44 0.00096 34.7 15.8 37 47-83 37-74 (521)
259 KOG3098 Uncharacterized conser 83.0 51 0.0011 33.7 15.1 114 61-178 281-403 (461)
260 KOG2563 Permease of the major 81.6 1.4 3E-05 44.3 3.3 100 55-163 297-396 (480)
261 KOG3810 Micronutrient transpor 76.7 35 0.00075 33.6 10.9 48 140-188 108-155 (433)
262 KOG4332 Predicted sugar transp 76.0 2.3 5E-05 39.9 2.8 50 45-94 58-107 (454)
263 KOG2816 Predicted transporter 73.2 24 0.00051 36.1 9.6 123 50-188 266-391 (463)
264 PF03219 TLC: TLC ATP/ADP tran 69.7 48 0.001 34.2 10.9 74 134-217 290-363 (491)
265 KOG2615 Permease of the major 64.0 54 0.0012 32.7 9.3 128 48-189 284-414 (451)
266 PF12832 MFS_1_like: MFS_1 lik 57.7 65 0.0014 23.8 7.0 61 257-323 7-67 (77)
267 TIGR00939 2a57 Equilibrative N 55.8 1.7E+02 0.0037 29.7 11.9 56 129-185 375-430 (437)
268 KOG1479 Nucleoside transporter 54.3 96 0.0021 31.0 9.4 25 34-58 28-53 (406)
269 COG3104 PTR2 Dipeptide/tripept 52.6 1.5E+02 0.0034 30.4 10.7 115 61-180 326-447 (498)
270 KOG3810 Micronutrient transpor 49.8 1.1E+02 0.0023 30.3 8.6 37 58-94 270-306 (433)
271 COG3202 ATP/ADP translocase [E 49.1 1.9E+02 0.0041 29.8 10.7 77 134-220 292-369 (509)
272 PTZ00207 hypothetical protein; 46.9 1.9E+02 0.0041 30.7 10.8 141 64-221 396-549 (591)
273 KOG2325 Predicted transporter/ 44.8 13 0.00028 38.1 1.8 51 135-186 397-447 (488)
274 TIGR00880 2_A_01_02 Multidrug 44.3 1.5E+02 0.0033 23.1 8.3 30 62-91 90-119 (141)
275 COG5336 Uncharacterized protei 41.6 1.1E+02 0.0024 24.4 6.0 38 153-190 32-69 (116)
276 PRK10527 hypothetical protein; 37.3 2.3E+02 0.0051 23.2 9.4 26 88-113 2-27 (125)
277 PF11947 DUF3464: Protein of u 37.0 90 0.0019 26.7 5.4 36 141-178 110-145 (153)
278 TIGR00806 rfc RFC reduced fola 36.8 2.9E+02 0.0064 28.6 9.9 121 40-173 278-399 (511)
279 PF00032 Cytochrom_B_C: Cytoch 35.8 1.1E+02 0.0025 23.8 5.6 59 46-104 16-75 (102)
280 PF13000 Acatn: Acetyl-coenzym 35.2 5.4E+02 0.012 26.8 12.3 55 134-189 413-467 (544)
281 PF02487 CLN3: CLN3 protein; 33.0 5.2E+02 0.011 25.9 15.1 43 135-183 121-163 (402)
282 COG5336 Uncharacterized protei 29.0 1.1E+02 0.0023 24.4 4.2 26 70-95 53-78 (116)
283 KOG1330 Sugar transporter/spin 28.8 75 0.0016 32.4 4.2 109 55-173 279-395 (493)
284 PF01770 Folate_carrier: Reduc 28.7 5.7E+02 0.012 25.8 10.4 38 56-93 282-319 (412)
285 PF13073 DUF3937: Protein of u 24.7 1E+02 0.0023 21.9 3.1 37 247-283 2-38 (73)
286 PF02487 CLN3: CLN3 protein; 24.2 3.9E+02 0.0085 26.8 8.3 50 136-186 345-394 (402)
287 COG3088 CcmH Uncharacterized p 24.1 1.1E+02 0.0024 26.0 3.7 28 382-409 102-129 (153)
288 cd01324 cbb3_Oxidase_CcoQ Cyto 22.3 2.4E+02 0.0051 18.9 4.4 39 381-419 7-45 (48)
289 KOG3097 Predicted membrane pro 22.2 4.8E+02 0.01 25.7 8.0 55 55-110 306-361 (390)
290 COG3493 CitS Na+/citrate sympo 20.9 1.3E+02 0.0028 29.7 4.0 46 47-93 189-236 (438)
291 KOG2601 Iron transporter [Inor 20.9 8.7E+02 0.019 24.5 13.7 71 24-94 27-98 (503)
292 COG0679 Predicted permeases [G 20.8 7.4E+02 0.016 23.6 13.8 24 238-261 157-180 (311)
293 PF03137 OATP: Organic Anion T 20.8 33 0.00071 35.9 0.0 61 27-87 308-370 (539)
294 PF05545 FixQ: Cbb3-type cytoc 20.2 2.6E+02 0.0057 18.5 4.4 24 395-418 20-43 (49)
No 1
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.3e-62 Score=484.92 Aligned_cols=382 Identities=20% Similarity=0.274 Sum_probs=317.1
Q ss_pred CCCCCCCceeeeeeeccchhHHHHHHHHHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhc----ccCCch
Q 014600 16 SFTQPVGRWSVLYYGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELID----RFGHFK 90 (422)
Q Consensus 16 ~~~~~l~~~~~~~y~~g~~~~~~~~~~~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsD----r~Grrr 90 (422)
+.++|++.+||++||.||++.++.+.....|+++||||+ |+|++.+|.++++.|++||+.||++|.++| ||||||
T Consensus 4 ~~~~kLs~~eki~Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfR 83 (467)
T COG2211 4 SSSKKLSLKEKIGYGLGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFR 83 (467)
T ss_pred cccCcccHHHHHhhcchhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeeccccccccccc
Confidence 346789999999999999999999999999999999999 999999999999999999999999999999 599999
Q ss_pred hHHHHHHHHHHHHHHHhhcCccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHH
Q 014600 91 IWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNA 170 (422)
Q Consensus 91 p~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~ 170 (422)
||+++|+++.++..+++|.+ | +++...+..|.+++|+ +++++|+++++||.|+.+++|+|++||.+++++|+.
T Consensus 84 P~lL~g~ip~~i~~~l~F~~--p-~~~~~~k~~ya~vtY~----l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~ 156 (467)
T COG2211 84 PWLLWGAIPFAIVAVLLFIT--P-DFSMTGKLIYALVTYM----LLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMV 156 (467)
T ss_pred HHHHHHhHHHHHHHHHHHcC--C-CcccCcchHHHHHHHH----HHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHH
Confidence 99999999999999999963 4 2333455666666665 799999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCCCCchHHHHHHHHHHHHHHHHHHHhhhhccccCccccccc-C--CCcchhhhHHHHH
Q 014600 171 FTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGL-R--GNSHARISWAYWF 247 (422)
Q Consensus 171 ~~~ig~~l~~~~~~~l~~~~~~~g~~~~~~~~~~~~~i~~~i~~i~~~i~~~~~~E~~~~~~~-~--~~~~~~~~~~~~~ 247 (422)
++++|+++...+.+|++..++ .+|...||+..+.+.++++++..+.|++.+|||+.+..+ + ++.+.++++..++
T Consensus 157 ~~~~g~~l~~~~~~plv~~~g---~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~~~~~~~~~~~~~~~~~ 233 (467)
T COG2211 157 FASLGGLLVAVLFPPLVKLFG---GGDKALGYQGTALVLGVIGVILLLFCFFNVKERVVETQPTKTGVKLKLKDSFLLIF 233 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHhC---CCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccCccccCcccccccHHHHHHHHH
Confidence 999999999999999998765 244578999999999999999999999999999864332 2 3556677788899
Q ss_pred HhHHHHHHHHHHHHHHHHHHhhh---HHHHHHhhhccCccchhH------h---HHHHH-----------HHHHHHHHHH
Q 014600 248 KKILYYQVALVYMLTRLVVNVSQ---AYLAFYVINDLRMGQSAK------A---LVPAI-----------IYICSFIVSI 304 (422)
Q Consensus 248 ~n~~f~~~~~~~~~~~~~~~~~~---~y~~~y~~~~~~l~~~~~------~---~iP~~-----------~~~~~~~~~~ 304 (422)
|||+++.+++.+++...+.+... .||..|+.++.++.+... + ..+.+ ++..+.++..
T Consensus 234 ~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~ 313 (467)
T COG2211 234 KNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLA 313 (467)
T ss_pred ccchHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHH
Confidence 99999988888888777665444 455555554444333221 0 01111 1222222211
Q ss_pred HHH-------------------HH-----------------HhhhhhhhhcCccccccceehhhHHHHHHHHHHHHHHHH
Q 014600 305 LLQ-------------------VT-----------------GISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQ 348 (422)
Q Consensus 305 ~~~-------------------v~-----------------~~~~~~~~~g~r~~g~~~~~s~~~~~~K~~~a~~~~i~g 348 (422)
++. +. ..+.+|++||+|+||. +||.++|.+|+|++++..+.|
T Consensus 314 i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi--~~s~~tF~~K~g~ala~~~~g 391 (467)
T COG2211 314 VGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGI--VYSGMTFFRKLGLALAGFIPG 391 (467)
T ss_pred HHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhh--HHHHHHHHHHHHHHHHHHHHH
Confidence 111 00 1345899999999999 999999999999999999999
Q ss_pred HhHhhCCCccCCCCcccccccccCCCccchHHHHHHHHHHhhHhHHHHHHHHHHHHhccCCCcCchhhhhhhcC
Q 014600 349 SYQSMSPTVLDNNSSITSLTVLDNNSLISTSYISVTRFGLGLIPAICSLVSVAVTFTMKLHTPYSKPLVEPLLQ 422 (422)
Q Consensus 349 ~~l~~~Gy~~~~~~~~~~~~~~~~~~~q~~~~~~~i~~~~~~~P~i~~l~~~~~~~~y~l~~~~~~~i~~~l~~ 422 (422)
++|+..||+++. ++|+++++++|+.++.++|+++.+++++.+.+||+|+|+|++|+|||.|
T Consensus 392 ~~L~~~Gyv~~~-------------~~Q~~~al~gI~~~~~~~Pa~l~l~~~i~~~~y~L~~~~~~~I~~eL~~ 452 (467)
T COG2211 392 WILGAIGYVPNV-------------SAQSASALFGIRFLFIILPALLLLLAAIIIFFYKLNEKMHKEIIEELEQ 452 (467)
T ss_pred HHHHHcCCCCCc-------------ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHH
Confidence 999999999962 3799999999999999999999999999999999999999999999976
No 2
>PRK11462 putative transporter; Provisional
Probab=100.00 E-value=4.8e-55 Score=444.13 Aligned_cols=377 Identities=15% Similarity=0.198 Sum_probs=302.1
Q ss_pred CCCCceeeeeeeccchhHHHHHHHHHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhc----ccCCchhHH
Q 014600 19 QPVGRWSVLYYGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELID----RFGHFKIWH 93 (422)
Q Consensus 19 ~~l~~~~~~~y~~g~~~~~~~~~~~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsD----r~Grrrp~l 93 (422)
+++++++|++||+||++.++.+.+...|+++||||+ |++++.+|++++++|+||+++||++|+++| ||||||||+
T Consensus 4 ~~l~~~~k~~Yg~g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~i 83 (460)
T PRK11462 4 EVLSVKEKIGYGMGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWV 83 (460)
T ss_pred CcccHhHHHhhccchhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhH
Confidence 579999999999999999999999999999999999 999999999999999999999999999999 599999999
Q ss_pred HHHHHHHHHHHHHhhcCccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHH
Q 014600 94 GAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTM 173 (422)
Q Consensus 94 l~g~i~~~i~~~~lf~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ 173 (422)
++|+++.+++++++|. .| ++++ ....+++.+..+++.++|++.++||.++.+|+++|+|||++++++|+.++.
T Consensus 84 l~g~i~~~i~~~llf~--~p-~~s~----~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~ 156 (460)
T PRK11462 84 LFGALPFGIVCVLAYS--TP-DLSM----NGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLAT 156 (460)
T ss_pred hHHHHHHHHHHHHHHh--CC-CCCc----chHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 9999999999999985 35 2222 222334444445789999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhccCCCCCchHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccCCCcchhhhHHHHHHhHHHH
Q 014600 174 VANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKKILYY 253 (422)
Q Consensus 174 ig~~l~~~~~~~l~~~~~~~g~~~~~~~~~~~~~i~~~i~~i~~~i~~~~~~E~~~~~~~~~~~~~~~~~~~~~~n~~f~ 253 (422)
+|..+++.+..|++..++ .++...+|+..+.+++++++++.+++++.+||++.++ +++.+.++.++.++|||+++
T Consensus 157 iG~~~~~~~~~plv~~~g---~~~~~~g~~~~~~i~~ii~~i~~~i~~~~~kE~~~~~--~~~~~~~~~l~~~~~Nk~~~ 231 (460)
T PRK11462 157 AGGMLSTVLMMPLVNLIG---GDNKPLGFQGGIAVLSVVAFMMLAFCFFTTKERVEAP--PTTTSMREDLRDIWQNDQWR 231 (460)
T ss_pred HHHHHHHHHHHHHHHHhC---CCchhhhHHHHHHHHHHHHHHHHHHHHhcceeccCCC--ccCCCHHHHHHHHhCChHHH
Confidence 999998888888876653 2234568999999999999999999999999975432 23445788899999999998
Q ss_pred HHHHHHHHHHH---HHHhhhHHHHHHhhhccCccchhHh--HH------HHHH-----------HHHH-------HHHHH
Q 014600 254 QVALVYMLTRL---VVNVSQAYLAFYVINDLRMGQSAKA--LV------PAII-----------YICS-------FIVSI 304 (422)
Q Consensus 254 ~~~~~~~~~~~---~~~~~~~y~~~y~~~~~~l~~~~~~--~i------P~~~-----------~~~~-------~~~~~ 304 (422)
.++..+++... ..++...|+++|+.++.+....... .+ ++.. +..+ .+..+
T Consensus 232 ~l~~~~~~~~~~~~~~~~~~~y~~~y~~g~~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~ 311 (460)
T PRK11462 232 IVGLLTIFNILAVCVRGGAMMYYVTWILGTPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMF 311 (460)
T ss_pred HHHHHHHHHHHHHHHHHhHhhhhhhhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHH
Confidence 77655554433 3456778999998766443222110 00 1100 0000 00000
Q ss_pred HHH------------HH-----------------HhhhhhhhhcCccccccceehhhHHHHHHHHHHHHHHHHHhHhhCC
Q 014600 305 LLQ------------VT-----------------GISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSYQSMSP 355 (422)
Q Consensus 305 ~~~------------v~-----------------~~~~~~~~~g~r~~g~~~~~s~~~~~~K~~~a~~~~i~g~~l~~~G 355 (422)
+.+ +. ..+.+|+++|+|+||. +++.++|.+|+|+++|+++.|.+|+..|
T Consensus 312 ~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~--~~a~~~f~~Klg~alg~~i~g~iL~~~G 389 (460)
T PRK11462 312 FVPMQASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGI--SFAGTLFVLKLGLAFGGALIGWMLAYGG 389 (460)
T ss_pred HhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHH--HHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 000 00 1233688999999999 9999999999999999999999999999
Q ss_pred CccCCCCcccccccccCCCccchHHHHHHHHHHhhHhHHHHHHHHHHH-HhccCCCcCchhhhhhhcC
Q 014600 356 TVLDNNSSITSLTVLDNNSLISTSYISVTRFGLGLIPAICSLVSVAVT-FTMKLHTPYSKPLVEPLLQ 422 (422)
Q Consensus 356 y~~~~~~~~~~~~~~~~~~~q~~~~~~~i~~~~~~~P~i~~l~~~~~~-~~y~l~~~~~~~i~~~l~~ 422 (422)
|+++ ..+|+++++.+++.+++++|+++.+++++++ ++||+|||+|+|+++||.|
T Consensus 390 y~~~-------------~~~q~~~~~~~i~~~~~~~P~~~~~~~~~~~~~~y~l~~~~~~~i~~~l~~ 444 (460)
T PRK11462 390 YDAA-------------EKAQNSATISIIIALFTIVPAICYLLSAIIAKRYYSLTTHNLKTVMEQLAQ 444 (460)
T ss_pred CCCC-------------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHH
Confidence 9974 2569999999999999999999999999887 5789999999999999853
No 3
>PRK10429 melibiose:sodium symporter; Provisional
Probab=100.00 E-value=1e-51 Score=421.71 Aligned_cols=376 Identities=15% Similarity=0.184 Sum_probs=294.8
Q ss_pred CCCceeeeeeeccchhHHHHHHHHHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhc----ccCCchhHHH
Q 014600 20 PVGRWSVLYYGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELID----RFGHFKIWHG 94 (422)
Q Consensus 20 ~l~~~~~~~y~~g~~~~~~~~~~~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsD----r~Grrrp~ll 94 (422)
|++.++|++||+||++.++.+.+..+|+++||||+ |++++.+|.++++++++|+++||++|+++| ||||||||++
T Consensus 2 ~l~~~~~~~yg~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il 81 (473)
T PRK10429 2 SISMTTKLSYGFGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWIL 81 (473)
T ss_pred CCchhHHHhhccchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHh
Confidence 67899999999999999999999999999999999 999999999999999999999999999999 6899999999
Q ss_pred HHHHHHHHHHHHhhcCccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHH
Q 014600 95 AGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMV 174 (422)
Q Consensus 95 ~g~i~~~i~~~~lf~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~i 174 (422)
++.++.+++++++|.+ | ++ +..+.++++.+..++++++|+++++||.++.+|+++|++||++++++|..+.++
T Consensus 82 ~g~i~~~i~~~llf~~--p-~~----~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~i 154 (473)
T PRK10429 82 IGTLANSVVLFLLFSA--H-LF----EGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASL 154 (473)
T ss_pred hhhHHHHHHHHHHHcC--C-CC----CccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHH
Confidence 9999999998888852 4 21 122223344444457899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhccCCCCCchHHHHHHHHHHHHHHHHHHHhhhhccccCccccc----ccCCCcchhhhHHHHHHhH
Q 014600 175 ANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKM----GLRGNSHARISWAYWFKKI 250 (422)
Q Consensus 175 g~~l~~~~~~~l~~~~~~~g~~~~~~~~~~~~~i~~~i~~i~~~i~~~~~~E~~~~~----~~~~~~~~~~~~~~~~~n~ 250 (422)
|+++++.+..|++..++ ..+...+|++.+.+.+++.+++.+++++.+||++.++ +++++.+.++.++.++|||
T Consensus 155 g~~~~~~~~~~~~~~~g---~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~n~ 231 (473)
T PRK10429 155 AGFVTAGFTLPFVNYVG---GGDRGFGFQMFTLVLIAFFIVSTIITLRNVHEVYSSDNQVSAEGSHLTLKDIVALIYKND 231 (473)
T ss_pred HHHHHHHHHHHHHHHhC---CCchhhhHHHHHHHHHHHHHHHHHHHHcCceecCCccccccccccCCCHHHHHHHHhcCH
Confidence 88887777777765543 1234568999999998998888889999999975321 1233456788888999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHhhhccCccchh---Hh--------HHHHHH-----------HH-------HHHH
Q 014600 251 LYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSA---KA--------LVPAII-----------YI-------CSFI 301 (422)
Q Consensus 251 ~f~~~~~~~~~~~~~~~~~~~y~~~y~~~~~~l~~~~---~~--------~iP~~~-----------~~-------~~~~ 301 (422)
+++.+++..++.+...+....+.++|.....+..... .. ..|.+. +. ++.+
T Consensus 232 ~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~ 311 (473)
T PRK10429 232 QLSCLLGMALAYNIASNIINGFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCG 311 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHhhheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHH
Confidence 9988877777766665555555554444333322111 00 111110 01 1111
Q ss_pred HHHHH----H----------H-----------HH-------hhhhhhhhcCccccccceehhhHHHHHHHHHHHHHHHHH
Q 014600 302 VSILL----Q----------V-----------TG-------ISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQS 349 (422)
Q Consensus 302 ~~~~~----~----------v-----------~~-------~~~~~~~~g~r~~g~~~~~s~~~~~~K~~~a~~~~i~g~ 349 (422)
..+.. . + .. .+.+|+++|+|+||. ++|.+++.+|+|++++..+.|+
T Consensus 312 ~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~--~~s~~~~~~K~~~al~~~i~g~ 389 (473)
T PRK10429 312 VLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESI--AYSVQTMVVKGGSAFAAFFIGV 389 (473)
T ss_pred HHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhH--HHHHHHHHHHHHHHHHHHHHHH
Confidence 11000 0 0 00 222578999999999 9999999999999999999999
Q ss_pred hHhhCCCccCCCCcccccccccCCCccchHHHHHHHHHHhhHhHHHHHHHHHHH-HhccCCCcCchhhhhhhc
Q 014600 350 YQSMSPTVLDNNSSITSLTVLDNNSLISTSYISVTRFGLGLIPAICSLVSVAVT-FTMKLHTPYSKPLVEPLL 421 (422)
Q Consensus 350 ~l~~~Gy~~~~~~~~~~~~~~~~~~~q~~~~~~~i~~~~~~~P~i~~l~~~~~~-~~y~l~~~~~~~i~~~l~ 421 (422)
+++..||+++ .+|+++++++++.++.++|+++.+++++++ ++||+|||+|+|++|||.
T Consensus 390 ~l~~~Gy~~~--------------~~q~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~y~l~~~~~~~i~~~l~ 448 (473)
T PRK10429 390 VLGLIGYVPN--------------VEQSAQTLLGMQFIMIGLPTLFFMITLVLYFRYYRLNGDFLRRIQIHLL 448 (473)
T ss_pred HHHHcCCCCC--------------CcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHheeCCHHHHHHHHHHHH
Confidence 9999999974 469999999999999999999999998876 699999999999999985
No 4
>PRK09669 putative symporter YagG; Provisional
Probab=100.00 E-value=1.5e-51 Score=417.48 Aligned_cols=379 Identities=17% Similarity=0.188 Sum_probs=298.2
Q ss_pred CCCCCceeeeeeeccchhHHHHHHHHHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcc----cCCchhH
Q 014600 18 TQPVGRWSVLYYGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDR----FGHFKIW 92 (422)
Q Consensus 18 ~~~l~~~~~~~y~~g~~~~~~~~~~~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr----~Grrrp~ 92 (422)
++|+++++|++||+||++.+..+.....|+++||+|+ |+|++.+|.++++.+++|+++||++|+++|| |||||||
T Consensus 3 ~~~l~~~~~~~yg~g~~~~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~ 82 (444)
T PRK09669 3 TSQLTTKDKIGYGLGDTACNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPY 82 (444)
T ss_pred CCcccHHHHHhhcchhhhhhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchh
Confidence 3579999999999999999999999999999999998 9999999999999999999999999999995 9999999
Q ss_pred HHHHHHHHHHHHHHhhcCccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHH
Q 014600 93 HGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFT 172 (422)
Q Consensus 93 ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~ 172 (422)
++++.++.++++.++|+ .| +++ .....+++.+..++++++|++.++||.++.+|+++|++||++++++|..+.
T Consensus 83 il~~~~~~~i~~~l~f~--~p-~~~----~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~ 155 (444)
T PRK09669 83 LLWFAIPFGVVCLLTFY--TP-DFG----ATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALS 155 (444)
T ss_pred HHHHHHHHHHHHHHHHh--CC-CCC----cchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHH
Confidence 99999999999888775 35 221 111223333334578889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCCchHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccCCCcchhhhHHHHHHhHHH
Q 014600 173 MVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKKILY 252 (422)
Q Consensus 173 ~ig~~l~~~~~~~l~~~~~~~g~~~~~~~~~~~~~i~~~i~~i~~~i~~~~~~E~~~~~~~~~~~~~~~~~~~~~~n~~f 252 (422)
++|+.+++.+..|+...++ .++.+.+|+..+.+.+++++++.+++++.+||++.++ ++++.+.++++++++|||++
T Consensus 156 ~~G~~i~~~~~~pl~~~~~---~~~~~~g~~~~~~i~~ii~~v~~~~~~~~~~e~~~~~-~~~~~~~~~~~~~~~~n~~~ 231 (444)
T PRK09669 156 FIGGLIVSVIALPLVDILG---KGDEQKGYFYAMMVMGLLGVVLFFCCFFMTKERYTPE-VDNSSSVWKDLKLLLGNSQW 231 (444)
T ss_pred HHHHHHHHHHHHHHHHHhC---CCchhhhHHHHHHHHHHHHHHHHHHHhCCeEEecCCC-CcCCCCHHHHHHHHhCCchH
Confidence 9999998888888877653 1234578999999999998888888899999975433 23344567888999999999
Q ss_pred HHHHHHHHHHHHHHH---hhhHHHHHHhhhccCccchhH--------hHHHHHH-----------HHHHHH-------HH
Q 014600 253 YQVALVYMLTRLVVN---VSQAYLAFYVINDLRMGQSAK--------ALVPAII-----------YICSFI-------VS 303 (422)
Q Consensus 253 ~~~~~~~~~~~~~~~---~~~~y~~~y~~~~~~l~~~~~--------~~iP~~~-----------~~~~~~-------~~ 303 (422)
+.++..+++...+.. ....|+..|+.++.+...... ...|++. +..+.+ ..
T Consensus 232 ~~l~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~ 311 (444)
T PRK09669 232 RIMFIFNVVLLTAVVTRGGATLYYVNYVLLRPDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALI 311 (444)
T ss_pred HHHHHHHHHHHHHHHHHhhhhheeeeeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHH
Confidence 887766666544443 444555555544322222111 0112110 010110 00
Q ss_pred HHH---H---------HHH-----------------hhhhhhhhcCccccccceehhhHHHHHHHHHHHHHHHHHhHhhC
Q 014600 304 ILL---Q---------VTG-----------------ISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSYQSMS 354 (422)
Q Consensus 304 ~~~---~---------v~~-----------------~~~~~~~~g~r~~g~~~~~s~~~~~~K~~~a~~~~i~g~~l~~~ 354 (422)
++. + +.+ .+.+|+++|+|+||. ++|.+++++|+|+++|+.+.|.+++..
T Consensus 312 ~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~--~~s~~~~~~klg~alg~~i~g~ll~~~ 389 (444)
T PRK09669 312 FFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGL--VFSTNLFAIKLGLAIGGAVVGWILAWV 389 (444)
T ss_pred HHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchH--HHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 000 0 000 223688999999999 999999999999999999999999999
Q ss_pred CCccCCCCcccccccccCCCccchHHHHHHHHHHhhHhHHHHHHHHHHHHhccCCCcCchhhhhhhcC
Q 014600 355 PTVLDNNSSITSLTVLDNNSLISTSYISVTRFGLGLIPAICSLVSVAVTFTMKLHTPYSKPLVEPLLQ 422 (422)
Q Consensus 355 Gy~~~~~~~~~~~~~~~~~~~q~~~~~~~i~~~~~~~P~i~~l~~~~~~~~y~l~~~~~~~i~~~l~~ 422 (422)
||+++ +++|+++++++++.+++++|+++.+++++++++||+|||+|+|+++||.+
T Consensus 390 Gy~~~-------------~~~q~~~~~~~i~~~~~~~p~~~~~~~~~~~~~y~l~~~~~~~i~~~l~~ 444 (444)
T PRK09669 390 DYVGG-------------AAVQSASVLTTINLLFTVIPGVLFAGMAIILNFYKLNDARVEAIAQELVK 444 (444)
T ss_pred CCCCC-------------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHhC
Confidence 99875 25799999999999999999999999999999999999999999999864
No 5
>PF13347 MFS_2: MFS/sugar transport protein
Probab=100.00 E-value=7.2e-49 Score=395.94 Aligned_cols=363 Identities=25% Similarity=0.339 Sum_probs=289.8
Q ss_pred eeeeeeccchhHHHHHHHHHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhc----ccCCchhHHHHHHHH
Q 014600 25 SVLYYGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELID----RFGHFKIWHGAGSVL 99 (422)
Q Consensus 25 ~~~~y~~g~~~~~~~~~~~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsD----r~Grrrp~ll~g~i~ 99 (422)
++++|++|+++.++.+.....|+++||+|+ |+++..+|.++.+++++|++.||++|+++| ||||||||+++|+++
T Consensus 2 ~~~ay~~g~~~~~~~~~~~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~ 81 (428)
T PF13347_consen 2 KKLAYGIGDLGYNMIWSLLSSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAIL 81 (428)
T ss_pred cEEEeeHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHH
Confidence 567899999999999999999999999999 999999999999999999999999999999 799999999999999
Q ss_pred HHHHHHHhhcCccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHH
Q 014600 100 VAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSL 179 (422)
Q Consensus 100 ~~i~~~~lf~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~ 179 (422)
.+++++++|.+ .|.++++.. ..+++.+..++++++|++.++||.++.+|+++|++||++++++|+.+..+|+++.
T Consensus 82 ~~~~~~llf~~-~p~~~~~~~----~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~ 156 (428)
T PF13347_consen 82 LALSFFLLFSP-PPAGLSFTA----KLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLA 156 (428)
T ss_pred HHHHHHHhhcc-ccchhhhhh----HHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHH
Confidence 99999999852 243332222 2233334445789999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHhhccCCCCCchHHHHHHHHHHHHHHHHHHHhhhhccccCccc-ccccCCCcchhhhHHHHHHhHHHHHHHHH
Q 014600 180 YAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRL-KMGLRGNSHARISWAYWFKKILYYQVALV 258 (422)
Q Consensus 180 ~~~~~~l~~~~~~~g~~~~~~~~~~~~~i~~~i~~i~~~i~~~~~~E~~~-~~~~~~~~~~~~~~~~~~~n~~f~~~~~~ 258 (422)
+.+.++++..+++ ++...+|++.+.+.+++++++.+++++.+||++. +++++++.+.++.+++++|||+++++...
T Consensus 157 ~~~~~~l~~~~g~---~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke~~~~~~~~~~~~~~~~~~~~~~~nr~~~~l~~~ 233 (428)
T PF13347_consen 157 SFLAPILVSWFGG---GDTSNGYRWMALVLAIVGLVFFLITFFFVKERSVEVTEQEKKISLRDSLRSLFRNRPFRILLLA 233 (428)
T ss_pred HHHhhhhhhhhcc---CccchHHHHHHHHHHHHHHHHhhhhhheeeeccccccccccccccccchhhhcccchHHHHHHH
Confidence 8888777766542 2222489999999999999999999999999432 22334556788999999999999988888
Q ss_pred HHHHHHHHH---hhhHHHHHHhhhccCccchhHh--------HHHHHH-----------H-------HHHHHH-HHHH--
Q 014600 259 YMLTRLVVN---VSQAYLAFYVINDLRMGQSAKA--------LVPAII-----------Y-------ICSFIV-SILL-- 306 (422)
Q Consensus 259 ~~~~~~~~~---~~~~y~~~y~~~~~~l~~~~~~--------~iP~~~-----------~-------~~~~~~-~~~~-- 306 (422)
+++.+.+.. ....|+..|+.++.+..+.... ..|++. + ..+.+. .++.
T Consensus 234 ~~~~~~~~~~~~~~~~y~~~~vl~~~~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~ 313 (428)
T PF13347_consen 234 FFLQWLAFALMNTFLPYYFTYVLGNEGLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGPG 313 (428)
T ss_pred HHHHHhhhhhhhhHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHhh
Confidence 887666554 4455666666555543332211 122211 0 111111 1111
Q ss_pred H---------HHH-----------------hhhhhhhhcCccccccceehhhHHHHHHHHHHHHHHHHHhHhhCCCccCC
Q 014600 307 Q---------VTG-----------------ISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSYQSMSPTVLDN 360 (422)
Q Consensus 307 ~---------v~~-----------------~~~~~~~~g~r~~g~~~~~s~~~~~~K~~~a~~~~i~g~~l~~~Gy~~~~ 360 (422)
+ +.+ .+.+|+++|+|+||. ++|++++.+|++++++..+.+.+|+..||+++
T Consensus 314 ~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~--~~s~~~~~~k~~~~la~~i~g~~l~~~Gy~~~- 390 (428)
T PF13347_consen 314 SPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGM--YFSVNSFFIKIGQGLAGAIVGLLLALVGYDAN- 390 (428)
T ss_pred hHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHH--HHHhhhhhhHHHHHHHHHHHHHHHHHhCcCCC-
Confidence 1 001 233789999999999 99999999999999999999999999999986
Q ss_pred CCcccccccccCCCccchHHHHHHHHHHhhHhHHHHHHHHHHHHhccCCC
Q 014600 361 NSSITSLTVLDNNSLISTSYISVTRFGLGLIPAICSLVSVAVTFTMKLHT 410 (422)
Q Consensus 361 ~~~~~~~~~~~~~~~q~~~~~~~i~~~~~~~P~i~~l~~~~~~~~y~l~~ 410 (422)
.+.|+++++.+++.++.++|+++.+++++++++||+||
T Consensus 391 ------------~~~q~~~~~~~i~~~~~~~p~~~~~~~~i~~~~y~l~~ 428 (428)
T PF13347_consen 391 ------------AAVQSASALSGIRILFSIVPAIFLLLAIIFMRFYPLTR 428 (428)
T ss_pred ------------cCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCC
Confidence 35799999999999999999999999999999999997
No 6
>PRK09848 glucuronide transporter; Provisional
Probab=100.00 E-value=1.8e-45 Score=373.26 Aligned_cols=378 Identities=17% Similarity=0.230 Sum_probs=287.7
Q ss_pred CCCCCceeeeeeeccchhHHHHHHHHHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcc----cCCchhH
Q 014600 18 TQPVGRWSVLYYGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDR----FGHFKIW 92 (422)
Q Consensus 18 ~~~l~~~~~~~y~~g~~~~~~~~~~~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr----~Grrrp~ 92 (422)
.+|+++++|++||+||+++++.+.+..+|+++|++|+ |+++.++|.++++.+++|++.||++|+++|| +||||||
T Consensus 2 ~~~~~~~~~~~yg~g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~ 81 (448)
T PRK09848 2 NQQLSWRTIVGYSLGDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPF 81 (448)
T ss_pred CCcccHHHHHhhccchHHhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHH
Confidence 4679999999999999999999999999999999998 9999999999999999999999999999996 6999999
Q ss_pred HHHHHHHHHHHHHHhhcCccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHH
Q 014600 93 HGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFT 172 (422)
Q Consensus 93 ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~ 172 (422)
++++.++..+...++|. .|..+.+.. ..+++.....++++++++.++|+.++.+++++|++||++++++|..+.
T Consensus 82 ~~~~~~~~~~~~~~~~~--~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~ 155 (448)
T PRK09848 82 LLFGTAPLMIFSVLVFW--VPTDWSHSS----KVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAA 155 (448)
T ss_pred HHHHHHHHHHHHHHHHh--CcCCCCcch----HHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHH
Confidence 99999988887777764 242222111 122223333468899999999999999999999999999999999887
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCCchHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccCCCcchhhhHHHHHHhHHH
Q 014600 173 MVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKKILY 252 (422)
Q Consensus 173 ~ig~~l~~~~~~~l~~~~~~~g~~~~~~~~~~~~~i~~~i~~i~~~i~~~~~~E~~~~~~~~~~~~~~~~~~~~~~n~~f 252 (422)
.++........+|++.... | ++...+|.....+.+++++++.++++..+||++.++ +++.+.++.+++++|||++
T Consensus 156 ~~~~~~~~~~~~p~i~~~~--g-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~e~~~~~--~~~~~~~~~~~~l~~n~~f 230 (448)
T PRK09848 156 SLTFVCLAFLIGPSIKNSS--P-EEMVSVYHFWTIVLAIAGMVLYFICFKSTRENVVRI--VAQPSLKISLQTLKRNRPL 230 (448)
T ss_pred HHHHHHHHHHHHHHHHHhC--C-CchhhhHHHHHHHHHHHHHHHHHHHHcCcEeccCCC--ccCCCHHHHHHHHhCCchH
Confidence 7766555555556665331 1 122234544445666777777777788889875432 2234567778999999999
Q ss_pred HHHHHHHHHHHHHHHhhhHHHHHHhhhccCccchhHh--HH----------HHHH-----------HHHHHHH-------
Q 014600 253 YQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKA--LV----------PAII-----------YICSFIV------- 302 (422)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~y~~~y~~~~~~l~~~~~~--~i----------P~~~-----------~~~~~~~------- 302 (422)
+...+..++...+......+.++|.++..+.++.... .. |.+. +..+.++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~ 310 (448)
T PRK09848 231 FMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLL 310 (448)
T ss_pred HHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHH
Confidence 8877777776666666666677777776665443211 11 1100 0111111
Q ss_pred HHHH---H---------HHH-----------------hhhhhhhhcCccccccceehhhHHHHHHHHHHHHHHHHHhHhh
Q 014600 303 SILL---Q---------VTG-----------------ISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSYQSM 353 (422)
Q Consensus 303 ~~~~---~---------v~~-----------------~~~~~~~~g~r~~g~~~~~s~~~~~~K~~~a~~~~i~g~~l~~ 353 (422)
..+. . +.+ .+.+|+++|+|+||. ++|.+++.+|+|+++|..+.+.+++.
T Consensus 311 ~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~--~~~~~~~~~klg~aig~~i~g~~l~~ 388 (448)
T PRK09848 311 FFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGL--TYSLFSFTRKCGQAIGGSIPAFILGL 388 (448)
T ss_pred HHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhH--HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000 0 000 122578999999999 99999999999999999999999999
Q ss_pred CCCccCCCCcccccccccCCCccchHHHHHHHHHHhhHhHHHHHHHHHHHHhccCCCcCchhhhhhhcC
Q 014600 354 SPTVLDNNSSITSLTVLDNNSLISTSYISVTRFGLGLIPAICSLVSVAVTFTMKLHTPYSKPLVEPLLQ 422 (422)
Q Consensus 354 ~Gy~~~~~~~~~~~~~~~~~~~q~~~~~~~i~~~~~~~P~i~~l~~~~~~~~y~l~~~~~~~i~~~l~~ 422 (422)
.||+++ ..|+++++++++..++++|+++.+++++++++||+|||+|+|+++||.+
T Consensus 389 ~G~~~~--------------~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~y~l~~~~~~~~~~~l~~ 443 (448)
T PRK09848 389 SGYIAN--------------QVQTPEVIMGIRTSIALVPCGFMLLAFVIIWFYPLTDKKFKEIVVEIDN 443 (448)
T ss_pred cCCCCC--------------CcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHeeCCHHHHHHHHHHHHH
Confidence 999974 3599999999999999999999999999999999999999999999863
No 7
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=100.00 E-value=7.4e-45 Score=366.97 Aligned_cols=371 Identities=19% Similarity=0.255 Sum_probs=287.8
Q ss_pred eeeeeccchhHHHHHHHHHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcc----cCCchhHHHHHHHHH
Q 014600 26 VLYYGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDR----FGHFKIWHGAGSVLV 100 (422)
Q Consensus 26 ~~~y~~g~~~~~~~~~~~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr----~Grrrp~ll~g~i~~ 100 (422)
|++||+|+++.+..+.+..+|+++|++|. |++++++|+++++.+++|+++||++|+++|| +||||||++.+.++.
T Consensus 1 ~~~yg~g~~~~~~~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~ 80 (437)
T TIGR00792 1 KLSYGFGDFGNNFIFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPF 80 (437)
T ss_pred CeeeecchHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHH
Confidence 58999999999999999999999999998 9999999999999999999999999999996 899999999999999
Q ss_pred HHHHHHhhcCccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHH
Q 014600 101 AVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLY 180 (422)
Q Consensus 101 ~i~~~~lf~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~ 180 (422)
+++..++|+ .| +.+......++.+..+++++++++.++|+.++.+|+++|++||+++.++|+.+..+|+++++
T Consensus 81 ~i~~~~~~~--~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~ 153 (437)
T TIGR00792 81 SIVLVLLFT--TP-----DFSATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVA 153 (437)
T ss_pred HHHHHHHHh--CC-----CCCcchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 998888774 24 11111122333444457899999999999999999999999999999999999999998888
Q ss_pred HHHHHHHhhccCCCCCchHHHHHHHHHHHHHHHHHHHhhhhccccCccccccc--CCCcchhhhHHHHHHhHHHHHHHHH
Q 014600 181 AIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGL--RGNSHARISWAYWFKKILYYQVALV 258 (422)
Q Consensus 181 ~~~~~l~~~~~~~g~~~~~~~~~~~~~i~~~i~~i~~~i~~~~~~E~~~~~~~--~~~~~~~~~~~~~~~n~~f~~~~~~ 258 (422)
.+..|+...++. +++..+|++.+.+.+++++++.+++++.+||+++++++ +++.+.++.+++++|||+++..++.
T Consensus 154 ~~~~~l~~~~~~---~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 230 (437)
T TIGR00792 154 VIVLPLVSYFGG---GDDKFGWFMFALVLALIGVVSLIICFFGTKERYSEIPKNIEKKLSLKQIFKALFKNDQLLILCLA 230 (437)
T ss_pred HHHHHHHHHhCC---CcccccHHHHHHHHHHHHHHHHHHHHcCCEecCCCCCcccccCCCHHHHHHHHhCCHHHHHHHHH
Confidence 887787765431 12356899999999999988888888899997633111 2334567788999999999887777
Q ss_pred HHHHHHHHHhhhHHHHHHhhhccCccchh--Hh---------HHHHHH-----------HH-------HHHHHHHHH--H
Q 014600 259 YMLTRLVVNVSQAYLAFYVINDLRMGQSA--KA---------LVPAII-----------YI-------CSFIVSILL--Q 307 (422)
Q Consensus 259 ~~~~~~~~~~~~~y~~~y~~~~~~l~~~~--~~---------~iP~~~-----------~~-------~~~~~~~~~--~ 307 (422)
+++.+.+.+....+.++|..+..+..... .. ..|.+. +. .+.+...+. +
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (437)
T TIGR00792 231 YLFYNLAFNIKNGVQVYYFTYVLGDPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSN 310 (437)
T ss_pred HHHHHHHHHHHcchhheeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchh
Confidence 77766666555545555554444321111 00 011100 01 111100000 0
Q ss_pred ---------HH----------H-------hhhhhhhhcCccccccceehhhHHHHHHHHHHHHHHHHHhHhhCCCccCCC
Q 014600 308 ---------VT----------G-------ISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSYQSMSPTVLDNN 361 (422)
Q Consensus 308 ---------v~----------~-------~~~~~~~~g~r~~g~~~~~s~~~~~~K~~~a~~~~i~g~~l~~~Gy~~~~~ 361 (422)
+. . .+.+|+++|+|++|. ++|..++.+|+|++++..+.|++++..||+++
T Consensus 311 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~--~~~~~~~~~~~g~~lg~~i~g~ll~~~G~~~~-- 386 (437)
T TIGR00792 311 LPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGL--VYSVRTFVRKLGQALAGFLVGLILGIIGYVAN-- 386 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHH--HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcC--
Confidence 00 0 122466789999999 99999999999999999999999999999864
Q ss_pred CcccccccccCCCccchHHHHHHHHHHhhHhHHHHHHHHHHHH-hccCCCcCchhhhhhhcC
Q 014600 362 SSITSLTVLDNNSLISTSYISVTRFGLGLIPAICSLVSVAVTF-TMKLHTPYSKPLVEPLLQ 422 (422)
Q Consensus 362 ~~~~~~~~~~~~~~q~~~~~~~i~~~~~~~P~i~~l~~~~~~~-~y~l~~~~~~~i~~~l~~ 422 (422)
..|+++++++++..+.++|+++.++++++++ +||+|||+|+|+++||.+
T Consensus 387 ------------~~~~~~~~~~~~~~~~~~p~i~~~~~~~~~~~~y~l~~~~~~~i~~~l~~ 436 (437)
T TIGR00792 387 ------------AAQSPITLNGIKILMFAVPALFLLLAAIIIGRFYKLTEKKHAEIVEELEQ 436 (437)
T ss_pred ------------CcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHeeCcHHHHHHHHHHHhc
Confidence 3589999999999999999999999999997 999999999999999864
No 8
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.93 E-value=3.7e-26 Score=204.42 Aligned_cols=282 Identities=44% Similarity=0.752 Sum_probs=213.2
Q ss_pred CCCCCCCceeeeeeeccchhHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhc---------cc
Q 014600 16 SFTQPVGRWSVLYYGSGHMLNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELID---------RF 86 (422)
Q Consensus 16 ~~~~~l~~~~~~~y~~g~~~~~~~~~~~~~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsD---------r~ 86 (422)
-..|+++++.++.||.|++.|++...++.+|++.|+|++|+++....+++.++.+.|++..|+.|..+| |+
T Consensus 9 PstkPigr~svf~yGvGHmlNDitAScWFTYlllfltqiglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~ 88 (412)
T KOG4830|consen 9 PSTKPIGRTSVFAYGVGHMLNDITASCWFTYLLLFLTQIGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRI 88 (412)
T ss_pred CCCCcccceeeeeechhHHHhhHHHHHHHHHHHHHHHHhcCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhh
Confidence 357889999999999999999999999999999999999999999999999999999999999998777 89
Q ss_pred CCchhHHHHHHHHHHHHHHHhhcCccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHH
Q 014600 87 GHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTS 166 (422)
Q Consensus 87 Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~ 166 (422)
|||+.|..+|.++..+++...|.. .+ ++...++.. |
T Consensus 89 G~~~~wh~~gt~lVslSf~~ifg~---------a~-------------iF~~~~~~s----------------~------ 124 (412)
T KOG4830|consen 89 GRRMSWHLIGTVLVSLSFPMIFGF---------AK-------------IFLCKSTTS----------------E------ 124 (412)
T ss_pred cceeeeeecccEEEEEechhhcCc---------ee-------------EEeeccHHH----------------H------
Confidence 999999999998888876554420 00 000000000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCCCchHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccCCCcchhhhHHHH
Q 014600 167 CRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYW 246 (422)
Q Consensus 167 ~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~~~~~~~~~~~~i~~~i~~i~~~i~~~~~~E~~~~~~~~~~~~~~~~~~~~ 246 (422)
..++|-.... ...++........+....+||.++....+++....+.+.++||+...-+.++.+..+..|...
T Consensus 125 ----vanlglyaia---lvVFgv~~A~~ke~tea~~R~~~~~~v~lG~~~~~vF~~~TrEP~~~~~~~~s~~~Rm~W~~W 197 (412)
T KOG4830|consen 125 ----VANLGLYAIA---LVVFGVGWASVKESTEALIRLAGWLVVVLGITVAFVFYAFTREPTNSFSSDASELVRMHWTSW 197 (412)
T ss_pred ----HHHhHHHHHH---hheeeeeeecccccHHHHHHHhhhheeeeceeEEEEEeecccCcccccCcchhhhhcccchhh
Confidence 0111111000 001110000001234556788877766677776777788899987543334444567778889
Q ss_pred HHhHHHHHHHHHHHHHHHHHHhhhHHHHHHhhhccCccchhHhHHHHHHHHHHHHHHHHHH-------------------
Q 014600 247 FKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQ------------------- 307 (422)
Q Consensus 247 ~~n~~f~~~~~~~~~~~~~~~~~~~y~~~y~~~~~~l~~~~~~~iP~~~~~~~~~~~~~~~------------------- 307 (422)
|++-.|+.+.+.|++.....+..+.|+++|+.++.++..+..+.+|.+.++.++..+.+.+
T Consensus 198 F~~v~~YQiAllYmLsRL~iNiSQaYlaFfviddlqm~qsakAllP~v~Yl~SF~VS~v~~eipwngkrlKayYsaGgii 277 (412)
T KOG4830|consen 198 FGHVQFYQIALLYMLSRLYINISQAYLAFFVIDDLQMEQSAKALLPMVAYLSSFSVSMVNSEIPWNGKRLKAYYSAGGII 277 (412)
T ss_pred hhhhHHHHHHHHHHHHHHHhhhhhhheeeEEeehhhHHHHHhhhhHHHHHHhhhhHHhhcccCCcCcceeeeeeecccHH
Confidence 9999999999999999999999999999999999999999889999988777666665543
Q ss_pred ----------------------------------HHHhhhhhhhhcCccccccceehhhHHHHHHHHHHHHHHHH
Q 014600 308 ----------------------------------VTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQ 348 (422)
Q Consensus 308 ----------------------------------v~~~~~~~~~~g~r~~g~~~~~s~~~~~~K~~~a~~~~i~g 348 (422)
++..+++++..+++.|+.+|++|..+|.+|++.+++-.++-
T Consensus 278 wifcga~ilLlpr~i~symyAisvfIGIAnAimlvtslsitavli~~~~~~~aFv~GamSF~DKlS~GiA~~lie 352 (412)
T KOG4830|consen 278 WIFCGAVILLLPRGIKSYMYAISVFIGIANAIMLVTSLSITAVLINKNTESGAFVYGAMSFFDKLSNGIAYQLIE 352 (412)
T ss_pred HHHhhhheeecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCceEEEehHHHHHhhcccHHHHHHH
Confidence 12356789999999999999999999999999999877763
No 9
>PRK10504 putative transporter; Provisional
Probab=99.92 E-value=6.6e-23 Score=209.22 Aligned_cols=352 Identities=14% Similarity=0.071 Sum_probs=232.0
Q ss_pred eeeeccchhHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHH
Q 014600 27 LYYGSGHMLNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSS 106 (422)
Q Consensus 27 ~~y~~g~~~~~~~~~~~~~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~ 106 (422)
+.-..+.+..........+.+|.+..+.|.++.+.|++.+...+..++..|+.|+++||+||||.++ .+....+++..+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~-~~~~~~~~~~~~ 91 (471)
T PRK10504 13 WIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFF-TAIVLFTLGSLF 91 (471)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHH-HHHHHHHHHHHH
Confidence 4445556666666777778888888888999999999999999999999999999999999999854 566666655543
Q ss_pred hhcCccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 014600 107 VFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIV 186 (422)
Q Consensus 107 lf~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l 186 (422)
... .+ +.+ .+.+...+.+++.+.......++..+..+ +++|++..+.......+|..+++.+++.+
T Consensus 92 ~~~-------~~--~~~----~l~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~g~~~~g~l 157 (471)
T PRK10504 92 CAL-------SG--TLN----ELLLARVLQGVGGAMMVPVGRLTVMKIVP-REQYMAAMTFVTLPGQVGPLLGPALGGLL 157 (471)
T ss_pred HHH-------hC--CHH----HHHHHHHHHHhhhHHHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 221 11 111 12233456788888777777888888875 67889988888777788888777666555
Q ss_pred HhhccCCCCCchHHHHHHHHHHHHHHHHHHHhhhhccccCccccccc---------------------CCC---------
Q 014600 187 FSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGL---------------------RGN--------- 236 (422)
Q Consensus 187 ~~~~~~~g~~~~~~~~~~~~~i~~~i~~i~~~i~~~~~~E~~~~~~~---------------------~~~--------- 236 (422)
.+ ..+|++.+.+..++..+..++.....+|.+.++.+ +++
T Consensus 158 ~~----------~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (471)
T PRK10504 158 VE----------YASWHWIFLINIPVGIIGAIATLMLMPNYTMQTRRFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAI 227 (471)
T ss_pred Hh----------hccHHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHH
Confidence 43 23789888877666666555555444442211100 000
Q ss_pred ---------------------cchhhhHHHHHHhHHHHHHHHHHHHHHHHHHhhhHHHHHHhhhccCccchhHh--HHH-
Q 014600 237 ---------------------SHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKA--LVP- 292 (422)
Q Consensus 237 ---------------------~~~~~~~~~~~~n~~f~~~~~~~~~~~~~~~~~~~y~~~y~~~~~~l~~~~~~--~iP- 292 (422)
.+...++ +++|||+++..+...++.+........+.|.|.++..+.++.... ..|
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~ 306 (471)
T PRK10504 228 AGLVAVGVVALLLYLLHARNNNRALFSL-KLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPM 306 (471)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCccCH-HHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 0001122 478999998877777776666666666777777766666553321 111
Q ss_pred ---------HHH-----------HHHHHHHH--------HHH--H----------HHH----------hhhhhhhhcCcc
Q 014600 293 ---------AII-----------YICSFIVS--------ILL--Q----------VTG----------ISMQNVLVGEDL 322 (422)
Q Consensus 293 ---------~~~-----------~~~~~~~~--------~~~--~----------v~~----------~~~~~~~~g~r~ 322 (422)
... ...+.... +.. . +.+ ..+......+|.
T Consensus 307 ~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 386 (471)
T PRK10504 307 VLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNL 386 (471)
T ss_pred HHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHh
Confidence 100 01111000 000 0 001 011223456778
Q ss_pred ccccceehhhHHHHHHHHHHHHHHHHHhHhhCCCccCCCCcccccccccCCCccchHHHHHHHHHHhhHh-HHHHHHHHH
Q 014600 323 SGCAFVCGTLSFLDKMSCGIAVYVLQSYQSMSPTVLDNNSSITSLTVLDNNSLISTSYISVTRFGLGLIP-AICSLVSVA 401 (422)
Q Consensus 323 ~g~~~~~s~~~~~~K~~~a~~~~i~g~~l~~~Gy~~~~~~~~~~~~~~~~~~~q~~~~~~~i~~~~~~~P-~i~~l~~~~ 401 (422)
+|. .+|..++.+|+|+++|..+.|.+++..||+.. ++|++ ...+.+.+.++| +++.+++++
T Consensus 387 ~g~--~~~~~~~~~~~g~~ig~~i~g~ll~~~g~~~~--------------~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 448 (471)
T PRK10504 387 ASS--GNSLLSMIMQLSMSIGVTIAGLLLGLFGQQHV--------------SVDSG--ATHTVFMYTYLCMALIIALPAL 448 (471)
T ss_pred ccc--hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc--------------ccccc--cchhHHHHHHHHHHHHHHHHHH
Confidence 998 99999999999999999999999999999642 22333 444445556667 778888888
Q ss_pred HHHhccCCCcCchhhhhhhcC
Q 014600 402 VTFTMKLHTPYSKPLVEPLLQ 422 (422)
Q Consensus 402 ~~~~y~l~~~~~~~i~~~l~~ 422 (422)
++.+||++|++|+++++|+.+
T Consensus 449 ~~~~~~~~~~~~~~~~~~~~~ 469 (471)
T PRK10504 449 IFARVPNDTHQNVAISRRKRS 469 (471)
T ss_pred HHhcCCcchhhhhcccccccc
Confidence 888999999999999888753
No 10
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.89 E-value=3.2e-20 Score=188.31 Aligned_cols=350 Identities=12% Similarity=0.088 Sum_probs=247.7
Q ss_pred CceeeeeeeccchhHHHHH-HHHHHHHHHHHHHh----CCC--------------------------hhHHHHHHHHHHH
Q 014600 22 GRWSVLYYGSGHMLNDITA-ACWFTYLLLFLTDI----GLS--------------------------PRGAAAVMLSGQI 70 (422)
Q Consensus 22 ~~~~~~~y~~g~~~~~~~~-~~~~~~l~~f~t~~----gls--------------------------~~~~g~i~~i~~l 70 (422)
++|+..+|.+.|++++... .+...|+|.|++++ |.. .+..+...+++.+
T Consensus 2 tr~~i~~W~lyd~ans~f~~~i~t~~~p~~~~~~a~~~g~~~~~~~~~c~~~~~~c~~~~~g~~~~~~s~~~~~~sis~l 81 (477)
T PF11700_consen 2 TRREIWSWALYDWANSPFATVIVTFFFPPYFQSLAREAGVLPGDPTQPCSDSDDDCVVPFFGSWIDTSSLWLYANSISGL 81 (477)
T ss_pred chhHHHHHHHhHhhcccchhhhHHHHHHHHHHHHHHhcccccccccCcccccCCccccccccccccHhHHHHHHHHHHHH
Confidence 4577899999999988643 45567889999885 211 2456788999999
Q ss_pred HhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhh
Q 014600 71 ADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSM 150 (422)
Q Consensus 71 ~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al 150 (422)
+.++..|+.|.++|+.|+||+++.+.+....++..+++. ++ .+.++... ++.++-.++|...++.|+++
T Consensus 82 ~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~--v~------~~~~~~~~---~l~iia~v~~~~~~vfyna~ 150 (477)
T PF11700_consen 82 LQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWF--VS------PGQWWLAL---VLFIIANVGYEASNVFYNAY 150 (477)
T ss_pred HHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHH--hC------cchHHHHH---HHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999998888888877766653 11 12222211 11235678899999999999
Q ss_pred hhhccCCccc-------------------------hhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchHHHHHHH
Q 014600 151 VNCITLNSTS-------------------------RVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWI 205 (422)
Q Consensus 151 ~~~~t~~~~e-------------------------R~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~~~~~~~~~~ 205 (422)
+|++++++++ |+++++.....+++|+++...+...++...+.. .+.....|..
T Consensus 151 LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~--~~~~~~~r~~ 228 (477)
T PF11700_consen 151 LPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGST--ASNTWAIRVA 228 (477)
T ss_pred hHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCc--cccchhhhHH
Confidence 9999986555 399999999999999988877765554433211 1223567888
Q ss_pred HHHHHHHHHHHHhhhhccccCcccccc-cCCC-------cchhhhHHHHHHhHHHHHHHHHHHHHHHHHHhhhHHHHHHh
Q 014600 206 AYSSIFIGCCFVGIFLSRTEEPRLKMG-LRGN-------SHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYV 277 (422)
Q Consensus 206 ~~i~~~i~~i~~~i~~~~~~E~~~~~~-~~~~-------~~~~~~~~~~~~n~~f~~~~~~~~~~~~~~~~~~~y~~~y~ 277 (422)
+.+.++..++..+..++++||++.+++ ++.+ ++..+.+|++.|+|+..++++.+++..-+.+++......|.
T Consensus 229 ~~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~t~k~~~~~~~~~~fLia~~l~~dg~~ti~~~~~i~a 308 (477)
T PF11700_consen 229 FLIVALWWLVFSIPLFLWLPDRPGPRPLPSGSSYLRFGFKRLWRTFKEIRKLRQLFLFLIAYFLYSDGVNTIISFAGIYA 308 (477)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888888989899999999875222 1111 12345567777788888888999998889999999999999
Q ss_pred hhccCccchhHhHHHHHH--------------------------------HHHHHHHHHHH--------H----------
Q 014600 278 INDLRMGQSAKALVPAII--------------------------------YICSFIVSILL--------Q---------- 307 (422)
Q Consensus 278 ~~~~~l~~~~~~~iP~~~--------------------------------~~~~~~~~~~~--------~---------- 307 (422)
.+..+++......+-++. +..-.+..+++ +
T Consensus 309 ~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~ 388 (477)
T PF11700_consen 309 TEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAV 388 (477)
T ss_pred HHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHH
Confidence 999999876532111100 00000011110 0
Q ss_pred HH----------HhhhhhhhhcCccccccceehhhHHHHHHHHHHHHHHHHHhHhhCCCccCCCCcccccccccCCCccc
Q 014600 308 VT----------GISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSYQSMSPTVLDNNSSITSLTVLDNNSLIS 377 (422)
Q Consensus 308 v~----------~~~~~~~~~g~r~~g~~~~~s~~~~~~K~~~a~~~~i~g~~l~~~Gy~~~~~~~~~~~~~~~~~~~q~ 377 (422)
+. ..++.....-+.+|+. +||.+.+..|.+.-+|+.+.|.+.+.+|-.
T Consensus 389 ~~G~~~G~~qs~sRs~~~~LiP~g~e~e--fFgly~i~gk~ss~lGPll~g~i~~~tg~~-------------------- 446 (477)
T PF11700_consen 389 LIGLFMGGIQSASRSLFSRLIPPGREAE--FFGLYAITGKASSWLGPLLFGLITDATGSQ-------------------- 446 (477)
T ss_pred HHHHHhhhHHHHHHHHHHHhCCCchhhH--HHHHHHHHHHHHHHHHHHHHHHHHHHhCCc--------------------
Confidence 01 1334455666778898 999999999999999999999999888621
Q ss_pred hHHHHHHHHHHhhHhHHHHHHHHHHHHhccCCCcCch
Q 014600 378 TSYISVTRFGLGLIPAICSLVSVAVTFTMKLHTPYSK 414 (422)
Q Consensus 378 ~~~~~~i~~~~~~~P~i~~l~~~~~~~~y~l~~~~~~ 414 (422)
|..+.. -+++++++++++.+-+.+|.++|
T Consensus 447 -------r~g~~~-l~~lf~~gl~ll~~v~~~~g~~~ 475 (477)
T PF11700_consen 447 -------RYGFLF-LLVLFLIGLILLFFVDVEKGRED 475 (477)
T ss_pred -------hhHHHH-HHHHHHHHHHHHhhccchhhhhc
Confidence 222322 25677788888877777776655
No 11
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.85 E-value=4.3e-18 Score=170.36 Aligned_cols=231 Identities=13% Similarity=0.039 Sum_probs=160.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhccc-----CCchhHHHHHHHHHHHHHHHhh
Q 014600 34 MLNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRF-----GHFKIWHGAGSVLVAVSFSSVF 108 (422)
Q Consensus 34 ~~~~~~~~~~~~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~-----Grrrp~ll~g~i~~~i~~~~lf 108 (422)
+.+.+.......-+|.|+++.|+|..++|++..+...+ +..|++|+++||+ ||||+|++.+.++.+++...+.
T Consensus 9 ~~~~~~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~~--~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~ 86 (402)
T PRK11902 9 FASGLPLALTSGTLQAWMTVEGLDIQTIGFFSLVGQAY--IFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMA 86 (402)
T ss_pred HHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH--HHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHH
Confidence 34566667777789999999999999999998888875 8899999999998 9999999998888887776655
Q ss_pred cCccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 014600 109 GGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFS 188 (422)
Q Consensus 109 ~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~ 188 (422)
. .+ +. ...+. ..+..++.+...+..+++..++.+|+.+ ++||++.++++..+..+|.++++.+...+.+
T Consensus 87 ~--~~----~~-~~~~~---l~~~~~~~~~~~~~~~~~~~al~~~~~~-~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~ 155 (402)
T PRK11902 87 F--CP----PH-AALWP---LAGLAVLVAFLSASQDIVFDAYSTDVLH-PEERGAGAAVKVLGYRLAMLVSGGLALWLAD 155 (402)
T ss_pred h--cC----cc-chHHH---HHHHHHHHHHHHHHHHHHHHHHHHHhcC-hhhhhHHHHHHHHHHHHHHHHHhHHHHHHHh
Confidence 3 11 11 12221 1112234567788899999999999975 6789999999999888888888766655443
Q ss_pred hccCCCCCchHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccCC--CcchhhhHHHHHHhHHHHHHHHHHHHHHHHH
Q 014600 189 VSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRG--NSHARISWAYWFKKILYYQVALVYMLTRLVV 266 (422)
Q Consensus 189 ~~~~~g~~~~~~~~~~~~~i~~~i~~i~~~i~~~~~~E~~~~~~~~~--~~~~~~~~~~~~~n~~f~~~~~~~~~~~~~~ 266 (422)
. ..+|+..+.+.+++.++..+. .+..||++.++++++ +++.++.+++++|||.++..++..++.....
T Consensus 156 ~---------~~gw~~~f~i~a~~~l~~~l~-~~~~~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~l~~~~~ 225 (402)
T PRK11902 156 R---------VLGWGNTYLLMAGLMLAGALT-TLWAPEPEVPARPPRSLGEAVVGPLRDFFSRRGAWALLLLIVLYKLGD 225 (402)
T ss_pred c---------ccCHHHHHHHHHHHHHHHHHH-HHhcCCCcccccccchhHHHHHHHHHHHHhCcCHHHHHHHHHHHHhHH
Confidence 1 127888888877766655443 455677543321111 1234567888999999877665555544433
Q ss_pred HhhhHHHHHHhhhccCccchh
Q 014600 267 NVSQAYLAFYVINDLRMGQSA 287 (422)
Q Consensus 267 ~~~~~y~~~y~~~~~~l~~~~ 287 (422)
.....+.+.|+.++.++++..
T Consensus 226 ~~~~~~~~~~l~~~~G~~~~~ 246 (402)
T PRK11902 226 AFAGSLSTTFLIRGAGFSAGE 246 (402)
T ss_pred HHHHHHHHHHHHHhcCCCHHH
Confidence 333344555666666766543
No 12
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.85 E-value=1.4e-19 Score=182.79 Aligned_cols=256 Identities=16% Similarity=0.088 Sum_probs=183.3
Q ss_pred CceeeeeeeccchhHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhc----ccCCchhHHHHHH
Q 014600 22 GRWSVLYYGSGHMLNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELID----RFGHFKIWHGAGS 97 (422)
Q Consensus 22 ~~~~~~~y~~g~~~~~~~~~~~~~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsD----r~Grrrp~ll~g~ 97 (422)
+.++.+.-+...+|.++.+.+..+++++|+.+.|+++..++.++.++.+.+.+.+|++|+++| |+|||||+++.+.
T Consensus 2 ~~~~li~~~~~~~Giq~~~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~ 81 (477)
T TIGR01301 2 PLRKLLRVASVAAGVQFGWALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGA 81 (477)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHH
Confidence 455667777778899999999999999988777999999999999999999999999999999 5999999998888
Q ss_pred HHHHHHHHHhhcCccCc-c--cc---CCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccch-hhHHHHHHH
Q 014600 98 VLVAVSFSSVFGGCMPC-R--IL---STSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSR-VVLTSCRNA 170 (422)
Q Consensus 98 i~~~i~~~~lf~~~~p~-~--~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR-~~l~~~~~~ 170 (422)
+..++++.++.+ .+. . +. +.....+..+.+++...+.+++.+..+.|+.++++|++++++|| ....++.+.
T Consensus 82 ~~~~~~l~ll~~--~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~ 159 (477)
T TIGR01301 82 ALVAFAVILIGF--AADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSF 159 (477)
T ss_pred HHHHHHHHHHHh--CchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHH
Confidence 888887766543 110 0 00 00111222223333334567888999999999999999876665 478899999
Q ss_pred HHHHHHHHHHHHHHHH--HhhccCCCC---CchHHHHHHHHHHHHHHHHHHHhhhhccccCccccccc---------CCC
Q 014600 171 FTMVANLSLYAIAFIV--FSVSTAKTH---ADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGL---------RGN 236 (422)
Q Consensus 171 ~~~ig~~l~~~~~~~l--~~~~~~~g~---~~~~~~~~~~~~i~~~i~~i~~~i~~~~~~E~~~~~~~---------~~~ 236 (422)
+.++|+++++.+++.. ...++..+. +....++++.+++.+++.+++.++.++.+||++..+++ .++
T Consensus 160 ~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~~~~~~~~~ 239 (477)
T TIGR01301 160 FMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFINSEAAPPSK 239 (477)
T ss_pred HHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccchhhhcccccc
Confidence 9999999998877543 111110000 01113788889998888999999999999997531110 111
Q ss_pred cchhhhHHHHHHh-----HHHHHHHHHHHHHHHHHHhhhHHHHHHhhh
Q 014600 237 SHARISWAYWFKK-----ILYYQVALVYMLTRLVVNVSQAYLAFYVIN 279 (422)
Q Consensus 237 ~~~~~~~~~~~~n-----~~f~~~~~~~~~~~~~~~~~~~y~~~y~~~ 279 (422)
.+....+++++++ |+.++++.+++++|++...+..|...|+-+
T Consensus 240 ~~~~~~~~~i~~~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~ 287 (477)
T TIGR01301 240 HGEEAFFGELFGAFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGR 287 (477)
T ss_pred cchhhhHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 1112223343333 346788999999999999999999999764
No 13
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.84 E-value=4e-18 Score=166.75 Aligned_cols=303 Identities=16% Similarity=0.113 Sum_probs=193.7
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcC
Q 014600 31 SGHMLNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGG 110 (422)
Q Consensus 31 ~g~~~~~~~~~~~~~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~ 110 (422)
.+.+...+...+....++.|..|.+.++.++|++.++..+..++..|+.|+++||+||||.++ .+.+..+++..++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~-~~~~~~~~~~~~~~~- 83 (365)
T TIGR00900 6 AAQLISLIGTAITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMI-GADLIRAVLVAVLPF- 83 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHH-HHHHHHHHHHHHHHH-
Confidence 345556666667777788888888999999999999999999999999999999999999854 555555444433221
Q ss_pred ccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 014600 111 CMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVS 190 (422)
Q Consensus 111 ~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~ 190 (422)
.+ ..++.+.+ .+.+...+.+++.+....+..++.+|+.+ ++||++..++.+....+|.++++.+++.+.+
T Consensus 84 -~~--~~~~~~~~----~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~-- 153 (365)
T TIGR00900 84 -VA--LLGGLNIW----QVYVLAGILAIAQAFFTPAYQAMLPDLVP-EEQLTQANSLSQAVRSLFYIVGPGIGGLMYA-- 153 (365)
T ss_pred -HH--HcCCCcHH----HHHHHHHHHHHHHHHHHHHHHHHHHhcCC-HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH--
Confidence 01 01111222 12223346788888888999999999986 5799999999999999999888877766543
Q ss_pred cCCCCCchHHHHHHHHHHHHHHHHHHHhhhhc-cccCcccccccCCC----cchhhhHHHHHHhHHHHHHHHHHHHHHHH
Q 014600 191 TAKTHADLENQYRWIAYSSIFIGCCFVGIFLS-RTEEPRLKMGLRGN----SHARISWAYWFKKILYYQVALVYMLTRLV 265 (422)
Q Consensus 191 ~~~g~~~~~~~~~~~~~i~~~i~~i~~~i~~~-~~~E~~~~~~~~~~----~~~~~~~~~~~~n~~f~~~~~~~~~~~~~ 265 (422)
..+|++.+.+.++..++..++.+. ..||++.+++++.+ .+.++.++.++|||.++......++....
T Consensus 154 --------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (365)
T TIGR00900 154 --------TLGIKWAIWVDAVGFAISALLIVSVRIPELAASEIQALSNAVLRDTREGIKFVLKNPLLRTLLLLALLFNLV 225 (365)
T ss_pred --------HhhHHHHHHHHHHHHHHHHHHHHhcccccCCCccccccchhHHHHHHhHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 247888777665555444333322 22332211111111 12345567788999887766666555555
Q ss_pred HHhhh-HHHHHHhhhccCccchhHhHH------------HHH-----------HHHHHHH-------H-HHHH--H----
Q 014600 266 VNVSQ-AYLAFYVINDLRMGQSAKALV------------PAI-----------IYICSFI-------V-SILL--Q---- 307 (422)
Q Consensus 266 ~~~~~-~y~~~y~~~~~~l~~~~~~~i------------P~~-----------~~~~~~~-------~-~~~~--~---- 307 (422)
..... .+.|.|..+..+.+......+ +.. ....+.. . .... .
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (365)
T TIGR00900 226 FAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFPLFL 305 (365)
T ss_pred HHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhchhHHHHH
Confidence 54444 677888776566554332100 000 0000000 0 0000 0
Q ss_pred ----HHH----------hhhhhhhhcCccccccceehhhHHHHHHHHHHHHHHHHHhHhhCC
Q 014600 308 ----VTG----------ISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSYQSMSP 355 (422)
Q Consensus 308 ----v~~----------~~~~~~~~g~r~~g~~~~~s~~~~~~K~~~a~~~~i~g~~l~~~G 355 (422)
+.+ ..+..+...+++.|. .+|..+...++++.+++.+.|.+.+..|
T Consensus 306 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~--~~~~~~~~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 306 VLWFAIGVGYGPINVPQGTLLQRRVPAELLGR--VFGAQFSLSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 001 122345556777788 9999999999999999999999988765
No 14
>PRK03545 putative arabinose transporter; Provisional
Probab=99.84 E-value=7.1e-18 Score=167.99 Aligned_cols=212 Identities=8% Similarity=-0.079 Sum_probs=147.4
Q ss_pred HHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCccchh
Q 014600 45 TYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKV 124 (422)
Q Consensus 45 ~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~~~ 124 (422)
+.++.+.+|.|+++.++|++.+...+..++..++.|+++||+||||. +..+....+++...... .+ +.+
T Consensus 30 ~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~-~~~~~~~~~~~~~~~~~-------~~--~~~- 98 (390)
T PRK03545 30 GLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKL-LIGLFVLFIASHVLSAL-------AW--NFT- 98 (390)
T ss_pred cchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHH-HHHHHHHHHHHHHHHHH-------hc--cHH-
Confidence 44566556669999999999999999999999999999999999987 55677777766544331 11 122
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchHHHHHH
Q 014600 125 ETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRW 204 (422)
Q Consensus 125 ~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~~~~~~~~~ 204 (422)
.+.+.+.+.+++.+....+..++.+++++ ++||++..++...+..+|..+++.++..+.+ ..+|++
T Consensus 99 ---~l~~~r~~~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~----------~~gw~~ 164 (390)
T PRK03545 99 ---VLLISRIGIAFAHAIFWSITASLAIRVAP-AGKKAQALSLLATGTALAMVLGLPLGRVIGQ----------YLGWRT 164 (390)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHHHhCC-hhhhhhHHHHHHHHHHHHHHHHhhHHHHHHH----------HhcHHH
Confidence 12223345677777777777888999886 6789999999988888888877766544332 348999
Q ss_pred HHHHHHHHHHHHHhhhhccccCcccccccCCCcchhhhHHHHHHhHHHHHHHHHHHHHHHHHHhhhHHHHHHhhhccCcc
Q 014600 205 IAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMG 284 (422)
Q Consensus 205 ~~~i~~~i~~i~~~i~~~~~~E~~~~~~~~~~~~~~~~~~~~~~n~~f~~~~~~~~~~~~~~~~~~~y~~~y~~~~~~l~ 284 (422)
.+.+.++++++..+..+...||++.+ ++ +..++.++.+|||.++......++..........|.+.|+.+..+.+
T Consensus 165 ~f~~~~~~~~l~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s 239 (390)
T PRK03545 165 TFLAIGGGALITLLLLIKLLPLLPSE----HS-GSLKSLPLLFRRPALVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLS 239 (390)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCC----Cc-chHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 98888877777666555555654321 11 22345678899998876555544444444455678888887766665
Q ss_pred ch
Q 014600 285 QS 286 (422)
Q Consensus 285 ~~ 286 (422)
..
T Consensus 240 ~~ 241 (390)
T PRK03545 240 EN 241 (390)
T ss_pred cc
Confidence 54
No 15
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.83 E-value=1.8e-18 Score=175.89 Aligned_cols=288 Identities=14% Similarity=0.089 Sum_probs=176.8
Q ss_pred HHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCccchhhh
Q 014600 47 LLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVET 126 (422)
Q Consensus 47 l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~~~~~ 126 (422)
..+++.+.|+++.+.|++.++..+..++.+|+.|+++||+||||. ++.+.+..+++..++.. .+. ...+..
T Consensus 51 ~~p~l~~~g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~-l~~~~~~~~i~~~~~~~--~~~---~~~~~~--- 121 (452)
T PRK11273 51 AMPYLVEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVF-LPAGLILAAAVMLFMGF--VPW---ATSSIA--- 121 (452)
T ss_pred hhHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchh-HHHHHHHHHHHHHHHHh--hhc---ccccHH---
Confidence 334455459999999999999999999999999999999999987 55677777666544321 110 011111
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHH-HHHHHHHHHhhccCCCCCchHHHHHHH
Q 014600 127 ISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLS-LYAIAFIVFSVSTAKTHADLENQYRWI 205 (422)
Q Consensus 127 ~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l-~~~~~~~l~~~~~~~g~~~~~~~~~~~ 205 (422)
...+...+.+++.+....+..+...++.+ +++|++..++.+.+..+|+.+ ++.....+. ...+|++.
T Consensus 122 -~~~~~~~l~gi~~g~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~----------~~~gw~~~ 189 (452)
T PRK11273 122 -VMFVLLFLCGWFQGMGWPPCGRTMVHWWS-QKERGGIVSVWNCAHNVGGGLPPLLFLLGMA----------WFNDWHAA 189 (452)
T ss_pred -HHHHHHHHHHHHHhccchHHHHHHHHhCC-hHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH----------HhccHHHH
Confidence 11222235666666665666777788765 678999999887777777533 322211111 12378988
Q ss_pred HHHHHHHHHHHHhhhhccccCccccc-----cc---------C----CCcchhhhH-HHHHHhHHHHHHHHHHHHHHHHH
Q 014600 206 AYSSIFIGCCFVGIFLSRTEEPRLKM-----GL---------R----GNSHARISW-AYWFKKILYYQVALVYMLTRLVV 266 (422)
Q Consensus 206 ~~i~~~i~~i~~~i~~~~~~E~~~~~-----~~---------~----~~~~~~~~~-~~~~~n~~f~~~~~~~~~~~~~~ 266 (422)
+++.+++.++..++..+..||++.+. ++ + ++.+.++.+ +.++|||.++...+...+.....
T Consensus 190 f~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 269 (452)
T PRK11273 190 LYMPAFAAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKHEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLR 269 (452)
T ss_pred HHHHHHHHHHHHHHHHHHccCCHhhcCCCChhhhhhccccccccccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHH
Confidence 88887777776666667777754320 00 0 000112222 34678898887777666666666
Q ss_pred HhhhHHHHHHhhhccCccchhHh---------HHHH-------------------HHH-----HHHHHHHHHHH------
Q 014600 267 NVSQAYLAFYVINDLRMGQSAKA---------LVPA-------------------IIY-----ICSFIVSILLQ------ 307 (422)
Q Consensus 267 ~~~~~y~~~y~~~~~~l~~~~~~---------~iP~-------------------~~~-----~~~~~~~~~~~------ 307 (422)
.....|+|.|+++..+++..... .++. ... .++.....+..
T Consensus 270 ~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 349 (452)
T PRK11273 270 YGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAGNPTV 349 (452)
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcccChHH
Confidence 67788999999987666543211 0000 000 00000000000
Q ss_pred ------HHHh----------hhhhhhhcCccccccceehhhHHHHHHHHHH-HHHHHHHhHhhCCCc
Q 014600 308 ------VTGI----------SMQNVLVGEDLSGCAFVCGTLSFLDKMSCGI-AVYVLQSYQSMSPTV 357 (422)
Q Consensus 308 ------v~~~----------~~~~~~~g~r~~g~~~~~s~~~~~~K~~~a~-~~~i~g~~l~~~Gy~ 357 (422)
..+. .+..+...++..|. ..|..++...+|.++ ++.+.|.+.+..||.
T Consensus 350 ~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~--~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~ 414 (452)
T PRK11273 350 DMACMIVIGFLIYGPVMLIGLHALELAPKKAAGT--AAGFTGLFGYLGGSVAASAIVGYTVDFFGWD 414 (452)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhh--HHHHHHHHHHHHHHHhhhhhHHHHHHHhcch
Confidence 0010 01234556777888 899999888998776 688999999988864
No 16
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.82 E-value=2.3e-17 Score=169.34 Aligned_cols=306 Identities=13% Similarity=0.091 Sum_probs=200.1
Q ss_pred eeeeeccchhHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhccc-----CCchhHHHHHHHHH
Q 014600 26 VLYYGSGHMLNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRF-----GHFKIWHGAGSVLV 100 (422)
Q Consensus 26 ~~~y~~g~~~~~~~~~~~~~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~-----Grrrp~ll~g~i~~ 100 (422)
......-.+...+........++.++++.|.+..++|....++..+ +..|++|.++||+ ||||+|++.+.++.
T Consensus 14 ~~~~~~l~~~~gl~~~~~~~~l~~~l~~~g~~~~~ig~~~~~~~~~--~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~ 91 (491)
T PRK11010 14 SAILLILGFASGLPLALTSGTLQAWMTVENIDLKTIGFFSLVGQAY--VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLL 91 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH--HHHHHHHHHHHcccccCCCCchHHHHHHHHHH
Confidence 3444455566677777777888999998899999999986666554 5789999999998 99999999988888
Q ss_pred HHHHHHh-hcCccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHH
Q 014600 101 AVSFSSV-FGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSL 179 (422)
Q Consensus 101 ~i~~~~l-f~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~ 179 (422)
+++...+ +. .| ..+.++ .....++.+++.+..+++..++.+|+++ ++||++..+++..+..+|.+++
T Consensus 92 ~~~~~~~a~~--~~-----~~~l~~----l~~~~~l~~~~~a~~~i~~~a~~~~~~~-~~~rg~~~~i~~~g~~lG~llg 159 (491)
T PRK11010 92 LVAIAAMGFL--EP-----GTQLRW----LAALAVVIAFCSASQDIVFDAWKTDVLP-AEERGAGAAISVLGYRLAMLVS 159 (491)
T ss_pred HHHHHHHHHc--CC-----cchHHH----HHHHHHHHHHHHHHHHHHHHHHHHHhcC-hhhhHHHHHHHHHHHHHHHHHH
Confidence 7776554 32 12 122222 2222346777888999999999999986 6899999999999999998888
Q ss_pred HHHHHHHHhhccCCCCCchHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccCC--CcchhhhHHHHHHhHHHHHHHH
Q 014600 180 YAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRG--NSHARISWAYWFKKILYYQVAL 257 (422)
Q Consensus 180 ~~~~~~l~~~~~~~g~~~~~~~~~~~~~i~~~i~~i~~~i~~~~~~E~~~~~~~~~--~~~~~~~~~~~~~n~~f~~~~~ 257 (422)
+.+...+.+. ..||+..+++.++++++..+..+ ..||++.++++++ +.+..+.+++.++++..+....
T Consensus 160 ~~l~~~l~~~---------~~GWr~~f~i~a~l~ll~~l~~~-~~~e~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ll 229 (491)
T PRK11010 160 GGLALWLADR---------YLGWQGMYWLMAALLIPCIIATL-LAPEPTDTIPVPKTLEQAVVAPLRDFFGRNNAWLILL 229 (491)
T ss_pred HHHHHHHHhc---------ccCHHHHHHHHHHHHHHHHHHHH-hcCCCccccccccchhhhHHHHHHHHHcCcCHHHHHH
Confidence 7665554431 13899999888877776655444 4688643211111 1112346777887776665544
Q ss_pred HHHHHHHHHHhhhHHHHHHhhhccCccchhHhH----HHHHH---------------------HHHHHH--H---H-H--
Q 014600 258 VYMLTRLVVNVSQAYLAFYVINDLRMGQSAKAL----VPAII---------------------YICSFI--V---S-I-- 304 (422)
Q Consensus 258 ~~~~~~~~~~~~~~y~~~y~~~~~~l~~~~~~~----iP~~~---------------------~~~~~~--~---~-~-- 304 (422)
..++..........+.+.|+.+..|++....+. ...+. .+.+.. + . .
T Consensus 230 ~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l 309 (491)
T PRK11010 230 LIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLL 309 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 444544555555667777877767776554211 11100 000000 0 0 0
Q ss_pred -H-HH----------H----HH------hhhhhhhhcCccccccceehhhHHHHHHHHHHHHHHHHHhHhhCCCc
Q 014600 305 -L-LQ----------V----TG------ISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSYQSMSPTV 357 (422)
Q Consensus 305 -~-~~----------v----~~------~~~~~~~~g~r~~g~~~~~s~~~~~~K~~~a~~~~i~g~~l~~~Gy~ 357 (422)
. .+ + .+ ..+..+...++..|. .++..+....+|..+++.+.|++.+..||+
T Consensus 310 ~~~~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t--~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~ 382 (491)
T PRK11010 310 SITDKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSAT--QFALLSALSAVGRVYVGPVAGWFVEAHGWP 382 (491)
T ss_pred HhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHH--HHHHHHHHHHHHHHHHHHHHHHHHHHhChH
Confidence 0 00 0 01 112334556667777 888888888999888889999999988874
No 17
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.82 E-value=2.9e-17 Score=162.02 Aligned_cols=295 Identities=11% Similarity=-0.017 Sum_probs=180.7
Q ss_pred chhHHHHHHHHHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCc
Q 014600 33 HMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGC 111 (422)
Q Consensus 33 ~~~~~~~~~~~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~ 111 (422)
.+...+......++++.|+.+. |.|+.++|++.++..+.+.+.+|+.|+++||+||||++++.+.+..+++..+...
T Consensus 6 ~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~-- 83 (375)
T TIGR00899 6 AFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAW-- 83 (375)
T ss_pred HHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHh--
Confidence 3455666677788899998876 9999999999999999999999999999999999999776665555544433221
Q ss_pred cCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhH--HHHHHHHHHHHHHHHHHHHHHHHhh
Q 014600 112 MPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVL--TSCRNAFTMVANLSLYAIAFIVFSV 189 (422)
Q Consensus 112 ~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l--~~~~~~~~~ig~~l~~~~~~~l~~~ 189 (422)
++ +.+ . +++...+.+.+.+.......++..|..+ +++|.+. .+......++|..+++.+++.+.+
T Consensus 84 -----~~--~~~-~---l~~~~~~~g~~~~~~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~- 150 (375)
T TIGR00899 84 -----NR--NYF-L---LLVLGVLLSSFASTANPQLFALAREHAD-RTGREAVMFSSVMRAQISLAWVIGPPLAFWLAL- 150 (375)
T ss_pred -----cc--hHH-H---HHHHHHHHHhhhhhhHHHHHHHHHHHhh-hcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHH-
Confidence 11 121 1 1122234444445555556677777764 3445432 455556667777776655544432
Q ss_pred ccCCCCCchHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccCCCcchhhhHHHHHHhHHHHHHHHHHHHHHHHHHhh
Q 014600 190 STAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKKILYYQVALVYMLTRLVVNVS 269 (422)
Q Consensus 190 ~~~~g~~~~~~~~~~~~~i~~~i~~i~~~i~~~~~~E~~~~~~~~~~~~~~~~~~~~~~n~~f~~~~~~~~~~~~~~~~~ 269 (422)
..+|++.+.+.+++.++..++.++..||++.+++++ +.+++.++.+|+|+++......++........
T Consensus 151 ---------~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (375)
T TIGR00899 151 ---------GFGFTVMFLTAALAFVLCGVLVWLFLPSYPRGAPGA---LTRLEVRGLLASRDTRLLFVACTLMWGCNILY 218 (375)
T ss_pred ---------hcccHHHHHHHHHHHHHHHHHHHHhCCCcccCcccc---cCcchhhhhhcCcchHHHHHHHHHHHHHHHHH
Confidence 247898888888777777666666677754332211 11233456778888766554444444444455
Q ss_pred hHHHHHHhhhccCccchhHh---------HHHHHH--------------HHHHHHHH-------HHHH----------HH
Q 014600 270 QAYLAFYVINDLRMGQSAKA---------LVPAII--------------YICSFIVS-------ILLQ----------VT 309 (422)
Q Consensus 270 ~~y~~~y~~~~~~l~~~~~~---------~iP~~~--------------~~~~~~~~-------~~~~----------v~ 309 (422)
..++|.|+.+..+.+....+ .++... ...+.+.. ...+ +.
T Consensus 219 ~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (375)
T TIGR00899 219 IINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLN 298 (375)
T ss_pred HhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66788888777776654321 011000 00010000 0000 00
Q ss_pred H----------hhhhhhhhcCccccccceehhhHHHHHHHHHHHHHHHHHhHhhCCCc
Q 014600 310 G----------ISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSYQSMSPTV 357 (422)
Q Consensus 310 ~----------~~~~~~~~g~r~~g~~~~~s~~~~~~K~~~a~~~~i~g~~l~~~Gy~ 357 (422)
+ .....+...++ .+. ..+..+...++|..+++.+.|.+.+..||+
T Consensus 299 g~~~g~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~ 353 (375)
T TIGR00899 299 AIFIGILAGIGMLYFQDLMPGR-AGA--ATTLYTNTGRVGWIIAGSVGGILAERWSYH 353 (375)
T ss_pred HHHHHHHHHHHHHHHHHhCcch-hhH--HHHHHHHHHHHHHHHHHHHHHHHHHhccch
Confidence 1 11122333443 346 789999999999999999999999887764
No 18
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.82 E-value=2e-17 Score=165.51 Aligned_cols=304 Identities=11% Similarity=0.053 Sum_probs=199.3
Q ss_pred CCCCCceeeeeeeccchhHHHHHHHHHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHH
Q 014600 18 TQPVGRWSVLYYGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAG 96 (422)
Q Consensus 18 ~~~l~~~~~~~y~~g~~~~~~~~~~~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g 96 (422)
.+|+++ ++.+ ...+..........++++.|+++. |.|+.++|++.++..+.+.+.+|+.|+++||+||||. +..+
T Consensus 7 ~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~-l~~~ 82 (400)
T PRK11646 7 ARNLGK--YFLL-IDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPM-IVTG 82 (400)
T ss_pred cccccH--HHHH-HHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHH-HHHH
Confidence 555554 3333 445556666677788999999887 9999999999999999999999999999999999877 5677
Q ss_pred HHHHHHHHHHhhcCccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHH
Q 014600 97 SVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVAN 176 (422)
Q Consensus 97 ~i~~~i~~~~lf~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~ 176 (422)
....+++...+.. .+ +.+ . ..+..++.+++.+....+..+++.+..+ +|+|++..++......+|.
T Consensus 83 ~~~~~~~~~~~~~-------~~--~~~-~---l~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~a~~~~~~~~~~g~ 148 (400)
T PRK11646 83 MLMRAAGFATMAI-------AH--EPW-L---LWLSCILSGLGGTLFDPPRTALVIKLIR-PHQRGRFFSLLMMQDSAGA 148 (400)
T ss_pred HHHHHHHHHHHHH-------hc--cHH-H---HHHHHHHHHHHHHHHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHH
Confidence 7777777655432 11 122 1 1223346777777778888899999876 6889999999999999999
Q ss_pred HHHHHHHHHHHhhccCCCCCchHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccCCCcchhhhHHHHHHhHHHHHHH
Q 014600 177 LSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKKILYYQVA 256 (422)
Q Consensus 177 ~l~~~~~~~l~~~~~~~g~~~~~~~~~~~~~i~~~i~~i~~~i~~~~~~E~~~~~~~~~~~~~~~~~~~~~~n~~f~~~~ 256 (422)
.+++.+++.+.. .+|++.+++.+++.++..++..+..||++.+ +++.+.++.+++++|||+++...
T Consensus 149 ~ig~~l~g~l~~-----------~g~~~~f~~~~~~~~~~~i~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 214 (400)
T PRK11646 149 VIGALLGSWLLQ-----------YDFRLVCATGAVLFVLAAAFNAWLLPAYKLS---TVRTPVREGMTRVLRDKRFVTYV 214 (400)
T ss_pred HHHHHHHHHHHH-----------hhHHHHHHHHHHHHHHHHHHHHHhCCccccc---ccchhhHHHHHHHHcCchHHHHH
Confidence 888777655541 3788888777666665555544555553221 11223456678889999987654
Q ss_pred HHHHHHHHHHHhhhHHHHHHhhhccCccchhH--------h----HHHHH-----------HHHHHHHHH---H--H--H
Q 014600 257 LVYMLTRLVVNVSQAYLAFYVINDLRMGQSAK--------A----LVPAI-----------IYICSFIVS---I--L--L 306 (422)
Q Consensus 257 ~~~~~~~~~~~~~~~y~~~y~~~~~~l~~~~~--------~----~iP~~-----------~~~~~~~~~---~--~--~ 306 (422)
+..+...........++|.|..+..+.+.... . ..|.. ....+.+.. . + .
T Consensus 215 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~ 294 (400)
T PRK11646 215 LTLTGYYMLAVQVMLMLPIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMV 294 (400)
T ss_pred HHHHHHHHHHHHHHHhhhhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHh
Confidence 44333333333345678888877644322110 0 00000 001111000 0 0 0
Q ss_pred H----------HHH----------hhhhhhhhcCccccccceehhhHHHHHHHHHHHHHHHHHhHhhCC
Q 014600 307 Q----------VTG----------ISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSYQSMSP 355 (422)
Q Consensus 307 ~----------v~~----------~~~~~~~~g~r~~g~~~~~s~~~~~~K~~~a~~~~i~g~~l~~~G 355 (422)
+ +.+ ..+..+...++..|. .+|..++...+|+.+|+.+.|++.+..|
T Consensus 295 ~~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~--~~g~~~~~~~~g~~ig~~l~G~l~~~~~ 361 (400)
T PRK11646 295 SNLQQLFTLICLFYIGSIIAEPARETLSASLADARARGS--YMGFSRLGLALGGAIGYIGGGWLFDLGK 361 (400)
T ss_pred hhHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCcccchh--hhhHHHHHHHHHHHhcccchHHHHHHHh
Confidence 0 001 111334557788888 9999999999999999999999998754
No 19
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.82 E-value=7.8e-17 Score=160.50 Aligned_cols=222 Identities=12% Similarity=0.084 Sum_probs=152.7
Q ss_pred HHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccC
Q 014600 39 TAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILS 118 (422)
Q Consensus 39 ~~~~~~~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~ 118 (422)
........+|.+..+.|.+..+.|++.++..+...+..|+.|+++||+||||. ++.+.++.+++..++.. .+
T Consensus 18 ~~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~-l~~~~~~~~i~~~~~~~-------~~ 89 (392)
T PRK10473 18 GIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPV-AIPGAALFIIASLLCSL-------AE 89 (392)
T ss_pred HHHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHH-HHHHHHHHHHHHHHHHH-------hC
Confidence 33444456677666679999999999999999999999999999999999776 66777777777665442 11
Q ss_pred CccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCch
Q 014600 119 TSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADL 198 (422)
Q Consensus 119 ~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~~~ 198 (422)
+.+. ..+...+.+++.+....+..++.+|..+ ++||++..++.+....+|..+++.++..+.+
T Consensus 90 --~~~~----~~~~~~l~g~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~---------- 152 (392)
T PRK10473 90 --TSSL----FLAGRFLQGIGAGCCYVVAFAILRDTLD-DRRRAKVLSLLNGITCIIPVLAPVLGHLIML---------- 152 (392)
T ss_pred --cHHH----HHHHHHHHHhhhhHHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------
Confidence 1121 1222345677777777778888999875 6899999999988888887777666544332
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhccccCcccccccCCCcchhhhHHHHHHhHHHHHHHHHHHHHHHHHHhhhHHHHHHhh
Q 014600 199 ENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVI 278 (422)
Q Consensus 199 ~~~~~~~~~i~~~i~~i~~~i~~~~~~E~~~~~~~~~~~~~~~~~~~~~~n~~f~~~~~~~~~~~~~~~~~~~y~~~y~~ 278 (422)
..+|++.+.+.+++.++..+++++..||++.+++ +++.+..+..++.+|||+++.......+..........+.|.|..
T Consensus 153 ~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (392)
T PRK10473 153 KFPWQSLFYTMAAMGILVLLLSLFILKETRPARA-PAASSKPRENSESLLNRFFLSRLVITTLSVTVILTFVNTSPVLLM 231 (392)
T ss_pred CcChHHHHHHHHHHHHHHHHHHHHHcCCCCCccc-CCccchHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCHHHHH
Confidence 2378888888877777777777777788653322 222233444567889998776554444443444445556677777
Q ss_pred hccCccch
Q 014600 279 NDLRMGQS 286 (422)
Q Consensus 279 ~~~~l~~~ 286 (422)
++.+++..
T Consensus 232 ~~~g~~~~ 239 (392)
T PRK10473 232 EQMGFSRG 239 (392)
T ss_pred HHcCCCHH
Confidence 77776654
No 20
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.82 E-value=1.8e-17 Score=165.62 Aligned_cols=299 Identities=11% Similarity=0.049 Sum_probs=184.3
Q ss_pred eccchhHHHHHHHHHHHHHHHHHHhCCChhH-----HHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHH
Q 014600 30 GSGHMLNDITAACWFTYLLLFLTDIGLSPRG-----AAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSF 104 (422)
Q Consensus 30 ~~g~~~~~~~~~~~~~~l~~f~t~~gls~~~-----~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~ 104 (422)
-++.+..........++++.|+++.|++..+ +|.+.++..+.+++.+|+.|+++||+||||. ++.+.+..+++.
T Consensus 20 ~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~-~~~~~~~~~~~~ 98 (408)
T PRK09874 20 WLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIM-LLRSALGMGIVM 98 (408)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHH-HHHHHHHHHHHH
Confidence 3566777778788888999999888887543 5999999999999999999999999999887 456677666665
Q ss_pred HHhhcCccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHH
Q 014600 105 SSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAF 184 (422)
Q Consensus 105 ~~lf~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~ 184 (422)
.++.. . .+.+ . +.+...+.+++.+. ..+..++..+..+ ++||++..+.......+|..+++.+.+
T Consensus 99 ~~~~~-------~--~~~~-~---~~~~~~~~g~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~ 163 (408)
T PRK09874 99 VLMGL-------A--QNIW-Q---FLILRALLGLLGGF-VPNANALIATQVP-RNKSGWALGTLSTGGVSGALLGPLAGG 163 (408)
T ss_pred HHHHH-------H--hhHH-H---HHHHHHHHHHhhhh-HHhHHHHHHHhcC-HhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 54331 1 1122 1 12222345554433 3445667777764 678999999888888888877776655
Q ss_pred HHHhhccCCCCCchHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccCCCcchhhhHHHHHHhHHHHH-HHHHHHHHH
Q 014600 185 IVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKKILYYQ-VALVYMLTR 263 (422)
Q Consensus 185 ~l~~~~~~~g~~~~~~~~~~~~~i~~~i~~i~~~i~~~~~~E~~~~~~~~~~~~~~~~~~~~~~n~~f~~-~~~~~~~~~ 263 (422)
.+.+ ..+|++.+.+.+++.++..++.++..||++.+++++++.+.++ ..+.+|||+++. +....++..
T Consensus 164 ~l~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 232 (408)
T PRK09874 164 LLAD----------SYGLRPVFFITASVLFLCFLVTLFCIRENFQPVSKKEMLHMRE-VVTSLKNPKLVLSLFVTTLIIQ 232 (408)
T ss_pred HHHH----------HhCHHHHHHHHHHHHHHHHHHHHHHhccCcccccchhhhHHHH-HHHhCcCCchHHHHHHHHHHHH
Confidence 4433 2368888877777777666666677777543222121222222 334567777654 333333344
Q ss_pred HHHHhhhHHHHHHhhhccCccchh---H---hHH---------HHHH-----------HHHHHHHHH-------HHH---
Q 014600 264 LVVNVSQAYLAFYVINDLRMGQSA---K---ALV---------PAII-----------YICSFIVSI-------LLQ--- 307 (422)
Q Consensus 264 ~~~~~~~~y~~~y~~~~~~l~~~~---~---~~i---------P~~~-----------~~~~~~~~~-------~~~--- 307 (422)
........+++.|..+..+..... . ..+ |..- ...+..... ..+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (408)
T PRK09874 233 VATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPL 312 (408)
T ss_pred HHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHH
Confidence 445556677787877643322110 0 001 1000 001110000 000
Q ss_pred -------HHH-------h---hhhhhhhcCccccccceehhhHHHHHHHHHHHHHHHHHhHhhCCCc
Q 014600 308 -------VTG-------I---SMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSYQSMSPTV 357 (422)
Q Consensus 308 -------v~~-------~---~~~~~~~g~r~~g~~~~~s~~~~~~K~~~a~~~~i~g~~l~~~Gy~ 357 (422)
+.+ + .+..+..++++.|. .++.++..+++|+++|+.+.|.+.+..||.
T Consensus 313 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~--~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~ 377 (408)
T PRK09874 313 QLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGR--IFSYNQSFRDIGNVTGPLMGAAISANYGFR 377 (408)
T ss_pred HHHHHHHHHHhhhHhhHHHHHHHHHHhCCccccee--eehHHHHHHHHHHHhhHHHHHHHHhhcchh
Confidence 001 1 12234556677788 999999999999999999999998777764
No 21
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.81 E-value=2.3e-17 Score=162.62 Aligned_cols=283 Identities=13% Similarity=0.091 Sum_probs=191.6
Q ss_pred HHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCccchhh
Q 014600 46 YLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVE 125 (422)
Q Consensus 46 ~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~~~~ 125 (422)
..+.+..+.|+++.++|++.++..+...+..|+.|+++||+||||. +..+.+..+++..++.. .+ +.+
T Consensus 16 ~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~-~~~~~~~~~~~~~~~~~-------~~--~~~-- 83 (399)
T TIGR00893 16 AAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKT-LAVFIVIWGVFTGLQAF-------AG--AYV-- 83 (399)
T ss_pred hHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCccee-eHHHHHHHHHHHHHHHH-------Hc--CHH--
Confidence 3344334449999999999999999999999999999999999988 45666666666544331 11 111
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchHHHHHHH
Q 014600 126 TISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWI 205 (422)
Q Consensus 126 ~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~~~~~~~~~~ 205 (422)
.+.+..++.+++.+....+..++..|..+ ++||++..++......+|.++++.+...+.+ ..+|++.
T Consensus 84 --~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~----------~~~~~~~ 150 (399)
T TIGR00893 84 --SLYILRVLLGAAEAPFFPGIILIVASWFP-ASERATAVSIFNSAQGLGGIIGGPLVGWILI----------HFSWQWA 150 (399)
T ss_pred --HHHHHHHHHHHHHHhhhhHHHHHHHHhCC-HHHHHHHHHHHHHhchHHHHHHHHHHHHHHH----------hCCchHH
Confidence 22333457888888888888999999986 6899999999999999998888766654443 2368888
Q ss_pred HHHHHHHHHHHHhhhhccccCcccccc-----cC---------------CCcchhhhHHHHHHhHHHHHHHHHHHHHHHH
Q 014600 206 AYSSIFIGCCFVGIFLSRTEEPRLKMG-----LR---------------GNSHARISWAYWFKKILYYQVALVYMLTRLV 265 (422)
Q Consensus 206 ~~i~~~i~~i~~~i~~~~~~E~~~~~~-----~~---------------~~~~~~~~~~~~~~n~~f~~~~~~~~~~~~~ 265 (422)
+.+.+++.++..++.++..||++.+++ ++ ++.+..+..++.+|||+++......++....
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (399)
T TIGR00893 151 FIIEGVLGIIWGVLWLKFIPDPPQKAKWLTEEEKYIVVGGLLAEQQGKGPSTPKKYQIKELLKDRRVWGLALGQFLVNIG 230 (399)
T ss_pred HHHHHHHHHHHHHHhhheecCCCCccccCCHHHHhhcchhhccccccccccCCCccchHHHhcCHHHHHHHHHHHHHHhH
Confidence 887777777666666666666543110 00 0011223467889999988877777777777
Q ss_pred HHhhhHHHHHHhhhccCccchhHh---H---------HHHHH-------------------HHHHHH-HHHH---H----
Q 014600 266 VNVSQAYLAFYVINDLRMGQSAKA---L---------VPAII-------------------YICSFI-VSIL---L---- 306 (422)
Q Consensus 266 ~~~~~~y~~~y~~~~~~l~~~~~~---~---------iP~~~-------------------~~~~~~-~~~~---~---- 306 (422)
......++|.|+.+..+.+..... . .+... ...+.+ .... .
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (399)
T TIGR00893 231 LGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYVN 310 (399)
T ss_pred HHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccch
Confidence 778888999999887776543211 0 00000 000000 0000 0
Q ss_pred H--------HH----------HhhhhhhhhcCccccccceehhhHHHHHHHHHHHHHHHHHhHhhCC
Q 014600 307 Q--------VT----------GISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSYQSMSP 355 (422)
Q Consensus 307 ~--------v~----------~~~~~~~~~g~r~~g~~~~~s~~~~~~K~~~a~~~~i~g~~l~~~G 355 (422)
. .. ...+..+..++++.|. .+|..+...++|..+++.+.|.+.+..|
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~~~~~~~~~~~g~~~~~~i~g~l~~~~g 375 (399)
T TIGR00893 311 IPYAALALVALGFFGLGAGAIGWALISDNAPGNIAGL--TGGLINSLGNLGGIVGPIVIGAIAATTG 375 (399)
T ss_pred hHHHHHHHHHHHHhchhhhhHHHHHHHhhcChhHHHH--HHHHHHHHHHHhhhhhhHHhhhhccCCC
Confidence 0 00 1223455667778888 9999999999999999999999988766
No 22
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.81 E-value=3.5e-17 Score=165.54 Aligned_cols=289 Identities=12% Similarity=0.087 Sum_probs=185.6
Q ss_pred HHHHHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCcc
Q 014600 42 CWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTST 121 (422)
Q Consensus 42 ~~~~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~ 121 (422)
....+++.+.++.|+|+.++|++.++..+..++..|+.|+++||+||||. +..+.+..+++..+.-. .+ +
T Consensus 41 ~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~-~~~~~~~~~~~~~~~~~-------~~--~ 110 (434)
T PRK11663 41 SFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYF-MGIGLIATGIINILFGF-------SS--S 110 (434)
T ss_pred hHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchh-HHHHHHHHHHHHHHHHH-------Hh--H
Confidence 44556677777679999999999999999999999999999999999887 56677777766544321 11 1
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchHHH
Q 014600 122 LKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQ 201 (422)
Q Consensus 122 ~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~~~~~~ 201 (422)
.+ .+.+...+.+++.+....+..+++.++.+ ++||++..++.+....+|..+++.+.+.+.+ ..+
T Consensus 111 ~~----~l~~~~~l~g~~~g~~~~~~~~~~~~~~~-~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~----------~~g 175 (434)
T PRK11663 111 LW----AFALLWVLNAFFQGWGWPVCAKLLTAWYS-RTERGGWWAIWNTAHNVGGALIPLVVGAIAL----------HYG 175 (434)
T ss_pred HH----HHHHHHHHHHHHHHccchHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------ccc
Confidence 11 11222234566666666677888899875 6789999999999888988887766555442 237
Q ss_pred HHHHHHHHHHHHHHHHhhhhccccCccccc---------cc-----CCC----cchhhhHH-HHHHhHHHHHHHHHHHHH
Q 014600 202 YRWIAYSSIFIGCCFVGIFLSRTEEPRLKM---------GL-----RGN----SHARISWA-YWFKKILYYQVALVYMLT 262 (422)
Q Consensus 202 ~~~~~~i~~~i~~i~~~i~~~~~~E~~~~~---------~~-----~~~----~~~~~~~~-~~~~n~~f~~~~~~~~~~ 262 (422)
|++.+.+.+++.++..++.++..||++.+. ++ +++ .+.++.++ ..+|||.++.+...+++.
T Consensus 176 w~~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (434)
T PRK11663 176 WRYGMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWRHDALELAQQQEGAGLSRKEILTKYVLLNPYIWLLSFSYVLV 255 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCcccccccccccchhccccCCChhhhHHHHHhcChHHHHHHHHHHHH
Confidence 888888777766655554555566654211 00 000 11122222 356778877766666666
Q ss_pred HHHHHhhhHHHHHHhhhccCccchhHhHH----------------------------HHH-HHHHHHHHHH---H-HH--
Q 014600 263 RLVVNVSQAYLAFYVINDLRMGQSAKALV----------------------------PAI-IYICSFIVSI---L-LQ-- 307 (422)
Q Consensus 263 ~~~~~~~~~y~~~y~~~~~~l~~~~~~~i----------------------------P~~-~~~~~~~~~~---~-~~-- 307 (422)
.........++|.|+.++.+++....... +.. ....+..... . ..
T Consensus 256 ~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 335 (434)
T PRK11663 256 YVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMPFA 335 (434)
T ss_pred HHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHcccc
Confidence 66666777899999987777765431100 000 0000000000 0 00
Q ss_pred ----------HHH-----h-----hhhhhhhcCccccccceehhhHHHHHHHHHHHHHHHHHhHhhCCCc
Q 014600 308 ----------VTG-----I-----SMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSYQSMSPTV 357 (422)
Q Consensus 308 ----------v~~-----~-----~~~~~~~g~r~~g~~~~~s~~~~~~K~~~a~~~~i~g~~l~~~Gy~ 357 (422)
..+ + ....+..+++..|. ..|..++..++|+++++.+.|++.+..||+
T Consensus 336 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~--~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~ 403 (434)
T PRK11663 336 SYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGA--ATGFVGLFAYLGAALSGYPLAKVLEIWHWT 403 (434)
T ss_pred cHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHh--HHHHHHHHHHHHHHHhcccHHHHHHhcccH
Confidence 001 0 01234445667777 899999999999999999999999988764
No 23
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.81 E-value=2e-17 Score=166.17 Aligned_cols=307 Identities=10% Similarity=0.000 Sum_probs=190.7
Q ss_pred eeeeccchhHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHH
Q 014600 27 LYYGSGHMLNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSS 106 (422)
Q Consensus 27 ~~y~~g~~~~~~~~~~~~~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~ 106 (422)
..+-.+.+...+...+....++.+..+.+.++.++|++.....+...+..|+.|+++||+||||. +..+.+..++++..
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~-l~~~~~~~~~~~~~ 98 (417)
T PRK10489 20 RAVFIARFISIFGLGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKL-ILLARGTCGLGFIG 98 (417)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceE-EEehHHHHHHHHHH
Confidence 33444566666666777777888877777799999999999999999999999999999999988 44565555555433
Q ss_pred hhcCccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 014600 107 VFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIV 186 (422)
Q Consensus 107 lf~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l 186 (422)
+.. + .+....+.+ ...+..++.+++.+....+..++.+++.+ +++|++..+.......+|..+++.+++.+
T Consensus 99 ~~~---~-~~~~~~~~~----~l~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~g~~l~g~l 169 (417)
T PRK10489 99 LAL---N-AFLPEPSLL----AIYLLGLWDGFFGSLGVTALLAATPALVG-RENLMQAGAITMLTVRLGSVISPALGGLL 169 (417)
T ss_pred HHH---H-HHcCCCcHH----HHHHHHHHHHHHHHHHHHHHhhhhhhccC-HHHHHHHHHHHHHHHhHHHHhHHHHHHHH
Confidence 210 0 000111111 12223345677777777788889999886 57899999998888888888888777655
Q ss_pred HhhccCCCCCchHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccC--CCcchhhhHHHHHHhHHHHHHHHHHHHHHH
Q 014600 187 FSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLR--GNSHARISWAYWFKKILYYQVALVYMLTRL 264 (422)
Q Consensus 187 ~~~~~~~g~~~~~~~~~~~~~i~~~i~~i~~~i~~~~~~E~~~~~~~~--~~~~~~~~~~~~~~n~~f~~~~~~~~~~~~ 264 (422)
.+. .+|+|.+.+.++..++.. ++.+.+||.+.+++++ +.++.++.++..+|||.++...+..++...
T Consensus 170 ~~~----------~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (417)
T PRK10489 170 IAA----------GGVAWNYGLAAAGTFITL-LPLLRLPALPPPPQPREHPLRSLLAGFRFLLASPVVGGIALLGGLLTM 238 (417)
T ss_pred HHH----------HhhHHHHHHHHHHHHHHH-HHHHhCCCCCCCCcccccchHHHHHHHHHHHcChHHHHHHHHHHHHHH
Confidence 532 366776666555444443 3344555543221111 112334556778888887655443333222
Q ss_pred HHHhhhHHHHHHhhhccCccchhHhHHH----H-------H------------HHHHHHHHH---HHH----H-------
Q 014600 265 VVNVSQAYLAFYVINDLRMGQSAKALVP----A-------I------------IYICSFIVS---ILL----Q------- 307 (422)
Q Consensus 265 ~~~~~~~y~~~y~~~~~~l~~~~~~~iP----~-------~------------~~~~~~~~~---~~~----~------- 307 (422)
......++|.|..+..+.+....+.+- . . ....+.+.. ++. +
T Consensus 239 -~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (417)
T PRK10489 239 -ASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVL 317 (417)
T ss_pred -HHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHH
Confidence 345677889999886776654321000 0 0 001111000 000 0
Q ss_pred ---HHH----------hhhhhhhhcCccccccceehhhHHHHHHHHHHHHHHHHHhHhhCCCc
Q 014600 308 ---VTG----------ISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSYQSMSPTV 357 (422)
Q Consensus 308 ---v~~----------~~~~~~~~g~r~~g~~~~~s~~~~~~K~~~a~~~~i~g~~l~~~Gy~ 357 (422)
+.+ .....+...++..|. .+|..+....+|+++|+.+.|++.+..|+.
T Consensus 318 ~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~--~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~ 378 (417)
T PRK10489 318 CLALFGYLSAISSLLQYTLLQTQTPDEMLGR--INGLWTAQNVTGDAIGAALLGGLGAMMTPV 378 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCHHHHHH--HHHHHHHHHhhhHhHHHHHHHHHHHHhchh
Confidence 001 112234445666777 899999999999999999999998887653
No 24
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.80 E-value=1.9e-17 Score=159.94 Aligned_cols=323 Identities=11% Similarity=0.063 Sum_probs=222.6
Q ss_pred CCCCceeeeeeeccchhHHHHHHHHH-HHHHHHHHHh-C---CC----hhHHHHHHHHHHHHhhhhhhhhhhhhcccCCc
Q 014600 19 QPVGRWSVLYYGSGHMLNDITAACWF-TYLLLFLTDI-G---LS----PRGAAAVMLSGQIADGFATIFIGELIDRFGHF 89 (422)
Q Consensus 19 ~~l~~~~~~~y~~g~~~~~~~~~~~~-~~l~~f~t~~-g---ls----~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grr 89 (422)
++...+...+|.+.|++++-...++. .++|.|+++. + .+ .+..|...+++.+.-++..|+.|.++|+.|+|
T Consensus 9 ~~~~~~~~~sWilyD~~~~p~~~ivtt~ifply~~~~~~~~g~~~~~~~a~~gy~~aia~llia~LapiLG~iaD~~g~R 88 (438)
T COG2270 9 MPKLRKGIKSWILYDWGSSPFFAIVTTFIFPLYFTSVAGAGGVDPASSTAYWGYASAIAGLLIALLAPILGTIADYPGPR 88 (438)
T ss_pred cccccccceeEEEeeccCCceeeeeeeehhHHHHHHHHhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhccCCCc
Confidence 33455667888888988877665554 5789999985 3 23 46789999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHhhcCccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHH
Q 014600 90 KIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRN 169 (422)
Q Consensus 90 rp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~ 169 (422)
|+|+-..+.+-.++..++|+ +| +.+.++..+.+ .++..+++.+.+++|++++++.++ +++-+++++...
T Consensus 89 k~~~~~f~~i~i~~~~~L~~--i~-----~~s~~~~~l~~---~il~~i~~~~s~Vfyds~L~~~~~-k~~~~riS~lg~ 157 (438)
T COG2270 89 KKFFGFFTAIGIISTFLLWF--IP-----PGSYLLLLLLF---LILASIGFEFSNVFYDSMLPRLTT-KDNMGRISGLGW 157 (438)
T ss_pred chHHHHHHHHHHHHHHHHHH--hC-----CCchHHHHHHH---HHHHHHhcchhheehhhHhhhhcC-ccccCccccccc
Confidence 99998888888887777774 33 22333332222 246788899999999999999986 556677888877
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCC-------CC-CchHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccCCC-----
Q 014600 170 AFTMVANLSLYAIAFIVFSVSTAK-------TH-ADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGN----- 236 (422)
Q Consensus 170 ~~~~ig~~l~~~~~~~l~~~~~~~-------g~-~~~~~~~~~~~~i~~~i~~i~~~i~~~~~~E~~~~~~~~~~----- 236 (422)
..+++|+.+..++....+...+.. |. ......-|..+.+.++..++..+-.++.+|+.+... ++++
T Consensus 158 ~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm~~~v~~~~~~~-~~~~~~l~~ 236 (438)
T COG2270 158 ALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPMILNVHDAEKIS-SPPPTALRN 236 (438)
T ss_pred ccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhHHHhccccccccc-ccchHHHHH
Confidence 788888876554432221111100 00 011234566777777777777777788888865321 1111
Q ss_pred --cchhhhHHHHHHhHHHHHHHHHHHHHHHHHHhhhHHHHHHhhhccCccchhHhHHHHHHHHHHHHHHHHHH-------
Q 014600 237 --SHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQ------- 307 (422)
Q Consensus 237 --~~~~~~~~~~~~n~~f~~~~~~~~~~~~~~~~~~~y~~~y~~~~~~l~~~~~~~iP~~~~~~~~~~~~~~~------- 307 (422)
++.++.+|++.+.|....+++.+++.+-+.++....-..|-.++.+++...+..+-...-+.+...+++.+
T Consensus 237 g~k~L~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg 316 (438)
T COG2270 237 GFKELKSTFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFG 316 (438)
T ss_pred HHHHHHHHHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 23456677777888888888999998888888888888899989998876643222111111111110000
Q ss_pred ---------------------------------HH----------HhhhhhhhhcCccccccceehhhHHHHHHHHHHHH
Q 014600 308 ---------------------------------VT----------GISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAV 344 (422)
Q Consensus 308 ---------------------------------v~----------~~~~~~~~~g~r~~g~~~~~s~~~~~~K~~~a~~~ 344 (422)
+. +.+......-+++||. +||.++...|.++-+|+
T Consensus 317 ~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~--fFglyaltgra~S~~gp 394 (438)
T COG2270 317 SKPVLMIGLVILSIAALYLIFLEGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGR--FFGLYALTGRAASFLGP 394 (438)
T ss_pred CceeehHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccc--eeehhhhhhhHHHHHHH
Confidence 00 1233444556789999 99999999999999999
Q ss_pred HHHHHhHhhCC
Q 014600 345 YVLQSYQSMSP 355 (422)
Q Consensus 345 ~i~g~~l~~~G 355 (422)
...+.+.+.+|
T Consensus 395 ~lv~v~t~iTg 405 (438)
T COG2270 395 FLVAVITQITG 405 (438)
T ss_pred HHHHHHHHHhc
Confidence 99999988776
No 25
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.79 E-value=2.3e-16 Score=156.05 Aligned_cols=288 Identities=10% Similarity=0.027 Sum_probs=195.0
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCc
Q 014600 35 LNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPC 114 (422)
Q Consensus 35 ~~~~~~~~~~~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~ 114 (422)
.++..+......+|...+|.|+++.+.|++.+...+..++..+..|+++||+|||+. +. +.....+.......
T Consensus 2 ~~~~~~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~-~~-~~~~~~~~~~~~~~----- 74 (368)
T TIGR00903 2 ASQAIWVTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWF-LF-GSLATFAAAAGRLL----- 74 (368)
T ss_pred hhhHHHHHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHH-HH-HHHHHHHHHHHHHH-----
Confidence 456667777777777777779999999999999999999999999999999998765 43 33333333222111
Q ss_pred cccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCC
Q 014600 115 RILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKT 194 (422)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g 194 (422)
.. .+. ..+++.+++.+++.+.. .+..+..+|..+ ++||++..++...+..+|.++++.++.++..
T Consensus 75 --~~-~~~----~~l~~~R~l~G~g~~~~-~~~~~~~~~~~~-~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~------ 139 (368)
T TIGR00903 75 --DP-FNY----EWLLACQLLAALGQPFL-LNAFAPAASQIR-EERRDLVISLLSFAMYLGIIFALAAGLKIYT------ 139 (368)
T ss_pred --Hh-ccH----HHHHHHHHHHHhHhHHH-HHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------
Confidence 10 111 22333445677777653 445555688876 6899999999999999999998877766543
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccC-CCcchhhhHHHHHHhHHHHHHHHHHHHHHHHHHhhhHHH
Q 014600 195 HADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLR-GNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYL 273 (422)
Q Consensus 195 ~~~~~~~~~~~~~i~~~i~~i~~~i~~~~~~E~~~~~~~~-~~~~~~~~~~~~~~n~~f~~~~~~~~~~~~~~~~~~~y~ 273 (422)
..+||+.+.+.++++++..++.++.+||++.+++++ +..+..+.+++++|||.++.+...+++......+..+|.
T Consensus 140 ----~~gWr~~f~~~~~l~~~~~~~~~~~lp~~p~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wl 215 (368)
T TIGR00903 140 ----AGGLQLLIIPIAAVAAAGIILVLAALPALPFQAAEGFGFKDAVKEFGALAGRKDLWIIGAILGFGVALFDNLAIWL 215 (368)
T ss_pred ----ccchHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCcchHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHH
Confidence 248999999888888888777888889865432211 111222457889999999888888888888888889999
Q ss_pred HHHhhhccCccchh--HhHHHHHH------H--------------H------HHHHHHHHH---H---------HH----
Q 014600 274 AFYVINDLRMGQSA--KALVPAII------Y--------------I------CSFIVSILL---Q---------VT---- 309 (422)
Q Consensus 274 ~~y~~~~~~l~~~~--~~~iP~~~------~--------------~------~~~~~~~~~---~---------v~---- 309 (422)
|.|+.+ .+++... ...+|... + . .+.....+. + +.
T Consensus 216 p~~L~~-~g~s~~~~~~~~l~~~~g~~g~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~ 294 (368)
T TIGR00903 216 EAALRP-AGLEDIAGDAVALAILAGLIGVAVIPDRVARAGLRSIYIRAAALLIAAFFLALAFELNRLALFAFIGIAGLLM 294 (368)
T ss_pred HHHHHH-CCCChHHHHHHHHHHHHHHHHHHHhhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhh
Confidence 999976 3454321 11111110 0 0 000000000 0 00
Q ss_pred ------HhhhhhhhhcCccccccceehhhHHHHHHHHHHHHHHHHHhH
Q 014600 310 ------GISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSYQ 351 (422)
Q Consensus 310 ------~~~~~~~~~g~r~~g~~~~~s~~~~~~K~~~a~~~~i~g~~l 351 (422)
...+..+...++..|+ ..|..+...+++...++.+.+.++
T Consensus 295 ~~~~~~~~~~~~~~~p~~~rgt--~~G~~~~~g~~~~~~~~~~~~~~~ 340 (368)
T TIGR00903 295 LPAYAIIMDWIGKFCDKELHGK--AAGAIGFTSRAISVALALAAMLFI 340 (368)
T ss_pred hhhHHHHHHHHHHhcchhhcCc--ccchhhHHHHHHHHHHHHHHHHHh
Confidence 0123456677888888 999999999999889998888876
No 26
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.79 E-value=4.2e-17 Score=164.14 Aligned_cols=308 Identities=10% Similarity=0.022 Sum_probs=163.5
Q ss_pred eeeeccchhHHHHHHHHHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHH
Q 014600 27 LYYGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFS 105 (422)
Q Consensus 27 ~~y~~g~~~~~~~~~~~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~ 105 (422)
.......+...+.+....++++.|+++. |+++.++|++.++..+.+.+.+|+.|+++||+||||..+ .+....++...
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~-~~~~~~~~~~~ 91 (420)
T PRK09528 13 WIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLL-WIISGLLVLFG 91 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHH-HHHHHHHHHHH
Confidence 3344455666666777889999999996 999999999999999999999999999999999999854 33333333222
Q ss_pred HhhcCccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCC-ccchhhHHHHHHHHHHHHHHHHHHHHH
Q 014600 106 SVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLN-STSRVVLTSCRNAFTMVANLSLYAIAF 184 (422)
Q Consensus 106 ~lf~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~-~~eR~~l~~~~~~~~~ig~~l~~~~~~ 184 (422)
.++. .. .. ... . ..+.....+.++..+....+......+++++ .++|++..+.......+|..+++.+++
T Consensus 92 ~~~~--~~--~~---~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g 162 (420)
T PRK09528 92 PFFI--YV--FA---PLL-Q-YNILLGAIVGGIYLGFGFLAGAGAIEAYIERVSRRSGFEYGRARMWGSLGWALCAFIAG 162 (420)
T ss_pred HHHH--HH--HH---HHH-H-HHHHHHHHHHHHHhhhhhccchhhhhhHHHHHHhhccccchhhHHhhhHHHHHHHHHHH
Confidence 1110 00 00 000 0 0000000111222222222222233333321 234555556555667777777766654
Q ss_pred HHHhhccCCCCCchHHHHHHHHHHHHHHHHHHHhhhhccccCccccc---ccC---CCcchhhhHHHHHHhHHHHHHHHH
Q 014600 185 IVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKM---GLR---GNSHARISWAYWFKKILYYQVALV 258 (422)
Q Consensus 185 ~l~~~~~~~g~~~~~~~~~~~~~i~~~i~~i~~~i~~~~~~E~~~~~---~~~---~~~~~~~~~~~~~~n~~f~~~~~~ 258 (422)
.+.+ .+|++.+++.+++++++.++.++..+|+++++ +++ ++....+..++.+|||+++.+.+.
T Consensus 163 ~l~~-----------~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~l~ 231 (420)
T PRK09528 163 ILFN-----------INPQINFWLGSGSALILLVLLFFAKPDAPSTAKVANALGANASAVSLKDALALLKLPKFWFLVLY 231 (420)
T ss_pred HHHh-----------cCchHhHHHHHHHHHHHHHHHhcccccccchhhhccchhcccccccHHHHHHHccCCCeEeehHH
Confidence 4432 25666677666666665555554444433221 001 111123445678889987654443
Q ss_pred HHHHHHHHHhhhHHHHHHhhhcc---CccchhHh---H------HHHHH--------------HHHHHH-------HHHH
Q 014600 259 YMLTRLVVNVSQAYLAFYVINDL---RMGQSAKA---L------VPAII--------------YICSFI-------VSIL 305 (422)
Q Consensus 259 ~~~~~~~~~~~~~y~~~y~~~~~---~l~~~~~~---~------iP~~~--------------~~~~~~-------~~~~ 305 (422)
..+..........++|.|..+.. +.+..... . .+... ...+.+ ...+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~ 311 (420)
T PRK09528 232 VIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGF 311 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHh
Confidence 33333333333344555554321 22221110 0 00000 001000 0000
Q ss_pred HH----------HHH----------hhhhhhhhcCccccccceehh-hHHHHHHHHHHHHHHHHHhHhhCCCc
Q 014600 306 LQ----------VTG----------ISMQNVLVGEDLSGCAFVCGT-LSFLDKMSCGIAVYVLQSYQSMSPTV 357 (422)
Q Consensus 306 ~~----------v~~----------~~~~~~~~g~r~~g~~~~~s~-~~~~~K~~~a~~~~i~g~~l~~~Gy~ 357 (422)
.+ +.+ ....++..++|..++ .++. +++..++|..+++.+.|++.+..||.
T Consensus 312 ~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~--~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~ 382 (420)
T PRK09528 312 ATGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSAT--IYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQ 382 (420)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceee--eeeehHHHHHHHHHHHHHHHHHHHHHhhCch
Confidence 00 000 112345567777777 6665 68889999999999999999988875
No 27
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.79 E-value=2.7e-16 Score=153.27 Aligned_cols=311 Identities=10% Similarity=-0.052 Sum_probs=222.4
Q ss_pred CCCCCceeeeeeeccchhHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHH
Q 014600 18 TQPVGRWSVLYYGSGHMLNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGS 97 (422)
Q Consensus 18 ~~~l~~~~~~~y~~g~~~~~~~~~~~~~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~ 97 (422)
+++..+...+..+++.|.......+....++.--.|.|+|...+|.+.+++.+..+++.|+...+.||+.|||. ++...
T Consensus 7 ~~~~~~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~l-Ll~~l 85 (394)
T COG2814 7 ARKPMWLALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRL-LLGLL 85 (394)
T ss_pred ccccchHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHH-HHHHH
Confidence 45566677888999999988888888899999999999999999999999999999999999999999999988 55667
Q ss_pred HHHHHHHHHhhcCccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHH
Q 014600 98 VLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANL 177 (422)
Q Consensus 98 i~~~i~~~~lf~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~ 177 (422)
.++.++-.+... +++ +...++.+++.++..+.+..-..+..+++.+ +++|++..+.-..+..++.+
T Consensus 86 ~lFi~~n~l~al-------Ap~------f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvp-p~~~~~Aiaiv~~G~tlA~v 151 (394)
T COG2814 86 ALFIVSNLLSAL-------APS------FAVLLLARALAGLAHGVFWSIAAALAARLVP-PGKRGRALALVFTGLTLATV 151 (394)
T ss_pred HHHHHHHHHHHH-------hcc------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ccchhhHHHHHHHHHHHHHH
Confidence 777777655442 222 2334445566777777777777888889987 68999999988777777666
Q ss_pred HHHHHHHHHHhhccCCCCCchHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccCCCcchhhhHHHHHHhHHHHHHHH
Q 014600 178 SLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKKILYYQVAL 257 (422)
Q Consensus 178 l~~~~~~~l~~~~~~~g~~~~~~~~~~~~~i~~~i~~i~~~i~~~~~~E~~~~~~~~~~~~~~~~~~~~~~n~~f~~~~~ 257 (422)
++ .|+-..++ +..|||..|.+.+.+++++.+..+..+| ++.. +++.+.+.++. .+.+|||..+....
T Consensus 152 ~G----vPLGt~ig------~~~GWR~~F~~ia~l~ll~~~~~~~~lP-~~~~-~~~~~~~~~~~-~~~l~~p~v~~~l~ 218 (394)
T COG2814 152 LG----VPLGTFLG------QLFGWRATFLAIAVLALLALLLLWKLLP-PSEI-SGSLPGPLRTL-LRLLRRPGVLLGLL 218 (394)
T ss_pred Hh----ccHHHHHH------HHhhHHHHHHHHHHHHHHHHHHHHHhCC-CccC-CCCCCcchhHH-HHHhcCchHHHHHH
Confidence 54 45555543 3579999999999999999888888888 2211 11222233333 57789999888777
Q ss_pred HHHHHHHHHHhhhHHHHHHhhhccCccchhHhHHHHHHHHHHH------------------------------HHHHHHH
Q 014600 258 VYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSF------------------------------IVSILLQ 307 (422)
Q Consensus 258 ~~~~~~~~~~~~~~y~~~y~~~~~~l~~~~~~~iP~~~~~~~~------------------------------~~~~~~~ 307 (422)
..++...+.....+|.-.++++..+++.+....+-+..-+.+. .+.+..+
T Consensus 219 ~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr~~~~~l~~~~~l~a~~~l~l~~~~~ 298 (394)
T COG2814 219 ATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADRGPRRALIAALLLLALALLALTFTGA 298 (394)
T ss_pred HHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHhcc
Confidence 7777777888889999999999999877543211110000000 0000000
Q ss_pred ----------HHH----hhhhhh---hhc--CccccccceehhhHHHHHHHHHHHHHHHHHhHhhCCCcc
Q 014600 308 ----------VTG----ISMQNV---LVG--EDLSGCAFVCGTLSFLDKMSCGIAVYVLQSYQSMSPTVL 358 (422)
Q Consensus 308 ----------v~~----~~~~~~---~~g--~r~~g~~~~~s~~~~~~K~~~a~~~~i~g~~l~~~Gy~~ 358 (422)
+.+ +....+ ... .+..+. ..|.+.-..++|.++|+.+.|.+++..||..
T Consensus 299 ~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~p~~~~~--a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~ 366 (394)
T COG2814 299 SPALALALLFLWGFAFSPALQGLQTRLARLAPDAADL--AGSLNVAAFNLGIALGAALGGLVLDALGYAA 366 (394)
T ss_pred hHHHHHHHHHHHHHHhhhhhhHHHHHhcccCCCchHH--HHHHHHHHHHHHHHHHHHHHHHHHHhhchHH
Confidence 001 111111 112 245555 7899999999999999999999999988854
No 28
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.79 E-value=1.5e-16 Score=156.15 Aligned_cols=286 Identities=10% Similarity=-0.028 Sum_probs=176.4
Q ss_pred HHHHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCccc
Q 014600 43 WFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTL 122 (422)
Q Consensus 43 ~~~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~ 122 (422)
+..++|.+-++.|++..++|++.++..+..++.+|+.|+++||+||||.++ .+..+.+++..+... .+ +.
T Consensus 22 ~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~-~~~~~~~~~~~~~~~-------~~--~~ 91 (377)
T TIGR00890 22 WTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAM-LGGILYGLGFTFYAI-------AD--SL 91 (377)
T ss_pred hhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhH-HhHHHHHHHHHHHHH-------HH--HH
Confidence 334444444445999999999999999999999999999999999999854 567777766544321 11 11
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchHHHH
Q 014600 123 KVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQY 202 (422)
Q Consensus 123 ~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~~~~~~~ 202 (422)
+ .+.+.+.+.+++.+....+......+.. ++||++..++...+..+|.++++ |+...+. ...+|
T Consensus 92 ~----~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~----~~~~~~~------~~~~~ 155 (377)
T TIGR00890 92 A----ALYLTYGLASAGVGIAYGIALNTAVKWF--PDKRGLASGIIIGGYGLGSFILS----PLITSVI------NLEGV 155 (377)
T ss_pred H----HHHHHHHHHhHHHHHHHHhHHHHHHHHc--CcccHHHHHHHHHhcchhHhHHH----HHHHHHH------hcccH
Confidence 1 1222233556666555444455566655 46899999988887777766543 3333221 12479
Q ss_pred HHHHHHHHHHHHHHHhhhhccccCccccccc--CCCcchhhhHHHHHHhHHHHHHHHHHHHHHHHHHhhhHHHHHHhhhc
Q 014600 203 RWIAYSSIFIGCCFVGIFLSRTEEPRLKMGL--RGNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVIND 280 (422)
Q Consensus 203 ~~~~~i~~~i~~i~~~i~~~~~~E~~~~~~~--~~~~~~~~~~~~~~~n~~f~~~~~~~~~~~~~~~~~~~y~~~y~~~~ 280 (422)
++.+.+.+++.++..+++++.+||++.++++ ++..+.+...++.+|||+++.....+++..........+++.|..+
T Consensus 156 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 234 (377)
T TIGR00890 156 PAAFIYMGIIFLLVIVLGAFLIGYPPGQLIKTNIEVSVKDYTVWEMLRTPQFWVLYLSFFLNAVSGLLLIGLYKPYGQS- 234 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHheecCchhccccCcccchhhhhHHHHHcCccHHHHHHHHHHHhHHHHHHHHHHHHHHHH-
Confidence 9998888888877777777777765432211 1111223345778899988766655555444444455566666543
Q ss_pred cCccchhHh---HHH---------HHH-----------H-------HHHHHHHHHHH------------HHH--------
Q 014600 281 LRMGQSAKA---LVP---------AII-----------Y-------ICSFIVSILLQ------------VTG-------- 310 (422)
Q Consensus 281 ~~l~~~~~~---~iP---------~~~-----------~-------~~~~~~~~~~~------------v~~-------- 310 (422)
.+.+..... .++ ... . ..+........ +.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~ 314 (377)
T TIGR00890 235 LGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTWGGTIS 314 (377)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHhccchh
Confidence 454432211 000 000 0 00000000000 000
Q ss_pred --hhhhhhhhcCccccccceehhhHHHHHHHHHHHHHHHHHhHhhCCCc
Q 014600 311 --ISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSYQSMSPTV 357 (422)
Q Consensus 311 --~~~~~~~~g~r~~g~~~~~s~~~~~~K~~~a~~~~i~g~~l~~~Gy~ 357 (422)
..+..+..++++.|. .+|..+...++|+.+++.+.|.+.+..||.
T Consensus 315 ~~~~~~~~~~~~~~~~~--~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~ 361 (377)
T TIGR00890 315 LFPSLVSDIFGPANSAA--NYGFLYTAKAVAGIFGGLIASHALTEIGFE 361 (377)
T ss_pred ccHHHHHHHhhhhhhhh--HhHHHHHHHHHHHHHHHHHHHHHHhhhchh
Confidence 223456677788888 999999999999999999999998877764
No 29
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.78 E-value=4e-17 Score=160.41 Aligned_cols=289 Identities=15% Similarity=0.103 Sum_probs=190.4
Q ss_pred HHHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCc
Q 014600 42 CWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTS 120 (422)
Q Consensus 42 ~~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~ 120 (422)
......+ ++.+. |++..++|++.++..+...+..|+.|+++||+||||. ++.+..+.+++..++.. .+
T Consensus 13 ~~~~~~~-~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~-~~~~~~~~~~~~~~~~~-------~~-- 81 (379)
T TIGR00881 13 NFALAMP-YLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVF-LPIGLILCAIVNLFFGF-------ST-- 81 (379)
T ss_pred hhhhhhH-HHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeeh-hHHHHHHHHHHHHHHHH-------hh--
Confidence 3333444 45554 9999999999999999999999999999999999987 55677777776655432 11
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHH-HHHHHHHhhccCCCCCchH
Q 014600 121 TLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLY-AIAFIVFSVSTAKTHADLE 199 (422)
Q Consensus 121 ~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~-~~~~~l~~~~~~~g~~~~~ 199 (422)
+.+ .+++...+.+++.+....+..++.+|+.+ ++||++..++......+|..+++ .+...+.. .
T Consensus 82 ~~~----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~----------~ 146 (379)
T TIGR00881 82 SLW----VMAALWALNGIFQGMGWPPCGRTVTKWFS-RSERGTWVSFWNCSHNVGGGLLPPLVLFGIAE----------L 146 (379)
T ss_pred hHH----HHHHHHHHHHhhccccCCchHHHHHHhcC-HhhheeeEeehhccchhHHHHHHHHHHHHHHh----------c
Confidence 111 22233346777777778888889999876 67899999998888888888776 23322211 2
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhccccCccccc-----cc---CC-------C----cchhhhHHHHHHhHHHHHHHHHHH
Q 014600 200 NQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKM-----GL---RG-------N----SHARISWAYWFKKILYYQVALVYM 260 (422)
Q Consensus 200 ~~~~~~~~i~~~i~~i~~~i~~~~~~E~~~~~-----~~---~~-------~----~~~~~~~~~~~~n~~f~~~~~~~~ 260 (422)
.+|++.+.+.+++.++..+++++..||++.++ ++ ++ + .+.+...+.++|||.++.+.+.++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (379)
T TIGR00881 147 YSWHWVFIVPGIIAIIVSLICFLLLRDSPQSCGLPPAEEMPNEEPDGDAEKKEEELTKKQIFLQYVLLNKVLWYISLGYV 226 (379)
T ss_pred CCchhHHHHHHHHHHHHHHHHheeeCCCccccccCccccCcccccccccccccccccchHHHHHHHHhcchHHHHHHHHH
Confidence 36788877777777666666666666643211 00 00 0 111234567889998887777777
Q ss_pred HHHHHHHhhhHHHHHHhhhccCccchhHhHH------------HHHH----------------H-HHHHHHHHHH-----
Q 014600 261 LTRLVVNVSQAYLAFYVINDLRMGQSAKALV------------PAII----------------Y-ICSFIVSILL----- 306 (422)
Q Consensus 261 ~~~~~~~~~~~y~~~y~~~~~~l~~~~~~~i------------P~~~----------------~-~~~~~~~~~~----- 306 (422)
+..........+.|.|+.+..+.+....... +... . ..........
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (379)
T TIGR00881 227 FVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLNP 306 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcCc
Confidence 7667777788899999988777665332100 0000 0 0000000000
Q ss_pred --H---------HHH----------hhhhhhhhcCccccccceehhhHHHHHHHHHHHHHHHHHhHhhCCCcc
Q 014600 307 --Q---------VTG----------ISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSYQSMSPTVL 358 (422)
Q Consensus 307 --~---------v~~----------~~~~~~~~g~r~~g~~~~~s~~~~~~K~~~a~~~~i~g~~l~~~Gy~~ 358 (422)
. ..+ ..+..+..++++.|. ..|..+...+++..+++.+.|.+.+..||+.
T Consensus 307 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~--~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~ 377 (379)
T TIGR00881 307 AANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGT--AAGFVGFFAYLGGILAGLPLGYLADGFGWAG 377 (379)
T ss_pred chhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHH--HHHHHHHhhhhhhhhhhhhHHHHHHhhcccc
Confidence 0 001 112344566778888 9999999999999999999999999999864
No 30
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.78 E-value=1.4e-16 Score=158.37 Aligned_cols=308 Identities=13% Similarity=0.062 Sum_probs=187.1
Q ss_pred eeeeeeeccchhHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHH
Q 014600 24 WSVLYYGSGHMLNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVS 103 (422)
Q Consensus 24 ~~~~~y~~g~~~~~~~~~~~~~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~ 103 (422)
+......++.+...+.........+.+..+.|++..++|++.++..+..++.+|+.|+++||+||||+++ .+.+..+++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~-~~~~~~~~~ 90 (405)
T TIGR00891 12 NAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMV-TSIVLFSAG 90 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH-HHHHHHHHH
Confidence 3345555666666666666666666555555999999999999999999999999999999999999855 566666666
Q ss_pred HHHhhcCccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHH
Q 014600 104 FSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIA 183 (422)
Q Consensus 104 ~~~lf~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~ 183 (422)
..+... .+ +.+ .+.+...+.+++.+....+..++..|+.+ +++|++..++...+..+|.++++.+.
T Consensus 91 ~~~~~~-------~~--~~~----~l~~~~~l~G~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~l~ 156 (405)
T TIGR00891 91 TLACGF-------AP--GYI----TMFIARLVIGIGMGGEYGSSAAYVIESWP-KHLRNKASGLLISGYAVGAVVAAQVY 156 (405)
T ss_pred HHHHHH-------hc--cHH----HHHHHHHHHHhhhhhhhHHHHHHHHHhCC-hhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 544321 11 122 12233456788888888888999999986 57999999999999899988887766
Q ss_pred HHHHhhccCCCCCchHHHHHHHHHHHHHHHHHHHhhhhccccCccccccc-CCCcchhhhHHHHHH--------------
Q 014600 184 FIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGL-RGNSHARISWAYWFK-------------- 248 (422)
Q Consensus 184 ~~l~~~~~~~g~~~~~~~~~~~~~i~~~i~~i~~~i~~~~~~E~~~~~~~-~~~~~~~~~~~~~~~-------------- 248 (422)
..+.... ..+|++.+.+.++..++. ++.....||++..+++ +++...++..++..+
T Consensus 157 ~~l~~~~--------~~~w~~~f~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (405)
T TIGR00891 157 SLVVPVW--------GDGWRALFFISILPIIFA-LWLRKNIPEAEDWKEKHAGKALVRTMVDILYGGEHRIANIVMTLAA 227 (405)
T ss_pred HHHHHhc--------CccHHHHHHHHHHHHHHH-HHHHHhCCCChhHHHHhhhhhhhhhHHHHHhccchhhhhhhhhhhH
Confidence 5554421 125888877654444443 3344556765321110 000000111111110
Q ss_pred --------hHH-HHHHHHHHHHHHHHHHhhhHHHHHHhhhccCccchhHhHH------------HHHH-----------H
Q 014600 249 --------KIL-YYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALV------------PAII-----------Y 296 (422)
Q Consensus 249 --------n~~-f~~~~~~~~~~~~~~~~~~~y~~~y~~~~~~l~~~~~~~i------------P~~~-----------~ 296 (422)
++. +........+..........++|.|..++.+++......+ +... .
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~ 307 (405)
T TIGR00891 228 AMVQSAGKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAY 307 (405)
T ss_pred HhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhh
Confidence 001 1112222223333444566788989887777665432100 0000 0
Q ss_pred HHHHHHH------HHH--H----------HH----------HhhhhhhhhcCccccccceehhhHHHHHHHHHHHHHHHH
Q 014600 297 ICSFIVS------ILL--Q----------VT----------GISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQ 348 (422)
Q Consensus 297 ~~~~~~~------~~~--~----------v~----------~~~~~~~~~g~r~~g~~~~~s~~~~~~K~~~a~~~~i~g 348 (422)
..+.+.. ... . +. ...+..+..+++..|. .+|..+.+.+++..+++.+.|
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~~~~~~g~~~g~~~~g 385 (405)
T TIGR00891 308 VCSLLAGQLLIIPVFAIGANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQRAA--GLGFTYQLGNLGGALAPIIGA 385 (405)
T ss_pred HHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHccchhhHHHHHhhhCCcchhHH--HhhHHHHHHHHHHHHHHHHHH
Confidence 1110000 000 0 00 0122344556667787 899999999999999999999
Q ss_pred HhHhhCC-Cc
Q 014600 349 SYQSMSP-TV 357 (422)
Q Consensus 349 ~~l~~~G-y~ 357 (422)
.+.+..| |+
T Consensus 386 ~l~~~~g~~~ 395 (405)
T TIGR00891 386 LLAQRLDEYG 395 (405)
T ss_pred HHHHhccccc
Confidence 9999988 74
No 31
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.78 E-value=2.1e-16 Score=157.67 Aligned_cols=304 Identities=12% Similarity=0.054 Sum_probs=167.4
Q ss_pred cchhHHHHHHHHHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcC
Q 014600 32 GHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGG 110 (422)
Q Consensus 32 g~~~~~~~~~~~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~ 110 (422)
..+.....+....++++.|++|. |+++.++|++..+..+...+.+|+.|+++||+||||+.+. +....++.....+.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~-~~~~~~~~~~~~~~- 87 (396)
T TIGR00882 10 FFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLW-IISGLLVLFAPFFI- 87 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHH-HHHHHHHHHHHHHH-
Confidence 34445555667778999999987 9999999999999999999999999999999999998553 33333333221110
Q ss_pred ccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 014600 111 CMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVS 190 (422)
Q Consensus 111 ~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~ 190 (422)
.. ..+..... ......+..++.+++++.......++.++..+ ++++..+......++|..+++.+++.+.+
T Consensus 88 -~~--~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~---~~~~~~g~~~~~~~~g~~~g~~~~g~l~~-- 158 (396)
T TIGR00882 88 -YV--FGPLLQSN-ILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSR---NSNFEYGKARMFGCVGWALCASIAGILFS-- 158 (396)
T ss_pred -HH--hhhHHHHH-HHHHHHHHHHHHHHHhccchhhHHHHHHHhhh---hcccccchhhhhcccHHHHHHHHHhhhhc--
Confidence 00 00000000 01111111234555555555555555555332 22333334444556777666655433221
Q ss_pred cCCCCCchHHHHHHHHHHHHHHHHHHHhhhhccccCccccccc------CCCcchhhhHHHHHHhHHHHHHHHHHHHHHH
Q 014600 191 TAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGL------RGNSHARISWAYWFKKILYYQVALVYMLTRL 264 (422)
Q Consensus 191 ~~~g~~~~~~~~~~~~~i~~~i~~i~~~i~~~~~~E~~~~~~~------~~~~~~~~~~~~~~~n~~f~~~~~~~~~~~~ 264 (422)
.+|+..+.+.+.+.++..++.+...+|+++++++ +++++..+++++++|||+++.+++..++...
T Consensus 159 ---------~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~ 229 (396)
T TIGR00882 159 ---------IDPQIVFWLGSGFALILMLLLMFAKPKAPSSATVANALGANASAFSLKLALELFRQRKFWMFVLYVVGVAC 229 (396)
T ss_pred ---------cCchHHHHHHHHHHHHHHHHHHHhCCCCchhhhhhcccccccCCCCHHHHHHHHcCCcHHHHHHHHHHHHH
Confidence 2677777777666666655554444553322110 0111223457889999998765554444444
Q ss_pred HHHhhhHHHHHHhhhcc---CccchhH---hH------HHHHH--------------HHHHHHH---HHHH---------
Q 014600 265 VVNVSQAYLAFYVINDL---RMGQSAK---AL------VPAII--------------YICSFIV---SILL--------- 306 (422)
Q Consensus 265 ~~~~~~~y~~~y~~~~~---~l~~~~~---~~------iP~~~--------------~~~~~~~---~~~~--------- 306 (422)
.......+++.|..+.. +.+.... .. .+... .+.+.++ ....
T Consensus 230 ~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~ 309 (396)
T TIGR00882 230 VYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALE 309 (396)
T ss_pred HHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHH
Confidence 44444445566655432 2222111 00 00000 0111110 0000
Q ss_pred ----HH-HH----------hhhhhhhhcCccccccceehh-hHHHHHHHHHHHHHHHHHhHhhCCCc
Q 014600 307 ----QV-TG----------ISMQNVLVGEDLSGCAFVCGT-LSFLDKMSCGIAVYVLQSYQSMSPTV 357 (422)
Q Consensus 307 ----~v-~~----------~~~~~~~~g~r~~g~~~~~s~-~~~~~K~~~a~~~~i~g~~l~~~Gy~ 357 (422)
++ .+ ....++..++|.+++ ..+. .++..++|+.+++.+.|++++..||.
T Consensus 310 ~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at--~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~ 374 (396)
T TIGR00882 310 VVILKMLHAFEVPFLLVGCFKYITSQFDVRLSAT--IYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQ 374 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEE--eehHHHHHHHHHHHHHHHHhHHHHHHhcccH
Confidence 00 01 111344556777777 7766 68999999999999999999998884
No 32
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.77 E-value=6.3e-16 Score=154.38 Aligned_cols=215 Identities=12% Similarity=0.003 Sum_probs=147.2
Q ss_pred HHHHHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCcc
Q 014600 42 CWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTST 121 (422)
Q Consensus 42 ~~~~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~ 121 (422)
.....++.+.+|.|.++.++|...++..+..++..|+.|+++||+||||. ++.+.+..+++..+.-. .+ +
T Consensus 38 ~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~-~~~~~~~~~~~~~~~~~-------~~--~ 107 (394)
T PRK10213 38 LPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYV-VILFAVLLTLSCLLVSF-------AN--S 107 (394)
T ss_pred HHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHH-HHHHHHHHHHHHHHHHH-------HC--h
Confidence 44456777666679999999999999999999999999999999999988 45667777766544321 11 1
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchHHH
Q 014600 122 LKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQ 201 (422)
Q Consensus 122 ~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~~~~~~ 201 (422)
.+ .+.+.+.+.+++.+.......++.+|+.+ +++|++..+......++|..+++.+++.+.+ ..+
T Consensus 108 ~~----~l~~~r~l~G~~~g~~~~~~~~~i~~~~~-~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~----------~~g 172 (394)
T PRK10213 108 FS----LLLIGRACLGLALGGFWAMSASLTMRLVP-PRTVPKALSVIFGAVSIALVIAAPLGSFLGE----------LIG 172 (394)
T ss_pred HH----HHHHHHHHHHHhhHHHHHHHHHHHHHHcC-HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------hcC
Confidence 22 22334457788888888888899999986 6789999999888888888887776655443 237
Q ss_pred HHHHHHHHHHHHHHHHhhhhccccCcccccccCCCcchhhhHHHHHHhHHHHHHHHHHHHHHHHHHhhhHHHHHHhhhcc
Q 014600 202 YRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDL 281 (422)
Q Consensus 202 ~~~~~~i~~~i~~i~~~i~~~~~~E~~~~~~~~~~~~~~~~~~~~~~n~~f~~~~~~~~~~~~~~~~~~~y~~~y~~~~~ 281 (422)
|++.+.+.+++++++.+......||++.++ ++..+..++.+|||+++......++.........+|++.++.++.
T Consensus 173 w~~~f~~~~~l~~~~~l~~~~~~p~~~~~~-----~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 247 (394)
T PRK10213 173 WRNVFNAAAVMGVLCIFWIIKSLPSLPGEP-----SHQKQNTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLA 247 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCccc-----ccchhHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 888888877766665555444556643211 111233467789998876555444444444455667644444555
Q ss_pred Cccch
Q 014600 282 RMGQS 286 (422)
Q Consensus 282 ~l~~~ 286 (422)
+++..
T Consensus 248 g~s~~ 252 (394)
T PRK10213 248 GFGVD 252 (394)
T ss_pred CCChh
Confidence 66654
No 33
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.77 E-value=2.3e-17 Score=168.45 Aligned_cols=224 Identities=11% Similarity=0.003 Sum_probs=146.2
Q ss_pred HHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCccchhhh
Q 014600 47 LLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVET 126 (422)
Q Consensus 47 l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~~~~~ 126 (422)
++....|.|++..+.|++.+...+..++..|+.|+++||+||||. +..+.+..++...++-. .++..++ +.
T Consensus 52 ~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~-l~~~~~~~~~~~~~~~~--~~~~~~~--~~---- 122 (467)
T PRK09556 52 QNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQF-LPFLLILSAICMLGFGA--SLGSGSV--SL---- 122 (467)
T ss_pred hHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccch-HHHHHHHHHHHHHHHHH--HHhcccc--hH----
Confidence 444445559999999999999999999999999999999999987 44555555544332210 1111111 11
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchHHHHHHHH
Q 014600 127 ISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIA 206 (422)
Q Consensus 127 ~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~~~~~~~~~~~ 206 (422)
..+++.+.+.+++.+....+..++++++.+ ++||++..++......+|..+++.+...+..... ..+|+..+
T Consensus 123 ~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~-~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~-------~~~~~~~f 194 (467)
T PRK09556 123 GLMIALWALSGFFQSTGGPCSYSTITRWTP-RRKRGRFLGFWNISHNLGGAGAGGVALWGANYFF-------DGHVIGMF 194 (467)
T ss_pred HHHHHHHHHHHHHHhccchHHHHHHHHHcC-ccceeeeEEeeecccchhhhHHHHHHHHHHHhhc-------cCcchhHH
Confidence 122333446777777777778889999986 6789999999888888888887765544333210 01466666
Q ss_pred HHHHHHHHHHHhhhhccccCccccc-----------c--cCC----C--cchhhhH-HHHHHhHHHHHHHHHHHHHHHHH
Q 014600 207 YSSIFIGCCFVGIFLSRTEEPRLKM-----------G--LRG----N--SHARISW-AYWFKKILYYQVALVYMLTRLVV 266 (422)
Q Consensus 207 ~i~~~i~~i~~~i~~~~~~E~~~~~-----------~--~~~----~--~~~~~~~-~~~~~n~~f~~~~~~~~~~~~~~ 266 (422)
.+.++++++..++.++..+|+++++ + +++ + .+.++.+ +..+|||.++...+.+++.....
T Consensus 195 ~~~g~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 274 (467)
T PRK09556 195 IFPSIIALIIGFIGLRYGSDSPEELGWGKAEEIFGEPISEEDKETESTDMTKWQIFVEYVLKNPVIWLLCFANIFLYIVR 274 (467)
T ss_pred HHHHHHHHHHHHHHHHhCCCChhhcCCCChhhcccCccchhhhccccccCcHHHHHHHHHHcChHHHHHHHHHHHHHHHH
Confidence 6666666665555566655543210 0 000 0 0111222 34789999888777777776666
Q ss_pred HhhhHHHHHHhhhccCccchh
Q 014600 267 NVSQAYLAFYVINDLRMGQSA 287 (422)
Q Consensus 267 ~~~~~y~~~y~~~~~~l~~~~ 287 (422)
.+...|.|.|+.+..+++...
T Consensus 275 ~~~~~~~p~yl~~~~g~s~~~ 295 (467)
T PRK09556 275 IGIDNWSPVYAFQELGFSKED 295 (467)
T ss_pred HHHHHHHHHHHHHccCCCHHH
Confidence 778889999999888876543
No 34
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.76 E-value=1.3e-15 Score=152.38 Aligned_cols=312 Identities=13% Similarity=0.061 Sum_probs=185.8
Q ss_pred CCCCceee-eeeeccchhHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHH
Q 014600 19 QPVGRWSV-LYYGSGHMLNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGS 97 (422)
Q Consensus 19 ~~l~~~~~-~~y~~g~~~~~~~~~~~~~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~ 97 (422)
+|.++++. ....++.+...........+++.+.+|.|.++.++|++.+...+...+..|+.|+++||+||||.+ ..+.
T Consensus 7 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l-~~~~ 85 (402)
T TIGR00897 7 QKIGIPLNLLWGYIGVVVFMTGDGLEQGWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTM-MIGL 85 (402)
T ss_pred HHcCCCchhhHHHHHHHHHHHhhhhHHHhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHH-HHHH
Confidence 34555544 334455566666666777888898877899999999999999999999999999999999999984 4566
Q ss_pred HHHHHHHHHh-hcCccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHH
Q 014600 98 VLVAVSFSSV-FGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVAN 176 (422)
Q Consensus 98 i~~~i~~~~l-f~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~ 176 (422)
...+++..+. +. ... ..+ .+. ..+.+.+.+++.+....+..+...+..+ ++||++.++..+...++|.
T Consensus 86 ~~~~~~~~~~~~~-----~~~-~~~-~~~---l~~~~~i~G~g~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~~g~ 154 (402)
T TIGR00897 86 LLWCVGHAAFIVF-----GLG-HAN-YPL---ILLFYGIRGLGYPLFAYSFLVWVVYNTK-QDNLSSAVGWFWAVYSIGI 154 (402)
T ss_pred HHHHHHHHHHHHH-----hcc-Ccc-HHH---HHHHHHHHHcchHHHHhHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHH
Confidence 6666654322 11 000 111 111 1222345667776665566677777765 6889999999888888775
Q ss_pred -HHHHHHHHHHHhhccCCCCCchHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccC--CC-cchhhhHHHHHHhHHH
Q 014600 177 -LSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLR--GN-SHARISWAYWFKKILY 252 (422)
Q Consensus 177 -~l~~~~~~~l~~~~~~~g~~~~~~~~~~~~~i~~~i~~i~~~i~~~~~~E~~~~~~~~--~~-~~~~~~~~~~~~n~~f 252 (422)
++++.++..+.+..+ .....|+..+.+ . +..++.++..||++++++++ ++ .+.++.++.++|||++
T Consensus 155 ~~~g~~~~~~l~~~~g-----~~~~~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (402)
T TIGR00897 155 GVFGSYYSSYAIPAFG-----EMNTLWSALAFV--L---TGGVIALFSNKDIFTPQHMQTREKFSELGKAATILFTNPNV 224 (402)
T ss_pred HHHHHHHHHhcccccc-----hHHHHHHHHHHH--H---HHHHHHHhccCCCCCcccccCCcchhhHHHHHHHHHcChhH
Confidence 445544333332211 111224433322 1 22223333445432221111 11 1223456778999998
Q ss_pred HHHHHHHHHHHHHHHhhhHHHHHHhhhccCccchhHh---HHHHHH---------------------HHHH---H-----
Q 014600 253 YQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKA---LVPAII---------------------YICS---F----- 300 (422)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~y~~~y~~~~~~l~~~~~~---~iP~~~---------------------~~~~---~----- 300 (422)
+...+.+++......+..+|.|.|+.+ .+++..... ..+.+. ...+ .
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~ 303 (402)
T TIGR00897 225 LLGGMVRIINTIGLFGFAVFLPMFVAE-LGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTL 303 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHH
Confidence 877666666666667778899988865 566554311 000000 0000 0
Q ss_pred HHHHHH-----H---------HHHhh---------hhhhhhcCccccccceehhhHHHHHHHHHHHHHHHHHhHhhCCC
Q 014600 301 IVSILL-----Q---------VTGIS---------MQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSYQSMSPT 356 (422)
Q Consensus 301 ~~~~~~-----~---------v~~~~---------~~~~~~g~r~~g~~~~~s~~~~~~K~~~a~~~~i~g~~l~~~Gy 356 (422)
.+.... + +.+.. ...+ ..+++.|. .+|..++...+++.+++.+.|.+++..|+
T Consensus 304 ~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~-~~~~~~g~--~~g~~~~~~~lg~~~gp~i~g~l~~~~g~ 379 (402)
T TIGR00897 304 ALYYIPQHFGHSFAVALIIAIALGIFLAGYVPLAAVFPT-LAPKHKGA--AMSVLNLSAGLSAFLAPAIAVLFIGFFGA 379 (402)
T ss_pred HHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHh-hCcchhHH--HHHHHHHHHHHHHHHHHHHHHHHHhhcch
Confidence 000000 0 00100 1111 34556777 99999999999999999999999988775
No 35
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.76 E-value=1.8e-15 Score=151.48 Aligned_cols=231 Identities=11% Similarity=0.070 Sum_probs=148.6
Q ss_pred cchhHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCc
Q 014600 32 GHMLNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGC 111 (422)
Q Consensus 32 g~~~~~~~~~~~~~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~ 111 (422)
+.+..........+.++.+..|.|.++.++++......+...+..|+.|+++||+||||. ++.+....+++..+...
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~-l~~~~~~~~~~~~~~~~-- 97 (406)
T PRK15402 21 FEFATYIANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPV-MLAGVAFFILTCLAILL-- 97 (406)
T ss_pred HHHHHHhhhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHH-HHHHHHHHHHHHHHHHH--
Confidence 333333344444555565555569999999999999999999999999999999999887 55676676666554332
Q ss_pred cCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 014600 112 MPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVST 191 (422)
Q Consensus 112 ~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~ 191 (422)
.+ +.+ . ..+...+.+++.+.......+.+.|..+ +++|.+..+.......++..+++.++..+.+
T Consensus 98 -----~~--~~~-~---l~~~~~l~G~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~--- 162 (406)
T PRK15402 98 -----AQ--SIE-Q---FTLLRFLQGIGLCFIGAVGYAAIQESFE-EADAIKITALMANVALLAPLLGPLVGAALIH--- 162 (406)
T ss_pred -----Hc--cHH-H---HHHHHHHHHhHhhhHHHHHHHHHHHHhC-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---
Confidence 11 111 1 1222345666666665566777888875 5678887777666666666666555443332
Q ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccC-CCcchhhhHHHHHHhHHHHHHHHHHHHHHHHHHhhh
Q 014600 192 AKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLR-GNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQ 270 (422)
Q Consensus 192 ~~g~~~~~~~~~~~~~i~~~i~~i~~~i~~~~~~E~~~~~~~~-~~~~~~~~~~~~~~n~~f~~~~~~~~~~~~~~~~~~ 270 (422)
..+|++.+++.+++.++..+..++..||++.+++++ +..+..+.++.++|||+++...+...+.........
T Consensus 163 -------~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (406)
T PRK15402 163 -------VLPWRGMFVLFAALAALSFFGLWRAMPETAGRVGEKLSLKELGRDYKLVLKNRRFVAGALALGLVSLPLLAWI 235 (406)
T ss_pred -------ccCccHHHHHHHHHHHHHHHHHHHhCCCCCccccccccHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHH
Confidence 236888888777777666655555667654322111 112345667888999998776655555444444555
Q ss_pred HHHHHHhhhccCccchh
Q 014600 271 AYLAFYVINDLRMGQSA 287 (422)
Q Consensus 271 ~y~~~y~~~~~~l~~~~ 287 (422)
.+.|.|+.+..++++..
T Consensus 236 ~~~p~~~~~~~g~~~~~ 252 (406)
T PRK15402 236 ALSPVILISGEQLSSYE 252 (406)
T ss_pred HHhHHHHHHHhCCCHHH
Confidence 66788887777776543
No 36
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.75 E-value=1.5e-15 Score=156.31 Aligned_cols=301 Identities=10% Similarity=0.014 Sum_probs=199.0
Q ss_pred eeeeccchhHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHH
Q 014600 27 LYYGSGHMLNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSS 106 (422)
Q Consensus 27 ~~y~~g~~~~~~~~~~~~~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~ 106 (422)
..-.++.+...+...+++.-+|....|.|.+..+.+++...+.+..++..|+.|+++||+||||. ++.+....+++...
T Consensus 9 ~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~-l~~~~~~~~~~~~~ 87 (495)
T PRK14995 9 VIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRL-LMLGGTLFGLASLA 87 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH-HHHHHHHHHHHHHH
Confidence 33445556666777777777888877779999999999999999999999999999999999888 55677777776554
Q ss_pred hhcCccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 014600 107 VFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIV 186 (422)
Q Consensus 107 lf~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l 186 (422)
... ++ +.+ .+++.+.+.+++.+.......+.+.+...+++||++..++......+|..+++.+++.+
T Consensus 88 ~~~-------a~--~~~----~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l 154 (495)
T PRK14995 88 AAF-------SP--TAS----WLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGIL 154 (495)
T ss_pred HHH-------cC--CHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 331 11 122 12233456777777766666666767665678999999999988899988888776655
Q ss_pred HhhccCCCCCchHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccCCCc----------------------chhh---
Q 014600 187 FSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNS----------------------HARI--- 241 (422)
Q Consensus 187 ~~~~~~~g~~~~~~~~~~~~~i~~~i~~i~~~i~~~~~~E~~~~~~~~~~~----------------------~~~~--- 241 (422)
.+ ..+|||.+++...++++..++..+..||++.+++++.+. +...
T Consensus 155 ~~----------~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~ 224 (495)
T PRK14995 155 LE----------HFYWGSVFLINVPIVLVVMGLTARYVPRQAGRRDQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWV 224 (495)
T ss_pred hc----------cCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHhccccCCchHH
Confidence 43 238999999888888777777777777754321111000 0000
Q ss_pred ------------------hH--------HHHHHhHHHHHHHHHHHHHHHHHHhhhHHHHHHhhhccCccchhHh--HHHH
Q 014600 242 ------------------SW--------AYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKA--LVPA 293 (422)
Q Consensus 242 ------------------~~--------~~~~~n~~f~~~~~~~~~~~~~~~~~~~y~~~y~~~~~~l~~~~~~--~iP~ 293 (422)
.. .+++|||.+....+..++......+...|+|.|+++..+.++...+ ..|.
T Consensus 225 ~~~~~~~~~~~l~~f~~~e~~~~~p~~~~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~ 304 (495)
T PRK14995 225 TSLTLLTGALLLGLFIRTQLAASRPMIDMRLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPV 304 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 00 2567788776665556665566667778999999988887765432 1111
Q ss_pred HH---------------------HHHHHHHHH-------HHH-------------HHHhh----------hhhhhhcCcc
Q 014600 294 II---------------------YICSFIVSI-------LLQ-------------VTGIS----------MQNVLVGEDL 322 (422)
Q Consensus 294 ~~---------------------~~~~~~~~~-------~~~-------------v~~~~----------~~~~~~g~r~ 322 (422)
.. ...+.++.. ... +.+.+ .......+++
T Consensus 305 ~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~ 384 (495)
T PRK14995 305 MVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMTDFSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEK 384 (495)
T ss_pred HHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHh
Confidence 00 011111100 000 01111 1122345667
Q ss_pred ccccceehhhHHHHHHHHHHHHHHHHHhHhh
Q 014600 323 SGCAFVCGTLSFLDKMSCGIAVYVLQSYQSM 353 (422)
Q Consensus 323 ~g~~~~~s~~~~~~K~~~a~~~~i~g~~l~~ 353 (422)
.|. ..+..++.+++|.++|.++.|.+++.
T Consensus 385 ~g~--~~~~~~~~~~lG~~~G~ai~g~i~~~ 413 (495)
T PRK14995 385 AAA--AGAIETMAYELGAGLGIAIFGLLLSR 413 (495)
T ss_pred cch--HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777 88999999999999999999999874
No 37
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.75 E-value=4.8e-16 Score=153.70 Aligned_cols=225 Identities=12% Similarity=0.036 Sum_probs=158.8
Q ss_pred HHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCcccc
Q 014600 38 ITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRIL 117 (422)
Q Consensus 38 ~~~~~~~~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~ 117 (422)
.......+.+|.+..+.|.+..++|++.++..+...+..|+.|+++||+||||. +..+.++.+++...+.. .
T Consensus 19 ~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~-~~~~~~~~~~~~~~~~~-------~ 90 (385)
T TIGR00710 19 LGIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPV-LLLGLFIFALSSLGLAL-------S 90 (385)
T ss_pred HHHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHH-HHHHHHHHHHHHHHHHH-------H
Confidence 333444455565555669999999999999999999999999999999999877 55677777766654431 1
Q ss_pred CCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCc
Q 014600 118 STSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHAD 197 (422)
Q Consensus 118 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~~ 197 (422)
+ +.+ .+.+..++.+++.+....+..++..|..+ +++|++..+..+....+|..+++.+++.+.+
T Consensus 91 ~--~~~----~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~--------- 154 (385)
T TIGR00710 91 N--NIE----TLLVLRFVQAFGASAGSVISQALVRDIYP-GEELSRIYSILMPVLALAPAVAPLLGGYILV--------- 154 (385)
T ss_pred c--cHH----HHHHHHHHHHcchhHHHHHHHHHHHHhcC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------
Confidence 1 112 12233456778888888889999999986 6789999999988888888888776655443
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccCCCcchhhhHHHHHHhHHHHHHHHHHHHHHHHHHhhhHHHHHHh
Q 014600 198 LENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYV 277 (422)
Q Consensus 198 ~~~~~~~~~~i~~~i~~i~~~i~~~~~~E~~~~~~~~~~~~~~~~~~~~~~n~~f~~~~~~~~~~~~~~~~~~~y~~~y~ 277 (422)
..+|++.+.+.+++.++..++.++..||++.+++++++.+..+.+++.+|||+++...+.+.+..........+.|.|+
T Consensus 155 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (385)
T TIGR00710 155 -WLSWHAIFAFLSLAGILLSALIFFILPETLPYEARIQISTYFETFLLLLKSKMFWGYALIYGASFGGFFAFFSGAPFVY 233 (385)
T ss_pred -HcCHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcccCCHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHcChHHH
Confidence 2378888877777777666666666777543322222223345667889999988766666555555566677888888
Q ss_pred hhccCccchh
Q 014600 278 INDLRMGQSA 287 (422)
Q Consensus 278 ~~~~~l~~~~ 287 (422)
.+..+.++..
T Consensus 234 ~~~~g~~~~~ 243 (385)
T TIGR00710 234 IDIMGVSPSV 243 (385)
T ss_pred HHHcCCCHHH
Confidence 8777766543
No 38
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.74 E-value=1.9e-15 Score=150.79 Aligned_cols=304 Identities=12% Similarity=0.021 Sum_probs=178.4
Q ss_pred eeeeeeccchhHHHHHHHHHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHH
Q 014600 25 SVLYYGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVS 103 (422)
Q Consensus 25 ~~~~y~~g~~~~~~~~~~~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~ 103 (422)
+........+...+...+...+++.+..+. |.|+.++|++.++..+..++.+|+.|+++||+||||. ++.+....+++
T Consensus 16 ~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~-l~~~~~~~~~~ 94 (399)
T PRK05122 16 RIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKA-VVFGLCGCALS 94 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcch-HHHHHHHHHHH
Confidence 345566666777777788888999888776 9999999999999999999999999999999999998 45566665554
Q ss_pred HHHhhcCccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHH
Q 014600 104 FSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIA 183 (422)
Q Consensus 104 ~~~lf~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~ 183 (422)
...+.. .. +.++. ..+.+..+++.+.+.+++.+.......++..+..+ ++||++..++......+|.++++.++
T Consensus 95 ~~~~~~--~~--~~~~~-~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~l~ 168 (399)
T PRK05122 95 GLLYLL--AG--LLAAW-PVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVG-ALHTGRVISWNGIATYGALAIGAPLG 168 (399)
T ss_pred HHHHHH--hh--hhhcc-chhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcC-hhhhccchhhhhhhhhHHHHHHHHHH
Confidence 333221 00 01110 11111223334457888888888888888888875 68899999988877788877777666
Q ss_pred HHHHhhccCCCCCchHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccCCCcchhhhHHHHHHhHHHHHHHHHHHHHH
Q 014600 184 FIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKKILYYQVALVYMLTR 263 (422)
Q Consensus 184 ~~l~~~~~~~g~~~~~~~~~~~~~i~~~i~~i~~~i~~~~~~E~~~~~~~~~~~~~~~~~~~~~~n~~f~~~~~~~~~~~ 263 (422)
..+... .+|++.+.+..++.++..+.. ...+|++. +++++ .++++.+|+ .+.......+..
T Consensus 169 ~~l~~~----------~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~----~~~~~~~~~--~~~~~~~~~~~~ 229 (399)
T PRK05122 169 VLLYHW----------GGLAGLGLLIMLLALLGLLLA-RPRPAVPP--VKGER----LPFRRVLGR--VWPYGMGLALAS 229 (399)
T ss_pred HHHHHc----------ccHHHHHHHHHHHHHHHHHHH-hcCCCCCC--CCccc----hhHHHHHHH--HHHHHHHHHHHH
Confidence 554432 367777665555444332222 21222111 11111 223333332 122222222333
Q ss_pred HHHHhhhHHHHHHhhhccCccchhH-------hHH---HHHH-----------HHH-------HHHHHHHHH--------
Q 014600 264 LVVNVSQAYLAFYVINDLRMGQSAK-------ALV---PAII-----------YIC-------SFIVSILLQ-------- 307 (422)
Q Consensus 264 ~~~~~~~~y~~~y~~~~~~l~~~~~-------~~i---P~~~-----------~~~-------~~~~~~~~~-------- 307 (422)
.+......+.+.|..+. +...... +.+ +... ... +.......+
T Consensus 230 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (399)
T PRK05122 230 IGFGTIATFITLYYAAR-GWDGAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIG 308 (399)
T ss_pred HHHHHHHHHHHHHHHHc-ccccchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 44445566777776643 3322110 000 0000 000 000000000
Q ss_pred --HHH-------hhh---hhhhhcCccccccceehhhHHHHHHHHHHHHHHHHHhHhhCCCc
Q 014600 308 --VTG-------ISM---QNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSYQSMSPTV 357 (422)
Q Consensus 308 --v~~-------~~~---~~~~~g~r~~g~~~~~s~~~~~~K~~~a~~~~i~g~~l~~~Gy~ 357 (422)
+.+ ..+ ..+...+++.|. .+|.++...++|.++++.+.|++.+..||+
T Consensus 309 ~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~--~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~ 368 (399)
T PRK05122 309 AALTGFGFSLVFPALGVEAVKRVPPQNRGA--ALGAYSVFLDLSLGITGPLAGLVASWFGYP 368 (399)
T ss_pred HHHHHHhHHHHHHHHHHHHHHhCCHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHcCHH
Confidence 001 111 123456677788 999999999999999999999998877653
No 39
>PRK10054 putative transporter; Provisional
Probab=99.74 E-value=1.8e-15 Score=151.22 Aligned_cols=224 Identities=11% Similarity=0.051 Sum_probs=148.4
Q ss_pred eeeeccchhHHHHHHHHHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHH
Q 014600 27 LYYGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFS 105 (422)
Q Consensus 27 ~~y~~g~~~~~~~~~~~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~ 105 (422)
.......+.....+....++++.|+++. |+++.++|++.++..+...+..|+.|+++||+||||. ++.+.+..+++..
T Consensus 10 ~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~-~~~~~~~~~~~~~ 88 (395)
T PRK10054 10 SALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRY-MLLAITAFASGFI 88 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchh-HHHHHHHHHHHHH
Confidence 4444566777777778888999999886 9999999999999999999999999999999999877 5566666666654
Q ss_pred HhhcCccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHH
Q 014600 106 SVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFI 185 (422)
Q Consensus 106 ~lf~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~ 185 (422)
++.. .+ +.+ . .++...+.+.+.+.......++.+|..+ +++|++..++.+...++|..+++.+++.
T Consensus 89 ~~~~-------~~--~~~-~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~lg~~igp~l~~~ 154 (395)
T PRK10054 89 AIPL-------VN--NVT-L---VVLFFALINCAYSVFSTVLKAWFADNLS-STSKTKIFSLNYTMLNIGWTVGPPLGTL 154 (395)
T ss_pred HHHH-------Hh--HHH-H---HHHHHHHHHHHHHHHHHHHHHHHHHhcC-HhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3321 11 111 1 1111223455555555667788888875 6789999999888889988888776654
Q ss_pred HHhhccCCCCCchHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccCCCcchhhhHHHHHHhHHHHHHHHHHHHHHHH
Q 014600 186 VFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKKILYYQVALVYMLTRLV 265 (422)
Q Consensus 186 l~~~~~~~g~~~~~~~~~~~~~i~~~i~~i~~~i~~~~~~E~~~~~~~~~~~~~~~~~~~~~~n~~f~~~~~~~~~~~~~ 265 (422)
+.. .+|+..+.+.+++.++..++..+.++|++.+++ +++++ ....++.+|||+++...+..++....
T Consensus 155 l~~-----------~g~~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~ 221 (395)
T PRK10054 155 LVM-----------QSINLPFWLAAICSAFPLVFIQIWVQRSEKAIA-TETGS-VWSPSVLLQDKALLWFTCSGFLASFV 221 (395)
T ss_pred HHH-----------hccCcHHHHHHHHHHHHHHHHHHHHhccccccc-cchhh-hhhhhhhccCceehHHHHHHHHHHHH
Confidence 432 256666666666665554444454554432221 11111 12236788999987776666665555
Q ss_pred HHhhhHHHHHHhh
Q 014600 266 VNVSQAYLAFYVI 278 (422)
Q Consensus 266 ~~~~~~y~~~y~~ 278 (422)
......+.+.|..
T Consensus 222 ~~~~~~~~~~~~~ 234 (395)
T PRK10054 222 SGAFASCISQYVM 234 (395)
T ss_pred HHHhhhhHHHHHH
Confidence 4444445566654
No 40
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.74 E-value=3.2e-16 Score=151.32 Aligned_cols=279 Identities=15% Similarity=0.085 Sum_probs=197.9
Q ss_pred CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCccchhhhHHHHHHHH
Q 014600 55 GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAA 134 (422)
Q Consensus 55 gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~~~~~~~~~~~~~ 134 (422)
|+|.++.|.+.+...+...++.-++|.++||.+.|+- +-.|.++.++..+++= +++ +.. .+.++..
T Consensus 60 ~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~f-m~~gLilsai~nil~G-------fs~--s~~----~~~~l~~ 125 (448)
T COG2271 60 GLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYF-MAFGLILSAIVNILFG-------FSP--SLF----LFAVLWV 125 (448)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcee-ehHHHHHHHHHHHHHh-------hhh--HHH----HHHHHHH
Confidence 6999999999999999999999999999999998776 7788888888775532 121 222 2222233
Q ss_pred HHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchHHHHHHHHHHHHHHHH
Q 014600 135 IFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGC 214 (422)
Q Consensus 135 l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~~~~~~~~~~~~i~~~i~~ 214 (422)
+-+...+.-..|....+..+.+ ++||++.-++.+...++|+.+.+.+... ..+. ...+|+..+++-+++++
T Consensus 126 lng~fQg~Gwpp~~~~i~~Wfs-r~eRG~~~siWn~shNiGGal~~~~~~l--a~~~------~~~~w~~~f~~pgiiai 196 (448)
T COG2271 126 LNGWFQGMGWPPCARTITHWFS-RKERGTWWSIWNTSHNIGGALAPLVALL--AFFA------FHGGWRAAFYFPGIIAI 196 (448)
T ss_pred HHHHHhcCCCcHHHHHHHHHcC-ccccCceEEEehhhhhcccchHHHHHHH--HHHH------hccchhHHHHHHHHHHH
Confidence 5666777777888899999987 6899999999999999998776654421 2221 12378999999999999
Q ss_pred HHHhhhhccccCccccc----------c--c---CCCcc----hhh-hHHHHHHhHHHHHHHHHHHHHHHHHHhhhHHHH
Q 014600 215 CFVGIFLSRTEEPRLKM----------G--L---RGNSH----ARI-SWAYWFKKILYYQVALVYMLTRLVVNVSQAYLA 274 (422)
Q Consensus 215 i~~~i~~~~~~E~~~~~----------~--~---~~~~~----~~~-~~~~~~~n~~f~~~~~~~~~~~~~~~~~~~y~~ 274 (422)
+..+++++..||+|++. + | +++++ .++ -++.++|||..|.+.+.+++......++..+-|
T Consensus 197 ival~~~~~~rd~Pqs~GLP~ie~~~~d~~e~~~~~~~~~~ls~~~i~~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p 276 (448)
T COG2271 197 IVALILLFLLRDRPQSEGLPPIEEYRGDPLEIYEEEKENEGLTAWQIFVKYVLKNKLIWLLALANVFVYVVRYGINDWGP 276 (448)
T ss_pred HHHHHHHHHhCCCccccCCCCHHHhhcCchhhhhhhccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 99999999999987431 0 0 11111 122 356789999999999999999999999999999
Q ss_pred HHhhhccCccchhH---------hHHHHHH--------------------HHHHHHHHHHHH------------------
Q 014600 275 FYVINDLRMGQSAK---------ALVPAII--------------------YICSFIVSILLQ------------------ 307 (422)
Q Consensus 275 ~y~~~~~~l~~~~~---------~~iP~~~--------------------~~~~~~~~~~~~------------------ 307 (422)
.|+.|.++++.... +.+|..+ +.++..+++..-
T Consensus 277 ~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~i 356 (448)
T COG2271 277 LYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVLYWLAPNGSYLLDAILLFII 356 (448)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHH
Confidence 99999988875432 2233211 111111111100
Q ss_pred ---HHHhhh-----hhhhhcCccccccceehhhHHHHHH-HHHHHHHHHHHhHhhCCCcc
Q 014600 308 ---VTGISM-----QNVLVGEDLSGCAFVCGTLSFLDKM-SCGIAVYVLQSYQSMSPTVL 358 (422)
Q Consensus 308 ---v~~~~~-----~~~~~g~r~~g~~~~~s~~~~~~K~-~~a~~~~i~g~~l~~~Gy~~ 358 (422)
+.|+.| ..+..-++..|+ ..|...++.=+ |.+++....|++.+..|.+.
T Consensus 357 Gf~IyGPqmLiGl~a~e~~pK~AaGt--A~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g 414 (448)
T COG2271 357 GFLIYGPQMLIGLAAAEFVPKKAAGT--ATGFVGLFAYLIGAALAGLPLGYIADTWGWDG 414 (448)
T ss_pred HHHHhhHHHHHHHHHhccccHhhccc--hhchhhhHHHHhhHHhcCCcceeeEecCCCcc
Confidence 112333 234556778888 88988888888 88888888888877767654
No 41
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.74 E-value=3.6e-16 Score=152.34 Aligned_cols=226 Identities=17% Similarity=0.152 Sum_probs=154.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCcc
Q 014600 34 MLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCM 112 (422)
Q Consensus 34 ~~~~~~~~~~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~ 112 (422)
+...+........++.++.+. |.++.++|++.++..+...+..|+.|+++||+||||. ++.+.+..+++...+..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~-l~~~~~~~~~~~~~~~~--- 81 (352)
T PF07690_consen 6 FLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRV-LIIGLLLFALGSLLLAF--- 81 (352)
T ss_dssp HHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHH-HHHHHHHHHHHHHHHHH---
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeee-EeehhhhhhhHHHHhhh---
Confidence 444555556666666466665 9999999999999999999999999999999999985 77788888887333221
Q ss_pred CccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 014600 113 PCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTA 192 (422)
Q Consensus 113 p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~ 192 (422)
++ +.+ .+++..++.+++.+.......+++.|+.++ +||++..+.......+|.++++.++..+.+
T Consensus 82 ----~~--~~~----~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~---- 146 (352)
T PF07690_consen 82 ----AS--NFW----LLLIARFLLGIGSGFFSPASNALIADWFPP-EERGRAFGILSAGFSLGSILGPLLGGFLIS---- 146 (352)
T ss_dssp ----HC--CHH----HHHHHHHHHHHHHHHHHHHHHHHHHHCCCT-CCHHHHHHHHHHHHHHHHHHHHHHHHHCCC----
T ss_pred ----hh--hHH----HHhhhccccccccccccccccccccccchh-hhhhhccccccchhhhhhhcccchhhhhhh----
Confidence 11 111 233334578888888999999999999874 899999999999999999888766654432
Q ss_pred CCCCchHHHHHHHHHHHHHHHHHHHhhhhccccCcccccc-c-CCCc------chhhhHHHHHHhHHHHHHHHHHHHHHH
Q 014600 193 KTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMG-L-RGNS------HARISWAYWFKKILYYQVALVYMLTRL 264 (422)
Q Consensus 193 ~g~~~~~~~~~~~~~i~~~i~~i~~~i~~~~~~E~~~~~~-~-~~~~------~~~~~~~~~~~n~~f~~~~~~~~~~~~ 264 (422)
..+|++.+++.+++.++..++.....+|++.+++ + +++. +.++.++.++++|.++......++...
T Consensus 147 ------~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (352)
T PF07690_consen 147 ------YFGWRWAFLISAILSLIAAILFILFLPEPPPPRERESPKESESKKPKPLKPGFKSLFKNPVLWILLIAFFLFFF 220 (352)
T ss_dssp ------HCHHCCHHHHHHHHHHHHHHHHHCCC---STTTT--SSTTTT--HHHCCCH-CTHHHHHHCCHHHHHHHHHHHH
T ss_pred ------ccccccccccccchhhhhhhhHhhhhhhcccccccccccccccccccccccccccccccchhhhhhhhhhHHHH
Confidence 3478888888888777776653344444332211 1 1111 112236778888876544444444455
Q ss_pred HHHhhhHHHHHHhhhccCcc
Q 014600 265 VVNVSQAYLAFYVINDLRMG 284 (422)
Q Consensus 265 ~~~~~~~y~~~y~~~~~~l~ 284 (422)
.......+.|.|..+..+.+
T Consensus 221 ~~~~~~~~~~~~l~~~~~~~ 240 (352)
T PF07690_consen 221 VFSGFSFFLPLYLQEVLGFS 240 (352)
T ss_dssp HHHHHHHHHHHHCCHHHHCC
T ss_pred HHHHhhcccchhhhhccCCC
Confidence 66678889999977777777
No 42
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.74 E-value=2.3e-15 Score=152.43 Aligned_cols=220 Identities=13% Similarity=0.072 Sum_probs=145.4
Q ss_pred HHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCccchhhh
Q 014600 47 LLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVET 126 (422)
Q Consensus 47 l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~~~~~ 126 (422)
..+++++.|+++.+.|++.++..+...+..|+.|+++||+||||. +..+.+..+++...+.. .|. . ..+..
T Consensus 49 ~~p~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~-~~~~~~~~~~~~~~~~~--~~~--~-~~~~~--- 119 (438)
T TIGR00712 49 AMPYLVEQGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVF-LPAGLILSAAVMLLMGF--VPW--A-TSSIA--- 119 (438)
T ss_pred hhHHHHHcCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCcee-hHHHHHHHHHHHHHHhc--ccc--c-cchHH---
Confidence 445666679999999999999999999999999999999999887 55677777776554321 120 0 01111
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchHHHHHHHH
Q 014600 127 ISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIA 206 (422)
Q Consensus 127 ~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~~~~~~~~~~~ 206 (422)
...+...+.+++.+....+..+.+.|+.+ ++||++..++.+....+|+.+++.+....+. ...+|++.+
T Consensus 120 -~l~~~~~l~g~~~g~~~~~~~~~i~~~~~-~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~---------~~~~w~~~f 188 (438)
T TIGR00712 120 -IMFVLLFLNGWFQGMGWPPCGRTMVHWWS-QSERGTIVSIWNCAHNIGGGIPPLLVLLGMA---------WFNDWHAAL 188 (438)
T ss_pred -HHHHHHHHHHHHhhcchHHHHHHHHHhcC-cccchhHHHHHHHHHHhHhHHHHHHHHHHHH---------HhhhhHHHH
Confidence 11122235666666666677788888875 6789999999888888887776544332222 124799988
Q ss_pred HHHHHHHHHHHhhhhccccCccccc---c-c---C-------CCc----chhhh-HHHHHHhHHHHHHHHHHHHHHHHHH
Q 014600 207 YSSIFIGCCFVGIFLSRTEEPRLKM---G-L---R-------GNS----HARIS-WAYWFKKILYYQVALVYMLTRLVVN 267 (422)
Q Consensus 207 ~i~~~i~~i~~~i~~~~~~E~~~~~---~-~---~-------~~~----~~~~~-~~~~~~n~~f~~~~~~~~~~~~~~~ 267 (422)
++.+++.++..++.++.+||++.++ + + + ++. +.++. .+.++|||.++...+..++......
T Consensus 189 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (438)
T TIGR00712 189 YFPAICAIIVALFAFAMMRDTPQSCGLPPIEEYRNDYPDDYNEKAEQELTAKEIFMQYVLPNKLLWYIAIANVFVYLLRY 268 (438)
T ss_pred HHHHHHHHHHHHHHHHhccCCHHhcCCCCchhcccccccccccccccccchHHHHHHHHccCchHHHHHHHHHHHHHHHH
Confidence 8887777776666666777754311 0 0 0 000 01111 1246788888776655555555566
Q ss_pred hhhHHHHHHhhhccCccch
Q 014600 268 VSQAYLAFYVINDLRMGQS 286 (422)
Q Consensus 268 ~~~~y~~~y~~~~~~l~~~ 286 (422)
+...|.|.|+++..++++.
T Consensus 269 ~~~~~~p~~l~~~~g~s~~ 287 (438)
T TIGR00712 269 GVLDWSPTYLKEVKHFALD 287 (438)
T ss_pred HHHHhHHHHHHHccCCChh
Confidence 7788999999987676553
No 43
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.74 E-value=3.4e-16 Score=153.95 Aligned_cols=241 Identities=10% Similarity=0.036 Sum_probs=155.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCcc
Q 014600 34 MLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCM 112 (422)
Q Consensus 34 ~~~~~~~~~~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~ 112 (422)
+.....+....++++.++++. |+|+.++|++..+..+.+++.+|+.|+++||+||||. ++.+.+..+++..++..
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~-~~~~~~~~~i~~~~~~~--- 86 (366)
T TIGR00886 11 FLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYT-TTLSLLLLAIPCLWAGL--- 86 (366)
T ss_pred HHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHH-HHHHHHHHHHHHHHHHH---
Confidence 344455556667777667666 9999999999999999999999999999999999988 55677777777654331
Q ss_pred CccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 014600 113 PCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTA 192 (422)
Q Consensus 113 p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~ 192 (422)
.+. +.+ .+.+.+++.+++.+. ..+..+++.++.+ ++||++..++......+|..+++.+.+++...+..
T Consensus 87 ----~~~-~~~----~~~~~~~~~g~~~~~-~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~ 155 (366)
T TIGR00886 87 ----AVQ-SYS----VLLLLRLFIGIAGGS-FASCMPWISFFFP-KKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIF 155 (366)
T ss_pred ----Hhh-hHH----HHHHHHHHHHHhchh-hHhHHHHHHHhcC-HhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHh
Confidence 110 111 122223455655443 3556788888875 67899999998888888888887777666653211
Q ss_pred CCCCchHHHHHHHH-HHHHHHHHHHHhhhhccccCcccccccCCCcc-----------hhhhHHHHHHhHHHHHHHHHHH
Q 014600 193 KTHADLENQYRWIA-YSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSH-----------ARISWAYWFKKILYYQVALVYM 260 (422)
Q Consensus 193 ~g~~~~~~~~~~~~-~i~~~i~~i~~~i~~~~~~E~~~~~~~~~~~~-----------~~~~~~~~~~n~~f~~~~~~~~ 260 (422)
....+...+|++.+ ...+++..+..++.+...+|++.+++++++.+ ..+..++.+++|+++...+.++
T Consensus 156 ~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (366)
T TIGR00886 156 GAGLPAHLAWGWAFVIVPAGILLLPALLIFFVGADTPPGKPATGKLSFKGARWSVGTGALGDQLKVFRDRHTWILALLYS 235 (366)
T ss_pred cccccccccccchhHHHHHHHHHHHHHHHHHhcccCCcccccchhcccccccccccchhHHHHHHHHhccchhhHHHHHH
Confidence 00011234788877 44344444444444555555432211111111 0114567888888877666666
Q ss_pred HHHHHHHhhhHHHHHHhhhccCccchhHh
Q 014600 261 LTRLVVNVSQAYLAFYVINDLRMGQSAKA 289 (422)
Q Consensus 261 ~~~~~~~~~~~y~~~y~~~~~~l~~~~~~ 289 (422)
+..........+.+.|..+..+.+.....
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 264 (366)
T TIGR00886 236 VTFGSFLGVSSIFAMFFKDQFGLSKVTAG 264 (366)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCcHHHHH
Confidence 65555667788899999888777665443
No 44
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.74 E-value=7.2e-16 Score=151.44 Aligned_cols=231 Identities=13% Similarity=0.066 Sum_probs=159.2
Q ss_pred HHHHHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhccc-----CCchhHHHHHHHHHHHHHHHhhcCccCccc
Q 014600 42 CWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRF-----GHFKIWHGAGSVLVAVSFSSVFGGCMPCRI 116 (422)
Q Consensus 42 ~~~~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~-----Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~ 116 (422)
....-++.+.+|.|+|.+++|...++.-.+ ++ .|+.|.++||+ ||||+|++.+.++.++.+..+.. .+
T Consensus 6 ~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~-~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~--~~--- 78 (356)
T TIGR00901 6 LVGNTLPYWLRSKNVSLKTIGFFSLVGLPY-SL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSF--LV--- 78 (356)
T ss_pred hHHhHHHHHHHHcCCCHHHHHHHHHHHHHH-HH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHc--CC---
Confidence 344456777777799999999997664333 44 99999999996 99999988888888877554432 11
Q ss_pred cCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCC
Q 014600 117 LSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHA 196 (422)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~ 196 (422)
+..+.++ .....++.+.+.+...+++.++++|+++ +|||++.++++..+..+|.++++.++..+....+.. .
T Consensus 79 -~~~~l~~----l~~~~~~~~~~~~~~~~~~~a~~~~~~~-~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~--~ 150 (356)
T TIGR00901 79 -PSTDLPL----LAGLAFLIAFFSATQDIALDAWRLEILS-DEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFAN--T 150 (356)
T ss_pred -cchhHHH----HHHHHHHHHHHHHHHHHHHHHHHHHhCC-HhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccc--c
Confidence 1112211 1122235667778889999999999985 689999999999999999998888776665543210 0
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccC--CCcchhhhHHHHHHhHH---HHHHHHHHHHHHHHHHhhhH
Q 014600 197 DLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLR--GNSHARISWAYWFKKIL---YYQVALVYMLTRLVVNVSQA 271 (422)
Q Consensus 197 ~~~~~~~~~~~i~~~i~~i~~~i~~~~~~E~~~~~~~~--~~~~~~~~~~~~~~n~~---f~~~~~~~~~~~~~~~~~~~ 271 (422)
..+.+|+..+.+.++..++..+++++..||++.+++++ ++.+.++.+++++|||. ++...+..++.+.+......
T Consensus 151 ~~~~~wr~~f~i~ai~~l~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (356)
T TIGR00901 151 GLITLWGYIFFWTALLILPGLLVTLFLAKEPQEDASVPKPLTQAVLKPIREFFQRKNMIQALLLLLLIVLYKLGDSAATV 230 (356)
T ss_pred ccccccHHHHHHHHHHHHHHHHHHHHhccCCCcccccchhHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHH
Confidence 11345999998888877776666666677754321111 11223456788888885 55555566666677777788
Q ss_pred HHHHHhhhccCccchhH
Q 014600 272 YLAFYVINDLRMGQSAK 288 (422)
Q Consensus 272 y~~~y~~~~~~l~~~~~ 288 (422)
+++.|..+ .++++...
T Consensus 231 ~~~~~l~~-~g~~~~~~ 246 (356)
T TIGR00901 231 LTTLFLLD-MGFSKEEI 246 (356)
T ss_pred HHHHHHHH-cCCCHHHH
Confidence 99999887 67766543
No 45
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.73 E-value=1.3e-14 Score=145.80 Aligned_cols=220 Identities=12% Similarity=0.042 Sum_probs=149.0
Q ss_pred HHHHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCccc
Q 014600 43 WFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTL 122 (422)
Q Consensus 43 ~~~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~ 122 (422)
..+-++..-++.|.+....++..++..+..++..|+.|.++||+||||. ++.+....+++..+... .+ +.
T Consensus 35 ~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~-l~~~~~~~~~~~~~~~~-------a~--~~ 104 (413)
T PRK15403 35 IQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPV-LITGALIFTLACAATLF-------TT--SM 104 (413)
T ss_pred hccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHH-HHHHHHHHHHHHHHHHH-------cC--CH
Confidence 3333444333449999999999999999999999999999999999887 55666666666544321 11 12
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchHHHH
Q 014600 123 KVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQY 202 (422)
Q Consensus 123 ~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~~~~~~~ 202 (422)
. .+++.+++.+++.+.......+...|..+ ++||.+..++-.....+|..+++.++..+.+ ..+|
T Consensus 105 ~----~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~----------~~gw 169 (413)
T PRK15403 105 T----QFLIARFIQGTSICFIATVGYVTVQEAFG-QTKGIKLMAIITSIVLVAPIIGPLSGAALMH----------FVHW 169 (413)
T ss_pred H----HHHHHHHHHHHHHHHHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------hcCH
Confidence 1 12233345666655544445567778765 5788898888777778888777766544432 2479
Q ss_pred HHHHHHHHHHHHHHHhhhhccccCcccccccC-CCcchhhhHHHHHHhHHHHHHHHHHHHHHHHHHhhhHHHHHHhhhcc
Q 014600 203 RWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLR-GNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDL 281 (422)
Q Consensus 203 ~~~~~i~~~i~~i~~~i~~~~~~E~~~~~~~~-~~~~~~~~~~~~~~n~~f~~~~~~~~~~~~~~~~~~~y~~~y~~~~~ 281 (422)
++.+++.++++++..+..++..||++.+++++ ++.+..+.++.++|||+++...+.+.+..........+.|.|+++..
T Consensus 170 ~~~f~~~~~~~~i~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~ 249 (413)
T PRK15403 170 KVLFAIIAVMGLIAFVGLLLAMPETVKRGAVPFSAKSVLRDFRNVFRNRLFLTGAATLSLSYIPMMSWVAVSPVILIDAG 249 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCccccCCCCChHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhc
Confidence 99998888877776665566677754322111 11233456788999999988777666666666666777899998887
Q ss_pred Cccchh
Q 014600 282 RMGQSA 287 (422)
Q Consensus 282 ~l~~~~ 287 (422)
+.++..
T Consensus 250 g~s~~~ 255 (413)
T PRK15403 250 GMTTSQ 255 (413)
T ss_pred CCCHHH
Confidence 776553
No 46
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.73 E-value=1.2e-14 Score=144.86 Aligned_cols=300 Identities=12% Similarity=0.014 Sum_probs=188.3
Q ss_pred chhHHHHHHHHHHHHHHHHHHhCCChhHHHHH--HHHHHHHhhhhhhhhhh-hhcccCCchhHHHHHHHHHHHHHHHhhc
Q 014600 33 HMLNDITAACWFTYLLLFLTDIGLSPRGAAAV--MLSGQIADGFATIFIGE-LIDRFGHFKIWHGAGSVLVAVSFSSVFG 109 (422)
Q Consensus 33 ~~~~~~~~~~~~~~l~~f~t~~gls~~~~g~i--~~i~~l~~ai~~p~~G~-lsDr~Grrrp~ll~g~i~~~i~~~~lf~ 109 (422)
-+.+.+..++..+++|.|++|.|.|+.++|.+ ..+..+...+..|+++. .+||+||||+|++......++....+..
T Consensus 10 y~~~g~~~~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~~~~~~~ 89 (390)
T TIGR02718 10 YLSQGIPIGLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSACLASLAL 89 (390)
T ss_pred HHHHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHHHHHHHc
Confidence 35677788888899999999999999999997 46668888889999955 7999999999976654444432222211
Q ss_pred CccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 014600 110 GCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSV 189 (422)
Q Consensus 110 ~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~ 189 (422)
..| . .....+ .+....+.....+..++...++..|..+ +++|+..++.+..+..+|.++++.....+.+
T Consensus 90 -~~~---~-~~~~~~----~~~~~~~~~~~~a~~d~~~d~~~~~~~~-~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~- 158 (390)
T TIGR02718 90 -VGP---D-VAGAGW----AVGLLACASLASATQDIATDGMAAEHFN-GRTLAKGNAVQIAGVMIGFFGGGAGTLVLFG- 158 (390)
T ss_pred -CCc---c-hhhHHH----HHHHHHHHHHHHHHHHHHHHHHHHHhCC-HhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 011 1 111111 1111223555666777777888777654 5677888888888778888887755544443
Q ss_pred ccCCCCCchHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccCCCcchhhhHHHHHHhHHHHHHHHHHHHHHHHHHhh
Q 014600 190 STAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKKILYYQVALVYMLTRLVVNVS 269 (422)
Q Consensus 190 ~~~~g~~~~~~~~~~~~~i~~~i~~i~~~i~~~~~~E~~~~~~~~~~~~~~~~~~~~~~n~~f~~~~~~~~~~~~~~~~~ 269 (422)
..+|+..+++.+++.++..+..++..+|++ +++++ +.+..+++++.+|||.++..+...++........
T Consensus 159 ---------~~gw~~~f~~~a~l~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~ 227 (390)
T TIGR02718 159 ---------KFGQRPAFLLVACVPLASLVCVLWLKDRAV-ASPEA-PLARRASLFRFFRRPLAWSLLALALLSAMTAVSG 227 (390)
T ss_pred ---------HhCHHHHHHHHHHHHHHHHHHHHHcCCCCc-Ccccc-chhhHHHHHHHHcCcCHHHHHHHHHHHHHHHHHH
Confidence 347888888887776665555444433322 21111 1122345678899998877666666666666677
Q ss_pred hHHHHHHhhhccCccchhHhHH---------HH--HH-------------HHHHHHHH-------HHHH-----------
Q 014600 270 QAYLAFYVINDLRMGQSAKALV---------PA--II-------------YICSFIVS-------ILLQ----------- 307 (422)
Q Consensus 270 ~~y~~~y~~~~~~l~~~~~~~i---------P~--~~-------------~~~~~~~~-------~~~~----------- 307 (422)
..+.+.|..+ .+++....+.+ .. .. ...+.+.. ....
T Consensus 228 ~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (390)
T TIGR02718 228 FGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVA 306 (390)
T ss_pred HHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHH
Confidence 7788888877 47776543210 00 00 00011000 0000
Q ss_pred ----HH-----Hhh------hhhhhhcC-ccccccceehhhHHHHHHHHHHHHHHHHHhHhhCCCc
Q 014600 308 ----VT-----GIS------MQNVLVGE-DLSGCAFVCGTLSFLDKMSCGIAVYVLQSYQSMSPTV 357 (422)
Q Consensus 308 ----v~-----~~~------~~~~~~g~-r~~g~~~~~s~~~~~~K~~~a~~~~i~g~~l~~~Gy~ 357 (422)
+. +.. ......++ +.+|. .++..+.+..+|..+++.+.|.+.+..||+
T Consensus 307 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~--~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~ 370 (390)
T TIGR02718 307 WSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGT--DVTAVQSTRDLGELIASSIAGYLTDRFGYA 370 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHccH
Confidence 00 100 11223344 67788 899999999999999999999999988874
No 47
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.73 E-value=9.8e-15 Score=145.94 Aligned_cols=290 Identities=12% Similarity=0.078 Sum_probs=174.8
Q ss_pred HHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccc
Q 014600 37 DITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRI 116 (422)
Q Consensus 37 ~~~~~~~~~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~ 116 (422)
...........+.+..|.|.++.++|++.+...+...+..|+.|+++||+||||.++ .+.....++..++..
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~-~~~~~~~~~~~~~~~------- 99 (406)
T PRK11551 28 GLDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILI-VSVALFGLFSLATAQ------- 99 (406)
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHH-HHHHHHHHHHHHHHH-------
Confidence 333344444556565556999999999999999999999999999999999999854 566666665443321
Q ss_pred cCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCC
Q 014600 117 LSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHA 196 (422)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~ 196 (422)
.+ +.+ ..++...+.+++.+....+..++..|+.+ +++|++..++.+.+..+|..+++.++..+.
T Consensus 100 ~~--~~~----~~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~--------- 163 (406)
T PRK11551 100 AW--DFP----SLLVARLLTGVGLGGALPNLIALTSEAVG-PRLRGTAVSLMYCGVPFGGALASVIGVLAA--------- 163 (406)
T ss_pred hc--cHH----HHHHHHHHHHhhHHHHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHc---------
Confidence 11 122 12223346778888777888899999875 678999999988888888877765543221
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccCC-CcchhhhHHHHHHhH---HHHHHHHHHHHHHHHHHhhhHH
Q 014600 197 DLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRG-NSHARISWAYWFKKI---LYYQVALVYMLTRLVVNVSQAY 272 (422)
Q Consensus 197 ~~~~~~~~~~~i~~~i~~i~~~i~~~~~~E~~~~~~~~~-~~~~~~~~~~~~~n~---~f~~~~~~~~~~~~~~~~~~~y 272 (422)
...+|++.+.+.+++.++...+..+..||++.++++++ +.+.++..+..+|++ +.+.+...+++..........|
T Consensus 164 -~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (406)
T PRK11551 164 -GDAAWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAGKQRAPVLRALFGEGRATATLLLWISYFFTLIVLYFLLNW 242 (406)
T ss_pred -cccCHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCcchhhhhhHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 12368888777666555555555566787653221111 111112223333332 2233333334434445566678
Q ss_pred HHHHhhhccCccchhHh---------HHHHHH--------------HHHHHH---HHHHH-H-------------HHH--
Q 014600 273 LAFYVINDLRMGQSAKA---------LVPAII--------------YICSFI---VSILL-Q-------------VTG-- 310 (422)
Q Consensus 273 ~~~y~~~~~~l~~~~~~---------~iP~~~--------------~~~~~~---~~~~~-~-------------v~~-- 310 (422)
+|.|..+ .+++..... .++... ...+.+ ...+. . +.+
T Consensus 243 ~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 321 (406)
T PRK11551 243 LPSLLVG-QGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGFAAGLF 321 (406)
T ss_pred HHHHHHh-CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHH
Confidence 8888765 455443211 000000 000000 00000 0 001
Q ss_pred --------hhhhhhhhcCccccccceehhhHHHHHHHHHHHHHHHHHhHhhC
Q 014600 311 --------ISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSYQSMS 354 (422)
Q Consensus 311 --------~~~~~~~~g~r~~g~~~~~s~~~~~~K~~~a~~~~i~g~~l~~~ 354 (422)
..+..+....++.|. ..|..+....++..+++.+.|.+.+..
T Consensus 322 ~~~~~~~~~~~~~~~~p~~~~g~--~~g~~~~~~~~g~~~g~~~~g~l~~~~ 371 (406)
T PRK11551 322 VVGGQSVLYALAPLFYPTQVRGT--GVGAAVAVGRLGSMAGPLLAGQLLALG 371 (406)
T ss_pred HHhHHHHHHHHHHHHcchhhhhh--hhhHHHHhhhHHHHHHhhhHhhhhccC
Confidence 122344556677788 899999999999999999999987754
No 48
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.72 E-value=1.1e-15 Score=153.66 Aligned_cols=292 Identities=8% Similarity=-0.012 Sum_probs=185.7
Q ss_pred HHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCccch
Q 014600 45 TYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLK 123 (422)
Q Consensus 45 ~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~~ 123 (422)
++....+++. |++..++|++.++..+..++..++.|+++||+||||. +..+.++.+++..+... +++ ..
T Consensus 28 ~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~-~~~~~~~~~~~~~~~~~-------~~~--~~ 97 (412)
T TIGR02332 28 GFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRW-IAGIMVLWGIASTATMF-------ATG--PE 97 (412)
T ss_pred HHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHH-HHHHHHHHHHHHHHHHH-------hcC--HH
Confidence 3444455555 9999999999999999999999999999999999997 55677777766554321 111 11
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchHHHHH
Q 014600 124 VETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYR 203 (422)
Q Consensus 124 ~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~~~~~~~~ 203 (422)
.+.+.+.+.+++.+.......++..|+.+ ++||++..++.+....+|..+++.++..+..... ..+..+||
T Consensus 98 ----~l~~~r~l~G~~~~~~~~~~~~~~~~~~~-~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~----~~~~~gwr 168 (412)
T TIGR02332 98 ----SLYLLRILVGIAEAGFLPGILLYLTFWFP-AYFRARANALFMIAMPVTMALGLILSGYILALDG----LMALKGWQ 168 (412)
T ss_pred ----HHHHHHHHHHHHHhhHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----CCCccchh
Confidence 12223446777777766666677888876 6789999999988888888888877665543100 00134899
Q ss_pred HHHHHHHHHHHHHHhhhhccccCcccccc-----cC----------------CC----c---chhhhHHHHHHhHHHHHH
Q 014600 204 WIAYSSIFIGCCFVGIFLSRTEEPRLKMG-----LR----------------GN----S---HARISWAYWFKKILYYQV 255 (422)
Q Consensus 204 ~~~~i~~~i~~i~~~i~~~~~~E~~~~~~-----~~----------------~~----~---~~~~~~~~~~~n~~f~~~ 255 (422)
+.+.+.++++++..++.++.+||++.+.. ++ ++ . ..++.+++++ +|.++..
T Consensus 169 ~~f~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 247 (412)
T TIGR02332 169 WLFLLEGFPSVILGVMTWFWLDDSPDKAKWLDEEDKKALKEMIDNDQLTLEQPEGAFAHAAMPQRSMLREIF-TPAIMLY 247 (412)
T ss_pred HHHHHHHHHHHHHHHHHhhccCCCcccCCCCCHHHHHHHHHHHHhccccccccccccccccccHHHHHHHhc-ChHHHHH
Confidence 99998888877766677777888653210 00 00 0 0012234433 5677777
Q ss_pred HHHHHHHHHHHHhhhHHHHHHhhhc-cCccchhH---hHHHHHH---------------------HHHHH----HHHHHH
Q 014600 256 ALVYMLTRLVVNVSQAYLAFYVIND-LRMGQSAK---ALVPAII---------------------YICSF----IVSILL 306 (422)
Q Consensus 256 ~~~~~~~~~~~~~~~~y~~~y~~~~-~~l~~~~~---~~iP~~~---------------------~~~~~----~~~~~~ 306 (422)
.+.+++.........+|+|.|+.+. .+.+.... ...|.+. .+..+ +...+.
T Consensus 248 ~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~~~~ 327 (412)
T TIGR02332 248 TLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGWLLA 327 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHHHHH
Confidence 7777777777778889999999873 34432221 1111100 00000 000000
Q ss_pred H--------HH-------H--------hhhhhhhhcCccccccceehhhHHHHHHHHHHHHHHHHHhHhhCC-Ccc
Q 014600 307 Q--------VT-------G--------ISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSYQSMSP-TVL 358 (422)
Q Consensus 307 ~--------v~-------~--------~~~~~~~~g~r~~g~~~~~s~~~~~~K~~~a~~~~i~g~~l~~~G-y~~ 358 (422)
. +. + ....++..+.+..|. .+|..+...++|+++++.+.|.+.+..| |+.
T Consensus 328 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~ 401 (412)
T TIGR02332 328 SATDHNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQARAI--AIAVINATGNIGSALSPFLIGILKDATGSFNS 401 (412)
T ss_pred HhcCCHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHHHHH--HHHHHHHhhhhhhhhhhhhcccccccCCCCch
Confidence 0 00 0 001122345566777 8999999999999999999999988775 653
No 49
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.72 E-value=9.5e-15 Score=145.83 Aligned_cols=280 Identities=12% Similarity=-0.023 Sum_probs=174.1
Q ss_pred HHHHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCccc
Q 014600 43 WFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTL 122 (422)
Q Consensus 43 ~~~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~ 122 (422)
....+|....|.|+|..++|++.++..+..++..|+.|+++||+||||. +..+....+++....-. +++ .
T Consensus 28 ~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~-l~~~~~l~~~~~~~~~~-------a~~--~ 97 (393)
T PRK09705 28 VGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRS-VAISLLLIAVGALMREL-------YPQ--S 97 (393)
T ss_pred cchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHH-HHHHHHHHHHHHHHHHH-------Ccc--h
Confidence 3456666666679999999999999999999999999999999999998 55788888887665431 221 1
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchHHHH
Q 014600 123 KVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQY 202 (422)
Q Consensus 123 ~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~~~~~~~ 202 (422)
. .+++.+++.+++.+...+...+++.+..+ +||++..+....+...|..++..+.+.+.+.. .+|
T Consensus 98 ~----~ll~~r~l~Gig~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~---------~~w 162 (393)
T PRK09705 98 A----LLLSSALLGGVGIGIIQAVMPSVIKRRFQ--QRTPLVMGLWSAALMGGGGLGAAITPWLVQHS---------ETW 162 (393)
T ss_pred H----HHHHHHHHHHhHHHHHhhhhhHHHHHHcc--ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhc---------CCH
Confidence 1 23334567888888877777888888763 68999999988888888888877665544321 256
Q ss_pred HHHHHHHHHHHHHHHhhhhccccCcccccccCCCcchhhhHHHHHHhHHHHHHHHHHHHHHHHHHhhhHHHHHHhhhccC
Q 014600 203 RWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLR 282 (422)
Q Consensus 203 ~~~~~i~~~i~~i~~~i~~~~~~E~~~~~~~~~~~~~~~~~~~~~~n~~f~~~~~~~~~~~~~~~~~~~y~~~y~~~~~~ 282 (422)
++...+.++..++.....+...++++.++ ++++.+ .++.+|+|+.+.....+.+..........|.|.|+.+ .+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~-~g 236 (393)
T PRK09705 163 YQTLAWWALPAVVALFAWWWQSAREVASS-HKTTTT----PVRVVFTPRAWTLGVYFGLINGGYASLIAWLPAFYIE-IG 236 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCccc-cCCCcC----CcccccCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cC
Confidence 66554444443333222222223222211 111111 1344567777666555555556666778899999987 46
Q ss_pred ccchhHhHH---HHHH--------------------HH-------HHHHHHHHHH---------HHHhh----------h
Q 014600 283 MGQSAKALV---PAII--------------------YI-------CSFIVSILLQ---------VTGIS----------M 313 (422)
Q Consensus 283 l~~~~~~~i---P~~~--------------------~~-------~~~~~~~~~~---------v~~~~----------~ 313 (422)
.+....+.. ..+. .+ .+.......+ +.+.+ .
T Consensus 237 ~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~ 316 (393)
T PRK09705 237 ASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPVLWAMVCGLGLGGAFPLCLLL 316 (393)
T ss_pred CChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHhccchHHHHHHH
Confidence 654432100 0000 00 1111000000 01111 1
Q ss_pred hhhhhc-CccccccceehhhHHHHHHHHHHHHHHHHHhHhhCC
Q 014600 314 QNVLVG-EDLSGCAFVCGTLSFLDKMSCGIAVYVLQSYQSMSP 355 (422)
Q Consensus 314 ~~~~~g-~r~~g~~~~~s~~~~~~K~~~a~~~~i~g~~l~~~G 355 (422)
..+..+ ++..|. .++..+...+++..+++.+.|++.+..|
T Consensus 317 ~~~~~~~~~~~g~--~~g~~~~~~~~~~~~gp~~~G~l~~~~g 357 (393)
T PRK09705 317 ALDHSVQPAIAGK--LVAFMQGIGFIIAGLAPWFSGVLRSISG 357 (393)
T ss_pred HHhhcCCHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 122222 344566 8888889999999999999999999876
No 50
>PRK12382 putative transporter; Provisional
Probab=99.72 E-value=1.6e-14 Score=143.95 Aligned_cols=304 Identities=12% Similarity=0.066 Sum_probs=173.7
Q ss_pred eeeeeeeccchhHHHHHHHHHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHH
Q 014600 24 WSVLYYGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAV 102 (422)
Q Consensus 24 ~~~~~y~~g~~~~~~~~~~~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i 102 (422)
+..+...++.+...+...+..+.++.|..+. |+|+.++|++.+...+..++.+|+.|+++||+||||++ +.+.+...+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l-~~~~~~~~~ 93 (392)
T PRK12382 15 FSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSA-LQGMLACGL 93 (392)
T ss_pred ccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHH-HHHHHHHHH
Confidence 3444455566666666677778888887765 99999999999999999999999999999999999984 455555554
Q ss_pred HHHHh-hcCccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHH
Q 014600 103 SFSSV-FGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYA 181 (422)
Q Consensus 103 ~~~~l-f~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~ 181 (422)
+.... .....| .. ....+...++.+.+.+++.+....+..++..+..+ +|||++..++......+|..+++.
T Consensus 94 ~~~~~~~~~~~~-----~~-~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~-~~~r~~a~~~~~~~~~~g~~~g~~ 166 (392)
T PRK12382 94 AGLAYLLAAILP-----VS-APFKFALLVVGRLILGFGESQLLTGALTWGLGLVG-PKHSGKVMSWNGMAMYGALAAGAP 166 (392)
T ss_pred HHHHHHhhhccc-----cc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC-ccccchhhhHHHHHHHHHHHHHHH
Confidence 43221 100011 00 00011222333456788888777777788888876 689999999988777777777766
Q ss_pred HHHHHHhhccCCCCCchHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccCCCcchhhhHHHHHHhHHHHHHHHHHHH
Q 014600 182 IAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKKILYYQVALVYML 261 (422)
Q Consensus 182 ~~~~l~~~~~~~g~~~~~~~~~~~~~i~~~i~~i~~~i~~~~~~E~~~~~~~~~~~~~~~~~~~~~~n~~f~~~~~~~~~ 261 (422)
++..+.. ..+|++.+.+..++.++.. ......||.+. +++++.+.++..+...+ +. ...++
T Consensus 167 ~~~~l~~----------~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~-----~~~~l 227 (392)
T PRK12382 167 LGLLLHS----------HFGFAALALTTMVLPLLAW-AFNGTVRKVPA--HAGERPSLWSVVGLIWK-PG-----LGLAL 227 (392)
T ss_pred HHHHHHh----------ccChHHHHHHHHHHHHHHH-HHHHhccCCCC--CcccCchHHHHHHHHHH-hH-----HHHHH
Confidence 6544432 2367776655433333222 11222233211 11112222222222211 11 11122
Q ss_pred HHHHHHhhhHHHHHHhhhccCccchhHh-------HH---HHHH------------------HHHHHHHHHHHH------
Q 014600 262 TRLVVNVSQAYLAFYVINDLRMGQSAKA-------LV---PAII------------------YICSFIVSILLQ------ 307 (422)
Q Consensus 262 ~~~~~~~~~~y~~~y~~~~~~l~~~~~~-------~i---P~~~------------------~~~~~~~~~~~~------ 307 (422)
..........+.+.|..+. +....... .+ +..- ...+.+.....+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (392)
T PRK12382 228 QGVGFAVIGTFVSLYFASK-GWAMAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVAL 306 (392)
T ss_pred HHHHHhHHHHHHHHHHHhc-CCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHH
Confidence 2233444556777777653 33322110 00 0000 000100000000
Q ss_pred ----HHH-------hh---hhhhhhcCccccccceehhhHHHHHHHHHHHHHHHHHhHhhCCCc
Q 014600 308 ----VTG-------IS---MQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSYQSMSPTV 357 (422)
Q Consensus 308 ----v~~-------~~---~~~~~~g~r~~g~~~~~s~~~~~~K~~~a~~~~i~g~~l~~~Gy~ 357 (422)
+.+ +. ...+..++++.|. .+|..+....+|.++++.+.|++.+..||.
T Consensus 307 ~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~--~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~ 368 (392)
T PRK12382 307 AGAALTGAGCSLIFPALGVEVVKRVPSQVRGT--ALGGYAAFQDIAYGVSGPLAGMLATSFGYP 368 (392)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHhCch
Confidence 001 11 1233456777888 999999999999999999999999988875
No 51
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.72 E-value=1.2e-14 Score=144.43 Aligned_cols=230 Identities=11% Similarity=0.003 Sum_probs=150.9
Q ss_pred eeeccchhHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHh
Q 014600 28 YYGSGHMLNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSV 107 (422)
Q Consensus 28 ~y~~g~~~~~~~~~~~~~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~l 107 (422)
.+..+.+..........+.++.+..|.|.+..++|++.+...+...+..|+.|+++||+||||. +..+....+++..++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~-~~~~~~~~~~~~~l~ 85 (382)
T PRK10091 7 SLALGTFGLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHI-LLFLVALCVIGNAMF 85 (382)
T ss_pred HHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHH-HHHHHHHHHHHHHHH
Confidence 3444555566666666777787777779999999999999999999999999999999999877 556777777776543
Q ss_pred hcCccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 014600 108 FGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVF 187 (422)
Q Consensus 108 f~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~ 187 (422)
-. ++ +.+ .+.+.+.+.+++.+.......++..++.+ +++|++..+....+..+|..+++.++..+.
T Consensus 86 ~~-------~~--~~~----~l~~~r~l~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~ 151 (382)
T PRK10091 86 TL-------SS--SYL----MLAIGRLVSGFPHGAFFGVGAIVLSKIIK-PGKVTAAVAGMVSGMTVANLLGIPLGTYLS 151 (382)
T ss_pred HH-------hC--cHH----HHHHHHHHHHhhhHHHHHHHHHHHHHhCC-hHHhhHHHHHHHHHHHHHHHHhccHHHHHh
Confidence 21 11 122 12233456777777666666677778764 577888888777777777766654443332
Q ss_pred hhccCCCCCchHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccCCCcchhhhHHHHHHhHHHHHHHHHHHHHHHHHH
Q 014600 188 SVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKKILYYQVALVYMLTRLVVN 267 (422)
Q Consensus 188 ~~~~~~g~~~~~~~~~~~~~i~~~i~~i~~~i~~~~~~E~~~~~~~~~~~~~~~~~~~~~~n~~f~~~~~~~~~~~~~~~ 267 (422)
+ ..+||+.+.+.+++.++..+..++..||+++++ +.+.++.+ +.+||++++.......+......
T Consensus 152 ~----------~~gwr~~f~~~~~~~~~~~~~~~~~lp~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 216 (382)
T PRK10091 152 Q----------EFSWRYTFLLIAVFNIAVLASIYFWVPDIRDEA----KGGLREQF-HFLRSPAPWLIFAATMFGNAGVF 216 (382)
T ss_pred h----------hccHHHHHHHHHHHHHHHHHHHHHhCCCCCccc----ccCHHHHH-HHhcChHHHHHHHHHHHHHHHHH
Confidence 1 247899888887777666655566677753221 11223333 35677766654444444434444
Q ss_pred hhhHHHHHHhhhccCccchh
Q 014600 268 VSQAYLAFYVINDLRMGQSA 287 (422)
Q Consensus 268 ~~~~y~~~y~~~~~~l~~~~ 287 (422)
....|.+.|+.+..+.++..
T Consensus 217 ~~~~~~~~~~~~~~g~s~~~ 236 (382)
T PRK10091 217 AWFSYIKPYMMFISGFSETS 236 (382)
T ss_pred HHHHHHHHHHHHhcCCCHHH
Confidence 45567777887766766543
No 52
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.72 E-value=1.2e-14 Score=145.09 Aligned_cols=231 Identities=9% Similarity=-0.051 Sum_probs=150.1
Q ss_pred eeeeccchhHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHH
Q 014600 27 LYYGSGHMLNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSS 106 (422)
Q Consensus 27 ~~y~~g~~~~~~~~~~~~~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~ 106 (422)
..+..+.+...+........++....|.|.++...+++.....+..++..|+.|+++||+||||. ++++....+++..+
T Consensus 6 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~v-l~~~~~~~~~~~~~ 84 (393)
T PRK11195 6 YAIMAAQFFSALADNALLFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRV-MFIANGIKLLGCLL 84 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchh-hHHHHHHHHHHHHH
Confidence 34556666666655555555555566668999999999999999999999999999999999998 45666666665443
Q ss_pred hhcCccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 014600 107 VFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIV 186 (422)
Q Consensus 107 lf~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l 186 (422)
+.. .++ . .+.+.+.+++.+...+...++++|+.+ ++||++.+++......+|.++++.+++.+
T Consensus 85 ~~~-------~~~--~-------~~~r~l~G~~~a~~~pa~~a~i~~~~~-~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l 147 (393)
T PRK11195 85 MLF-------GIH--P-------LLAYGLVGIGAAAYSPAKYGILTELLP-GEKLVKANGWMEGSTIAAILLGTVLGGAL 147 (393)
T ss_pred HHH-------HHH--H-------HHHHHHHHHHHHHHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 221 111 1 222346788888888999999999987 68999999999988888888888877666
Q ss_pred HhhccCCCCCchHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccCC-C-----cchhhhHHHHHHhHHHHHHHHHHH
Q 014600 187 FSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRG-N-----SHARISWAYWFKKILYYQVALVYM 260 (422)
Q Consensus 187 ~~~~~~~g~~~~~~~~~~~~~i~~~i~~i~~~i~~~~~~E~~~~~~~~~-~-----~~~~~~~~~~~~n~~f~~~~~~~~ 260 (422)
.+. .|+..+.+.+....+. .+..+.+||++.++++++ + .+.++.++.++|||.++.......
T Consensus 148 ~~~-----------~~~~~~~i~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 215 (393)
T PRK11195 148 ADP-----------HAEAALAVCALIYLLA-ALFNLFIPRLGARRPGQSWNPIALLRDFFHACRVLWRDKLGRFSLAGTT 215 (393)
T ss_pred HHH-----------HHHHHHHHHHHHHHHH-HHHHhcCCCCcccccccCCCHHHHHHHHHHHHHHHHhCchhHHHHHHHH
Confidence 531 2444444443333322 333456676543221111 1 112234567788888765443333
Q ss_pred HHHHHHHhhhHHHHHHhhhccCccchh
Q 014600 261 LTRLVVNVSQAYLAFYVINDLRMGQSA 287 (422)
Q Consensus 261 ~~~~~~~~~~~y~~~y~~~~~~l~~~~ 287 (422)
+.+.........++.|..+..+.++..
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~lg~s~~~ 242 (393)
T PRK11195 216 LFWGAGATLRFLVLAWAPVALGITLNQ 242 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCChhH
Confidence 333444444556667777666765543
No 53
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.72 E-value=2.3e-15 Score=153.89 Aligned_cols=296 Identities=14% Similarity=0.066 Sum_probs=193.8
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcC
Q 014600 31 SGHMLNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGG 110 (422)
Q Consensus 31 ~g~~~~~~~~~~~~~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~ 110 (422)
.+.+...+........+|.+..+.|.++.++|++.+...+..++..|+.|+++||+||||. ++.+.+..+++..++..
T Consensus 9 ~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~-~~~~~~~~~~~~~~~~~- 86 (485)
T TIGR00711 9 LGTFMAVLDSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRL-FLISTFAFTLGSLLCGV- 86 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHH-HHHHHHHHHHHHHHHhC-
Confidence 3444555555666667777777779999999999999999999999999999999999988 45677777776654331
Q ss_pred ccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 014600 111 CMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVS 190 (422)
Q Consensus 111 ~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~ 190 (422)
.+ +.. .+++.+.+.+++.+....+..+++.|..+ +++|++..++......+|..+++.+++.+.+
T Consensus 87 ------~~--~~~----~l~~~~~~~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-- 151 (485)
T TIGR00711 87 ------AP--NLE----LMIIFRVIQGFGGGPLIPLSFSTLLNIYP-PEKRGRAMAIWGLTVLVAPALGPTLGGWIIE-- 151 (485)
T ss_pred ------cC--CHH----HHHHHHHHHHhhhhhHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHHHHhhhhhccHhHhcc--
Confidence 11 111 12233456778888888888899999986 6899999999888888888877766544332
Q ss_pred cCCCCCchHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccC-----------------------CCcchh-------
Q 014600 191 TAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLR-----------------------GNSHAR------- 240 (422)
Q Consensus 191 ~~~g~~~~~~~~~~~~~i~~~i~~i~~~i~~~~~~E~~~~~~~~-----------------------~~~~~~------- 240 (422)
..+|++.+++.++++++..++..+..||++.++.++ ++....
T Consensus 152 --------~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (485)
T TIGR00711 152 --------NYHWRWIFLINVPIGIIVVVVAFFILPRDKPAASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILI 223 (485)
T ss_pred --------CcCceehhhhhhHHHHHHHHHHHHHcCCccccccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHH
Confidence 247888888777777766666666666643211100 000000
Q ss_pred --------------------hh--HHHHHHhHHHHHHHHHHHHHHHHHHhhhHHHHHHhhhccCccchhHh--HHHH---
Q 014600 241 --------------------IS--WAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKA--LVPA--- 293 (422)
Q Consensus 241 --------------------~~--~~~~~~n~~f~~~~~~~~~~~~~~~~~~~y~~~y~~~~~~l~~~~~~--~iP~--- 293 (422)
+. -.+++|||+++...+..++..........++|.|+++..+.++.... ..|.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~ 303 (485)
T TIGR00711 224 LSITGLVAIIAFVVWELTDDNPLVDLRLFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLA 303 (485)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCccCHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 00 02467888877666666666666667778899999988787664321 1110
Q ss_pred -------HH-----------HHHHHHHHH-----HH---------------H-HHHhh----------hhhhhhcCcccc
Q 014600 294 -------II-----------YICSFIVSI-----LL---------------Q-VTGIS----------MQNVLVGEDLSG 324 (422)
Q Consensus 294 -------~~-----------~~~~~~~~~-----~~---------------~-v~~~~----------~~~~~~g~r~~g 324 (422)
.. ...+..+.. .. . +.+.+ ......++++.|
T Consensus 304 ~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g 383 (485)
T TIGR00711 304 PMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIA 383 (485)
T ss_pred HHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHh
Confidence 00 011111000 00 0 01111 122334667788
Q ss_pred ccceehhhHHHHHHHHHHHHHHHHHhHhh
Q 014600 325 CAFVCGTLSFLDKMSCGIAVYVLQSYQSM 353 (422)
Q Consensus 325 ~~~~~s~~~~~~K~~~a~~~~i~g~~l~~ 353 (422)
. ..|..++.+++|+++|..+.+.+++.
T Consensus 384 ~--~~~~~~~~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 384 R--GSSLSNFTRQLGGSIGTALITTILTN 410 (485)
T ss_pred H--HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8 89999999999999999999999874
No 54
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.72 E-value=2.6e-14 Score=142.63 Aligned_cols=234 Identities=12% Similarity=0.021 Sum_probs=141.8
Q ss_pred eeeeeeccchhHHHHHHHHHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHH
Q 014600 25 SVLYYGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVS 103 (422)
Q Consensus 25 ~~~~y~~g~~~~~~~~~~~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~ 103 (422)
....+-++.+...+......++++.|+++. |.+++++|++.+...+...+..|+.|.++||+||||.+++.+.+..++.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~dr~g~r~~~~~~~~~~~~~~ 95 (393)
T PRK15011 16 TSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGRSDKRGDRKSLIVFCCLLGVLA 95 (393)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHH
Confidence 344555667778888788888999999887 9999999999988888778887887777999999998776665554444
Q ss_pred HHHhhcCccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccch--hhHHHHHHHHHHHHHHHHHH
Q 014600 104 FSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSR--VVLTSCRNAFTMVANLSLYA 181 (422)
Q Consensus 104 ~~~lf~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR--~~l~~~~~~~~~ig~~l~~~ 181 (422)
..+.. ++ .+.+ . +++...+.+...+.......++.++..+ +++| +..+++.+....+|.++++.
T Consensus 96 ~~~~~-------~~--~~~~-~---l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~lg~~~g~~ 161 (393)
T PRK15011 96 CTLFA-------WN--RNYF-V---LLFVGVFLSSFGSTANPQMFALAREHAD-KTGREAVMFSSFLRAQVSLAWVIGPP 161 (393)
T ss_pred HHHHH-------Hh--hHHH-H---HHHHHHHHHHHHHhhHHHHHHHHHHHhh-hccchHHHHHHHHHHHHHHHHHHhhH
Confidence 33221 11 1111 1 1112223333344444445566666543 3444 34557777777888887776
Q ss_pred HHHHHHhhccCCCCCchHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccCCCcchhhhHHHHHHhHH-HHHHHHHHH
Q 014600 182 IAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKKIL-YYQVALVYM 260 (422)
Q Consensus 182 ~~~~l~~~~~~~g~~~~~~~~~~~~~i~~~i~~i~~~i~~~~~~E~~~~~~~~~~~~~~~~~~~~~~n~~-f~~~~~~~~ 260 (422)
++..+.+ ..+|++.+++.+++.++..+.+++..||.+.+++++ +.+ .+ ...+|++ .+.......
T Consensus 162 i~~~l~~----------~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~---~~~~~~~~~~~~~~~~~ 226 (393)
T PRK15011 162 LAYALAM----------GFSFTVMYLSAAVAFIVCGVMVWLFLPSMRKELPLA-TGT-LE---APRRNRRDTLLLFVICT 226 (393)
T ss_pred HHHHHHH----------hcChHHHHHHHHHHHHHHHHHHHhhcCccCCCCccc-ccc-cc---ccccccccHHHHHHHHH
Confidence 6554432 238898888887777777777777778754322111 111 11 1123332 232222223
Q ss_pred HHHHHHHhhhHHHHHHhhhccCccchh
Q 014600 261 LTRLVVNVSQAYLAFYVINDLRMGQSA 287 (422)
Q Consensus 261 ~~~~~~~~~~~y~~~y~~~~~~l~~~~ 287 (422)
+.+........+.|.|+++..+++...
T Consensus 227 ~~~~~~~~~~~~~p~~l~~~~~~~~~~ 253 (393)
T PRK15011 227 LMWGTNSLYIINMPLFIINELHLPEKL 253 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 333334445567888888777776543
No 55
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.71 E-value=4.7e-15 Score=147.78 Aligned_cols=219 Identities=15% Similarity=0.082 Sum_probs=142.9
Q ss_pred HHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCc
Q 014600 41 ACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTS 120 (422)
Q Consensus 41 ~~~~~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~ 120 (422)
....+.++.+.++.|+|+.++|++.++..+...+.+|+.|+++||+||||. +..+....+++...... .+
T Consensus 25 ~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~-~~~~~~~~~~~~~~~~~-------~~-- 94 (394)
T PRK11652 25 TIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPV-ILVGMSIFILGTLVALF-------AH-- 94 (394)
T ss_pred HHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHH-HHHHHHHHHHHHHHHHH-------Hc--
Confidence 333444566666669999999999999999999999999999999999887 55666666666544321 11
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchHH
Q 014600 121 TLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLEN 200 (422)
Q Consensus 121 ~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~~~~~ 200 (422)
+.+ ...+...+.+++.+.......++..|..+ +++|++..+..+.+..++..+++.+++.+.+ ..
T Consensus 95 ~~~----~l~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~----------~~ 159 (394)
T PRK11652 95 SLT----VLIAASAIQGLGTGVGGVMARTLPRDLYE-GTQLRHANSLLNMGILVSPLLAPLIGGLLTT----------LF 159 (394)
T ss_pred cHH----HHHHHHHHHHhhhhHHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------cc
Confidence 111 12222345666666555555667777654 5678888888777777777666655543322 23
Q ss_pred HHHHHHHHHHHHHHHHHhhhhccccCcccccccCCCcchhhhHHHHHHhHHHHHHHHHHHHHHHHHHhhhHHHHHHhhhc
Q 014600 201 QYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVIND 280 (422)
Q Consensus 201 ~~~~~~~i~~~i~~i~~~i~~~~~~E~~~~~~~~~~~~~~~~~~~~~~n~~f~~~~~~~~~~~~~~~~~~~y~~~y~~~~ 280 (422)
+|++.+.+.+++.++..++..+..||++.++ +++.+.++.+++.+|||+++......+...........+.+.|+.+.
T Consensus 160 g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (394)
T PRK11652 160 GWRACYLFLLLLGAGVTFSMARWMPETRPAD--ARRTRVLASYRTLLSNRRFNCYLLMLIGTLAGIAVFEACSGVLMGAV 237 (394)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHhCCccCccc--cchhHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHhChHHHHHH
Confidence 7888887776666655555556678754322 22223567788899999887655444444444445556667777776
Q ss_pred cCccch
Q 014600 281 LRMGQS 286 (422)
Q Consensus 281 ~~l~~~ 286 (422)
.+.++.
T Consensus 238 ~g~~~~ 243 (394)
T PRK11652 238 LGLSSM 243 (394)
T ss_pred cCCCHH
Confidence 666554
No 56
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.71 E-value=4.7e-14 Score=141.59 Aligned_cols=232 Identities=10% Similarity=-0.038 Sum_probs=155.7
Q ss_pred HHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCcc
Q 014600 36 NDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCR 115 (422)
Q Consensus 36 ~~~~~~~~~~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~ 115 (422)
..+.+.+..+.++.+.++.|+++.+.|++.+...+...+..|+.|+++||+||||. +..+..+.+++..+.. |
T Consensus 15 ~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~-~~~g~~l~~~g~~l~~----~-- 87 (410)
T TIGR00885 15 WGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAG-ILLGLFLYALGAFLFW----P-- 87 (410)
T ss_pred HHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHH-HHHHHHHHHHHHHHHH----H--
Confidence 34444555566776655569999999999999999999999999999999999887 6677788777765432 1
Q ss_pred ccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCCC
Q 014600 116 ILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVS-TAKT 194 (422)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~-~~~g 194 (422)
....+.. ..+++...+.+.+.+..+++.+++..++.+ +++|++..+..+.+..+|..+++.+..+++... +..+
T Consensus 88 -~~~~~~~---~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~ 162 (410)
T TIGR00885 88 -AAEIMNY---TLFLVGLFILTAGLGFLETAANPYILVMGP-ESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQS 162 (410)
T ss_pred -HHhhccH---HHHHHHHHHHHhhHHHHHhhhhHHHHHHCC-HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccch
Confidence 1111111 223333457888899999999999988875 567888889988999999999888877765431 1000
Q ss_pred C---------------CchHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccCCCcchhhhHHHHHHhHHHHHHHHHH
Q 014600 195 H---------------ADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKKILYYQVALVY 259 (422)
Q Consensus 195 ~---------------~~~~~~~~~~~~i~~~i~~i~~~i~~~~~~E~~~~~~~~~~~~~~~~~~~~~~n~~f~~~~~~~ 259 (422)
. .....+|++.+.+.+++.++..++.. ..|+++.+++++++.+.++..++++|||.++...+..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 241 (410)
T TIGR00885 163 QDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIM-LTKMPALNHSDAKQISFSASLSRLARIRHYREGVIAQ 241 (410)
T ss_pred hhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCCCCCccccccccchhhHHHHHhChhHHHHHHHH
Confidence 0 00134699988877776665543332 3333322222222223445567889999987755555
Q ss_pred HHHHHHHHhhhHHHHHHhhhc
Q 014600 260 MLTRLVVNVSQAYLAFYVIND 280 (422)
Q Consensus 260 ~~~~~~~~~~~~y~~~y~~~~ 280 (422)
++......+..+|++.|..++
T Consensus 242 f~yvg~e~~~~s~l~~y~~~~ 262 (410)
T TIGR00885 242 FFYVGVQIMCWTFIIQYAVRL 262 (410)
T ss_pred HHHHHHHHHHHHHHHHHHhhc
Confidence 554444446678999998764
No 57
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.70 E-value=7.4e-15 Score=147.78 Aligned_cols=300 Identities=12% Similarity=0.025 Sum_probs=175.2
Q ss_pred eeeeccchhHHHHHHHHHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHH
Q 014600 27 LYYGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFS 105 (422)
Q Consensus 27 ~~y~~g~~~~~~~~~~~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~ 105 (422)
+...++.+......... .+..+++.+. |++..+.+++.++..+...+..|+.|+++||+|||+. +..+.+..+++..
T Consensus 21 ~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~-l~~~~~~~~~~~~ 98 (426)
T PRK12307 21 FSAWLGYVFDGFDFMLI-FYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPL-MMWSIVAYSVGTG 98 (426)
T ss_pred HHHHHHHHHHHhHHHHH-HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHH-HHHHHHHHHHHHH
Confidence 33334444333333333 3444445554 9999999999999999999999999999999999887 5567777777654
Q ss_pred HhhcCccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHH
Q 014600 106 SVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFI 185 (422)
Q Consensus 106 ~lf~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~ 185 (422)
.... .+ +.+ .+.+.+.+.+++.+.......++..|..+ +++|++..++...+..+|.++++.+...
T Consensus 99 ~~~~-------~~--~~~----~l~~~r~l~G~g~g~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~lg~~~~~~l~~~ 164 (426)
T PRK12307 99 LSGL-------AS--GVI----MLTLSRFIVGMGMAGEYACASTYAVESWP-KHLKSKASAFLVSGFGIGNIIAAYFMPS 164 (426)
T ss_pred HHHH-------Hh--HHH----HHHHHHHHHHHHHhhHHHHHHHHHHHhCC-HhHhhHhhhHHHHHHhHHHHHHHHHHHH
Confidence 4321 11 111 22333456777777777778888899876 6789999999888888888877655433
Q ss_pred HHhhccCCCCCchHHHHHHHHHHHHHHHHHHHhhhhccccCcccc--cc--cCCC--c----chhhhHHHHHHhHHHHHH
Q 014600 186 VFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLK--MG--LRGN--S----HARISWAYWFKKILYYQV 255 (422)
Q Consensus 186 l~~~~~~~g~~~~~~~~~~~~~i~~~i~~i~~~i~~~~~~E~~~~--~~--~~~~--~----~~~~~~~~~~~n~~f~~~ 255 (422)
+.+ ..+|++.+.+..+..++ .+......+|++.. ++ ++++ . ..+..+++++|||.++..
T Consensus 165 l~~----------~~~w~~~f~i~~~~~~~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (426)
T PRK12307 165 FAE----------AYGWRAAFFVGLLPVLL-VIYIRARAPESKEWEEAKLSGKGKHSQSAWSVFSLSMKGLFNRAQFPLT 233 (426)
T ss_pred Hcc----------cCCHHHHHHHHHHHHHH-HHHHHHHCCCChHHHHhhhhccccccccchhhhhHHHHHHHhhchHHHH
Confidence 322 23788877664332222 22212223443210 00 0000 0 012356788899887654
Q ss_pred HHHHHHH---HHHHHhhhHHHHHHhhhccCccchhHh---------HH---HHHH-----------HHHHHHH-------
Q 014600 256 ALVYMLT---RLVVNVSQAYLAFYVINDLRMGQSAKA---------LV---PAII-----------YICSFIV------- 302 (422)
Q Consensus 256 ~~~~~~~---~~~~~~~~~y~~~y~~~~~~l~~~~~~---------~i---P~~~-----------~~~~~~~------- 302 (422)
...+.+. .........++|.|+.+. +.+..... .+ +... ...+.+.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~ 312 (426)
T PRK12307 234 LCVFIVLFSIFGANWPIFGLLPTYLAGE-GFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFP 312 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 3322221 122223566888888764 55433211 00 0000 0001000
Q ss_pred HHHHH----------HHH------------hhhhhhhhcCccccccceehhhHHHHHHHHHHHHHHHHHhHhhCCC
Q 014600 303 SILLQ----------VTG------------ISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSYQSMSPT 356 (422)
Q Consensus 303 ~~~~~----------v~~------------~~~~~~~~g~r~~g~~~~~s~~~~~~K~~~a~~~~i~g~~l~~~Gy 356 (422)
..... +.+ +.+..+..+++..|. ..|+.....++++.+++.+.|++.+..|+
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~--~~g~~~~~~~~~~~~gp~~~g~l~~~~g~ 386 (426)
T PRK12307 313 LFRIPQDNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGL--GTGLIYNLAATSGTFNSMAATWLGITMGL 386 (426)
T ss_pred HHHHccccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhh--hhhHHHHHHhHHHHHHHHHHHHHHHcccH
Confidence 00000 000 122345567777788 89998889999999999999998776664
No 58
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.69 E-value=8.7e-15 Score=149.27 Aligned_cols=210 Identities=11% Similarity=0.060 Sum_probs=151.3
Q ss_pred CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCccchhhhHHHHHHHH
Q 014600 55 GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAA 134 (422)
Q Consensus 55 gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~~~~~~~~~~~~~ 134 (422)
|+++.+.|.+.+...+...+..++.|+++||+||||. +..+.+..+++..+... ....+. ...++.++
T Consensus 72 ~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~-l~~~~~~~~~~~~~~~~-------~~~~~~----~~l~~~r~ 139 (465)
T TIGR00894 72 KWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWS-IGIGMFLSSVISIVIPW-------AAGGGI----ALVVFCRV 139 (465)
T ss_pred CCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchh-hHHHHHHHHHHHHHHHH-------HHHcCc----hHHHHHHH
Confidence 6888999999999999999999999999999999987 55566666655443211 001111 12233345
Q ss_pred HHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchH-HHHHHHHHHHHHHH
Q 014600 135 IFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLE-NQYRWIAYSSIFIG 213 (422)
Q Consensus 135 l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~~~~-~~~~~~~~i~~~i~ 213 (422)
+.+++.+.......++.+++.+ ++||++..++...+..+|..+++.+...+.. . .+|++.+++.++++
T Consensus 140 ~~G~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~----------~~~gw~~~f~i~~~~~ 208 (465)
T TIGR00894 140 IQGLAQGSVSPATHKIIVKWAP-PKERSRLLGMSTSGFQLGTFIFLPISGWLCE----------SWGGWPMIFYVFGIVG 208 (465)
T ss_pred HHHHhcccchhhHHHHHHhcCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------ccCCCCeehhhhhHHH
Confidence 7888888888888899999986 6899999999998888888887766544332 2 27888888888877
Q ss_pred HHHHhhhhccccCccccccc--------------CC--CcchhhhHHHHHHhHHHHHHHHHHHHHHHHHHhhhHHHHHHh
Q 014600 214 CCFVGIFLSRTEEPRLKMGL--------------RG--NSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYV 277 (422)
Q Consensus 214 ~i~~~i~~~~~~E~~~~~~~--------------~~--~~~~~~~~~~~~~n~~f~~~~~~~~~~~~~~~~~~~y~~~y~ 277 (422)
++..++.+...+|++.++++ ++ +.+.+..+++++++|+++...+.+++..........|+|.|+
T Consensus 209 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l 288 (465)
T TIGR00894 209 CAWSLLWFVFPADDPSIHPCISKFEKKYINSSLQGQKGSTRQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFI 288 (465)
T ss_pred HHHHHHHHHHhcCCcccCCCCCHHHHHHHHhhcccccCCCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77766666666664422110 00 111233588999999998888888887777788889999999
Q ss_pred hhccCccchh
Q 014600 278 INDLRMGQSA 287 (422)
Q Consensus 278 ~~~~~l~~~~ 287 (422)
.+..+.+...
T Consensus 289 ~~~~g~s~~~ 298 (465)
T TIGR00894 289 SWVLRVSGKE 298 (465)
T ss_pred HHHhCcChHH
Confidence 9887776543
No 59
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.69 E-value=3e-14 Score=140.66 Aligned_cols=296 Identities=14% Similarity=0.063 Sum_probs=174.0
Q ss_pred HHHHHHHHh---CCChhHHHHHHHH-----HHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCcccc
Q 014600 46 YLLLFLTDI---GLSPRGAAAVMLS-----GQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRIL 117 (422)
Q Consensus 46 ~l~~f~t~~---gls~~~~g~i~~i-----~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~ 117 (422)
+..+++.+. +.+..+.+.+... ..+...+..|+.|+++||+||||.+ +.+.++..++..+... .|
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l-~~~~~~~~~~~~~~~~--~~---- 86 (394)
T TIGR00883 14 FAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTL-VITLLMMGIGTLLIGL--LP---- 86 (394)
T ss_pred HHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHH-HHHHHHHHHHHHHHhh--CC----
Confidence 445555543 2445666665543 3344456789999999999999985 4677777776554432 12
Q ss_pred CCccc--hhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCC
Q 014600 118 STSTL--KVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTH 195 (422)
Q Consensus 118 ~~~~~--~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~ 195 (422)
+... .+....+++.+.+.+++.+....+..++..|..+ +++|++..+.+..+..+|.++++.+...+...++..
T Consensus 87 -~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~-- 162 (394)
T TIGR00883 87 -SYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAP-PGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDD-- 162 (394)
T ss_pred -ChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCC-cccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH--
Confidence 1110 1111223333456777777777778889999876 689999999999999999888877654443322110
Q ss_pred CchHHHHHHHHHHHHHHHHHHHhhhhccccCccccccc-CCCcchhhhHHHHHHhHH--HHHHHHHHHHHHHHHHhhhHH
Q 014600 196 ADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGL-RGNSHARISWAYWFKKIL--YYQVALVYMLTRLVVNVSQAY 272 (422)
Q Consensus 196 ~~~~~~~~~~~~i~~~i~~i~~~i~~~~~~E~~~~~~~-~~~~~~~~~~~~~~~n~~--f~~~~~~~~~~~~~~~~~~~y 272 (422)
.....+|++.+.+.+++.+++.. .....+|++..+++ +++++.++.+++.+||++ ++......++..........+
T Consensus 163 ~~~~~~w~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (394)
T TIGR00883 163 ALLEWGWRIPFLVSAVLVLIGLY-LRRNLEETPVFEKAQEKHKKKRGPIRETLTKHRKPFLLGLGLVIATTTTFYLITTY 241 (394)
T ss_pred HhhccchHHHHHHHHHHHHHHHH-HHHhcCCChhHHHHHhccccccCCHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00134788887776655554433 23345554422111 112223445677788766 555556666666666677889
Q ss_pred HHHHhhhccCccchhHhH------------HHHHH-----------HH-HHH---HHH-----HHH---H---------H
Q 014600 273 LAFYVINDLRMGQSAKAL------------VPAII-----------YI-CSF---IVS-----ILL---Q---------V 308 (422)
Q Consensus 273 ~~~y~~~~~~l~~~~~~~------------iP~~~-----------~~-~~~---~~~-----~~~---~---------v 308 (422)
.|.|..++.+.+...... .|... .. .+. +.. ... . +
T Consensus 242 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (394)
T TIGR00883 242 LPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLG 321 (394)
T ss_pred HHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHH
Confidence 999998777765543210 01100 00 000 000 000 0 0
Q ss_pred HH----------hhhhhhhhcCccccccceehh-hHHHHHHHHHHHHHHHHHhHhhCC
Q 014600 309 TG----------ISMQNVLVGEDLSGCAFVCGT-LSFLDKMSCGIAVYVLQSYQSMSP 355 (422)
Q Consensus 309 ~~----------~~~~~~~~g~r~~g~~~~~s~-~~~~~K~~~a~~~~i~g~~l~~~G 355 (422)
.+ ..+..+.+.++..+. .++. .++...+|..+++.+.|++.+..|
T Consensus 322 ~g~~~~~~~~~~~~~~~~~~p~~~~~~--~~~~~~~~~~~~g~~~~p~~~g~l~~~~g 377 (394)
T TIGR00883 322 LALIGGMYTGPMGSFLPELFPTEVRYT--GASLAYNLAGAIFGGFAPYIAAALVAMTG 377 (394)
T ss_pred HHHHHHHHhhhHHHHHHHhCCccceee--EeeehhHhHHHHHhhHHHHHHHHHHHHcC
Confidence 00 122345566677777 7776 467778899999999999998876
No 60
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.69 E-value=8.5e-15 Score=144.76 Aligned_cols=224 Identities=12% Similarity=0.049 Sum_probs=157.9
Q ss_pred HHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccC
Q 014600 39 TAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILS 118 (422)
Q Consensus 39 ~~~~~~~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~ 118 (422)
...++.+.++.+.++.|+++.++|.+.++..+..++..|+.|+++||+||||. +..+.+..+++..++.. .+
T Consensus 6 ~~~~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~-~~~~~~~~~i~~~~~~~-------~~ 77 (377)
T PRK11102 6 AIDMYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPV-ILGGTLVFALAAVACAL-------AQ 77 (377)
T ss_pred HHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHH-HHHHHHHHHHHHHHHHH-------Hc
Confidence 34456677788888789999999999999999999999999999999998766 66777777776655432 11
Q ss_pred CccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCch
Q 014600 119 TSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADL 198 (422)
Q Consensus 119 ~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~~~ 198 (422)
+ .+ ...+...+.+++.+...++..++..|..+ +++|++..++.+....+|..+++.++..+.+
T Consensus 78 ~--~~----~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~---------- 140 (377)
T PRK11102 78 T--ID----QLIYMRFLHGLAAAAASVVINALMRDMFP-KEEFSRMMSFVTLVMTIAPLLAPIIGGWLLV---------- 140 (377)
T ss_pred c--HH----HHHHHHHHHHHHHHHHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------
Confidence 1 11 12223346788888888889999999875 6789999999988888888887766654443
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhccccCcccccccCCC--cchhhhHHHHHHhHHHHHHHHHHHHHHHHHHhhhHHHHHH
Q 014600 199 ENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGN--SHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFY 276 (422)
Q Consensus 199 ~~~~~~~~~i~~~i~~i~~~i~~~~~~E~~~~~~~~~~--~~~~~~~~~~~~n~~f~~~~~~~~~~~~~~~~~~~y~~~y 276 (422)
..+|++.+.+.+.+.++..++..+..||++.++++++. ++..+.+++.+|||+++...+...+..........+.|.|
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (377)
T PRK11102 141 WFSWHAIFWVLALAAILAAALVFFFIPETLPKERRQPFHLRTTIRNFASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFV 220 (377)
T ss_pred HcChHHHHHHHHHHHHHHHHHHHHhCCccCcccccCCCChHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHcCHHH
Confidence 23788888877777777666666667775432221111 1223456678899987766655555555555556667777
Q ss_pred hhhccCccchh
Q 014600 277 VINDLRMGQSA 287 (422)
Q Consensus 277 ~~~~~~l~~~~ 287 (422)
+.+..+.++..
T Consensus 221 ~~~~~g~s~~~ 231 (377)
T PRK11102 221 YIELNGVSPQN 231 (377)
T ss_pred HHHHhCCCHHH
Confidence 77766766544
No 61
>PRK03699 putative transporter; Provisional
Probab=99.69 E-value=3.9e-14 Score=141.36 Aligned_cols=219 Identities=11% Similarity=0.002 Sum_probs=134.8
Q ss_pred HHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCc
Q 014600 41 ACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTS 120 (422)
Q Consensus 41 ~~~~~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~ 120 (422)
......++....+.|+|..++|.+.+...+...+..++.|+++||+||||. +..+.+..+++..++.. .+
T Consensus 24 ~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~-~~~~~~~~~i~~~l~~~-------~~-- 93 (394)
T PRK03699 24 IVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQ-LIFGFALMILAVAGLMF-------SH-- 93 (394)
T ss_pred HHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHH-HHHHHHHHHHHHHHHHH-------cc--
Confidence 344455566555559999999999999999999999999999999999987 45666666666544321 11
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchHH
Q 014600 121 TLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLEN 200 (422)
Q Consensus 121 ~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~~~~~ 200 (422)
+.+ .+.+...+.+++.+.......+++.+..+ +++|++..+..+....+|+.+++.+...++.. ..
T Consensus 94 ~~~----~~~~~~~l~G~~~g~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~---------~~ 159 (394)
T PRK03699 94 SLA----LFSIAMFVLGVVSGITMSIGTFLITHVYE-GKQRGSRLLFTDSFFSMAGMIFPIIAAYLLAR---------SI 159 (394)
T ss_pred hHH----HHHHHHHHHHHhhHhhccchhHHhhhhcc-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---------cc
Confidence 111 12222345666666666667788888875 56888888777666677766666554433321 23
Q ss_pred HHHHHHHHHHHHHHHHHhhhhccccCcccccccCCCcchhhhHHHHHHhHHHHHHHHHHHHHHHHHHhhhHHHHHHhhhc
Q 014600 201 QYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVIND 280 (422)
Q Consensus 201 ~~~~~~~i~~~i~~i~~~i~~~~~~E~~~~~~~~~~~~~~~~~~~~~~n~~f~~~~~~~~~~~~~~~~~~~y~~~y~~~~ 280 (422)
+||+.+.+.+++.++..++.++ .+.++.+++++++ + ++..+. ..+++++...+..++..........|.|.|..+.
T Consensus 160 gw~~~f~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~-~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~ 235 (394)
T PRK03699 160 EWYWVYACIGLVYVAIFILTLF-SEFPALGKHAPKA-D-KPVAKE-KWGIGVLFLAIAALLYILAQLTFISWVPEYAQKK 235 (394)
T ss_pred cHHHHHHHHHHHHHHHHHHHHh-cCCccccccCccc-c-Cccccc-cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7888888777666554443332 2211111111100 0 111111 1245555555555555555567788999999888
Q ss_pred cCccchh
Q 014600 281 LRMGQSA 287 (422)
Q Consensus 281 ~~l~~~~ 287 (422)
.+++...
T Consensus 236 ~g~s~~~ 242 (394)
T PRK03699 236 FGMSLED 242 (394)
T ss_pred cCCChHH
Confidence 7776543
No 62
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.69 E-value=2.2e-14 Score=142.56 Aligned_cols=230 Identities=12% Similarity=-0.015 Sum_probs=142.9
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcC
Q 014600 31 SGHMLNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGG 110 (422)
Q Consensus 31 ~g~~~~~~~~~~~~~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~ 110 (422)
.+.+.....+.+..+|+|.|++|.|.|..++|++.++..+...+..|++|.++||+|||+...........+....+..
T Consensus 11 ~~~~~~~~~~~~~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~~~~~- 89 (382)
T TIGR00902 11 LGFFGYFCAYGIFLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAAAFSA- 89 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHH-
Confidence 3445555666778899999998889999999999999999999999999999999998654322222222111111110
Q ss_pred ccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 014600 111 CMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVS 190 (422)
Q Consensus 111 ~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~ 190 (422)
.+ .+.+. .++...+.+.+++.......++..+. ++||++..+.......+|.++++.+++.+.+.
T Consensus 90 -----~~--~~~~~----l~~~~~l~~~~~~~~~p~~~al~~~~---~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~- 154 (382)
T TIGR00902 90 -----GA--HNAWL----LFIAIGLFALFFSAGMPIGDALANTW---QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGM- 154 (382)
T ss_pred -----hh--hhHHH----HHHHHHHHHHHHccchhHHHHHHHHH---HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 01 11221 11222345666665555555665442 45677777777777788888877666555542
Q ss_pred cCCCCCchHHHHHHHHHHHHHHHHHHHhhhhccccCcccccc-cCCCcchhhhHHHHHHhHHHHHHHHHHHHHHHHHHhh
Q 014600 191 TAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMG-LRGNSHARISWAYWFKKILYYQVALVYMLTRLVVNVS 269 (422)
Q Consensus 191 ~~~g~~~~~~~~~~~~~i~~~i~~i~~~i~~~~~~E~~~~~~-~~~~~~~~~~~~~~~~n~~f~~~~~~~~~~~~~~~~~ 269 (422)
.+|+..+.+...+..+ .++.+...++.+.+++ ++++.+..+.+++++|||+++.+.+..++.+.+....
T Consensus 155 ---------~g~~~~f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~l~~~~~~~~ 224 (382)
T TIGR00902 155 ---------FDEQNILAILTAGLAF-MLIGFLIKPTIPPKDAIPEDESQGDSAFIALLKNPMNLRFLAAVCLIQGAHAAY 224 (382)
T ss_pred ---------cChhHHHHHHHHHHHH-HHHHHHcCCCCCCCccccccccccchhHHHHHcChHHHHHHHHHHHHHHHHHHH
Confidence 3677766655443222 2222332232111111 1111122345678999999988887777777778788
Q ss_pred hHHHHHHhhhccCccchh
Q 014600 270 QAYLAFYVINDLRMGQSA 287 (422)
Q Consensus 270 ~~y~~~y~~~~~~l~~~~ 287 (422)
.++.+.|+++ .|.+...
T Consensus 225 ~~~~~~~l~~-~g~s~~~ 241 (382)
T TIGR00902 225 YGFSAIYWQA-AGISASA 241 (382)
T ss_pred HHHHHHHHHH-CCCCHhH
Confidence 8899999976 6776644
No 63
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.69 E-value=4.4e-14 Score=140.31 Aligned_cols=226 Identities=15% Similarity=0.080 Sum_probs=141.5
Q ss_pred eeeeccchhHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHH
Q 014600 27 LYYGSGHMLNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSS 106 (422)
Q Consensus 27 ~~y~~g~~~~~~~~~~~~~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~ 106 (422)
.....+.+...+......+++|.|..+.|.|..++|++.+...+...+..|+.|+++||+||||.+ ..+.+..+++...
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~-~~~~~~~~~~~~~ 87 (381)
T PRK03633 9 LLLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSY-YLASLIFAAGCAG 87 (381)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 334456667777778888999999998899999999999999999999999999999999999985 4567777666544
Q ss_pred hhcCccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 014600 107 VFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIV 186 (422)
Q Consensus 107 lf~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l 186 (422)
... .+ +.+ .+.+..++.+++.+...++..+...+..+ +++|++..+..+...++|..+++.++..+
T Consensus 88 ~~~-------~~--~~~----~l~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~g~~~~~~l 153 (381)
T PRK03633 88 LGL-------MV--GFW----SWLAWRFVAGIGCAMIWVVVESALMCSGT-SRNRGRLLAAYMMVYYLGTVLGQLLVSKV 153 (381)
T ss_pred HHH-------hc--cHH----HHHHHHHHHHHHHHHHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 321 11 122 12223356777777766666666667665 56899999988888888888777665444
Q ss_pred HhhccCCCCCchHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccCCCcchhhhHHHHHHhHHHHHHHHHHHHHHHHH
Q 014600 187 FSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKKILYYQVALVYMLTRLVV 266 (422)
Q Consensus 187 ~~~~~~~g~~~~~~~~~~~~~i~~~i~~i~~~i~~~~~~E~~~~~~~~~~~~~~~~~~~~~~n~~f~~~~~~~~~~~~~~ 266 (422)
..... +...|..... ......+.+...+|+ +++ ++ ..++.++.+|||.++......++.....
T Consensus 154 ~~~~~------~~~~~~~~~~-----~~~~~~~~~~~~~~~--~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (381)
T PRK03633 154 STELM------SVLPWVTGLV-----LAAILPLLFTRILNQ--QAE-NH---DSTSIWPMLKLRQARLGVNGCIISGIVL 216 (381)
T ss_pred ccccc------chHHHHHHHH-----HHHHHHHHHhcccCC--CCC-CC---CCCCHHHHHHhcchHHHHHHHHHHHHHH
Confidence 32110 1123332111 111111112122221 111 11 1234567789998775443333333444
Q ss_pred HhhhHHHHHHhhhccCccc
Q 014600 267 NVSQAYLAFYVINDLRMGQ 285 (422)
Q Consensus 267 ~~~~~y~~~y~~~~~~l~~ 285 (422)
.....++|.|..+. +.+.
T Consensus 217 ~~~~~~lp~~~~~~-g~s~ 234 (381)
T PRK03633 217 GSLYGLMPLYLNHQ-GMSD 234 (381)
T ss_pred HHHHHHHHHHHHHc-CCCH
Confidence 55667888888764 5544
No 64
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.69 E-value=1.3e-13 Score=139.25 Aligned_cols=228 Identities=10% Similarity=0.079 Sum_probs=142.4
Q ss_pred HHHHHHHHHHh-C---CChh---HHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccc
Q 014600 44 FTYLLLFLTDI-G---LSPR---GAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRI 116 (422)
Q Consensus 44 ~~~l~~f~t~~-g---ls~~---~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~ 116 (422)
.+++..++.+. + .+.. +.+.++...-+...+..++.|+++||+||||. +..+....+++..+... .|
T Consensus 41 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~-l~~~~~~~~~~~~~~~~--~~--- 114 (432)
T PRK10406 41 YSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKS-MLISVCMMCFGSLVIAC--LP--- 114 (432)
T ss_pred HHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHH-HHHHHHHHHHHHHHHhh--cC---
Confidence 34555555554 3 4444 34555666666666899999999999999998 55677777776655321 12
Q ss_pred cCCccc--hhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCC
Q 014600 117 LSTSTL--KVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKT 194 (422)
Q Consensus 117 ~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g 194 (422)
+... .+....+++.+++.+++.+.......++++|..+ +++|++..+....+...|.+++..+...+...+.+.
T Consensus 115 --~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p-~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~- 190 (432)
T PRK10406 115 --GYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAV-EGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDA- 190 (432)
T ss_pred --CchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCC-CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHH-
Confidence 1111 1112234445567888888777788899999986 688999988888777777777665543332222100
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccCCCcchhhhHHHHHHhHHHHHHHHHHHH-HHHHHHhhhHHH
Q 014600 195 HADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKKILYYQVALVYML-TRLVVNVSQAYL 273 (422)
Q Consensus 195 ~~~~~~~~~~~~~i~~~i~~i~~~i~~~~~~E~~~~~~~~~~~~~~~~~~~~~~n~~f~~~~~~~~~-~~~~~~~~~~y~ 273 (422)
.-...+||+.+.+.++++++..+ .....+|.+.++++ +.+.+.++++++|||+++.......+ .........+|+
T Consensus 191 -~~~~~gWr~~F~i~~~~~ll~~~-~~~~~~e~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l 266 (432)
T PRK10406 191 -ELREWGWRIPFALGAVLAVVALW-LRRQLDETSQQETR--ALKEAGSLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTYM 266 (432)
T ss_pred -HHhccchHHHHHHHHHHHHHHHH-HHhcCCCCchHHHh--hhcccccHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00135899999887776665432 23445664332211 11123357888999987665544443 355566778899
Q ss_pred HHHhhhccCccc
Q 014600 274 AFYVINDLRMGQ 285 (422)
Q Consensus 274 ~~y~~~~~~l~~ 285 (422)
|.|+.+..+.+.
T Consensus 267 p~~l~~~~g~s~ 278 (432)
T PRK10406 267 QKYLVNTAGMHA 278 (432)
T ss_pred HHHHHHhcCCCH
Confidence 999988777654
No 65
>PRK10133 L-fucose transporter; Provisional
Probab=99.68 E-value=1.5e-13 Score=139.28 Aligned_cols=273 Identities=12% Similarity=-0.009 Sum_probs=162.3
Q ss_pred ccccccccCCCCCCCCCCCCceeeeeeeccchhHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhh
Q 014600 3 SSTVMNYDIENDDSFTQPVGRWSVLYYGSGHMLNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGEL 82 (422)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~l~~~~~~~y~~g~~~~~~~~~~~~~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~l 82 (422)
|-..-++|.-++|...++-..........-.+...+.......++|.+..+.|+++.+.|++.+...+..++..|+.|++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l 84 (438)
T PRK10133 5 SIQTQSYRAVDKDAGQSRSYIIPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGIL 84 (438)
T ss_pred ccchhhhhccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344566666554232222222222333334445555555566676644459999999999999999999999999999
Q ss_pred hcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchh
Q 014600 83 IDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRV 162 (422)
Q Consensus 83 sDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~ 162 (422)
+||+||||. +..+..+.+++..+.. |...++ +. ..+++...+.+++.+..+++.++++.+.. ++++|.
T Consensus 85 ~dr~G~r~~-l~~g~~~~~~~~~l~~----~~~~a~--~~----~~ll~~r~l~G~g~g~~~~~~~~~v~~~~-~~~~~~ 152 (438)
T PRK10133 85 MKKLSYKAG-IITGLFLYALGAALFW----PAAEIM--NY----TLFLVGLFIIAAGLGCLETAANPFVTVLG-PESSGH 152 (438)
T ss_pred HHHhCcHHH-HHHHHHHHHHHHHHHH----HHHhcC--CH----HHHHHHHHHHHHHHHHHHhhHHHHHHHhC-ChhhHH
Confidence 999999988 6678888887765431 100111 11 12233345788889999999999998874 456676
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhc-cC--------CCCC---chH----HHHHHHHHHHH-HHHHHHHhhhhcccc
Q 014600 163 VLTSCRNAFTMVANLSLYAIAFIVFSVS-TA--------KTHA---DLE----NQYRWIAYSSI-FIGCCFVGIFLSRTE 225 (422)
Q Consensus 163 ~l~~~~~~~~~ig~~l~~~~~~~l~~~~-~~--------~g~~---~~~----~~~~~~~~i~~-~i~~i~~~i~~~~~~ 225 (422)
+..+..+....+|..+++.++.++.... +. ...+ .++ .+|++.+.... +..++..++.+...|
T Consensus 153 ~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~~~~~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p 232 (438)
T PRK10133 153 FRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMTPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFP 232 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 6677777788888888887776654211 00 0000 011 24555554322 333333333333344
Q ss_pred CcccccccC-CCcchhhhHHHHHHhHHHHHHHHHHHHHHHHHHhhhHHHHHHh-hhccCccchh
Q 014600 226 EPRLKMGLR-GNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYV-INDLRMGQSA 287 (422)
Q Consensus 226 E~~~~~~~~-~~~~~~~~~~~~~~n~~f~~~~~~~~~~~~~~~~~~~y~~~y~-~~~~~l~~~~ 287 (422)
|.+.+++++ ++.+..+..++++|||.++...+..++..........|.+.|+ ++..++++..
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ 296 (438)
T PRK10133 233 ALQSDNHSDAKQGSFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGF 296 (438)
T ss_pred CCCccccccccccchhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHH
Confidence 432211111 1122345567889999987655555555555556677888886 4556777654
No 66
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.68 E-value=4e-14 Score=140.74 Aligned_cols=227 Identities=10% Similarity=-0.000 Sum_probs=140.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCcc
Q 014600 33 HMLNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCM 112 (422)
Q Consensus 33 ~~~~~~~~~~~~~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~ 112 (422)
.++.....++..++++.|++|.|.|+.++|++.++..+...+..|+.|.++||+|||+.......+...+...++..
T Consensus 13 ~~~~~~~~g~~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~--- 89 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLFAVAFWF--- 89 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHH---
Confidence 44455666778889999999889999999999999999999999999999999999533221111111111111111
Q ss_pred CccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 014600 113 PCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTA 192 (422)
Q Consensus 113 p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~ 192 (422)
. ..+.+ . .++...+.+.+.+.......++..+. .++|++..+.....+.+|..+++.+++.+.+.
T Consensus 90 ----~-~~~~~-~---l~i~~~l~g~~~~~~~~~~~a~~~~~---~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~--- 154 (382)
T PRK11128 90 ----G-AHSFW-L---LFVAIGLFNLFFSPLVPLTDALANTW---QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSW--- 154 (382)
T ss_pred ----h-cccHH-H---HHHHHHHHHHHHcccccHHHHHHHHH---HhhccCCcchHHHHHHHHHHHHHHHHHHHHHH---
Confidence 0 11122 1 11223345666666655566676665 34577767767777778888777766655442
Q ss_pred CCCCchHHHHHHHHHHHHHHHHHHHhhhhccccCccccccc-CCCcchhhhHHHHHHhHHHHHHHHHHHHHHHHHHhhhH
Q 014600 193 KTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGL-RGNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQA 271 (422)
Q Consensus 193 ~g~~~~~~~~~~~~~i~~~i~~i~~~i~~~~~~E~~~~~~~-~~~~~~~~~~~~~~~n~~f~~~~~~~~~~~~~~~~~~~ 271 (422)
.+|+..+++.++..++.. ++.+..||++.++++ +++++..+.+++++|||+++......++.+.......+
T Consensus 155 -------~g~~~~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~ 226 (382)
T PRK11128 155 -------FGEQAILWILTAGVASML-LGQLLRPTIMPQGESRQQESAGWPAWKALLKEPTVWRFLLCVSLLQGSHAAYYG 226 (382)
T ss_pred -------cChhHHHHHHHHHHHHHH-HHHHccCCCCCccccccccccccchHHHHHcChhHHHHHHHHHHHHHHhHhHHH
Confidence 367776665554333332 233344553222111 11112245678999999998877766666666666778
Q ss_pred HHHHHhhhccCccch
Q 014600 272 YLAFYVINDLRMGQS 286 (422)
Q Consensus 272 y~~~y~~~~~~l~~~ 286 (422)
+.+.|..+ .+.+..
T Consensus 227 ~~~~~~~~-~g~s~~ 240 (382)
T PRK11128 227 FSAIYWQA-AGYSAS 240 (382)
T ss_pred HHHHHHHH-CCCCHh
Confidence 88888865 566543
No 67
>TIGR00895 2A0115 benzoate transport.
Probab=99.68 E-value=2.5e-15 Score=148.72 Aligned_cols=163 Identities=14% Similarity=0.067 Sum_probs=113.7
Q ss_pred HHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCC
Q 014600 40 AACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILST 119 (422)
Q Consensus 40 ~~~~~~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~ 119 (422)
......+.+.+.++.|.++.++|++.++..+...+..|+.|+++||+||||. +..+.++.+++..++.. .+
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~-~~~~~~~~~~~~~~~~~-------~~- 103 (398)
T TIGR00895 33 LAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRV-LLWSILLFSVFTLLCAL-------AT- 103 (398)
T ss_pred HHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHH-HHHHHHHHHHHHHHHHH-------cc-
Confidence 3334444455555559999999999999999999999999999999998876 55676666666554432 11
Q ss_pred ccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchH
Q 014600 120 STLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLE 199 (422)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~~~~ 199 (422)
+.+ .+.+...+.+++.+....+..++..|..+ +++|++..++......+|..+++.+.+.+.+.
T Consensus 104 -~~~----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~---------- 167 (398)
T TIGR00895 104 -NVT----QLLILRFLAGLGLGGLMPNLNALVSEYAP-KRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPV---------- 167 (398)
T ss_pred -chH----HHHHHHHHHhcccccchhhHHHHHHHHcC-HHhhchhHhhHhhHHHHHHHHHHHHHHHHhhc----------
Confidence 111 12222346777778888888999999876 57899999998888888888887666554432
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhccccCc
Q 014600 200 NQYRWIAYSSIFIGCCFVGIFLSRTEEP 227 (422)
Q Consensus 200 ~~~~~~~~i~~~i~~i~~~i~~~~~~E~ 227 (422)
.+|++.+.+.+++..+..++.+...||+
T Consensus 168 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (398)
T TIGR00895 168 FGWRSLFYVGGIAPLLLLLLLMRFLPES 195 (398)
T ss_pred ccceeehhhhhhHHHHHHHHHHHhCCCC
Confidence 3667666666555555555555555654
No 68
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.67 E-value=1.9e-14 Score=146.55 Aligned_cols=285 Identities=12% Similarity=0.003 Sum_probs=173.1
Q ss_pred HHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCccchh
Q 014600 45 TYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKV 124 (422)
Q Consensus 45 ~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~~~ 124 (422)
.+++.+..+.|.+..+++++.....+...+..|+.|+++||+||||. ++.+.+..+++.+++- +.+ +.+
T Consensus 40 ~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~-l~~~~~~~~~~~~~~~-------~~~--~~~- 108 (455)
T TIGR00892 40 VFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPV-VIAGGLLASLGMILAS-------FSS--NVI- 108 (455)
T ss_pred hhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHH-HHhhHHHHHHHHHHHH-------Hhh--hHH-
Confidence 34555555559999999999999999999999999999999999886 5566666666554431 111 111
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchHHHHHH
Q 014600 125 ETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRW 204 (422)
Q Consensus 125 ~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~~~~~~~~~ 204 (422)
. .+....++.+++.+....|..+++.++. +++|++..++.+.+..+|..+++.+.+.+.+ ..+|++
T Consensus 109 ~--l~~~~~~l~G~~~~~~~~~~~~~~~~~~--~~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~----------~~gwr~ 174 (455)
T TIGR00892 109 E--LYLTAGFITGLGLAFNFQPSLTMLGKYF--YRRRPLANGLAMAGSPVFLSTLAPLNQYLFE----------SFGWRG 174 (455)
T ss_pred H--HHHHHHHHHHhcchhhhhHHHHHHHHHH--HhhHHHHHHHHHhcccHHHHHHHHHHHHHHH----------HhChHH
Confidence 1 1111123456666655566677788876 4789999999888888888776655444432 347999
Q ss_pred HHHHHHHHHHHHHhhhhccccCccc----ccc--c--C-C-C--c----chhh---hH--HHHHHhHHHHHHHHHHHHHH
Q 014600 205 IAYSSIFIGCCFVGIFLSRTEEPRL----KMG--L--R-G-N--S----HARI---SW--AYWFKKILYYQVALVYMLTR 263 (422)
Q Consensus 205 ~~~i~~~i~~i~~~i~~~~~~E~~~----~~~--~--~-~-~--~----~~~~---~~--~~~~~n~~f~~~~~~~~~~~ 263 (422)
.+.+.+++.+++.+..++..++++. +++ + + + + . +..+ .+ .+++|+|.++..+...++..
T Consensus 175 ~f~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 254 (455)
T TIGR00892 175 SFLILGGLLLHCCVCGALMRPVGPSQRVSKSKSKEGLPPDGSTKKLSKKSTAEKINRFLDFSLFTHRGFLVYLSGNVIMF 254 (455)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCcccccccccccccCCCCCccccccccchhhhhhhhcchHHhcCchHHHHHHHHHHHH
Confidence 9888887766554444433332111 000 0 0 0 0 0 0000 11 14678888877666666666
Q ss_pred HHHHhhhHHHHHHhhhccCccchhHh---------HH---HHHHH-------------HH--HHHH---HH-HHH-----
Q 014600 264 LVVNVSQAYLAFYVINDLRMGQSAKA---------LV---PAIIY-------------IC--SFIV---SI-LLQ----- 307 (422)
Q Consensus 264 ~~~~~~~~y~~~y~~~~~~l~~~~~~---------~i---P~~~~-------------~~--~~~~---~~-~~~----- 307 (422)
.+......|++.|..+ .+++....+ .+ |...+ .. +... .. +..
T Consensus 255 ~~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~ 333 (455)
T TIGR00892 255 LGFFAPIIFLVPYAKD-KGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDY 333 (455)
T ss_pred HHccchHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchH
Confidence 6666667788988865 466543311 00 00000 00 0000 00 000
Q ss_pred --------HHH----------hhhhhhhhcCccccccceehhhHHHHHHHHHHHHHHHHHhHhhCC-Cc
Q 014600 308 --------VTG----------ISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSYQSMSP-TV 357 (422)
Q Consensus 308 --------v~~----------~~~~~~~~g~r~~g~~~~~s~~~~~~K~~~a~~~~i~g~~l~~~G-y~ 357 (422)
+.+ ..+..+..++++.|. .+|..+....+|+.+|+.+.|.+.+..| |+
T Consensus 334 ~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~--~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~ 400 (455)
T TIGR00892 334 TGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSS--AVGLVTIVECCAVLIGPPLAGRLVDATKNYK 400 (455)
T ss_pred HHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhh--HHhHHHHHHHHHHHccccceeeeehhcCCcc
Confidence 001 122334556667777 8999999999999999999999888764 54
No 69
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.67 E-value=5.4e-14 Score=136.37 Aligned_cols=274 Identities=16% Similarity=0.161 Sum_probs=185.7
Q ss_pred cchhHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCc
Q 014600 32 GHMLNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGC 111 (422)
Q Consensus 32 g~~~~~~~~~~~~~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~ 111 (422)
..+...........+.+.+..+.|.++.+.+.+..+..+...+.+|+.|+++||+||||. +..+.+...++...+..
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~-~~~~~~~~~~~~~~~~~-- 83 (352)
T cd06174 7 GFFLSGLDRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRV-LLLGLLLFALGSLLLAF-- 83 (352)
T ss_pred HHHHHHHhhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchh-hHHHHHHHHHHHHHHHH--
Confidence 345556666667777888887779999999999999999999999999999999999986 66788888777665442
Q ss_pred cCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 014600 112 MPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVST 191 (422)
Q Consensus 112 ~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~ 191 (422)
.+ +.+ .+.+...+.+++.+....+..++.+|+.+ +|||++..++......+|..+++.+...+.+.
T Consensus 84 -----~~--~~~----~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-- 149 (352)
T cd06174 84 -----AS--SLW----LLLVGRFLLGLGGGALYPAAAALIAEWFP-PKERGRALGLFSAGFGLGALLGPLLGGLLAES-- 149 (352)
T ss_pred -----hc--cHH----HHHHHHHHHHcccccccHhHHHHHHHhCC-ccchhhhhhHHHHHHHHHHHHHHHHHHHHHHH--
Confidence 11 111 22233356778888888999999999987 47999999999999999999988777666542
Q ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccCCCcchhhhHHHHHHhHHHHHHHHHHHHHHHHHHhhhH
Q 014600 192 AKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQA 271 (422)
Q Consensus 192 ~~g~~~~~~~~~~~~~i~~~i~~i~~~i~~~~~~E~~~~~~~~~~~~~~~~~~~~~~n~~f~~~~~~~~~~~~~~~~~~~ 271 (422)
.+|++.+.+.+++.++..++..+. + |.++......++..........
T Consensus 150 --------~~~~~~~~~~~~~~~~~~~~~~~~-~------------------------~~~~~~~~~~~~~~~~~~~~~~ 196 (352)
T cd06174 150 --------LGWRWLFLILAILGLLLALLLLFL-L------------------------RLLLLLALAFFLLSFGYYGLLT 196 (352)
T ss_pred --------hhHHHHHHHHHHHHHHHHHHHHHH-H------------------------HHHHHHHHHHHHHHhHHHHHHH
Confidence 357777776666655554443322 1 4455555555555566666677
Q ss_pred HHHHHhhhccCccchhHhHH------------HH-----------H-HHHHHHHHHHHH-------H----------HH-
Q 014600 272 YLAFYVINDLRMGQSAKALV------------PA-----------I-IYICSFIVSILL-------Q----------VT- 309 (422)
Q Consensus 272 y~~~y~~~~~~l~~~~~~~i------------P~-----------~-~~~~~~~~~~~~-------~----------v~- 309 (422)
+.+.|..+..+.+....... +. . ....+....... . +.
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g 276 (352)
T cd06174 197 YLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPSLALLLVALLLLG 276 (352)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 77777776545444321100 00 0 001111100000 0 00
Q ss_pred ---------HhhhhhhhhcCccccccceehhhHHHHHHHHHHHHHHHHHhHhhCCCc
Q 014600 310 ---------GISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSYQSMSPTV 357 (422)
Q Consensus 310 ---------~~~~~~~~~g~r~~g~~~~~s~~~~~~K~~~a~~~~i~g~~l~~~Gy~ 357 (422)
...+..+..+++++|. .+|..+..+++++.+++.+.+.+.+..||+
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~ 331 (352)
T cd06174 277 FGLGFAFPALLTLASELAPPEARGT--ASGLFNTFGSLGGALGPLLAGLLLDTGGYG 331 (352)
T ss_pred HHHhccchhHHHHHHhhcCHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcccCcc
Confidence 1223445566677888 999999999999999999999998765553
No 70
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.64 E-value=6e-14 Score=143.64 Aligned_cols=230 Identities=10% Similarity=0.024 Sum_probs=145.6
Q ss_pred HHHHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCccc
Q 014600 43 WFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTL 122 (422)
Q Consensus 43 ~~~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~ 122 (422)
+..+++.+..+.|++..+.|++.++..+...+..|+.|+++||+|||+. +..+.+..+++..+.-. .+ +.
T Consensus 55 ~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~-~~~~~~~~~~~~~~~~~-------~~--s~ 124 (476)
T PLN00028 55 AAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYG-SAFLLMLTAPAVFCMSL-------VS--SA 124 (476)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHH-HHHHHHHHHHHHHHHHH-------hc--CH
Confidence 3344555555569999999999888888899999999999999999987 45666666666543221 11 11
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchHHHH
Q 014600 123 KVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQY 202 (422)
Q Consensus 123 ~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~~~~~~~ 202 (422)
. .+.+..++.+++.+.. .+...+++++.+ +++|++..++.+...++|..++..+.+.+...+...+ .+...+|
T Consensus 125 ~----~l~~~r~l~G~~~~~~-~~~~~~i~~~~~-~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~-~~~~~gW 197 (476)
T PLN00028 125 T----GFIAVRFFIGFSLATF-VSCQYWMSTMFN-GKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAG-APSFTAW 197 (476)
T ss_pred H----HHHHHHHHHHHHHHhh-HHHHHHHHHhcC-hhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-Ccchhhh
Confidence 1 1112233456555543 344556788875 6789999999887777777777665533333221110 1123589
Q ss_pred HHHHHHHHHHHHHHHhhhhccccCccccc---cc-C---CCcchhhhHHHHHHhHHHHHHHHHHHHHHHHHHhhhHHHHH
Q 014600 203 RWIAYSSIFIGCCFVGIFLSRTEEPRLKM---GL-R---GNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAF 275 (422)
Q Consensus 203 ~~~~~i~~~i~~i~~~i~~~~~~E~~~~~---~~-~---~~~~~~~~~~~~~~n~~f~~~~~~~~~~~~~~~~~~~y~~~ 275 (422)
|+.+.+.++++++..++.++..++++..+ .+ + ++.+..+.+++.+++++++.+.+.+.+..........+.|.
T Consensus 198 r~~f~i~g~l~l~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 277 (476)
T PLN00028 198 RIAFFVPGLLHIIMGILVLTLGQDLPDGNYRELKKSGTMPKDSFSKVLRYGVTNYRTWILALTYGYSFGVELTMDNIIAE 277 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCcCCCCchhhHHhcCccccccHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHhHHHH
Confidence 99999888887776666555544433211 00 1 11122345677788888777666665554444556778899
Q ss_pred HhhhccCccchhHh
Q 014600 276 YVINDLRMGQSAKA 289 (422)
Q Consensus 276 y~~~~~~l~~~~~~ 289 (422)
|+.+..+++.....
T Consensus 278 ~l~~~~g~s~~~a~ 291 (476)
T PLN00028 278 YFYDRFGLSLETAG 291 (476)
T ss_pred HHHHhcCCCHHHHH
Confidence 98877777665443
No 71
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.63 E-value=1.7e-13 Score=134.60 Aligned_cols=213 Identities=15% Similarity=0.057 Sum_probs=137.7
Q ss_pred HHHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCccch
Q 014600 44 FTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLK 123 (422)
Q Consensus 44 ~~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~~ 123 (422)
.+.+|.+.+|.|++..++|++.++..+...+..|+.|+++||+||||. +..+.+..+++...... | +.+
T Consensus 20 ~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~-~~~~~~~~~~~~~~~~~---~-------~~~ 88 (355)
T TIGR00896 20 GPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERS-VAAGLLLIAAGILIRSA---P-------GTA 88 (355)
T ss_pred cccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHH-HHHHHHHHHHHHHHHHh---c-------cHH
Confidence 456667666679999999999999999999999999999999999988 55666666665543321 1 111
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchHHHHH
Q 014600 124 VETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYR 203 (422)
Q Consensus 124 ~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~~~~~~~~ 203 (422)
.+++.+.+.+++.+.......++..+.. +++|++..+..+...++|..+++.+..++.+.. ..+|+
T Consensus 89 ----~l~~~~~~~g~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~--------~~~w~ 154 (355)
T TIGR00896 89 ----LLFAGTALIGVGIAIINVLLPSLIKRDF--PQRVGLMTGLYSMALMGGAALAAAATVPLAQHS--------GGHWQ 154 (355)
T ss_pred ----HHHHHHHHHHHHHHHHhccchHHHHHhC--cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh--------hhhHH
Confidence 1122334566666666666666777765 358999999988888888888877766665421 12488
Q ss_pred HHHHHHHHHHHHHHhhhhccccCcccccccCCCcchhhhHHHHHHhHHHHHHHHHHHHHHHHHHhhhHHHHHHhhhccCc
Q 014600 204 WIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRM 283 (422)
Q Consensus 204 ~~~~i~~~i~~i~~~i~~~~~~E~~~~~~~~~~~~~~~~~~~~~~n~~f~~~~~~~~~~~~~~~~~~~y~~~y~~~~~~l 283 (422)
+.+.+.+++.++.... ..+|++.+++++ +.+.++..++++|||.++...+.+.+..........|.|.|..+ .+.
T Consensus 155 ~~f~~~~~~~~~~~~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~ 229 (355)
T TIGR00896 155 QALAWWALPALLALLA---WIPQVRRRVAAN-QTTTRLTPVRIWRSPLAWQVTVFFGLQSGLYYSLIGWLPAILIS-HGA 229 (355)
T ss_pred HHHHHHHHHHHHHHHH---HhhhhccccCCC-CCCCCCCCchhhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCC
Confidence 7766555444333222 223322211111 11112334677899988766555555555566677889999876 466
Q ss_pred cch
Q 014600 284 GQS 286 (422)
Q Consensus 284 ~~~ 286 (422)
+..
T Consensus 230 ~~~ 232 (355)
T TIGR00896 230 SAA 232 (355)
T ss_pred CHH
Confidence 543
No 72
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.63 E-value=2.7e-13 Score=152.96 Aligned_cols=251 Identities=12% Similarity=-0.044 Sum_probs=149.4
Q ss_pred ceeeeeeeccchhHHHHHHHHHHHHHHHHHH-hCC--ChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHH
Q 014600 23 RWSVLYYGSGHMLNDITAACWFTYLLLFLTD-IGL--SPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVL 99 (422)
Q Consensus 23 ~~~~~~y~~g~~~~~~~~~~~~~~l~~f~t~-~gl--s~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~ 99 (422)
.+....+-+..+..++........+..+... .+. +....+++.++..+..++..|+.|+++||+||||.++ ++..+
T Consensus 8 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~-~~~~~ 86 (1146)
T PRK08633 8 IIGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIR-IVKLF 86 (1146)
T ss_pred hhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHH-HHHHH
Confidence 3344444455555554444433333333333 344 4556889999999999999999999999999998854 44443
Q ss_pred HHHHHHHhhcCccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHH
Q 014600 100 VAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSL 179 (422)
Q Consensus 100 ~~i~~~~lf~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~ 179 (422)
.++...+... . ... .+ . ..+++..++.+++.++...+..++++|+++ +++|+++.++...+..+|.+++
T Consensus 87 ~~~~~~~~~~---~-~~~--~~-~---~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~ig~~lg 155 (1146)
T PRK08633 87 EVGLTLLIVL---A-YYL--GW-F---WLAFAVTFLLGAQSAIYSPAKYGIIPELVG-KENLSRANGLLEAFTIVAILAG 155 (1146)
T ss_pred HHHHHHHHHH---H-HHH--cc-H---HHHHHHHHHHHHHHHhhchHHHhhhHHhcC-cccchhhhhHHHHHHHHHHHHH
Confidence 3333222111 0 001 11 1 122333456788888888899999999987 5789999999999999999999
Q ss_pred HHHHHHHHhhccCCCCCchHHHHHHHHHHHHHHHHHHHhhhhccccCccccccc---CC----CcchhhhHHHHHHhHHH
Q 014600 180 YAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGL---RG----NSHARISWAYWFKKILY 252 (422)
Q Consensus 180 ~~~~~~l~~~~~~~g~~~~~~~~~~~~~i~~~i~~i~~~i~~~~~~E~~~~~~~---~~----~~~~~~~~~~~~~n~~f 252 (422)
+.+++.+.......+ .+...++.+...+..+...+..++..+..+|.+.++.+ ++ .....+.++.+++||.+
T Consensus 156 ~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 234 (1146)
T PRK08633 156 TALFSFLFESVNGNT-PSEILGRIAPAGLVLLAVAVLGLIFAYRLPKVPAAAPEVFDKKKYLFPKLLWRNLKLLRSDRVL 234 (1146)
T ss_pred HHHHHHHHHhhcccc-ccccccchHHHHHHHHHHHHHHHHHHhcCcCCCCCCcccccccccccHHHHHHHHHHHhcCcHH
Confidence 888776665311000 00011233333332222222233333445664322111 11 11234557778899987
Q ss_pred HHHHHHHHHHHHHHHhhhHHHHHHhhhccCccch
Q 014600 253 YQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQS 286 (422)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~y~~~y~~~~~~l~~~ 286 (422)
+..++...+.+........++|.|+.+..+++..
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~ 268 (1146)
T PRK08633 235 WLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNT 268 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcH
Confidence 7766655555566666778899999888777655
No 73
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.62 E-value=3.1e-13 Score=136.08 Aligned_cols=289 Identities=9% Similarity=0.012 Sum_probs=158.6
Q ss_pred chhHHHHHHHHHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCc
Q 014600 33 HMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGC 111 (422)
Q Consensus 33 ~~~~~~~~~~~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~ 111 (422)
.+.....+.++.++++.|+++. |++..++|++.++..+...+.+|+.|+++||+||||+.+..+.+..++...+...
T Consensus 11 ~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~-- 88 (418)
T TIGR00889 11 SFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQ-- 88 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH--
Confidence 3445566778889999999987 9999999999999999999999999999999988777676666666555433221
Q ss_pred cCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhh----hh----hccCCccchhhHHHHHHHHHHHHHHHHHHHH
Q 014600 112 MPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSM----VN----CITLNSTSRVVLTSCRNAFTMVANLSLYAIA 183 (422)
Q Consensus 112 ~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al----~~----~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~ 183 (422)
.+ +.+..++. ..+.+++++.......++ .. |..+ +..|.+..+ .+|..+++.++
T Consensus 89 -----~~--~~~~~~~~----~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~-~~~~~r~~G------~lG~~ig~~l~ 150 (418)
T TIGR00889 89 -----VT--TPAGMFPV----LLANSLAYMPTIALTNSISYANLPQAGLDVVT-DFPPIRVMG------TIGFIAAMWAV 150 (418)
T ss_pred -----hc--CHHHHHHH----HHHHHHHHccHHHHHHHHHHHHHhhcCCCchh-cCCCeeeeh------hHHHHHHHHHH
Confidence 11 11111111 123444433222222222 22 2222 223433332 34555554444
Q ss_pred HHHHhhccCCCCCchHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccCCCcchh----hhHHHHHHhHHHHHHHHHH
Q 014600 184 FIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHAR----ISWAYWFKKILYYQVALVY 259 (422)
Q Consensus 184 ~~l~~~~~~~g~~~~~~~~~~~~~i~~~i~~i~~~i~~~~~~E~~~~~~~~~~~~~~----~~~~~~~~n~~f~~~~~~~ 259 (422)
+.+ .. ...|.+ +++.+++.++..++ .+.+||++.+++++ +.+.+ .+.+.++|||+++.+++..
T Consensus 151 g~l-~~---------~~~~~~-f~~~~~~~~~~~~~-~~~~~e~~~~~~~~-~~~~~~~~~~~~~~~~k~~~~~~~~~~~ 217 (418)
T TIGR00889 151 SLL-DI---------ELSNIQ-LYITAGSSALLGVF-ALTLPDIPVAKSTA-KMSIKVMLGLDAFILFKNKRMAIFFFFS 217 (418)
T ss_pred HHh-cc---------cchhHH-HHHHHHHHHHHHHH-HhcCCCCCCCcccc-ccCHHHHhhhhHHHHhcCCCeeeHHHHH
Confidence 322 11 112332 33444444444433 45667754222111 11111 2345688999887766666
Q ss_pred HHHHHHHHhhhHHHHHHhhhccCccc--------hhH---------hHHHH------HH--------HHHHHHH------
Q 014600 260 MLTRLVVNVSQAYLAFYVINDLRMGQ--------SAK---------ALVPA------II--------YICSFIV------ 302 (422)
Q Consensus 260 ~~~~~~~~~~~~y~~~y~~~~~~l~~--------~~~---------~~iP~------~~--------~~~~~~~------ 302 (422)
++..........|++.|..+. +.++ ... ..++. +. ...+.+.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~ 296 (418)
T TIGR00889 218 MLLGAPLQITNIFGNGFLHEF-GRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFG 296 (418)
T ss_pred HHHHhHHHHHHHhHHHHHHHh-cccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 665555555667778887653 2111 110 01111 00 0000000
Q ss_pred -H-H------------HHH-HHH----------hhhhhhhhcCccccccceehhhH-HHHHHHHHHHHHHHHHhHhhCCC
Q 014600 303 -S-I------------LLQ-VTG----------ISMQNVLVGEDLSGCAFVCGTLS-FLDKMSCGIAVYVLQSYQSMSPT 356 (422)
Q Consensus 303 -~-~------------~~~-v~~----------~~~~~~~~g~r~~g~~~~~s~~~-~~~K~~~a~~~~i~g~~l~~~Gy 356 (422)
. . +.. +.+ ..+..+..++++.|. .+|..+ ....+|..+|+.+.|++.+..|.
T Consensus 297 l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~--~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~ 374 (418)
T TIGR00889 297 FFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRAS--AQGLFTLMCNGFGSLLGYILSGVMVEKMFA 374 (418)
T ss_pred HHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH--HHHHHHHHHHhhHHHHHHHHHHHHHHHhcc
Confidence 0 0 000 001 112345667778888 899986 67889999999999999998774
Q ss_pred c
Q 014600 357 V 357 (422)
Q Consensus 357 ~ 357 (422)
+
T Consensus 375 ~ 375 (418)
T TIGR00889 375 Y 375 (418)
T ss_pred c
Confidence 3
No 74
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.62 E-value=4.2e-13 Score=130.26 Aligned_cols=320 Identities=11% Similarity=0.090 Sum_probs=197.2
Q ss_pred HhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccC-----CchhHHHHHHHHHHHHHHHhhcCccCccccC-----Cccc
Q 014600 53 DIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFG-----HFKIWHGAGSVLVAVSFSSVFGGCMPCRILS-----TSTL 122 (422)
Q Consensus 53 ~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~G-----rrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~-----~~~~ 122 (422)
|.++++..++.+..+..++ +...|.+|+.||+.+ ||.||+..|....+.+...+-.. . ..+.. +...
T Consensus 9 EL~vpA~lv~~lval~~~~-ap~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a-~-~~l~~~~~~~~~~~ 85 (403)
T PF03209_consen 9 ELGVPAWLVALLVALHYLV-APLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFA-L-LLLAESGQQSSGPF 85 (403)
T ss_pred HhccHHHHHHHHHHHHHHH-HHHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHH-H-HHHccccccccccc
Confidence 3489999999888887776 557999999999877 99999999988887765433110 0 00111 1112
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchHHHH
Q 014600 123 KVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQY 202 (422)
Q Consensus 123 ~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~~~~~~~ 202 (422)
+.....-.+...+++++.+...+|+.++..|.++ ||+|.++.++-..+..+|.+++..+.+.+++.+ +...-
T Consensus 86 ~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~-e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~-------s~~rL 157 (403)
T PF03209_consen 86 WLGLALAALAFLLYGLGVHASGTSFLALLADLAP-EERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPF-------SPERL 157 (403)
T ss_pred HHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCC-HhhhhhhHHHHHHHHHHHHHHHHHHHHHHcccc-------CHHHH
Confidence 2111122222246899999999999999999986 789999999988888888888777666655432 11222
Q ss_pred HHHHHHHHHHHHHHHhhhhccccCcccc---cccCCCcchhhhHHHHHHhHHHHHHHHHHHHHHHHHHhhhHHHHHHhhh
Q 014600 203 RWIAYSSIFIGCCFVGIFLSRTEEPRLK---MGLRGNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVIN 279 (422)
Q Consensus 203 ~~~~~i~~~i~~i~~~i~~~~~~E~~~~---~~~~~~~~~~~~~~~~~~n~~f~~~~~~~~~~~~~~~~~~~y~~~y~~~ 279 (422)
.......+++.++..++..+..+.|..+ .+++++.++++.++++.+||+-++++..-++..++.+.--..+=.|--+
T Consensus 158 ~~v~~~~a~i~~~l~~ia~wg~E~r~~~~~~~~~~~~~~f~~a~~~~~~~~~a~~f~~fl~l~t~a~~~QD~iLEPygg~ 237 (403)
T PF03209_consen 158 IQVIQGVALIALLLNLIALWGQEPRRSRRAAAAERPRPPFREAWRQVWASPQARRFFVFLFLGTLAFFMQDVILEPYGGE 237 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccCCcccccCCCCCCccHHHHHHHHHhCCChhHHHHHHHHHHHHHHhhHHHcCCchhH
Confidence 2222233344444444445554333222 1235566788999999999887665544444444443333444445555
Q ss_pred ccCccchhHh----------HHHHHH--------------HHHHHHHHH-------HHH-------------HH------
Q 014600 280 DLRMGQSAKA----------LVPAII--------------YICSFIVSI-------LLQ-------------VT------ 309 (422)
Q Consensus 280 ~~~l~~~~~~----------~iP~~~--------------~~~~~~~~~-------~~~-------------v~------ 309 (422)
..+++..... .+-+.. -..|+..+. +.. +.
T Consensus 238 Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~G~ 317 (403)
T PF03209_consen 238 VFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGLGNGL 317 (403)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhH
Confidence 6666554321 000000 011111110 000 01
Q ss_pred ----HhhhhhhhhcCccccccceehhhHHHHHHHHHHHHHHHHHhHhhCCCccCCCCcccccccccCCCccchHHHHHHH
Q 014600 310 ----GISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSYQSMSPTVLDNNSSITSLTVLDNNSLISTSYISVTR 385 (422)
Q Consensus 310 ----~~~~~~~~~g~r~~g~~~~~s~~~~~~K~~~a~~~~i~g~~l~~~Gy~~~~~~~~~~~~~~~~~~~q~~~~~~~i~ 385 (422)
..++.-+.+.+.++|+ +.|.|...|-++.++|..+.|.++|....-.+ . +...+..
T Consensus 318 f~vgals~mM~lt~~~~aG~--~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~---------------~---~~~~aY~ 377 (403)
T PF03209_consen 318 FTVGALSLMMDLTSAGRAGL--FMGAWGAAQAIARGLGTFLGGALRDLVRALFG---------------N---SPALAYG 377 (403)
T ss_pred HHHHHHHHHHhCCCCcchhH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---------------C---CcchHHH
Confidence 1333456777888999 99999999999999999999999997654321 0 1134666
Q ss_pred HHHhhHhHHHHHHHHHHHH
Q 014600 386 FGLGLIPAICSLVSVAVTF 404 (422)
Q Consensus 386 ~~~~~~P~i~~l~~~~~~~ 404 (422)
..|. +.+++++++++++.
T Consensus 378 ~VF~-lEa~ll~~a~~ll~ 395 (403)
T PF03209_consen 378 VVFA-LEAVLLLAALVLLG 395 (403)
T ss_pred HHHH-HHHHHHHHHHHHHH
Confidence 6665 57888888887764
No 75
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.62 E-value=6.1e-13 Score=132.64 Aligned_cols=229 Identities=14% Similarity=0.066 Sum_probs=129.1
Q ss_pred cchhHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCc
Q 014600 32 GHMLNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGC 111 (422)
Q Consensus 32 g~~~~~~~~~~~~~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~ 111 (422)
-.+..-..++...+|++.|+++.|+|+.++|.++++..+...++.|++|.++||++++|..+.+..+..++.+.+...
T Consensus 10 ~~f~~f~~~G~~~p~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~-- 87 (400)
T PF03825_consen 10 MYFLYFFAYGAFLPYLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAF-- 87 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHH--
Confidence 344555666778889999999999999999999999999999999999999999997777676655555554433221
Q ss_pred cCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHH-HHHHhhc
Q 014600 112 MPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIA-FIVFSVS 190 (422)
Q Consensus 112 ~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~-~~l~~~~ 190 (422)
. .+.++.+. +.+++.+.++....-..++.-+..+ ++|.+....|.. +.+|-+++.... ..+.+..
T Consensus 88 -----~--~~f~~~~~----~~~l~~~~~~p~~pl~dsi~~~~~~--~~~~~YG~iRlw-GSiGf~~~~~~~~~~~~~~~ 153 (400)
T PF03825_consen 88 -----S--SSFWWLFV----IMLLFSFFFSPTMPLSDSIALSYLG--DRGKDYGRIRLW-GSIGFIVAALAFGGLLGGYL 153 (400)
T ss_pred -----h--ccHHHHHH----HHHHHHHHHccHHHHHHHHHHHHcc--cccCCCCcchhh-hhHHHHHHHHHHHHHHHhhh
Confidence 1 12222211 1223444444333333444444332 334445555543 344444443221 1122211
Q ss_pred cCCCCCchHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccC--CCcchhhhHHHHHHhHHHHHHHHHHHHHHHHHHh
Q 014600 191 TAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLR--GNSHARISWAYWFKKILYYQVALVYMLTRLVVNV 268 (422)
Q Consensus 191 ~~~g~~~~~~~~~~~~~i~~~i~~i~~~i~~~~~~E~~~~~~~~--~~~~~~~~~~~~~~n~~f~~~~~~~~~~~~~~~~ 268 (422)
+ ..+..+..++.+...++....+ +..|+.+.+++++ .++....+..+++|||++..+++..++.+.....
T Consensus 154 ~-------~~~~~~~~~i~~~~~~ll~~~~-l~lp~~~~~~~~~~~~~~~~~~~~~~llk~~~~~~Fll~~~l~~~~~~~ 225 (400)
T PF03825_consen 154 G-------ISGTSLIFYIAAILSLLLAGFA-LFLPKTPPKRSAKESVKKLLGLDALKLLKNPRFLVFLLAAFLIGISHAA 225 (400)
T ss_pred c-------cccccHHHHHHHHHHHHHHHHH-HhCCCCccccccCCCcccccchHHHHHhcCccHHHHHHHHHHHHHHHHH
Confidence 1 0111223333333333322222 2234433211111 1112223335799999988877777777778888
Q ss_pred hhHHHHHHhhhccCcc
Q 014600 269 SQAYLAFYVINDLRMG 284 (422)
Q Consensus 269 ~~~y~~~y~~~~~~l~ 284 (422)
..+|.+.|+.+..+..
T Consensus 226 ~~~f~~~yl~~~gg~~ 241 (400)
T PF03825_consen 226 YYTFFSIYLQELGGYS 241 (400)
T ss_pred HHHHHHHHHHHcccch
Confidence 8899999988876443
No 76
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.62 E-value=2.1e-12 Score=132.70 Aligned_cols=242 Identities=12% Similarity=0.095 Sum_probs=143.1
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHh-C--CChh--HHHH--HHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHH
Q 014600 31 SGHMLNDITAACWFTYLLLFLTDI-G--LSPR--GAAA--VMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVS 103 (422)
Q Consensus 31 ~g~~~~~~~~~~~~~~l~~f~t~~-g--ls~~--~~g~--i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~ 103 (422)
+|.+.......+ ..+..++..+. + .++. .++. +.++..+..++..++.|+++||+||||. +..+.++++++
T Consensus 23 ~g~~~~~~d~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~-l~~~~~l~~i~ 100 (490)
T PRK10642 23 LGNAMEWFDFGV-YGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKI-LAITIVIMSIS 100 (490)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHH-HHHHHHHHHHH
Confidence 444444443343 34555555554 3 3332 2333 2466778888999999999999999998 55677777777
Q ss_pred HHHhhcCccCccccCCccc--hhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHH
Q 014600 104 FSSVFGGCMPCRILSTSTL--KVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYA 181 (422)
Q Consensus 104 ~~~lf~~~~p~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~ 181 (422)
..+.-. .++... .+....+++.+++.+++.+....+..+++.|+.+ +++|++..++...+..+|..+++.
T Consensus 101 ~~~~a~-------~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p-~~~Rg~~~~~~~~~~~~G~~lg~~ 172 (490)
T PRK10642 101 TFCIGL-------IPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSP-DRKRGFMGSWLDFGSIAGFVLGAG 172 (490)
T ss_pred HHHHHh-------cccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCC-CCCCcHHHHHHHHHHHHHHHHHHH
Confidence 654321 222111 1111224445567888888888888999999986 578999999888777788777766
Q ss_pred HHHHHHhhccCCCCCchHHHHHHHHHHHHHHHHHHHhhhhccccCccccc---c--cC-CC----cchhhhHHHHHHh-H
Q 014600 182 IAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKM---G--LR-GN----SHARISWAYWFKK-I 250 (422)
Q Consensus 182 ~~~~l~~~~~~~g~~~~~~~~~~~~~i~~~i~~i~~~i~~~~~~E~~~~~---~--~~-~~----~~~~~~~~~~~~n-~ 250 (422)
+...+...++.. .....|||+.+++.++++++.. +.....||++... + ++ ++ ++.+..+++++++ +
T Consensus 173 ~~~~~~~~~~~~--~~~~~gWR~~f~i~~~~~l~~~-~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (490)
T PRK10642 173 VVVLISTIVGEA--NFLDWGWRIPFFIALPLGIIGL-YLRHALEETPAFQQHVDKLEQGDREGLQDGPKVSFKEIATKHW 249 (490)
T ss_pred HHHHHHHhcCHH--HhcCccHHHHHHHHHHHHHHHH-HHHHcCCCChhHHHHHHhhhhhccccccccccCCHHHHHHHhH
Confidence 554443322110 0013589999988766555433 3345677764310 0 00 00 0122345666653 2
Q ss_pred HHHH-HHHHHHHHHHHHHhhhHHHHHHhhhccCccc
Q 014600 251 LYYQ-VALVYMLTRLVVNVSQAYLAFYVINDLRMGQ 285 (422)
Q Consensus 251 ~f~~-~~~~~~~~~~~~~~~~~y~~~y~~~~~~l~~ 285 (422)
+... .....++..........|+|.|+.+..+++.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~ 285 (490)
T PRK10642 250 RSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSE 285 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCH
Confidence 2222 2223333445566778899999987767654
No 77
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.61 E-value=5.3e-13 Score=137.07 Aligned_cols=158 Identities=14% Similarity=0.056 Sum_probs=111.4
Q ss_pred eeeeccchhHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHH
Q 014600 27 LYYGSGHMLNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSS 106 (422)
Q Consensus 27 ~~y~~g~~~~~~~~~~~~~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~ 106 (422)
....++.+...+........++....+.|+++.+.+.+.+...+...+..|+.|+++||+||||. ++.+.+..+++..+
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~-~~~~~~~~~~~~~~ 101 (496)
T PRK03893 23 SAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLA-MVISIVLFSVGTLA 101 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHH-HHHHHHHHHHHHHH
Confidence 44455555555665555555565555559999999999999999999999999999999999887 55677676666554
Q ss_pred hhcCccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 014600 107 VFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIV 186 (422)
Q Consensus 107 lf~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l 186 (422)
+.. .+ +.+ .+.+...+.+++.+....+..+++.|..+ +++|++..+.......+|..+++.+...+
T Consensus 102 ~~~-------~~--~~~----~l~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 167 (496)
T PRK03893 102 CGF-------AP--GYW----TLFIARLVIGMGMAGEYGSSATYVIESWP-KHLRNKASGFLISGFSIGAVVAAQVYSLV 167 (496)
T ss_pred HHH-------Hh--HHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 331 11 111 12223346777777777777888899876 67899999988888888888777665544
Q ss_pred HhhccCCCCCchHHHHHHHHHHH
Q 014600 187 FSVSTAKTHADLENQYRWIAYSS 209 (422)
Q Consensus 187 ~~~~~~~g~~~~~~~~~~~~~i~ 209 (422)
.+ ..+|++.+.+.
T Consensus 168 ~~----------~~~w~~~f~~~ 180 (496)
T PRK03893 168 VP----------VWGWRALFFIG 180 (496)
T ss_pred hc----------cCCHHHHHHHH
Confidence 32 23788776653
No 78
>PRK09952 shikimate transporter; Provisional
Probab=99.61 E-value=1.5e-12 Score=131.89 Aligned_cols=219 Identities=11% Similarity=0.033 Sum_probs=132.3
Q ss_pred CCChhHHHHHH-----HHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCccc--hhhhH
Q 014600 55 GLSPRGAAAVM-----LSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTL--KVETI 127 (422)
Q Consensus 55 gls~~~~g~i~-----~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~--~~~~~ 127 (422)
+.++. .|.+. .+.-+...+..++.|+++||+||||.+ +.+..+.+++..+... .| +... ++...
T Consensus 56 ~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l-~~~~~~~~~~~~~~~~--~~-----~~~~~~~~~~~ 126 (438)
T PRK09952 56 QVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRML-MLTVWMMGIATALIGL--LP-----SFSTIGWWAPV 126 (438)
T ss_pred CCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHH-HHHHHHHHHHHHHHhc--CC-----cHHHHHHHHHH
Confidence 67766 35443 355666778889999999999999984 5677777776655432 12 2111 12222
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchHHHHHHHHH
Q 014600 128 SYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAY 207 (422)
Q Consensus 128 ~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~~~~~~~~~~~~ 207 (422)
.+++.+.+.+++.+.......++..|..+ +++|++..+....+..+|.+++..+...+...++.. .....+||+.++
T Consensus 127 ~l~~~R~l~G~~~g~~~~~~~~~~~e~~p-~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~--~~~~~gWr~~f~ 203 (438)
T PRK09952 127 LLVTLRAIQGFAVGGEWGGAALLAVESAP-KNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDE--QFLSWGWRIPFL 203 (438)
T ss_pred HHHHHHHHHHhhhcccHHHHHHHHHHhCC-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHH--HhhccChHHHHH
Confidence 34444567888888777777788999876 578999988888888888877765554443332110 001358999888
Q ss_pred HHHHHHHHHHhhhhccccCcccccc---cC-CCcchhhhHHHHHHhHHHHHHH-HHHHHHHHHHHhhhHHHHHHhhhccC
Q 014600 208 SSIFIGCCFVGIFLSRTEEPRLKMG---LR-GNSHARISWAYWFKKILYYQVA-LVYMLTRLVVNVSQAYLAFYVINDLR 282 (422)
Q Consensus 208 i~~~i~~i~~~i~~~~~~E~~~~~~---~~-~~~~~~~~~~~~~~n~~f~~~~-~~~~~~~~~~~~~~~y~~~y~~~~~~ 282 (422)
+.+++.++.. ......+|.+..++ ++ ++++.....+.++|+|+.+... ...++..........|.|.|..+..+
T Consensus 204 ~~~~~~l~~~-~l~~~~~es~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g 282 (438)
T PRK09952 204 FSIVLVLIAL-WVRNGMEESAEFEQQQHEQAAAKKRIPVIEALLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLG 282 (438)
T ss_pred HHHHHHHHHH-HHHHhCCCChhHHHHHhhcccccccCCHHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 7766654432 22334556432111 10 1111112234467777665543 34444455566677899999988777
Q ss_pred ccch
Q 014600 283 MGQS 286 (422)
Q Consensus 283 l~~~ 286 (422)
++..
T Consensus 283 ~s~~ 286 (438)
T PRK09952 283 LPRE 286 (438)
T ss_pred CCHH
Confidence 6654
No 79
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.60 E-value=1.1e-12 Score=134.90 Aligned_cols=313 Identities=14% Similarity=0.069 Sum_probs=190.6
Q ss_pred CCCceeeeeeeccchhHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHH
Q 014600 20 PVGRWSVLYYGSGHMLNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVL 99 (422)
Q Consensus 20 ~l~~~~~~~y~~g~~~~~~~~~~~~~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~ 99 (422)
+++.+..-.+-.+++..++...+...-++-+.++..-|+..+|++.....+=..+..|+.|.+.||+.|||.. +.+-+.
T Consensus 6 plr~~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrril-i~~~~~ 84 (524)
T PF05977_consen 6 PLRNRNFRRLWIAQLISNLGDWMQTVALAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRIL-ILSQLL 84 (524)
T ss_pred cccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHH-HHHHHH
Confidence 3444444555567777777766665556666667677899999999999999899999999999999999984 455444
Q ss_pred HHHHHHHhhcCccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHH
Q 014600 100 VAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSL 179 (422)
Q Consensus 100 ~~i~~~~lf~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~ 179 (422)
.++....+.. . .+....+.+ . .+++.++.+++.++.....+++++++.+ ++|..++++......+++.+++
T Consensus 85 ~~~~~~~L~~---l-~~~~~~~~~-~---Ll~~~fl~g~~~a~~~PA~~A~ip~lV~-~~~L~~A~al~s~~~niar~iG 155 (524)
T PF05977_consen 85 RALVALLLAV---L-AFFGLLSPW-L---LLILTFLLGIGSAFFNPAWQAIIPELVP-KEDLPAANALNSISFNIARIIG 155 (524)
T ss_pred HHHHHHHHHH---H-HHhCcCCHH-H---HHHHHHHHHHHHHHHHHHHHHHHHHhcc-HhhHHHHHHHHHHHHHHHHhcc
Confidence 4333222211 0 001111222 1 1222346788888999999999999987 5778889999999899999999
Q ss_pred HHHHHHHHhhccCCCCCchHHHHHHHHHHHHHHHHHHHhhhhccccCcccccc-cCC--CcchhhhHHHHHHhHHHHHHH
Q 014600 180 YAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMG-LRG--NSHARISWAYWFKKILYYQVA 256 (422)
Q Consensus 180 ~~~~~~l~~~~~~~g~~~~~~~~~~~~~i~~~i~~i~~~i~~~~~~E~~~~~~-~~~--~~~~~~~~~~~~~n~~f~~~~ 256 (422)
+.+++.++..+ |..+.+.+.++..++ .+.+....|.+..+++ ++| ..+.++.++.+.+||..+..+
T Consensus 156 PalgG~Lva~~----------G~~~~f~inalsfl~-~i~~l~~~~~~~~~~~~~~e~~~~~l~~G~ryv~~~~~l~~~l 224 (524)
T PF05977_consen 156 PALGGILVAFF----------GAAAAFLINALSFLI-SILALLRWKPPPPPSSLPRERFFSALREGLRYVRSSPPLRSVL 224 (524)
T ss_pred chHHHHHHHHH----------HHHHHHHHHHHHHHH-HHHHHHHccccccccccchhhhhhhHHHHHHHHhcchHHHHHH
Confidence 98888887653 334455554433332 2233333443322111 111 124556677777788766555
Q ss_pred HHHHHHHHHHHhhhHHHHHHhhhccCccchhHh---------------HHHHHH--------HHHHHH-----HHHHH--
Q 014600 257 LVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKA---------------LVPAII--------YICSFI-----VSILL-- 306 (422)
Q Consensus 257 ~~~~~~~~~~~~~~~y~~~y~~~~~~l~~~~~~---------------~iP~~~--------~~~~~~-----~~~~~-- 306 (422)
...++..+........+|.+..+..+.++...+ ..|-+- ...+.+ ...++
T Consensus 225 ~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~ 304 (524)
T PF05977_consen 225 LRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALS 304 (524)
T ss_pred HHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcc
Confidence 444444444445566788888888777654321 011000 000000 00000
Q ss_pred H----------HHHhh-------h---hhhhhcCccccccceehhhHHHHHHHHHHHHHHHHHhHhhCC
Q 014600 307 Q----------VTGIS-------M---QNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSYQSMSP 355 (422)
Q Consensus 307 ~----------v~~~~-------~---~~~~~g~r~~g~~~~~s~~~~~~K~~~a~~~~i~g~~l~~~G 355 (422)
+ +.|.+ + ....+-+...|- ++|++......+.++|+.+.|.+.+..|
T Consensus 305 ~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GR--v~si~~~~~~g~~~lGsll~G~la~~~g 371 (524)
T PF05977_consen 305 PSFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGR--VFSIYQMVFFGGMPLGSLLWGFLADHFG 371 (524)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhH--HHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 0 11111 0 122233445666 8999999999999999999999877655
No 80
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.60 E-value=5.7e-13 Score=136.12 Aligned_cols=167 Identities=14% Similarity=0.083 Sum_probs=113.6
Q ss_pred CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCC-ccchhhhHHHHHHH
Q 014600 55 GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILST-STLKVETISYCVFA 133 (422)
Q Consensus 55 gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~-~~~~~~~~~~~~~~ 133 (422)
|.++.+.|++.++..+..++..|+.|+++||+||||.++ .+.++.+++......+ .+..... .........+++.+
T Consensus 51 ~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~-~~~~l~~i~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~R 127 (479)
T PRK10077 51 SAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLK-IAAVLFFISALGSAWP--EFGFTSIGPDNTGYVPEFVIYR 127 (479)
T ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH-HHHHHHHHHHHHHHhh--ccccccccccchhHHHHHHHHH
Confidence 788999999999999999999999999999999999854 5666666665433211 0000000 01111222334445
Q ss_pred HHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchHHHHHHHHHHHHHHH
Q 014600 134 AIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIG 213 (422)
Q Consensus 134 ~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~~~~~~~~~~~~i~~~i~ 213 (422)
++.+++.+...++..++++|+++ ++||++..++...+..+|.++++.++..+...... ......+||+.+.+.++..
T Consensus 128 ~l~G~~~g~~~~~~~~~i~e~~~-~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~--~~~~~~gWr~~f~~~~~~~ 204 (479)
T PRK10077 128 IIGGIGVGLASMLSPMYIAEIAP-AHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDA--SWLNTDGWRYMFASEAIPA 204 (479)
T ss_pred HHHhhhHhHHhhHHHHHHHhhCC-hhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcc--cccccCChHHHHHHHHHHH
Confidence 67889999989999999999987 57899999998888888888776655433321100 0001358999988877766
Q ss_pred HHHHhhhhccccCcc
Q 014600 214 CCFVGIFLSRTEEPR 228 (422)
Q Consensus 214 ~i~~~i~~~~~~E~~ 228 (422)
++..+. .+.+||.+
T Consensus 205 ~~~~~~-~~~l~~s~ 218 (479)
T PRK10077 205 LLFLML-LYFVPETP 218 (479)
T ss_pred HHHHHH-HHcCCCCc
Confidence 665443 45677754
No 81
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.59 E-value=1e-12 Score=148.34 Aligned_cols=204 Identities=10% Similarity=-0.089 Sum_probs=137.6
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHH--HHHHHHHHHHHHhhcCccCccccCCccchhhhHHHHHHHHH
Q 014600 58 PRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHG--AGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAI 135 (422)
Q Consensus 58 ~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll--~g~i~~~i~~~~lf~~~~p~~~~~~~~~~~~~~~~~~~~~l 135 (422)
....++..++..+..++..|+.|+++||+||||.... .+.+..++...+.+. . .+.+ .+++..++
T Consensus 51 ~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~-------~--~s~~----~l~~~~~l 117 (1140)
T PRK06814 51 NALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFH-------L--NSVP----LLFAALFL 117 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHH-------H--hhHH----HHHHHHHH
Confidence 3567888889999999999999999999999987422 222222222111111 1 1111 12233457
Q ss_pred HHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchHHHHHHHHHHHHHHHHH
Q 014600 136 FNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCC 215 (422)
Q Consensus 136 ~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~~~~~~~~~~~~i~~~i~~i 215 (422)
.+++.++......++++++.+ +++|++++++.+....+|.++++.+++.++.. .+|++.++.. ++..+
T Consensus 118 ~gi~~a~~~p~~~a~l~~~~~-~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~----------~~~~~~~~~~-~~~~~ 185 (1140)
T PRK06814 118 MGIHSALFGPIKYSILPDHLN-KDELLGANALVEAGTFIAILLGTIIGGLATIS----------GNFVILVALL-MGIAV 185 (1140)
T ss_pred HHHHHHhhchHHHHhhHhhcC-ccccchhhHHHHHHHHHHHHHHHHHHHHHHhc----------cccHHHHHHH-HHHHH
Confidence 888888888889999999987 57899999999999999999999888776643 2666666333 33333
Q ss_pred HHhhhhccccCccccccc-CCC----cchhhhHHHHHHhHHHHHHHHHHHHHHHHHHhhhHHHHHHhhhccCccch
Q 014600 216 FVGIFLSRTEEPRLKMGL-RGN----SHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQS 286 (422)
Q Consensus 216 ~~~i~~~~~~E~~~~~~~-~~~----~~~~~~~~~~~~n~~f~~~~~~~~~~~~~~~~~~~y~~~y~~~~~~l~~~ 286 (422)
..+++.+.++|++.++++ +.+ .+..+.++.+.+||.++...+...+.+.......+++|.|+.+..+.+..
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~ 261 (1140)
T PRK06814 186 LGWLASLFIPKTGNAAPDLKIDRNIIRSTITLLKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDEN 261 (1140)
T ss_pred HHHHHHhhCCCCCCCCCCCeeccchHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchH
Confidence 334445556665332111 111 12335678889999988877777776677777788999999988777654
No 82
>PRK15075 citrate-proton symporter; Provisional
Probab=99.59 E-value=2.9e-12 Score=129.59 Aligned_cols=249 Identities=13% Similarity=0.037 Sum_probs=141.3
Q ss_pred eeeeeccchhHHHHHHHHHHHHHHHHHHhCCChhHHHHHH-HH-----HHHHhhhhhhhhhhhhcccCCchhHHHHHHHH
Q 014600 26 VLYYGSGHMLNDITAACWFTYLLLFLTDIGLSPRGAAAVM-LS-----GQIADGFATIFIGELIDRFGHFKIWHGAGSVL 99 (422)
Q Consensus 26 ~~~y~~g~~~~~~~~~~~~~~l~~f~t~~gls~~~~g~i~-~i-----~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~ 99 (422)
..+..++.+.........+...|...+|.+.+..+.+.+. +. ..+...+..++.|+++||+||||.++ .+...
T Consensus 17 ~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~-~~~~~ 95 (434)
T PRK15075 17 ILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLI-VTLSI 95 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHH-HHHHH
Confidence 4445555555555556666666665566687776654332 22 22333467889999999999999854 56666
Q ss_pred HHHHHHHhhcCccCccccCCccch--hhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHH
Q 014600 100 VAVSFSSVFGGCMPCRILSTSTLK--VETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANL 177 (422)
Q Consensus 100 ~~i~~~~lf~~~~p~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~ 177 (422)
..++..++-. .++.... +.....++.+++.+++.+....+..++.+|+.+ +++|++..++......+|..
T Consensus 96 ~~~~~~l~~~-------~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p-~~~rg~~~~~~~~~~~~g~~ 167 (434)
T PRK15075 96 MASGTLLIAF-------VPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIAT-PGRKGFYTSWQSASQQVAVV 167 (434)
T ss_pred HHHHHHHHHh-------CCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCC-cccchHHHHHHHHHHHHHHH
Confidence 6666554321 1111100 001122334456777777766667789999986 68999999998888777777
Q ss_pred HHHHHHHHHHhhccCCCCCchHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccCCCcchhhhHHHHHHhHHHHHH-H
Q 014600 178 SLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKKILYYQV-A 256 (422)
Q Consensus 178 l~~~~~~~l~~~~~~~g~~~~~~~~~~~~~i~~~i~~i~~~i~~~~~~E~~~~~~~~~~~~~~~~~~~~~~n~~f~~~-~ 256 (422)
+++.++..+...+... .....+||+.+++..+...+ ........||.+...+++++.+.++.++...|+++.+.. .
T Consensus 168 ~g~~~g~~l~~~~~~~--~~~~~gWr~~f~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (434)
T PRK15075 168 FAALLGYLLNQWLSPA--QMAEWGWRIPFLIGCLIVPF-IFLIRRSLEETEEFLARKHRPSMREIFRSLAANWRIVLAGM 244 (434)
T ss_pred HHHHHHHHHHHhCCHH--HHhccchHHHHHHHHHHHHH-HHHHHHhcCCCHHHHHhhhccccccHHHHHHHhHHHHHHHH
Confidence 7766655544322100 00235899888764333221 111122233322100111122233445566677665433 2
Q ss_pred HHHHHHHHHHHhhhHHHHHHhhhccCccch
Q 014600 257 LVYMLTRLVVNVSQAYLAFYVINDLRMGQS 286 (422)
Q Consensus 257 ~~~~~~~~~~~~~~~y~~~y~~~~~~l~~~ 286 (422)
...++..........|.|.|+++..+++..
T Consensus 245 ~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~ 274 (434)
T PRK15075 245 LMVAMTTVSFYLITVYTPTFGKTVLHLSAA 274 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHH
Confidence 333334455567788999999887777544
No 83
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.59 E-value=2.2e-13 Score=137.94 Aligned_cols=152 Identities=15% Similarity=-0.029 Sum_probs=105.2
Q ss_pred CChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCccchhhhHHHHHHHHH
Q 014600 56 LSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAI 135 (422)
Q Consensus 56 ls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~~~~~~~~~~~~~l 135 (422)
.+..+.|++.++..+..++..|+.|+++||+||||. ++.+..+.+++..+... .+ ..... ..+++.+.+
T Consensus 68 ~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~-~~~~~~~~~~~~~~~~~--~~-----~~~~~---~~~~~~r~l 136 (481)
T TIGR00879 68 YSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKS-LLIIALLFVIGAILMGL--AA-----FALSV---EMLIVGRVL 136 (481)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHH-HHHHHHHHHHHHHHHHH--hc-----cccch---HHHHHHHHH
Confidence 448999999999999999999999999999999887 45666666666555421 11 11111 122333456
Q ss_pred HHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchHHHHHHHHHHHHHHHHH
Q 014600 136 FNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCC 215 (422)
Q Consensus 136 ~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~~~~~~~~~~~~i~~~i~~i 215 (422)
.+++.+.......+++.|+.+ +++|++..++.+.+..+|..+++.+. ...... ....+|++.+.+.++..++
T Consensus 137 ~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~~~~~~-~~~~~~------~~~~~w~~~f~~~~~~~~~ 208 (481)
T TIGR00879 137 LGIGVGIASALVPMYLSEIAP-KALRGALTSLYQLAITFGILVAYGFG-SGKVSL------NNTLGWRIPLGLQLIPAGL 208 (481)
T ss_pred HHhhhhHHHhHHHHHHHccCC-hhhhhhhhhHHHHHHHHHHHHHHHHH-HHhhcC------CCCccHHHHHHHHHHHHHH
Confidence 788888888888899999986 67899999998888888888877654 000111 1234899888875554444
Q ss_pred HHhhhhccccCc
Q 014600 216 FVGIFLSRTEEP 227 (422)
Q Consensus 216 ~~~i~~~~~~E~ 227 (422)
. ++..+.++|.
T Consensus 209 ~-~~~~~~l~~~ 219 (481)
T TIGR00879 209 L-FLGLFFLPES 219 (481)
T ss_pred H-HHHHhcCCCC
Confidence 3 3344555664
No 84
>PRK11043 putative transporter; Provisional
Probab=99.59 E-value=5.5e-12 Score=126.02 Aligned_cols=215 Identities=13% Similarity=0.085 Sum_probs=135.8
Q ss_pred HHHHHHHHH---HHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccC
Q 014600 42 CWFTYLLLF---LTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILS 118 (422)
Q Consensus 42 ~~~~~l~~f---~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~ 118 (422)
....|+|.+ .++.|.++.++|++.++..+...+..|+.|+++||+||||. +..+.....++..+... .+
T Consensus 21 ~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~-~~~~~~~~~~~~~~~~~-------~~ 92 (401)
T PRK11043 21 ATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPV-LLAGLSLFALGSLGMLW-------VE 92 (401)
T ss_pred HHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHH-HHHHHHHHHHHHHHHHH-------hc
Confidence 334444443 34449999999999999999999999999999999999887 55666666665544321 11
Q ss_pred CccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCch
Q 014600 119 TSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADL 198 (422)
Q Consensus 119 ~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~~~ 198 (422)
+.+ ...+...+.+++.+...+...++..|..+ +++|.+..+.......++..+++.+++.+.+
T Consensus 93 --~~~----~l~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~---------- 155 (401)
T PRK11043 93 --SAA----QLLVLRFVQAVGVCSAAVIWQALVIDRYP-AQKANRVFATIMPLVALSPALAPLLGAWLLN---------- 155 (401)
T ss_pred --CHH----HHHHHHHHHHhhhHHHHHHHHHHHHHhcC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------
Confidence 122 11222345666666666667788888875 4567777666666666666666655544432
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhccccCcccccccCCCcchhhhHHHHHHhHHHHHHHHHHHHHHHHHHhhhHHHHHHhh
Q 014600 199 ENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVI 278 (422)
Q Consensus 199 ~~~~~~~~~i~~~i~~i~~~i~~~~~~E~~~~~~~~~~~~~~~~~~~~~~n~~f~~~~~~~~~~~~~~~~~~~y~~~y~~ 278 (422)
..+|++.+.+.+++.++..++.++ .+|++.++ ++++.++++++++|||+++...+.+.+..........+.|.|..
T Consensus 156 ~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 231 (401)
T PRK11043 156 HFGWQAIFATLFAITLLLILPTLR-LKPSKKAR---KQSQDALTFKQLLKSKTYLGNVLIFAACSAAFFAWLTGSPFILE 231 (401)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHH-cCCCCCcc---ccchHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 237888877776666665544433 34432221 11223456788899998876555444444444455667787775
Q ss_pred hccCccch
Q 014600 279 NDLRMGQS 286 (422)
Q Consensus 279 ~~~~l~~~ 286 (422)
+ .+++..
T Consensus 232 ~-~g~s~~ 238 (401)
T PRK11043 232 Q-MGYSPA 238 (401)
T ss_pred H-cCCCHH
Confidence 4 466544
No 85
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.59 E-value=1.2e-13 Score=136.21 Aligned_cols=310 Identities=12% Similarity=0.082 Sum_probs=155.6
Q ss_pred eeeeeeeccchhHHHHHHHHHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHH-
Q 014600 24 WSVLYYGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVA- 101 (422)
Q Consensus 24 ~~~~~y~~g~~~~~~~~~~~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~- 101 (422)
+..+.++...+..-+.++...+|++.+++|. |++++++|.++++..+...+.+|+.|.++||.|.||..+..-.++..
T Consensus 7 ~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l 86 (412)
T PF01306_consen 7 KNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLL 86 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHT
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHH
Confidence 3455666666777778888999999999996 99999999999999999999999999999999977764433333222
Q ss_pred HHHHHhhcCccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCC-ccchhhHHHHHHHHHHHHHHHHH
Q 014600 102 VSFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLN-STSRVVLTSCRNAFTMVANLSLY 180 (422)
Q Consensus 102 i~~~~lf~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~-~~eR~~l~~~~~~~~~ig~~l~~ 180 (422)
.+-++.|. ..|. -+ .+.+ +..++..+.+++.+........++..+..+. .-|-++ .|. ++.+|..+++
T Consensus 87 ~~pff~~v-~~pl--l~-~n~~---lg~iig~i~l~~~f~~~~~~~Ea~~er~sr~~~feYG~---~R~-wGSig~ai~s 155 (412)
T PF01306_consen 87 FGPFFIYV-FGPL--LQ-SNFW---LGAIIGGIYLGLVFNAGVPLSEAYAERVSRRNGFEYGR---ARM-WGSIGFAIAS 155 (412)
T ss_dssp CHHHHHHT-HHHH--HH-TT-H---HHHHHTTTTTTTTTTTHHHHHHHHHHHHHHHHSS-HHH---HHH-HHHHHHHHHH
T ss_pred HHHHHHHH-HHHH--HH-HHHH---HHHHHHHHHHHHHHcccchHHHHHHHHHHHHhcCCcch---HHH-HhhHHHHHHH
Confidence 22222221 0120 00 0110 1111101112222222222223333333211 112233 343 3445555555
Q ss_pred HHHHHHHhhccCCCCCchHHHHHHHHHHHHHHHHHHHhhhhccccCcccc--ccc--C-CCcc-hhhhHHHHHHhHHHHH
Q 014600 181 AIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLK--MGL--R-GNSH-ARISWAYWFKKILYYQ 254 (422)
Q Consensus 181 ~~~~~l~~~~~~~g~~~~~~~~~~~~~i~~~i~~i~~~i~~~~~~E~~~~--~~~--~-~~~~-~~~~~~~~~~n~~f~~ 254 (422)
.+++.+++.. . ...+++....+++..++.++.-+|++.+ .++ + ++++ ..++..+++|+|++|.
T Consensus 156 ~~~G~L~~i~-------p----~~~fwi~s~~~~il~lll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~k~~~fw~ 224 (412)
T PF01306_consen 156 LLAGILFNIN-------P----NIIFWIASAAAIILLLLLLLLKPDVPPQAEVADALGAKKDKVSLKDVLSLFKMRNFWF 224 (412)
T ss_dssp HHHHHHHHHH-------H----HHHHHHHHHHHHHHHHHHHSS---SSSSS-SSTTSSS------HHHHHHHTTSHHHHH
T ss_pred HHhheeeeeC-------c----cHHHHHHHHHHHHHHHHHHHcCCcCchhhhhhcccccCCCCCcHHHHHHHhcchhHHH
Confidence 5555565431 1 1223333333333333333332222211 111 1 1111 1234568899999988
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHhhhccC---ccchhH---------------hHHHHHH---------HHHHHHHH--HH
Q 014600 255 VALVYMLTRLVVNVSQAYLAFYVINDLR---MGQSAK---------------ALVPAII---------YICSFIVS--IL 305 (422)
Q Consensus 255 ~~~~~~~~~~~~~~~~~y~~~y~~~~~~---l~~~~~---------------~~iP~~~---------~~~~~~~~--~~ 305 (422)
+.+..+......+..-..++.|.....+ .+.... ...|.++ .+.+.+.. +.
T Consensus 225 ~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~ 304 (412)
T PF01306_consen 225 FVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRII 304 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHH
Confidence 7665555444445555556666654322 121111 1223322 01111110 11
Q ss_pred H-------------HHH-H----------hhhhhhhhcCccccccceehhh-HHHHHHHHHHHHHHHHHhHhhCCCc
Q 014600 306 L-------------QVT-G----------ISMQNVLVGEDLSGCAFVCGTL-SFLDKMSCGIAVYVLQSYQSMSPTV 357 (422)
Q Consensus 306 ~-------------~v~-~----------~~~~~~~~g~r~~g~~~~~s~~-~~~~K~~~a~~~~i~g~~l~~~Gy~ 357 (422)
+ +.. + .-+.+...++|...+ .+... .+...+|..+.+.+.|.+.+..||+
T Consensus 305 ~~~~~~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt--~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~ 379 (412)
T PF01306_consen 305 GSGFATNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSAT--LYLVGFQFAKQIGIIILSPLAGYLYDRIGFQ 379 (412)
T ss_dssp HHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHH--HHHHHHTTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHH--HHHHHHHHHHHHHHHHHhhhHHhhHhhcCcH
Confidence 1 000 1 112455667787777 77774 7889999999999999999888875
No 86
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.59 E-value=6.9e-13 Score=134.15 Aligned_cols=266 Identities=11% Similarity=0.065 Sum_probs=190.2
Q ss_pred CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCccchhhhHHHHHHHH
Q 014600 55 GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAA 134 (422)
Q Consensus 55 gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~~~~~~~~~~~~~ 134 (422)
..+..+-|++++...+...+++...|++.||+|-||++. .+.+..++...+ .|.. ...+.+ ..+++++
T Consensus 69 ~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~-~~~~~sa~~t~l-----~P~a--a~~~~~----~~~~~R~ 136 (466)
T KOG2532|consen 69 DWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFF-ISGLISALLTLL-----TPLA--ASIGFY----LLLVLRF 136 (466)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHH-HHHHHHHHHHHH-----HHHH--HHhcch----hhHHHHH
Confidence 456789999999999999999999999999999999954 566666666544 2421 112221 2245567
Q ss_pred HHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchHHHHHHHHHHHHHHHH
Q 014600 135 IFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGC 214 (422)
Q Consensus 135 l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~~~~~~~~~~~~i~~~i~~ 214 (422)
+.|++++........+...+.+ ++||++..++-..+..+|.++..-+.+.+.+. ..||+..+++.+.+++
T Consensus 137 lqGl~~g~~~pa~~~i~~~W~P-~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s---------~~GW~sifY~~g~~g~ 206 (466)
T KOG2532|consen 137 LQGLGQGVLFPAIGSILAKWAP-PNERSTFIAILTAGSQLGTIITMPVSGLLCES---------SLGWPSIFYVFGIVGL 206 (466)
T ss_pred HhHHHHhHHHhhhhceeeeECC-HHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcc---------CCCCchHHHHHHHHHH
Confidence 8899999999999999999987 89999999999988888888766555444432 3589999999999999
Q ss_pred HHHhhhhccccCcccccc-----c-----C----C--CcchhhhHHHHHHhHHHHHHHHHHHHHHHHHHhhhHHHHHHhh
Q 014600 215 CFVGIFLSRTEEPRLKMG-----L-----R----G--NSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVI 278 (422)
Q Consensus 215 i~~~i~~~~~~E~~~~~~-----~-----~----~--~~~~~~~~~~~~~n~~f~~~~~~~~~~~~~~~~~~~y~~~y~~ 278 (422)
+..++.++..+|+|.+++ | + + +++.+.++++++|++++|.+.+..++...+......|.|.|+.
T Consensus 207 i~~~~w~~~~~d~P~~h~~is~~El~~I~~~k~~~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~ 286 (466)
T KOG2532|consen 207 IWFILWFLFYSDSPSKHPNISEKELKYIEKGKSEAHVKKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLK 286 (466)
T ss_pred HHHHHHHHHhcCCcccCCCCCHHHHHHHHhcccccccCCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 999988888887664321 1 0 0 1113457999999999999988888888889999999999999
Q ss_pred hccCccchhHh---HHHHHHH-HHHHHHHHHHHHHHhhhhhhhhcCccccccceehhhHHHHHHHHHHHHHHHHHhHhhC
Q 014600 279 NDLRMGQSAKA---LVPAIIY-ICSFIVSILLQVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSYQSMS 354 (422)
Q Consensus 279 ~~~~l~~~~~~---~iP~~~~-~~~~~~~~~~~v~~~~~~~~~~g~r~~g~~~~~s~~~~~~K~~~a~~~~i~g~~l~~~ 354 (422)
+.++++-...+ .+|.+.. +..++. +..+|+.-.|.-.. +..+|+-+.++....+..+-..
T Consensus 287 ~VL~f~v~~~G~~salP~l~~~~~k~~~---------g~lsD~l~~~~ls~-------t~~rkifn~i~~~~~ai~l~~l 350 (466)
T KOG2532|consen 287 EVLGFDVRETGFLSALPFLAMAIVKFVA---------GQLSDRLTFRILSE-------TTVRKIFNTIAFGGPAVFLLVL 350 (466)
T ss_pred HHhCCChhhhhHHHHHHHHHHHHHHHHH---------HHHHHHHhhccCch-------HhHHHHHHhHHHHHHHHHHHee
Confidence 99998876654 4565442 222222 22233333321122 3556666666666666666666
Q ss_pred CCcc
Q 014600 355 PTVL 358 (422)
Q Consensus 355 Gy~~ 358 (422)
+|.+
T Consensus 351 ~~~~ 354 (466)
T KOG2532|consen 351 AFTS 354 (466)
T ss_pred eecC
Confidence 6654
No 87
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.58 E-value=2e-12 Score=132.61 Aligned_cols=171 Identities=10% Similarity=-0.043 Sum_probs=123.4
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcc-cCCchhHHHHHHHHHHHHHHHhh
Q 014600 31 SGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDR-FGHFKIWHGAGSVLVAVSFSSVF 108 (422)
Q Consensus 31 ~g~~~~~~~~~~~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr-~Grrrp~ll~g~i~~~i~~~~lf 108 (422)
...+.....++...++++.|+++. |++..+++++......+..+..|+.|+++|| +||||. ++.|.+..+++..+++
T Consensus 21 ~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~-~~~g~~~~~~g~~~~~ 99 (489)
T PRK10207 21 FVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRT-IVLGAIVLAIGYFMTG 99 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHH-HHHHHHHHHHHHHHHH
Confidence 445667788888889999999987 9999999999999999999999999999999 999998 5578888888776655
Q ss_pred cCccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCcc-chhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 014600 109 GGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNST-SRVVLTSCRNAFTMVANLSLYAIAFIVF 187 (422)
Q Consensus 109 ~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~-eR~~l~~~~~~~~~ig~~l~~~~~~~l~ 187 (422)
. +++ .. . ..+ +...+.+++.+.......+++.|..++++ +|++..++.+...++|..+++.+++.+.
T Consensus 100 ~-------~~~--~~-~-ll~-~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~ 167 (489)
T PRK10207 100 M-------SLL--KP-D-LIF-IALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIA 167 (489)
T ss_pred H-------hcc--ch-h-HHH-HHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHH
Confidence 3 111 11 1 111 12235677777777777899999987544 4577788888899999998887765554
Q ss_pred hhccCCCCCchHHHHHHHHHHHHHHHHHHHhhhhcccc
Q 014600 188 SVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTE 225 (422)
Q Consensus 188 ~~~~~~g~~~~~~~~~~~~~i~~~i~~i~~~i~~~~~~ 225 (422)
+ ..||++.+.+.++ +++..++.+...|
T Consensus 168 ~----------~~gw~~~F~i~~i-~~~~~~~~~~~~~ 194 (489)
T PRK10207 168 D----------KFGYSVTYNLCGA-GLIIALLVYFACR 194 (489)
T ss_pred H----------hhChHHHHHHHHH-HHHHHHHHHHHcc
Confidence 3 2378888877543 3333333333334
No 88
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.53 E-value=1.2e-11 Score=127.51 Aligned_cols=164 Identities=17% Similarity=0.136 Sum_probs=111.0
Q ss_pred CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCccchhhhHHHHHHHH
Q 014600 55 GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAA 134 (422)
Q Consensus 55 gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~~~~~~~~~~~~~ 134 (422)
..+..+.+++.....+...+..++.|+++||+|||+.+ ..+.++..++..+... .+ +.........+++.++
T Consensus 52 ~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~-~~~~~~~~v~~~~~~~--~~-----~~~~~~~~~~~~~~r~ 123 (502)
T TIGR00887 52 PLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVY-GMELIIMIIATVASGL--SP-----GSSPKSVMATLCFWRF 123 (502)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHH-HHHHHHHHHHHHHHHH--cc-----CcccchHHHHHHHHHH
Confidence 35567789999999999999999999999999999884 4566666666544331 11 1111111123344456
Q ss_pred HHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccC-CCCC------------chHHH
Q 014600 135 IFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTA-KTHA------------DLENQ 201 (422)
Q Consensus 135 l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~-~g~~------------~~~~~ 201 (422)
+.+++.+....+..++..|.++ +++|++..++......+|.++++.++..+...+.. .+.. ....+
T Consensus 124 l~G~~~g~~~~~~~~~~~e~~p-~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (502)
T TIGR00887 124 WLGVGIGGDYPLSAIITSEFAT-KKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYM 202 (502)
T ss_pred HHHHHHhhhhHHHHHHHHHhcC-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhccc
Confidence 7888888888888999999987 68999999999888889888887776554432210 0000 01237
Q ss_pred HHHHHHHHHHHHHHHHhhhhccccCcc
Q 014600 202 YRWIAYSSIFIGCCFVGIFLSRTEEPR 228 (422)
Q Consensus 202 ~~~~~~i~~~i~~i~~~i~~~~~~E~~ 228 (422)
||+.+.+.++.+++. ++..+.+||.|
T Consensus 203 WR~~~~~~~ip~~i~-~~~~~~lpESp 228 (502)
T TIGR00887 203 WRILIGFGAVPALLA-LYFRLTIPETP 228 (502)
T ss_pred HHHHHHHHHHHHHHH-HHHHHhCCCCH
Confidence 999887665555543 34456678864
No 89
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.52 E-value=5e-12 Score=129.11 Aligned_cols=296 Identities=11% Similarity=0.023 Sum_probs=169.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhccc---C-CchhHHHHHHHHHH-HHHHHh
Q 014600 34 MLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRF---G-HFKIWHGAGSVLVA-VSFSSV 107 (422)
Q Consensus 34 ~~~~~~~~~~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~---G-rrrp~ll~g~i~~~-i~~~~l 107 (422)
+..++. .+...-+++++.+. |+++++++.......+-..+ .|++|.++||+ | |||+|++.+.+... +.+..
T Consensus 36 ~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~-K~l~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~- 112 (468)
T TIGR00788 36 FVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWAL-KPFAGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGL- 112 (468)
T ss_pred HHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCCCCccchHHHHHHHHHHHHHHHHh-
Confidence 455555 55566677888876 99999998888888887776 77899999986 4 57888888776653 33221
Q ss_pred hcCccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhh---HHHHHHHHHHHHHHHHHHHHH
Q 014600 108 FGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVV---LTSCRNAFTMVANLSLYAIAF 184 (422)
Q Consensus 108 f~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~---l~~~~~~~~~ig~~l~~~~~~ 184 (422)
. + ..+ +.. ..+.+...+.+++.+..+++..++..|..+ +++.. +.++.....++|.++++.+++
T Consensus 113 l----~--~~~--~~~---~~~~~~~~l~~~~~a~~dv~~da~~~e~~~--~~~~~~~~~~s~~~~~~~~G~~vg~~l~G 179 (468)
T TIGR00788 113 L----P--GKV--SSA---KVAAAFIFLAALAKALYDVLVDSLYSERIR--ESPSAGPSLVSWMWGASATGGLISSLLGG 179 (468)
T ss_pred c----c--ccc--chH---HHHHHHHHHHHHHHHHHHHhHHHHHhhhhh--cCCCcCCCeeeHHHHHHHHHHHHHHHHHH
Confidence 1 1 011 111 111112235778888899999999999987 33332 333333334577777777776
Q ss_pred HHHhhccCCCCCchHHHHHHHHHHHHHHHHHHHhhhhccccCccc--ccccCCC---------c----ch---hhhHHHH
Q 014600 185 IVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRL--KMGLRGN---------S----HA---RISWAYW 246 (422)
Q Consensus 185 ~l~~~~~~~g~~~~~~~~~~~~~i~~~i~~i~~~i~~~~~~E~~~--~~~~~~~---------~----~~---~~~~~~~ 246 (422)
.+.+. .+|+..+.+.+.+.++. .+..++.+|++. .++.+++ . .. .+.++..
T Consensus 180 ~l~~~----------~~~~~~f~~~a~l~ll~-~~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 248 (468)
T TIGR00788 180 PLLDK----------TLTRILFLITAALLLLQ-LFVSNLSKERRAFVRPRIGTYLEMNMALLTLGVLANVKVQILGLRGA 248 (468)
T ss_pred HHHHh----------cCcchHHHHHHHHHHHH-HHHHHhcccccccccccccccchhhhhhhhhhHHHHHHHHHHHHHHH
Confidence 66543 25777777766666655 444566788541 1110110 0 01 1234455
Q ss_pred HHhHHHHHHHHHHHHHHHHHHhhhHHHHHHhhhccCccchhHhH---------HHHHH--------------HHHHHHHH
Q 014600 247 FKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKAL---------VPAII--------------YICSFIVS 303 (422)
Q Consensus 247 ~~n~~f~~~~~~~~~~~~~~~~~~~y~~~y~~~~~~l~~~~~~~---------iP~~~--------------~~~~~~~~ 303 (422)
+|+|..+..++..++.+....+...++..+..+..++++...+. ++... ...+.++.
T Consensus 249 l~~~~i~~~l~fifl~~~~~~~~~~~~f~~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~ 328 (468)
T TIGR00788 249 IQLLEIAKPLIFIFLSYANLPGASGSVFCATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLY 328 (468)
T ss_pred HhcHHHHHHHHHHHHHHhhcCCCCceeEEEEcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHH
Confidence 77887766443333311222222222222334556666654321 00000 01111111
Q ss_pred HHHH------------------------------HH-H------hhhhhhhhcCccccccceehhhHHHHHHHHHHHHHH
Q 014600 304 ILLQ------------------------------VT-G------ISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYV 346 (422)
Q Consensus 304 ~~~~------------------------------v~-~------~~~~~~~~g~r~~g~~~~~s~~~~~~K~~~a~~~~i 346 (422)
.++. +. + ..+......++.||+ .|+..+.++.+|..++..+
T Consensus 329 ~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt--~~al~~s~~~lg~~v~~~~ 406 (468)
T TIGR00788 329 TLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESS--VFALLASILHLGSSVSGFL 406 (468)
T ss_pred HHHHhCceeeeeccccccCCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCceeh--HHHHHHHHHHHHHHHHHHH
Confidence 1100 00 0 111234456778999 9999999999999999999
Q ss_pred HHHhHhhCCCcc
Q 014600 347 LQSYQSMSPTVL 358 (422)
Q Consensus 347 ~g~~l~~~Gy~~ 358 (422)
.|.+.+..|-+.
T Consensus 407 gg~l~~~~g~~~ 418 (468)
T TIGR00788 407 GVLLMETIGITC 418 (468)
T ss_pred HHHHHHHcCCCc
Confidence 999999998443
No 90
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.51 E-value=4.8e-12 Score=127.45 Aligned_cols=211 Identities=7% Similarity=-0.008 Sum_probs=143.6
Q ss_pred hCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCccchhhhHHHHHHH
Q 014600 54 IGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFA 133 (422)
Q Consensus 54 ~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~~~~~~~~~~~~ 133 (422)
.|+|+.+.+++.++..+..++...+.|++.||+|.||. +.++....++...++-. .++ + ...+. ..+++..
T Consensus 65 ~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v-~~~~~ll~~i~~~~~~~-a~~-~--~~~s~----~~lli~r 135 (462)
T PRK15034 65 FNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRW-TVFSTAILIIPCVWLGI-AVQ-N--PNTPF----GIFIVIA 135 (462)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHH-HHHHHHHHHHHHHHHHH-HHc-c--cCCCH----HHHHHHH
Confidence 49999999999999999999998888999999999987 44566666655543321 000 0 01122 2233334
Q ss_pred HHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHh-----hccCCC---CCchHHHHHHH
Q 014600 134 AIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFS-----VSTAKT---HADLENQYRWI 205 (422)
Q Consensus 134 ~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~-----~~~~~g---~~~~~~~~~~~ 205 (422)
.+.+++ +....+....++++.+ ++||+++.++....+++|..+.+.+.++++. .++..+ ..+...+|+..
T Consensus 136 ~l~Gig-g~~f~~~~~~vs~wfp-~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~ 213 (462)
T PRK15034 136 LLCGFA-GANFASSMGNISFFFP-KAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANA 213 (462)
T ss_pred HHHHHH-HHhHHHHHHHHHHHCC-HhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHH
Confidence 466665 5566778888888875 6889999999877778888777777655442 222100 00124567777
Q ss_pred HHHHHHHHHHHHhhhhccccCcccccccCCCcchhhhHHHHHHhHHHHHHHHHHHHHHHHHHhhhHHHHHHhhhcc
Q 014600 206 AYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDL 281 (422)
Q Consensus 206 ~~i~~~i~~i~~~i~~~~~~E~~~~~~~~~~~~~~~~~~~~~~n~~f~~~~~~~~~~~~~~~~~~~y~~~y~~~~~ 281 (422)
..+..++.++..++.++..++++. ++.+ .++.++.+|||..|.+.+.|++......+...|+|+|..+..
T Consensus 214 ~~~~~~~~iv~~i~~~~~~~~~~~-----~~~~-~~~~~~vlk~~~~Wllslly~~tFG~fvg~s~~lp~~~~~~~ 283 (462)
T PRK15034 214 AWIWVPLLAIATIAAWSGMNDIAS-----SRAS-IADQLPVLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQF 283 (462)
T ss_pred HHHHHHHHHHHHHHHHHhCCCccc-----cccC-HHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 777777776766666666555321 1223 344567999999988888888877777777889999987754
No 91
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.49 E-value=3.5e-11 Score=123.18 Aligned_cols=164 Identities=12% Similarity=-0.077 Sum_probs=121.1
Q ss_pred eeeccchhHHHHHHHHHHHHHHHHHH---hCCChhHHHHHHHHHHHHhhhhhhhhhhhhcc-cCCchhHHHHHHHHHHHH
Q 014600 28 YYGSGHMLNDITAACWFTYLLLFLTD---IGLSPRGAAAVMLSGQIADGFATIFIGELIDR-FGHFKIWHGAGSVLVAVS 103 (422)
Q Consensus 28 ~y~~g~~~~~~~~~~~~~~l~~f~t~---~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr-~Grrrp~ll~g~i~~~i~ 103 (422)
......+...+.+....++++.|+++ .|++..++|.+..+..+...+..++.|+++|| +||||. ++.+.+..+++
T Consensus 14 ~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~-l~~~~~~~~~g 92 (475)
T TIGR00924 14 TLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKT-MVLGGIVLMLG 92 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHH-HHHHHHHHHHH
Confidence 33456677788888888999999987 49999999999999999999999999999999 899998 56777888877
Q ss_pred HHHhhcCccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCcc--chhhHHHHHHHHHHHHHHHHHH
Q 014600 104 FSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNST--SRVVLTSCRNAFTMVANLSLYA 181 (422)
Q Consensus 104 ~~~lf~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~--eR~~l~~~~~~~~~ig~~l~~~ 181 (422)
..++.. .+ +.. . +.+...+.+++.+....+..++.++++++++ +|++..++.+...++|..+++.
T Consensus 93 ~~~~~~-------~~--~~~-~---~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~ 159 (475)
T TIGR00924 93 HFMLAM-------SI--YPD-L---IFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPL 159 (475)
T ss_pred HHHHHh-------cc--cHh-H---HHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHH
Confidence 655432 11 111 1 1122235667777777788899999887543 4888888888899999988877
Q ss_pred HHHHHHhhccCCCCCchHHHHHHHHHHHHHHHHH
Q 014600 182 IAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCC 215 (422)
Q Consensus 182 ~~~~l~~~~~~~g~~~~~~~~~~~~~i~~~i~~i 215 (422)
+.+.+.+ ..+|++.+.+.++..++
T Consensus 160 l~g~l~~----------~~g~~~~f~~~~~~~~~ 183 (475)
T TIGR00924 160 LAGVIAE----------NYGYHVGFNLAAVGMVI 183 (475)
T ss_pred HHHHHHH----------hcChHHHHHHHHHHHHH
Confidence 6654432 23688877766544333
No 92
>TIGR00898 2A0119 cation transport protein.
Probab=99.45 E-value=4.6e-11 Score=123.07 Aligned_cols=146 Identities=16% Similarity=0.154 Sum_probs=104.5
Q ss_pred hCCC---hhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCccchhhhHHHH
Q 014600 54 IGLS---PRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYC 130 (422)
Q Consensus 54 ~gls---~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~~~~~~~~~ 130 (422)
.+++ +.+.|++.++..+...+..|+.|+++||+||||.+ +.+.+..+++..+... +++ . ..++
T Consensus 119 ~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~-~~~~~~~~i~~~~~~~-------~~~--~----~~~~ 184 (505)
T TIGR00898 119 WDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVL-LLSTLVTAVSGVLTAF-------SPN--Y----TVFL 184 (505)
T ss_pred ecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHH-HHHHHHHHHHHHHHHH-------ccc--H----HHHH
Confidence 3888 89999999999999999999999999999998874 5566666666544321 111 1 1233
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchHHHHHHHHHHHH
Q 014600 131 VFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSI 210 (422)
Q Consensus 131 ~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~~~~~~~~~~~~i~~ 210 (422)
+.+.+.+++.+.......++..|+.+ +++|++..+....+..+|.++++.++.. + ..||+.+.+.+
T Consensus 185 ~~r~l~G~~~~~~~~~~~~~~~e~~~-~~~r~~~~~~~~~~~~~g~~~~~~~~~~----~---------~~wr~~~~~~~ 250 (505)
T TIGR00898 185 VFRLLVGMGIGGIWVQAVVLNTEFLP-KKQRAIVGTLIQVFFSLGLVLLPLVAYF----I---------PDWRWLQLAVS 250 (505)
T ss_pred HHHHHHHhhccchHHHHHHHhheecC-hhhhHHHHHHHHHHHHHHHHHHHHHHHH----h---------hHHHHHHHHHH
Confidence 34456788888878888899999986 6789998888777777776665443321 1 14888888877
Q ss_pred HHHHHHHhhhhccccCcc
Q 014600 211 FIGCCFVGIFLSRTEEPR 228 (422)
Q Consensus 211 ~i~~i~~~i~~~~~~E~~ 228 (422)
++.++..+.. +.++|.+
T Consensus 251 i~~~~~~~~~-~~~~esp 267 (505)
T TIGR00898 251 LPTFLFFLLS-WFVPESP 267 (505)
T ss_pred HHHHHHHHHH-HhcCCCh
Confidence 7766655444 5667753
No 93
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.45 E-value=2.5e-12 Score=123.28 Aligned_cols=204 Identities=12% Similarity=0.055 Sum_probs=151.7
Q ss_pred CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCccchhhhHHHHHHHH
Q 014600 55 GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAA 134 (422)
Q Consensus 55 gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~~~~~~~~~~~~~ 134 (422)
+-+.+++|+++....+...+.+|+.|.+.||.|+|-| +++|...+..+.++ |. +. .+.. ..++.+.
T Consensus 102 ~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ip-m~~Gl~vmf~sTil-Fa------fg--~sy~----~l~vAR~ 167 (464)
T KOG3764|consen 102 DRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIP-MVAGLFVMFLSTIL-FA------FG--NSYP----MLFVARS 167 (464)
T ss_pred cccccchhHHHHHHHHHHHHhcccchhhHHHhccccH-HHHHHHHHHHHHHH-HH------Hc--chhH----HHHHHHH
Confidence 4567899999999999999999999999999999999 56787777776654 32 11 2222 2234456
Q ss_pred HHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchHHHHHHHHHHHHHHHH
Q 014600 135 IFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGC 214 (422)
Q Consensus 135 l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~~~~~~~~~~~~i~~~i~~ 214 (422)
+.+++.++.++.-.+++++..++++||+++.++...+..+|-++++-+++.+.+. .|+...|++.+++.+
T Consensus 168 LQgvgsA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~----------~Gk~aPFlVL~~v~L 237 (464)
T KOG3764|consen 168 LQGVGSAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEF----------AGKSAPFLVLAIVLL 237 (464)
T ss_pred HhhhhHHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhh----------cCCcCcHHHHHHHHH
Confidence 8999999999999999999999999999999999999999988887777666554 266778888888888
Q ss_pred HHHhhhhccccCcccccccCCCcchhhhHHHHHHhHHHHHHHHHHHHHHHHHHhhhHHHHHHhhhccCccc
Q 014600 215 CFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQ 285 (422)
Q Consensus 215 i~~~i~~~~~~E~~~~~~~~~~~~~~~~~~~~~~n~~f~~~~~~~~~~~~~~~~~~~y~~~y~~~~~~l~~ 285 (422)
+-..+-++..+.++.++++. .....+.+++++|.-+...+.-..++.+......-++.+..+.+..+.
T Consensus 238 ld~~L~l~vi~p~~~~~~~~---~~~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~ 305 (464)
T KOG3764|consen 238 LDGALQLLVIEPTEMDPDST---EQGTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPG 305 (464)
T ss_pred HHHHHHHheeCccccCcccc---ccCccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHhccCCC
Confidence 87777766665543322111 112345778888876655555555556666667777888888777444
No 94
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.43 E-value=4.6e-11 Score=120.62 Aligned_cols=163 Identities=22% Similarity=0.132 Sum_probs=109.3
Q ss_pred HHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcc---cC-CchhHHHHHHHHHHHHHHHhhcCccCccccC
Q 014600 44 FTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDR---FG-HFKIWHGAGSVLVAVSFSSVFGGCMPCRILS 118 (422)
Q Consensus 44 ~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr---~G-rrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~ 118 (422)
..-..+|++|. |+++++......+..+=. ..-|+.|.++|- +| |||||++++.++.+++...+.. .|..
T Consensus 9 ~~~~~~~l~~~l~ls~~~~~~~~~~~~lPw-~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~--~~~~--- 82 (433)
T PF03092_consen 9 RLAIYPFLKDDLGLSPAQLQRLSSLASLPW-SIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLAL--LPAS--- 82 (433)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHhCch-HHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHh--cccc---
Confidence 33455677776 999999998888887733 358999999994 67 9999999998888665544331 3311
Q ss_pred CccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCC-ccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCc
Q 014600 119 TSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLN-STSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHAD 197 (422)
Q Consensus 119 ~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~-~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~~ 197 (422)
..+.... .+...+..+++.+.++...++..|..++ +++|+.+.+.......+|++++..+.+++.+..
T Consensus 83 ~~s~~~~----~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~------- 151 (433)
T PF03092_consen 83 ESSAAIA----VVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSF------- 151 (433)
T ss_pred cchhhhH----HHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcC-------
Confidence 1111111 1122357788999999999999999864 455788888888888889988888887776532
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhccccC
Q 014600 198 LENQYRWIAYSSIFIGCCFVGIFLSRTEE 226 (422)
Q Consensus 198 ~~~~~~~~~~i~~~i~~i~~~i~~~~~~E 226 (422)
++++.+.+.+.+..+..+...+..+|
T Consensus 152 ---~~~~~f~i~~~~~~l~~~~~~~~~~e 177 (433)
T PF03092_consen 152 ---GPQGVFLISAALPLLMLIVALFLLEE 177 (433)
T ss_pred ---CCeEEehHHHHHHHHHHHHHHHhhhh
Confidence 22333444444444444444555565
No 95
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.42 E-value=3.3e-12 Score=134.81 Aligned_cols=236 Identities=11% Similarity=0.053 Sum_probs=161.1
Q ss_pred HHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccC---------
Q 014600 48 LLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILS--------- 118 (422)
Q Consensus 48 ~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~--------- 118 (422)
+..-.+.+++..+.|++.+..-+..++..+++|++.||+||||. +.+|.++++++..+.-. |-.+.+
T Consensus 57 ~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~-i~~g~ll~~lg~ll~al---phf~~~~y~~~~~~~ 132 (633)
T TIGR00805 57 TTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIV-IGIGCAIMGLGSFLLSL---PHFLSGRYSYSTTVS 132 (633)
T ss_pred hhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceE-EEecHHHHHHHHHHHhC---hHHhcCCcccccccc
Confidence 33333449999999999999999999999999999999998775 77888888888765432 310000
Q ss_pred ---------------C---------------ccc--hhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHH
Q 014600 119 ---------------T---------------STL--KVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTS 166 (422)
Q Consensus 119 ---------------~---------------~~~--~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~ 166 (422)
+ .+. ...+..+++.+++.+++.+...+...+++.|..+ +++|++..+
T Consensus 133 ~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~-~~~~~~~~~ 211 (633)
T TIGR00805 133 STGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAK-SKNSPLYIG 211 (633)
T ss_pred ccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCC-ccccHHHHH
Confidence 0 000 1112334445567888888777778889999876 688999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCC----------CCCchH--HHHHHHHHHHHHHHHHHHhhhhccccCcccc---c
Q 014600 167 CRNAFTMVANLSLYAIAFIVFSVSTAK----------THADLE--NQYRWIAYSSIFIGCCFVGIFLSRTEEPRLK---M 231 (422)
Q Consensus 167 ~~~~~~~ig~~l~~~~~~~l~~~~~~~----------g~~~~~--~~~~~~~~i~~~i~~i~~~i~~~~~~E~~~~---~ 231 (422)
+......+|..++..+++.+.....+. ...|.+ .+|+..+++.++++++..+..+++.|+.+.+ +
T Consensus 212 i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~~p~~lp~~~~~~ 291 (633)
T TIGR00805 212 ILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFFFPKALPKEGKRV 291 (633)
T ss_pred HHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCccccc
Confidence 999999999999888877766543111 011211 2477778887777776655544444332211 0
Q ss_pred c----cC------CC----------cchhhhHHHHHHhHHHHHHHHHHHHHHHHHHhhhHHHHHHhhhccCccchhH
Q 014600 232 G----LR------GN----------SHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAK 288 (422)
Q Consensus 232 ~----~~------~~----------~~~~~~~~~~~~n~~f~~~~~~~~~~~~~~~~~~~y~~~y~~~~~~l~~~~~ 288 (422)
+ ++ ++ .+..+.++.++|||.++...+..++......+..+|+|+|+++..++++...
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~a 368 (633)
T TIGR00805 292 NVDVHETEKLEKSEDKSRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNGYITFLPKYLENQYGISSAEA 368 (633)
T ss_pred chhhhhhhcccccccccchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHH
Confidence 0 00 00 0112446789999999888888888778888899999999999888877654
No 96
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.41 E-value=2.1e-10 Score=122.21 Aligned_cols=170 Identities=13% Similarity=-0.034 Sum_probs=116.4
Q ss_pred HHHHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCccc
Q 014600 43 WFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTL 122 (422)
Q Consensus 43 ~~~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~ 122 (422)
+...+|....+.|+++.+.|++.++..+..++..++.|+++||+|||+.. +++.++.+++..+... .+ +.
T Consensus 186 is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~l-ii~lil~~i~~ll~af-------a~--s~ 255 (742)
T TIGR01299 186 VGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCL-LICLSVNGFFAFFSSF-------VQ--GY 255 (742)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH-HHHHHHHHHHHHHHHH-------Hh--hH
Confidence 43444444445599999999999999999999999999999999999885 4565555555443321 11 11
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccC---CCCCchH
Q 014600 123 KVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTA---KTHADLE 199 (422)
Q Consensus 123 ~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~---~g~~~~~ 199 (422)
..+++..++.+++.+.......+++.|+++ +++|++..++...+..+|.++++.++..++...+. .+.....
T Consensus 256 ----~~llv~R~l~G~g~g~~~p~~~~~isE~~p-~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~ 330 (742)
T TIGR01299 256 ----GFFLFCRLLSGFGIGGAIPIVFSYFAEFLA-QEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQF 330 (742)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhcccccccc
Confidence 123334457888888878888999999986 67899999988888888888887766555432211 0000123
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhccccCcc
Q 014600 200 NQYRWIAYSSIFIGCCFVGIFLSRTEEPR 228 (422)
Q Consensus 200 ~~~~~~~~i~~~i~~i~~~i~~~~~~E~~ 228 (422)
.+||+.+++.++.+++. ++..+++||.|
T Consensus 331 ~gWR~l~~i~~lp~ll~-ll~~~~lPESP 358 (742)
T TIGR01299 331 HSWRVFVIVCAFPCVFA-IGALTFMPESP 358 (742)
T ss_pred ccHHHHHHHHHHHHHHH-HHHHHHcCCCH
Confidence 47999887766655544 44456667753
No 97
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.41 E-value=3.5e-10 Score=116.55 Aligned_cols=158 Identities=10% Similarity=-0.028 Sum_probs=110.7
Q ss_pred cchhHHHHHHHHHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcc-cCCchhHHHHHHHHHHHHHHHhhc
Q 014600 32 GHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDR-FGHFKIWHGAGSVLVAVSFSSVFG 109 (422)
Q Consensus 32 g~~~~~~~~~~~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr-~Grrrp~ll~g~i~~~i~~~~lf~ 109 (422)
..+.....+..+.++++.|+++. |++..+++.+............++.|+++|| +||||. ++.+.+..+++..++..
T Consensus 29 ~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~-~~~g~~~~~ig~~l~~~ 107 (500)
T PRK09584 29 IELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRV-IMLGAIVLAIGYALVAW 107 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHH-HHHHHHHHHHHHHHHHH
Confidence 45667777777888999999887 9999999988888777767777899999999 599988 55677777777554431
Q ss_pred CccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCcc-chhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 014600 110 GCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNST-SRVVLTSCRNAFTMVANLSLYAIAFIVFS 188 (422)
Q Consensus 110 ~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~-eR~~l~~~~~~~~~ig~~l~~~~~~~l~~ 188 (422)
+++ ... . +.+...+.+++.+.......++.+++.++++ +|++..++.+.+.++|..+++.+.+.+.+
T Consensus 108 -------~~~-~~~-~---l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~ 175 (500)
T PRK09584 108 -------SGH-DAG-I---VYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAA 175 (500)
T ss_pred -------hcc-cHH-H---HHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 111 111 1 1122235667777666777789999886443 34566777778889998888777655543
Q ss_pred hccCCCCCchHHHHHHHHHHHHHH
Q 014600 189 VSTAKTHADLENQYRWIAYSSIFI 212 (422)
Q Consensus 189 ~~~~~g~~~~~~~~~~~~~i~~~i 212 (422)
..||++.+.+.++.
T Consensus 176 ----------~~g~~~~F~i~~i~ 189 (500)
T PRK09584 176 ----------KYGWSVAFALSVVG 189 (500)
T ss_pred ----------hhCHHHHHHHHHHH
Confidence 23788887776543
No 98
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.39 E-value=6.6e-11 Score=114.86 Aligned_cols=221 Identities=13% Similarity=0.048 Sum_probs=155.4
Q ss_pred HHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCccchh
Q 014600 46 YLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKV 124 (422)
Q Consensus 46 ~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~~~ 124 (422)
-+..++.+. |+|+.+.+++..+..+..++.-.+.|.+.||+|-||... .+.++..+-...+.. . ....+. +
T Consensus 35 ~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~-~s~~l~~IP~~~~~~-----a-~~~~~~-~ 106 (417)
T COG2223 35 PLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTI-LSMLLLLIPCLGLAF-----A-VTYPST-W 106 (417)
T ss_pred HHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHH-HHHHHHHHHHHHHHH-----H-ccCCch-H
Confidence 345566665 999999999999999999999999999999999988755 344444443222211 0 111222 2
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchHHHHHH
Q 014600 125 ETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRW 204 (422)
Q Consensus 125 ~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~~~~~~~~~ 204 (422)
. +++...+.+++-+-+ ....+..+...+ +++++.+.++.. .+|+|..+...+.++++...+ . ..|+.
T Consensus 107 ~---ll~~gll~G~~GasF-av~m~~~s~~fP-~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g-----~--~~w~~ 173 (417)
T COG2223 107 Q---LLVIGLLLGLAGASF-AVGMPNASFFFP-KEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFG-----F--LAWRN 173 (417)
T ss_pred H---HHHHHHHHhccccee-hcccccccccCC-hhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHh-----h--HHHHH
Confidence 2 333333455443322 334556777776 677899999987 889999998888877765432 1 14888
Q ss_pred HHHHHHHHHHHHHhhhhccccCcccccccCCCcchh-hhHHHHHHhHHHHHHHHHHHHHHHHHHhhhHHHHHHhhhccCc
Q 014600 205 IAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHAR-ISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRM 283 (422)
Q Consensus 205 ~~~i~~~i~~i~~~i~~~~~~E~~~~~~~~~~~~~~-~~~~~~~~n~~f~~~~~~~~~~~~~~~~~~~y~~~y~~~~~~l 283 (422)
...+..+..++..+..++..+|.++.++ .+++.+ .+++.++|||+.|.+.+.|+.+.-+.-+...++|.|++++.++
T Consensus 174 ~~~i~~~~l~v~~v~~~~~~~d~p~~r~--~~~~~~~~~~~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~ 251 (417)
T COG2223 174 VAGIYVVALAIAAVLAWLGMNDVPEHRA--SVKPQLPAQLKAVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGL 251 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCChhhhc--cccccchhHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 8887777777777777888888654221 122223 6788999999999999999998888888999999999999998
Q ss_pred cchhHh
Q 014600 284 GQSAKA 289 (422)
Q Consensus 284 ~~~~~~ 289 (422)
++...+
T Consensus 252 ~~~~Ag 257 (417)
T COG2223 252 SPVTAG 257 (417)
T ss_pred ChhhHH
Confidence 876543
No 99
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.34 E-value=2.7e-09 Score=108.69 Aligned_cols=157 Identities=14% Similarity=0.008 Sum_probs=112.2
Q ss_pred chhHHHHHHHHHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhccc-CCchhHHHHHHHHHHHHHHHhhcC
Q 014600 33 HMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRF-GHFKIWHGAGSVLVAVSFSSVFGG 110 (422)
Q Consensus 33 ~~~~~~~~~~~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~-Grrrp~ll~g~i~~~i~~~~lf~~ 110 (422)
.+.....++.+..+++.|+++. |+++.+++.+.........+..++.|+++||+ ||||. +++|.+..+++..++..
T Consensus 18 ~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~-iliG~il~~lg~lll~~- 95 (493)
T PRK15462 18 QIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMA-VMLGALLMAIGHVVLGA- 95 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHH-HHHHHHHHHHHHHHHHH-
Confidence 4556677777888999999987 99999999999999999999999999999998 99988 55788887777654431
Q ss_pred ccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCc-cchhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 014600 111 CMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNS-TSRVVLTSCRNAFTMVANLSLYAIAFIVFSV 189 (422)
Q Consensus 111 ~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~-~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~ 189 (422)
+ + ..... .+.. ..+..++.+.......++.+|+.+++ ++|.+..++.+...++|+.+++.+.+.+.+
T Consensus 96 --~----~-~~~~~---~~l~-l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~- 163 (493)
T PRK15462 96 --S----E-IHPSF---LYLS-LAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQE- 163 (493)
T ss_pred --h----h-cchhH---HHHH-HHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHh-
Confidence 1 1 11111 1111 11233445555556678899998754 478889999988899998888877655532
Q ss_pred ccCCCCCchHHHHHHHHHHHHHH
Q 014600 190 STAKTHADLENQYRWIAYSSIFI 212 (422)
Q Consensus 190 ~~~~g~~~~~~~~~~~~~i~~~i 212 (422)
..||++.+.+.++.
T Consensus 164 ---------~~Gw~~~F~iaaig 177 (493)
T PRK15462 164 ---------EYSWAMGFGLAAVG 177 (493)
T ss_pred ---------hhChHHHHHHHHHH
Confidence 23677777665443
No 100
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.34 E-value=3.6e-09 Score=102.36 Aligned_cols=230 Identities=14% Similarity=0.055 Sum_probs=144.5
Q ss_pred HHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCccch
Q 014600 45 TYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLK 123 (422)
Q Consensus 45 ~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~~ 123 (422)
--+.+.+.++ +++..+++.+....-....+.....|++.+|+|+|+- ++.|..+.+++..+ |+ | ++.....
T Consensus 33 diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~g-i~lgL~l~avg~~l-F~---p---Aa~~~~y 104 (422)
T COG0738 33 DILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAG-IVLGLLLYAVGAAL-FW---P---AASSKSY 104 (422)
T ss_pred hhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHH-HHHHHHHHHHHHHH-Hh---h---hhhhhhH
Confidence 3455666666 9999999999999999999999999999999999999 66788999988765 43 3 1122211
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCc-h----
Q 014600 124 VETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHAD-L---- 198 (422)
Q Consensus 124 ~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~~-~---- 198 (422)
-.++....+.+.+-+..++..++++..+.+++ +.+.-....+.+..+|.++++.++.-++..-...+..+ .
T Consensus 105 ---~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~-~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~ 180 (422)
T COG0738 105 ---GFFLVALFILASGIGLLETAANPYVTLLGKPE-SAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAI 180 (422)
T ss_pred ---HHHHHHHHHHHhhhHHHHhccchHHHHhCCch-hHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHH
Confidence 22222223567777889999999999987643 33333445556778888888777766654200000000 0
Q ss_pred ----HHHHHHHHHHHHHHHHHHHhhhhccccCcccccccCCCcchh-hhHHHHHHhHHHHHHHHHHHHHHHHHHhhhHHH
Q 014600 199 ----ENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHAR-ISWAYWFKKILYYQVALVYMLTRLVVNVSQAYL 273 (422)
Q Consensus 199 ----~~~~~~~~~i~~~i~~i~~~i~~~~~~E~~~~~~~~~~~~~~-~~~~~~~~n~~f~~~~~~~~~~~~~~~~~~~y~ 273 (422)
...+++...+.+.+.+++.+. ....|-+..+++++++.+.+ ....+++|||.++...+..++.--.......++
T Consensus 181 ~~~~~~~v~~pYl~~~~~lvll~v~-~~~~k~p~~~~~~~~~~~~~~~~~~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl 259 (422)
T COG0738 181 KGADASSVQFPYLILAGLLVLLAVL-ILLSKLPDLQVAAPSLGASGSAGLSSLFQNKHLRLGVLAIFLYVGAEVAIGSFL 259 (422)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHH-HHhccCCcCCcccccccccccchHHHHHhChHHHHHHHHHHHHHhHHHHHHHHH
Confidence 112445555444443333322 23333332222222222222 156889999998876666666545556778899
Q ss_pred HHHhhhccCccchh
Q 014600 274 AFYVINDLRMGQSA 287 (422)
Q Consensus 274 ~~y~~~~~~l~~~~ 287 (422)
+.|..+..+++...
T Consensus 260 ~~y~~~~~g~~~~~ 273 (422)
T COG0738 260 VSYLEELLGLNEQQ 273 (422)
T ss_pred HHHHHhcCCccHHH
Confidence 99999976765543
No 101
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.31 E-value=1.6e-10 Score=117.39 Aligned_cols=214 Identities=13% Similarity=0.014 Sum_probs=158.4
Q ss_pred CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCccchhhhHHHHHHHH
Q 014600 55 GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAA 134 (422)
Q Consensus 55 gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~~~~~~~~~~~~~ 134 (422)
++...+.+.+.++..+..++.+++.|++.||+.-.|- +....+...+..++..+ .. .+..|+..++
T Consensus 77 ~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~-l~~~~~~w~~~~~~~~~-------~~------s~~~~ialr~ 142 (495)
T KOG2533|consen 77 KLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKG-LSVSGILWGLFGFLTAA-------VH------SFPGLIALRF 142 (495)
T ss_pred chhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHH-HHHHHHHHHHHHHHHHH-------Hh------hhHHHHHHHH
Confidence 4566789999999999999999999999999984433 33333333322212110 11 1234455566
Q ss_pred HHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchHHHHHHHHHHHHHHHH
Q 014600 135 IFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGC 214 (422)
Q Consensus 135 l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~~~~~~~~~~~~i~~~i~~ 214 (422)
+.++..+...++...++..+.+ ++||+...++......+|+++++.+...+...-+ .....||+|.+++-+++.+
T Consensus 143 llGl~es~~wP~~~~~lg~wy~-~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~----~~~~~gW~~~FiI~G~i~~ 217 (495)
T KOG2533|consen 143 LLGLFESGGWPGVVAILGNWYG-KSERGLRMGIWYASASLGNIFGGLIAYGVFKLNG----SGGLAGWRWLFIIEGVITL 217 (495)
T ss_pred HHHHHhcccchHHHHHHHhhcC-hhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcC----CCCcCCceeehhHHHHHHH
Confidence 7888889888899999999876 7899999999999999999998888766554222 1235699999999999999
Q ss_pred HHHhhhhccccCcccc-----ccc----------C-----CCcchhhhHHHHHHhHHHHHHHHHHHHHHHHHHhhhHHHH
Q 014600 215 CFVGIFLSRTEEPRLK-----MGL----------R-----GNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLA 274 (422)
Q Consensus 215 i~~~i~~~~~~E~~~~-----~~~----------~-----~~~~~~~~~~~~~~n~~f~~~~~~~~~~~~~~~~~~~y~~ 274 (422)
+..+++++.+|+.|.+ ++| + +++.....+++.+|++..|.+.+++++.....++...|.|
T Consensus 218 ~~gi~~f~~lp~~P~~~~fl~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~a~~dp~vw~~~l~~~~~~lv~~~~~~~lp 297 (495)
T KOG2533|consen 218 VLGIVVFFFLPDNPSKAWFLTDEEKELVVERLRESPSGGIENKFKWKGFKEALKDPGVWPFSLCYFFLKLVNYGFSYWLP 297 (495)
T ss_pred HHHheEEEEecCChhhccccchHHHHHHHHHHHhccCCCcccccCHHHHHHHHhchhHHHHHHHHHHHhhccccHHHHHH
Confidence 9999999998876541 000 0 0112345678899999999999999999999999999999
Q ss_pred HHhhhccCccchh
Q 014600 275 FYVINDLRMGQSA 287 (422)
Q Consensus 275 ~y~~~~~~l~~~~ 287 (422)
.|+.++.+++...
T Consensus 298 l~l~~~~~~s~~~ 310 (495)
T KOG2533|consen 298 LYLKSNGGYSELQ 310 (495)
T ss_pred HHHHcCCCcChHH
Confidence 9999966665544
No 102
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=99.28 E-value=1.1e-11 Score=120.90 Aligned_cols=160 Identities=17% Similarity=0.175 Sum_probs=125.5
Q ss_pred eeeeeeeccchhHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhc----ccCCchhHHHHHHHH
Q 014600 24 WSVLYYGSGHMLNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELID----RFGHFKIWHGAGSVL 99 (422)
Q Consensus 24 ~~~~~y~~g~~~~~~~~~~~~~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsD----r~Grrrp~ll~g~i~ 99 (422)
++.+.-..-.++.++.+..-.+|+++|...+|++-.+.+.+...+++...+.+|+.|..|| |||||||++..+.+.
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~ 111 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLL 111 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHH
Confidence 5667777778899999999999999999999999999999999999999999999999999 599999999999999
Q ss_pred HHHHHHHhhc-CccCccccCCccc---hhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHH
Q 014600 100 VAVSFSSVFG-GCMPCRILSTSTL---KVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVA 175 (422)
Q Consensus 100 ~~i~~~~lf~-~~~p~~~~~~~~~---~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig 175 (422)
.+++.+++-+ +.+-..+.++... ....+.+++-.-+..+.....+.|..++..|+..+++|+++.+++...+..+|
T Consensus 112 i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avG 191 (498)
T KOG0637|consen 112 IAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVG 191 (498)
T ss_pred HHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhc
Confidence 8888765422 1000001111111 12333333333467888888999999999999987777776999999999999
Q ss_pred HHHHHHHH
Q 014600 176 NLSLYAIA 183 (422)
Q Consensus 176 ~~l~~~~~ 183 (422)
+.+++..+
T Consensus 192 nvLGY~~g 199 (498)
T KOG0637|consen 192 NVLGYALG 199 (498)
T ss_pred ceeeeecc
Confidence 99887665
No 103
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.27 E-value=5.1e-09 Score=104.52 Aligned_cols=149 Identities=8% Similarity=-0.005 Sum_probs=110.9
Q ss_pred CCceeeeeeeccchhHHHHHHHHHHHHHHHHHHh-CCChhH-HHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHH
Q 014600 21 VGRWSVLYYGSGHMLNDITAACWFTYLLLFLTDI-GLSPRG-AAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSV 98 (422)
Q Consensus 21 l~~~~~~~y~~g~~~~~~~~~~~~~~l~~f~t~~-gls~~~-~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i 98 (422)
++.|.++..-+.-+|.-.-.=..-++...++.+. |++..+ .|.+..+.....++...+.|+++||+|-||. +..+.+
T Consensus 22 ~~~W~~~~~~lC~fGF~~e~R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~v-L~l~~l 100 (511)
T TIGR00806 22 LKSWRVLVLYLCFYGFMAQFRPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPV-LVLQAL 100 (511)
T ss_pred hcchhHHHHHHHHHHHHHHhhchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHH-HHHHHH
Confidence 4556666544443332222222336777788876 999999 9999999999999999999999999999876 556666
Q ss_pred HHHHHHHHhhcCccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHH
Q 014600 99 LVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLS 178 (422)
Q Consensus 99 ~~~i~~~~lf~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l 178 (422)
...+...++-+ . .+ +..+.++.++++++.+... ++...+..+.+ ++||+++.++...+..+|.++
T Consensus 101 ~Wsl~t~L~~f-------a--~S----l~~L~i~R~llGvaEA~~~-A~~syI~~WfP-~kER~ratsi~~sg~~vG~~I 165 (511)
T TIGR00806 101 SFVCVWLLLLL-------G--TS----VWHMQLMEVFYSVTMAARI-AYSSYIFSLVP-PSRYQRAAAYSRAAVLLGVFL 165 (511)
T ss_pred HHHHHHHHHHH-------H--HH----HHHHHHHHHHHHHHHHHHH-HHHHHHHHHCC-HHHHHHHHHHHHHHHHHHHHH
Confidence 66666544321 1 11 2334455568899888777 89999999987 799999999999999999998
Q ss_pred HHHHHHH
Q 014600 179 LYAIAFI 185 (422)
Q Consensus 179 ~~~~~~~ 185 (422)
++.++..
T Consensus 166 a~~L~ql 172 (511)
T TIGR00806 166 SSVLGQL 172 (511)
T ss_pred HHHHHHH
Confidence 8877765
No 104
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.24 E-value=1.2e-11 Score=121.07 Aligned_cols=186 Identities=12% Similarity=0.051 Sum_probs=135.8
Q ss_pred CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCccchhhhHHHHHHHH
Q 014600 55 GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAA 134 (422)
Q Consensus 55 gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~~~~~~~~~~~~~ 134 (422)
+++....|++..+..+...+..|+.|++.||+.|++. +..|..++.++.++.- + .+.. ..+++.+.
T Consensus 64 ni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v-~~vG~~iW~~Av~~~~-------f---s~~F---wq~~l~R~ 129 (493)
T KOG1330|consen 64 NISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRV-IAVGIFIWTLAVFASG-------F---SNHF---WQVLLCRG 129 (493)
T ss_pred CCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceE-EeeHHHHHHHHHHHHH-------H---HHHH---HHHHHHHH
Confidence 8999999999999999999999999999999999988 6678888887765421 1 1222 22334445
Q ss_pred HHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchHHHHHHHHHHHHHHHH
Q 014600 135 IFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGC 214 (422)
Q Consensus 135 l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~~~~~~~~~~~~i~~~i~~ 214 (422)
+.+++-+.+.....++++|+++ +++|++..++-+....+|..++..++.-+ ... ...|||.+...+++++
T Consensus 130 ~vGiGeAs~~~ia~s~IaD~f~-~~~Rs~~~~ify~~ipvGsglG~vvgs~v-a~~--------~~~Wr~af~~~avl~v 199 (493)
T KOG1330|consen 130 FVGIGEASYSPIAPSLIADSFP-DDKRSRVLGIFYFAIPVGSGLGYVVGSVV-ASL--------TFWWRWAFRGSAVLGV 199 (493)
T ss_pred HhccchhhhcccchhHhhhcCc-chhhhHHHHHhhhhcccccceeEEeeeee-ccC--------ccceEEEEEeehHHHH
Confidence 7889999999889999999987 57899999999999998887776554322 211 1128888888889999
Q ss_pred HHHhhhhccccCcccc-ccc--CC------CcchhhhHHHHHHhHHHHHHHHHHHHHHH
Q 014600 215 CFVGIFLSRTEEPRLK-MGL--RG------NSHARISWAYWFKKILYYQVALVYMLTRL 264 (422)
Q Consensus 215 i~~~i~~~~~~E~~~~-~~~--~~------~~~~~~~~~~~~~n~~f~~~~~~~~~~~~ 264 (422)
++.++.+++++|++.. .++ .+ ..+..++++.+.|||.+....+.+...+.
T Consensus 200 i~~~L~~~f~~eP~rga~~~~~~~~~~~~~~ts~~kDl~~l~~~~v~v~~sl~~~a~~f 258 (493)
T KOG1330|consen 200 IVGLLVFLFVREPERGARDEVDGENKMVKPFTSVWKDLKVLAKIKVFVLSSLGIIAAQF 258 (493)
T ss_pred HHHHHHHhhccCcccccccccccCCcCCCCccchHHHHHHHHccCceeeehHHHHHHHH
Confidence 9999999999997642 111 11 12344666777888876544444444333
No 105
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.17 E-value=4.7e-09 Score=107.69 Aligned_cols=277 Identities=15% Similarity=0.105 Sum_probs=182.2
Q ss_pred hCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCccchhhhHHHHHHH
Q 014600 54 IGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFA 133 (422)
Q Consensus 54 ~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~~~~~~~~~~~~ 133 (422)
.+.+..+++++.++..-...+..|+.+.++||+|.|.. .+.|+++.++++++..+ +. +.+. .|+...
T Consensus 76 f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v-~i~G~~v~~~g~~lssF-------~~--~i~~---l~lt~g 142 (509)
T KOG2504|consen 76 FGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTV-MIAGGLVAALGLLLSSF-------AT--SLWQ---LYLTFG 142 (509)
T ss_pred hCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHH-HHHHHHHHHHHHHHHHH-------Hh--hHHH---HHHHHH
Confidence 38888889999999999999999999999999999877 67899999998876432 21 2222 233334
Q ss_pred HHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchHHHHHHHHHHHHHHH
Q 014600 134 AIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIG 213 (422)
Q Consensus 134 ~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~~~~~~~~~~~~i~~~i~ 213 (422)
++.+++.++...|....+..++ +++|+.++++...+..+|.++.+.+.-.+++ ..|||+...+.+.+.
T Consensus 143 vi~G~G~~~~~~paiviv~~YF--~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~----------~~G~r~~~l~~~~~~ 210 (509)
T KOG2504|consen 143 VIGGLGLGLIYLPAVVILGTYF--EKKRALATGIAVSGTGVGTVVFPPLLKYLLS----------KYGWRGALLIFGGIS 210 (509)
T ss_pred HHhhccchhhhcchhhhhhhHh--HHHHHHHHhhhhccCCcceeeHHHHHHHHHH----------HhCcHHHHHHHHHHH
Confidence 5789999999999999999887 5789999999998888888776544333332 357888877777666
Q ss_pred HHHHhhhhccccC---------------------------ccc-cccc--C-------------CC--c--chhhhH---
Q 014600 214 CCFVGIFLSRTEE---------------------------PRL-KMGL--R-------------GN--S--HARISW--- 243 (422)
Q Consensus 214 ~i~~~i~~~~~~E---------------------------~~~-~~~~--~-------------~~--~--~~~~~~--- 243 (422)
+-+.......-|. +.. ++++ . ++ . ..+...
T Consensus 211 l~~~~~~~~~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (509)
T KOG2504|consen 211 LNVLVAGALLRPLSPPKKPNEEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRNSPLQAFLSML 290 (509)
T ss_pred HHHHHHHHHcCCCCcCCCchhhhhhccccccccccccccccccccCCCCCCcccccchhhhhhCCccccccchhhhhhhh
Confidence 5444433333220 000 0000 0 00 0 111122
Q ss_pred -HHHHHhHHHHHHHHHHHHHHHHHHhhhHHHHHHhhhccCccchhHh--------------HHHH-----------HHHH
Q 014600 244 -AYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKA--------------LVPA-----------IIYI 297 (422)
Q Consensus 244 -~~~~~n~~f~~~~~~~~~~~~~~~~~~~y~~~y~~~~~~l~~~~~~--------------~iP~-----------~~~~ 297 (422)
.+++|+|.|+.+.+...+...+......|++.|.. +.+.+....+ .++. .++.
T Consensus 291 d~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~-~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~ 369 (509)
T KOG2504|consen 291 DLSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAK-SLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFL 369 (509)
T ss_pred hHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHH
Confidence 47889999988888888888888888999999988 4455543321 0000 0111
Q ss_pred HHHHHHHHH----H-------------HHH----------hhhhhhhhcCccccccceehhhHHHHHHHHHHHHHHHHHh
Q 014600 298 CSFIVSILL----Q-------------VTG----------ISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSY 350 (422)
Q Consensus 298 ~~~~~~~~~----~-------------v~~----------~~~~~~~~g~r~~g~~~~~s~~~~~~K~~~a~~~~i~g~~ 350 (422)
++.+...+. . ..| .....+..|..+-.. -+|...+.+-++.-+|.-+.|++
T Consensus 370 ~~ll~~gl~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~--a~Gl~l~~~gi~~l~gpPiag~~ 447 (509)
T KOG2504|consen 370 LTLLIAGLARLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSN--AYGLLLLFQGIGALVGPPIAGLL 447 (509)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcch--HHHHHHHHhHHHHHcCcccceee
Confidence 111111111 0 001 112456667666665 78899999999999999999988
Q ss_pred HhhCC-Ccc
Q 014600 351 QSMSP-TVL 358 (422)
Q Consensus 351 l~~~G-y~~ 358 (422)
.+..| |+.
T Consensus 448 ~d~tg~Y~~ 456 (509)
T KOG2504|consen 448 YDITGNYDH 456 (509)
T ss_pred eeccCCeee
Confidence 88888 764
No 106
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.16 E-value=2e-09 Score=108.52 Aligned_cols=188 Identities=12% Similarity=-0.022 Sum_probs=128.3
Q ss_pred eeeeccchhHHHHHHHHHHHHHHHHHHhCCC--------hhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHH
Q 014600 27 LYYGSGHMLNDITAACWFTYLLLFLTDIGLS--------PRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSV 98 (422)
Q Consensus 27 ~~y~~g~~~~~~~~~~~~~~l~~f~t~~gls--------~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i 98 (422)
+.+....+...........|++.|..+.|.+ ....|.++++..+...+..++.|+++||+||||. ++.+.+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~-l~~~~~ 289 (418)
T TIGR00889 211 AIFFFFSMLLGAPLQITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKV-MLLSLV 289 (418)
T ss_pred eeHHHHHHHHHhHHHHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHH-HHHHHH
Confidence 3444444444444445557778888776544 4678999999999999999999999999999887 556777
Q ss_pred HHHHHHHHhhcCccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHH-HHHHHHHH
Q 014600 99 LVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRN-AFTMVANL 177 (422)
Q Consensus 99 ~~~i~~~~lf~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~-~~~~ig~~ 177 (422)
..++.+.++.. + .++ .. ......+..++.+++++....+...++.|..+ +++|++..++.+ ....+|..
T Consensus 290 ~~~v~~~l~~~---~---~~~--~~-~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p-~~~~g~~~g~~~~~~~~lg~~ 359 (418)
T TIGR00889 290 AWALRFGFFAY---G---DPE--YF-GYALLFLSMIVYGCAFDFFNISGSVFVEKEVP-VHIRASAQGLFTLMCNGFGSL 359 (418)
T ss_pred HHHHHHHHHHH---c---Ccc--hh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHHhhHHH
Confidence 76666543331 0 011 10 11112222346777777777777788888876 689999999986 55678888
Q ss_pred HHHHHHHHHHhhccCCCCCchHHHHHHHHHHHHHHHHHHHhhhhccccCccc
Q 014600 178 SLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRL 229 (422)
Q Consensus 178 l~~~~~~~l~~~~~~~g~~~~~~~~~~~~~i~~~i~~i~~~i~~~~~~E~~~ 229 (422)
+++.+.+.+.+..+. +...+|++.+.+.+++.+++.+++++..||+..
T Consensus 360 iGp~l~G~l~~~~g~----~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~~ 407 (418)
T TIGR00889 360 LGYILSGVMVEKMFA----YGTFDWQTMWLFFAGYIAILAVLFMIFFKYSHN 407 (418)
T ss_pred HHHHHHHHHHHHhcc----ccCCchHHHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 888888777765421 111368888877777777777888888888643
No 107
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.08 E-value=1.2e-07 Score=95.75 Aligned_cols=207 Identities=10% Similarity=-0.019 Sum_probs=133.1
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCccchhhhHHHHHHHHHHHHH
Q 014600 60 GAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVG 139 (422)
Q Consensus 60 ~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~ 139 (422)
..+.+.++..+..+++..+.|.++||+|||.. ++...+...++..++.. + ... + .+-.+++-+++.++.
T Consensus 61 lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~-l~~~~~l~~~~~~~~~~-s---~~~---~---~~e~li~GR~i~Gl~ 129 (485)
T KOG0569|consen 61 LWSLIVSIFFIGGMIGSFSSGLLADRFGRKNA-LLLSNLLAVLAALLMGL-S---KSA---P---SFEMLILGRLIVGLA 129 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcchHH-HHHHHHHHHHHHHHHHH-H---HHh---h---hHHHHHHHHHHHHHH
Confidence 35666778888899999999999999999966 44555554444333221 0 001 1 122344445677777
Q ss_pred HHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchHHHHHHHHHHHHHHHHHHHhh
Q 014600 140 WAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGI 219 (422)
Q Consensus 140 ~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~~~~~~~~~~~~i~~~i~~i~~~i 219 (422)
.+.......-++.|..| .+-|+.++.....+..+|.+++..++.|-+ +| ....|.+......+++++.. +
T Consensus 130 ~gl~~~~~pmyl~E~sP-~~~RG~~g~~~~~~~~~g~ll~~~~~l~~i--lG------t~~~W~~l~~~~~i~~~~~l-~ 199 (485)
T KOG0569|consen 130 CGLSTGLVPMYLTEISP-KNLRGALGTLLQIGVVIGILLGQVLGLPSL--LG------TEDLWPYLLAFPLIPALLQL-A 199 (485)
T ss_pred hHHHHHHHHHHHhhcCh-hhhccHHHHHHHHHHHHHHHHHHHHccHHh--cC------CCcchHHHHHHHHHHHHHHH-H
Confidence 77777777778999987 578999999999999999999877776633 22 23578887776666666543 4
Q ss_pred hhccccCccc-----ccc--------------c--C------------CCc--chhhhHHHHHHhHHHHHHH----HHHH
Q 014600 220 FLSRTEEPRL-----KMG--------------L--R------------GNS--HARISWAYWFKKILYYQVA----LVYM 260 (422)
Q Consensus 220 ~~~~~~E~~~-----~~~--------------~--~------------~~~--~~~~~~~~~~~n~~f~~~~----~~~~ 260 (422)
...++||.|. +.+ + + ++. +.+.++++++|||..++-. .+.+
T Consensus 200 ~l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~ 279 (485)
T KOG0569|consen 200 LLPFLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSF 279 (485)
T ss_pred HHhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHHHHHH
Confidence 4556777542 000 0 0 000 1233578999998776532 2333
Q ss_pred HHHHHHHhhhHHHHHHhhhccCccchh
Q 014600 261 LTRLVVNVSQAYLAFYVINDLRMGQSA 287 (422)
Q Consensus 261 ~~~~~~~~~~~y~~~y~~~~~~l~~~~ 287 (422)
..++.......+|.+.+..+.|++...
T Consensus 280 ~qq~sGi~ai~~Yst~i~~~aG~~~~~ 306 (485)
T KOG0569|consen 280 AQQFSGINAIFFYSTSIFKTAGFTPEE 306 (485)
T ss_pred HHHhcCcceeHHHHHHHHHHcCCCHHH
Confidence 344444455778888888888877653
No 108
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.00 E-value=1.6e-08 Score=100.91 Aligned_cols=170 Identities=12% Similarity=0.052 Sum_probs=109.4
Q ss_pred HHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCcc
Q 014600 36 NDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCR 115 (422)
Q Consensus 36 ~~~~~~~~~~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~ 115 (422)
....+.....+++.|+.+.|.++.++|...++..+...+..++.|+++||+||||.. ..+....+++..++.. .|
T Consensus 217 ~~~~~~~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~-~~~~~l~~~~~~~~~~--~~-- 291 (393)
T PRK09705 217 INGGYASLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLL-MLALVLQLVGFCGFIW--LP-- 291 (393)
T ss_pred HHHHHHHHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHH-HHHHHHHHHHHHHHHH--cc--
Confidence 344445566788999887799999999999999999999999999999999998874 4555555555443321 12
Q ss_pred ccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCC
Q 014600 116 ILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTH 195 (422)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~ 195 (422)
. +.. . .. . .+.+++.+.......+...+..+++++|++..+..+....++..+++.+.+.+.+..+
T Consensus 292 ---~-~~~-~-~~-~---~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g---- 357 (393)
T PRK09705 292 ---L-QLP-V-LW-A---MVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISG---- 357 (393)
T ss_pred ---c-hHH-H-HH-H---HHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC----
Confidence 1 111 1 11 1 1234444444334444555655556788999998888888888888877777766432
Q ss_pred CchHHHHHHHHHHHHHHHHHHHhhhhccccCccc
Q 014600 196 ADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRL 229 (422)
Q Consensus 196 ~~~~~~~~~~~~i~~~i~~i~~~i~~~~~~E~~~ 229 (422)
+|...+.+..+.+.+...+.....+|++.
T Consensus 358 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (393)
T PRK09705 358 -----NYLMDWAFHALCVVGLMIITLRFAPARFP 386 (393)
T ss_pred -----CchHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 24444444444444444444556667553
No 109
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.99 E-value=6e-08 Score=100.28 Aligned_cols=153 Identities=17% Similarity=0.133 Sum_probs=90.2
Q ss_pred HHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCccchh
Q 014600 45 TYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKV 124 (422)
Q Consensus 45 ~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~~~ 124 (422)
+-++.-++|+|-+ ....++.....+..++..|+.|++||.||||.. ++.+.++..++.+..-. +++.
T Consensus 65 ~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~-~i~g~~l~vvG~Iv~at-------A~~~---- 131 (599)
T PF06609_consen 65 SILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYF-FIIGSLLGVVGSIVCAT-------AQNM---- 131 (599)
T ss_pred HHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHH-HHHHHHHHHhHHHHhhc-------CCcH----
Confidence 3445556667443 334455666777889999999999999999876 56788888888765432 1221
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHh-hccCCCCCchHHHHH
Q 014600 125 ETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFS-VSTAKTHADLENQYR 203 (422)
Q Consensus 125 ~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~-~~~~~g~~~~~~~~~ 203 (422)
-.|+.-..+++++.+..... ...++|+.++ +.|.....+.. +..+.... .++.+. .+. ...+||
T Consensus 132 --~~~iag~~l~GvgaG~~~~~-~~~isEl~p~-k~R~~~~~~~~----~~~i~~~~-~~~~ia~~~~------~~~~WR 196 (599)
T PF06609_consen 132 --NTFIAGMVLYGVGAGVQELA-ALAISELVPN-KWRGLGLAIAS----IPFIITTW-ISPLIAQLFA------AHSGWR 196 (599)
T ss_pred --HHHHHHHHHHHHhhHHHHHH-HHHHHHhccc-chhhhHhHHHH----HHHHhhhc-ccHHHHHHhc------cCCCcc
Confidence 12333345678877666554 3447898864 55654333222 22222111 223333 221 134899
Q ss_pred HHHHHHHHHHHHHHhhhhcccc
Q 014600 204 WIAYSSIFIGCCFVGIFLSRTE 225 (422)
Q Consensus 204 ~~~~i~~~i~~i~~~i~~~~~~ 225 (422)
|.+++.+++..+..++++++.+
T Consensus 197 w~~~~~~i~~~i~~vl~~~fY~ 218 (599)
T PF06609_consen 197 WIFYIFIIWSGIALVLIFFFYF 218 (599)
T ss_pred hHHHHHHHHHHHHHHHHHHHhC
Confidence 9988887776666555544443
No 110
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.98 E-value=5.5e-08 Score=93.32 Aligned_cols=161 Identities=11% Similarity=-0.031 Sum_probs=101.5
Q ss_pred CCCCCCCCCCCceeeeeeeccchhHHHHHHHHHH---HHHHHHHH---h-----CCChhHHHHHHHHHHHHhhhhhhhhh
Q 014600 12 ENDDSFTQPVGRWSVLYYGSGHMLNDITAACWFT---YLLLFLTD---I-----GLSPRGAAAVMLSGQIADGFATIFIG 80 (422)
Q Consensus 12 ~~~~~~~~~l~~~~~~~y~~g~~~~~~~~~~~~~---~l~~f~t~---~-----gls~~~~g~i~~i~~l~~ai~~p~~G 80 (422)
++++.+++..+.++.-.-.+..+..-+....... |...-..| . +.+....|.+=+...+...+++|.+|
T Consensus 10 ~~kk~q~~g~P~~~~~~v~vv~~~~ll~l~~~~~L~~~~~~~V~~F~~a~~~~~~~~~~yaGflGSsF~ilQ~~sS~~~G 89 (451)
T KOG2615|consen 10 LRKKEQKRGFPALALDVVAVVSLSLLLPLLLVSSLYPFVVFMVRDFNIAIGEPDGASVFYAGFLGSSFSILQFISSPLWG 89 (451)
T ss_pred cchHHHhcCCchhhcceeeeeehhhhhhHhhccchhHHHHHhhHHHHHhhCCcccccchhhhhHhhHHHHHHHHhhhhhh
Confidence 4444466667777655555554444333322222 11111111 1 33567788888999999999999999
Q ss_pred hhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccc
Q 014600 81 ELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTS 160 (422)
Q Consensus 81 ~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~e 160 (422)
.+|||+||| |.++.|.+..+++. ++|. .+ . .+..+++.+++.++.-+- .-+..|+++|..+ +|+
T Consensus 90 ~~SD~yGRk-pvll~c~~~va~s~-ll~~------~S----~--~F~afv~aR~l~Gi~kgn-l~v~rAiisdV~s-ek~ 153 (451)
T KOG2615|consen 90 CLSDRYGRK-PVLLACLIGVALSY-LLWA------LS----R--NFAAFVLARFLGGIFKGN-LSVIRAIISDVVS-EKY 153 (451)
T ss_pred hhhhhhCch-HHHHHHHHHHHHHH-HHHH------HH----H--HHHHHHHHHHhhhhccCc-hHHHHHHHHhhcC-hhh
Confidence 999999996 55888888888754 3342 11 1 122333223455554443 3456899999987 589
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 014600 161 RVVLTSCRNAFTMVANLSLYAIAFIVFS 188 (422)
Q Consensus 161 R~~l~~~~~~~~~ig~~l~~~~~~~l~~ 188 (422)
|.+..+.-.....+|-++++.+++-+..
T Consensus 154 r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 154 RPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred ccceeeeeehhhhcchhhcchhhhHHHh
Confidence 9998888777788888888877755544
No 111
>PTZ00207 hypothetical protein; Provisional
Probab=98.98 E-value=9.6e-08 Score=99.18 Aligned_cols=162 Identities=11% Similarity=0.112 Sum_probs=106.6
Q ss_pred HHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCccchh
Q 014600 45 TYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKV 124 (422)
Q Consensus 45 ~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~~~ 124 (422)
.+.+..-.+.|++..+++++..++... .+..++.|+++||+|+|+. ++++.+..+++..+++. ++. +.. ..+.+
T Consensus 48 v~s~~L~~~lgls~~~l~~i~svg~~~-g~~~lp~G~L~Dr~G~R~v-llig~ll~~iG~ll~al-a~~-~~i-~~s~~- 121 (591)
T PTZ00207 48 LISGAMQARYNLTQRDLSTITTVGIAV-GYFLLPYSFIYDYLGPRPI-FVLSMTVFCLGTLLFAL-TFQ-EVI-EGSVV- 121 (591)
T ss_pred HHHHHHHHHhCcCHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCcHHH-HHHHHHHHHHHHHHHHH-Hhc-ccc-cCcHH-
Confidence 334443333499999999999886555 4567778999999999887 55788888888766553 111 000 01111
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchHHHHHH
Q 014600 125 ETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRW 204 (422)
Q Consensus 125 ~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~~~~~~~~~ 204 (422)
. +.+..++.+.+.+..+++......++. +++|+++.++...+.++|+.+.+.+...++. .+|++
T Consensus 122 ~---l~l~r~l~G~G~~~~~~~~~~~i~~~F--p~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~-----------~~~~~ 185 (591)
T PTZ00207 122 R---LSVYNGLMTLGCMLFDLGAVVTVLSVF--PSNRGAVVAIMKTFTGLGSAILGSIQLAFFS-----------DNTSA 185 (591)
T ss_pred H---HHHHHHHHHHHHHHHHHHHHHHHHHhC--hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------HhHHH
Confidence 1 222234566776766666677777776 4789999999999988888654433222221 24566
Q ss_pred HHHHHHHHHHHHHhhhhccccCcc
Q 014600 205 IAYSSIFIGCCFVGIFLSRTEEPR 228 (422)
Q Consensus 205 ~~~i~~~i~~i~~~i~~~~~~E~~ 228 (422)
.+++.++++++..++++..+++++
T Consensus 186 ~fl~l~vl~~vv~ll~~~~vr~p~ 209 (591)
T PTZ00207 186 YFFFLMSFALVVGILAIVFMRLPP 209 (591)
T ss_pred HHHHHHHHHHHHHHHHHhheeCCc
Confidence 677777777777777777777764
No 112
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=98.97 E-value=4.7e-08 Score=100.53 Aligned_cols=171 Identities=15% Similarity=0.095 Sum_probs=97.2
Q ss_pred HHHHHHHHHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCc
Q 014600 36 NDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPC 114 (422)
Q Consensus 36 ~~~~~~~~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~ 114 (422)
....+.....|+|.|+++. |.+....+.+.....+...+..|+.|+++||+|||+.. ..+.+...+....++. .
T Consensus 262 ~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~-~~~~~~~~~~~~~~~~--~-- 336 (490)
T PRK10642 262 TNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFV-ILGSVALFVLAIPAFI--L-- 336 (490)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH-HHHHHHHHHHHHHHHH--H--
Confidence 3445555667899999887 99998888888888888889999999999999999874 4454433322222121 0
Q ss_pred cccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCC
Q 014600 115 RILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKT 194 (422)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g 194 (422)
....+.... .+..++.+++++.......++.+++.+ ++.|++..++.+....+++.+++.+.+.+.+..
T Consensus 337 --~~~~~~~~~----~~~~~~~g~~~~~~~g~~~~~~~~~~p-~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~---- 405 (490)
T PRK10642 337 --INSNVIGLI----FAGLLMLAVILNCFTGVMASTLPAMFP-THIRYSALAAAFNISVLVAGLTPTLAAWLVEST---- 405 (490)
T ss_pred --HhCCCHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHCC-CccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh----
Confidence 001111111 111223445455455556677788876 678998777643334444445444443333211
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHhhhhccccCcc
Q 014600 195 HADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPR 228 (422)
Q Consensus 195 ~~~~~~~~~~~~~i~~~i~~i~~~i~~~~~~E~~ 228 (422)
.+|+..+....+.++++.+. .++.||++
T Consensus 406 -----~~~~~~~~~~~~~~~i~~~~-~~~~pes~ 433 (490)
T PRK10642 406 -----QNLMMPAYYLMVVAVIGLIT-GVTMKETA 433 (490)
T ss_pred -----CCchHHHHHHHHHHHHHHHH-HHHhcccc
Confidence 12343333333444443333 33457865
No 113
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=98.94 E-value=1.4e-08 Score=103.74 Aligned_cols=169 Identities=8% Similarity=-0.030 Sum_probs=97.5
Q ss_pred HHHHHHHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHH-HhhcCccCcc
Q 014600 38 ITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFS-SVFGGCMPCR 115 (422)
Q Consensus 38 ~~~~~~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~-~lf~~~~p~~ 115 (422)
..+.....++|.|+++. |+++.+++...++..+...+..++.|+++||+||||.... +.....++.. +++ +
T Consensus 272 ~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~-~~~~~~~~~~~~~~----~-- 344 (467)
T PRK09556 272 IVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVA-CIALALIIFTLGVY----Q-- 344 (467)
T ss_pred HHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHH-HHHHHHHHHHHHHH----H--
Confidence 33334567889999887 9999999999999999999999999999999999887443 3222222221 111 1
Q ss_pred ccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHH-HHHHHHHHHHHHHhh-ccCC
Q 014600 116 ILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMV-ANLSLYAIAFIVFSV-STAK 193 (422)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~i-g~~l~~~~~~~l~~~-~~~~ 193 (422)
...+.... ++ ...+.+.+......+..+...|..+ +++|+++.++.+...++ |..+++.+.+.+.+. ..+.
T Consensus 345 --~~~~~~~~---~~-~~~~~G~~~~~~~~~~~~~~~~~~p-~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~ 417 (467)
T PRK09556 345 --HATSEYMY---LA-SLFALGFLVFGPQLLIGVAAVGFVP-KKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGT 417 (467)
T ss_pred --hcCcHHHH---HH-HHHHHHHHHhhHHHHHHHHHHhhcc-hhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhccccccc
Confidence 01111111 11 1112332221112222345557765 67899999998877775 556666555555541 0000
Q ss_pred C-CCchHHHHHHHHHHHHHHHHHHHhhh
Q 014600 194 T-HADLENQYRWIAYSSIFIGCCFVGIF 220 (422)
Q Consensus 194 g-~~~~~~~~~~~~~i~~~i~~i~~~i~ 220 (422)
. .+....+|+..+.+..+..+++.++.
T Consensus 418 ~~~~~~~~~~~~~f~~~~~~~~~~~~~~ 445 (467)
T PRK09556 418 PIFGYTLTGWAGTFAALDIAAIGCICLM 445 (467)
T ss_pred ccccccccChHHHHHHHHHHHHHHHHHH
Confidence 0 00012467777776655555544333
No 114
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=98.93 E-value=8.1e-08 Score=96.39 Aligned_cols=170 Identities=11% Similarity=0.049 Sum_probs=112.0
Q ss_pred HHHHHh--CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCC-chhHHHHHHHHHHHHHHHhhcCccCccccCCccchhh
Q 014600 49 LFLTDI--GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGH-FKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVE 125 (422)
Q Consensus 49 ~f~t~~--gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Gr-rrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~~~~ 125 (422)
+|..+. +.++...|++....++..++..|+.|+++.|.|+ ||| ++.|.+...++-.+ +. ++. ..++...++
T Consensus 59 pYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~P-li~s~ii~~~g~ll-Y~-~l~--~~~~~~~y~- 132 (488)
T KOG2325|consen 59 PYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKP-LIVSFLIAIIGNLL-YL-ALA--YVPNGVKYL- 132 (488)
T ss_pred hhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccC-HHHHHHHHHHHHHH-HH-HHH--hcccchHHH-
Confidence 566664 7788899999999999999999999999999886 889 66788888877543 31 111 111211121
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCC----CchHHH
Q 014600 126 TISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTH----ADLENQ 201 (422)
Q Consensus 126 ~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~----~~~~~~ 201 (422)
.++.+++.|++.+.. ..+.+..++-+. .++|.|+.+....+..+|.++|+.+. +.+..++..|. +..-+.
T Consensus 133 ---mL~~R~l~Gvg~~n~-a~lR~Y~a~~s~-~~dR~rA~a~~~~~~vlg~ilGp~~q-~~f~~Lg~~G~~i~~~~~~n~ 206 (488)
T KOG2325|consen 133 ---MLVARILTGVGVGNF-AVLRAYIADAST-VEDRPRAFAATSGGFVLGIILGPTIQ-LAFTPLGEKGFMILPGLIFNM 206 (488)
T ss_pred ---HHHHHHHcCcCcccH-HHHHHHHHhccC-ccchHHHHHHhhhHHHHHHHHhHHHH-HHHhhhcCCceEEcCcceEEe
Confidence 222234666665543 346777777665 67899888887777777777777665 44444443221 111234
Q ss_pred HHHHHHHHHHHHHHHHhhhhccccCcccc
Q 014600 202 YRWIAYSSIFIGCCFVGIFLSRTEEPRLK 230 (422)
Q Consensus 202 ~~~~~~i~~~i~~i~~~i~~~~~~E~~~~ 230 (422)
|....++.+++.++..++.++..||.+.+
T Consensus 207 YTap~w~m~i~~i~~~v~i~~~f~E~~~~ 235 (488)
T KOG2325|consen 207 YTAPAWLMAILWIIYIVIILFFFKEVYRG 235 (488)
T ss_pred cchHHHHHHHHHHHHHHHHHhheeecccC
Confidence 56666777777777777777788886543
No 115
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=98.90 E-value=3e-08 Score=99.10 Aligned_cols=135 Identities=13% Similarity=0.095 Sum_probs=95.7
Q ss_pred HHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccC
Q 014600 39 TAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILS 118 (422)
Q Consensus 39 ~~~~~~~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~ 118 (422)
.......++|.|+.+.|.++...|.+.....+...+..++.|+++||+||||... .+.+..+++...+.. .+
T Consensus 235 ~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~-~~~~~~~~~~~~~~~-------~~ 306 (406)
T PRK11551 235 VLYFLLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVL-LIYAGILASLAALAA-------AP 306 (406)
T ss_pred HHHHHHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH-HHHHHHHHHHHHHHh-------cC
Confidence 3344556778888878999999999999999999999999999999999988744 444444444433221 11
Q ss_pred CccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 014600 119 TSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFS 188 (422)
Q Consensus 119 ~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~ 188 (422)
+.+ . ..+...+.+.+....+....++.+|..+ +++|++..++.+....+|..+++.+.+.+.+
T Consensus 307 --~~~-~---~~~~~~~~g~~~~~~~~~~~~~~~~~~p-~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~ 369 (406)
T PRK11551 307 --SFA-G---MLLAGFAAGLFVVGGQSVLYALAPLFYP-TQVRGTGVGAAVAVGRLGSMAGPLLAGQLLA 369 (406)
T ss_pred --cHH-H---HHHHHHHHHHHHHhHHHHHHHHHHHHcc-hhhhhhhhhHHHHhhhHHHHHHhhhHhhhhc
Confidence 111 1 1112234555555566677788888876 6789999999988888888888777666554
No 116
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.90 E-value=1.1e-08 Score=85.19 Aligned_cols=135 Identities=15% Similarity=0.028 Sum_probs=91.6
Q ss_pred HHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhh
Q 014600 67 SGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVA 146 (422)
Q Consensus 67 i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p 146 (422)
...+...+..|+.|++.||+||||.++ .+.....++...+.. .+ +.+ ...+...+.+++.+.....
T Consensus 6 ~~~~~~~~~~~~~g~~~d~~g~~~~~~-~~~~~~~~~~~~~~~-------~~--~~~----~~~~~~~~~g~~~~~~~~~ 71 (141)
T TIGR00880 6 GYALGQLIYSPLSGLLTDRFGRKPVLL-VGLFIFVLSTAMFAL-------SS--NIT----VLIIARFLQGFGAAFALVA 71 (141)
T ss_pred eehhHHHHHHhhHHHHHhhcchhHHHH-HHHHHHHHHHHHHHH-------hc--cHH----HHHHHHHHHHHHHHHHHHh
Confidence 344566678899999999999999854 555555555544331 11 111 1122234677777777788
Q ss_pred hhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchHHHHHHHHHHHHHHHHHHHhhhhccccC
Q 014600 147 HMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEE 226 (422)
Q Consensus 147 ~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~~~~~~~~~~~~i~~~i~~i~~~i~~~~~~E 226 (422)
..++..|..+ +++|++..+..+....+|..+++.+.+.+.+ ..+|++.+.+.+.+.++..+..++..||
T Consensus 72 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 72 GAALIADIYP-PEERGVALGLMSAGIALGPLLGPPLGGVLAQ----------FLGWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred HHHHHHHHCC-hhhhhHHHHHHHHhHHHHHHHhHHhHHHHhc----------ccchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 8889999876 5789999999988888888887766654432 2367777777766666666666665555
No 117
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=98.89 E-value=2.6e-08 Score=97.55 Aligned_cols=156 Identities=16% Similarity=0.099 Sum_probs=105.8
Q ss_pred HHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCcccc
Q 014600 38 ITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRIL 117 (422)
Q Consensus 38 ~~~~~~~~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~ 117 (422)
........+.+.|.++.|.+..+.+.+..+..+...+..++.|+++||+||||. +..+.+..+++..++.. .+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~-~~~~~~~~~~~~~~~~~--~~---- 291 (377)
T TIGR00890 219 VSGLLLIGLYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKT-MSIVFGISAVGMAAMLF--IP---- 291 (377)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh-hhHHHHHHHHHHHHHHH--cc----
Confidence 333334455666666669999999999999999999999999999999999877 44566666666554432 11
Q ss_pred CCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCc
Q 014600 118 STSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHAD 197 (422)
Q Consensus 118 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~~ 197 (422)
..... .+.....+.+.+++.......++..|..+ +++|++..+..+....+|..+++.+.+.+.+
T Consensus 292 -~~~~~----~~~~~~~~~g~~~g~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~--------- 356 (377)
T TIGR00890 292 -MLNDV----LFLATVALVFFTWGGTISLFPSLVSDIFG-PANSAANYGFLYTAKAVAGIFGGLIASHALT--------- 356 (377)
T ss_pred -cchhH----HHHHHHHHHHHHhccchhccHHHHHHHhh-hhhhhhHhHHHHHHHHHHHHHHHHHHHHHHh---------
Confidence 11111 11111234555666555666778888876 6789999999888888888888776655543
Q ss_pred hHHHHHHHHHHHHHHHHHH
Q 014600 198 LENQYRWIAYSSIFIGCCF 216 (422)
Q Consensus 198 ~~~~~~~~~~i~~~i~~i~ 216 (422)
..+|++.+.+.+++.+++
T Consensus 357 -~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 357 -EIGFEYTFIVTGAFALTS 374 (377)
T ss_pred -hhchhhHHHHHHHHHHHh
Confidence 236777777666555544
No 118
>PRK10504 putative transporter; Provisional
Probab=98.89 E-value=1e-07 Score=97.38 Aligned_cols=144 Identities=11% Similarity=-0.035 Sum_probs=100.5
Q ss_pred hHHHHHHHHHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccC
Q 014600 35 LNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMP 113 (422)
Q Consensus 35 ~~~~~~~~~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p 113 (422)
...........+.++|++.. |.++...|+++....+...+..++.|+++||+||||.+ ..+....++...++.. .+
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~-~~~~~~~~~~~~~~~~--~~ 348 (471)
T PRK10504 272 AGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVL-VATTLGLALVSLLFML--VA 348 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHH-HHHHHHHHHHHHHHHh--cc
Confidence 33344444445677788876 99999999999888888888889999999999998884 4566656655444332 11
Q ss_pred ccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 014600 114 CRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVS 190 (422)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~ 190 (422)
..+..+. ..+...+.+++.+....+.+++..+..+ +++|+...+..+....+|..+++.+.+.+++..
T Consensus 349 -----~~~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~~ 416 (471)
T PRK10504 349 -----LLGWYYL---LPFVLFLQGMVNSTRFSSMNTLTLKDLP-DNLASSGNSLLSMIMQLSMSIGVTIAGLLLGLF 416 (471)
T ss_pred -----ccccHHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCC-HHhccchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1111111 1111234567777777788888888776 578999999988888888888888877777654
No 119
>PRK09528 lacY galactoside permease; Reviewed
Probab=98.88 E-value=5.2e-08 Score=98.04 Aligned_cols=177 Identities=8% Similarity=-0.083 Sum_probs=110.7
Q ss_pred eeeeccchhHHHHHHHHHHHHHHHHHHh----CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHH
Q 014600 27 LYYGSGHMLNDITAACWFTYLLLFLTDI----GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAV 102 (422)
Q Consensus 27 ~~y~~g~~~~~~~~~~~~~~l~~f~t~~----gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i 102 (422)
+......++....+......++.|+.+. +.+..+.|.+.++..+..++..++.|+++||+||||. +..+..+.++
T Consensus 226 ~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~-~~~~~~l~~~ 304 (420)
T PRK09528 226 WFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNA-LLLAGTIMAV 304 (420)
T ss_pred EeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchh-hHHHHHHHHH
Confidence 3333433344444444445567776653 5677889999999999999999999999999999987 4455666666
Q ss_pred HHHHhhcCccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHH-HHHHHHHHHHHHHH
Q 014600 103 SFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSC-RNAFTMVANLSLYA 181 (422)
Q Consensus 103 ~~~~lf~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~-~~~~~~ig~~l~~~ 181 (422)
...++.. .+ +.++. .....+.+.+++..........++..+ ++.|+...+. .+....+|..+++.
T Consensus 305 ~~~l~~~-------~~--~~~~~----~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~a~~~~~~~~~~~~lg~~ig~~ 370 (420)
T PRK09528 305 RIIGSGF-------AT--GPLEV----SILKLLHAFEVPFLLVGVFKYITLNFD-VRLSATIYLVGFQFAKQLGAVFLST 370 (420)
T ss_pred HHHHHHh-------cc--cHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHcC-ccceeeeeeehHHHHHHHHHHHHHH
Confidence 5544331 11 12211 112235566666665566677777765 4566665443 34456677777666
Q ss_pred HHHHHHhhccCCCCCchHHHHHHHHHHHHHHHHHHHhhhhccccCcc
Q 014600 182 IAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPR 228 (422)
Q Consensus 182 ~~~~l~~~~~~~g~~~~~~~~~~~~~i~~~i~~i~~~i~~~~~~E~~ 228 (422)
+.+.+.+. .||+..+.+.+++.++..++.++..|+++
T Consensus 371 ~~G~l~~~----------~G~~~~f~~~~~~~~i~~~~~~~~~~~~~ 407 (420)
T PRK09528 371 LAGNLYDS----------IGFQGTYLILGGIVLLFTLISVFTLSGDR 407 (420)
T ss_pred HHHHHHHh----------hCchHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 65555442 36777777777776666666666666644
No 120
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=98.88 E-value=6.5e-08 Score=96.85 Aligned_cols=165 Identities=12% Similarity=0.086 Sum_probs=103.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccC
Q 014600 34 MLNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMP 113 (422)
Q Consensus 34 ~~~~~~~~~~~~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p 113 (422)
+...........|+|.|+++.|.++.+.+.+..+..+...+..++.|+++||+||||+....+.+..+++...+.. .|
T Consensus 232 ~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~--~~ 309 (402)
T TIGR00897 232 IINTIGLFGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYY--IP 309 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHH--HH
Confidence 3344444555678888876669999999999999999999999999999999999887543333333333222211 11
Q ss_pred ccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Q 014600 114 CRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAK 193 (422)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~ 193 (422)
.. ..+..+. ..+...+++.+.... .|..+...+.. +++|++..++.+....+|+.+++.+.+.+++.
T Consensus 310 ~~---~~~~~~~---~~~~~~~~G~~~~~~-~~~~~~~~~~~--~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~---- 376 (402)
T TIGR00897 310 QH---FGHSFAV---ALIIAIALGIFLAGY-VPLAAVFPTLA--PKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGF---- 376 (402)
T ss_pred Hc---cCCcHHH---HHHHHHHHHHHHHHH-HHHHHHHHhhC--cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhh----
Confidence 00 0111111 112223455555543 45556666653 46899999999999999988888777766653
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHhh
Q 014600 194 THADLENQYRWIAYSSIFIGCCFVGI 219 (422)
Q Consensus 194 g~~~~~~~~~~~~~i~~~i~~i~~~i 219 (422)
.|+...+.+.+++.++...+
T Consensus 377 ------~g~~~~~~~~a~~~~i~~~~ 396 (402)
T TIGR00897 377 ------FGAIGVVWIFAALYVVSAFL 396 (402)
T ss_pred ------cchHHHHHHHHHHHHHHHHH
Confidence 24555555555554444333
No 121
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.87 E-value=6.1e-06 Score=79.19 Aligned_cols=210 Identities=17% Similarity=0.092 Sum_probs=141.1
Q ss_pred HHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCccchhh
Q 014600 46 YLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVE 125 (422)
Q Consensus 46 ~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~~~~ 125 (422)
.+...-.|.|+|.+.+|++.++.-+.-++..|+..++..|+|-+|. +..+.++.+++..+=- ..+..
T Consensus 34 LL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~-l~~~Llli~~G~~iR~----------~~~~~-- 100 (395)
T COG2807 34 LLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERS-LFLALLLIAAGILIRS----------LGGLP-- 100 (395)
T ss_pred hHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHH-HHHHHHHHHHHHHHHh----------cccHH--
Confidence 3444444459999999999999999999999999999999999888 4456666666643210 01111
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchHHHHHHH
Q 014600 126 TISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWI 205 (422)
Q Consensus 126 ~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~~~~~~~~~~ 205 (422)
.. +.-..+.+.+-+..|+-..+++-+.+ +++-+.+++......++|+.+++.+..|+.+.. .+|+..
T Consensus 101 -~L-~~gt~l~G~gIav~nVLLPslIK~~F--pk~~~~mtglYs~sl~~~aaLaa~lavpla~~~---------~gW~~a 167 (395)
T COG2807 101 -LL-FLGTLLAGAGIAVINVLLPSLIKRDF--PKRVGLMTGLYSTSLGAGAALAAALAVPLAQHS---------GGWRGA 167 (395)
T ss_pred -HH-HHHHHHHHhhHHHHHHhhhHHHHhhc--ccchhhHHhHHHHHHHHHHHHHhhhhhHHHHhh---------ccHHHH
Confidence 11 11223566666777776677776654 456678888888888888989988888886531 368877
Q ss_pred HHHHHHHHHHHHhhhhcc-ccCcccccccCCCcchhhhHHHHHHhHHHHHHHHHHHHHHHHHHhhhHHHHHHhhhccCcc
Q 014600 206 AYSSIFIGCCFVGIFLSR-TEEPRLKMGLRGNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMG 284 (422)
Q Consensus 206 ~~i~~~i~~i~~~i~~~~-~~E~~~~~~~~~~~~~~~~~~~~~~n~~f~~~~~~~~~~~~~~~~~~~y~~~y~~~~~~l~ 284 (422)
...-+.++++..++.+.- .||+ .+.+++ + ...-..++|||.-|.+.+.+-+++...+....++|.++.|. |++
T Consensus 168 L~~WAl~allAl~~WlPq~~r~~--~~~~~~--~-~~~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~~-G~s 241 (395)
T COG2807 168 LGFWALLALLALLIWLPQALREQ--AASIAT--K-LVSVRKVWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILIDR-GLS 241 (395)
T ss_pred HHHHHHHHHHHHHHHhhhccccc--cccccc--c-cccccccccCchhHHHHHHHHhhHHHHHHHHHHHHHHHHHc-CCC
Confidence 666666666665444333 2221 111111 1 11224578999877777766677788889999999999887 665
Q ss_pred chh
Q 014600 285 QSA 287 (422)
Q Consensus 285 ~~~ 287 (422)
+..
T Consensus 242 a~~ 244 (395)
T COG2807 242 AAE 244 (395)
T ss_pred HHH
Confidence 543
No 122
>PRK15011 sugar efflux transporter B; Provisional
Probab=98.87 E-value=1.3e-07 Score=94.48 Aligned_cols=160 Identities=11% Similarity=0.049 Sum_probs=100.7
Q ss_pred HHHHHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccC
Q 014600 40 AACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILS 118 (422)
Q Consensus 40 ~~~~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~ 118 (422)
+.....+++.|+++. |+++.+.|.+..+..+...+..++.|+++||+||||.. ..+.+...+.+..+.. .+
T Consensus 232 ~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~-~~~~~~~~~~~~~~~~-------~~ 303 (393)
T PRK15011 232 NSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLM-RVAAVAGVCFYAGMLM-------AH 303 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHH-HHHHHHHHHHHHHHHH-------Hh
Confidence 333446788888887 99999999998888888888899999999999999864 4454444443322221 11
Q ss_pred CccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCch
Q 014600 119 TSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADL 198 (422)
Q Consensus 119 ~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~~~ 198 (422)
+.+.. . +...+..++++.......+...|..+ ++|++..+..+....+|..+++.+.+.+.+.
T Consensus 304 --~~~~~-l---~~~~l~~~~~g~~~~~~~~~~~~~~p--~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~--------- 366 (393)
T PRK15011 304 --SPAIL-L---GLQLLNAIYIGILGGIGMLYFQDLMP--GQAGSATTLYTNTSRVGWIIAGSLAGIVAEI--------- 366 (393)
T ss_pred --hHHHH-H---HHHHHHHHHHHHHHHHHHHHHHHhCC--CCcchHHHHHHHHHHHHHHHHHHHHHHHHHH---------
Confidence 11111 1 11122333344333344455667664 5688888887777888888888777665542
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhccccC
Q 014600 199 ENQYRWIAYSSIFIGCCFVGIFLSRTEE 226 (422)
Q Consensus 199 ~~~~~~~~~i~~~i~~i~~~i~~~~~~E 226 (422)
.+|+..+.+.+++.++..+.. +..||
T Consensus 367 -~g~~~~~~~~~~~~~~~~~~~-~~~~~ 392 (393)
T PRK15011 367 -WNYHAVFWFALVMIIATLFCL-LRIKD 392 (393)
T ss_pred -hhhHHHHHHHHHHHHHHHHHH-HhhcC
Confidence 367777766655555544443 34454
No 123
>PRK03545 putative arabinose transporter; Provisional
Probab=98.86 E-value=6.2e-08 Score=96.49 Aligned_cols=161 Identities=12% Similarity=0.015 Sum_probs=106.6
Q ss_pred HHHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCc
Q 014600 42 CWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTS 120 (422)
Q Consensus 42 ~~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~ 120 (422)
...++++.|+.+. |.++.++|.+..+..+...+..++.|+++||+|||+. ..+.....++..++.. .. .
T Consensus 223 ~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~--~~~~~~~~~~~~~l~~------~~--~ 292 (390)
T PRK03545 223 TAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFL--LIAIALLLVCLLLLLP------AA--N 292 (390)
T ss_pred HHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHH--HHHHHHHHHHHHHHHH------Hh--c
Confidence 3456788888887 9999999999999999999999999999999998754 3344444444332221 01 1
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchHH
Q 014600 121 TLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLEN 200 (422)
Q Consensus 121 ~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~~~~~ 200 (422)
+.. . ..+..++++++.........+...+.. +++|++..+..+....+|..+++.+.+.+.+. .
T Consensus 293 ~~~-~---~~~~~~l~g~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~----------~ 356 (390)
T PRK03545 293 SEW-H---LSVLSIFWGIAIMCIGLAMQVKVLKLA--PDATDVAMALFSGIFNIGIGAGALLGNQVSLH----------L 356 (390)
T ss_pred hHH-H---HHHHHHHHHHHHhcchHHHHHHHHHhC--CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------c
Confidence 111 1 111223566666555555666666664 45788888887777788888877776665543 3
Q ss_pred HHHHHHHHHHHHHHHHHhhhhccccCcc
Q 014600 201 QYRWIAYSSIFIGCCFVGIFLSRTEEPR 228 (422)
Q Consensus 201 ~~~~~~~i~~~i~~i~~~i~~~~~~E~~ 228 (422)
+++..+.+.+.+.++..+++++..|.++
T Consensus 357 g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (390)
T PRK03545 357 GLSSIGYVGAALALAALVWSILIFRRFP 384 (390)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHccccc
Confidence 5666677666677776666666666543
No 124
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=98.85 E-value=1.7e-07 Score=92.27 Aligned_cols=159 Identities=11% Similarity=0.034 Sum_probs=101.5
Q ss_pred HHHHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCC
Q 014600 41 ACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILST 119 (422)
Q Consensus 41 ~~~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~ 119 (422)
.....+++.|+++. |.++.+.|.+............++.|+++||+||||.. ..+.+...+....+.. .
T Consensus 216 ~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~-~~~~~~~~~~~~~~~~-------~-- 285 (375)
T TIGR00899 216 ILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLM-LLAALAGVAFYTGLAA-------D-- 285 (375)
T ss_pred HHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHH-HHHHHHHHHHHHHHHH-------H--
Confidence 34445678888887 99999999998888888888889999999999999874 4444443333322211 1
Q ss_pred ccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchH
Q 014600 120 STLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLE 199 (422)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~~~~ 199 (422)
.+.+ . ......+.+.+.+.......++..|..+ ++|++..+..+....+|..+++.+.+.+.+.
T Consensus 286 ~~~~-~---~~~~~~~~g~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~---------- 349 (375)
T TIGR00899 286 NSLW-A---LLMLQLLNAIFIGILAGIGMLYFQDLMP--GRAGAATTLYTNTGRVGWIIAGSVGGILAER---------- 349 (375)
T ss_pred HHHH-H---HHHHHHHHHHHHHHHHHHHHHHHHHhCc--chhhHHHHHHHHHHHHHHHHHHHHHHHHHHh----------
Confidence 1111 1 1112234566666655566677778764 4566888888777888888887776655542
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhccccC
Q 014600 200 NQYRWIAYSSIFIGCCFVGIFLSRTEE 226 (422)
Q Consensus 200 ~~~~~~~~i~~~i~~i~~~i~~~~~~E 226 (422)
.+|+..+.+.++..++..++. ..+||
T Consensus 350 ~g~~~~~~~~~~~~~~~~~~~-~~~~~ 375 (375)
T TIGR00899 350 WSYHAVYWFAIVMLIVALFCL-LLIKD 375 (375)
T ss_pred ccchhHHHHHHHHHHHHHHHH-heecC
Confidence 256666666655555544433 44454
No 125
>TIGR00893 2A0114 d-galactonate transporter.
Probab=98.83 E-value=3.4e-08 Score=97.09 Aligned_cols=172 Identities=9% Similarity=-0.039 Sum_probs=106.8
Q ss_pred eeeeccchhHHHHHHHHHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHH--
Q 014600 27 LYYGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVS-- 103 (422)
Q Consensus 27 ~~y~~g~~~~~~~~~~~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~-- 103 (422)
+.+....+...........+++.|+.+. |.++.+.+.+..+..+...+..++.|+++||+|||+..+........++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (399)
T TIGR00893 218 WGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGL 297 (399)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHH
Confidence 3344445555666666778899999887 9999999999999999999999999999999999873222221111111
Q ss_pred --HHHhhcCccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHH
Q 014600 104 --FSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYA 181 (422)
Q Consensus 104 --~~~lf~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~ 181 (422)
....+. . ...+..+. .. .....+........+..++..|..+ +++|++..++.+....+|+.+++.
T Consensus 298 ~~~~~~~~---~----~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~g~~~~~~ 365 (399)
T TIGR00893 298 VLSLLMFA---T----NYVNIPYA---AL-ALVALGFFGLGAGAIGWALISDNAP-GNIAGLTGGLINSLGNLGGIVGPI 365 (399)
T ss_pred HHHHHHHH---h----ccchhHHH---HH-HHHHHHHhchhhhhHHHHHHHhhcC-hhHHHHHHHHHHHHHHHhhhhhhH
Confidence 111111 0 00111111 11 1112222222256677888889876 678999999999988888888776
Q ss_pred HHHHHHhhccCCCCCchHHHHHHHHHHHHHHHHHHHhh
Q 014600 182 IAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGI 219 (422)
Q Consensus 182 ~~~~l~~~~~~~g~~~~~~~~~~~~~i~~~i~~i~~~i 219 (422)
+.+.+.+..+ +|++.+.+.+++.++..+.
T Consensus 366 i~g~l~~~~g---------~~~~~~~~~~~~~~~~~~~ 394 (399)
T TIGR00893 366 VIGAIAATTG---------SFAGALMVVAALALIGALS 394 (399)
T ss_pred HhhhhccCCC---------chhHHHHHHHHHHHHHHHH
Confidence 6655543211 2566665555555544433
No 126
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=98.83 E-value=7.9e-08 Score=94.75 Aligned_cols=145 Identities=17% Similarity=0.085 Sum_probs=96.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCcc
Q 014600 34 MLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCM 112 (422)
Q Consensus 34 ~~~~~~~~~~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~ 112 (422)
+..........++++.|+++. |.+..+.+.+..+..+...+..|+.|+++||+||||..+..+......+..++.. .
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~--~ 306 (394)
T TIGR00883 229 IATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMA--L 306 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHH--H
Confidence 344455555667899999877 9999999999999999999999999999999999988654443333323221110 0
Q ss_pred CccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHH-HHHHHHHHHHHHHHHHHHHhh
Q 014600 113 PCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCR-NAFTMVANLSLYAIAFIVFSV 189 (422)
Q Consensus 113 p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~-~~~~~ig~~l~~~~~~~l~~~ 189 (422)
....+.+ . ......+.+.+++....+..++.+|.++ +++|++..+.. +....+|..+++.+.+.+.+.
T Consensus 307 ----~~~~~~~-~---~~~~~~~~g~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~ 375 (394)
T TIGR00883 307 ----LDSGSFT-L---FFFLVLGLALIGGMYTGPMGSFLPELFP-TEVRYTGASLAYNLAGAIFGGFAPYIAAALVAM 375 (394)
T ss_pred ----hcCCchH-H---HHHHHHHHHHHHHHHhhhHHHHHHHhCC-ccceeeEeeehhHhHHHHHhhHHHHHHHHHHHH
Confidence 0011111 1 1112235667777778888999999987 56788877763 344456666766666666543
No 127
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=98.81 E-value=6.8e-08 Score=93.44 Aligned_cols=165 Identities=16% Similarity=0.159 Sum_probs=120.7
Q ss_pred cchhHHHHHHHHHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcC
Q 014600 32 GHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGG 110 (422)
Q Consensus 32 g~~~~~~~~~~~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~ 110 (422)
..+...........+.+.+..+. |.+..+.+.+..+..+...+..++.|+++||+|||+..+..+.....++...+..
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~- 261 (352)
T cd06174 183 AFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLAL- 261 (352)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH-
Confidence 34445555566677889999988 9999999999999999999999999999999999882355666776666554331
Q ss_pred ccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 014600 111 CMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVS 190 (422)
Q Consensus 111 ~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~ 190 (422)
.+ +.+ ...+...+.+.+.+.......++..|..+ +++|++..+..+....+|..+++.+.+.+.+.
T Consensus 262 ------~~--~~~----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~- 327 (352)
T cd06174 262 ------AP--SLA----LLLVALLLLGFGLGFAFPALLTLASELAP-PEARGTASGLFNTFGSLGGALGPLLAGLLLDT- 327 (352)
T ss_pred ------hc--cHH----HHHHHHHHHHHHHhccchhHHHHHHhhcC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-
Confidence 11 111 11222346778888888888999999876 58999999999999999998888776665432
Q ss_pred cCCCCCchHHHHHHHHHHHHHHHHHHHhhh
Q 014600 191 TAKTHADLENQYRWIAYSSIFIGCCFVGIF 220 (422)
Q Consensus 191 ~~~g~~~~~~~~~~~~~i~~~i~~i~~~i~ 220 (422)
.+|++.+.+.+++.++..++.
T Consensus 328 ---------~~~~~~~~~~~~~~~i~~i~~ 348 (352)
T cd06174 328 ---------GGYGGVFLILAALALLAALLL 348 (352)
T ss_pred ---------cCcchHHHHHHHHHHHHHHHh
Confidence 356666666666666655443
No 128
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=98.81 E-value=8.9e-08 Score=97.44 Aligned_cols=170 Identities=8% Similarity=-0.096 Sum_probs=96.4
Q ss_pred eccchhHHHHHHHHHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccC--CchhHHHHHHHHHHHHHHH
Q 014600 30 GSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFG--HFKIWHGAGSVLVAVSFSS 106 (422)
Q Consensus 30 ~~g~~~~~~~~~~~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~G--rrrp~ll~g~i~~~i~~~~ 106 (422)
.+..+...........|+|.|+++. |++..+++.+..+..+...+..++.|+++||++ ||++.......+..++..+
T Consensus 259 ~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~ 338 (452)
T PRK11273 259 AIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIV 338 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHH
Confidence 3333334444455667999999997 999999999998888888899999999999984 4443222222333333322
Q ss_pred hhcCccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHH-HHHHHHH
Q 014600 107 VFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLS-LYAIAFI 185 (422)
Q Consensus 107 lf~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l-~~~~~~~ 185 (422)
++. .+ ..+.. . . .. ...+.+...........++..|..+ +++|++..++.+...++|+.+ ++.+.+.
T Consensus 339 ~~~--~~-----~~~~~-~-~-~~-~~~~~g~~~~~~~~~~~~~~~~~~p-~~~~g~~~g~~~~~~~~g~~~~g~~v~g~ 406 (452)
T PRK11273 339 YWL--NP-----AGNPT-V-D-MA-CMIVIGFLIYGPVMLIGLHALELAP-KKAAGTAAGFTGLFGYLGGSVAASAIVGY 406 (452)
T ss_pred HHH--hc-----ccChH-H-H-HH-HHHHHHHHHHhHHHHHHHHHHHHcC-hhhhhhHHHHHHHHHHHHHHHhhhhhHHH
Confidence 221 11 11111 1 1 11 1112222221111222344556664 578999999988777776544 4555544
Q ss_pred HHhhccCCCCCchHHHHHHHHHHHHHHHHHHHhhhh
Q 014600 186 VFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFL 221 (422)
Q Consensus 186 l~~~~~~~g~~~~~~~~~~~~~i~~~i~~i~~~i~~ 221 (422)
+.+ ..+|+..+.+.+..++++.+...
T Consensus 407 l~~----------~~g~~~~f~~~~~~~~~~~~~~~ 432 (452)
T PRK11273 407 TVD----------FFGWDGGFMVMIGGSILAVILLI 432 (452)
T ss_pred HHH----------HhcchHHHHHHHHHHHHHHHHHH
Confidence 443 23566666666555555444333
No 129
>PRK11663 regulatory protein UhpC; Provisional
Probab=98.81 E-value=9.6e-08 Score=96.68 Aligned_cols=171 Identities=9% Similarity=-0.036 Sum_probs=102.9
Q ss_pred HHHHHHHHHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccC--CchhHHHHHHHHHHHHHHHhhcCcc
Q 014600 36 NDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFG--HFKIWHGAGSVLVAVSFSSVFGGCM 112 (422)
Q Consensus 36 ~~~~~~~~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~G--rrrp~ll~g~i~~~i~~~~lf~~~~ 112 (422)
....+....+++|.|+++. |+++.+++...++..+...+..++.|+++||++ ||++......+...+....++. .
T Consensus 255 ~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~--~ 332 (434)
T PRK11663 255 VYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWL--M 332 (434)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHH--c
Confidence 3344445567889999887 999999999999999999999999999999983 3444222222222222222221 1
Q ss_pred CccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 014600 113 PCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTA 192 (422)
Q Consensus 113 p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~ 192 (422)
| ..+..+....+ ...+.+.............|..+ +++|++..++.+....+|+.+++.+.+.+.+.
T Consensus 333 ~-----~~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~--- 399 (434)
T PRK11663 333 P-----FASYVMQAACF----FTIGFFVFGPQMLIGMAAAECSH-KEAAGAATGFVGLFAYLGAALSGYPLAKVLEI--- 399 (434)
T ss_pred c-----cccHHHHHHHH----HHHHHHHhhHHHHHHHHHHhccc-HhhHHhHHHHHHHHHHHHHHHhcccHHHHHHh---
Confidence 2 11111111111 11221111111122334566654 67899999999999999998887666655532
Q ss_pred CCCCchHHHHHHHHHHHHHHHHHHHhhhhccccCcc
Q 014600 193 KTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPR 228 (422)
Q Consensus 193 ~g~~~~~~~~~~~~~i~~~i~~i~~~i~~~~~~E~~ 228 (422)
.+|...+++.++++++..+.+.+..|++.
T Consensus 400 -------~g~~~~f~~~~~~~~~~~~~~~~~~~~~~ 428 (434)
T PRK11663 400 -------WHWTGFFVVISIAAGISALLLLPFLNAQA 428 (434)
T ss_pred -------cccHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 35777777777777666666666666654
No 130
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=98.81 E-value=2.5e-07 Score=92.31 Aligned_cols=160 Identities=16% Similarity=0.058 Sum_probs=101.1
Q ss_pred HHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccc
Q 014600 37 DITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRI 116 (422)
Q Consensus 37 ~~~~~~~~~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~ 116 (422)
...+.....+++.|+.+.|.+ ..+.......+...+..++.|++.||+||||. +..+....+++..++..
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~-~~~~~~~~~~~~~~~~~------- 298 (399)
T PRK05122 229 SIGFGTIATFITLYYAARGWD--GAALALTLFGVAFVGARLLFGNLINRLGGLRV-AIVSLLVEILGLLLLWL------- 298 (399)
T ss_pred HHHHHHHHHHHHHHHHHcccc--cchHHHHHHHHHHHHHHHHHHHHHHHhccHHH-HHHHHHHHHHHHHHHHH-------
Confidence 334445567788888776663 34555666667777888999999999999876 44565666665544331
Q ss_pred cCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCC
Q 014600 117 LSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHA 196 (422)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~ 196 (422)
.+ +.+ . ..+..++.+++++.......+...+..+ +++|++..++.+....+|..+++.+.+.+.+
T Consensus 299 ~~--~~~-~---~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~-------- 363 (399)
T PRK05122 299 AP--SPW-M---ALIGAALTGFGFSLVFPALGVEAVKRVP-PQNRGAALGAYSVFLDLSLGITGPLAGLVAS-------- 363 (399)
T ss_pred hc--cHH-H---HHHHHHHHHHhHHHHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------
Confidence 11 111 1 1222345666666655555566667654 6789999999888888887776655554443
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhhhcc
Q 014600 197 DLENQYRWIAYSSIFIGCCFVGIFLSR 223 (422)
Q Consensus 197 ~~~~~~~~~~~i~~~i~~i~~~i~~~~ 223 (422)
..+|++.+.+.+.+.+++.++..+.
T Consensus 364 --~~g~~~~~~~~~~~~~~~~~~~~~~ 388 (399)
T PRK05122 364 --WFGYPSIFLAAALAALLGLALTWLL 388 (399)
T ss_pred --HcCHHHHHHHHHHHHHHHHHHHHHh
Confidence 2367777776666666655544443
No 131
>PRK10489 enterobactin exporter EntS; Provisional
Probab=98.80 E-value=2.8e-07 Score=92.66 Aligned_cols=161 Identities=8% Similarity=-0.092 Sum_probs=106.9
Q ss_pred HHHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCc
Q 014600 42 CWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTS 120 (422)
Q Consensus 42 ~~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~ 120 (422)
....+++.|.++. |.++...|.+..+..+...+..++.|++.||.+++|. +..+.+..++++.++.. .+
T Consensus 241 ~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~-l~~~~~~~~~~~~~~~~-------~~-- 310 (417)
T PRK10489 241 AVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLL-MLLSTLGSFLAVGLFGL-------MP-- 310 (417)
T ss_pred hHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchH-HHHHHHHHHHHHHHHHc-------cc--
Confidence 3456788899996 9999999999999999999999999999999766655 55566666665544321 11
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchHH
Q 014600 121 TLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLEN 200 (422)
Q Consensus 121 ~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~~~~~ 200 (422)
..+. ..+...+++++.+.......++..+..+ ++.|++..++.+....+|..+++.+.+.+.+..
T Consensus 311 -~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~p-~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~---------- 375 (417)
T PRK10489 311 -MWIL---AVLCLALFGYLSAISSLLQYTLLQTQTP-DEMLGRINGLWTAQNVTGDAIGAALLGGLGAMM---------- 375 (417)
T ss_pred -hHHH---HHHHHHHHHHHHHHHHHHHHHHHHhhCC-HHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHh----------
Confidence 1111 1111234666666666666777778775 578999999998888888888888877666532
Q ss_pred HHHHHHHHHHHHHHHHHhhhhccccCc
Q 014600 201 QYRWIAYSSIFIGCCFVGIFLSRTEEP 227 (422)
Q Consensus 201 ~~~~~~~i~~~i~~i~~~i~~~~~~E~ 227 (422)
++...+.+.+.+.++...+....++|.
T Consensus 376 g~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (417)
T PRK10489 376 TPVASASASGFGLLIIGVLLLLVLGEL 402 (417)
T ss_pred chhhHHHHHHHHHHHHHHHHHHhcccc
Confidence 333344444444444444444455553
No 132
>PRK09952 shikimate transporter; Provisional
Probab=98.77 E-value=4.7e-07 Score=91.76 Aligned_cols=171 Identities=12% Similarity=0.005 Sum_probs=102.0
Q ss_pred HHHHHHHHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCcc
Q 014600 37 DITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCR 115 (422)
Q Consensus 37 ~~~~~~~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~ 115 (422)
........++++.|.++. |++......+..+..+...+..|+.|+++||+||||.. +.+.+..+++...++. .
T Consensus 263 ~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~-~~~~~~~~~~~~~~~~---~-- 336 (438)
T PRK09952 263 LLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVY-ITGALIGTLSAFPFFM---A-- 336 (438)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHH-HHHHHHHHHHHHHHHH---H--
Confidence 334445567888888887 99988776666667777888899999999999999874 4555544443322221 0
Q ss_pred ccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHH-HHHHHHHHHHHHHHHHhhccCCC
Q 014600 116 ILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAF-TMVANLSLYAIAFIVFSVSTAKT 194 (422)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~-~~ig~~l~~~~~~~l~~~~~~~g 194 (422)
.. ..+..+. .++...+.+++.+....+..++.+|..+ .+.|....++.+.. ..+|+.+++.+.+.+++..+
T Consensus 337 ~~-~~~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~e~~p-~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~--- 408 (438)
T PRK09952 337 LE-AQSIFWI---VFFSIMLANIAHDMVVCVQQPMFTEMFG-ASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFG--- 408 (438)
T ss_pred HH-cCChHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHCC-cchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcC---
Confidence 00 1111111 1111234556666667778899999886 47788777775433 33666666666655554321
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHhhhhccccCc
Q 014600 195 HADLENQYRWIAYSSIFIGCCFVGIFLSRTEEP 227 (422)
Q Consensus 195 ~~~~~~~~~~~~~i~~~i~~i~~~i~~~~~~E~ 227 (422)
.+|...+...++.+++..+.. +..||+
T Consensus 409 -----~~~~~~~~~~~~~~~i~~v~~-~~~~~~ 435 (438)
T PRK09952 409 -----GSWHSVAIYLLAGCLISAMTA-LLMKDN 435 (438)
T ss_pred -----CCchHHHHHHHHHHHHHHHHH-HHcccc
Confidence 135555554544454443333 345663
No 133
>PRK03633 putative MFS family transporter protein; Provisional
Probab=98.74 E-value=8.6e-07 Score=88.01 Aligned_cols=151 Identities=13% Similarity=0.060 Sum_probs=97.6
Q ss_pred HHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccC
Q 014600 39 TAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILS 118 (422)
Q Consensus 39 ~~~~~~~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~ 118 (422)
......+++|.|+++.|.++..+|.+.++..+...+..++.|+++||+|||+. +..+....+++...+. +
T Consensus 215 ~~~~~~~~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~-l~~~~~~~~~~~~~~~----~----- 284 (381)
T PRK03633 215 VLGSLYGLMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLV-LRVQVFVVILGSIAML----S----- 284 (381)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHH-HHHHHHHHHHHHHHHh----h-----
Confidence 33445567888887779999999999999999999999999999999999876 5555555555543322 1
Q ss_pred CccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCch
Q 014600 119 TSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADL 198 (422)
Q Consensus 119 ~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~~~ 198 (422)
. .. . .....+++.+.........++..|..+ ++++....+......++|..+++.+.+.+.+.
T Consensus 285 ~--~~-~----~~~~~l~g~~~~~~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~--------- 347 (381)
T PRK03633 285 Q--AA-M----APALFILGAAGFTLYPVAMAWACEKVE-HHELVAMNQALLLSYTVGSLLGPSFTAMLMQN--------- 347 (381)
T ss_pred h--HH-H----HHHHHHHHHHHHhHHHHHHHHHHccCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------
Confidence 0 00 0 011123444433444555666677664 45555566665667788888888777766543
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 014600 199 ENQYRWIAYSSIFIGCCFV 217 (422)
Q Consensus 199 ~~~~~~~~~i~~~i~~i~~ 217 (422)
.++.+.+.+.+.+.++..
T Consensus 348 -~g~~~~f~~~~~~~l~~~ 365 (381)
T PRK03633 348 -YSDNLLFIMIASVSFIYL 365 (381)
T ss_pred -hCccHHHHHHHHHHHHHH
Confidence 245666666655555443
No 134
>PRK03699 putative transporter; Provisional
Probab=98.73 E-value=3.4e-07 Score=91.34 Aligned_cols=135 Identities=8% Similarity=0.003 Sum_probs=86.7
Q ss_pred HHHHHHHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccc
Q 014600 38 ITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRI 116 (422)
Q Consensus 38 ~~~~~~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~ 116 (422)
..+.....|+|.|+++. |+++.+.|.+.+...+...+..++.|+++||+||||... .+....++...++..
T Consensus 219 ~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~-~~~~~~~~~~~~~~~------- 290 (394)
T PRK03699 219 LAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILT-VLAGLALVLMYLFVN------- 290 (394)
T ss_pred HHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHH-HHHHHHHHHHHHHHH-------
Confidence 33445567899999887 999999999999999999999999999999999988754 344444433322211
Q ss_pred cCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 014600 117 LSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFS 188 (422)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~ 188 (422)
.+ +..+..+ ..++.+++.+.......+...+..+ +++.+..+.-.....+|..+++.+.+.+.+
T Consensus 291 ~~--~~~~~~~----~~~~~G~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~ 354 (394)
T PRK03699 291 TD--DPSHLLY----AILGLGFFSSAIYTTIITLGSQQTK--VASPKLVNFILTCGTIGTMLTFVVTSPIVA 354 (394)
T ss_pred cC--CchHHHH----HHHHHHHHHHHHHHHHHHHHHHHcc--CCCHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 11 1111111 1224555444444444555666543 345555666666677888887777666654
No 135
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=98.72 E-value=4.1e-07 Score=90.75 Aligned_cols=166 Identities=11% Similarity=0.055 Sum_probs=107.5
Q ss_pred HHHHHHHHHHHHHHHHHh-CCCh---hHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCcc
Q 014600 37 DITAACWFTYLLLFLTDI-GLSP---RGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCM 112 (422)
Q Consensus 37 ~~~~~~~~~~l~~f~t~~-gls~---~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~ 112 (422)
........++++.|..+. +-.. ...|.+..+..+...+..|..|+++||+||||..+ .+.....+....+..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~-~~~~~~~~~~~~~~~--- 307 (408)
T PRK09874 232 QVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILI-TALIFSVLLLIPMSF--- 307 (408)
T ss_pred HHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHH-HHHHHHHHHHHHHHH---
Confidence 334444556777888876 3322 23566677777888889999999999999988744 555555544433221
Q ss_pred CccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 014600 113 PCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTA 192 (422)
Q Consensus 113 p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~ 192 (422)
.+ +.+ . ..+..++.+++.+.......++..+..+ +++|++..+..+....+|..+++.+++.+.+
T Consensus 308 ----~~--~~~-~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~---- 372 (408)
T PRK09874 308 ----VQ--TPL-Q---LGILRFLLGAADGALLPAVQTLLVYNSS-NQIAGRIFSYNQSFRDIGNVTGPLMGAAISA---- 372 (408)
T ss_pred ----hc--cHH-H---HHHHHHHHHhhhHhhHHHHHHHHHHhCC-cccceeeehHHHHHHHHHHHhhHHHHHHHHh----
Confidence 11 111 1 1122235677777777777777777654 5778999888888888888888877666543
Q ss_pred CCCCchHHHHHHHHHHHHHHHHHHHhhhhccccCc
Q 014600 193 KTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEP 227 (422)
Q Consensus 193 ~g~~~~~~~~~~~~~i~~~i~~i~~~i~~~~~~E~ 227 (422)
..+|++.+.+.+++.++..++.++..|++
T Consensus 373 ------~~g~~~~f~~~~~~~l~~~~~~~~~~~~~ 401 (408)
T PRK09874 373 ------NYGFRAVFLVTAGVVLFNAVYSWNSLRRR 401 (408)
T ss_pred ------hcchhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 23678888877777777666665544443
No 136
>PRK12382 putative transporter; Provisional
Probab=98.72 E-value=6e-07 Score=89.36 Aligned_cols=159 Identities=16% Similarity=0.029 Sum_probs=105.3
Q ss_pred HHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCcccc
Q 014600 38 ITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRIL 117 (422)
Q Consensus 38 ~~~~~~~~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~ 117 (422)
........+++.|+++.|.+. .+.......+...+..|+.|+++||+||||. +..+....++++.++.. .
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~-~~~~~~~~~~~~~~~~~-------~ 299 (392)
T PRK12382 230 VGFAVIGTFVSLYFASKGWAM--AGFTLTAFGGAFVLMRVLFGWMPDRFGGVKV-AIVSLLVETVGLLLLWL-------A 299 (392)
T ss_pred HHHhHHHHHHHHHHHhcCCch--hHHHHHHHHHHHHHHHHHHHHHHHhcCCCee-hHHHHHHHHHHHHHHHH-------c
Confidence 334455677788888777654 4555666777778889999999999999877 55666666666554331 1
Q ss_pred CCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCc
Q 014600 118 STSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHAD 197 (422)
Q Consensus 118 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~~ 197 (422)
+ +.+ . ..+...+.+++++....+..+...+..+ +++|++..+..+....+|..+++.+.+.+.+.
T Consensus 300 ~--~~~-~---~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~-------- 364 (392)
T PRK12382 300 P--TAW-V---ALAGAALTGAGCSLIFPALGVEVVKRVP-SQVRGTALGGYAAFQDIAYGVSGPLAGMLATS-------- 364 (392)
T ss_pred c--cHH-H---HHHHHHHHHHHHHhHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------
Confidence 1 111 1 1112235667777666666777777764 68899999999888888888887766655542
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhcc
Q 014600 198 LENQYRWIAYSSIFIGCCFVGIFLSR 223 (422)
Q Consensus 198 ~~~~~~~~~~i~~~i~~i~~~i~~~~ 223 (422)
.+|++.+.+.+.+.++..++..+.
T Consensus 365 --~g~~~~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 365 --FGYPSVFLAGAISAVLGIIVTILS 388 (392)
T ss_pred --hCchHHHHHHHHHHHHHHHHHHhh
Confidence 367777776666666555544433
No 137
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.71 E-value=1.9e-07 Score=91.02 Aligned_cols=181 Identities=13% Similarity=0.012 Sum_probs=111.1
Q ss_pred ceeeeeeeccchhHHHHHHHHHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHH
Q 014600 23 RWSVLYYGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVA 101 (422)
Q Consensus 23 ~~~~~~y~~g~~~~~~~~~~~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~ 101 (422)
.++.+.++.--+..--.+.....+++.|+++. |+++.++|.+.....+..++.-|+.|+++||+|.+|..+. ....++
T Consensus 217 ~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~-~f~~~~ 295 (417)
T COG2223 217 NKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLA-VFVGMA 295 (417)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHH-HHHHHH
Confidence 44555555554544455556778999999998 9999999999999999999999999999999999888554 444444
Q ss_pred HHHHHhhcCccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHH
Q 014600 102 VSFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYA 181 (422)
Q Consensus 102 i~~~~lf~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~ 181 (422)
++...+..+ .+ ......+. +.+....+...++.+.-+-....++|.+.+ +|-+.+.++....+++|+...+.
T Consensus 296 ~~~~~l~~~-~~-~~~~~~~~----~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~--~~~G~v~G~vga~G~lGGf~lp~ 367 (417)
T COG2223 296 LAAALLSLF-LT-GFGHGGSF----VVFVAVFLALFVFAGLGNGSVFKMIPVIFP--KETGAVTGIVGAIGGLGGFFLPL 367 (417)
T ss_pred HHHHHHHcc-cc-ccccCcch----HHHHHHHHHHHHHhccCcchheeechHHHH--hhhhHHHHHHHHhccccccchhH
Confidence 444443321 11 11100111 222222233455555666666778887764 47777888877777777655443
Q ss_pred HHHHHHhhccCCCCCchHHHHHHHHHHHHHHHHHHHhhhh
Q 014600 182 IAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFL 221 (422)
Q Consensus 182 ~~~~l~~~~~~~g~~~~~~~~~~~~~i~~~i~~i~~~i~~ 221 (422)
..+-..+.. + .+...+.++....+++....+
T Consensus 368 ~~g~~~~~t-----g----~~~~~f~~~~~~~~~a~v~~~ 398 (417)
T COG2223 368 AFGVSLDLT-----G----SYTGAFMLLLAFYLVALVLTW 398 (417)
T ss_pred HHHHHHHhc-----c----cHHHHHHHHHHHHHHHHHHHH
Confidence 322222211 1 244445555555555554443
No 138
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=98.71 E-value=1.4e-07 Score=96.32 Aligned_cols=168 Identities=11% Similarity=0.002 Sum_probs=103.6
Q ss_pred HHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCccchhh
Q 014600 46 YLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVE 125 (422)
Q Consensus 46 ~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~~~~ 125 (422)
|.|.++.+.|.+....+.......+...+..++.|+++||+|||+. ++.+.+..+++..++.. .. ..+. ....
T Consensus 293 ~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~-~i~~~~~~~v~~~~l~~--~~---~~~~-~~~~ 365 (479)
T PRK10077 293 YAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPL-QIIGALGMAIGMFSLGT--AF---YTQA-PGIV 365 (479)
T ss_pred HHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHH-HHHhHHHHHHHHHHHHH--HH---hcCc-ccHH
Confidence 3355555558887777777777888888999999999999999877 55677777776554431 01 0011 1111
Q ss_pred hHHHHHHHHHHHHHHHHH-HhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchHHHHHH
Q 014600 126 TISYCVFAAIFNVGWAAT-QVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRW 204 (422)
Q Consensus 126 ~~~~~~~~~l~~~~~~~~-~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~~~~~~~~~ 204 (422)
... ...++..++... .....++.+|..+ +++|++..++......+|.++++.+.+.+... +. -.+..++.+
T Consensus 366 -~~~--~~~~~~~~~~~~~~~~~~~~~~e~~p-~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~-~~---~~~~~~~~~ 437 (479)
T PRK10077 366 -ALL--SMLFYVAAFAMSWGPVCWVLLSEIFP-NAIRGKALAIAVAAQWIANYFVSWTFPMMDKN-SW---LVAHFHNGF 437 (479)
T ss_pred -HHH--HHHHHHHHHhccccchhHHHhHhhCC-hhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhc-cc---hhhhccCcc
Confidence 111 112334444332 2335788888875 67899999999888888888877665333210 00 001234555
Q ss_pred HHHHHHHHHHHHHhhhhccccCcc
Q 014600 205 IAYSSIFIGCCFVGIFLSRTEEPR 228 (422)
Q Consensus 205 ~~~i~~~i~~i~~~i~~~~~~E~~ 228 (422)
.+.+.+++++++.++.++..||++
T Consensus 438 ~~~~~~~~~~~~~~~~~~~~~e~~ 461 (479)
T PRK10077 438 SYWIYGCMGVLAALFMWKFVPETK 461 (479)
T ss_pred HHHHHHHHHHHHHHHHHhccccCC
Confidence 666666666666666666677754
No 139
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=98.70 E-value=2e-07 Score=94.26 Aligned_cols=167 Identities=16% Similarity=-0.024 Sum_probs=104.5
Q ss_pred HHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCc--cc
Q 014600 45 TYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTS--TL 122 (422)
Q Consensus 45 ~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~--~~ 122 (422)
.|.+.+..+.|.+....+....+..+...+..++.|+++||+|||++.. .+.+..++++..+.....+ ..+.. ..
T Consensus 305 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 381 (481)
T TIGR00879 305 YYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLL-IGAAGMAICLFVLGILGAS--FVTGSSKSS 381 (481)
T ss_pred HHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHH-HHHHHHHHHHHHHHHHhhc--ccCCcccch
Confidence 4455555556999988899999999999999999999999999998854 5555555554443210001 01100 00
Q ss_pred hhhhHHHHHHHHHHHHHHHHHH-hhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchHHH
Q 014600 123 KVETISYCVFAAIFNVGWAATQ-VAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQ 201 (422)
Q Consensus 123 ~~~~~~~~~~~~l~~~~~~~~~-~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~~~~~~ 201 (422)
.+. .+....++..+++... ....++..|..+ +++|++..+..+...++|+++++.+.+.+.+. .+
T Consensus 382 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~----------~~ 447 (481)
T TIGR00879 382 GNV---AIVFILLFIAFFAMGWGPVPWVIVSEIFP-LSLRPKGISIAVAANWLANFIVGFLFPTMLES----------IG 447 (481)
T ss_pred hHH---HHHHHHHHHHHHHccccCeehhhhhccCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------cC
Confidence 111 1111123333333222 333455677765 67899999999888899888877666555432 25
Q ss_pred HHHHHHHHHHHHHHHHhhhhccccCcc
Q 014600 202 YRWIAYSSIFIGCCFVGIFLSRTEEPR 228 (422)
Q Consensus 202 ~~~~~~i~~~i~~i~~~i~~~~~~E~~ 228 (422)
|.+.+.+.++++++..++.++..||++
T Consensus 448 ~~~~f~~~~~~~~~~~i~~~~~~~~~~ 474 (481)
T TIGR00879 448 VGGVFIFFGGLNVLGLIFVYFFLPETK 474 (481)
T ss_pred ccceehhHHHHHHHHHHHHheecccCC
Confidence 666666666777776666666667754
No 140
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.68 E-value=2.3e-06 Score=88.62 Aligned_cols=145 Identities=15% Similarity=0.050 Sum_probs=107.4
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCccchhhhHHHHHHHHHHHH
Q 014600 59 RGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNV 138 (422)
Q Consensus 59 ~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~ 138 (422)
...+++.++..+..++..++.|+++||+|||+. ++.+.++..++..+... +++ ...+.+.+++.++
T Consensus 89 ~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~-l~~~~~~~~iG~ii~~~-------a~~------~~~l~~GR~l~G~ 154 (513)
T KOG0254|consen 89 VRQGLLTSILNLGALVGSLLAGRLGDRIGRKKT-LLLAVVLFLIGAIIIAL-------APS------WYQLIVGRILTGL 154 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHH-HHHHHHHHHHHHHHHHH-------hhh------HHHHHHHHHHhcc
Confidence 455899999999999999999999999999988 55678888887766542 221 1234445568899
Q ss_pred HHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchHHHHHHHHHHHHHHHHHHHh
Q 014600 139 GWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVG 218 (422)
Q Consensus 139 ~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~~~~~~~~~~~~i~~~i~~i~~~ 218 (422)
+.+........+.+|+.+ ++.|+.+.+.-+....+|.+++..++.. .. +...+||....+..+.+++..+
T Consensus 155 g~G~~~~~~piy~sEiap-~~~RG~l~~~~~l~~~~Gi~~~~~~~~~-~~--------~~~~~Wr~~~~~~~i~~~~~~~ 224 (513)
T KOG0254|consen 155 GVGGASVLAPVYISEIAP-AHIRGTLVSLYQLFITIGILLGYCINYG-TS--------KVYAGWRIPLGLALIPAVILAL 224 (513)
T ss_pred chhhhhhcchhhHhhcCC-hhhhHHHHHHHHHHHHHHHHHHHHHhhh-hc--------cCCccHHHHHHHHHHHHHHHHH
Confidence 999988888999999986 6799999999988888877776433321 11 0014899887777777776665
Q ss_pred hhhccccCcc
Q 014600 219 IFLSRTEEPR 228 (422)
Q Consensus 219 i~~~~~~E~~ 228 (422)
. .++.+|.|
T Consensus 225 ~-~~~~pesp 233 (513)
T KOG0254|consen 225 G-MLFLPESP 233 (513)
T ss_pred H-HHhCCCCh
Confidence 5 77777764
No 141
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=98.68 E-value=9.9e-08 Score=97.24 Aligned_cols=139 Identities=9% Similarity=0.003 Sum_probs=93.3
Q ss_pred HHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhccc--CCchhHHH-HHHHHHHHHHHHhhcCcc
Q 014600 36 NDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRF--GHFKIWHG-AGSVLVAVSFSSVFGGCM 112 (422)
Q Consensus 36 ~~~~~~~~~~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~--Grrrp~ll-~g~i~~~i~~~~lf~~~~ 112 (422)
..........+++.|.++.|.+..++|.++++..+...+..|+.|+++||. ++||..++ .+.+..+++..++.
T Consensus 253 ~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~---- 328 (455)
T TIGR00892 253 MFLGFFAPIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCA---- 328 (455)
T ss_pred HHHHccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHH----
Confidence 333334445678888877799999999999999999999999999999973 33333222 22222222222211
Q ss_pred CccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 014600 113 PCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFS 188 (422)
Q Consensus 113 p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~ 188 (422)
..+ +.+ . +.+...+++++++....+..++..+..+ +++|++..+..+....+|+.+++.+.+.+.+
T Consensus 329 ---~~~--~~~-~---~~i~~~~~G~~~g~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~ 394 (455)
T TIGR00892 329 ---LAG--DYT-G---LVIYCIFFGLSFGSVGALLFEVLMDLVG-AQRFSSAVGLVTIVECCAVLIGPPLAGRLVD 394 (455)
T ss_pred ---Hhc--hHH-H---HHHHHHHHHHHhchHHHHHHHHHHHHhh-HHHHhhHHhHHHHHHHHHHHccccceeeeeh
Confidence 011 122 1 1222346778888777788888888875 5789999999888888888888766665554
No 142
>PRK15075 citrate-proton symporter; Provisional
Probab=98.67 E-value=1.2e-06 Score=88.66 Aligned_cols=139 Identities=12% Similarity=0.038 Sum_probs=83.5
Q ss_pred HHHHHHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCcccc
Q 014600 39 TAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRIL 117 (422)
Q Consensus 39 ~~~~~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~ 117 (422)
.+.....|+|.|+++. |++..+.+++..+..+...+..++.|+++||+||||..+..+..........+.. .+
T Consensus 253 ~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~--~~---- 326 (434)
T PRK15075 253 SFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSW--LV---- 326 (434)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHH--HH----
Confidence 3445567899999987 9999999999888889999999999999999999988554322222222111111 01
Q ss_pred CCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHH-HHHHHHHHHHHHHHHHHHh
Q 014600 118 STSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRN-AFTMVANLSLYAIAFIVFS 188 (422)
Q Consensus 118 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~-~~~~ig~~l~~~~~~~l~~ 188 (422)
...+.. . ......+.+++++....+..++..|..+ +++|+...++.. .+..+++.+++.+.+.+.+
T Consensus 327 ~~~~~~-~---~~~~~~~~~~~~g~~~~~~~~~~~e~~p-~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~ 393 (434)
T PRK15075 327 AAPSFA-R---MLAVELWLSFLYGSYNGAMVVALTEVMP-AEVRTAGFSLAYSLATAIFGGFTPAISTWLIH 393 (434)
T ss_pred cCCchH-H---HHHHHHHHHHHHHHHHhhHHHHHHHHCC-CCccchheeHHHHHHHHHHhhhHHHHHHHHHH
Confidence 111111 1 1111123345555555556677888876 578988877643 3333334445544444444
No 143
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=98.66 E-value=5.8e-07 Score=88.23 Aligned_cols=159 Identities=15% Similarity=0.129 Sum_probs=109.1
Q ss_pred HHHHHHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCcccc
Q 014600 39 TAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRIL 117 (422)
Q Consensus 39 ~~~~~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~ 117 (422)
......+|+-+|++|+ |+|...+++++.+..+...+.+.+.|++.|| +.||. +.....+.++....+.. .+
T Consensus 226 g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~-l~~~~~l~a~~~l~l~~--~~---- 297 (394)
T COG2814 226 GHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRA-LIAALLLLALALLALTF--TG---- 297 (394)
T ss_pred chhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhH-HHHHHHHHHHHHHHHHH--hc----
Confidence 3345568999999999 9999999999999999999999999999999 77766 44444555555444331 11
Q ss_pred CCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCc
Q 014600 118 STSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHAD 197 (422)
Q Consensus 118 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~~ 197 (422)
.+.+.. ... ..+++...+.....+....++. .||.++...+......++|..++..+++.+++.
T Consensus 298 --~~~~~~-~~~---~~~wg~a~~~~~~~~~~~~a~~--~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~-------- 361 (394)
T COG2814 298 --ASPALA-LAL---LFLWGFAFSPALQGLQTRLARL--APDAADLAGSLNVAAFNLGIALGAALGGLVLDA-------- 361 (394)
T ss_pred --chHHHH-HHH---HHHHHHHhhhhhhHHHHHhccc--CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------
Confidence 112111 111 1235555554444555555552 367899999999999999999999999888763
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhcc
Q 014600 198 LENQYRWIAYSSIFIGCCFVGIFLSR 223 (422)
Q Consensus 198 ~~~~~~~~~~i~~~i~~i~~~i~~~~ 223 (422)
.|+....++.+++.+++..+....
T Consensus 362 --~g~~~~~~~~a~l~~~a~~~~~~~ 385 (394)
T COG2814 362 --LGYAATGWVGAALLLLALLLALLS 385 (394)
T ss_pred --hchHHHHHHHHHHHHHHHHHHHHH
Confidence 366666666666666655555443
No 144
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.63 E-value=4.1e-07 Score=92.80 Aligned_cols=179 Identities=13% Similarity=0.014 Sum_probs=102.5
Q ss_pred eeeeccchhHHHHHHHHHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHH------HHHHHH
Q 014600 27 LYYGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWH------GAGSVL 99 (422)
Q Consensus 27 ~~y~~g~~~~~~~~~~~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~l------l~g~i~ 99 (422)
+......+..........+|+|.|+.+. |.+..+.|.+..+..+...+..++.|+++||+++||... +...+.
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 343 (465)
T TIGR00894 264 WAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIG 343 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Confidence 3444555666666666778999999987 999999999999999999999999999999876543211 111111
Q ss_pred HHHHHHHhhcCccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHH
Q 014600 100 VAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSL 179 (422)
Q Consensus 100 ~~i~~~~lf~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~ 179 (422)
.......++. .+ .. ..+.. ..+.. ..+...+.+...........+.. ++.++...++.+..+.+|+.++
T Consensus 344 ~~~~~~~~~~--~~--~~-~~~~~-~~~~~---~~l~~~~~~~~~~~~~~~~~~~~--~~~~g~~~g~~~~~~~l~~~i~ 412 (465)
T TIGR00894 344 GLGPGIFAYA--LP--YL-SAAFY-LTIII---LTLANAVSSGPLAGVLINSLDLA--PRFLGFIKGITGLPGFIGGLIA 412 (465)
T ss_pred HHHHHHHHHH--HH--Hc-CCchH-HHHHH---HHHHHHHhhhhhhhhhhchhhcC--hhHHHHHHHHHHHHHHHHHHHH
Confidence 1110111110 01 00 01111 11111 11233333333444445555654 3467888888877777777766
Q ss_pred HHHHHHHHhhccCCCCCchHHHHHHHHHHHHHHHHHHHhhhhcc
Q 014600 180 YAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSR 223 (422)
Q Consensus 180 ~~~~~~l~~~~~~~g~~~~~~~~~~~~~i~~~i~~i~~~i~~~~ 223 (422)
+.+.+.+.+. +...+|...+.+.+++.+++.++..+.
T Consensus 413 p~l~g~~~~~-------~~~~~~~~~f~~~~~~~~i~~i~~~~~ 449 (465)
T TIGR00894 413 STLAGNILSQ-------DSKNVWLIVFLIMAFVNILCVIFYLIF 449 (465)
T ss_pred HHhhheeeCC-------CCchHHHHHHHHHHHHHHHHHHHeeee
Confidence 5444333221 112358888888777777766555443
No 145
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.62 E-value=7.2e-07 Score=91.18 Aligned_cols=144 Identities=15% Similarity=0.071 Sum_probs=102.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCcc
Q 014600 34 MLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCM 112 (422)
Q Consensus 34 ~~~~~~~~~~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~ 112 (422)
+...........++|.|+++. |.++.+.|.++....+...+..|+.|++.||+|||+. +..+....+++..++...
T Consensus 265 ~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~-~~~g~~~~~~~~~~~~~~-- 341 (485)
T TIGR00711 265 SLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKL-VTIGLILYAVGFYWRAFT-- 341 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHH-HHHHHHHHHHHHHHHhcc--
Confidence 333444444556789999998 9999999999999999999999999999999999877 556777777666554311
Q ss_pred CccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 014600 113 PCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFS 188 (422)
Q Consensus 113 p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~ 188 (422)
..++.+.+.. ....++.+++.+....|......+..+ +++|++..+..+....+|+.++..+.+.+.+
T Consensus 342 ---~~~~~~~~~~----~~~~~l~g~g~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~ 409 (485)
T TIGR00711 342 ---FTPDTPFLAI----ALPQFIRGFGMGCFFMPLTTIALSGLP-PHKIARGSSLSNFTRQLGGSIGTALITTILT 409 (485)
T ss_pred ---CCCCCCHHHH----HHHHHHHHHHHHHHHHHHHHHHHhcCC-HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0112222211 111235777777777777776666654 6789999999888888888888777666554
No 146
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.61 E-value=5.1e-06 Score=81.80 Aligned_cols=223 Identities=13% Similarity=0.056 Sum_probs=127.5
Q ss_pred eeeeccchhHH---HHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHH
Q 014600 27 LYYGSGHMLND---ITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVS 103 (422)
Q Consensus 27 ~~y~~g~~~~~---~~~~~~~~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~ 103 (422)
+.+++-.+.|. +.+..++.|...|| | +...+-+..+++.++........-|+.||+|-|-. .+.++++.+++
T Consensus 48 l~~slL~~SN~~qWI~ya~i~n~~~~~Y---g-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a-~llgt~ln~iG 122 (480)
T KOG2563|consen 48 LAFSLLNFSNGMQWIQYAPINNYVNSFY---G-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTA-LLLGTVLNGIG 122 (480)
T ss_pred HHHHHHHhcCcchheeehhHHHHHHHHh---c-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHH-HHHHHHHHHHH
Confidence 44444444443 33334444444444 4 66677788888888888888889999999999888 55788888887
Q ss_pred HHHhhcCccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHH
Q 014600 104 FSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIA 183 (422)
Q Consensus 104 ~~~lf~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~ 183 (422)
..+=-.+..| +.+ +..+..+.. .-..+-...+.++.. ..+-+++.-..++||..+.+...++..+|..++..++
T Consensus 123 a~Ir~iss~p--~v~--~~f~~~l~~-~Gq~iaa~Aq~Fim~-lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llp 196 (480)
T KOG2563|consen 123 AWIRLISSLP--FVP--PLFRRPLTH-TGQSIAAAAQPFILG-LPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLP 196 (480)
T ss_pred HHHhhhccCc--ccc--ccchhhhhH-HhHHHHHHhhhHhhc-cccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhcc
Confidence 6542211112 011 111111111 111233333333222 1223333334579999999999999899998888776
Q ss_pred HHHHhhccCCCCCchHHHHHH--HHHHHHHHHHHHHhhhhccccCccccccc-----CCCcchhhhHHHHHHhHHHHHHH
Q 014600 184 FIVFSVSTAKTHADLENQYRW--IAYSSIFIGCCFVGIFLSRTEEPRLKMGL-----RGNSHARISWAYWFKKILYYQVA 256 (422)
Q Consensus 184 ~~l~~~~~~~g~~~~~~~~~~--~~~i~~~i~~i~~~i~~~~~~E~~~~~~~-----~~~~~~~~~~~~~~~n~~f~~~~ 256 (422)
+.++..- ..++...|.. +++....++.+...++.+..+|+|..++. +.+.+..+++++.+||++|...+
T Consensus 197 pilV~~~----~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~s~~~~~~~~f~~si~~~~~n~~F~il~ 272 (480)
T KOG2563|consen 197 PILVPSS----KDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPSASQAALQDASFPKSIKSCFKNRQFIILA 272 (480)
T ss_pred ceecCCC----CCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHhhhhcCcHHHHHHHHHcCccHHHHH
Confidence 4444321 1122345544 34445555555545555555554432221 11245788899999999998877
Q ss_pred HHHHHHHH
Q 014600 257 LVYMLTRL 264 (422)
Q Consensus 257 ~~~~~~~~ 264 (422)
.+|-....
T Consensus 273 ~~ygi~~g 280 (480)
T KOG2563|consen 273 ICYGIGLG 280 (480)
T ss_pred HHHhhhHH
Confidence 66655433
No 147
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.61 E-value=6.3e-06 Score=79.44 Aligned_cols=114 Identities=18% Similarity=0.143 Sum_probs=78.0
Q ss_pred CCceeeeeeeccchhHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHH
Q 014600 21 VGRWSVLYYGSGHMLNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLV 100 (422)
Q Consensus 21 l~~~~~~~y~~g~~~~~~~~~~~~~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~ 100 (422)
+.++-...|.+...+. -+-++|+-..|.+.|++..+++.++..+....++..|+.|.++||+||||..++. +++.
T Consensus 35 Fqr~yl~vY~La~~aD----WLQGpY~Y~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~-cily 109 (354)
T PF05631_consen 35 FQRKYLLVYLLAMAAD----WLQGPYLYALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLF-CILY 109 (354)
T ss_pred HHHHHHHHHHHHHHHH----HhhcchhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHH-HHHH
Confidence 3333445666654333 3345666666665699999999999999999999999999999999999997654 5666
Q ss_pred HHHHHHhhcCccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhh
Q 014600 101 AVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNC 153 (422)
Q Consensus 101 ~i~~~~lf~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~ 153 (422)
+++....- .++ .. ..++-+++-+++.+....++.+++-.
T Consensus 110 ~~scl~k~--------~~~--~~----~L~~GRvlgGiaTSLLfS~FEsW~V~ 148 (354)
T PF05631_consen 110 SLSCLTKH--------SSN--YP----VLLLGRVLGGIATSLLFSAFESWMVH 148 (354)
T ss_pred HHHHHHHh--------ccc--cH----HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66654322 111 11 12233456788888888788887543
No 148
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=98.61 E-value=1.1e-06 Score=87.95 Aligned_cols=134 Identities=9% Similarity=0.007 Sum_probs=86.6
Q ss_pred HHHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCc
Q 014600 42 CWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTS 120 (422)
Q Consensus 42 ~~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~ 120 (422)
.+..+.|.|+.+. |.++.+.|.......+...+..++.|+++||+||||. +..+.+..+++..++.. .|. ....
T Consensus 233 ~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~-~~~~~~~~~~g~~~~~~--~~~--~~~~ 307 (406)
T PRK15402 233 AWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSL-IRMGLWPMVAGLLLAAL--ATV--ISSH 307 (406)
T ss_pred HHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHH-HHHHHHHHHHHHHHHHH--HHH--cccc
Confidence 3445568888887 9999999988877777788889999999999999887 55666666655544321 010 0011
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 014600 121 TLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIV 186 (422)
Q Consensus 121 ~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l 186 (422)
+..+ ..+..++++.+.+....+..+.... .. +++|++..+..+....+|..+++.+...+
T Consensus 308 ~~~~----~~~~~~~~g~g~~~~~~~~~~~~~~-~~-~~~~g~~~~~~~~~~~~~~~~g~~~~~~l 367 (406)
T PRK15402 308 AYLW----LTAGLSLYAFGIGLANAGLYRLTLF-SS-DVSKGTVSAAMGMLSMLIFTVGIELSKHA 367 (406)
T ss_pred cHHH----HHHHHHHHHHHHHHHhhhHHHHHhh-hc-cccccHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 1111 1122235666666655555444432 23 47899999998888888877766555444
No 149
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.61 E-value=4.8e-07 Score=91.45 Aligned_cols=64 Identities=11% Similarity=0.157 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHH
Q 014600 40 AACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFS 105 (422)
Q Consensus 40 ~~~~~~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~ 105 (422)
+.....++|+|+++. .+...+.....+..+..++..|+.|+++||+|+||. +.++.+...+...
T Consensus 268 fvg~s~~lp~~~~~~-~~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~v-l~~~~i~~~i~~~ 331 (462)
T PRK15034 268 FIGFSAGFAMLAKTQ-FPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRV-TLINFIFMAIFSA 331 (462)
T ss_pred HHHHHHHHHHHHHHH-cChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHH-HHHHHHHHHHHHH
Confidence 333455788887774 444444444556788999999999999999999987 4455555555543
No 150
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.60 E-value=1e-06 Score=86.48 Aligned_cols=139 Identities=12% Similarity=0.106 Sum_probs=95.0
Q ss_pred HHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccc
Q 014600 37 DITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRI 116 (422)
Q Consensus 37 ~~~~~~~~~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~ 116 (422)
...+.....++|.|+++.|.++.+.|.+.++..+...+..++.|+++||+|+||..+..+....+++...+.. .|
T Consensus 210 ~~~~~~~~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~--~~--- 284 (355)
T TIGR00896 210 SGLYYSLIGWLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLF--AP--- 284 (355)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHH--hh---
Confidence 3344455678898988779999999999999999999999999999999976665566666666666544332 11
Q ss_pred cCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 014600 117 LSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSV 189 (422)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~ 189 (422)
+. . ... + .++++++++.......+...+..+++++++...++.+....++..+++.+.+.+.+.
T Consensus 285 --~~--~-~~~-~---~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~ 348 (355)
T TIGR00896 285 --MH--G-LWA-W---ALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDI 348 (355)
T ss_pred --hh--H-HHH-H---HHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 1 111 1 235677776655555555555555566778888877777777777777666666554
No 151
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.60 E-value=2.3e-05 Score=75.72 Aligned_cols=159 Identities=10% Similarity=-0.055 Sum_probs=96.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCC-----CCC-chHH
Q 014600 127 ISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAK-----THA-DLEN 200 (422)
Q Consensus 127 ~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~-----g~~-~~~~ 200 (422)
..+++...+.+.+.++.++..+++++++.+ +|+|++-.++.+.+..+|.++++.+...++...... +.. ....
T Consensus 11 ~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~-~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~~~~~ 89 (310)
T TIGR01272 11 VLFLGALFVLASGLTILQVAANPYVSILGP-IETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATANAEAA 89 (310)
T ss_pred HHHHHHHHHHHhhHHHHHhhHHHHHHHHCC-cchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhhHHHH
Confidence 344444456888899999999999999975 567888888889999999999988887666421100 000 0124
Q ss_pred HHHHHHHHHHHHHHHHH-hhhhccccCcccccccCCCcchhhhHHHHHHhHHHHHHHHHHHHHHHHHHhhhHHHHHHhhh
Q 014600 201 QYRWIAYSSIFIGCCFV-GIFLSRTEEPRLKMGLRGNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVIN 279 (422)
Q Consensus 201 ~~~~~~~i~~~i~~i~~-~i~~~~~~E~~~~~~~~~~~~~~~~~~~~~~n~~f~~~~~~~~~~~~~~~~~~~y~~~y~~~ 279 (422)
.|++...+.+.+..+.. +..+...+|.+.++++++..+.....+..+|+|.++...+..++......+...|++.|+.+
T Consensus 90 ~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~ 169 (310)
T TIGR01272 90 KVHTPYLLLAGALAVLAIIFAFLPLPELQEADVARVSSGDTTQKTSAFQFTHLVLGALGIFVYVGAEVSAGSFLVNFLSD 169 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCCCCCcccccccccccccchhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 67777775554433333 22233344432221111110111122457788887766555555555667888999999975
Q ss_pred c--cCccch
Q 014600 280 D--LRMGQS 286 (422)
Q Consensus 280 ~--~~l~~~ 286 (422)
. .++++.
T Consensus 170 ~~~~g~s~~ 178 (310)
T TIGR01272 170 PHALGLPED 178 (310)
T ss_pred cccCCCCHH
Confidence 4 466543
No 152
>PRK03893 putative sialic acid transporter; Provisional
Probab=98.59 E-value=7.9e-07 Score=91.33 Aligned_cols=132 Identities=11% Similarity=0.044 Sum_probs=87.3
Q ss_pred HHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCccc
Q 014600 44 FTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTL 122 (422)
Q Consensus 44 ~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~ 122 (422)
..++|.|+++. |.++.++|.+.+...+...+..++.|+++||+||||.++ .+.....+....+.. ......
T Consensus 295 ~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~-~~~~~~~~~~~~~~~-------~~~~~~ 366 (496)
T PRK03893 295 QALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYV-CSLLISQLLIIPVFA-------IGGANV 366 (496)
T ss_pred HHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHH-HHHHHHHHHHHHHhh-------ccccHH
Confidence 45788899766 999999999999999999999999999999999998854 444444444332221 011111
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 014600 123 KVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFS 188 (422)
Q Consensus 123 ~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~ 188 (422)
+ . ... ...+.+...........++..+..+ +++|++..++.+....+|+.+++.+.+.+.+
T Consensus 367 ~-~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~ 427 (496)
T PRK03893 367 W-V--LGL-LLFFQQMLGQGISGLLPKLIGGYFD-TEQRAAGLGFTYNVGALGGALAPILGALIAQ 427 (496)
T ss_pred H-H--HHH-HHHHHHHHhcccchhhHHHHHhhCC-HHHhhcccchhhhhhhHHHHHHHHHHHHHhc
Confidence 1 1 111 1111222222233455667778775 5789999998888888888888777665554
No 153
>PRK10091 MFS transport protein AraJ; Provisional
Probab=98.58 E-value=9.8e-07 Score=87.65 Aligned_cols=131 Identities=13% Similarity=0.154 Sum_probs=80.2
Q ss_pred HHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCcc
Q 014600 43 WFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTST 121 (422)
Q Consensus 43 ~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~ 121 (422)
+.+|+++|+.+. |.++.+.+.+..+..+...+..++.|+++||+||||. +..+....+++..++.. . . + +
T Consensus 218 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~-~~~~~~~~~i~~~~~~~---~---~-~-~ 288 (382)
T PRK10091 218 WFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRI-AAVTDFIIVLALLMLFF---F---G-G-M 288 (382)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhH-HHHHHHHHHHHHHHHHH---H---H-h-h
Confidence 446778888887 9999999999999999999999999999999999877 44566666665544321 0 1 1 1
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 014600 122 LKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFS 188 (422)
Q Consensus 122 ~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~ 188 (422)
.+ .. .+...+.+.++.....|......+...++++++... .+....+|..+++.+.+.+.+
T Consensus 289 ~~-~~---~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~Gp~~~G~l~~ 349 (382)
T PRK10091 289 KT-AS---LIFAFICCAGLFALSAPLQILLLQNAKGGELLGAAG--GQIAFNLGSAIGAYCGGMMLT 349 (382)
T ss_pred HH-HH---HHHHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHHH--HHHHHHHHHHHHHHHhHHHHH
Confidence 11 11 111123344443333443333333333334444432 244567777777777666655
No 154
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.58 E-value=1.4e-06 Score=86.67 Aligned_cols=166 Identities=15% Similarity=0.063 Sum_probs=101.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHh-hhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCcc
Q 014600 34 MLNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIAD-GFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCM 112 (422)
Q Consensus 34 ~~~~~~~~~~~~~l~~f~t~~gls~~~~g~i~~i~~l~~-ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~ 112 (422)
+..........++.+.|+.|.|.++.++|.+..+..+.. .+...+.|++.||+|+||... .+....++.....+. .
T Consensus 218 ~l~~~~~~~~~~~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~-~~~~~~~~~~~~~~~--~ 294 (390)
T TIGR02718 218 LLSAMTAVSGFGLSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFI-LGVGLAGSLALLWFA--Q 294 (390)
T ss_pred HHHHHHHHHHHHHhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHH-HHHHHHHHHHHHHHH--H
Confidence 344444455567888899888999999999998876544 455789999999999988744 444443222222110 0
Q ss_pred CccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 014600 113 PCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTA 192 (422)
Q Consensus 113 p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~ 192 (422)
...+. ..... ..+. ...+.+++.+....+..+...+..+++++|++..+..+...++|..+++.+.+.+.+.
T Consensus 295 ~~~~~-~~~~~---~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~--- 366 (390)
T TIGR02718 295 AAFWL-APGIA---VAWS-CSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDR--- 366 (390)
T ss_pred HHccc-CCcHH---HHHH-HHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH---
Confidence 00000 00111 1111 1123345556666666677666665457889988888888899998888887776653
Q ss_pred CCCCchHHHHHHHHHHHHHHHHHHH
Q 014600 193 KTHADLENQYRWIAYSSIFIGCCFV 217 (422)
Q Consensus 193 ~g~~~~~~~~~~~~~i~~~i~~i~~ 217 (422)
.||+..+.+.+.+.++..
T Consensus 367 -------~G~~~~f~~~~~~~l~a~ 384 (390)
T TIGR02718 367 -------FGYAGGFLSGTVLAVLAI 384 (390)
T ss_pred -------HccHHHHHHHHHHHHHHH
Confidence 245555555544444433
No 155
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.58 E-value=7.7e-07 Score=89.87 Aligned_cols=153 Identities=18% Similarity=0.169 Sum_probs=110.9
Q ss_pred eeeeeeccchhHHHHHHHHHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHH
Q 014600 25 SVLYYGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVS 103 (422)
Q Consensus 25 ~~~~y~~g~~~~~~~~~~~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~ 103 (422)
....+-...+...+...+.+++.++|.+++ |.+ ...+.+..+..+...+..|++++++||+||||.++ .+....+++
T Consensus 226 ~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~-~~~~~~~~~ 303 (428)
T PF13347_consen 226 PFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYI-IGLLLAALG 303 (428)
T ss_pred hHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehh-hhHHHHHHH
Confidence 334455556666777777778888899987 777 66788888889999999999999999999999855 567777776
Q ss_pred HHHhhcCccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccc------hhhHHHHHHHHHHHHHH
Q 014600 104 FSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTS------RVVLTSCRNAFTMVANL 177 (422)
Q Consensus 104 ~~~lf~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~e------R~~l~~~~~~~~~ig~~ 177 (422)
...++. .| ..+.++ +.+..++.+++++.......++.+|..+.+++ .+...+..+....++..
T Consensus 304 ~~~~~~--~~-----~~~~~~----~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~ 372 (428)
T PF13347_consen 304 FLLLFF--LG-----PGSPWL----VLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQG 372 (428)
T ss_pred HHHHHH--HH-----hhhHHH----HHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHH
Confidence 665543 12 112221 22333468888888888889999999864322 25678888888888888
Q ss_pred HHHHHHHHHHhhc
Q 014600 178 SLYAIAFIVFSVS 190 (422)
Q Consensus 178 l~~~~~~~l~~~~ 190 (422)
++..+.+.+++..
T Consensus 373 la~~i~g~~l~~~ 385 (428)
T PF13347_consen 373 LAGAIVGLLLALV 385 (428)
T ss_pred HHHHHHHHHHHHh
Confidence 8887777777654
No 156
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.57 E-value=8e-07 Score=89.61 Aligned_cols=145 Identities=12% Similarity=0.128 Sum_probs=96.6
Q ss_pred cchhHHHHHHHHHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcC
Q 014600 32 GHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGG 110 (422)
Q Consensus 32 g~~~~~~~~~~~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~ 110 (422)
..+...........+.++|.++. | ++...+.+..+..+...+..|+.|+++||+||||.+ ..+....+++...++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~-~~~~~~~~~~~~~~~~- 306 (437)
T TIGR00792 230 AYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILF-AGGILLMVLGYLIFFF- 306 (437)
T ss_pred HHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH-HHHHHHHHHHHHHHHH-
Confidence 33334444444444444555555 6 566778888888889999999999999999999885 4566666666554432
Q ss_pred ccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCC------ccchhhHHHHHHHHHHHHHHHHHHHHH
Q 014600 111 CMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLN------STSRVVLTSCRNAFTMVANLSLYAIAF 184 (422)
Q Consensus 111 ~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~------~~eR~~l~~~~~~~~~ig~~l~~~~~~ 184 (422)
.+ .+.+ . ..+..++.+++.+..+....++.+|..+. +++++...+..+....+|..+++.+.+
T Consensus 307 ------~~-~~~~-~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g 375 (437)
T TIGR00792 307 ------AG-SNLP-L---ILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVG 375 (437)
T ss_pred ------cc-hhHH-H---HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 1111 1 12222356777777777888888887641 344678888888888999988888887
Q ss_pred HHHhhc
Q 014600 185 IVFSVS 190 (422)
Q Consensus 185 ~l~~~~ 190 (422)
.+++..
T Consensus 376 ~ll~~~ 381 (437)
T TIGR00792 376 LILGII 381 (437)
T ss_pred HHHHHc
Confidence 777654
No 157
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.56 E-value=3.7e-06 Score=85.00 Aligned_cols=126 Identities=13% Similarity=0.087 Sum_probs=78.4
Q ss_pred HHHHHHHHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCcc
Q 014600 37 DITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCR 115 (422)
Q Consensus 37 ~~~~~~~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~ 115 (422)
...+....+|+|.|+.+. |.+..+.+....+..+...+..++.|+++||+||||..+ .+.+..++....++. ..+
T Consensus 256 ~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~-~~~~~~~~~~~~~~~-~~~-- 331 (432)
T PRK10406 256 SLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSML-CFGSLAALFTVPILS-ALQ-- 331 (432)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHH-HHHHHHHHHHHHHHH-HHH--
Confidence 344445667899999887 999999999999988888999999999999999998754 343333322221110 000
Q ss_pred ccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHH
Q 014600 116 ILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTM 173 (422)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ 173 (422)
...+.. .....+ .+.....+....+..++.+|+.+ ++.|+...++.+..++
T Consensus 332 --~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~e~fp-~~~r~t~~g~~~~~g~ 382 (432)
T PRK10406 332 --NVSSPY-AAFGLV---MCALLIVSFYTSISGILKAEMFP-AQVRALGVGLSYAVAN 382 (432)
T ss_pred --cCCcHH-HHHHHH---HHHHHHHHHHHHHHHHHHHHHCC-CCccchhhhHHHHHHH
Confidence 011111 111111 11222233333456678899987 5789999998765544
No 158
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.56 E-value=1.3e-06 Score=90.10 Aligned_cols=136 Identities=20% Similarity=0.161 Sum_probs=98.8
Q ss_pred HHHHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCC
Q 014600 41 ACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILST 119 (422)
Q Consensus 41 ~~~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~ 119 (422)
.....|++.|++++ |.++.++|..+....+...+..|+.|+++||+|||+. +..+.+..+++..++.. .. .+
T Consensus 276 ~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~-~~~g~~~~~~~~~~l~~--~~----~~ 348 (495)
T PRK14995 276 VGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLV-ATGGMALSALSFYGLAM--TD----FS 348 (495)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHH-HHHHHHHHHHHHHHHHH--hc----CC
Confidence 33446788899998 9999999999999999999999999999999998765 66677776666554321 01 11
Q ss_pred ccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 014600 120 STLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFS 188 (422)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~ 188 (422)
.+.+ ... ...++.+++.+....+......+..+ +++|+...+..+....+|+.++..+.+.+++
T Consensus 349 ~~~~-~~~---~~~~l~G~g~g~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 349 TQQW-QAW---GLMALLGFSAASALLASTSAIMAAAP-PEKAAAAGAIETMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred CchH-HHH---HHHHHHHHhHHHHHHHHHHHHHhcCC-HHhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1222 111 12246788888777777777777654 6789999998888888888887777666654
No 159
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=98.55 E-value=1.4e-06 Score=93.22 Aligned_cols=142 Identities=15% Similarity=-0.005 Sum_probs=93.4
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCccchhhhHHHHHHHHHHHHH
Q 014600 60 GAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVG 139 (422)
Q Consensus 60 ~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~ 139 (422)
...+..++..+...+..++.|+++||+|||+. ++.+.++.+++..++.. .++ .... +++.++++.+
T Consensus 596 ~~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~-l~~~~~lsai~~ll~~~-------~~s--~~~l----l~~~~l~g~~ 661 (742)
T TIGR01299 596 MIYFVNFLGTLAVLPGNIVSALLMDKIGRLRM-LAGSMVLSCISCFFLSF-------GNS--ESAM----IALLCLFGGL 661 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH-HHHHHHHHHHHHHHHHH-------Hcc--HHHH----HHHHHHHHHH
Confidence 34566777788889999999999999999887 55677777766544321 111 1111 1112344555
Q ss_pred HHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchHHHHHHHHHHHHHHHHHHHhh
Q 014600 140 WAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGI 219 (422)
Q Consensus 140 ~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~~~~~~~~~~~~i~~~i~~i~~~i 219 (422)
.+.......++.+|+.+ .++|++..++.+..+.+|+++++.+++.+... +...++++.+++.+++.++
T Consensus 662 ~~~~~~~~~a~~aEl~P-t~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-----------~~~~pf~i~a~~lll~~ll 729 (742)
T TIGR01299 662 SIAAWNALDVLTVELYP-SDKRATAFGFLNALCKAAAVLGILIFGSFVGI-----------TKAAPILFASAALACGGLL 729 (742)
T ss_pred HHHHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----------hhHHHHHHHHHHHHHHHHH
Confidence 55555566788999987 57899999999999999999988777655432 2334555555555554444
Q ss_pred hhccccCcc
Q 014600 220 FLSRTEEPR 228 (422)
Q Consensus 220 ~~~~~~E~~ 228 (422)
.+ .+||.+
T Consensus 730 ~~-~LPET~ 737 (742)
T TIGR01299 730 AL-KLPDTR 737 (742)
T ss_pred HH-hCCCCc
Confidence 44 447753
No 160
>PRK09848 glucuronide transporter; Provisional
Probab=98.54 E-value=1.4e-06 Score=88.51 Aligned_cols=150 Identities=12% Similarity=0.054 Sum_probs=98.6
Q ss_pred eeccchhHHHHHHHHHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHh
Q 014600 29 YGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSV 107 (422)
Q Consensus 29 y~~g~~~~~~~~~~~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~l 107 (422)
+....+.............++|++++ |.++...++......+...+..|+.++++||+|+||.+ ..|.++.+++..++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~-~~g~~~~~i~~~~~ 311 (448)
T PRK09848 233 LCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTF-LIGALLGTCGYLLF 311 (448)
T ss_pred HHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH-HHHHHHHHHHHHHH
Confidence 33444444444444555667777777 88776666555555666778899999999999998885 45777777766554
Q ss_pred hcCccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCcc------chhhHHHHHHHHHHHHHHHHHH
Q 014600 108 FGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNST------SRVVLTSCRNAFTMVANLSLYA 181 (422)
Q Consensus 108 f~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~------eR~~l~~~~~~~~~ig~~l~~~ 181 (422)
+. .| ..+.+ . ..+...+.+++.+....+..++.+|..+..+ +++...+..+....+|..++..
T Consensus 312 ~~--~~-----~~~~~-~---~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~ 380 (448)
T PRK09848 312 FW--VS-----VWSLP-V---ALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGS 380 (448)
T ss_pred HH--cC-----chhHH-H---HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHH
Confidence 42 11 11222 1 1122245778888888888999998875321 2467778888888888888887
Q ss_pred HHHHHHhhc
Q 014600 182 IAFIVFSVS 190 (422)
Q Consensus 182 ~~~~l~~~~ 190 (422)
+.+.+++..
T Consensus 381 i~g~~l~~~ 389 (448)
T PRK09848 381 IPAFILGLS 389 (448)
T ss_pred HHHHHHHHc
Confidence 776666643
No 161
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=98.53 E-value=1.3e-06 Score=85.18 Aligned_cols=130 Identities=9% Similarity=0.043 Sum_probs=97.6
Q ss_pred HHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCccch
Q 014600 45 TYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLK 123 (422)
Q Consensus 45 ~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~~ 123 (422)
.+.|+|.++. |.++.+.|.+..+..+...+..++.|++.||+|||+.. ..+....+++...+.. .+. +.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~-------~~~-~~~ 302 (365)
T TIGR00900 232 ALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALM-TGAIFVIGLAILVVGL-------TPP-NFP 302 (365)
T ss_pred HHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHH-HHHHHHHHHHHHHHHh-------hch-hHH
Confidence 6678888886 99999999999999999999999999999999998874 4455555555443321 111 111
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 014600 124 VETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFS 188 (422)
Q Consensus 124 ~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~ 188 (422)
...+..++.+++++....+..++..|..+ +++|++..+..+....++..+++.+.+.+.+
T Consensus 303 ----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~ 362 (365)
T TIGR00900 303 ----LFLVLWFAIGVGYGPINVPQGTLLQRRVP-AELLGRVFGAQFSLSHAAWPLGLILAGPLAD 362 (365)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 12222346778888888888899999876 6889999999999999998888877766654
No 162
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=98.53 E-value=1.9e-06 Score=85.54 Aligned_cols=134 Identities=13% Similarity=0.032 Sum_probs=91.2
Q ss_pred HHHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCc
Q 014600 42 CWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTS 120 (422)
Q Consensus 42 ~~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~ 120 (422)
....+++.|+++. |.++.+.+.+.....+...+..++.|+++||+||||... .+.+...+....++. . ..
T Consensus 256 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~-~~~~~~~~~~~~~~~-------~-~~ 326 (405)
T TIGR00891 256 PIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYV-CSLLAGQLLIIPVFA-------I-GA 326 (405)
T ss_pred hhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhH-HHHHHHHHHHHHHHH-------h-CC
Confidence 4446778888887 999999999999999999999999999999999998844 444443333222221 0 11
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 014600 121 TLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSV 189 (422)
Q Consensus 121 ~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~ 189 (422)
+.+.. .+...+.+.+.........++..|..+ +++|++..+..+....+|..+++.+.+.+.+.
T Consensus 327 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~ 390 (405)
T TIGR00891 327 NVAVL----GLGLFFQQMLVQGIWGILPKHLGEYFP-TDQRAAGLGFTYQLGNLGGALAPIIGALLAQR 390 (405)
T ss_pred chHHH----HHHHHHHHHHHccchhhHHHHHhhhCC-cchhHHHhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 11111 111122333333444455677888875 67899999998888888888888777666553
No 163
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.51 E-value=1.4e-06 Score=88.37 Aligned_cols=168 Identities=8% Similarity=-0.043 Sum_probs=97.1
Q ss_pred HHHHHHHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHH--HHHhhcCccCc
Q 014600 38 ITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVS--FSSVFGGCMPC 114 (422)
Q Consensus 38 ~~~~~~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~--~~~lf~~~~p~ 114 (422)
.......+|+|.|+++. |.++.+++++..+..+...+..++.|+++||+|++|... .+.+...+. ..+++. ..+
T Consensus 265 ~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~- 341 (438)
T TIGR00712 265 LLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGA-TGVFFMTLVTIAVIVYW-MNP- 341 (438)
T ss_pred HHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccH-HHHHHHHHHHHHHHHHH-hcC-
Confidence 33344557899999998 999999999999999999999999999999997544322 232222211 112121 011
Q ss_pred cccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHH-HHHHHHHHHHHhhccCC
Q 014600 115 RILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVAN-LSLYAIAFIVFSVSTAK 193 (422)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~-~l~~~~~~~l~~~~~~~ 193 (422)
..+.+ . ....+ ...+.+.............|..+ +++|++..++.+....+|+ .+++.+.+.+.+.
T Consensus 342 ----~~~~~-~-~~~~~--~~~g~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~---- 408 (438)
T TIGR00712 342 ----AGNPL-V-DMICM--IVIGFLIYGPVMLIGLHALELAP-KKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDF---- 408 (438)
T ss_pred ----CCchH-H-HHHHH--HHHHHHHccHHHHHHHHHHHhcC-hhheeeehhhhchHHHhhhhhhcchhHHHHHHh----
Confidence 11111 1 11111 12222211111112234556665 6789999998877666654 4566655555442
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHhhhhccccCc
Q 014600 194 THADLENQYRWIAYSSIFIGCCFVGIFLSRTEEP 227 (422)
Q Consensus 194 g~~~~~~~~~~~~~i~~~i~~i~~~i~~~~~~E~ 227 (422)
.+|.+.+.+...+.+++.+...+..||+
T Consensus 409 ------~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (438)
T TIGR00712 409 ------FGWDGGFMVMIGGSILAVILLIVVMIGE 436 (438)
T ss_pred ------ccchHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 2566666666555666666666666764
No 164
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.51 E-value=7.2e-06 Score=84.43 Aligned_cols=162 Identities=14% Similarity=0.090 Sum_probs=96.1
Q ss_pred HHHHHHHHHHHHHHHh-CCChhHHHHHH-HHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccc
Q 014600 39 TAACWFTYLLLFLTDI-GLSPRGAAAVM-LSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRI 116 (422)
Q Consensus 39 ~~~~~~~~l~~f~t~~-gls~~~~g~i~-~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~ 116 (422)
.......+.++|+.+. |.++.++|.+. ....+...+..++.|+++||+||||..+ .+.+..++.....+. .. .
T Consensus 237 ~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~-i~~~l~~l~~l~~~~--l~--~ 311 (491)
T PRK11010 237 GDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALM-IFGILQGVSNAGYWL--LS--I 311 (491)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH-HHHHHHHHHHHHHHH--HH--h
Confidence 3334455677888776 99999999997 4667788899999999999999988744 344443443322111 00 0
Q ss_pred cCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCC
Q 014600 117 LSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHA 196 (422)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~ 196 (422)
. ..+....... ..+..++.++...+..++..++.+ ++.+++..+..+...++|..+++.+.+.+.+.
T Consensus 312 ~-~~~~~~l~~~----~~l~~~~~g~~~~~~~a~~~~l~~-~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~------- 378 (491)
T PRK11010 312 T-DKNLYSMGAA----VFFENLCGGMGTAAFVALLMTLCN-KSFSATQFALLSALSAVGRVYVGPVAGWFVEA------- 378 (491)
T ss_pred c-cccHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHcC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------
Confidence 1 1111111111 123333344444556777778776 45567777777777777776665555555442
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhhh
Q 014600 197 DLENQYRWIAYSSIFIGCCFVGIFL 221 (422)
Q Consensus 197 ~~~~~~~~~~~i~~~i~~i~~~i~~ 221 (422)
.||+..+.+.+++++++.+++.
T Consensus 379 ---~G~~~~f~~~~~~~l~~l~~~~ 400 (491)
T PRK11010 379 ---HGWPTFYLFSVAAAVPGLLLLL 400 (491)
T ss_pred ---hChHHHHHHHHHHHHHHHHHHH
Confidence 3566666666666665544443
No 165
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=98.51 E-value=1.5e-06 Score=89.05 Aligned_cols=152 Identities=16% Similarity=-0.001 Sum_probs=88.3
Q ss_pred HHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCc-----hhHHHHHHHH-HHHHHHHhhcCccCcc
Q 014600 43 WFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHF-----KIWHGAGSVL-VAVSFSSVFGGCMPCR 115 (422)
Q Consensus 43 ~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grr-----rp~ll~g~i~-~~i~~~~lf~~~~p~~ 115 (422)
..++++.|+.+. |+++..++.+..+..+...+..++.|+++||+||| |.++...... .++... ++ +
T Consensus 271 ~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~-~~----~-- 343 (476)
T PLN00028 271 MDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCI-WL----G-- 343 (476)
T ss_pred HHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHH-Hh----c--
Confidence 446778888887 99999999999999999999999999999999875 2333222222 222221 11 1
Q ss_pred ccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCC
Q 014600 116 ILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTH 195 (422)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~ 195 (422)
..+ +.. ..+..+ ++++.+.........++.+++. +++|+...++.+.++++|+.+++. +... +
T Consensus 344 ~~~--~~~-~~~~~~---~l~~~~~~~~~~~~~~~~~~~~--~~~~g~~~g~~~~~g~lg~~i~~~----l~~~-~---- 406 (476)
T PLN00028 344 RAN--SLG-AAIVVM---ILFSIFVQAACGATFGIVPFVS--RRSLGVISGLTGAGGNVGAVLTQL----LFFT-G---- 406 (476)
T ss_pred ccc--hHH-HHHHHH---HHHHHHHHHhhhhhcccCcccC--hhhchhhhhhhhccccHHHHHHHH----HHHh-c----
Confidence 111 111 111111 2334444334444556666654 467888888876666666655443 2221 1
Q ss_pred CchHHHHHHHHHHHHHHHHHHHhhh
Q 014600 196 ADLENQYRWIAYSSIFIGCCFVGIF 220 (422)
Q Consensus 196 ~~~~~~~~~~~~i~~~i~~i~~~i~ 220 (422)
...+|...+.+.+++.+++.++.
T Consensus 407 --~~~~y~~~f~~~~~~~~i~~~~~ 429 (476)
T PLN00028 407 --SSYSTETGISLMGVMIIACTLPV 429 (476)
T ss_pred --CCccHhhHHHHHHHHHHHHHHHH
Confidence 11256666666665555554433
No 166
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=98.51 E-value=4.8e-06 Score=82.75 Aligned_cols=149 Identities=11% Similarity=0.096 Sum_probs=108.0
Q ss_pred eeeeeeccchhHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHH
Q 014600 25 SVLYYGSGHMLNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSF 104 (422)
Q Consensus 25 ~~~~y~~g~~~~~~~~~~~~~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~ 104 (422)
+.+.+....+..........++++.|++|.|.++.++|.++.+..+...+..++.|++.||+|+||. +.++.+...+.+
T Consensus 206 ~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~-l~~~~~~~~~~~ 284 (382)
T TIGR00902 206 MNLRFLAAVCLIQGAHAAYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDL-LLISAIACVGRW 284 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHH-HHHHHHHHHHHH
Confidence 3344555555556666677789999998889999999999999999999999999999999999877 567777777776
Q ss_pred HHhhcCccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHH-HHHHHHHHHHHHHH
Q 014600 105 SSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRN-AFTMVANLSLYAIA 183 (422)
Q Consensus 105 ~~lf~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~-~~~~ig~~l~~~~~ 183 (422)
.++-. .+ +.+ . ......+.++.++....+...++.+. + +++|++..+..+ ....+|..+++.++
T Consensus 285 ~~~~~-------~~--~~~-~---~~~~q~l~g~~~~~~~~~~~~~i~~~-~-~~~~~~~q~~~~~~~~g~g~~~g~~~~ 349 (382)
T TIGR00902 285 AIIGA-------IE--AFP-L---IFLLQILHCGTFAVCHLAAMRYIAAQ-P-GSEIAKLQALYNALAMGGLIAIFTAFA 349 (382)
T ss_pred HHHHh-------Hh--hHH-H---HHHHHHHHHHHHHHHHHHHHHHHHhC-C-HhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 54321 11 111 1 12234567888888887777778775 3 567788777754 45567888888887
Q ss_pred HHHHhh
Q 014600 184 FIVFSV 189 (422)
Q Consensus 184 ~~l~~~ 189 (422)
+.+.+.
T Consensus 350 G~l~~~ 355 (382)
T TIGR00902 350 GFIYPT 355 (382)
T ss_pred HHHHHh
Confidence 777664
No 167
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.49 E-value=2.7e-06 Score=78.82 Aligned_cols=125 Identities=13% Similarity=0.144 Sum_probs=96.5
Q ss_pred HHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCccchhh
Q 014600 47 LLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVE 125 (422)
Q Consensus 47 l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~~~~ 125 (422)
-+.|+++- |+|+..+|.+.+.--.+.++.+|+.|.++||.||+.-|..-+++....+=..++.. .++| +
T Consensus 287 g~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~Ft----~lsP----y-- 356 (459)
T KOG4686|consen 287 GPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFFT----FLSP----Y-- 356 (459)
T ss_pred hHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHhh----hccH----H--
Confidence 46777886 99999999999999999999999999999999999888877777766664444421 0111 1
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 014600 126 TISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVF 187 (422)
Q Consensus 126 ~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~ 187 (422)
... .+.++.|+...-.++.+++.+.+ +++-++..++.+...++|-.+.+++.+.+.
T Consensus 357 -~~m----~~lGLsysllAcslWP~va~~vp-E~qLGTaygf~qsIqNLgla~i~Iiag~i~ 412 (459)
T KOG4686|consen 357 -TSM----TFLGLSYSLLACSLWPCVASLVP-EEQLGTAYGFIQSIQNLGLAFIPIIAGFIA 412 (459)
T ss_pred -HHH----HHHhhhHHHHHHHHhhhhhhhCC-HHHhcchHHHHHHHHhhhhhHHhhhhheee
Confidence 112 35788899888889999999986 567788888888888988877776665444
No 168
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=98.48 E-value=8.6e-07 Score=86.58 Aligned_cols=168 Identities=13% Similarity=0.055 Sum_probs=104.5
Q ss_pred eeccchhHHHHHHHHHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcc-c-CCchhHHHHHHHHHHHHHH
Q 014600 29 YGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDR-F-GHFKIWHGAGSVLVAVSFS 105 (422)
Q Consensus 29 y~~g~~~~~~~~~~~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr-~-Grrrp~ll~g~i~~~i~~~ 105 (422)
-++.++..-+.-..+..+.|.|++|+ |.|...++...+..-+.......+.|++||| + |||.|--++..+...++..
T Consensus 257 la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~ 336 (448)
T COG2271 257 LALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLV 336 (448)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHH
Confidence 44444444455555678899999999 9999999999999999999999999999998 4 8999976777777777766
Q ss_pred HhhcCccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhh---hhhhhhccCCccchhhHHHHHHHHHHH-HHHHHHH
Q 014600 106 SVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAH---MSMVNCITLNSTSRVVLTSCRNAFTMV-ANLSLYA 181 (422)
Q Consensus 106 ~lf~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~---~al~~~~t~~~~eR~~l~~~~~~~~~i-g~~l~~~ 181 (422)
..|. .| +.+.....+ +++.+++ ++..|. .....|..+ .+--+.+.+++..++++ |...+..
T Consensus 337 ~~w~--~~-----~~~~~l~~~------~l~~iGf-~IyGPqmLiGl~a~e~~p-K~AaGtA~Gf~Glf~Yl~Ga~~a~~ 401 (448)
T COG2271 337 LYWL--AP-----NGSYLLDAI------LLFIIGF-LIYGPQMLIGLAAAEFVP-KKAAGTATGFVGLFAYLIGAALAGL 401 (448)
T ss_pred HHHc--CC-----CccHHHHHH------HHHHHHH-HHhhHHHHHHHHHhcccc-HhhccchhchhhhHHHHhhHHhcCC
Confidence 6553 22 222221111 1222222 223343 222344443 45567888898888888 5555443
Q ss_pred HHHHHHhhccCCCCCchHHHHHHHHHHHHHHHHHHHhhhh
Q 014600 182 IAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFL 221 (422)
Q Consensus 182 ~~~~l~~~~~~~g~~~~~~~~~~~~~i~~~i~~i~~~i~~ 221 (422)
.. .... | ..||...+++..+.++++.++..
T Consensus 402 ~~----g~i~-----d-~~gW~g~Fi~~~~~a~l~~lll~ 431 (448)
T COG2271 402 PL----GYIA-----D-TWGWDGGFIVLSIAALLAILLLL 431 (448)
T ss_pred cc----eeeE-----e-cCCCcchHHHHHHHHHHHHHHHH
Confidence 22 2221 1 14666666555554554444443
No 169
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.47 E-value=6.7e-06 Score=83.33 Aligned_cols=257 Identities=14% Similarity=0.112 Sum_probs=138.4
Q ss_pred HHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHH-HHhhcCccCccccCCccchhhhHHHHHHHHHHHHHHHHHHh
Q 014600 67 SGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSF-SSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQV 145 (422)
Q Consensus 67 i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~-~~lf~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 145 (422)
...+...+..|.+|.++||||||.+.. .......+.- .+++. .+ |.++..-..-++..+..
T Consensus 70 ~~~~~~~i~s~~iG~lSD~~grk~~L~-~~~~~~~l~~~~~~~~------------~~-----~~~~~~~l~g~~~~~~s 131 (463)
T KOG2816|consen 70 TAGLLTLISSPLIGALSDRYGRKVVLL-LPLFGTILPALCLLFQ------------GY-----WFFLLLGLSGGFSAIFS 131 (463)
T ss_pred hhHHHHHHHHhhhHHhhhhhhhhhhHH-HHHHHHHHhHHHHHHH------------HH-----HHhhhcccccchhhhhh
Confidence 446778889999999999999998854 3333333322 22221 01 11110112233445555
Q ss_pred hhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchHHHHHHHHHHHHHHHHHHHhhhhcccc
Q 014600 146 AHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTE 225 (422)
Q Consensus 146 p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~~~~~~~~~~~~i~~~i~~i~~~i~~~~~~ 225 (422)
...+.++|.++ .++|.+..+.-+.....+..+++.++.-+... .++...+.+..+..++......+.+|
T Consensus 132 ~~~a~vadis~-~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~----------~~~a~~f~ia~~~~~~~~~y~~~~l~ 200 (463)
T KOG2816|consen 132 VGFAYVADISS-EEERSSSIGLLSGTFGAGLVIGPALGGYLVKF----------LGIALVFLIAAASGILSLLYMLLFLP 200 (463)
T ss_pred hhhhheeeccc-hhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh----------cCchHHHHHHHHHHHHHHHHHhhccc
Confidence 56788889876 56888777776665555555655555444332 24555677777777777778888899
Q ss_pred CcccccccC---------C---CcchhhhHHHHHH---hHHHHHHHHHHHHHHHH-HHhhhHHHHHHhhhccCccchhHh
Q 014600 226 EPRLKMGLR---------G---NSHARISWAYWFK---KILYYQVALVYMLTRLV-VNVSQAYLAFYVINDLRMGQSAKA 289 (422)
Q Consensus 226 E~~~~~~~~---------~---~~~~~~~~~~~~~---n~~f~~~~~~~~~~~~~-~~~~~~y~~~y~~~~~~l~~~~~~ 289 (422)
|+..+++++ . +.+..+.++...+ .|..+.++...++.... .....-..+.|.....+++....+
T Consensus 201 Esl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s 280 (463)
T KOG2816|consen 201 ESLQEKERSDATLRELTPGSLDSSHVADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFS 280 (463)
T ss_pred cccCccccccccccccCCCcccchhhhhhhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHH
Confidence 975433221 0 0111222333332 22233333222222222 111121334455555566554321
Q ss_pred ----------------HHHHHHHH--------HHHH-------HHHHHH----------------HH---Hhhhhhhhhc
Q 014600 290 ----------------LVPAIIYI--------CSFI-------VSILLQ----------------VT---GISMQNVLVG 319 (422)
Q Consensus 290 ----------------~iP~~~~~--------~~~~-------~~~~~~----------------v~---~~~~~~~~~g 319 (422)
..|..... .|.. ...+.+ ++ ..++.+-..+
T Consensus 281 ~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~~~~~~~~~pa~~s~~s~~v~ 360 (463)
T KOG2816|consen 281 DLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATETWMMFAAGVVVALAGIVFPAIRAFASILVS 360 (463)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhccchhhhHHHHHHHhhcchhHHHHhHHHhhcc
Confidence 12221110 1110 000010 00 1233566678
Q ss_pred CccccccceehhhHHHHHHHHHHHHHHHHHhHhhC
Q 014600 320 EDLSGCAFVCGTLSFLDKMSCGIAVYVLQSYQSMS 354 (422)
Q Consensus 320 ~r~~g~~~~~s~~~~~~K~~~a~~~~i~g~~l~~~ 354 (422)
+++.|. .++..+.++.++..+++.+.+.+...+
T Consensus 361 ~~e~g~--v~~~is~i~~l~~~~~~~~~~~i~~~t 393 (463)
T KOG2816|consen 361 PEEQGK--VFGIISGIEGLSGVVSPALYGNIFALT 393 (463)
T ss_pred cccccc--hhhHHHHHHHHhhhhhHHHHHHHHHHH
Confidence 889999 999999999999999999999886654
No 170
>PRK12307 putative sialic acid transporter; Provisional
Probab=98.47 E-value=5.4e-06 Score=83.35 Aligned_cols=131 Identities=14% Similarity=0.084 Sum_probs=85.5
Q ss_pred HHHHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCccc
Q 014600 43 WFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTL 122 (422)
Q Consensus 43 ~~~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~ 122 (422)
...+++.|+++.|.++...+.+..+..+...+..++.|+++||+||||.+ ..+.+..++....++. .+ .. .
T Consensus 250 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~-~~~~~~~~~~~~~~~~--~~-----~~-~ 320 (426)
T PRK12307 250 IFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTF-SIGLLMSFLFIFPLFR--IP-----QD-N 320 (426)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH-HHHHHHHHHHHHHHHH--Hc-----cc-c
Confidence 45677888887799999999999999999999999999999999998874 4455554444333321 11 11 1
Q ss_pred hhhhHHHHHHHHHHHHHHH--HHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 014600 123 KVETISYCVFAAIFNVGWA--ATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFS 188 (422)
Q Consensus 123 ~~~~~~~~~~~~l~~~~~~--~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~ 188 (422)
... ... .+++.++. .......++..|..+ ++.|++..++-.....+|+.+++.+.+.+.+
T Consensus 321 ~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~ 382 (426)
T PRK12307 321 YLL-LGA----CLFGLMATNVGVGGLVPKFLYDYFP-LEVRGLGTGLIYNLAATSGTFNSMAATWLGI 382 (426)
T ss_pred HHH-HHH----HHHHHHHhcccHhHHHHHHHHHhCc-HHHHhhhhhHHHHHHhHHHHHHHHHHHHHHH
Confidence 111 111 12222221 122234456678776 5789999998877888888887776655543
No 171
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.46 E-value=8.9e-06 Score=81.33 Aligned_cols=193 Identities=13% Similarity=0.101 Sum_probs=136.2
Q ss_pred CCceeeeeeeccchhHHHHHHHHHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHH
Q 014600 21 VGRWSVLYYGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVL 99 (422)
Q Consensus 21 l~~~~~~~y~~g~~~~~~~~~~~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~ 99 (422)
++.++.+.+-...+..+.......+|...|++|. |.+....|.+++++.+.....--..+++..|+|-|+. +.++.+.
T Consensus 204 lk~~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~l-l~~a~~~ 282 (400)
T PF03825_consen 204 LKNPRFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWL-LLLALVA 282 (400)
T ss_pred hcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHH-HHHHHHH
Confidence 3455666777777778888888889999999999 5889999999999999999888899999999998877 5567666
Q ss_pred HHHHHHHhhcCccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHH-HHHHHHH
Q 014600 100 VAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAF-TMVANLS 178 (422)
Q Consensus 100 ~~i~~~~lf~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~-~~ig~~l 178 (422)
.++=+.+... .++ +.+.....-++-..+.++.|+++.+....++.+..+ ++.|.+..++.... .++|..+
T Consensus 283 ~~vR~~l~a~-------~~~-~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p-~~~~at~Q~l~~~~~~Glg~~i 353 (400)
T PF03825_consen 283 YAVRWLLYAY-------FSD-PWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAP-PELRATAQGLYSALSFGLGGAI 353 (400)
T ss_pred HHHHHHHHHH-------hcC-CcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCC-ccchHHHHHHHHHHHhhHHHHH
Confidence 6665544321 101 111111111111235788899888888888998886 67899999976654 5789999
Q ss_pred HHHHHHHHHhhccCCCCCchHHHHHHHHHHHHHHHHHHHhhhhccccCc
Q 014600 179 LYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEP 227 (422)
Q Consensus 179 ~~~~~~~l~~~~~~~g~~~~~~~~~~~~~i~~~i~~i~~~i~~~~~~E~ 227 (422)
++.+++.+.+..+. +....|.....+.+.+.++..++.++.-||+
T Consensus 354 G~~igG~l~~~~g~----~~~~~~~~~~~v~a~~~~~~~~~f~~~fk~~ 398 (400)
T PF03825_consen 354 GSLIGGWLYDAFGA----RGMFDWSAVFLVFAVMALVILVLFVILFKPK 398 (400)
T ss_pred HHHHHHHHHHHhcc----hhhhhHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 99999988886541 2223344455566666666666666666775
No 172
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.45 E-value=6.1e-06 Score=82.42 Aligned_cols=142 Identities=17% Similarity=0.063 Sum_probs=100.8
Q ss_pred chhHHHHHHHHHHHHHHHHHHh-C----CChhHHHHHHHHHHHHhhhhhhhhhhhhcc-cCCchhHHHHHHHHHHHHHHH
Q 014600 33 HMLNDITAACWFTYLLLFLTDI-G----LSPRGAAAVMLSGQIADGFATIFIGELIDR-FGHFKIWHGAGSVLVAVSFSS 106 (422)
Q Consensus 33 ~~~~~~~~~~~~~~l~~f~t~~-g----ls~~~~g~i~~i~~l~~ai~~p~~G~lsDr-~Grrrp~ll~g~i~~~i~~~~ 106 (422)
++--.+.++....-+..|++.. + ++.+++.-++..+.-+-=.+..+.||++|| +|+||. +..|+++.+++-+.
T Consensus 30 E~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~t-I~lGail~~iGh~~ 108 (498)
T COG3104 30 ELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRT-IVLGAILMAIGHLV 108 (498)
T ss_pred HHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHH-HHHHHHHHHHHHHH
Confidence 3445555666666677776654 6 999998888888888777888899999999 999999 66899999999888
Q ss_pred hhcCccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCC-ccchhhHHHHHHHHHHHHHHHHHHHHHH
Q 014600 107 VFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLN-STSRVVLTSCRNAFTMVANLSLYAIAFI 185 (422)
Q Consensus 107 lf~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~-~~eR~~l~~~~~~~~~ig~~l~~~~~~~ 185 (422)
+.. + +..+.. ..|+- ..+..++++.+=....+++.|+-++ +.+|....+...+..++|+++.+.+.+.
T Consensus 109 L~~---~----~~~~~~---gl~i~-L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~ 177 (498)
T COG3104 109 LAI---S----SVSGPG---GLYIG-LALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGL 177 (498)
T ss_pred Hhc---c----cccccc---HHHHH-HHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHH
Confidence 774 2 101121 12221 1234477777777778888888653 3447778888888889998887766543
Q ss_pred H
Q 014600 186 V 186 (422)
Q Consensus 186 l 186 (422)
+
T Consensus 178 ~ 178 (498)
T COG3104 178 L 178 (498)
T ss_pred H
Confidence 3
No 173
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=98.44 E-value=7.6e-06 Score=81.29 Aligned_cols=141 Identities=11% Similarity=0.101 Sum_probs=96.2
Q ss_pred chhHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCcc
Q 014600 33 HMLNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCM 112 (422)
Q Consensus 33 ~~~~~~~~~~~~~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~ 112 (422)
.+..+.......++++.|.+|.|.+...+|.++.+..+...+..++.|++.||+|+||. +..+.+..++.+.++..
T Consensus 214 ~~l~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~-l~~~~~~~~~~~~~~~~--- 289 (382)
T PRK11128 214 VSLLQGSHAAYYGFSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDL-LLLSAICGVVRWGLMGS--- 289 (382)
T ss_pred HHHHHHHhHhHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH-HHHHHHHHHHHHHHHHh---
Confidence 33334444455678888887779999999999999999999999999999999999888 55677777766544331
Q ss_pred CccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHH-HHHHHHHHHHHHHHHHHHhh
Q 014600 113 PCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRN-AFTMVANLSLYAIAFIVFSV 189 (422)
Q Consensus 113 p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~-~~~~ig~~l~~~~~~~l~~~ 189 (422)
.+ +.+ . ..+..++++++++....+...+..+. +++++++..+..+ ....+|..+++.+++.+.+.
T Consensus 290 ----~~--~~~-~---~~~~~~l~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~ 355 (382)
T PRK11128 290 ----TT--ALP-W---LIVIQILHCGTFTVCHLAAMRYIAAR--PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQH 355 (382)
T ss_pred ----hh--hHH-H---HHHHHHHHHHHHHHHHHHHHHHHHHC--CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 11 112 1 12223467788887777777777664 3556677777654 33455666777777666654
No 174
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.44 E-value=4.3e-06 Score=86.68 Aligned_cols=145 Identities=16% Similarity=0.108 Sum_probs=102.3
Q ss_pred hCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCccchhhhHHHHHHH
Q 014600 54 IGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFA 133 (422)
Q Consensus 54 ~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~~~~~~~~~~~~ 133 (422)
+..+.....+..++..+...++..+.|.++||+|||+.++ .+.....++-.+.- ++++ +..+++++
T Consensus 113 ~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~-~~~~~~~i~~~~~a-------~a~~------~~~~~~~R 178 (521)
T KOG0255|consen 113 VCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLL-VSLLLFIIFGILTA-------FAPN------YWMFLIFR 178 (521)
T ss_pred eeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHH-HHHHHHHHHHHHHH-------HhCc------HHHHHHHH
Confidence 3778888888889999999999999999999999988854 55555555432211 1222 23455566
Q ss_pred HHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchHHHHHHHHHHHHHHH
Q 014600 134 AIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIG 213 (422)
Q Consensus 134 ~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~~~~~~~~~~~~i~~~i~ 213 (422)
.+.+++.+........+..|+.. +++|+...++ ......++.+++... ..+ ..+|||..++..++.
T Consensus 179 fl~G~~~~~~~~~~~~~~~E~~~-~~~R~~~~~~-~~~~~~~~~~~~~~~----a~~--------~~~Wr~~~~~~~~~~ 244 (521)
T KOG0255|consen 179 FLSGFFGSGPLTVGFGLVAEIVS-PKQRGLALTL-GGFFFVGGLMLPAGA----AYI--------TRDWRWLFWIISIPS 244 (521)
T ss_pred HHHHhhccchhHHhHhhheeecC-cchhhHHHHH-HHHHHHHHHHHHHHH----HHH--------HhhHHHHHHHHHHHH
Confidence 77888888888888889999986 7899999988 555555555544332 322 138999998887777
Q ss_pred HHHHhhhhccccCc
Q 014600 214 CCFVGIFLSRTEEP 227 (422)
Q Consensus 214 ~i~~~i~~~~~~E~ 227 (422)
.+..++ ++..+|.
T Consensus 245 ~~~~~~-~~l~~Es 257 (521)
T KOG0255|consen 245 GLFLLL-WFLPPES 257 (521)
T ss_pred HHHHHH-HHccCcC
Confidence 766555 5555564
No 175
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.43 E-value=4.7e-05 Score=75.27 Aligned_cols=163 Identities=16% Similarity=0.161 Sum_probs=93.2
Q ss_pred CChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCccchhhhHHHHHHHHH
Q 014600 56 LSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAI 135 (422)
Q Consensus 56 ls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~~~~~~~~~~~~~l 135 (422)
.+....+.+..++.+-..+.+.+.|++.||+||||.+.. ..+++.++.++.- .|..-.+..+ ...+....+.+
T Consensus 81 ~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~-~liImIi~t~~~~---~s~~~~~~~~---~m~~L~~~R~~ 153 (538)
T KOG0252|consen 81 YPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGK-ELIIMIICSALSG---LSVGTTSPLG---VMMTLCFFRFL 153 (538)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhH-HHHHHHHHHHHhc---cCCCCCCCcc---hhhHHHHHHHH
Confidence 788899999999999999999999999999999999764 4555555554332 2311111111 11222223345
Q ss_pred HHHHHHHHHhhhhhh-hhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCC-----chHHHHHHHHHHH
Q 014600 136 FNVGWAATQVAHMSM-VNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHA-----DLENQYRWIAYSS 209 (422)
Q Consensus 136 ~~~~~~~~~~p~~al-~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~-----~~~~~~~~~~~i~ 209 (422)
.+++-+.= -|..|. .+|. .+.+.|+...+.-..+.+.|.+.+.+++..+...+....++ .-+.-||..+.+-
T Consensus 154 LGiGIGGD-YPlSAtI~SE~-an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg 231 (538)
T KOG0252|consen 154 LGIGIGGD-YPLSATIMSES-ANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLG 231 (538)
T ss_pred hhccccCC-CcchHHHhhhh-hhhccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHH
Confidence 66665543 344444 4454 45778887666555555555555554444333322211001 1123488877665
Q ss_pred HHHHHHHHhhhhccccCcc
Q 014600 210 IFIGCCFVGIFLSRTEEPR 228 (422)
Q Consensus 210 ~~i~~i~~~i~~~~~~E~~ 228 (422)
++.++.+ +..-...||++
T Consensus 232 ~vpa~~~-ly~Rl~M~Et~ 249 (538)
T KOG0252|consen 232 AVPALLV-LYFRLKMPETA 249 (538)
T ss_pred HHHHHHH-HHhhhcCCcch
Confidence 5555543 34445567753
No 176
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=98.43 E-value=1.6e-06 Score=87.17 Aligned_cols=141 Identities=11% Similarity=-0.006 Sum_probs=86.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHh--CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCc
Q 014600 34 MLNDITAACWFTYLLLFLTDI--GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGC 111 (422)
Q Consensus 34 ~~~~~~~~~~~~~l~~f~t~~--gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~ 111 (422)
+.....+....+|+|.|+++. |.+...++.......+...+..++.|+++||+||||..+....+...+++.+..
T Consensus 252 ~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~~~~~--- 328 (412)
T TIGR02332 252 FCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGWLLAS--- 328 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHHHHHH---
Confidence 334444555678999999985 788999999999999999999999999999999888654444444444332211
Q ss_pred cCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 014600 112 MPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFS 188 (422)
Q Consensus 112 ~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~ 188 (422)
+ .+ +.. . .+..+ .+...+.......+.....|. .++++|++..++.+....+|+.+++.+.+.+.+
T Consensus 329 -~---~~--~~~-~--~~~~~-~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~ 394 (412)
T TIGR02332 329 -A---TD--HNL-I--QLLGI-IMASMGSFSAMAIFWTTPDQS-ISLQARAIAIAVINATGNIGSALSPFLIGILKD 394 (412)
T ss_pred -h---cC--CHH-H--HHHHH-HHHHHHhhhhhhHHHhhcccc-cchHHHHHHHHHHHHhhhhhhhhhhhhcccccc
Confidence 1 11 111 1 11100 112222211112222333343 346789999999998888888887765544443
No 177
>TIGR00895 2A0115 benzoate transport.
Probab=98.43 E-value=2.6e-06 Score=84.13 Aligned_cols=133 Identities=16% Similarity=0.016 Sum_probs=90.8
Q ss_pred HHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccc
Q 014600 37 DITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRI 116 (422)
Q Consensus 37 ~~~~~~~~~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~ 116 (422)
.........+++++..+.|.++.+.+.+..+..+...+..++.|+++||+||| +.+.. ....++...+++..
T Consensus 263 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~-~~~~~~~~~~~~~~------ 334 (398)
T TIGR00895 263 LVGVYFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPR-VTALL-LLLGAVFAVLVGST------ 334 (398)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchH-HHHHH-HHHHHHHHHHHHHH------
Confidence 33444455667744444599999999999999999999999999999999988 43433 33333333222210
Q ss_pred cCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHH
Q 014600 117 LSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAF 184 (422)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~ 184 (422)
. .+.... ....++.+++++.......++..+..+ +++|++..++......+|..+++.+.+
T Consensus 335 ~--~~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~~g~~~g~~~~G 395 (398)
T TIGR00895 335 L--FSPTLL----LLLGAIAGFFVNGGQSGLYALMALFYP-TAIRATGVGWAIGIGRLGAIIGPILAG 395 (398)
T ss_pred h--hCHHHH----HHHHHHHHHHHHHHHHHHHHHHhhcCC-HHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 0 111111 122245777888888888899999876 678999999888888888877765543
No 178
>PRK10054 putative transporter; Provisional
Probab=98.38 E-value=9e-06 Score=81.28 Aligned_cols=180 Identities=8% Similarity=0.067 Sum_probs=108.9
Q ss_pred eeeeeeeccchhHHHHHHHHHHHHHHHHHHh---CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHH
Q 014600 24 WSVLYYGSGHMLNDITAACWFTYLLLFLTDI---GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLV 100 (422)
Q Consensus 24 ~~~~~y~~g~~~~~~~~~~~~~~l~~f~t~~---gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~ 100 (422)
++.+.+....+...........+++.|..+. +.+...+|.++.+..+......+..|++.||+|+|+. +..+....
T Consensus 206 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-l~~~~~~~ 284 (395)
T PRK10054 206 KALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPL-MTAGTLCF 284 (395)
T ss_pred ceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhH-HHHHHHHH
Confidence 3334444444444444444445566666543 6778888999999988888889999999999998876 55666666
Q ss_pred HHHHHHhhcCccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHH
Q 014600 101 AVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLY 180 (422)
Q Consensus 101 ~i~~~~lf~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~ 180 (422)
+++...+.. . .. ..+. +.+...++++++........+++.+..+ ++.|++..+..+ ...+|..+++
T Consensus 285 ~~~~~~~~~-------~-~~-~~~~---~~~~~~~~~~g~~~~~p~~~~~~~~~~p-~~~~~~~~~~~~-~~~~G~~~Gp 350 (395)
T PRK10054 285 VIGLVGFIF-------S-GN-SLLL---WGMSAAVFTVGEIIYAPGEYMLIDHIAP-PGMKASYFSAQS-LGWLGAAINP 350 (395)
T ss_pred HHHHHHHHH-------c-ch-HHHH---HHHHHHHHHHHHHHHHhhHHHHHHHhCC-cccceehHhHHH-HHHHHHHHHH
Confidence 665543221 0 01 1111 1122235667766655566677778775 467777766543 4556777877
Q ss_pred HHHHHHHhhccCCCCCchHHHHHHHHHHHHHHHHHHHhhhhccccCcc
Q 014600 181 AIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPR 228 (422)
Q Consensus 181 ~~~~~l~~~~~~~g~~~~~~~~~~~~~i~~~i~~i~~~i~~~~~~E~~ 228 (422)
.+++.+.+.. ++...+.+.+....+..++.....+|||
T Consensus 351 ~~~G~l~~~~----------g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (395)
T PRK10054 351 LVSGVILTTL----------PPWSLFVILALAIVAAWLLMLKGMRARP 388 (395)
T ss_pred HHHHHHHHHc----------ChhhHHHHHHHHHHHHHHHHHhccccCc
Confidence 7777776643 3444445554445554455556667765
No 179
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.38 E-value=1.2e-06 Score=66.02 Aligned_cols=58 Identities=26% Similarity=0.437 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHH
Q 014600 39 TAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAG 96 (422)
Q Consensus 39 ~~~~~~~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g 96 (422)
..+...+|++.|+.+.|+++.++|.+..+..+...+..|++|.++||+||+|..+..+
T Consensus 15 ~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~ 72 (77)
T PF12832_consen 15 ALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGS 72 (77)
T ss_pred HHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHH
Confidence 3455678999999999999999999999999999999999999999999999866543
No 180
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.36 E-value=6.5e-06 Score=82.12 Aligned_cols=165 Identities=10% Similarity=-0.024 Sum_probs=98.4
Q ss_pred chhHHHHHHHHHHHHHHHHHHh----CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhh
Q 014600 33 HMLNDITAACWFTYLLLFLTDI----GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVF 108 (422)
Q Consensus 33 ~~~~~~~~~~~~~~l~~f~t~~----gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf 108 (422)
.+.....+.....+++.|+++. +.+....|.+..+..+...+..+..|++.||+||||. +..+..+.++.+.+..
T Consensus 224 ~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~-l~~~~~l~~l~~~~~~ 302 (396)
T TIGR00882 224 VVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNA-LLIAGTIMSVRIIGSS 302 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchh-HHHHHHHHHHHHHHHH
Confidence 3333344444445667777764 4566788999999999999999999999999999887 5566666666554422
Q ss_pred cCccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHH-HHHHHHHHHHHHHHHHHHHH
Q 014600 109 GGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSC-RNAFTMVANLSLYAIAFIVF 187 (422)
Q Consensus 109 ~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~-~~~~~~ig~~l~~~~~~~l~ 187 (422)
. .+ +.++. .+...+.++++............+..+ ++.|+...+. .+....+|+.+++.+.+.+.
T Consensus 303 ~-------~~--~~~~~----~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~ 368 (396)
T TIGR00882 303 F-------AT--TALEV----VILKMLHAFEVPFLLVGCFKYITSQFD-VRLSATIYLIGFQFAKQLAMIFLSTLAGNMY 368 (396)
T ss_pred h-------cC--ChHHH----HHHHHHHHHHHHHHHHHHHHHHHHhCC-cceEEEeehHHHHHHHHHHHHHHHHhHHHHH
Confidence 1 11 12211 112234556655544434444444433 3334443333 34566777777777776666
Q ss_pred hhccCCCCCchHHHHHHHHHHHHHHHHHHHhhhhc
Q 014600 188 SVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLS 222 (422)
Q Consensus 188 ~~~~~~g~~~~~~~~~~~~~i~~~i~~i~~~i~~~ 222 (422)
+. .||+..+.+.+++.++..++..+
T Consensus 369 ~~----------~G~~~~f~~~~~~~~i~~~~~~~ 393 (396)
T TIGR00882 369 DS----------IGFQGAYLVLGCIVLLFTLISVF 393 (396)
T ss_pred Hh----------cccHHHHHHHHHHHHHHHHHHHH
Confidence 53 25666666666666665555443
No 181
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.35 E-value=7e-06 Score=93.10 Aligned_cols=132 Identities=14% Similarity=0.149 Sum_probs=95.8
Q ss_pred HHHHHHHHHHHHHHHHh-CCChh-HHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCcc
Q 014600 38 ITAACWFTYLLLFLTDI-GLSPR-GAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCR 115 (422)
Q Consensus 38 ~~~~~~~~~l~~f~t~~-gls~~-~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~ 115 (422)
........+++.|+.+. |++.. ..|++.+...+...+..++.|+++||+++|+. +.++.+..+++..++..
T Consensus 246 ~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~-~~~~~~~~~~~~~~~~~------ 318 (1146)
T PRK08633 246 FISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGL-VPLGALGLALSLFLLPT------ 318 (1146)
T ss_pred HHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccc-hhHHHHHHHHHHHHHHH------
Confidence 33344556788888887 99999 99999999999999999999999999998876 44555666555444331
Q ss_pred ccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHH
Q 014600 116 ILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAF 184 (422)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~ 184 (422)
.+ +.+ ..++..++++++.++..++..+++.+.++ +++|++..+..+....+|.+++..++.
T Consensus 319 -~~--~~~----~~~~~~~~~g~~~~~~~~~~~~~~~~~~p-~~~rg~~~~~~~~~~~lg~~~~~~~~~ 379 (1146)
T PRK08633 319 -AP--SLA----SVLVLFFLFGFSAGLFIVPLNALIQFRAP-EKELGKVLAANNFLQNVGMLLFLALTT 379 (1146)
T ss_pred -hh--hHH----HHHHHHHHHHHHHHHhhHHHHHHHhhcCC-ccchhhhhHHHHHHHHHHHHHHHHHHH
Confidence 11 111 11222245777888888888899988876 678999999988888888766655543
No 182
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.33 E-value=3.1e-06 Score=82.16 Aligned_cols=138 Identities=16% Similarity=0.171 Sum_probs=97.5
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHh-CCC-hhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhh
Q 014600 31 SGHMLNDITAACWFTYLLLFLTDI-GLS-PRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVF 108 (422)
Q Consensus 31 ~g~~~~~~~~~~~~~~l~~f~t~~-gls-~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf 108 (422)
...+...........+++.|..+. |.+ ..+.+.+..+..+...+..++.|+++||+|+|+.... ......+....+.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~ 291 (352)
T PF07690_consen 213 IAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLI-AILLLILGALGLL 291 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH-HHHHHHHHHHHHC
T ss_pred hhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHH-HHHHHHHHHHHHH
Confidence 333444445555677888886666 999 8999999999999999999999999999999877544 4444444443333
Q ss_pred cCccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHH
Q 014600 109 GGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLY 180 (422)
Q Consensus 109 ~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~ 180 (422)
. .+ ...+..+. ....++.+++++.......++..+..+ +++|++..+..+...++|..+++
T Consensus 292 ~--~~----~~~~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 292 L--LP----FSSSPVWL----IIALFLIGFGFGIVFPILFSLIQELVP-PEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp C--SH----HHCHHHHH----HHHHHHHHHHHHHHCHHHHHHHHCCCH-TCHHHHHHHHHHHHHHHHHHHHH
T ss_pred H--HH----HhhhHHHH----HHHHHHHHHHHHHHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHCC
Confidence 2 11 01111211 112345778888888889999999875 68999999999988888887653
No 183
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.33 E-value=2.3e-05 Score=80.08 Aligned_cols=159 Identities=14% Similarity=0.131 Sum_probs=108.8
Q ss_pred eeeeeeeccchhHHHHHHHHHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCc--hhHHHHHHHHH
Q 014600 24 WSVLYYGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHF--KIWHGAGSVLV 100 (422)
Q Consensus 24 ~~~~~y~~g~~~~~~~~~~~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grr--rp~ll~g~i~~ 100 (422)
++...|-++.+..+-..+.+.++...|.+++ |++..+...+..+..+...+...+.|++.||+|.| |. ++.+....
T Consensus 281 ~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~-l~~~l~~~ 359 (477)
T PF11700_consen 281 RQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRT-LLISLILW 359 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHH-HHHHHHHH
Confidence 3445565565544444555667888999987 99999999999999999999999999999999977 55 43433333
Q ss_pred -HHHHHHhhcCccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHH
Q 014600 101 -AVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSL 179 (422)
Q Consensus 101 -~i~~~~lf~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~ 179 (422)
.+....++- ..|... ..+..+. .| ++.++.++..+..+....++.+++.|+ ++.+...+.....+-..+.++
T Consensus 360 ~~i~~~g~~G-~~~~~~--g~~~~~~--f~-~~a~~~G~~~G~~qs~sRs~~~~LiP~-g~e~efFgly~i~gk~ss~lG 432 (477)
T PF11700_consen 360 IIIPLYGLFG-FWPSFF--GLKSPWE--FW-VLAVLIGLFMGGIQSASRSLFSRLIPP-GREAEFFGLYAITGKASSWLG 432 (477)
T ss_pred HHHHHHHHHH-hhhccc--CcccHHH--HH-HHHHHHHHHhhhHHHHHHHHHHHhCCC-chhhHHHHHHHHHHHHHHHHH
Confidence 223222220 011000 0112222 22 234568888888999999999999984 556888998888888888888
Q ss_pred HHHHHHHHhhc
Q 014600 180 YAIAFIVFSVS 190 (422)
Q Consensus 180 ~~~~~~l~~~~ 190 (422)
+.+.+.+.+..
T Consensus 433 Pll~g~i~~~t 443 (477)
T PF11700_consen 433 PLLFGLITDAT 443 (477)
T ss_pred HHHHHHHHHHh
Confidence 87776666543
No 184
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.31 E-value=2.1e-05 Score=75.54 Aligned_cols=183 Identities=12% Similarity=0.043 Sum_probs=124.3
Q ss_pred ceeeeeeeccch--hHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHH
Q 014600 23 RWSVLYYGSGHM--LNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLV 100 (422)
Q Consensus 23 ~~~~~~y~~g~~--~~~~~~~~~~~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~ 100 (422)
++++.++-+.-+ .++..++....++|.++.|.|+|+.+.|.+.++..+........+-.+.+|...+||+.+.....+
T Consensus 205 w~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~ 284 (395)
T COG2807 205 WRSPLAWQVTLFMGLQSLLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLM 284 (395)
T ss_pred ccCchhHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHH
Confidence 445555555532 245666777789999999999999999999999999999999999999999888899887777777
Q ss_pred HHHHHHhhcCccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHH
Q 014600 101 AVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLY 180 (422)
Q Consensus 101 ~i~~~~lf~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~ 180 (422)
.+++..+.+ .| .... +.+. ++++++.+....-...++.+.++|+++-.+++++.+..+++=...++
T Consensus 285 l~G~~G~~~--~P-----~~~~----~lw~---~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP 350 (395)
T COG2807 285 LVGLVGLLL--AP-----GQLP----ILWA---LLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGP 350 (395)
T ss_pred HHHHHHHHH--hh-----hhHH----HHHH---HHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhh
Confidence 777665432 13 2111 1221 25666666555556778888899999999999987666555444444
Q ss_pred HHHHHHHhhccCCCCCchHHHHHHHHHHHHHHHHHHHhhhhccccCcc
Q 014600 181 AIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPR 228 (422)
Q Consensus 181 ~~~~~l~~~~~~~g~~~~~~~~~~~~~i~~~i~~i~~~i~~~~~~E~~ 228 (422)
.+.+.+-+. ..+|+..........++..+..+..-|++.
T Consensus 351 ~l~G~lhDa---------~gsw~~~~~~l~~~~i~m~i~Gl~a~r~~~ 389 (395)
T COG2807 351 WLFGFLHDA---------TGSWSAPLVLLALATLLMLIFGLRAGRNRY 389 (395)
T ss_pred hhHhHHHHh---------cCChHHHHHHHHHHHHHHHHHHhhcchhHH
Confidence 333333222 235666655555555555555555555543
No 185
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.30 E-value=1.5e-05 Score=79.03 Aligned_cols=144 Identities=13% Similarity=0.048 Sum_probs=84.5
Q ss_pred eeeeeccchhHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhccc---CCchhHHHHHHHHHHH
Q 014600 26 VLYYGSGHMLNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRF---GHFKIWHGAGSVLVAV 102 (422)
Q Consensus 26 ~~~y~~g~~~~~~~~~~~~~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~---Grrrp~ll~g~i~~~i 102 (422)
.+......+.....+....+|+|.|+++.|.+.. .+....+..+...+. .|+++||. |||+.+........++
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~wlp~~L~~~g~s~~-~~~~~~l~~~~g~~g---~~~~~d~~~r~~~r~~~~~~~~~~~a~ 269 (368)
T TIGR00903 194 LWIIGAILGFGVALFDNLAIWLEAALRPAGLEDI-AGDAVALAILAGLIG---VAVIPDRVARAGLRSIYIRAAALLIAA 269 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCChH-HHHHHHHHHHHHHHH---HHHhhHHhhhhhhHHHHHHHHHHHHHH
Confidence 3444445555566666677899999987788765 666666666666655 46777765 4445444333333333
Q ss_pred HHHHhhcCccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHH
Q 014600 103 SFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAI 182 (422)
Q Consensus 103 ~~~~lf~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~ 182 (422)
...++.. .. +.... +.. ..+.+.+.........++.+|..+ ++.|++..++.+..+.+|++.++.+
T Consensus 270 ~~~~~~~-------~~--~~~~~-~~~---~~l~~~~~~~~~~~~~~~~~~~~p-~~~rgt~~G~~~~~g~~~~~~~~~~ 335 (368)
T TIGR00903 270 FFLALAF-------EL--NRLAL-FAF---IGIAGLLMLPAYAIIMDWIGKFCD-KELHGKAAGAIGFTSRAISVALALA 335 (368)
T ss_pred HHHHHHH-------cc--ccHHH-HHH---HHHHHHhhhhhHHHHHHHHHHhcc-hhhcCcccchhhHHHHHHHHHHHHH
Confidence 3222111 11 11111 111 112333333333446788899886 6799999999999999998887766
Q ss_pred HHHHH
Q 014600 183 AFIVF 187 (422)
Q Consensus 183 ~~~l~ 187 (422)
.+.++
T Consensus 336 ~~~~~ 340 (368)
T TIGR00903 336 AMLFI 340 (368)
T ss_pred HHHHh
Confidence 55444
No 186
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.29 E-value=5.7e-06 Score=83.68 Aligned_cols=166 Identities=16% Similarity=0.081 Sum_probs=113.8
Q ss_pred HHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCccchh
Q 014600 45 TYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKV 124 (422)
Q Consensus 45 ~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~~~ 124 (422)
.|-..++.+.|++...+-.+.....++..+...+...+.||.||| |.++.+...+.+...++.. ........+.
T Consensus 291 ~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRR-pLll~~~~~~~~~~~~~~~---~~~l~~~~~~-- 364 (485)
T KOG0569|consen 291 FYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRR-PLLLISLSLMAVALLLMSI---ALFLSNSFGS-- 364 (485)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-HHHHHHHHHHHHHHHHHHH---HHHHHHHhhh--
Confidence 455555666699999999999999999999999999999999976 4466777777666544432 1001111111
Q ss_pred hhHHHH-HHH-HHHHHHHHHHHhh-hhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchHHH
Q 014600 125 ETISYC-VFA-AIFNVGWAATQVA-HMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQ 201 (422)
Q Consensus 125 ~~~~~~-~~~-~l~~~~~~~~~~p-~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~~~~~~ 201 (422)
...|. ++. +++...++.-..| -+-+.+|+.+ ++.|..+.++......+.+++.....+|+-+.++ +
T Consensus 365 -~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~-~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g---------~ 433 (485)
T KOG0569|consen 365 -WLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFP-QSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIG---------P 433 (485)
T ss_pred -HHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCC-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---------c
Confidence 12232 222 3455556543222 2456889886 7899999999999999999888877777665543 1
Q ss_pred HHHHHHHHHHHHHHHHhhhhccccCccc
Q 014600 202 YRWIAYSSIFIGCCFVGIFLSRTEEPRL 229 (422)
Q Consensus 202 ~~~~~~i~~~i~~i~~~i~~~~~~E~~~ 229 (422)
..++.+.+.++++.+..++.+||.+.
T Consensus 434 --~~filF~i~~~~~~i~~~~~lPETkg 459 (485)
T KOG0569|consen 434 --YVFILFVIPLAIFLIYLYRYLPETKG 459 (485)
T ss_pred --hhhHHHHHHHHHHHHHHHHhCcccCC
Confidence 35666777788888888999999763
No 187
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.26 E-value=2.8e-05 Score=76.60 Aligned_cols=124 Identities=16% Similarity=0.096 Sum_probs=79.3
Q ss_pred HHHHHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccC
Q 014600 40 AACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILS 118 (422)
Q Consensus 40 ~~~~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~ 118 (422)
......+.+.++++. |.++.++|.+.....+...+..++.|+++||+||||.. ..+.....++..++.. .+ ..
T Consensus 222 ~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~---~~ 295 (385)
T TIGR00710 222 FFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLL-RMGLILFAVSAVLLEI--TA---IL 295 (385)
T ss_pred HHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHH-HHHHHHHHHHHHHHHH--HH---Hh
Confidence 334455678888876 99999999999999999999999999999999998874 4555555555444331 01 00
Q ss_pred CccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHH
Q 014600 119 TSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMV 174 (422)
Q Consensus 119 ~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~i 174 (422)
..... . .......+.+.+.+.......+...|.. +++|++..+..+.....
T Consensus 296 ~~~~~-~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~g~~~~~~~~~~~~ 346 (385)
T TIGR00710 296 GLGSW-A--MIIGPMMFVGIGNSMISSIAMAYALEDF--PHVAGTASALFGTLRLV 346 (385)
T ss_pred ccchH-H--HHHHHHHHHHHHHHHHHHHHHHHHhccC--cccchHHHHHHHHHHHH
Confidence 00111 1 1111123455666655555555555543 46788888877665544
No 188
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.25 E-value=1.1e-05 Score=80.66 Aligned_cols=131 Identities=15% Similarity=0.107 Sum_probs=87.6
Q ss_pred HHHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhc-ccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCccc
Q 014600 44 FTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELID-RFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTL 122 (422)
Q Consensus 44 ~~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsD-r~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~ 122 (422)
..++|.|.++.+.++..+|.+.++..+.........+++.| |++.+|. +..+.+..+++..++.. .++ .
T Consensus 228 ~~~~p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~~~~~~~~~l~~-------~~~--~ 297 (400)
T PRK11646 228 MLMLPIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHR-LMAGLLIMSLSMFPIGM-------VSN--L 297 (400)
T ss_pred HHhhhhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHH-HHHHHHHHHHHHHHHHH-------hhh--H
Confidence 45678888887447788898888877766655555567776 4655554 44566666666543321 111 1
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 014600 123 KVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSV 189 (422)
Q Consensus 123 ~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~ 189 (422)
. . ..+...+++.+......+..++..+..+ +++|++..+..+....+|..+++.+.+.+.+.
T Consensus 298 ~-~---~~~~~~l~~~g~~~~~p~~~~~~~~~~p-~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~ 359 (400)
T PRK11646 298 Q-Q---LFTLICLFYIGSIIAEPARETLSASLAD-ARARGSYMGFSRLGLALGGAIGYIGGGWLFDL 359 (400)
T ss_pred H-H---HHHHHHHHHHHHHHHHccHHHHHHhcCC-cccchhhhhHHHHHHHHHHHhcccchHHHHHH
Confidence 1 1 1111234666666777777888888875 68999999999998899999988888777764
No 189
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.24 E-value=3.8e-05 Score=76.70 Aligned_cols=130 Identities=21% Similarity=0.142 Sum_probs=84.2
Q ss_pred HHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHH-HHHhhcCccCccccCCc
Q 014600 43 WFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVS-FSSVFGGCMPCRILSTS 120 (422)
Q Consensus 43 ~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~-~~~lf~~~~p~~~~~~~ 120 (422)
..+++++++.+. |+++..+|.++....+...+..++.|++.||.+ |+..+. +.....+. ..+... . .
T Consensus 235 ~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~-~~~l~~-~~~~~~~~~~~l~~~-------~--~ 303 (394)
T PRK10213 235 FFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSV-KLALAG-APLVLAVSALVLTLW-------G--S 303 (394)
T ss_pred HHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccc-hhHHHH-HHHHHHHHHHHHHHH-------h--h
Confidence 345664545554 999999999999999999999999999999954 343333 33332332 222221 1 1
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 014600 121 TLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSV 189 (422)
Q Consensus 121 ~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~ 189 (422)
+.+ . .+ ...++++++++..+.+..+++.+.++ +++++..+.......+|..+++.+++.+.+.
T Consensus 304 ~~~-~--~~-~~~~l~G~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~ 366 (394)
T PRK10213 304 DKI-V--AT-GVAIIWGLTFALVPVGWSTWITRSLA--DQAEKAGSIQVAVIQLANTCGAAIGGYALDN 366 (394)
T ss_pred hHH-H--HH-HHHHHHHHHHHhhhHHHHHHHHHHCc--ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 111 1 11 12346788888888888888887764 4556666666667778888888887777653
No 190
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.23 E-value=0.00085 Score=71.15 Aligned_cols=170 Identities=14% Similarity=0.061 Sum_probs=106.8
Q ss_pred HHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhc-ccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCcc
Q 014600 44 FTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELID-RFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTST 121 (422)
Q Consensus 44 ~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsD-r~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~ 121 (422)
.+-+..|+++. |.+.+.+..+.....-+.-+...+.|+++| ++||+|. ++.+.++..++..++..+..| +...
T Consensus 7 ~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~t-Il~~~ii~~lG~~llai~a~~----~~~~ 81 (654)
T TIGR00926 7 RTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKT-ILYLSIVYVVGHALLSFGAIP----SSGH 81 (654)
T ss_pred HHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHH-HHHHHHHHHHHHHHHHhccCc----cccc
Confidence 34566777776 999999999988888888888899999999 4899887 556777777777665532222 1111
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCcc--chhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchH
Q 014600 122 LKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNST--SRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLE 199 (422)
Q Consensus 122 ~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~--eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~~~~ 199 (422)
.......+ +...+..+|.+.+-....+...|..++.+ +|.+...+-....++|++++..+...+-...+.+| ..
T Consensus 82 ~~~~~~~l-~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg---~~ 157 (654)
T TIGR00926 82 PLHDLLDL-LGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFG---CQ 157 (654)
T ss_pred chHHHHHH-HHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc---cC
Confidence 11111122 12234556667777888899998876432 35667777777788887776655433221211111 12
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhc
Q 014600 200 NQYRWIAYSSIFIGCCFVGIFLS 222 (422)
Q Consensus 200 ~~~~~~~~i~~~i~~i~~~i~~~ 222 (422)
.+|...+.+.++..++..++...
T Consensus 158 ~~~~~aF~i~~i~m~ia~lvf~~ 180 (654)
T TIGR00926 158 DCYPLAFGVPAILMILALIVFMA 180 (654)
T ss_pred cchHHHHHHHHHHHHHHHHHHHH
Confidence 36777777766666665555443
No 191
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.23 E-value=4.3e-05 Score=76.43 Aligned_cols=58 Identities=26% Similarity=0.196 Sum_probs=42.8
Q ss_pred HHHHHHHHHh-CCChhHHHHHHHHH-HHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHH
Q 014600 45 TYLLLFLTDI-GLSPRGAAAVMLSG-QIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVS 103 (422)
Q Consensus 45 ~~l~~f~t~~-gls~~~~g~i~~i~-~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~ 103 (422)
.+.++|+.+. |+++.++|.++... .+...+..++.|++.||+||||... .+.....+.
T Consensus 230 ~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~-~~~~~~~l~ 289 (402)
T PRK11902 230 SLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLM-LFGVLQAVS 289 (402)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHH-HHHHHHHHH
Confidence 4555677776 99999999998654 4457788899999999999988743 444444433
No 192
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.20 E-value=2.2e-05 Score=89.14 Aligned_cols=153 Identities=10% Similarity=-0.011 Sum_probs=102.7
Q ss_pred eeccchhHHHHHHHHHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHH-H
Q 014600 29 YGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFS-S 106 (422)
Q Consensus 29 y~~g~~~~~~~~~~~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~-~ 106 (422)
..++.+...+......++++.|+++. |.++...|++++...+...+..++.|+++||.++++.. ..+.+..++... +
T Consensus 230 ~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~-~~~~~~~~~~~~~l 308 (1140)
T PRK06814 230 AILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYV-PIGALLMGLFGLDL 308 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeee-hHHHHHHHHHHHHH
Confidence 34444444555556667899999998 99999999999999999999999999999987776653 334444433332 2
Q ss_pred hhcC-cc--Ccc-------ccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHH
Q 014600 107 VFGG-CM--PCR-------ILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVAN 176 (422)
Q Consensus 107 lf~~-~~--p~~-------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~ 176 (422)
.+.. .. +.. +....+.+ . ..+..++++++.++.+++..+++.+.++ +++|+++.+..+....+|.
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~g~~~~~~~~~~~~~~~~~~p-~~~~G~v~g~~~~~~~~~~ 383 (1140)
T PRK06814 309 AFASSSVPAEPAQLKSILVFLSKRHGW-R---ILIDLFGLAAAGGLYIVPLFAALQAWAN-PAHRARVIAANNVLNAAFM 383 (1140)
T ss_pred HhcccccccccccccchhhhhcccccH-H---HHHHHHHHHHHHHHhHHHHHHHHHhhCC-cccceeeeHHHHHHHHHHH
Confidence 1210 00 000 00001111 1 1222345778888888999999999876 6899999999998888888
Q ss_pred HHHHHHHHHHH
Q 014600 177 LSLYAIAFIVF 187 (422)
Q Consensus 177 ~l~~~~~~~l~ 187 (422)
.+++.+.+.+.
T Consensus 384 ~ig~~~~g~l~ 394 (1140)
T PRK06814 384 VAGTIILALLQ 394 (1140)
T ss_pred HHHHHHHHHHH
Confidence 88777665554
No 193
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=98.20 E-value=2.1e-05 Score=77.02 Aligned_cols=143 Identities=12% Similarity=0.002 Sum_probs=88.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHH--HHHHHHHHHHHhhcC
Q 014600 34 MLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGA--GSVLVAVSFSSVFGG 110 (422)
Q Consensus 34 ~~~~~~~~~~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~--g~i~~~i~~~~lf~~ 110 (422)
+...........+++.|+.+. |.++.+.+.+..+..+...+..++.|+++||+++||...+. ......++....+.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~- 304 (379)
T TIGR00881 226 VFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWL- 304 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhc-
Confidence 333444445567889999887 99999999999999999999999999999986543332221 11222222222121
Q ss_pred ccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 014600 111 CMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFS 188 (422)
Q Consensus 111 ~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~ 188 (422)
.| ..+.. ...+...+.+...........++..|..+ +++|++..++.+....+|+.+++.+.+.+.+
T Consensus 305 -~~-----~~~~~----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 371 (379)
T TIGR00881 305 -NP-----AANPL----MDLICLFALGFLVYGPQMLIGVIASELAP-KKAAGTAAGFVGFFAYLGGILAGLPLGYLAD 371 (379)
T ss_pred -Cc-----chhHH----HHHHHHHHHHHHHhhhhHHHHHHHHHhcC-cchhHHHHHHHHHhhhhhhhhhhhhHHHHHH
Confidence 11 11111 11111123333333333334566777765 6789999999988888888888777666654
No 194
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.19 E-value=0.00011 Score=73.28 Aligned_cols=127 Identities=10% Similarity=-0.004 Sum_probs=86.4
Q ss_pred HHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCccch
Q 014600 45 TYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLK 123 (422)
Q Consensus 45 ~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~~ 123 (422)
..++.|..+. |.++.+.|.++....+...+..++.|++.||+++||. +..+. ..++...++. +. .+.+
T Consensus 226 ~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~-~~~g~-~~~~~~~~~~-------~~--~~~~ 294 (393)
T PRK11195 226 FLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRV-LPAGI-LMGLVVLLMA-------LQ--HSLL 294 (393)
T ss_pred HHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccch-HHHHH-HHHHHHHHHH-------HH--hHHH
Confidence 3445667776 9999999999999999999999999999999998775 44443 3333222111 01 1111
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 014600 124 VETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIV 186 (422)
Q Consensus 124 ~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l 186 (422)
. ..+...+.+++.+..++|.++...+..+++..|++..+..+...+++..++..+...+
T Consensus 295 -~---~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~ 353 (393)
T PRK11195 295 -P---AYPLLILIGALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLL 353 (393)
T ss_pred -H---HHHHHHHHHHhhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHH
Confidence 1 1122235777778888889888877543222378999998888888888877666533
No 195
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.17 E-value=4.5e-05 Score=75.22 Aligned_cols=55 Identities=16% Similarity=0.207 Sum_probs=45.8
Q ss_pred HHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHH
Q 014600 44 FTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVL 99 (422)
Q Consensus 44 ~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~ 99 (422)
..+.+.++.+. |.++.+.|.+..+..+...+..++.|++.||+||||.+. .+...
T Consensus 214 ~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~-~~~~~ 269 (377)
T PRK11102 214 LTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLR-FGLWI 269 (377)
T ss_pred HHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHH-HHHHH
Confidence 34456777776 999999999999999999999999999999999988744 44443
No 196
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.16 E-value=5.4e-05 Score=79.51 Aligned_cols=242 Identities=11% Similarity=0.066 Sum_probs=150.4
Q ss_pred HHHHHHHHHHHHHh----CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcC--c-cC
Q 014600 41 ACWFTYLLLFLTDI----GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGG--C-MP 113 (422)
Q Consensus 41 ~~~~~~l~~f~t~~----gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~--~-~p 113 (422)
.+...|+..-.|.+ +++..+.|++....-+-+.+...++.|..-|. +|-.|+-+|.++++++.++.-.| . -|
T Consensus 110 ~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~-HrPr~Ig~G~~~m~lgsll~alPHf~~~~ 188 (735)
T KOG3626|consen 110 GLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRG-HRPRWIGIGLVLMGLGSLLFALPHFFSGP 188 (735)
T ss_pred HhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhcccc-CccceeeechhHHHHHHHHHhChHHhcCc
Confidence 33345555555542 88889999998888888888888888888774 44557888999998887665432 0 00
Q ss_pred c----------cccC---------------------C-----ccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCC
Q 014600 114 C----------RILS---------------------T-----STLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLN 157 (422)
Q Consensus 114 ~----------~~~~---------------------~-----~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~ 157 (422)
. .-.+ + .+..+.++.+++..++.+++-+ |..++.....+|
T Consensus 189 y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~T----pi~tlGisYiDD 264 (735)
T KOG3626|consen 189 YEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGAT----PIFTLGISYIDD 264 (735)
T ss_pred chhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCC----CCccCCCccccc
Confidence 0 0000 0 0111122233322234455544 555555444444
Q ss_pred ---ccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCC-------CCc--hHHHHHHHHHHHHHHHHHHHhhhhcccc
Q 014600 158 ---STSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKT-------HAD--LENQYRWIAYSSIFIGCCFVGIFLSRTE 225 (422)
Q Consensus 158 ---~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g-------~~~--~~~~~~~~~~i~~~i~~i~~~i~~~~~~ 225 (422)
+++-....++......+|.+++..++........+.| ..| |.-.|..-+++.+.+.++..+..+++-|
T Consensus 265 nvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk 344 (735)
T KOG3626|consen 265 NVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFPK 344 (735)
T ss_pred cccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCcc
Confidence 2333456677777777787777777766655432221 122 2234555577788888887777777776
Q ss_pred Cccccc------------ccC----CC-------cchhhhHHHHHHhHHHHHHHHHHHHHHHHHHhhhHHHHHHhhhccC
Q 014600 226 EPRLKM------------GLR----GN-------SHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLR 282 (422)
Q Consensus 226 E~~~~~------------~~~----~~-------~~~~~~~~~~~~n~~f~~~~~~~~~~~~~~~~~~~y~~~y~~~~~~ 282 (422)
|.+.+. +++ ++ +++.+.++.+++||-|...++...+......+..+|.|+|++.+.+
T Consensus 345 ~lp~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg 424 (735)
T KOG3626|consen 345 ELPKSQKRKRARDLHVLKTESGGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGYITFLPKYLETQFG 424 (735)
T ss_pred cCccccccchhhhhcccccccccccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcC
Confidence 654211 000 11 1234567889999999888888888888899999999999999999
Q ss_pred ccchh
Q 014600 283 MGQSA 287 (422)
Q Consensus 283 l~~~~ 287 (422)
.+++.
T Consensus 425 ~sas~ 429 (735)
T KOG3626|consen 425 ISASL 429 (735)
T ss_pred CCHHH
Confidence 88765
No 197
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.14 E-value=3.6e-05 Score=78.29 Aligned_cols=179 Identities=14% Similarity=0.063 Sum_probs=113.2
Q ss_pred eeeeccchhHHHHHHHHHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccC--------CchhHHHHHH
Q 014600 27 LYYGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFG--------HFKIWHGAGS 97 (422)
Q Consensus 27 ~~y~~g~~~~~~~~~~~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~G--------rrrp~ll~g~ 97 (422)
++--+..++.+....+...|+|.|+.|+ |++....|+..++..+...+...+.|+++||.= +||.+--++.
T Consensus 261 wai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~ 340 (466)
T KOG2532|consen 261 WAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAF 340 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHH
Confidence 4556677888888888899999999999 999999999999999999999999999999632 3444433444
Q ss_pred HHHHHHHHHhhcCccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccC-CccchhhHHHHHHHHHHHHH
Q 014600 98 VLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITL-NSTSRVVLTSCRNAFTMVAN 176 (422)
Q Consensus 98 i~~~i~~~~lf~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~-~~~eR~~l~~~~~~~~~ig~ 176 (422)
...++.+..+- .++ ....+...+.+. ...+....+.+-. .-...+ .|+.-+.+.+..+....+++
T Consensus 341 ~~~ai~l~~l~--~~~-----~~~~~~a~~~l~-----~~~~~~g~~~~Gf--~~~~~~~apq~a~~l~g~~~~~~~~~~ 406 (466)
T KOG2532|consen 341 GGPAVFLLVLA--FTS-----DEHRLLAVILLT-----IAIGLSGFNISGF--YKNHQDIAPQHAGFVMGIINFVGALAG 406 (466)
T ss_pred HHHHHHHHeee--ecC-----CCcchHHHHHHH-----HHHHHcccchhhh--HhhhhhccchHHHHHHHHHHHHHHHHH
Confidence 44444433321 112 112222222222 1122222222111 111122 34555678888888888777
Q ss_pred HHHHHHHHHHHhhccCCCCCchHHHHHHHHHHHHHHHHHHHhhhhccccC
Q 014600 177 LSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEE 226 (422)
Q Consensus 177 ~l~~~~~~~l~~~~~~~g~~~~~~~~~~~~~i~~~i~~i~~~i~~~~~~E 226 (422)
++++.+.+.++. .+...+|++++.+.+.+.+++.++..++-+.
T Consensus 407 ~~~P~~vg~~~~-------~~t~~eW~~VF~i~a~i~~~~~i~f~~f~s~ 449 (466)
T KOG2532|consen 407 FIAPLLVGIIVT-------DNTREEWRIVFLIAAGILIVGNIIFLFFGSG 449 (466)
T ss_pred HHHHHheeeEeC-------CCCHHHHHHHHHHHHHHHHHhchheeEeecC
Confidence 776655443332 1246799999999998888887766555443
No 198
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.14 E-value=3.4e-05 Score=76.70 Aligned_cols=63 Identities=13% Similarity=-0.010 Sum_probs=50.1
Q ss_pred HHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhh
Q 014600 45 TYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVF 108 (422)
Q Consensus 45 ~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf 108 (422)
.+.+.++.+. |.++.+.|.+++...+...+..++.|+++||+||||.+ ..+.....++..++.
T Consensus 224 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~-~~~~~~~~~~~~~~~ 287 (392)
T PRK10473 224 NTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLM-LTSQVLFLAAGITLA 287 (392)
T ss_pred HhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHH-HHHHHHHHHHHHHHH
Confidence 4456667666 99999999999999999999999999999999998874 456666666555443
No 199
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.13 E-value=2.6e-05 Score=80.50 Aligned_cols=172 Identities=11% Similarity=-0.081 Sum_probs=88.0
Q ss_pred HHHHHHHHHHhCCChhHHHH------------HHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCc
Q 014600 44 FTYLLLFLTDIGLSPRGAAA------------VMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGC 111 (422)
Q Consensus 44 ~~~l~~f~t~~gls~~~~g~------------i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~ 111 (422)
..+.|.++++.|++....+. ...+..+...+...+.|+++||+|||+.. +.+....+++..++..
T Consensus 308 ~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l-~~~~~~~~~~~~~l~~-- 384 (502)
T TIGR00887 308 NLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQ-LMGFFILTVLFFVLGF-- 384 (502)
T ss_pred ccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHH-HHHHHHHHHHHHHHHH--
Confidence 34566777666776542211 12233334444667889999999998874 4555555554433221
Q ss_pred cCccccCCccchhhhHHHHHHHHHHHHHHHH-HHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 014600 112 MPCRILSTSTLKVETISYCVFAAIFNVGWAA-TQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVS 190 (422)
Q Consensus 112 ~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~ 190 (422)
. ..+..... ....+. ++...++. .......+.+|+.+ .+.|++..++.+..+.+|+++++.+.+.+.+..
T Consensus 385 -~--~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~E~~p-~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~ 455 (502)
T TIGR00887 385 -A--YNHLSTHG-FLAIYV----LAQFFANFGPNATTFIVPGEVFP-TRYRSTAHGISAASGKAGAIIGQFGFLYLAQHG 455 (502)
T ss_pred -H--HHhcchhH-HHHHHH----HHHHHHhcCCCchhhhhhhccCc-hhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccc
Confidence 0 00000111 111111 11111111 11223455688876 578999999999999999988877665554421
Q ss_pred cCCCCCchHHHHHHHHHHHHHHHHHHHhhhhccccCcc
Q 014600 191 TAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPR 228 (422)
Q Consensus 191 ~~~g~~~~~~~~~~~~~i~~~i~~i~~~i~~~~~~E~~ 228 (422)
+.....+...++...+.+++++.++..+. ++++||++
T Consensus 456 ~~~~~~~~~~~~~~~~~i~~~~~~~~~i~-~~~lpEt~ 492 (502)
T TIGR00887 456 DPTKGYPTGIWMGHVLEIFALFMFLGILF-TLLIPETK 492 (502)
T ss_pred cccccccccccchHHHHHHHHHHHHHHHH-heEeccCC
Confidence 10000000123334455555555555443 45668854
No 200
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.12 E-value=3.1e-05 Score=75.85 Aligned_cols=132 Identities=11% Similarity=0.057 Sum_probs=87.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHH-HHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCcc
Q 014600 34 MLNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQ-IADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCM 112 (422)
Q Consensus 34 ~~~~~~~~~~~~~l~~f~t~~gls~~~~g~i~~i~~-l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~ 112 (422)
+..........++++.|.++.|.++.++|.+..+.. +...+..++.|+++||+||||. +..+.+..++...+... .
T Consensus 219 ~~~~~~~~~~~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~-l~~~~~~~~~~~~~~~~--~ 295 (356)
T TIGR00901 219 VLYKLGDSAATVLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYA-LLLFGIVQALTNAGFVW--L 295 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHH-HHHHHHHHHHHHHHHHH--H
Confidence 334455555667888888888999999999887655 5667888999999999999888 44555655555443221 0
Q ss_pred CccccCC-c--cchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHH
Q 014600 113 PCRILST-S--TLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFT 172 (422)
Q Consensus 113 p~~~~~~-~--~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~ 172 (422)
+...... . ...+ ......++.+++.+..+.+..++..+.++ +|+|++..+..+...
T Consensus 296 ~~~~~~~~~~~~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~p-~~~~g~~~g~~~~~~ 354 (356)
T TIGR00901 296 ASNGHHDGITFPHLL---MLFLTITLEAVTGGLGTVAFVAFLSKLSN-PKFGATQMALLSSLS 354 (356)
T ss_pred HhcCcccccccchHH---HHHHHHHHHHHHhHHHHHHHHHHHHHhcC-CCccHHHHHHHHHHH
Confidence 0000000 0 1111 11112235678888899999999999986 689999888765543
No 201
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.12 E-value=4.7e-05 Score=77.98 Aligned_cols=151 Identities=11% Similarity=0.076 Sum_probs=95.4
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcC
Q 014600 31 SGHMLNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGG 110 (422)
Q Consensus 31 ~g~~~~~~~~~~~~~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~ 110 (422)
...+..++......++.++|.+...-+....+.+..+..+...+..|+.++++||+||||.++ .+....+++...++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~-~~~~~~~~~~~~~~~- 315 (473)
T PRK10429 238 GMALAYNIASNIINGFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWA-GASIFPVLSCGVLLL- 315 (473)
T ss_pred HHHHHHHHHHHHHhhheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHH-HHHHHHHHHHHHHHH-
Confidence 334445555556666666555555335667777888777888899999999999999999865 444444444333221
Q ss_pred ccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccc------hhhHHHHHHHHHHHHHHHHHHHHH
Q 014600 111 CMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTS------RVVLTSCRNAFTMVANLSLYAIAF 184 (422)
Q Consensus 111 ~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~e------R~~l~~~~~~~~~ig~~l~~~~~~ 184 (422)
.. +.+.. ..+. ..+...+.+++.+..+....++++|..+..+. .+...+......-+|..+++.+.+
T Consensus 316 -~~--~~~~~-~~~~---~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g 388 (473)
T PRK10429 316 -MG--LAAPH-NALL---IVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIG 388 (473)
T ss_pred -Hh--ccCch-hHHH---HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 01111 1111 12223457788888888889999998753211 233677777888888888887777
Q ss_pred HHHhhc
Q 014600 185 IVFSVS 190 (422)
Q Consensus 185 ~l~~~~ 190 (422)
.+++..
T Consensus 389 ~~l~~~ 394 (473)
T PRK10429 389 VVLGLI 394 (473)
T ss_pred HHHHHc
Confidence 777654
No 202
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=98.12 E-value=3.3e-07 Score=94.88 Aligned_cols=242 Identities=10% Similarity=0.066 Sum_probs=1.5
Q ss_pred HHHHHHHHHHH----hCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccC
Q 014600 43 WFTYLLLFLTD----IGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILS 118 (422)
Q Consensus 43 ~~~~l~~f~t~----~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~ 118 (422)
.+.|...-.|. .+++.++.|++.+.+-+...+...++.|+.+| |+|-.|+-+|.++++++.++.- +|-...+
T Consensus 18 ~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~-~hrprwig~g~~~~~~g~~l~~---lPhf~~~ 93 (539)
T PF03137_consen 18 VSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGR-GHRPRWIGIGALLMGLGSLLFA---LPHFLSG 93 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhh-cCCcceeeecHHHHHHHHHHHh---ccHhhcC
Confidence 34444444443 49999999999999999999999999999987 5667789899999998875533 3421110
Q ss_pred C-----c-------------------------------cchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCC---cc
Q 014600 119 T-----S-------------------------------TLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLN---ST 159 (422)
Q Consensus 119 ~-----~-------------------------------~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~---~~ 159 (422)
. . ........|..+.++-++..++-..|.+++.....+| ++
T Consensus 94 ~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~ 173 (539)
T PF03137_consen 94 PYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKK 173 (539)
T ss_dssp ----------------------------------------------------------SSS-------------------
T ss_pred CCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccc
Confidence 0 0 0000000111111233344445555666666655554 22
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCC----------Cch--HHHHHHHHHHHHHHHHHHHhhhhccccCc
Q 014600 160 SRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTH----------ADL--ENQYRWIAYSSIFIGCCFVGIFLSRTEEP 227 (422)
Q Consensus 160 eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~----------~~~--~~~~~~~~~i~~~i~~i~~~i~~~~~~E~ 227 (422)
+-....++......+|..++..+++..+....+.+. .|. .-+|-.-+++.+.+.++..+..+.+-|+-
T Consensus 174 ~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FPk~l 253 (539)
T PF03137_consen 174 NSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFPKKL 253 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCCccC
Confidence 334455666667777777777766665543221111 111 11232224445555555444444443332
Q ss_pred ccc------------ccc--------CCC---------cchhhhHHHHHHhHHHHHHHHHHHHHHHHHHhhhHHHHHHhh
Q 014600 228 RLK------------MGL--------RGN---------SHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVI 278 (422)
Q Consensus 228 ~~~------------~~~--------~~~---------~~~~~~~~~~~~n~~f~~~~~~~~~~~~~~~~~~~y~~~y~~ 278 (422)
+.+ +++ +++ +++.+.++.++|||.|....+...+......+..++.|+|++
T Consensus 254 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~~~G~~tF~pKylE 333 (539)
T PF03137_consen 254 PGTSERQEEKESSERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFESFIVSGFATFLPKYLE 333 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCcccccchhhhhhcchhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 211 000 000 122345678899999988888888888888899999999999
Q ss_pred hccCccchhH
Q 014600 279 NDLRMGQSAK 288 (422)
Q Consensus 279 ~~~~l~~~~~ 288 (422)
.+.+++++..
T Consensus 334 ~QF~~sas~A 343 (539)
T PF03137_consen 334 SQFGLSASQA 343 (539)
T ss_dssp ----------
T ss_pred HHhCCCHHHH
Confidence 9988887653
No 203
>PRK09669 putative symporter YagG; Provisional
Probab=98.11 E-value=5e-05 Score=77.05 Aligned_cols=145 Identities=14% Similarity=0.083 Sum_probs=88.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCcc
Q 014600 34 MLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCM 112 (422)
Q Consensus 34 ~~~~~~~~~~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~ 112 (422)
+.............++|.++. +. +...+.+.....+...+..|+.++++||+||||.+. .+.+..++....++. .
T Consensus 239 ~~~~~~~~~~~~~~~y~~~~~~~~-~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~-~~~~~~~~~~~~~~~--~ 314 (444)
T PRK09669 239 VVLLTAVVTRGGATLYYVNYVLLR-PDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFK-WTIVAFVILSALIFF--I 314 (444)
T ss_pred HHHHHHHHHHhhhhheeeeeecCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHH-HHHHHHHHHHHHHHH--h
Confidence 333344444444445555555 43 444555666667777788899999999999999865 444444433332221 1
Q ss_pred CccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccc------hhhHHHHHHHHHHHHHHHHHHHHHHH
Q 014600 113 PCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTS------RVVLTSCRNAFTMVANLSLYAIAFIV 186 (422)
Q Consensus 113 p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~e------R~~l~~~~~~~~~ig~~l~~~~~~~l 186 (422)
| + .+.+ . ..+..++.+++.+......+++.+|..+..+. .+...+..+....+|..+++.+++.+
T Consensus 315 ~----~-~~~~-~---~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~l 385 (444)
T PRK09669 315 P----P-SNVW-L---IFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWI 385 (444)
T ss_pred C----c-chHH-H---HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 1 1111 1 12223467888888888889999998752221 23466777777788888888888777
Q ss_pred Hhhcc
Q 014600 187 FSVST 191 (422)
Q Consensus 187 ~~~~~ 191 (422)
++..+
T Consensus 386 l~~~G 390 (444)
T PRK09669 386 LAWVD 390 (444)
T ss_pred HHHcC
Confidence 77543
No 204
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.10 E-value=1.8e-08 Score=102.23 Aligned_cols=150 Identities=15% Similarity=0.050 Sum_probs=101.6
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCccchhhhHHHHHHHHHHHH
Q 014600 59 RGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNV 138 (422)
Q Consensus 59 ~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~ 138 (422)
...+++.+...+...++.++.|+++||+|||+.++ .+..+..++..+... ++..... ..+.+.+.+.++
T Consensus 46 ~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~-~~~~~~~i~~~~~~~-------~~~~~~~---~~~~~~R~~~G~ 114 (451)
T PF00083_consen 46 LLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALI-ISALLMIIGSILIAF-------APSYNNF---WMLLIGRFLIGF 114 (451)
T ss_pred HHHHHHHHHHHhhhccccccccccccccccccccc-ccccccccccccccc-------ccccccc---cccccccccccc
Confidence 46788899999999999999999999999998855 566666666544321 2211011 123333456788
Q ss_pred HHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchHHHHHHHHHHHHHHHHHHHh
Q 014600 139 GWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVG 218 (422)
Q Consensus 139 ~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~~~~~~~~~~~~i~~~i~~i~~~ 218 (422)
+.+........++.|..+ ++.|++..+.......+|.+++..+.... ... +...+||+...+.++..++..
T Consensus 115 ~~g~~~~~~~~~~~E~~~-~~~R~~~~~~~~~~~~~G~~~~~~~~~~~-~~~------~~~~~Wr~~~~~~~~~~l~~~- 185 (451)
T PF00083_consen 115 GIGGAYVVSPIYISEIAP-PKHRGFLSSLFQLFWALGILLASLIGYIV-SYY------SDNWGWRILLIFGAIPSLLVL- 185 (451)
T ss_pred cccccccccccccccccc-ccccccccccccccccccccccccccccc-ccc------ccccccccccccccccccccc-
Confidence 888888888889999986 67899999988888888877766544222 211 113478888776666665543
Q ss_pred hhhccccCcc
Q 014600 219 IFLSRTEEPR 228 (422)
Q Consensus 219 i~~~~~~E~~ 228 (422)
+....+||.|
T Consensus 186 ~~~~~~pESP 195 (451)
T PF00083_consen 186 LLRFFLPESP 195 (451)
T ss_pred cccccccccc
Confidence 3446677753
No 205
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.08 E-value=0.00026 Score=73.28 Aligned_cols=134 Identities=11% Similarity=0.064 Sum_probs=97.6
Q ss_pred HHHHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCC
Q 014600 41 ACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILST 119 (422)
Q Consensus 41 ~~~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~ 119 (422)
......+|.+..+. |.++...|+++....+...++..+.+++.+|.+++|. +..+.+..+++...+.. .+
T Consensus 235 ~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~l-v~~~~~~~a~~~~~lal-------~~- 305 (524)
T PF05977_consen 235 SAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRL-VLLASLLFALALLLLAL-------SP- 305 (524)
T ss_pred hHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchh-hHHHHHHHHHHHHHHhc-------ch-
Confidence 33445678888887 9999999999999999999999999999999988776 45666666666544321 11
Q ss_pred ccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 014600 120 STLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSV 189 (422)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~ 189 (422)
+.+.. ++...+.+.++...+++.++..-+.++ ++.|+|+.+........+..+++.+.+.+.+.
T Consensus 306 -~~~~~----~~~l~l~G~~~~~~~~~~~t~~Q~~~P-~~~~GRv~si~~~~~~g~~~lGsll~G~la~~ 369 (524)
T PF05977_consen 306 -SFWLA----LIALFLAGAAWIIANSSLNTLVQLSVP-DWVRGRVFSIYQMVFFGGMPLGSLLWGFLADH 369 (524)
T ss_pred -HHHHH----HHHHHHHHHHHHHHHHHHHHHHHHhCC-HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11211 112235778888888888888777765 57899999998888888878888777766654
No 206
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.08 E-value=1e-05 Score=79.26 Aligned_cols=125 Identities=19% Similarity=0.125 Sum_probs=80.1
Q ss_pred HHHHHHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCcccc
Q 014600 39 TAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRIL 117 (422)
Q Consensus 39 ~~~~~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~ 117 (422)
......++++.|+++. |.++.++|.+..+..+...+..++.|+++||+||||.+.. +....+.+..++... . .
T Consensus 240 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~-~~~~~~~~~~~~~~~--~---~ 313 (366)
T TIGR00886 240 SFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLM-SFLGVAMGAFLVVLG--L---V 313 (366)
T ss_pred HHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHH-HHHHHHHHHHHHHhc--C---C
Confidence 3345567889999887 9999999999999999999999999999999999887543 444444443333210 1 1
Q ss_pred CCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHH
Q 014600 118 STSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVA 175 (422)
Q Consensus 118 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig 175 (422)
+..+........ .+.....+....+..++.++..+ ++|++..++.+...++|
T Consensus 314 ~~~~~~~~~~~~----~~~~~~~g~~~~~~~~~~~~~~~--~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 314 SPLSLAVFIVLF----VALFFFSGAGNGSTFALVPHIFR--RATGAVSGLVGAIGNLG 365 (366)
T ss_pred CcchHHHHHHHH----HHHHHHhccccchhhhcchhhch--hhcccHHHHHHHhccCC
Confidence 100111111111 23344445555556677777764 57888888766655543
No 207
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.05 E-value=0.0094 Score=60.68 Aligned_cols=203 Identities=8% Similarity=-0.031 Sum_probs=103.7
Q ss_pred hHHHHHHHHHHHHhhhh-hhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcC-ccCcc--ccCCc--------------
Q 014600 59 RGAAAVMLSGQIADGFA-TIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGG-CMPCR--ILSTS-------------- 120 (422)
Q Consensus 59 ~~~g~i~~i~~l~~ai~-~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~-~~p~~--~~~~~-------------- 120 (422)
..+..+....-+-.++. .|+.+++++|++|+|.+-.. ..++...+ ++|.. ..|.. +.++.
T Consensus 43 e~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~-~~~F~~~f-~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~ 120 (472)
T TIGR00769 43 EIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTV-ISPFLGFF-ALFAFVIYPLSDLLHPTALADKLLSLLPPGFM 120 (472)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHH-HHHHHHHH-HHHHHHHhcchhhcCCcHHHHHHHhhcchhhH
Confidence 46777777776666666 89999999999999876433 22222222 22210 01211 00000
Q ss_pred ------cchhhhHHHHHHHHHHHHHHHH-HHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Q 014600 121 ------TLKVETISYCVFAAIFNVGWAA-TQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAK 193 (422)
Q Consensus 121 ------~~~~~~~~~~~~~~l~~~~~~~-~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~ 193 (422)
..|...+.|+ ...+.-.. ...-+++..+|.++ .+|-.|..+.-..++++|.++++.+...+.......
T Consensus 121 ~~i~~~~~W~~~~FYv----~~elw~~~vvS~lFW~fandi~t-~~qakRfy~l~~~ganlg~i~sg~~~~~~~~~~~~~ 195 (472)
T TIGR00769 121 GFIAILRIWSFALFYV----MAELWGSVVLSLLFWGFANQITT-IDEAKRFYALFGLGANVALIFSGRTIKYFSKLRASL 195 (472)
T ss_pred HHHHHHhhhhHHHHHH----HHHHHHHHHHHHHHHHHHHhcCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 0111112221 22222222 22368999999986 678889999999999999988876654443211100
Q ss_pred CCCchHHHH--HHHHHHHHHHHHHHHhhhhccccC-c---cc-------ccccCCCcchhhhHHHHHHhHHHHHHHHHHH
Q 014600 194 THADLENQY--RWIAYSSIFIGCCFVGIFLSRTEE-P---RL-------KMGLRGNSHARISWAYWFKKILYYQVALVYM 260 (422)
Q Consensus 194 g~~~~~~~~--~~~~~i~~~i~~i~~~i~~~~~~E-~---~~-------~~~~~~~~~~~~~~~~~~~n~~f~~~~~~~~ 260 (422)
..+.+..+. .....+.++.+.+. ..++....+ . +. +++++++.+..++++.++|+|..+.+.+.-+
T Consensus 196 ~~~~~~~~~~~~~l~~i~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~k~k~k~~~~es~k~i~~S~yL~~ia~~vi 274 (472)
T TIGR00769 196 GPGVDGWHVSLKNLMVIVICSGLAI-ILLYWWVNRNVLTDPRSYNPALKEKKVKPKMSTMESLKFLVSSPYILDLALLVI 274 (472)
T ss_pred ccccChHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcccCCccccchhhccccCCCCCCHHHHHHHHHhCHHHHHHHHHHH
Confidence 000111111 12333333333332 233322211 1 10 0111234456789999999998776665555
Q ss_pred HHHHHHHhh
Q 014600 261 LTRLVVNVS 269 (422)
Q Consensus 261 ~~~~~~~~~ 269 (422)
+.....+..
T Consensus 275 ~y~~~~nlv 283 (472)
T TIGR00769 275 AYGISINLV 283 (472)
T ss_pred HHHHHHHHH
Confidence 555554433
No 208
>TIGR00898 2A0119 cation transport protein.
Probab=98.00 E-value=0.00026 Score=72.97 Aligned_cols=145 Identities=12% Similarity=-0.023 Sum_probs=83.5
Q ss_pred CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCccchhhhHHHHHHHH
Q 014600 55 GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAA 134 (422)
Q Consensus 55 gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~~~~~~~~~~~~~ 134 (422)
+.+..... .+..+......++.++++||+|||+. +..+.+..+++..++.. .| +...+..... ..
T Consensus 354 ~~~~~~~~---~~~~~~~i~~~~~~~~l~dr~grr~~-~~~~~~~~~~~~l~~~~--~~-----~~~~~~~~~~----~~ 418 (505)
T TIGR00898 354 GGNIYLDL---FISGLVELPAKLITLLLIDRLGRRYT-MAASLLLAGVALLLLLF--VP-----VDLYFLRTAL----AV 418 (505)
T ss_pred CCChHHHH---HHHHHHHHHHHHHHHHHHHHhCCHHH-HHHHHHHHHHHHHHHHH--cC-----CCchHHHHHH----HH
Confidence 44443333 34455666677889999999999888 45566666666544432 12 1111111111 12
Q ss_pred HHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchHHHHHHHHHHHHHHHH
Q 014600 135 IFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGC 214 (422)
Q Consensus 135 l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~~~~~~~~~~~~i~~~i~~ 214 (422)
+...+.+.......++.+|..+ .+.|++..++.+....+|+++++.+.. +. ..++...+.+.+...+
T Consensus 419 ~~~~~~~~~~~~~~~~~~e~~p-~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~-----------~~~~~~~~~~~~~~~~ 485 (505)
T TIGR00898 419 LGKFGITSAFQMVYLYTAELYP-TVVRNLGVGVCSTMARVGSIISPFLVY-LG-----------EKWLFLPLVLFGGLAL 485 (505)
T ss_pred HHHHHHHHHHHHHHHHhccccc-HHHHhhhHhHHHHHHHHHHHHHhHHHH-HH-----------HHHHhhHHHHHHHHHH
Confidence 3334444444455677888876 578999999888888888887765543 21 1234445555555555
Q ss_pred HHHhhhhccccCcc
Q 014600 215 CFVGIFLSRTEEPR 228 (422)
Q Consensus 215 i~~~i~~~~~~E~~ 228 (422)
++.++. +..+|++
T Consensus 486 ~~~~~~-~~lpet~ 498 (505)
T TIGR00898 486 LAGILT-LFLPETK 498 (505)
T ss_pred HHHHHH-HcCcCCC
Confidence 554443 3456754
No 209
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=97.93 E-value=0.00023 Score=68.69 Aligned_cols=309 Identities=13% Similarity=0.070 Sum_probs=160.1
Q ss_pred HHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhc-----ccCCchhHHHHHHHHHHHHHHHhhcCc
Q 014600 37 DITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELID-----RFGHFKIWHGAGSVLVAVSFSSVFGGC 111 (422)
Q Consensus 37 ~~~~~~~~~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsD-----r~Grrrp~ll~g~i~~~i~~~~lf~~~ 111 (422)
++..++.. -+|..++.-|.|-+..|..-..+-=+ -.-.++.-+.| |+||||.|+.-...+.+..+.++-. +
T Consensus 44 GiP~GL~~-~iP~lL~ak~vSyt~~a~fS~ay~P~--sLKllWaPiVDs~y~k~~GrrksWvvp~q~llG~~mllLs~-~ 119 (510)
T KOG3574|consen 44 GIPLGLIG-AIPLLLQAKGVSYTSQAIFSFAYWPF--SLKLLWAPIVDSVYSKRFGRRKSWVVPCQYLLGLFMLLLSY-L 119 (510)
T ss_pred CCchhHhh-hhHHHhcCCCcchhhhhhhhhhhhHH--HHHHHHHhhhHHHHHHhhccccceeeehHHHHHHHHHHHhh-C
Confidence 33334433 33444442266655544433222111 12234455566 8999999987666665555544433 3
Q ss_pred cCccccCCcc-chhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHh--
Q 014600 112 MPCRILSTST-LKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFS-- 188 (422)
Q Consensus 112 ~p~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~-- 188 (422)
++.+...+.+ ....+..+. ..++.+..+..+++...+.-.+-. +++-+-+++....+.+.|..++..+...+-.
T Consensus 120 v~~~~g~ng~~p~v~~lt~~--f~LLnflaAtQDIAVDgwALtmLs-~e~lgyaST~q~Vg~~~GyfL~~~ifLaL~s~d 196 (510)
T KOG3574|consen 120 VDRGLGGNGGLPNVVALTLL--FLLLNFLAATQDIAVDGWALTMLS-RENLGYASTCQSVGQTAGYFLGNVVFLALESPD 196 (510)
T ss_pred CCcccccCCCCcchHHHHHH--HHHHHHHHhhhhhhhhHHHHHhcC-HhhcCchhHHHHHHHhhhHHhhcceeeEecChh
Confidence 5534332222 221222111 125666777888888888887764 6788888888888888887776543222111
Q ss_pred hccCC--C-CCc----hHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccCCCcchhhh---HHHHHHhHHHHHHHHH
Q 014600 189 VSTAK--T-HAD----LENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARIS---WAYWFKKILYYQVALV 258 (422)
Q Consensus 189 ~~~~~--g-~~~----~~~~~~~~~~i~~~i~~i~~~i~~~~~~E~~~~~~~~~~~~~~~~---~~~~~~n~~f~~~~~~ 258 (422)
+...+ . ..| .-.+|.|... .+.++...+..+.-||++++.++++..+.++. +++++|-|..+..+++
T Consensus 197 F~N~y~rs~P~~~g~ItL~gy~~fwg---~~~~vat~Lv~~~kke~~~~~~~e~~~~i~~~yk~l~~vLklk~v~~la~i 273 (510)
T KOG3574|consen 197 FCNTYLRSIPLDQGFITLAGYLWFWG---ALFIVATTLVALLKKENDESVDEELELGIHESYKLLRDVLKLKSVRWLAGI 273 (510)
T ss_pred hhhHHHhcCcCccceEEhhHHHHHHH---HHHHHHHHHHHHhcCCCchhhhhhhhcCHHHHHHHHHHHHcCccHHHHHHH
Confidence 00000 0 000 0124444322 33344444445666776654333333344444 4566777776665555
Q ss_pred HHHHHHHHHhhhHHHHHHhhhccCccchhHh-----HHHHH------------------HH--------HHHH-------
Q 014600 259 YMLTRLVVNVSQAYLAFYVINDLRMGQSAKA-----LVPAI------------------IY--------ICSF------- 300 (422)
Q Consensus 259 ~~~~~~~~~~~~~y~~~y~~~~~~l~~~~~~-----~iP~~------------------~~--------~~~~------- 300 (422)
-+..-.+.++.....+.-..|. |.+....+ .+|.- .+ ..+.
T Consensus 274 ~lt~K~gf~a~da~t~LkLle~-Gv~ke~Lal~~v~~~plqI~l~~~~gk~ta~~~pl~~~lka~~~R~~~~~~~t~Lv~ 352 (510)
T KOG3574|consen 274 LLTGKLGFQAADALTSLKLLEH-GVPKEELALIAVPLVPLQIALPLYIGKWTAGPRPLNVFLKAVPYRLGGGLVQTALVW 352 (510)
T ss_pred HHHHHHHhhhhhhccchHHHHc-CCChhHheeeeeehhhHHHhhhhhheeecCCCCcchHHHHhhhHHHHHHHHHHHHHh
Confidence 5555555555555555554443 33332211 12210 00 0000
Q ss_pred -----------------HHHH----HHHH-------HHhhhhhhhhcCccccccceehhhHHHHHHHHHHHHHHHHHhHh
Q 014600 301 -----------------IVSI----LLQV-------TGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSYQS 352 (422)
Q Consensus 301 -----------------~~~~----~~~v-------~~~~~~~~~~g~r~~g~~~~~s~~~~~~K~~~a~~~~i~g~~l~ 352 (422)
++.. +.++ .+....+-..+.+..|+ ++..-+...++|..--..+.+++.+
T Consensus 353 ~~~~~~~~~G~~~~~~~il~i~~y~~~~~~~ts~fv~~maf~aqisdp~iggT--ymTlLNTLsnLGg~wp~tv~l~l~D 430 (510)
T KOG3574|consen 353 WTPTLGHSDGTFPRGYYILLITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGT--YMTLLNTLSNLGGNWPGTVALWLAD 430 (510)
T ss_pred hhcccccCCCceeechHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccCcc--HHHHHHHHHHhcCCcHHHHHHHhcc
Confidence 0000 0111 11222344556778888 9999999999999998899999999
Q ss_pred hCCCcc
Q 014600 353 MSPTVL 358 (422)
Q Consensus 353 ~~Gy~~ 358 (422)
..++.+
T Consensus 431 ~ltv~~ 436 (510)
T KOG3574|consen 431 GLTVKQ 436 (510)
T ss_pred cCceee
Confidence 888765
No 210
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=97.90 E-value=0.00031 Score=67.82 Aligned_cols=136 Identities=9% Similarity=-0.063 Sum_probs=84.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHh---CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcC
Q 014600 34 MLNDITAACWFTYLLLFLTDI---GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGG 110 (422)
Q Consensus 34 ~~~~~~~~~~~~~l~~f~t~~---gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~ 110 (422)
+...........+++.|++|. |+++.+.+...........+...+.+++.||+|+||. +..+....++...+...
T Consensus 150 f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~-l~~~~~l~~~~~~l~~~- 227 (310)
T TIGR01272 150 FVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRY-LAFNAFLAVLLSIGAAL- 227 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHH-HHHHHHHHHHHHHHHHH-
Confidence 333334556678899999863 8999999999999999999999999999999998886 55666666655433321
Q ss_pred ccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 014600 111 CMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVF 187 (422)
Q Consensus 111 ~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~ 187 (422)
.+ +.. . .+.+ .+.+++.+.......++..+..++ +.++.+++ ...+.+|+.+.+.+.+.+.
T Consensus 228 ------~~--~~~-~--~~~~--~l~g~~~s~i~P~~~s~a~~~~~~--~~~~asai-~~~~~~Gg~i~P~l~G~la 288 (310)
T TIGR01272 228 ------TH--GYV-A--MWFV--LALGLFNSIMFPTIFSLALNALGR--HTSQGSGI-LCLAIVGGAIVPLLQGSLA 288 (310)
T ss_pred ------cC--CHH-H--HHHH--HHHHHHHHHHHHHHHHHHHhhhhh--hhhhhHHH-HHHHHhcchHHHHHHHHHH
Confidence 11 111 1 1111 245566665555555666554432 23344444 2445566655554443333
No 211
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=97.85 E-value=0.0001 Score=74.05 Aligned_cols=152 Identities=17% Similarity=0.124 Sum_probs=106.4
Q ss_pred eeeeccchhHHHHHHHHHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHH
Q 014600 27 LYYGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFS 105 (422)
Q Consensus 27 ~~y~~g~~~~~~~~~~~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~ 105 (422)
+......+......++.++...+|.+.+ |-+.......+........+..+++..+++|+||||.|. ++.+..+++..
T Consensus 239 ~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~-~~~~~~~i~~~ 317 (467)
T COG2211 239 LLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFL-IGLLLLAVGYL 317 (467)
T ss_pred HHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHH-HHHHHHHHHHH
Confidence 4444556666677777777777777777 888888888888888877777999999999999999976 56777788777
Q ss_pred HhhcCccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccc-h------hhHHHHHHHHHHHHHHH
Q 014600 106 SVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTS-R------VVLTSCRNAFTMVANLS 178 (422)
Q Consensus 106 ~lf~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~e-R------~~l~~~~~~~~~ig~~l 178 (422)
++|. .| ..+.+. .++..++.+++.+..+.-.+++++|..+ ++| | +...+....+.-+|..+
T Consensus 318 ~~~f--~~-----~~~~~l----~~~~~~i~~~g~~~~~~l~wam~~d~vD-yge~~TG~R~eGi~~s~~tF~~K~g~al 385 (467)
T COG2211 318 LLYF--TP-----AGSVVL----IVVALIIAGVGTGIANPLPWAMVADTVD-YGEWKTGVRREGIVYSGMTFFRKLGLAL 385 (467)
T ss_pred HHHh--hc-----CcchHH----HHHHHHHHHHHhhccccccHHHhcchhh-HHHHHhCCCchhhHHHHHHHHHHHHHHH
Confidence 7764 23 122221 1222356788888888888999999864 333 2 23455555666677777
Q ss_pred HHHHHHHHHhhcc
Q 014600 179 LYAIAFIVFSVST 191 (422)
Q Consensus 179 ~~~~~~~l~~~~~ 191 (422)
+..+.+.+++..+
T Consensus 386 a~~~~g~~L~~~G 398 (467)
T COG2211 386 AGFIPGWILGAIG 398 (467)
T ss_pred HHHHHHHHHHHcC
Confidence 7777667766543
No 212
>PRK11043 putative transporter; Provisional
Probab=97.84 E-value=0.00045 Score=68.87 Aligned_cols=133 Identities=14% Similarity=0.084 Sum_probs=75.6
Q ss_pred HHHHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCccc
Q 014600 43 WFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTL 122 (422)
Q Consensus 43 ~~~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~ 122 (422)
...+.+.++++.|.++.++|.......+...+...+.+++.||+|+||.. ..+.+..+++...++. .. .......
T Consensus 222 ~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~-~~~~~~~~~~~~~~~~--~~--~~~~~~~ 296 (401)
T PRK11043 222 WLTGSPFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLL-PWLLVLFAVSVIAIWL--AS--LLSHPSL 296 (401)
T ss_pred HHHHhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHH-HHHHHHHHHHHHHHHH--HH--HhccCcH
Confidence 34566777766699999999888777777777788889999999988753 3333333333222211 00 0001111
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 014600 123 KVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIV 186 (422)
Q Consensus 123 ~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l 186 (422)
... ++...+.+.+.+.......+...+.. +++|++..++.+.....++..++.+.+++
T Consensus 297 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~~~g~~~~~~~~~~~~~~~~~g~l 354 (401)
T PRK11043 297 VPL----LIPFCVMAAANGAIYPIVVAQALRPF--PQATGKAAALQNTLQLGLCFLASLLVSAL 354 (401)
T ss_pred HHH----HHHHHHHHHHHHHHHHHHHHHHhhhC--cccChHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 111 11112344455544444444444433 46799999988877666666655544444
No 213
>PRK11462 putative transporter; Provisional
Probab=97.84 E-value=0.0008 Score=68.72 Aligned_cols=142 Identities=12% Similarity=0.062 Sum_probs=82.5
Q ss_pred HHHHHHHHHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCc
Q 014600 36 NDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPC 114 (422)
Q Consensus 36 ~~~~~~~~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~ 114 (422)
..+......+...+|.+.+ |.+ ...+.++.+..+...+..++.++++||+|||+.+.............+.+. |
T Consensus 240 ~~~~~~~~~~~~~y~~~y~~g~~-~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~---~- 314 (460)
T PRK11462 240 NILAVCVRGGAMMYYVTWILGTP-EVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFV---P- 314 (460)
T ss_pred HHHHHHHHHhHhhhhhhhhcCCh-HHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHh---c-
Confidence 3344444455566667766 543 345667777778888899999999999999888543333222222222221 2
Q ss_pred cccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCcc----chh--hHHHHHHHHHHHHHHHHHHHHHHHHh
Q 014600 115 RILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNST----SRV--VLTSCRNAFTMVANLSLYAIAFIVFS 188 (422)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~----eR~--~l~~~~~~~~~ig~~l~~~~~~~l~~ 188 (422)
..+.... +. ..++.+++.+.......++.+|..+..+ +|. ...+.......+|..+++.+.+.+++
T Consensus 315 ----~~~~~~~---~~-~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~ 386 (460)
T PRK11462 315 ----MQASITM---FV-FIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLA 386 (460)
T ss_pred ----hhHHHHH---HH-HHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111111 11 1234566666666666788888764211 232 22444456777888888877777776
Q ss_pred hc
Q 014600 189 VS 190 (422)
Q Consensus 189 ~~ 190 (422)
..
T Consensus 387 ~~ 388 (460)
T PRK11462 387 YG 388 (460)
T ss_pred Hc
Confidence 53
No 214
>PRK10133 L-fucose transporter; Provisional
Probab=97.79 E-value=0.00048 Score=69.86 Aligned_cols=117 Identities=13% Similarity=-0.012 Sum_probs=74.2
Q ss_pred hHHHHHHHHHHHHHHHH-HHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCcc
Q 014600 35 LNDITAACWFTYLLLFL-TDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCM 112 (422)
Q Consensus 35 ~~~~~~~~~~~~l~~f~-t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~ 112 (422)
...........|++.|+ ++. |+++.++|..+....+...+..++.|++.||+||||. +..+....++...+...
T Consensus 269 ~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~-l~~~~~~~~~~~~~~~~--- 344 (438)
T PRK10133 269 CYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKV-LAAYALIAMALCLISAF--- 344 (438)
T ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHH-HHHHHHHHHHHHHHHHH---
Confidence 33333333446777775 566 9999999999999999999999999999999999987 44554444443322211
Q ss_pred CccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHH
Q 014600 113 PCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCR 168 (422)
Q Consensus 113 p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~ 168 (422)
.++ .. .... ..+++++.+....+..+...+..+ ++.+..++.-
T Consensus 345 ----~~~--~~-~~~~----~~l~glg~~~i~P~~~s~a~~~~~--~~~~~as~l~ 387 (438)
T PRK10133 345 ----AGG--HV-GLIA----LTLCSAFMSIQYPTIFSLGIKNLG--QDTKYGSSFI 387 (438)
T ss_pred ----cCC--hH-HHHH----HHHHHHHHHHHHHHHHHHHHcccc--hhhccchhHH
Confidence 111 11 1111 135677777777777777776543 2333444443
No 215
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=97.73 E-value=0.00015 Score=67.46 Aligned_cols=284 Identities=11% Similarity=0.055 Sum_probs=157.3
Q ss_pred CCChhHHHHHHHHHHHHhhhhhhhhhhhhcc-cCCchhHHHHHHHHHHHHHHHhhcCccCccccCCccchhhhHHHHHHH
Q 014600 55 GLSPRGAAAVMLSGQIADGFATIFIGELIDR-FGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFA 133 (422)
Q Consensus 55 gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr-~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~~~~~~~~~~~~ 133 (422)
.+..+...++.+++.+=+.+.--+.|++.|| +|-|.--++.+ +...++= +.|. . ....-.+.....-+
T Consensus 75 ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~-~fv~~Gq-liFa-------~--Ggi~~aFw~M~~GR 143 (459)
T KOG4686|consen 75 NIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILC-IFVFLGQ-LIFA-------A--GGISHAFWTMLAGR 143 (459)
T ss_pred ccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHH-HHHHHHH-HHHH-------h--chHHHHHHHHHhhh
Confidence 5667788889999999999888899999995 77553323322 2222221 2231 0 11111222333334
Q ss_pred HHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchHHHHHHHHH--HHHH
Q 014600 134 AIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAY--SSIF 211 (422)
Q Consensus 134 ~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~~~~~~~~~~~~--i~~~ 211 (422)
.+++++--...+..+.+...+.+ -+|-+.+.+......-+|+.+--.+.+++.+..+..-.+ .+.....+ .+..
T Consensus 144 F~FGIGgESlAVaQN~yav~wFK-GKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~~~~~~~---~ghT~LG~~l~~~~ 219 (459)
T KOG4686|consen 144 FLFGIGGESLAVAQNKYAVYWFK-GKELNFVFGLQLSVARLGSTVNFLLMPFLYDTMGRMFPG---VGHTLLGLWLCFEV 219 (459)
T ss_pred eeeccCchhhhhhhcceeEEEec-CccccchhhHHHHHHHhhceeeeeecHHHHHHHHHhccc---chHHHHHHHHHHHH
Confidence 57888877778889999988887 578888888887777777765555555665543321001 12122211 1222
Q ss_pred HHHHHHhhhhcc--c-cC---ccccccc--CCCcchhhhHHHHHHhHHHHHHHHHHHHHHHHHHhhhHHHHHHhhhccCc
Q 014600 212 IGCCFVGIFLSR--T-EE---PRLKMGL--RGNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRM 283 (422)
Q Consensus 212 i~~i~~~i~~~~--~-~E---~~~~~~~--~~~~~~~~~~~~~~~n~~f~~~~~~~~~~~~~~~~~~~y~~~y~~~~~~l 283 (422)
..+...++|... . .+ |..+.++ ..+++...+. .-+ .++||.+...-++...+..-+.+.=+.+.++..|+
T Consensus 220 ~tc~~slical~lg~~D~rAerilh~e~g~~Ge~pkLtdv-~~f-~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGl 297 (459)
T KOG4686|consen 220 KTCKQSLICALSLGLSDDRAERILHLEEGFLGEEPKLTDV-NTF-YPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGL 297 (459)
T ss_pred HHHHHHHHHHHHhhhhhhHHHHHHhhhcCcccCCcccccc-ccc-CccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCC
Confidence 333333333221 1 22 1111111 0011111111 111 35677666555555555555566667778888888
Q ss_pred cchhHh------------HHHHHH-----------HHHH-HHHHHHHH---------------HHH----------hhhh
Q 014600 284 GQSAKA------------LVPAII-----------YICS-FIVSILLQ---------------VTG----------ISMQ 314 (422)
Q Consensus 284 ~~~~~~------------~iP~~~-----------~~~~-~~~~~~~~---------------v~~----------~~~~ 314 (422)
++.... ..|... |+.+ ++..+.+. +.| +-+.
T Consensus 298 S~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~Ft~lsPy~~m~~lGLsysllAcslWP~v 377 (459)
T KOG4686|consen 298 SAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFFTFLSPYTSMTFLGLSYSLLACSLWPCV 377 (459)
T ss_pred ChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHhhhccHHHHHHHHhhhHHHHHHHHhhhh
Confidence 765421 223211 2222 22222211 111 2234
Q ss_pred hhhhcCccccccceehhhHHHHHHHHHHHHHHHHHhHhhCC-Cc
Q 014600 315 NVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSYQSMSP-TV 357 (422)
Q Consensus 315 ~~~~g~r~~g~~~~~s~~~~~~K~~~a~~~~i~g~~l~~~G-y~ 357 (422)
+...-+..-|+ -|+...-++++|-++.+.+.|.+++..| |+
T Consensus 378 a~~vpE~qLGT--aygf~qsIqNLgla~i~Iiag~i~d~~g~y~ 419 (459)
T KOG4686|consen 378 ASLVPEEQLGT--AYGFIQSIQNLGLAFIPIIAGFIADGDGSYD 419 (459)
T ss_pred hhhCCHHHhcc--hHHHHHHHHhhhhhHHhhhhheeecCCCchh
Confidence 55667777888 8999999999999999999999988776 54
No 216
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=97.66 E-value=0.0019 Score=63.60 Aligned_cols=131 Identities=12% Similarity=0.135 Sum_probs=94.6
Q ss_pred HHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHH-HhhcCccCccccCCc
Q 014600 43 WFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFS-SVFGGCMPCRILSTS 120 (422)
Q Consensus 43 ~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~-~lf~~~~p~~~~~~~ 120 (422)
+.++-..|-... |++..+..++.....+..+....+.|++.||+|-|+..+ .+.+...+..+ .++. ..
T Consensus 271 il~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~-~~lvi~~~~~~~~~~~---------~~ 340 (438)
T COG2270 271 ILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLM-IGLVILSIAALYLIFL---------EG 340 (438)
T ss_pred HHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeh-HHHHHHHHHHHHHHHc---------cc
Confidence 345667777755 999999999999999999999999999999999887644 45444444433 3332 11
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 014600 121 TLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSV 189 (422)
Q Consensus 121 ~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~ 189 (422)
. .-|.+..++.++..+..+...-++..++.+ ++|-++..++.+..+-.++.+++.+...+.+.
T Consensus 341 -~----~~f~i~gll~g~s~G~~qA~SRSy~~~lvp-~~k~~~fFglyaltgra~S~~gp~lv~v~t~i 403 (438)
T COG2270 341 -E----LDFWILGLLVGTSLGGAQASSRSYLARLVP-KGKEGRFFGLYALTGRAASFLGPFLVAVITQI 403 (438)
T ss_pred -c----HHHHHHHHHHHHhcchHHHHHHHHHHHhCC-CccccceeehhhhhhhHHHHHHHHHHHHHHHH
Confidence 1 112223346778888888888999999987 45667788888888888888887766555544
No 217
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=97.62 E-value=0.0015 Score=64.97 Aligned_cols=181 Identities=9% Similarity=0.019 Sum_probs=114.2
Q ss_pred ceeeeeeeccchhHHHHHHHHHHHHHHHHHHh----CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHH
Q 014600 23 RWSVLYYGSGHMLNDITAACWFTYLLLFLTDI----GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSV 98 (422)
Q Consensus 23 ~~~~~~y~~g~~~~~~~~~~~~~~l~~f~t~~----gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i 98 (422)
.++.+.+.+--.+....+......++.|+++. +.+....|.+.++.-+..+..--+..++.+|+|.|+..+ ++..
T Consensus 219 ~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Ll-lag~ 297 (412)
T PF01306_consen 219 MRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLL-LAGV 297 (412)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH-HHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHH-HHHH
Confidence 34444555555555556666666788888874 456778999999999999999999999999999998855 4555
Q ss_pred HHHHHHHHhhcCccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHH-HHHHHHHHH
Q 014600 99 LVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCR-NAFTMVANL 177 (422)
Q Consensus 99 ~~~i~~~~lf~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~-~~~~~ig~~ 177 (422)
..++=....-. .++ .+ ...+...+.++-+++..++..-.+.+..+ ++...++.... .....+|..
T Consensus 298 i~~iRi~~~~~-------~~~--~~----~i~~~klLH~~e~~l~lva~fkYI~~~fd-~rlsAt~y~v~~~~~~~~~~~ 363 (412)
T PF01306_consen 298 IMAIRIIGSGF-------ATN--PW----VISLIKLLHALEFPLLLVAAFKYITAHFD-KRLSATLYLVGFQFAKQIGII 363 (412)
T ss_dssp HHHHHHHHHHT---------S--HH----HHHHHHHHHHHHHHHHHHHHHHHHHHHS--GGGHHHHHHHHHTTTHHHHHH
T ss_pred HHHHHHHHHhh-------hcc--hH----HHHHHHHHHHHHHHHHHHHHHHHHHHhCC-HhHHHHHHHHHHHHHHHHHHH
Confidence 55554443321 111 12 12223356777778877777777777654 33333333332 234455555
Q ss_pred HHHHHHHHHHhhccCCCCCchHHHHHHHHHHHHHHHHHHHhhhhccccCcc
Q 014600 178 SLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPR 228 (422)
Q Consensus 178 l~~~~~~~l~~~~~~~g~~~~~~~~~~~~~i~~~i~~i~~~i~~~~~~E~~ 228 (422)
+.+...+.+.+ +.|++.++.+.+.+.+++.+++++..|+++
T Consensus 364 i~s~~~G~lyd----------~~G~~~tylimg~iv~~~~li~~f~l~~~~ 404 (412)
T PF01306_consen 364 ILSPLAGYLYD----------RIGFQHTYLIMGLIVLPFTLISAFTLKKDK 404 (412)
T ss_dssp HHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHHHS--SS
T ss_pred HHhhhHHhhHh----------hcCcHHHHHHHHHHHHHHHHHheeeecCCC
Confidence 55544444433 457888888888888888888888776654
No 218
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=97.59 E-value=0.00056 Score=70.01 Aligned_cols=132 Identities=8% Similarity=-0.065 Sum_probs=92.2
Q ss_pred CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCccchhhhHHHHHHHH
Q 014600 55 GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAA 134 (422)
Q Consensus 55 gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~~~~~~~~~~~~~ 134 (422)
|.++..+|.+..+..+...+...+.+++.+|++.|+. +.++.+..+++..+......-+.........+ +.....+
T Consensus 284 G~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~-l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~---~~~~~~~ 359 (468)
T TIGR00788 284 PGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLL-FGVTTLLYTLSSLFDLILVKRWNLAFGISDEV---FVLGDSI 359 (468)
T ss_pred CCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHH-HHHHHHHHHHHHhCceeeeeccccccCCCCee---eeeehhH
Confidence 9999999999999999999999999999999998776 45666666665433210000000000001110 1111224
Q ss_pred HHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 014600 135 IFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVST 191 (422)
Q Consensus 135 l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~ 191 (422)
+.++++.+..+|...++.++.+ +++++...+.-+...++|..+++.+++.+.+.++
T Consensus 360 l~~~~~g~~~~~~~~~~~~~~p-~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 360 IAEVLAQLKFMPFLVLLARLCP-SGCESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred HHHHHHHHHHccHHHHHHHhCC-CCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 6778888889999999999886 5778888888888888898888888777777654
No 219
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=97.57 E-value=0.0018 Score=64.31 Aligned_cols=129 Identities=12% Similarity=0.031 Sum_probs=77.3
Q ss_pred HHHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCc
Q 014600 42 CWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTS 120 (422)
Q Consensus 42 ~~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~ 120 (422)
....+.+.|+++. |.++.+.|.+.....+...+..++.+++.||+||+.. . +.....++...++. + ......
T Consensus 225 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~-~--~~~~~~~~~~~~~~---~-~~~~~~ 297 (394)
T PRK11652 225 VFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMW-Q--SVICCLLAGLLMWI---P-GWFGVM 297 (394)
T ss_pred HHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H--HHHHHHHHHHHHHH---H-HHhccc
Confidence 3345567788886 9999999999888877777888889999999884333 2 22222222222111 1 000011
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHH
Q 014600 121 TLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIA 183 (422)
Q Consensus 121 ~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~ 183 (422)
+.+ . ......+++.+.+....+..+...+.. +++|+...+..+....+|..+++.+.
T Consensus 298 ~~~-~---~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~g~~~~~~~~~~~lg~~~~~~~~ 354 (394)
T PRK11652 298 NVW-T---LLVPAALFFFGAGMLFPLATSGAMEPF--PYLAGTAGALLGGLQNIGSGLAALLS 354 (394)
T ss_pred cHH-H---HHHHHHHHHHHHHHHHHHHHHHHHhhc--cccchHHHHHHHHHHHHHHHHHHHHH
Confidence 111 1 111223566677776777777776655 35778888887777777776665443
No 220
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=97.51 E-value=0.0033 Score=64.75 Aligned_cols=116 Identities=10% Similarity=0.021 Sum_probs=76.8
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhcccCCchh------HHHHHHHHHHHHHHHhhc-C-ccCccccCCccchhhhHHHHHHH
Q 014600 62 AAVMLSGQIADGFATIFIGELIDRFGHFKI------WHGAGSVLVAVSFSSVFG-G-CMPCRILSTSTLKVETISYCVFA 133 (422)
Q Consensus 62 g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp------~ll~g~i~~~i~~~~lf~-~-~~p~~~~~~~~~~~~~~~~~~~~ 133 (422)
+.+..+..++..+..|+.|++.||.|||+. -+.+|.++.++++..+.. . ... ......+.+|....|
T Consensus 312 ~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~-~~~~~~s~~~~i~~~---- 386 (489)
T PRK10207 312 VSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFA-DAQGLTSPWFIVLVY---- 386 (489)
T ss_pred HHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCCccCHHHHHHHH----
Confidence 445556667777899999999999998862 144566666666543210 0 000 001112333333333
Q ss_pred HHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHH
Q 014600 134 AIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIA 183 (422)
Q Consensus 134 ~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~ 183 (422)
.+.+++..+...+-.+......+ ++.++.+++..+....+|+.++..+.
T Consensus 387 ~l~g~Ge~~~~~~g~~~~~~~aP-~~~~g~~~g~~~l~~~ig~~lg~~l~ 435 (489)
T PRK10207 387 LFQSLGELFISALGLAMIAALVP-QHLMGFILGMWFLTQAAAFLLGGYVA 435 (489)
T ss_pred HHHHHHHHHHhHHHHHHHHHhCh-HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 36888999999998888888876 67889999998888888888776654
No 221
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=97.46 E-value=0.0007 Score=69.80 Aligned_cols=172 Identities=16% Similarity=0.090 Sum_probs=105.7
Q ss_pred eeeeeeccchhHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHH
Q 014600 25 SVLYYGSGHMLNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSF 104 (422)
Q Consensus 25 ~~~~y~~g~~~~~~~~~~~~~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~ 104 (422)
..+.++.+.....+.+.....|++.|..+.|.+...+..++++..+.|.+.-++.|++.||...++.++...+++.....
T Consensus 299 ~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~ 378 (509)
T KOG2504|consen 299 KFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLA 378 (509)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHH
Confidence 34556666666666666666777888886799999999999999999999999999999998866666543333332222
Q ss_pred HHhhcCccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHH
Q 014600 105 SSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAF 184 (422)
Q Consensus 105 ~~lf~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~ 184 (422)
.++. |. . ...+.+..+ .++++.+.+.+..-..-...|+.. .++-+...++...+..++.+++ +
T Consensus 379 -~~~~---p~--~---~~~~~l~~~---~~~fG~~~g~~~~l~~~i~~~~~g-~~~l~~a~Gl~l~~~gi~~l~g----p 441 (509)
T KOG2504|consen 379 -RLFL---PF--A---TTYVGLIVF---SILFGFCVGSFSSLTPVILVDLVG-LEKLSNAYGLLLLFQGIGALVG----P 441 (509)
T ss_pred -HHHH---HH--h---ccHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHcC-hhhcchHHHHHHHHhHHHHHcC----c
Confidence 2342 31 1 112222222 345666665544433345556553 4556777777777777766655 4
Q ss_pred HHHhhccCCCCCchHHHHHHHHHHHHHHHHHHHh
Q 014600 185 IVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVG 218 (422)
Q Consensus 185 ~l~~~~~~~g~~~~~~~~~~~~~i~~~i~~i~~~ 218 (422)
|+.+.+- |....|...++..++..++...
T Consensus 442 Piag~~~-----d~tg~Y~~~f~~~g~~~~~s~~ 470 (509)
T KOG2504|consen 442 PIAGLLY-----DITGNYDHAFYFCGLCFLLSAV 470 (509)
T ss_pred ccceeee-----eccCCeeeehhhcChHHHHHHH
Confidence 5555432 1122366666666555554443
No 222
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=97.46 E-value=0.005 Score=57.28 Aligned_cols=117 Identities=19% Similarity=0.213 Sum_probs=74.4
Q ss_pred hCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCccchhhhHHHHHHH
Q 014600 54 IGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFA 133 (422)
Q Consensus 54 ~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~~~~~~~~~~~~ 133 (422)
.|+|..+...+-....+...+ ..+.|.+.||+|.|.. +++|++...+++.++|. ++- +-.+.. ..|....+.
T Consensus 32 l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~-l~iG~~~~~~GY~~~~l-~~~-~~i~~~-~~~~~~~~~--- 103 (250)
T PF06813_consen 32 LGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVV-LLIGAVLGFVGYGLLWL-AVS-GRIPSL-PVWLMCLFL--- 103 (250)
T ss_pred hCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHH-HHHHHHHHHHHHHHHHH-HHh-CccCcc-chHHHHHHH---
Confidence 399999999998888888876 5888999999998766 67899999999988875 111 111111 222212121
Q ss_pred HHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHH
Q 014600 134 AIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLY 180 (422)
Q Consensus 134 ~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~ 180 (422)
.+.+.+-+.+++.. +...+..=|++|+++.++--.+.++++.+-.
T Consensus 104 ~l~~~s~~~~~ta~--lvt~~~NFP~~RG~vvgilk~~~GLSaai~t 148 (250)
T PF06813_consen 104 FLGGNSSCWFNTAS--LVTCVRNFPRSRGTVVGILKGFFGLSAAIFT 148 (250)
T ss_pred HHHcccHHHhhhHH--HHHHHHhCccccCceehhhhHHHHhHHHHHH
Confidence 12333333333332 2222222267899999998877777765544
No 223
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.17 E-value=0.00036 Score=71.42 Aligned_cols=85 Identities=16% Similarity=0.137 Sum_probs=70.1
Q ss_pred eeeeeeeccchhHHHHHHHHHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcc----cCCchhHHHHHHH
Q 014600 24 WSVLYYGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDR----FGHFKIWHGAGSV 98 (422)
Q Consensus 24 ~~~~~y~~g~~~~~~~~~~~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr----~Grrrp~ll~g~i 98 (422)
...+.|++..+...+..+....++|.|+++. |.|..++..+....-+.+++..++.|+++|| +.+|-.+.....+
T Consensus 273 p~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~ 352 (495)
T KOG2533|consen 273 PGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCL 352 (495)
T ss_pred hhHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 4567788888899998888899999999996 8999999999999999999999999999999 6666665555566
Q ss_pred HHHHHHHHhh
Q 014600 99 LVAVSFSSVF 108 (422)
Q Consensus 99 ~~~i~~~~lf 108 (422)
...++...+.
T Consensus 353 ~~~~g~~~l~ 362 (495)
T KOG2533|consen 353 YAIIGAISLL 362 (495)
T ss_pred HHHHHHHHHH
Confidence 6666644444
No 224
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=97.16 E-value=0.014 Score=59.84 Aligned_cols=133 Identities=11% Similarity=-0.060 Sum_probs=85.4
Q ss_pred HHHHHHHHHHh-CCChh----HHHHHHHHHHHHhhhhhhhhhhhhcccCCc----hhHH--HHHHHHHHHHHHHhhcCcc
Q 014600 44 FTYLLLFLTDI-GLSPR----GAAAVMLSGQIADGFATIFIGELIDRFGHF----KIWH--GAGSVLVAVSFSSVFGGCM 112 (422)
Q Consensus 44 ~~~l~~f~t~~-gls~~----~~g~i~~i~~l~~ai~~p~~G~lsDr~Grr----rp~l--l~g~i~~~i~~~~lf~~~~ 112 (422)
.+.++.|..+. +.+.. ..+++.++..++-.+..|+..++-.|.+|| ++.. .+|.++.++++..+..
T Consensus 292 ~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~--- 368 (475)
T TIGR00924 292 PTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAA--- 368 (475)
T ss_pred hhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHH---
Confidence 34456666553 33322 277888889999899999877543333322 3333 5677777777654421
Q ss_pred CccccC---CccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHH
Q 014600 113 PCRILS---TSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAF 184 (422)
Q Consensus 113 p~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~ 184 (422)
...... ..+.+|..+.+ ++.+++..+......++..+.++ ++.|++..+.......+|..+++.+..
T Consensus 369 ~~~~~~~~~~~s~~~~i~~~----~~~~~ge~~~~p~~~~~~~~~aP-~~~~g~~~g~~~l~~~~g~~l~~~~~~ 438 (475)
T TIGR00924 369 SIWFADAGGLTSPWFMVLIY----LFQTLGELMISPLGLSWWTKIAP-QRLMGQMLGMWFLAQAMGSLLGGYLAT 438 (475)
T ss_pred HHhhcCCCCccCHHHHHHHH----HHHHHHHHHHhHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000000 12333333333 46888888999999999999986 678999999999888888888776554
No 225
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=97.15 E-value=0.00067 Score=68.50 Aligned_cols=67 Identities=16% Similarity=0.224 Sum_probs=56.6
Q ss_pred HHHHHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhh
Q 014600 42 CWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVF 108 (422)
Q Consensus 42 ~~~~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf 108 (422)
...++++.|..+.|++++++|++.....++..+..|++|++.||+-||||.++.+.+......+++.
T Consensus 29 ~l~pll~vy~kQLGl~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~r~~r~lllgsl~~~v~a~fll~ 95 (618)
T KOG3762|consen 29 SLFPLLAVYFKQLGLNPAVVGTLTGTLPLVEFLAAPLWGFLADRYRKRRPLLLGSLLLSVTATFLLV 95 (618)
T ss_pred ccchHHHHHHHHcCCCHHHhhhhhhHHHHHHHHhHHHHHHHHHHHHhcCchhHHHHHHHHHHHHhee
Confidence 4557888999999999999999999999999999999999999999999977666555555554443
No 226
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=97.12 E-value=0.0084 Score=60.27 Aligned_cols=139 Identities=10% Similarity=0.073 Sum_probs=70.9
Q ss_pred HHHHHHHHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCcc
Q 014600 37 DITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCR 115 (422)
Q Consensus 37 ~~~~~~~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~ 115 (422)
.........+.|.++.+. |.++.+.|+..........+...+.+++.+|.+++|... .+.....++..++... . .
T Consensus 231 ~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~-~~~~~~~ig~~l~~~~--~-~ 306 (413)
T PRK15403 231 YIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIW-RAVPIQLVGLALLIVG--N-L 306 (413)
T ss_pred HHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHH-HHHHHHHHHHHHHHHH--H-H
Confidence 333334445678888888 999999999887676676777888888776555544421 1222222222221100 0 0
Q ss_pred ccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 014600 116 ILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIV 186 (422)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l 186 (422)
+.+ +.++. ..+...+++.+.+....+..+.. +.+++.++++.++..+.....+..+++..+..+
T Consensus 307 ~~~--~~~~~---~~~~~~l~~~G~~~~~p~~~~~a--l~~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~ 370 (413)
T PRK15403 307 LWP--HVWLW---SVLGTSLYAFGIGLIFPTLFRFT--LFSNNLPKGTVSASLNMVILMVMAVSVEIGRWL 370 (413)
T ss_pred Hcc--ccHHH---HHHHHHHHHHHHHHHhHHHHHHH--hccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 001 11111 11122345555555544444211 223344577777766665555555555444433
No 227
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=97.05 E-value=0.053 Score=50.14 Aligned_cols=152 Identities=13% Similarity=0.057 Sum_probs=87.2
Q ss_pred HHHHHHHHHHHHhCCCh--hHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCC
Q 014600 42 CWFTYLLLFLTDIGLSP--RGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILST 119 (422)
Q Consensus 42 ~~~~~l~~f~t~~gls~--~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~ 119 (422)
......+.+..+.+.+. ...+.+.....+...+..++.|+++||+|||+.. ..+.....++...... .++
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~-~~~~~~~~~~~~~~~~-------~~~ 91 (338)
T COG0477 20 LLSPALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVL-IIGLLLFLLGTLLLAL-------APN 91 (338)
T ss_pred hHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHH-HHHHHHHHHHHHHHHh-------Ccc
Confidence 33345555566654444 5788899999998888889999999999998664 3444333333222211 111
Q ss_pred ccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHH-HHHHHHHHHHHHHHHHHhhccCCCCCch
Q 014600 120 STLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNA-FTMVANLSLYAIAFIVFSVSTAKTHADL 198 (422)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~-~~~ig~~l~~~~~~~l~~~~~~~g~~~~ 198 (422)
... ..+.+.....+++.+.......++.++..++.++|+...+.... ...+|.++++.+...+... .
T Consensus 92 -~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~ 159 (338)
T COG0477 92 -VGL---ALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA--------L 159 (338)
T ss_pred -chH---HHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------H
Confidence 111 12222223356666777777888888886530367777776655 3555555555443333221 1
Q ss_pred HHHHHHHHHHHHHHH
Q 014600 199 ENQYRWIAYSSIFIG 213 (422)
Q Consensus 199 ~~~~~~~~~i~~~i~ 213 (422)
..+|++.+.+.....
T Consensus 160 ~~~~~~~~~~~~~~~ 174 (338)
T COG0477 160 LWGWRAAFLLAALLG 174 (338)
T ss_pred hcchHHHHHHHHHHH
Confidence 236777554444433
No 228
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=97.03 E-value=0.015 Score=56.59 Aligned_cols=168 Identities=16% Similarity=0.100 Sum_probs=95.7
Q ss_pred chhHHHHHHHHHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCc
Q 014600 33 HMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGC 111 (422)
Q Consensus 33 ~~~~~~~~~~~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~ 111 (422)
++..+.+..+..+.+.+-...+ |++..+..++...-..-..+..-.+|.++||+||||-+.+-. ....+.-+.
T Consensus 86 gwmad~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~-l~t~v~~~i----- 159 (528)
T KOG0253|consen 86 GWMADAMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTF-LVTGVFGVI----- 159 (528)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhH-HHHHHHHHh-----
Confidence 3444555555556666666667 988888888888887777888889999999999998865322 222211111
Q ss_pred cCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 014600 112 MPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVST 191 (422)
Q Consensus 112 ~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~ 191 (422)
.+.+|+ ..+..+. ..+.+.+.+. ..--.++-.|-.+. .+|....-.. .+..+|.+....+....+..
T Consensus 160 --s~~spn--f~~L~~f----~~l~~~g~gg-~pv~~~~yle~lp~-~~r~~~~V~~-~~waig~v~ea~law~vm~~-- 226 (528)
T KOG0253|consen 160 --SGASPN--FASLCVF----RALWGFGVGG-LPVDSAIYLEFLPS-SHRWLLTVMS-FFWAIGQVFEALLAWGVMSN-- 226 (528)
T ss_pred --hcCCCC--eehhhHH----HHHHhccCCC-ccHhHHHHHHhccC-cCCCcchhHH-HHHHHHHHHHHHHHHHHHHh--
Confidence 012222 2222222 2345555544 22223445555553 4566554444 66777887777666555542
Q ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHhhhhccccCcc
Q 014600 192 AKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPR 228 (422)
Q Consensus 192 ~~g~~~~~~~~~~~~~i~~~i~~i~~~i~~~~~~E~~ 228 (422)
.||||.....+....+.. ..+++++|.+
T Consensus 227 --------~gwr~~l~~~~~pl~~~a-~f~~w~~ESp 254 (528)
T KOG0253|consen 227 --------FGWRYLLFTSSTPLMFAA-RFLVWVYESP 254 (528)
T ss_pred --------hhHHHHHHHHHhHHHHHH-HHHhhcccCc
Confidence 377776555544333332 3345677753
No 229
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=96.71 E-value=0.05 Score=54.66 Aligned_cols=138 Identities=6% Similarity=-0.038 Sum_probs=75.2
Q ss_pred chhHHHHHHHHHHHHHHHHHHh--CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcC
Q 014600 33 HMLNDITAACWFTYLLLFLTDI--GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGG 110 (422)
Q Consensus 33 ~~~~~~~~~~~~~~l~~f~t~~--gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~ 110 (422)
.+..........+|++.|..+. +.+....+...........+...+.|++.||.++||. +.......++...+...
T Consensus 241 ~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~-l~i~~~~~~~~~ll~~~- 318 (410)
T TIGR00885 241 QFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKV-LMAYAIIGMALCLGSIF- 318 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHH-HHHHHHHHHHHHHHHHH-
Confidence 3333333334557888888775 5666666666666667778888999999999999887 44445555544433321
Q ss_pred ccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 014600 111 CMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFS 188 (422)
Q Consensus 111 ~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~ 188 (422)
.++ .. ....+ .+.+.+.+.......++..+.. .+|.+..+.......+|+.+.+.+.+.+.+
T Consensus 319 ------~~~--~~-~~~~l----~~~glf~s~~fp~i~sl~~~~~---g~~~~~~s~~l~~~~~Gga~~p~l~G~~~d 380 (410)
T TIGR00885 319 ------AGG--HV-GLYCL----TLCSAFMSLMFPTIYGIALKGL---GQDTKYGAAGLVMAIIGGGIVPPLQGFIID 380 (410)
T ss_pred ------cCC--hH-HHHHH----HHHHHHHHHHHHHHHHHHHhhh---hhhhhhhHHHHHHHHhccchHHHHHHHHHH
Confidence 111 11 11111 2344555544444555555543 234443333333444666666555544443
No 230
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=96.70 E-value=0.07 Score=54.62 Aligned_cols=156 Identities=10% Similarity=-0.032 Sum_probs=84.9
Q ss_pred HHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhc-CccCccccCC-------ccchhhhHHHHHHHHHH
Q 014600 65 MLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFG-GCMPCRILST-------STLKVETISYCVFAAIF 136 (422)
Q Consensus 65 ~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~-~~~p~~~~~~-------~~~~~~~~~~~~~~~l~ 136 (422)
+....+...+.+.+.-.+.+|+|+||.+...+-++.++++...+. ..++.+..+. ..........++...+.
T Consensus 311 l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 390 (477)
T TIGR01301 311 LMLNSVVLGITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAIL 390 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHh
Confidence 444444445555666777889996444444566666666554431 0000000000 00000001112222467
Q ss_pred HHHHH-HHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchHHHHHHHHHHHHHHHHH
Q 014600 137 NVGWA-ATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCC 215 (422)
Q Consensus 137 ~~~~~-~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~~~~~~~~~~~~i~~~i~~i 215 (422)
++.|+ ...+||.-+..+..++.++.+...++-+.+..+.+++.+...+++...+++ + -.+.+.+-++.+++
T Consensus 391 Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~----~----~~~~~~~~gv~~~~ 462 (477)
T TIGR01301 391 GIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGG----G----NLPAFVVGAVAAFV 462 (477)
T ss_pred hHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCC----C----CeeHHHHHHHHHHH
Confidence 88887 556887544444332234458889999999999999988777776665531 1 13344455566666
Q ss_pred HHhhhhccccCcc
Q 014600 216 FVGIFLSRTEEPR 228 (422)
Q Consensus 216 ~~~i~~~~~~E~~ 228 (422)
..+.+.+..|.++
T Consensus 463 aa~~~~~~~~~~~ 475 (477)
T TIGR01301 463 SGLLALILLPRPR 475 (477)
T ss_pred HHHHHHHhCCCCC
Confidence 6666676666643
No 231
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=96.68 E-value=0.054 Score=55.98 Aligned_cols=114 Identities=13% Similarity=0.070 Sum_probs=74.1
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhcccCCc----hhHHHHHHHHHHHHHHHhhcCccCccccC-C--ccchhhhHHHHHHH
Q 014600 61 AAAVMLSGQIADGFATIFIGELIDRFGHF----KIWHGAGSVLVAVSFSSVFGGCMPCRILS-T--STLKVETISYCVFA 133 (422)
Q Consensus 61 ~g~i~~i~~l~~ai~~p~~G~lsDr~Grr----rp~ll~g~i~~~i~~~~lf~~~~p~~~~~-~--~~~~~~~~~~~~~~ 133 (422)
.+++..+..++-.+..|+.+++-+|.+|| +. +.+|.++.++++..+... + .... + .+.+|....|
T Consensus 318 ~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~-~~~G~~l~~l~f~~l~~~--~-~~~~~~~~vs~~~~~~~~---- 389 (500)
T PRK09584 318 PEQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHK-FAIGMVLCSGAFLVLPLG--A-KFANDAGIVSVNWLIASY---- 389 (500)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHH-HHHHHHHHHHHHHHHHHH--H-HhcCCCCccCHHHHHHHH----
Confidence 56667777777778888886665555544 33 456778888887654320 1 1000 0 1122232223
Q ss_pred HHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHH
Q 014600 134 AIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIA 183 (422)
Q Consensus 134 ~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~ 183 (422)
.+.+++..+......++..+..| ++.|++..+.......+|+.+++.+.
T Consensus 390 ~l~~~ge~~~~p~g~s~~~~~aP-~~~rg~~~g~~~l~~a~g~~~~g~~~ 438 (500)
T PRK09584 390 GLQSIGELMISGLGLAMVAQLVP-QRLMGFIMGSWFLTTAGAALIAGYVA 438 (500)
T ss_pred HHHHHHHHHHhHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46788888888888999999886 68899999988777777776665544
No 232
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=96.57 E-value=0.0084 Score=62.14 Aligned_cols=168 Identities=13% Similarity=-0.015 Sum_probs=83.8
Q ss_pred HHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCcc-ch
Q 014600 45 TYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTST-LK 123 (422)
Q Consensus 45 ~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~-~~ 123 (422)
.|.+.++.+.|.+... .....+..+...+..-+.+++.||+|||+. ++.+...+.++..++-. ... ...... ..
T Consensus 316 ~Y~~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~l-ll~s~~~m~~~~~~~~~--~~~-~~~~~~~~~ 390 (513)
T KOG0254|consen 316 YYSTTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKL-LLFGAAGMSICLVILAV--VGV-FALYYPNSS 390 (513)
T ss_pred eehHHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHH-HHHhHHHHHHHHHHHHH--HHH-HhccCCCcc
Confidence 3555555555554321 222333333444444455899999999877 66788888887665431 110 010000 00
Q ss_pred hhhHHHHH-HHHHHHHHHHHHHhhhh-hhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchHHH
Q 014600 124 VETISYCV-FAAIFNVGWAATQVAHM-SMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQ 201 (422)
Q Consensus 124 ~~~~~~~~-~~~l~~~~~~~~~~p~~-al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~~~~~~ 201 (422)
....+..+ ..+++-..++....|.. .+.+|+.+ .+-|++..++......+.+.+............ +
T Consensus 391 ~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp-~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~----------~ 459 (513)
T KOG0254|consen 391 KGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFP-LRLRSKGASLAVAVNWLWNFLISFFFPFITEAL----------G 459 (513)
T ss_pred cchhHHHHHHHHHHHHHHhcccccchhhhhhccCc-HhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhc----------c
Confidence 00011111 11234344443333332 45677776 577888888877777766655543333332211 1
Q ss_pred HHHHHHHHHHHHHHHHh-hhhccccCcc
Q 014600 202 YRWIAYSSIFIGCCFVG-IFLSRTEEPR 228 (422)
Q Consensus 202 ~~~~~~i~~~i~~i~~~-i~~~~~~E~~ 228 (422)
....+..++.++.+... ..++.++|.+
T Consensus 460 ~~~~f~~f~~~~~~~~~~fv~~~~pETk 487 (513)
T KOG0254|consen 460 IGGTFGYFGGICLLSLIIFVFFFVPETK 487 (513)
T ss_pred ccchHHHHHHHHHHHHHHHheEEcccCC
Confidence 12233334444444444 5677888865
No 233
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=96.46 E-value=1.1 Score=44.72 Aligned_cols=128 Identities=13% Similarity=0.055 Sum_probs=77.3
Q ss_pred HHHHHHHHHh--CCChhHHH-HHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCcc
Q 014600 45 TYLLLFLTDI--GLSPRGAA-AVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTST 121 (422)
Q Consensus 45 ~~l~~f~t~~--gls~~~~g-~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~ 121 (422)
+|+..|+++. |++..++- -+.=+..=.....-.++..+.|..|- ||.++.+++...+...++-+ . .+
T Consensus 24 Pfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Y-kpviil~~~~~i~t~~lll~-------~--~s 93 (412)
T PF01770_consen 24 PFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRY-KPVIILQALSYIITWLLLLF-------G--TS 93 (412)
T ss_pred ccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHHHHHHH-------H--Cc
Confidence 6888888875 78776654 22222222233345577888897754 67777777776666554432 1 12
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 014600 122 LKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFS 188 (422)
Q Consensus 122 ~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~ 188 (422)
..+ .-+.-+.+++. +...+.|.+.+-...+ +++--++.++......+|..+++.++..++.
T Consensus 94 v~~----mq~~q~~yg~~-~a~evay~sYiys~v~-~~~yq~vts~~raa~l~g~~~s~~lgQllvs 154 (412)
T PF01770_consen 94 VLA----MQLMQFFYGLA-TAAEVAYYSYIYSVVD-KEHYQKVTSYTRAATLVGRFISSLLGQLLVS 154 (412)
T ss_pred HHH----HHHHHHHHHHH-HHHHHHHHHHheeecC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 221 12112234443 3457788888877664 5555677877777778888888877765554
No 234
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=96.34 E-value=0.28 Score=48.60 Aligned_cols=160 Identities=12% Similarity=0.048 Sum_probs=97.8
Q ss_pred HHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcc-cCCchhHHHHHHHHHHHHHHHhhcCccCccccCCccchhhh
Q 014600 49 LFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDR-FGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVET 126 (422)
Q Consensus 49 ~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr-~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~~~~~ 126 (422)
+|--++ |+++.+...+...-..-..+.-...|++..| .+++| +-.+|+...++++.++-. +-| ..+.+ .
T Consensus 233 Pygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~-~a~~G~~~~~~~f~lii~-a~~-----~~~~~-~- 303 (403)
T PF03209_consen 233 PYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKR-TAALGCLLGALAFALIIL-AGP-----LGSPW-L- 303 (403)
T ss_pred CchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchH-HHHHHHHHHHHHHHHHHH-HHh-----cccch-H-
Confidence 445566 8998887777666666656666677888885 55554 577888888888766542 111 11222 1
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchHHHHHHHH
Q 014600 127 ISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIA 206 (422)
Q Consensus 127 ~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~~~~~~~~~~~ 206 (422)
+.....+++++.+.+.+...+++.+++.+ ++.+...+.......++.-++..+++.+.+........+...+|..++
T Consensus 304 --~~~~~~l~G~g~G~f~vgals~mM~lt~~-~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF 380 (403)
T PF03209_consen 304 --FRPGVFLLGLGNGLFTVGALSLMMDLTSA-GRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVF 380 (403)
T ss_pred --HHHHHHHHHHhhhHHHHHHHHHHHhCCCC-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHH
Confidence 11122468899999999999999999864 344544554445555555555555555555321111113567888888
Q ss_pred HHHHHHHHHHHhhh
Q 014600 207 YSSIFIGCCFVGIF 220 (422)
Q Consensus 207 ~i~~~i~~i~~~i~ 220 (422)
.+=+++.+++.++.
T Consensus 381 ~lEa~ll~~a~~ll 394 (403)
T PF03209_consen 381 ALEAVLLLAALVLL 394 (403)
T ss_pred HHHHHHHHHHHHHH
Confidence 77666555555443
No 235
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=96.32 E-value=3.5e-05 Score=78.14 Aligned_cols=166 Identities=14% Similarity=-0.003 Sum_probs=88.2
Q ss_pred HHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCccchhh
Q 014600 46 YLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVE 125 (422)
Q Consensus 46 ~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~~~~ 125 (422)
|.+..+.+.|.+.. -....+..++..+...+...++||+|||+. ++.+....+++...+.. +.....+.+.++.
T Consensus 275 ~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~-~i~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 348 (451)
T PF00083_consen 275 YSPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKL-LIIGLLLMAICSLILGI---IFFLGVSSSSWWS 348 (451)
T ss_pred cccccccccccccc--cccccccccccccccccccccccccccccc-ccccccccccccccccc---ccccccccccccc
Confidence 33444444466655 112233345556667777899999999877 44666666665443310 0001111110001
Q ss_pred hHHHHHHHHHHHHHHH-HHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchHHHHHH
Q 014600 126 TISYCVFAAIFNVGWA-ATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRW 204 (422)
Q Consensus 126 ~~~~~~~~~l~~~~~~-~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~~~~~~~~~ 204 (422)
.. .+.+..++...++ ........+.+|+.+ .+.|.+..++....+.+++.+.+.+.+.+.+.. +-..
T Consensus 349 ~~-~i~~~~l~~~~~~~g~~~~~~~~~~ElfP-t~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~----------~~~~ 416 (451)
T PF00083_consen 349 IL-SIVFLALFFAFFSLGWGPLPWIYTAELFP-TKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNL----------GGWG 416 (451)
T ss_pred cc-cceeeeecccccccccccccccccccccc-ccccccccccccccccccccccccccccccccc----------cccc
Confidence 01 1111112323333 233344578899987 578998888877777777766554433332211 1122
Q ss_pred HHHHHHHHHHHHHhhhhccccCccc
Q 014600 205 IAYSSIFIGCCFVGIFLSRTEEPRL 229 (422)
Q Consensus 205 ~~~i~~~i~~i~~~i~~~~~~E~~~ 229 (422)
.+.+.+.++++..+++++++||.+.
T Consensus 417 ~~~i~~~~~~i~~i~~~~~lpET~g 441 (451)
T PF00083_consen 417 VFLIFAGVCLIAIIFVYFFLPETKG 441 (451)
T ss_pred cchhhHHHHHHHHhheeEEEeeCCC
Confidence 3445556666777778899999753
No 236
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=95.96 E-value=0.52 Score=47.88 Aligned_cols=43 Identities=7% Similarity=0.036 Sum_probs=30.5
Q ss_pred HHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHH
Q 014600 139 GWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAI 182 (422)
Q Consensus 139 ~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~ 182 (422)
..+-.+++...+.-.+-. ++.++.+++...++.+.|..++..+
T Consensus 131 l~ATQDIAVDGWALT~Ls-~~n~~~ASTcqtvG~~~Gyfls~tv 173 (544)
T PF13000_consen 131 LCATQDIAVDGWALTMLS-PENVGYASTCQTVGQTAGYFLSFTV 173 (544)
T ss_pred HHccCCceeehhhhhhcC-hhhcchHHHHHHhHhhhhHHHHHHH
Confidence 344566777666666653 6778889998888888888776644
No 237
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=95.67 E-value=0.022 Score=55.86 Aligned_cols=158 Identities=11% Similarity=0.108 Sum_probs=88.5
Q ss_pred HHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCccc
Q 014600 44 FTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTL 122 (422)
Q Consensus 44 ~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~ 122 (422)
-+-++.+..|. ..+..++|+.+.-+.+..++..++.|.+.||++..| |+....-+..++. .+. ++| +..+
T Consensus 290 ePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~-wl~~~~gl~~~G~-~~~--~iP--~~~~--- 360 (464)
T KOG3764|consen 290 EPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLR-WLLSLGGLATVGV-SSG--PIP--FATS--- 360 (464)
T ss_pred CcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhcCchh-HHHHHHHHHHHHH-Hhc--hhH--hhhh---
Confidence 34456677776 766669999999999999999999999999999766 6654333333332 222 234 1211
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCcc-----chhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCc
Q 014600 123 KVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNST-----SRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHAD 197 (422)
Q Consensus 123 ~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~-----eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~~ 197 (422)
+.. ++-- .+..+++-...+..+......+.+..+ --+.+.++......+|..+++.+++.+.
T Consensus 361 ~~~-L~vp--~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv---------- 427 (464)
T KOG3764|consen 361 IAQ-LWVP--NFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLV---------- 427 (464)
T ss_pred HHH-Hhhh--hHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchhe----------
Confidence 111 1111 111222222333333333333332212 2244555555555555555554443332
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhcc
Q 014600 198 LENQYRWIAYSSIFIGCCFVGIFLSR 223 (422)
Q Consensus 198 ~~~~~~~~~~i~~~i~~i~~~i~~~~ 223 (422)
...||.|...++++..++..-++.+.
T Consensus 428 ~~iGF~wl~~iig~~n~iyapvl~ll 453 (464)
T KOG3764|consen 428 EAIGFEWLMTIIGILNLIYAPVLLLL 453 (464)
T ss_pred eehhHHHHHHHHHHHHHHHHHHHHHH
Confidence 34689999888888877766665443
No 238
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=95.63 E-value=0.045 Score=53.33 Aligned_cols=135 Identities=9% Similarity=-0.031 Sum_probs=78.4
Q ss_pred HHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCccchhhhHHHHHHHHHHHHHHHHHHh
Q 014600 66 LSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQV 145 (422)
Q Consensus 66 ~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 145 (422)
.+..+...=+..+.|++.||+|||+. |-...+++++..++++. |. .++ .+. +.. +....+-+....
T Consensus 388 litslaefPGlLIt~~iverlGRKkT-Mal~l~~f~iflfll~~-c~----~rn---~~t-vll----f~arafisg~fq 453 (528)
T KOG0253|consen 388 LITSLAEFPGLLITGVIVERLGRKKT-MALSLILFGIFLFLLTT-CK----TRN---AYT-VLL----FTARAFISGAFQ 453 (528)
T ss_pred HHHHHhhCCchhHHHHHHHHhcchhH-HHHHHHHHHHHHHHHHH-hc----Ccc---hhH-HHH----HHHHHHHhchhe
Confidence 44555555566789999999999999 66777888887777664 21 111 111 111 122222232222
Q ss_pred hhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchHHHHHHHHHHHHHHHHHHHhhhhcccc
Q 014600 146 AHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTE 225 (422)
Q Consensus 146 p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~~~~~~~~~~~~i~~~i~~i~~~i~~~~~~ 225 (422)
..+.+.||..+ ..-|+...+......-+|+++.+.+. +..-. .-.....+.+..+++..+..+++--
T Consensus 454 vaYvYtPEVyP-TavRatgvGtcSsmaRIggI~~p~iA--~~~e~----------s~sl~i~vy~~~~ilagIavcffPi 520 (528)
T KOG0253|consen 454 VAYVYTPEVYP-TAVRATGVGTCSSMARIGGIFSPVIA--MRAEL----------STSLPIFVYGALFILAGIAVCFFPI 520 (528)
T ss_pred EEEEecCcccc-hhhhhcchhhhhhHHhhhhhhhhHHH--HHhcc----------ceeehHHHHHHHHHHHHHHheeeee
Confidence 33567888876 46788777777777788888877654 21110 1112334455666666666666644
Q ss_pred Cc
Q 014600 226 EP 227 (422)
Q Consensus 226 E~ 227 (422)
|+
T Consensus 521 Et 522 (528)
T KOG0253|consen 521 ET 522 (528)
T ss_pred cc
Confidence 43
No 239
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=95.10 E-value=4.7 Score=41.47 Aligned_cols=122 Identities=11% Similarity=0.077 Sum_probs=65.9
Q ss_pred hhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHh-hccCCCCCc--hHHHHHHHHHHHHHHHHHHHhhhhc
Q 014600 146 AHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFS-VSTAKTHAD--LENQYRWIAYSSIFIGCCFVGIFLS 222 (422)
Q Consensus 146 p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~-~~~~~g~~~--~~~~~~~~~~i~~~i~~i~~~i~~~ 222 (422)
-++++.+|.++ .+|-.|....-..++++|.++++.+...+.. .......+. +.......+.+..+.+++...+. .
T Consensus 164 LFW~fAN~itt-~~eAKRfYpl~g~ganigli~sG~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~v~~~g~~i~~~~-~ 241 (491)
T PF03219_consen 164 LFWGFANEITT-VEEAKRFYPLFGLGANIGLIFSGQLTSYFSSFLRKSLPAGVDAWELSLNSLMGIVLILGIVIILLY-R 241 (491)
T ss_pred HHHHHHHhcCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccHhHHHHHHHHHHHHHHHHHHHHH-H
Confidence 46899999886 6788888888888999998887766655544 111110011 11112222222223333322222 2
Q ss_pred cccC-----ccc------ccccCCCcchhhhHHHHHHhHHHHHHHHHHHHHHHHHHhh
Q 014600 223 RTEE-----PRL------KMGLRGNSHARISWAYWFKKILYYQVALVYMLTRLVVNVS 269 (422)
Q Consensus 223 ~~~E-----~~~------~~~~~~~~~~~~~~~~~~~n~~f~~~~~~~~~~~~~~~~~ 269 (422)
...+ +.. +++++++.+.+++++.++|+|....+.+.-++.+...+.+
T Consensus 242 ~~~~~vl~~~~~~~~~~~~kk~k~k~s~~es~k~l~kS~yL~~Ia~lvi~Ygi~inLv 299 (491)
T PF03219_consen 242 YMNKNVLTDPRFYPSAKKKKKKKPKMSLKESFKLLLKSKYLLCIALLVIAYGISINLV 299 (491)
T ss_pred HHHHHccCccccchhhhcccccCCCccHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 2221 111 1111334567789999999998776655555555544433
No 240
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=94.74 E-value=5.4 Score=40.35 Aligned_cols=51 Identities=24% Similarity=0.269 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHHHHh-C---CChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchh
Q 014600 38 ITAACWFTYLLLFLTDI-G---LSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKI 91 (422)
Q Consensus 38 ~~~~~~~~~l~~f~t~~-g---ls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp 91 (422)
...-++..-.+.|+.+. . +.++..|+.. .+...+..|.+|.+.||.-|.|.
T Consensus 16 w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~---~~~~~~f~~~vG~~iD~~~Rl~~ 70 (432)
T PF06963_consen 16 WGDRMWEFAVPLFLISIFPGSLLPVSIYGLVR---SLSAILFGPWVGRWIDRSPRLKV 70 (432)
T ss_pred HHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHH---HHHHHHhhHHHHHHHhCCcchhh
Confidence 33344555567777776 3 2344445444 44455688999999999877665
No 241
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=94.20 E-value=0.089 Score=56.03 Aligned_cols=75 Identities=17% Similarity=0.217 Sum_probs=54.0
Q ss_pred eeccchhHHHHHHHHHHHHHHHHHHh-CCChhHHHHHHHHHHH-HhhhhhhhhhhhhcccCCc-hhHHHHHHHHHHHH
Q 014600 29 YGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQI-ADGFATIFIGELIDRFGHF-KIWHGAGSVLVAVS 103 (422)
Q Consensus 29 y~~g~~~~~~~~~~~~~~l~~f~t~~-gls~~~~g~i~~i~~l-~~ai~~p~~G~lsDr~Grr-rp~ll~g~i~~~i~ 103 (422)
..+..+..........+|+|.|+.+. |+++.++|++..+..+ ..++..++.|+++||++++ |..+.++.+...++
T Consensus 335 ~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~~~~~ 412 (633)
T TIGR00805 335 VILAQVIDSLAFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFAICLSTLS 412 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeecccHHHHHHHHHHHHHHH
Confidence 44444444555556668999999987 9999999999987766 4578899999999999843 44444454444444
No 242
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=94.20 E-value=2.1 Score=36.76 Aligned_cols=100 Identities=15% Similarity=0.064 Sum_probs=64.4
Q ss_pred HHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhh
Q 014600 69 QIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHM 148 (422)
Q Consensus 69 ~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~ 148 (422)
-..-++..++...+.+|.|.|+. +++|.+...+-....+. | + . ..+....++.+++.+...++..
T Consensus 47 Y~~~~~s~l~~P~iv~~lg~K~s-m~lg~~~y~~y~~~~~~---~-----~---~---~~l~~~s~l~G~~~a~lW~aqg 111 (156)
T PF05978_consen 47 YGSFAISCLFAPSIVNKLGPKWS-MILGSLGYAIYIASFFY---P-----N---S---YTLYPASALLGFGAALLWTAQG 111 (156)
T ss_pred HHHHHHHHHhHHHHHHHHhhHHH-HHHHHHHHHHHHHHHHh---h-----h---H---HHHHHHHHHHhhhhHHhhHhhh
Confidence 33344555666777889999877 66777776654333232 2 1 1 1122233578899999999999
Q ss_pred hhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHH
Q 014600 149 SMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAF 184 (422)
Q Consensus 149 al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~ 184 (422)
..+.+..+ +++|++-.++.......+.++++++..
T Consensus 112 ~ylt~~s~-~~~~~~~~~ifw~i~~~s~i~G~~~~~ 146 (156)
T PF05978_consen 112 TYLTSYST-EETIGRNTGIFWAIFQSSLIFGNLFLF 146 (156)
T ss_pred HHHHHcCC-HHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 98888764 677888777766666666666665543
No 243
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=93.50 E-value=0.62 Score=47.75 Aligned_cols=149 Identities=15% Similarity=0.074 Sum_probs=88.7
Q ss_pred eeeeccchhHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHH
Q 014600 27 LYYGSGHMLNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSS 106 (422)
Q Consensus 27 ~~y~~g~~~~~~~~~~~~~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~ 106 (422)
+.+.+-.+..+....++.+|+--++.|.|-.+...|..-.+.-.-....-++.+++..|.|+-|. +..|.....+=+..
T Consensus 374 llff~~av~mG~g~~lv~tFLfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v-~~lgLa~~~~Rf~~ 452 (618)
T KOG3762|consen 374 LLFFFVAVVMGAGVGLVFTFLFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNV-MYLGLACNVGRFLY 452 (618)
T ss_pred EehhHHHHHHHHHHHHHHHHHHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccce-eeehhhHHHHHHHH
Confidence 33444444445555666677655566667777777766666666666677889999999999887 43454444443322
Q ss_pred hhcCccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHH-HHHHHHHHHHHHHHHHHH
Q 014600 107 VFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSC-RNAFTMVANLSLYAIAFI 185 (422)
Q Consensus 107 lf~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~-~~~~~~ig~~l~~~~~~~ 185 (422)
+= . .. +.|.. + -+-++.++.++.+.....+.++...+ |+-|..+.+. +..+-++|--+++++++.
T Consensus 453 ~S---~----L~--n~W~v-L---Pieilqgit~aliWaa~~sY~s~vaP-p~l~at~Q~l~~g~f~GlG~g~GslIGG~ 518 (618)
T KOG3762|consen 453 YS---Y----LQ--NPWMV-L---PIEILQGITHALIWAAIISYASHVAP-PGLRATAQGLLQGIFHGLGKGLGSLIGGF 518 (618)
T ss_pred HH---H----hc--Cchhe-e---eHHHHHHHHHHHHHHHHHHHHHhhCC-CcchHHHHHHHHHHhcccCcchhhhhhhh
Confidence 11 0 11 11211 1 11235667777777777788888777 5666666554 444556666666666666
Q ss_pred HHhhc
Q 014600 186 VFSVS 190 (422)
Q Consensus 186 l~~~~ 190 (422)
++..+
T Consensus 519 ~v~~f 523 (618)
T KOG3762|consen 519 VVERF 523 (618)
T ss_pred hheee
Confidence 66654
No 244
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=93.08 E-value=4.8 Score=40.95 Aligned_cols=102 Identities=12% Similarity=-0.070 Sum_probs=61.9
Q ss_pred HHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCccchhhhHHHHHHHHHHHHHHHHHH
Q 014600 65 MLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQ 144 (422)
Q Consensus 65 ~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 144 (422)
..+--..-.+...+.+.+.|+.|.|-. |.+|+.....--...+. | + .+ ..| +-..+.|+++++..
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~-lv~ga~~y~~f~~gfl~---~-----N--~y---~~y-fssallG~Gaallw 120 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWA-LVIGATCYAAFPLGFLF---P-----N--SY---YLY-FSSALLGFGAALLW 120 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHH-HHHHhHHHHHHHHHHHh---c-----c--hH---HHH-HHHHHhhhhHHhee
Confidence 444444556667788889999998766 66777666654333221 1 2 11 112 23467899999888
Q ss_pred hhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHH
Q 014600 145 VAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAI 182 (422)
Q Consensus 145 ~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~ 182 (422)
..+...+.+..+ ++.+.+-.++.......+.+++++.
T Consensus 121 ~GqG~ylt~~st-~~tie~Nisi~Wai~~~~li~Ggi~ 157 (461)
T KOG3098|consen 121 TGQGGYLTSNST-RETIERNISIFWAIGQSSLIIGGII 157 (461)
T ss_pred cccceehhhcCC-hhhHHHHHHHHHHHHHHHHHhhhHh
Confidence 888888877654 3444555555545555556665543
No 245
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=92.15 E-value=2 Score=42.64 Aligned_cols=146 Identities=10% Similarity=-0.021 Sum_probs=78.5
Q ss_pred eeeeeeeccchhHHHHHHHHHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHH
Q 014600 24 WSVLYYGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAV 102 (422)
Q Consensus 24 ~~~~~y~~g~~~~~~~~~~~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i 102 (422)
++...+.++.|.--.......++++.|..|. |++..+.+..++.....-.++--+.-++..|+-..|-..+.+.+...+
T Consensus 236 ~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill 315 (422)
T COG0738 236 KHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILL 315 (422)
T ss_pred hHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 3344455555555555566778999999997 999998888877776665555544444555666556544443333333
Q ss_pred HHHHhhcCccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHH
Q 014600 103 SFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAI 182 (422)
Q Consensus 103 ~~~~lf~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~ 182 (422)
.....+. .+.+ ..|.+ .+.+...+.....-.++..+..+ |.++..+--..+..+|+.+.+.+
T Consensus 316 ~~~~~l~----------~g~v---~~~~l--~~ig~F~simfPTIfslal~~l~---~~ts~~s~~l~maivGGAiiP~l 377 (422)
T COG0738 316 LLAVALI----------GGVV---ALYAL--FLIGLFNSIMFPTIFSLALKNLG---EHTSVGSGLLVMAIVGGAIIPPL 377 (422)
T ss_pred HHHHHHh----------cChH---HHHHH--HHHHHHhHHHHHHHHHHHHhccC---ccccccceeeeeheecchHHHHH
Confidence 3322221 1111 22221 23455555555445555555443 33444444344556666665544
Q ss_pred HHHHH
Q 014600 183 AFIVF 187 (422)
Q Consensus 183 ~~~l~ 187 (422)
-+.+.
T Consensus 378 ~G~i~ 382 (422)
T COG0738 378 QGVIA 382 (422)
T ss_pred HHHHH
Confidence 44443
No 246
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=92.13 E-value=2 Score=42.33 Aligned_cols=115 Identities=10% Similarity=-0.086 Sum_probs=67.3
Q ss_pred HHHHHHHHHHHHHHhhcCccCccccCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCc--cchhhHHHHHHH
Q 014600 93 HGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNS--TSRVVLTSCRNA 170 (422)
Q Consensus 93 ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~--~eR~~l~~~~~~ 170 (422)
+++|++...++..++...+.|....++.+ ....|+ ...+..+|.+.+-....++.+|..+++ ++|.+..++-..
T Consensus 4 I~~g~~~~~~G~~ll~l~~~~~~~~~~~~---~~~~~~-gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~ 79 (372)
T PF00854_consen 4 ILLGSIVYLLGHVLLTLSAIPPSLPSGIQ---LGLFYI-GLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYW 79 (372)
T ss_dssp HHHHHHHHHHHHHH--HHHTSSSC---------CHHHH-HHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhHHHHhcchhhhhHH---HHHHHH-HHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHH
Confidence 45678888888776432223422111111 112222 223567888888888899999998754 456778888889
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCCCCchHHHHHHHHHHHHHHHHHHHhhhh
Q 014600 171 FTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFL 221 (422)
Q Consensus 171 ~~~ig~~l~~~~~~~l~~~~~~~g~~~~~~~~~~~~~i~~~i~~i~~~i~~ 221 (422)
..++|.+++.... +.++ +..+|.+.+.+.++..++..+..+
T Consensus 80 ~in~G~~~~~~~~-~~i~---------~~~~~~~~f~i~~~~~~~~~~~f~ 120 (372)
T PF00854_consen 80 GINIGSLFSPTLV-PYIQ---------QNYGWFLGFGIPAIGMLLALIVFL 120 (372)
T ss_dssp HHHHHHHHHHHCC-CHHH---------HCS-HHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhhhHhhcccc-hhhc---------cccchhhhhhHHHHHHHHHHHHHH
Confidence 9999998876443 2222 234787777766665555544333
No 247
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=90.97 E-value=4.7 Score=41.55 Aligned_cols=118 Identities=16% Similarity=0.105 Sum_probs=75.0
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhcccCC--chh---H-HHHHHHHHHHHHHHhhcCccCccccCCccchhhhHHHHHHHH
Q 014600 61 AAAVMLSGQIADGFATIFIGELIDRFGH--FKI---W-HGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAA 134 (422)
Q Consensus 61 ~g~i~~i~~l~~ai~~p~~G~lsDr~Gr--rrp---~-ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~~~~~~~~~~~~~ 134 (422)
.++..++.+++-.+..|+.+++=.|.+| |.| . +-+|.++.++++..+..+....+-....+.+|....| .
T Consensus 310 ~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~----~ 385 (493)
T PRK15462 310 TAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGL----A 385 (493)
T ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHH----H
Confidence 5567788899999999999998777643 222 1 3467888888876654211000000112334443333 3
Q ss_pred HHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHH-HHHHHHHHHHH
Q 014600 135 IFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFT-MVANLSLYAIA 183 (422)
Q Consensus 135 l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~-~ig~~l~~~~~ 183 (422)
++.++.-+....-.++++++.| ++-|++..+...... .+|+.+++.+.
T Consensus 386 ~~t~gEl~~sPvgls~~~~laP-~~~~g~~mg~w~l~~~~~~~~~~g~~~ 434 (493)
T PRK15462 386 VMGFAELFIDPVAMSQITRIEI-PGVTGVLTGIYMLLSGAIANYLAGVIA 434 (493)
T ss_pred HHHHHHHHHChHHHHHHHHhCh-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5777777888888899999986 678899888876533 56666655443
No 248
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=89.47 E-value=1.6 Score=43.96 Aligned_cols=137 Identities=11% Similarity=-0.095 Sum_probs=77.0
Q ss_pred hhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCccchhhhHHHHHHHHHHHHHHHH-HHhhhhhhhhh
Q 014600 75 ATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAA-TQVAHMSMVNC 153 (422)
Q Consensus 75 ~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~p~~al~~~ 153 (422)
.-++..+++|+.|||+. .+.|..++.+.+..+- .|.+. ..+.....+.|.+ ..+...+ =+.......+|
T Consensus 364 Gyw~tv~~id~iGRk~i-q~~GF~~~~i~~~~~~---~~y~~--~~~~~Gf~v~y~l----~~ff~NFGPn~ttfivpaE 433 (538)
T KOG0252|consen 364 GYWFTVYFIDIIGRKYI-QLMGFFIMTIFFFVIA---GPYNQ--LENTIGFVVLYSL----TFFFGNFGPNATTFIVPAE 433 (538)
T ss_pred ceeEEEEEeehhhhHHH-HHhhHHHHHHHHHHHc---CCccc--ccccCceeehHHH----HHHHHhcCCCceeEEeehh
Confidence 34566778999999876 5567777766654432 34331 1122222233332 1111111 01112233456
Q ss_pred ccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchHHHHHHHHHHHHHHHHHHHhhhhccccCcc
Q 014600 154 ITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPR 228 (422)
Q Consensus 154 ~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~~~~~~~~~~~~i~~~i~~i~~~i~~~~~~E~~ 228 (422)
.++ .+-|+...++....+-+|++++.....++.+.- + -...+.++++++.+...++..++.++. +|.+
T Consensus 434 ~FP-arvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~--y---p~~~g~~~v~~i~~~~~~~gi~~T~l~-pEtk 501 (538)
T KOG0252|consen 434 IFP-ARVRSTCHGISAASGKAGAIVGAFGFLYLTDHN--Y---PPNIGVRNVFIILAGCMLLGILFTLLI-PETK 501 (538)
T ss_pred hch-HHHhhhhhhHHHHhccchHHHHHHHhhHhhhcc--C---CccccchHHHHHHHHHHHHhHheeEEe-eccc
Confidence 555 467888888888888888888776555554311 0 012467888888888777776666554 4643
No 249
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=89.28 E-value=7.9 Score=40.85 Aligned_cols=124 Identities=15% Similarity=0.172 Sum_probs=68.7
Q ss_pred HHHHHHHHh-CCCh---hHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCcc
Q 014600 46 YLLLFLTDI-GLSP---RGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTST 121 (422)
Q Consensus 46 ~l~~f~t~~-gls~---~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~ 121 (422)
+.|.....+ +-++ ...+++.....+...+...+.|.+.-+.+|-|..++++.+++.+.+.++-. .-| ++.+
T Consensus 332 l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~ta~~Gama~-~~~----~n~~ 406 (599)
T PF06609_consen 332 LWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVLMTAFCGAMAA-VRP----DNKN 406 (599)
T ss_pred HHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHH-ccC----CCcc
Confidence 334443444 4443 346666666677667777889999988888777677887777665444432 112 1222
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHH
Q 014600 122 LKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYA 181 (422)
Q Consensus 122 ~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~ 181 (422)
.+ +.+. ++.+++.+....|........++ +++-+...+.....-.+|+.++..
T Consensus 407 ~~---i~~~---~l~g~giG~~~~~~~~~~ql~~p-~~~ig~a~gL~~s~R~~GGsIg~a 459 (599)
T PF06609_consen 407 AA---IAFL---VLAGFGIGGILVPAIVIAQLIVP-DEDIGTATGLTGSIRSIGGSIGYA 459 (599)
T ss_pred hH---HHHH---HHHHHhHHHHHHHHHHeeEeeeC-chHHHHHHHHHHHHHHHhhHHHHH
Confidence 22 2222 35666667666666655555444 455555554433333444434333
No 250
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=89.25 E-value=2.9 Score=31.86 Aligned_cols=64 Identities=19% Similarity=0.154 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHh
Q 014600 43 WFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSV 107 (422)
Q Consensus 43 ~~~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~l 107 (422)
.++.+|....|.++|..+.|++-+..-+-..+......++.+|..+|| .+..+.+...++...+
T Consensus 11 yTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~-~~~~~l~~~~~~~~~m 74 (85)
T PF06779_consen 11 YTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRR-LLRAGLLLTVLSTAAM 74 (85)
T ss_pred HHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHH-HHHHHHHHHHHHHHHH
Confidence 345566666666999999999999999999999999999888754444 4667777777666554
No 251
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=89.17 E-value=2.1 Score=43.37 Aligned_cols=131 Identities=8% Similarity=0.011 Sum_probs=72.3
Q ss_pred CChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCccchhhhHHHHHHHHH
Q 014600 56 LSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAI 135 (422)
Q Consensus 56 ls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~~~~~~~~~~~~~l 135 (422)
+++...|.+..++.+...++--+..++--++.-|+. +.+..+..++....-.. .+. .+....+.. -..+++.-.++
T Consensus 252 fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~-~~~t~~~~~~~~l~~~~-lv~-~~n~~~Gi~-d~~f~lgd~~l 327 (433)
T PF03092_consen 252 FSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRI-FVVTTLVSVLASLFDLL-LVT-RWNLDLGIP-DQWFALGDTIL 327 (433)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHhcccEE-EEE-EEeeeeCcC-CeEEEEEhHHH
Confidence 888888888887877776666655554434443443 33333333322111000 000 000000000 00111222245
Q ss_pred HHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 014600 136 FNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVST 191 (422)
Q Consensus 136 ~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~ 191 (422)
..+...+...|...+.+++.++ ..-+...+.-....++|..++..++..+...++
T Consensus 328 ~~~~~~i~~mP~lvl~a~lcP~-G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~ 382 (433)
T PF03092_consen 328 EEVIGMIAFMPSLVLAARLCPK-GSEGTVYALLASFSNLGSSVSSTLGAFLMELFG 382 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHCCC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 6777778888999999999875 445556666666778888777777767766654
No 252
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=89.10 E-value=10 Score=38.33 Aligned_cols=125 Identities=15% Similarity=0.136 Sum_probs=82.1
Q ss_pred HHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHH----HHHHHHHHhhcCccCccccCCcc-c
Q 014600 48 LLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSV----LVAVSFSSVFGGCMPCRILSTST-L 122 (422)
Q Consensus 48 ~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i----~~~i~~~~lf~~~~p~~~~~~~~-~ 122 (422)
..|+...|+++..+|..-.++.+....+..+..++.+|.|..|. =+++.. +..++....|. | ..+ .
T Consensus 282 t~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~-G~~~l~~q~~~L~~~v~~~~~---~-----~~~~~ 352 (432)
T PF06963_consen 282 TAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRA-GLWSLWWQWVCLALCVVSFWA---P-----GSPFS 352 (432)
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhh-HHHHHHHHHHHHHHHHHHHhc---C-----CCCch
Confidence 34444559999999999999999999999999999999997665 223332 22222222232 2 111 1
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHH
Q 014600 123 KVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAI 182 (422)
Q Consensus 123 ~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~ 182 (422)
......++...++-.+|--.++....-++=|..+ ++||+.+++..+...++--++...+
T Consensus 353 ~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~-~~~Rg~v~gvq~sl~~lf~ll~~~~ 411 (432)
T PF06963_consen 353 SISAYLLLGGIALSRIGLWSFDLAVTQIMQENVP-ESERGAVSGVQNSLQSLFELLSFVL 411 (432)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCC-HHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 1111122222234557777777777777777654 7899999999999988887776544
No 253
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=88.68 E-value=26 Score=36.14 Aligned_cols=135 Identities=9% Similarity=-0.098 Sum_probs=68.8
Q ss_pred HhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCccc-hhhhHHHHHHHHHHHHHHHHHHhhhhh
Q 014600 71 ADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTL-KVETISYCVFAAIFNVGWAATQVAHMS 149 (422)
Q Consensus 71 ~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~p~~a 149 (422)
.........+...||+|||.+. ..+.....++.....+ .+ .... +...+... +-..+.+........
T Consensus 362 ~~~p~~~~~~~~~~~~gR~~~~-~~~~~~~~~~~~~~~~--~~-----~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 429 (521)
T KOG0255|consen 362 VELPAYFRNGLLLPEFGRRPPL-FLSLFLAGIGLLLFGW--LP-----DDLGGWLHWILPL----LGKFFIGSAFNLIFL 429 (521)
T ss_pred HHhhHHHHHHHHHHHhCcHHHH-HHHHHHHHHHHHHHHH--hh-----ccchhHHHHHHHH----HHHHHHHHHHHHHHH
Confidence 3333444447888999998774 4566666665544322 12 1111 11112222 111122211112245
Q ss_pred hhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchHHHHHHHHHHHHHHHHHHHhhhhccccCccc
Q 014600 150 MVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRL 229 (422)
Q Consensus 150 l~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~~~~~~~~~~~~i~~~i~~i~~~i~~~~~~E~~~ 229 (422)
..+|+.++ .-|....+.-...+.+|+++++.+........ .... ..+++..+.+...++....+|++.
T Consensus 430 ~~~el~pt-~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~~~---------~~~~--~~~~~~~~~l~~~~~~~~lpet~~ 497 (521)
T KOG0255|consen 430 YSAELIPT-VVRNTAVGAISAAARLGSILAPLFPLLLRQMF---------PLLG--LILFGWLALLLGLLSLLLLPETKG 497 (521)
T ss_pred HHHhhccH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc---------ccch--HHHHHHHHHHHHHHHHhcCcccCC
Confidence 56677664 46888888888888888887765432211110 0111 111455566666666678888653
No 254
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=87.87 E-value=35 Score=34.97 Aligned_cols=206 Identities=9% Similarity=0.022 Sum_probs=103.7
Q ss_pred CCChhHHHHHHHHHHH-HhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcC-ccCcc--ccCC----------c
Q 014600 55 GLSPRGAAAVMLSGQI-ADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGG-CMPCR--ILST----------S 120 (422)
Q Consensus 55 gls~~~~g~i~~i~~l-~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~-~~p~~--~~~~----------~ 120 (422)
...+..+..+-...-+ ...+..++.++++++.-|+|.+-.+.. .+. +++++|.. .-|.. +.++ .
T Consensus 57 ~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~-~F~-~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~ 134 (509)
T COG3202 57 RQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILG-FFL-GFFALFAFVIYPYKDILHPDPEFSRDLFADL 134 (509)
T ss_pred cCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHH-HHH-HHHHHHHHHHhccccccCCCHHHHHHHHhhC
Confidence 3556677777666666 666788999999999988887644322 222 22222210 00211 0111 0
Q ss_pred cch----------hhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 014600 121 TLK----------VETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVS 190 (422)
Q Consensus 121 ~~~----------~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~ 190 (422)
+.. |....|.++.=+++.. ....-++....|+++ .+|-.|..+.-+.+++++.++++.+...+....
T Consensus 135 p~~l~~~ili~~~Ws~s~~Yi~aELWgsl--V~S~lFw~faNeitt-~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~~ 211 (509)
T COG3202 135 PMFLKWFILIVGEWSYSLFYIMAELWGSL--VLSLLFWQFANEITT-IEEAKRFYPLFGLGANISLLLSGEVTSWLSKHR 211 (509)
T ss_pred CccceeeeEeecchHHHHHHHHHHHHHHH--HHHHHHHHHHHHhhh-HHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhch
Confidence 100 2222221111122210 222346888899886 577888888888888888877766554443211
Q ss_pred cCCCCCchHHHHHHHHHHHHHHHHHHHhhhhccccC---ccc---c-----cccCCCcchhhhHHHHHHhHHHHHHHHHH
Q 014600 191 TAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEE---PRL---K-----MGLRGNSHARISWAYWFKKILYYQVALVY 259 (422)
Q Consensus 191 ~~~g~~~~~~~~~~~~~i~~~i~~i~~~i~~~~~~E---~~~---~-----~~~~~~~~~~~~~~~~~~n~~f~~~~~~~ 259 (422)
...-........+..+.+.+..++++.++..+.=|+ ++. + ++++.+.+..++++.+.|+|....+.+.-
T Consensus 212 ~~~~~~~~~~~~~~~~~vi~~~~~i~~~l~~~~~r~il~~~~f~~~~~~kk~~~k~k~~~~~s~k~i~~SkyL~~ial~v 291 (509)
T COG3202 212 DALASEFKDLLLQILFIVIVILGIIAILLYRYINRNVLTDPLFYLRAKKKKKKKKLKLGLIESFKMILRSKYLGAIALLV 291 (509)
T ss_pred hhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhHHHhcccccccccCcHHHHHHHHHhhhHHHHHHHHH
Confidence 000000011224444555555555554444332221 111 0 11122345678899999999876655444
Q ss_pred HHHHHH
Q 014600 260 MLTRLV 265 (422)
Q Consensus 260 ~~~~~~ 265 (422)
++.+.+
T Consensus 292 l~Y~v~ 297 (509)
T COG3202 292 LAYGVS 297 (509)
T ss_pred HHHHHH
Confidence 444333
No 255
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=87.83 E-value=4.6 Score=42.40 Aligned_cols=137 Identities=12% Similarity=0.029 Sum_probs=70.6
Q ss_pred HHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhc-ccCCchhHHHHHHHHHHHHHHHhhc-CccC------
Q 014600 43 WFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELID-RFGHFKIWHGAGSVLVAVSFSSVFG-GCMP------ 113 (422)
Q Consensus 43 ~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsD-r~Grrrp~ll~g~i~~~i~~~~lf~-~~~p------ 113 (422)
+..-+..|+++. +.+...+.-......=.......+.++++| .+||.+. +.++..+..++.+++-. ..+|
T Consensus 56 ~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~t-I~~~s~i~~~G~~~lt~~a~~~~l~p~~ 134 (571)
T KOG1237|consen 56 LVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFT-INIGSLISLLGLFGLTLSAMIPALLPFM 134 (571)
T ss_pred chhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHH-HHHHHHHHHHHHHHHHHHHHhhhcCCcc
Confidence 335577888887 777755554444444444445567888999 5899888 45565655555333211 0111
Q ss_pred c---cc---cCCccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCC--ccchh---hHHHHHHHHHHHHHHHHHH
Q 014600 114 C---RI---LSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLN--STSRV---VLTSCRNAFTMVANLSLYA 181 (422)
Q Consensus 114 ~---~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~--~~eR~---~l~~~~~~~~~ig~~l~~~ 181 (422)
| .. .+..+.....+.|.. ..+..++.+..-....+..+|..++ +++|. ....|.....++|.+++..
T Consensus 135 ~~~~~~~~~c~~~s~~q~~~~~~~-l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t 212 (571)
T KOG1237|consen 135 CKFKPGGNVCESPSKLQLAVLYGA-LYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQT 212 (571)
T ss_pred ccCCCCCCcccCcchHHHHHHHHH-HHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHH
Confidence 0 00 000111111122221 1123345555566667777777762 33433 3455666666666666543
No 256
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=87.48 E-value=15 Score=37.75 Aligned_cols=72 Identities=8% Similarity=0.039 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchHHHHHHHHHHHHHHH
Q 014600 134 AIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIG 213 (422)
Q Consensus 134 ~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~~~~~~~~~~~~i~~~i~ 213 (422)
+++++..++.+..+.+.+.+..+|++||+...+-.....++..++...++..++. +.||.....+.-++.
T Consensus 274 i~y~~~~nlve~~~k~~v~~~~p~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~----------~~Gw~~~a~i~Pii~ 343 (472)
T TIGR00769 274 IAYGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIR----------KYGWLTAALITPLVM 343 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HhhHHHHHHHHHHHH
Confidence 3577888999999999999999999999988887766666666555544444443 347777666554444
Q ss_pred HH
Q 014600 214 CC 215 (422)
Q Consensus 214 ~i 215 (422)
++
T Consensus 344 li 345 (472)
T TIGR00769 344 LL 345 (472)
T ss_pred HH
Confidence 44
No 257
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=85.68 E-value=1.7 Score=40.44 Aligned_cols=97 Identities=11% Similarity=0.088 Sum_probs=54.8
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchHHHHHHHHHHHHHHHHHHHhhhhccccCc--ccccccCC-
Q 014600 159 TSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEP--RLKMGLRG- 235 (422)
Q Consensus 159 ~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~~~~~~~~~~~~i~~~i~~i~~~i~~~~~~E~--~~~~~~~~- 235 (422)
++|+.++.+...+-++|.++... |++-..+ . ....+..|++...+.+++.++-.++..++=+|- ..++++++
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~i---pF~~~~~-~-~~~~~~~W~~I~si~~lL~~IpLIly~ifGk~fd~~~~~~k~~k 76 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNI---PFLISSS-V-VIALTNNWQWILSIFILLIFIPLILYIIFGKNFDIYSPKEKQEK 76 (267)
T ss_pred CccceeeeeccccchhhHHHHHh---hHHhcch-H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCccccccc
Confidence 57888888888888888877653 3332100 0 011245688888777766655544444433331 11111111
Q ss_pred ---CcchhhhHHHHHHhHHHHHHHHHHH
Q 014600 236 ---NSHARISWAYWFKKILYYQVALVYM 260 (422)
Q Consensus 236 ---~~~~~~~~~~~~~n~~f~~~~~~~~ 260 (422)
+.+.++..++.+|+|.-|...+.|-
T Consensus 77 ~~~~~~~~~s~~~~LK~K~tw~w~~~Yg 104 (267)
T PF07672_consen 77 ENSTLSKKPSYKSILKEKETWKWILIYG 104 (267)
T ss_pred ccccccccchHHHHHccchHHHHHHHHH
Confidence 1224567889999998766555443
No 258
>PRK03612 spermidine synthase; Provisional
Probab=84.11 E-value=44 Score=34.74 Aligned_cols=37 Identities=19% Similarity=0.095 Sum_probs=28.0
Q ss_pred HHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhh
Q 014600 47 LLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELI 83 (422)
Q Consensus 47 l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~ls 83 (422)
....+... |-+....+.++++....-+++.-+.|++.
T Consensus 37 ~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~ 74 (521)
T PRK03612 37 LGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLL 74 (521)
T ss_pred HHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 34445555 88888889999998888888887777765
No 259
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=83.00 E-value=51 Score=33.66 Aligned_cols=114 Identities=12% Similarity=0.085 Sum_probs=65.5
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhc---ccCCchhHHHHHHHHHHHHHHHhhcCccCcccc--CCccc--hh--hhHHHHH
Q 014600 61 AAAVMLSGQIADGFATIFIGELID---RFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRIL--STSTL--KV--ETISYCV 131 (422)
Q Consensus 61 ~g~i~~i~~l~~ai~~p~~G~lsD---r~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~--~~~~~--~~--~~~~~~~ 131 (422)
.+.-.....+...+.....+.+++ |+||+.. +..+.+...+.+.+... ..|.+.. ++... .+ .....++
T Consensus 281 ~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~-~~~~~~~~~~~~~li~l-~~p~dap~~~t~~~~~~~~~~~~~~~i 358 (461)
T KOG3098|consen 281 IAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPT-VLIGIIIHLIGFLLIHL-SFPNDAPLRPTDSPPLLFTPSYYLALI 358 (461)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcc-hhHHHHHHHHHHHHHhc-cccccCCCCCCcccccccccchhHHHH
Confidence 344444444444555566677776 4888655 66777777777666554 4563321 11110 00 1112233
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHH
Q 014600 132 FAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLS 178 (422)
Q Consensus 132 ~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l 178 (422)
...+++++.++.+.--........ +++|.++.++......+++.+
T Consensus 359 i~~l~G~~D~~~~t~~~~ii~~~~--~~~~~~~fsi~kfyq~~~s~v 403 (461)
T KOG3098|consen 359 IGFLLGFGDACFNTQRYVIIALLY--PDDRAQAFSLFKFYQSVASCV 403 (461)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHh--cCchHHHHHHHHHHHHHHHHH
Confidence 335688888888887777777765 567777777665555555544
No 260
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=81.58 E-value=1.4 Score=44.31 Aligned_cols=100 Identities=11% Similarity=0.031 Sum_probs=59.5
Q ss_pred CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCccchhhhHHHHHHHH
Q 014600 55 GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAA 134 (422)
Q Consensus 55 gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~~~~~~~~~~~~~ 134 (422)
|-+...+|.+-....+...+...++|.+.||+.+.|.-++.......++...+++ +. ..+.. .+ +.|.. ..
T Consensus 297 gY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~-~t---~~~~~-~v---iv~~t-~~ 367 (480)
T KOG2563|consen 297 GYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLT-CT---LFLGD-SV---IVFTT-CG 367 (480)
T ss_pred cCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHH-hh---ccCCc-eE---ehhhh-HH
Confidence 5666777778788888888888999999999988877666555554444222222 10 01111 11 22221 12
Q ss_pred HHHHHHHHHHhhhhhhhhhccCCccchhh
Q 014600 135 IFNVGWAATQVAHMSMVNCITLNSTSRVV 163 (422)
Q Consensus 135 l~~~~~~~~~~p~~al~~~~t~~~~eR~~ 163 (422)
+++.+.+....-...+..|.|-+..|++.
T Consensus 368 ~~g~~~~~~~Pig~ElgvE~TyPv~E~tS 396 (480)
T KOG2563|consen 368 LLGFFGTGYLPIGFELGVETTYPVAEGTS 396 (480)
T ss_pred HHHHhhcCCCCcceeeeeeeccccCCccc
Confidence 45555555544556677777776677764
No 261
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=76.65 E-value=35 Score=33.56 Aligned_cols=48 Identities=17% Similarity=0.057 Sum_probs=35.2
Q ss_pred HHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 014600 140 WAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFS 188 (422)
Q Consensus 140 ~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~ 188 (422)
.++..++|.+.+-+..+ ++++-++.+........|-.+++.++..+++
T Consensus 108 ~tAaEIAYysYIYs~Vd-~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs 155 (433)
T KOG3810|consen 108 ATAAEIAYYSYIYSKVD-PEMYKRVTGYCRAAFLVGKFVGSVLAQLLVS 155 (433)
T ss_pred HHHHHHhhhheeeeecC-HHHHHHHHHHhHHHHHHHhHHHhHHHHHHhh
Confidence 45678889988888764 7788888887767777777777766655544
No 262
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=76.02 E-value=2.3 Score=39.93 Aligned_cols=50 Identities=14% Similarity=0.288 Sum_probs=38.9
Q ss_pred HHHHHHHHHhCCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHH
Q 014600 45 TYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHG 94 (422)
Q Consensus 45 ~~l~~f~t~~gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll 94 (422)
+|+-+.|+..|....++|.++..+.--..+..-+.|.+.||-||||....
T Consensus 58 PYvYyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvt 107 (454)
T KOG4332|consen 58 PYVYYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVT 107 (454)
T ss_pred ceeeeeehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceee
Confidence 45555566668889999988877766667777889999999999998543
No 263
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=73.17 E-value=24 Score=36.14 Aligned_cols=123 Identities=7% Similarity=-0.029 Sum_probs=77.9
Q ss_pred HHHHh--CCChhHHHHHHHHHHHHhhhhhhhhh-hhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccCCccchhhh
Q 014600 50 FLTDI--GLSPRGAAAVMLSGQIADGFATIFIG-ELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVET 126 (422)
Q Consensus 50 f~t~~--gls~~~~g~i~~i~~l~~ai~~p~~G-~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~~~~~ 126 (422)
+|++. |.+..+.+...+.......+.+.+.. .+.-.+|.|+ .+..|...-.+.....- +... .|..+
T Consensus 266 ~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~-~i~lGl~~~~~~~~~~a-------f~~~--~w~~~ 335 (463)
T KOG2816|consen 266 LYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKR-LISLGLLSEFLQLLLFA-------FATE--TWMMF 335 (463)
T ss_pred EEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-HhhHHHHHHHHHHHHHH-------Hhcc--chhhh
Confidence 45554 88999999998888888888888776 6666788777 45566655555543211 1111 12111
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 014600 127 ISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFS 188 (422)
Q Consensus 127 ~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~ 188 (422)
... ..............+..+.+. +++||+++.++......+.+++++.+-..+..
T Consensus 336 ~~~-----v~~~~~~~~~pa~~s~~s~~v-~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~ 391 (463)
T KOG2816|consen 336 AAG-----VVVALAGIVFPAIRAFASILV-SPEEQGKVFGIISGIEGLSGVVSPALYGNIFA 391 (463)
T ss_pred HHH-----HHHHhhcchhHHHHhHHHhhc-ccccccchhhHHHHHHHHhhhhhHHHHHHHHH
Confidence 111 222222334445566666665 48999999999988888888887777666554
No 264
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=69.72 E-value=48 Score=34.19 Aligned_cols=74 Identities=7% Similarity=0.036 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchHHHHHHHHHHHHHHH
Q 014600 134 AIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIG 213 (422)
Q Consensus 134 ~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~~~~g~~~~~~~~~~~~~i~~~i~ 213 (422)
+.+++..+.++..+.+.+.+..+|++|++...+--....++-.++...++..++. ..||+..+.+.-++.
T Consensus 290 i~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~~iir----------~~GW~~~AlitPiv~ 359 (491)
T PF03219_consen 290 IAYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIR----------RFGWRTAALITPIVI 359 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HhhHHHHHHHhHHHH
Confidence 4588888999999999999999999998877665554444444444444444433 347777666554444
Q ss_pred HHHH
Q 014600 214 CCFV 217 (422)
Q Consensus 214 ~i~~ 217 (422)
+++.
T Consensus 360 lit~ 363 (491)
T PF03219_consen 360 LITG 363 (491)
T ss_pred HHHH
Confidence 4333
No 265
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=63.97 E-value=54 Score=32.69 Aligned_cols=128 Identities=16% Similarity=0.118 Sum_probs=76.8
Q ss_pred HHHHHHh--CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccC-CchhHHHHHHHHHHHHHHHhhcCccCccccCCccchh
Q 014600 48 LLFLTDI--GLSPRGAAAVMLSGQIADGFATIFIGELIDRFG-HFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKV 124 (422)
Q Consensus 48 ~~f~t~~--gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~G-rrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~~~ 124 (422)
..++++. |.++.+.|-+++...+..++.+...+...||.. .-+-.+.... ...+-.+++.. .... ..
T Consensus 284 ~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l-~~~vP~~llls------~~~~--~~- 353 (451)
T KOG2615|consen 284 VLFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSL-LLIVPAFLLLS------LART--PV- 353 (451)
T ss_pred HHHhhcCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHH-HHHHHHHHHHh------cccc--ch-
Confidence 4455443 889999999999999999999999999888743 3233232222 22222222221 1111 11
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 014600 125 ETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSV 189 (422)
Q Consensus 125 ~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~ 189 (422)
..|. ...++.+.-+...+....+..... +++||+.++++....+.++-.+++.+.+.+..+
T Consensus 354 --~l~~-~s~l~sf~~A~~vt~Lt~Lv~~~~-~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~W 414 (451)
T KOG2615|consen 354 --VLYL-GSTLKSFSTASVVTCLTSLVHKYG-PQSQRGTLNGIFRSLGALARAIGPLVSGVIFSW 414 (451)
T ss_pred --hhhH-HHHHHHHHHHHhhHHHHHHHHhcC-CcccchHHHHHHHHHHHHHHHhhhhhhheeEEE
Confidence 2222 112344444444444455555554 478999999998888888888887776555544
No 266
>PF12832 MFS_1_like: MFS_1 like family
Probab=57.67 E-value=65 Score=23.81 Aligned_cols=61 Identities=16% Similarity=0.251 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHhhhHHHHHHhhhccCccchhHhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCccc
Q 014600 257 LVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQVTGISMQNVLVGEDLS 323 (422)
Q Consensus 257 ~~~~~~~~~~~~~~~y~~~y~~~~~~l~~~~~~~iP~~~~~~~~~~~~~~~v~~~~~~~~~~g~r~~ 323 (422)
..|++...+......|++.|..+ .|+++...+.+-.+..+..++...+ ++...|++++++.
T Consensus 7 ~~yf~~f~~~g~~~Pfl~~~~~~-~Gl~~~~iGil~~i~~~~~~~~~pl-----~g~laDk~~~~~~ 67 (77)
T PF12832_consen 7 AFYFFYFAALGCLYPFLPLYLKQ-LGLSPSQIGILSAIRPLIRFLAPPL-----WGFLADKFGKRKV 67 (77)
T ss_pred HHHHHHHHHHHHHHhhhhHhhhh-cCCCHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHCccHH
Confidence 45666667778889999999996 6888776654333222222222111 2344666666654
No 267
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=55.84 E-value=1.7e+02 Score=29.66 Aligned_cols=56 Identities=13% Similarity=0.113 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHH
Q 014600 129 YCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFI 185 (422)
Q Consensus 129 ~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~ 185 (422)
++++.+++++..+....-.....++..+ ++||..+..+...+..+|-.+|+.++..
T Consensus 375 ~~~~~~l~gltnGy~~s~~m~~~p~~v~-~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~ 430 (437)
T TIGR00939 375 FIILMLLFGFSNGYLGSLSMCLAPRQVD-PHEREVAGALMVIFLLVGLALGAVLSFL 430 (437)
T ss_pred HHHHHHHHHHhhhHHHHHHHHhcCCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444456666666555555556677654 6899888888877777777777665543
No 268
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=54.28 E-value=96 Score=31.05 Aligned_cols=25 Identities=8% Similarity=0.014 Sum_probs=15.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHh-CCCh
Q 014600 34 MLNDITAACWFTYLLLFLTDI-GLSP 58 (422)
Q Consensus 34 ~~~~~~~~~~~~~l~~f~t~~-gls~ 58 (422)
+|.-..++...+--++|+.+. +-++
T Consensus 28 iG~LlpWN~fiTa~~y~~~~~~~~~~ 53 (406)
T KOG1479|consen 28 IGTLLPWNMFITASDYYYYRFPGYHN 53 (406)
T ss_pred cccccchHhhhccHHHHHhhcCCCch
Confidence 334455666666667778777 5554
No 269
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=52.55 E-value=1.5e+02 Score=30.42 Aligned_cols=115 Identities=10% Similarity=-0.017 Sum_probs=61.7
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhcccC--CchhH--H--HHHHHHHHHHHHHhhcCccCccc-cCCccchhhhHHHHHHH
Q 014600 61 AAAVMLSGQIADGFATIFIGELIDRFG--HFKIW--H--GAGSVLVAVSFSSVFGGCMPCRI-LSTSTLKVETISYCVFA 133 (422)
Q Consensus 61 ~g~i~~i~~l~~ai~~p~~G~lsDr~G--rrrp~--l--l~g~i~~~i~~~~lf~~~~p~~~-~~~~~~~~~~~~~~~~~ 133 (422)
.++..+..+++-.+..|+..++.-|.| +|.|- + -+|..+++.++..+-.+..-.+- .+..+.+|....|+
T Consensus 326 ~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~--- 402 (498)
T COG3104 326 PAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYV--- 402 (498)
T ss_pred HHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHH---
Confidence 456778888888888898888888744 33332 2 24555555555443210000010 11234555545554
Q ss_pred HHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHH
Q 014600 134 AIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLY 180 (422)
Q Consensus 134 ~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~ 180 (422)
+..++.=+.++.-.+++..+.+ +.-.+.+.+........|+.++.
T Consensus 403 -l~s~gEL~iSpvGLs~~t~laP-~~~~s~~ma~wfLt~a~~~~l~g 447 (498)
T COG3104 403 -LQSFGELFISPVGLSMVTKLAP-PALKSFIMAMWFLTVAAGQTLGG 447 (498)
T ss_pred -HHHHHHHHhCHHHHHHHHHhCh-HHHHHHHHHHHHHHHHHHHHhhc
Confidence 4566666666666777777664 33344455554444444444433
No 270
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=49.84 E-value=1.1e+02 Score=30.32 Aligned_cols=37 Identities=14% Similarity=-0.005 Sum_probs=29.1
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHH
Q 014600 58 PRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHG 94 (422)
Q Consensus 58 ~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll 94 (422)
...=|..=++..+.+|+.+...|++--+|-|.+-.++
T Consensus 270 ~vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll 306 (433)
T KOG3810|consen 270 NVYNGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLL 306 (433)
T ss_pred hhhcCHHHHHHHHHHHHHHHHHHheeeccchhhHHHH
Confidence 3456788899999999999999999987776655443
No 271
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=49.13 E-value=1.9e+02 Score=29.79 Aligned_cols=77 Identities=9% Similarity=-0.023 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHH-HHHHHHhhccCCCCCchHHHHHHHHHHHHHH
Q 014600 134 AIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYA-IAFIVFSVSTAKTHADLENQYRWIAYSSIFI 212 (422)
Q Consensus 134 ~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~-~~~~l~~~~~~~g~~~~~~~~~~~~~i~~~i 212 (422)
+.++++.+++..++.+-+.+..++.+|++..++--....++-.++... .+.-++ .+.||.+.+++.-++
T Consensus 292 l~Y~v~inLvE~~wKs~ik~~~~~~~~~~~f~~~~~~~tgvv~~v~~~~~~s~~i----------r~~GW~~~AlitPiv 361 (509)
T COG3202 292 LAYGVSINLVEGVWKSGIKELYPTTNEYTAFMGRFQIWTGVVSLVVFLFPGSNLI----------RRVGWFTGALITPLV 361 (509)
T ss_pred HHHHHHHHHHHHHHHHhHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhHHHH----------HHhhHHHHHHHHHHH
Confidence 458899999999999999999998888887776655444443222221 112222 346888877776666
Q ss_pred HHHHHhhh
Q 014600 213 GCCFVGIF 220 (422)
Q Consensus 213 ~~i~~~i~ 220 (422)
.++..++.
T Consensus 362 ~litg~lF 369 (509)
T COG3202 362 MLITGVLF 369 (509)
T ss_pred HHHHHHHH
Confidence 66554443
No 272
>PTZ00207 hypothetical protein; Provisional
Probab=46.90 E-value=1.9e+02 Score=30.70 Aligned_cols=141 Identities=7% Similarity=-0.064 Sum_probs=80.4
Q ss_pred HHHHHHHHhhhhhhhhhhhhc---ccC-----CchhHHHHHHHHHHHHHHHhhcCccCccccCCccchhhhHHHHHHHHH
Q 014600 64 VMLSGQIADGFATIFIGELID---RFG-----HFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAI 135 (422)
Q Consensus 64 i~~i~~l~~ai~~p~~G~lsD---r~G-----rrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~~~~~~~~~~~~~l 135 (422)
..++..+|++++-..+|+++. |.+ .|..|+.+..+ +.++..+++. .+| . + ...+-+ ++
T Consensus 396 ~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~~~~~-~~~~~lll~~-~~p-----~-~--~L~~~~----~l 461 (591)
T PTZ00207 396 LTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALFIPSV-CIITMLTLFL-TLP-----K-A--ALPLPY----FI 461 (591)
T ss_pred ehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHHHHHH-HHHHHHHHHH-HCC-----c-c--HhHHHH----HH
Confidence 578889999999999999884 222 11223433333 5555555553 123 1 1 122333 35
Q ss_pred HHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHH-HHHHHHhhccCCCCCc----hHHHHHHHHHHHH
Q 014600 136 FNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYA-IAFIVFSVSTAKTHAD----LENQYRWIAYSSI 210 (422)
Q Consensus 136 ~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~-~~~~l~~~~~~~g~~~----~~~~~~~~~~i~~ 210 (422)
.++++++......+..+|++. ++-++...+....+-+|+++.+. +.+.+.+.-...+ ++ ...=++..+++.+
T Consensus 462 vg~~~G~~~~~~~~i~selFg--k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~-~~~~C~G~~C~~~~~~v~~ 538 (591)
T PTZ00207 462 AAFANGFMAATIALVTRTIFA--KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKL-GQDVCTERVCVVMPLAFLL 538 (591)
T ss_pred HHHHhhHhHHHHHHHHHHHhc--cchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhC-CCCeeCCceeeHhHHHHHH
Confidence 677777777677788889886 56777777777777777766532 2334443211111 11 1123677777777
Q ss_pred HHHHHHHhhhh
Q 014600 211 FIGCCFVGIFL 221 (422)
Q Consensus 211 ~i~~i~~~i~~ 221 (422)
.+++...+...
T Consensus 539 ~~~~~g~~~s~ 549 (591)
T PTZ00207 539 GLSFLAFITST 549 (591)
T ss_pred HHHHHHHHHHh
Confidence 66666655543
No 273
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=44.78 E-value=13 Score=38.12 Aligned_cols=51 Identities=8% Similarity=0.045 Sum_probs=36.6
Q ss_pred HHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 014600 135 IFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIV 186 (422)
Q Consensus 135 l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l 186 (422)
.++.++.+.+++..++.++... |++++...+.-......+.++++.+....
T Consensus 397 ~~g~~~P~~~~~~~tlySkiLg-p~~q~~~qg~~~~~~s~~~~~~~~~~t~~ 447 (488)
T KOG2325|consen 397 VFGIAFPFISTALDTLYSKILG-PRDQGTMQGVFSISGSIARVVGPIFSTAI 447 (488)
T ss_pred eeccccccccchHHHHHHHHhC-CccccceeEEEEeccchhhhhhHHHHhhh
Confidence 5777788888999999999876 67777777766666666666665544333
No 274
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=44.26 E-value=1.5e+02 Score=23.07 Aligned_cols=30 Identities=10% Similarity=-0.032 Sum_probs=13.6
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhcccCCchh
Q 014600 62 AAVMLSGQIADGFATIFIGELIDRFGHFKI 91 (422)
Q Consensus 62 g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp 91 (422)
|.......+...+..++.|.+.|+.|.+..
T Consensus 90 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 119 (141)
T TIGR00880 90 GLMSAGIALGPLLGPPLGGVLAQFLGWRAP 119 (141)
T ss_pred HHHHHhHHHHHHHhHHhHHHHhcccchHHH
Confidence 333444444444444455555554444333
No 275
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=41.65 E-value=1.1e+02 Score=24.43 Aligned_cols=38 Identities=3% Similarity=-0.139 Sum_probs=27.3
Q ss_pred hccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 014600 153 CITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVS 190 (422)
Q Consensus 153 ~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~~ 190 (422)
|-+.++++++...+++...-.+++++.+...+++++.+
T Consensus 32 ~~~~a~s~k~~~~a~klssefIsGilVGa~iG~llD~~ 69 (116)
T COG5336 32 EKSSAESIKGYAQAFKLSSEFISGILVGAGIGWLLDKF 69 (116)
T ss_pred ccccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33445677788888888877888877776667777754
No 276
>PRK10527 hypothetical protein; Provisional
Probab=37.32 E-value=2.3e+02 Score=23.25 Aligned_cols=26 Identities=19% Similarity=0.051 Sum_probs=20.2
Q ss_pred CchhHHHHHHHHHHHHHHHhhcCccC
Q 014600 88 HFKIWHGAGSVLVAVSFSSVFGGCMP 113 (422)
Q Consensus 88 rrrp~ll~g~i~~~i~~~~lf~~~~p 113 (422)
+|..|+..|.+..+++.+..+.|..|
T Consensus 2 ~R~l~~~lG~~~~~LG~iGi~LPlLP 27 (125)
T PRK10527 2 QRIILIIIGWLAVVLGTLGVVLPLLP 27 (125)
T ss_pred hhHHHHHHHHHHHHHHHHHHhccCCC
Confidence 46667788999999999988876444
No 277
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=36.95 E-value=90 Score=26.67 Aligned_cols=36 Identities=3% Similarity=-0.136 Sum_probs=25.0
Q ss_pred HHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHH
Q 014600 141 AATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLS 178 (422)
Q Consensus 141 ~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l 178 (422)
+..-+.|..+.+.+ |+++.+.+.++-.+-.+++-+.
T Consensus 110 gllGisYGilSaSW--D~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 110 GLLGISYGILSASW--DPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred HHHhhhhhhccccc--CCCCCCCcccHHHHHHhHHHHH
Confidence 34445666666665 5777899999988887776543
No 278
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=36.76 E-value=2.9e+02 Score=28.59 Aligned_cols=121 Identities=10% Similarity=0.040 Sum_probs=65.4
Q ss_pred HHHHHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHHHHhhcCccCccccC
Q 014600 40 AACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILS 118 (422)
Q Consensus 40 ~~~~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~~~lf~~~~p~~~~~ 118 (422)
+..+..|...-..++ +-....=|.+-++..+..++.+...|++-.+|.|--- +.. ++..++-..+++. ++.
T Consensus 278 ~~qv~~Y~Q~LW~~v~~~~~~yNG~veA~~tllga~~a~~ag~~~~~w~~~~~-l~l-~v~s~~~~gll~~------m~~ 349 (511)
T TIGR00806 278 YYLITYYVHTLWGTLDESLNKYNGAVDAASTLLGAITSFIAGFVNIRWARWSK-LLI-AVVSAIQAGLVFW------MSQ 349 (511)
T ss_pred HHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHHhhcCCchhhHH-HHH-HHHHHHHHHHhhh------hhc
Confidence 334445555555555 4233478899999999999999999999777633212 222 2332332222332 112
Q ss_pred CccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHH
Q 014600 119 TSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTM 173 (422)
Q Consensus 119 ~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ 173 (422)
..+.+..++.|+ +|...|.+..+-..+-++.--. .+.-+.+.++.+....
T Consensus 350 t~~Iw~~Y~~yv----lf~~~y~flitia~~~iA~~L~-~~~~aLvFGiNtfvAl 399 (511)
T TIGR00806 350 SHDIWVLYVTYV----LFRGIYQFLVPIATFQIASSLS-KELCALVFGINTFVAT 399 (511)
T ss_pred ccchHHHHHHHH----HHHHHHHHHHHHHHHHHHHHhc-ccceEEEEecHHHHHH
Confidence 234555556665 5666666554444444443321 2233677777655443
No 279
>PF00032 Cytochrom_B_C: Cytochrome b(C-terminal)/b6/petD; InterPro: IPR005798 In the mitochondrion of eukaryotes and in aerobic prokaryotes, cytochrome b is a component of respiratory chain complex III (1.10.2.2 from EC) - also known as the bc1 complex or ubiquinol-cytochrome c reductase. In plant chloroplasts and cyanobacteria, there is a analogous protein, cytochrome b6, a component of the plastoquinone-plastocyanin reductase (1.10.99.1 from EC), also known as the b6f complex. Cytochrome b/b6 [, ] is an integral membrane protein of approximately 400 amino acid residues that probably has 8 transmembrane segments. In plants and cyanobacteria, cytochrome b6 consists of two subunits encoded by the petB and petD genes. The sequence of petB is colinear with the N-terminal part of mitochondrial cytochrome b, while petD corresponds to the C-terminal part. Cytochrome b/b6 non-covalently binds two haem groups, known as b562 and b566. Four conserved histidine residues are postulated to be the ligands of the iron atoms of these two haem groups. Apart from regions around some of the histidine haem ligands, there are a few conserved regions in the sequence of b/b6. The best conserved of these regions includes an invariant P-E-W triplet which lies in the loop that separates the fifth and sixth transmembrane segments. It seems to be important for electron transfer at the ubiquinone redox site - called Qz or Qo (where o stands for outside) - located on the outer side of the membrane. This entry is the C terminus of these proteins.; GO: 0009055 electron carrier activity, 0016491 oxidoreductase activity, 0016020 membrane; PDB: 2E76_B 2D2C_B 1VF5_B 2E74_B 2E75_B 2ZT9_B 2YIU_D 1Q90_D 1ZRT_C 1PPJ_P ....
Probab=35.77 E-value=1.1e+02 Score=23.83 Aligned_cols=59 Identities=20% Similarity=0.227 Sum_probs=34.9
Q ss_pred HHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHHHHHHHH
Q 014600 46 YLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSF 104 (422)
Q Consensus 46 ~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i~~~i~~ 104 (422)
|+..+|.-. -++....|.+.....+...+.-|..-+-..|-.++||..........+.+
T Consensus 16 YFl~~y~iLr~ip~k~~Gv~~~~~~~~~l~~lP~ld~~~~~~~~~rp~~~~~~~~~v~~~ 75 (102)
T PF00032_consen 16 YFLPFYAILRSIPNKLGGVIAMGLSILILFLLPFLDRSPVRSPRFRPIFRAAFWLFVISF 75 (102)
T ss_dssp GGHHHHHHHHHSSSHHHHHHHHHHHHHHHHTHHHHTSCSSSSCGGSHHHHHHHHHHHHHH
T ss_pred ccccccceeeecccccceeeecchhhhhHHHHHhhcchhhhhhhhcccccchhhhHHhHH
Confidence 444555544 57777888888877777666677654333355556665544433444333
No 280
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=35.20 E-value=5.4e+02 Score=26.81 Aligned_cols=55 Identities=9% Similarity=-0.005 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 014600 134 AIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSV 189 (422)
Q Consensus 134 ~l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l~~~ 189 (422)
++..+..+...++..|.-+.+. ||.--+..++.-+..+|+|+---..+...+++.
T Consensus 413 ~l~sf~stvmFVai~AFharIS-DP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~ 467 (544)
T PF13000_consen 413 VLSSFMSTVMFVAIMAFHARIS-DPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDY 467 (544)
T ss_pred HHHHHHHHHHHHHHHHHHhhcc-CcccchHHHHHHHHHHhcCCCchHHHHHHHhhh
Confidence 3455666677777788877775 588888888888888888764433333344443
No 281
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=32.95 E-value=5.2e+02 Score=25.95 Aligned_cols=43 Identities=14% Similarity=-0.001 Sum_probs=24.4
Q ss_pred HHHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHH
Q 014600 135 IFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIA 183 (422)
Q Consensus 135 l~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~ 183 (422)
+.+++.+.-.+.+-++... +++ ..+++|. .+.+.++++++..-
T Consensus 121 las~ssg~GE~tfL~lt~~----y~~-~~l~~ws-sGTG~aGl~Ga~~y 163 (402)
T PF02487_consen 121 LASLSSGLGEVTFLSLTHF----YGK-SSLSAWS-SGTGGAGLVGALYY 163 (402)
T ss_pred HHhhhhhhhHHHHHHHHHh----cCc-ccccccc-CCcChhhHHHHHHH
Confidence 4556666666666665432 322 3466665 45666677766544
No 282
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=29.02 E-value=1.1e+02 Score=24.44 Aligned_cols=26 Identities=27% Similarity=0.325 Sum_probs=18.0
Q ss_pred HHhhhhhhhhhhhhcccCCchhHHHH
Q 014600 70 IADGFATIFIGELIDRFGHFKIWHGA 95 (422)
Q Consensus 70 l~~ai~~p~~G~lsDr~Grrrp~ll~ 95 (422)
+...+....+||+.||+-.-.||-++
T Consensus 53 IsGilVGa~iG~llD~~agTsPwglI 78 (116)
T COG5336 53 ISGILVGAGIGWLLDKFAGTSPWGLI 78 (116)
T ss_pred HHHHHHHHHHHHHHHHhcCCCcHHHH
Confidence 33344556789999997777888654
No 283
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=28.76 E-value=75 Score=32.41 Aligned_cols=109 Identities=8% Similarity=0.107 Sum_probs=53.0
Q ss_pred CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCC-------chhHHHHHHHHHHHHHHHhhcCccCccccCCccchhhhH
Q 014600 55 GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGH-------FKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETI 127 (422)
Q Consensus 55 gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Gr-------rrp~ll~g~i~~~i~~~~lf~~~~p~~~~~~~~~~~~~~ 127 (422)
|.+..+.-+...+......+...+.|.++||+-| .|.=-+........+..+++. .|. .+. +..+..+
T Consensus 279 ~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~--~~~--~~~-~s~~~~~ 353 (493)
T KOG1330|consen 279 GFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFL--FPA--FTS-SSMIFGL 353 (493)
T ss_pred CCccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHH--HHh--hhh-HHHHHHH
Confidence 6554444445555566666777888999997432 222222333333333333331 231 111 1221111
Q ss_pred HHHHHHHHHHHHHH-HHHhhhhhhhhhccCCccchhhHHHHHHHHHH
Q 014600 128 SYCVFAAIFNVGWA-ATQVAHMSMVNCITLNSTSRVVLTSCRNAFTM 173 (422)
Q Consensus 128 ~~~~~~~l~~~~~~-~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ 173 (422)
.+ ++.+.... +...+..-+..+..+ ++.|+.+.++...+.-
T Consensus 354 il----~~~g~~~~~~~~a~n~~i~l~vV~-p~~Rt~a~a~~~~~~h 395 (493)
T KOG1330|consen 354 IL----FLVGETISWFNWATNNPIFLEVVP-PSRRTTAYALDTVFEH 395 (493)
T ss_pred HH----HHHHHHHHhcccccccceeeEecC-cccccHHHHHHHHHHH
Confidence 11 23333333 233444455566665 7889988887665443
No 284
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=28.73 E-value=5.7e+02 Score=25.75 Aligned_cols=38 Identities=11% Similarity=0.087 Sum_probs=30.0
Q ss_pred CChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHH
Q 014600 56 LSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWH 93 (422)
Q Consensus 56 ls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~l 93 (422)
-....-|.+-.+..+..++.....|++..+|.+...+.
T Consensus 282 ~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~ 319 (412)
T PF01770_consen 282 NESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGELA 319 (412)
T ss_pred CCcccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHH
Confidence 34556789999999999999999999977777655433
No 285
>PF13073 DUF3937: Protein of unknown function (DUF3937)
Probab=24.66 E-value=1e+02 Score=21.85 Aligned_cols=37 Identities=14% Similarity=0.273 Sum_probs=23.2
Q ss_pred HHhHHHHHHHHHHHHHHHHHHhhhHHHHHHhhhccCc
Q 014600 247 FKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRM 283 (422)
Q Consensus 247 ~~n~~f~~~~~~~~~~~~~~~~~~~y~~~y~~~~~~l 283 (422)
|+||...++.+..+.+-...+....|+-.|+....+.
T Consensus 2 f~nkklir~gltlfv~L~vi~FtigYfq~Yl~saagi 38 (73)
T PF13073_consen 2 FTNKKLIRFGLTLFVFLSVIDFTIGYFQTYLESAAGI 38 (73)
T ss_pred CccchhhhhhhHHHHHHHHHHhhHHHHHHHHHhccCC
Confidence 6788877655433333334455567888888776554
No 286
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=24.23 E-value=3.9e+02 Score=26.79 Aligned_cols=50 Identities=8% Similarity=-0.098 Sum_probs=34.8
Q ss_pred HHHHHHHHHhhhhhhhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 014600 136 FNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIV 186 (422)
Q Consensus 136 ~~~~~~~~~~p~~al~~~~t~~~~eR~~l~~~~~~~~~ig~~l~~~~~~~l 186 (422)
-|+.-++..+.....+.+-.+ ++||....+.....-.+|..+++.++.++
T Consensus 345 eGLlGGa~YVNtF~~I~~~~~-~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 345 EGLLGGASYVNTFYRISEEVP-PEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHhhhHHHHHHHHHHHhcCC-HHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 344455555555555666544 68899888888888888888888776554
No 287
>COG3088 CcmH Uncharacterized protein involved in biosynthesis of c-type cytochromes [Posttranslational modification, protein turnover, chaperones]
Probab=24.08 E-value=1.1e+02 Score=25.95 Aligned_cols=28 Identities=11% Similarity=0.013 Sum_probs=20.8
Q ss_pred HHHHHHHhhHhHHHHHHHHHHHHhccCC
Q 014600 382 SVTRFGLGLIPAICSLVSVAVTFTMKLH 409 (422)
Q Consensus 382 ~~i~~~~~~~P~i~~l~~~~~~~~y~l~ 409 (422)
.+..++....|.++.+++.++++.+.-.
T Consensus 102 ~~~T~lLW~~Pv~llllG~~~~~~~~rr 129 (153)
T COG3088 102 TGQTLLLWGLPVVLLLLGGVLLVRRARR 129 (153)
T ss_pred chhHHHHHHhHHHHHHHHHHHHHHHHhh
Confidence 4555666778999999999988765433
No 288
>cd01324 cbb3_Oxidase_CcoQ Cytochrome cbb oxidase CcoQ. Cytochrome cbb3 oxidase, the terminal oxidase in the respiratory chains of proteobacteria, is a multi-chain transmembrane protein located in the cell membrane. Like other cytochrome oxidases, it catalyzes the reduction of O2 and simultaneously pumps protons across the membrane. Found exclusively in proteobacteria, cbb3 is believed to be a modern enzyme that has evolved independently to perform a specialized function in microaerobic energy metabolism. The cbb3 operon contains four genes (ccoNOQP or fixNOQP), with ccoN coding for subunit I. Instead of a CuA-containing subunit II analogous to other cytochrome oxidases, cbb3 utilizes subunits ccoO and ccoP, which contain one and two hemes, respectively, to transfer electrons to the binuclear center. ccoQ, the fourth subunit, is a single transmembrane helix protein. It has been shown to protect the core complex from proteolytic degradation by serine proteases. See cd00919, cd01322
Probab=22.32 E-value=2.4e+02 Score=18.88 Aligned_cols=39 Identities=10% Similarity=-0.120 Sum_probs=22.5
Q ss_pred HHHHHHHHhhHhHHHHHHHHHHHHhccCCCcCchhhhhh
Q 014600 381 ISVTRFGLGLIPAICSLVSVAVTFTMKLHTPYSKPLVEP 419 (422)
Q Consensus 381 ~~~i~~~~~~~P~i~~l~~~~~~~~y~l~~~~~~~i~~~ 419 (422)
+.++.-..+++-.....++++..-+.|-+|++++|-.+-
T Consensus 7 lr~~a~~~~l~~~~~~Figiv~wa~~p~~k~~f~eaa~~ 45 (48)
T cd01324 7 LRGLADSWGLLYLALFFLGVVVWAFRPGRKKAFDEAANL 45 (48)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhHHHHHcC
Confidence 344444444433345555666556677888888776553
No 289
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=22.20 E-value=4.8e+02 Score=25.69 Aligned_cols=55 Identities=18% Similarity=0.124 Sum_probs=42.0
Q ss_pred CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHHHHHH-HHHHHHHHhhcC
Q 014600 55 GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSV-LVAVSFSSVFGG 110 (422)
Q Consensus 55 gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll~g~i-~~~i~~~~lf~~ 110 (422)
++.-..+|..+....++|++.+-+.|-++.+.||--+ ...|++ -........+|+
T Consensus 306 ~~Gv~~igf~m~cfgv~~Av~S~~~g~L~~~~gr~~~-~v~gavv~l~li~~~~~w~ 361 (390)
T KOG3097|consen 306 ALGVSRIGFAMACFGVGDAVASSLFGLLGKWIGRPPL-LVLGAVVHLLLITILFFWA 361 (390)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccH-HHHHHHHHHHHHHHHHhcc
Confidence 5667889999999999999999999999999999766 444443 334444555654
No 290
>COG3493 CitS Na+/citrate symporter [Energy production and conversion]
Probab=20.92 E-value=1.3e+02 Score=29.70 Aligned_cols=46 Identities=17% Similarity=0.159 Sum_probs=29.0
Q ss_pred HHHHHHHh-CCChhH-HHHHHHHHHHHhhhhhhhhhhhhcccCCchhHH
Q 014600 47 LLLFLTDI-GLSPRG-AAAVMLSGQIADGFATIFIGELIDRFGHFKIWH 93 (422)
Q Consensus 47 l~~f~t~~-gls~~~-~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~l 93 (422)
+..-|.+. |-++.+ .+.+..+.. ..-+...+.+.+.||.|+|||++
T Consensus 189 LS~iYs~itg~s~~~~~s~lipal~-igNvfAIi~aall~~iG~K~psl 236 (438)
T COG3493 189 LSEIYSSITGGSQEEYFSQLIPALT-IGNVFAIICAALLNKIGKKKPSL 236 (438)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHcccCCCc
Confidence 34456666 777654 444433333 33444567788899999999964
No 291
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=20.86 E-value=8.7e+02 Score=24.49 Aligned_cols=71 Identities=18% Similarity=0.183 Sum_probs=44.4
Q ss_pred eeeeeeeccchhHHHHHHHHHHHHHHHHHHh-CCChhHHHHHHHHHHHHhhhhhhhhhhhhcccCCchhHHH
Q 014600 24 WSVLYYGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHG 94 (422)
Q Consensus 24 ~~~~~y~~g~~~~~~~~~~~~~~l~~f~t~~-gls~~~~g~i~~i~~l~~ai~~p~~G~lsDr~Grrrp~ll 94 (422)
+.++..-.|.+.....--++..-...|+... |-|-..++.--.+-.....+..|+.|.+.|+.-|+|....
T Consensus 27 ~~~i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~ 98 (503)
T KOG2601|consen 27 STVIFLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQT 98 (503)
T ss_pred ceeehhhHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHH
Confidence 3333333444444444445555567777777 7555555555555555666788999999999888877543
No 292
>COG0679 Predicted permeases [General function prediction only]
Probab=20.79 E-value=7.4e+02 Score=23.63 Aligned_cols=24 Identities=13% Similarity=0.015 Sum_probs=16.7
Q ss_pred chhhhHHHHHHhHHHHHHHHHHHH
Q 014600 238 HARISWAYWFKKILYYQVALVYML 261 (422)
Q Consensus 238 ~~~~~~~~~~~n~~f~~~~~~~~~ 261 (422)
..++..|++++||..+-..+...+
T Consensus 157 ~~~~~~~~~~~nP~i~a~i~g~~~ 180 (311)
T COG0679 157 SLLSVLKKLLTNPLIIALILGLLL 180 (311)
T ss_pred HHHHHHHHHHhCcHHHHHHHHHHH
Confidence 456677899999998765544443
No 293
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=20.79 E-value=33 Score=35.88 Aligned_cols=61 Identities=16% Similarity=0.261 Sum_probs=0.0
Q ss_pred eeeeccchhHHHHHHHHHHHHHHHHHHh-CCChhHHHHHHHHHHH-HhhhhhhhhhhhhcccC
Q 014600 27 LYYGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQI-ADGFATIFIGELIDRFG 87 (422)
Q Consensus 27 ~~y~~g~~~~~~~~~~~~~~l~~f~t~~-gls~~~~g~i~~i~~l-~~ai~~p~~G~lsDr~G 87 (422)
+...++............+|+|.|+... +++++.+.++..+..+ ..++...+.|++..|+.
T Consensus 308 ~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~k 370 (539)
T PF03137_consen 308 MCLILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFK 370 (539)
T ss_dssp ---------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEec
Confidence 3444444444555555678999999887 9999999988876666 55667778899998753
No 294
>PF05545 FixQ: Cbb3-type cytochrome oxidase component FixQ; InterPro: IPR008621 This family consists of several Cbb3-type cytochrome oxidase components (FixQ/CcoQ). FixQ is found in nitrogen fixing bacteria. Since nitrogen fixation is an energy-consuming process, effective symbioses depend on operation of a respiratory chain with a high affinity for O2, closely coupled to ATP production. This requirement is fulfilled by a special three-subunit terminal oxidase (cytochrome terminal oxidase cbb3), which was first identified in Bradyrhizobium japonicum as the product of the fixNOQP operon [].
Probab=20.18 E-value=2.6e+02 Score=18.47 Aligned_cols=24 Identities=0% Similarity=-0.089 Sum_probs=12.0
Q ss_pred HHHHHHHHHHhccCCCcCchhhhh
Q 014600 395 CSLVSVAVTFTMKLHTPYSKPLVE 418 (422)
Q Consensus 395 ~~l~~~~~~~~y~l~~~~~~~i~~ 418 (422)
...++++...+.|-+|++.|+-.+
T Consensus 20 ~~F~gi~~w~~~~~~k~~~e~aa~ 43 (49)
T PF05545_consen 20 VFFIGIVIWAYRPRNKKRFEEAAN 43 (49)
T ss_pred HHHHHHHHHHHcccchhhHHHHHc
Confidence 334444444344555666666544
Done!