BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014603
(422 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3PDX|A Chain A, Crystal Structural Of Mouse Tyrosine Aminotransferase
Length = 402
Score = 275 bits (702), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 140/392 (35%), Positives = 222/392 (56%), Gaps = 7/392 (1%)
Query: 28 VRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTV 87
+R +++++ N N T +I L GDP+ F + T A+ ++ S ++N Y+ ++
Sbjct: 16 IRAIVDNMKVKPNPNKT--VISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAPSI 73
Query: 88 GILPARRAIADYLN-RDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPY 146
G L +R +A Y + + P L DV LT GC+QAIE+ L VLA PG NIL+PRPGF
Sbjct: 74 GYLSSREEVASYYHCPEAP--LEAKDVILTSGCSQAIELCLAVLANPGQNILIPRPGFSL 131
Query: 147 YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQ 206
Y A +EV+ ++LLP K WE+DL +E+L DE T LV+ NP NPCG+V++ +HLQ
Sbjct: 132 YRTLAESMGIEVKLYNLLPEKSWEIDLKQLESLIDEKTACLVVNNPSNPCGSVFSKRHLQ 191
Query: 207 KIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGW 266
KI A++ + ++ADE+Y + F + + PM + VP+L+ G ++ RW+VPGWRLGW
Sbjct: 192 KILAVAERQCVPILADEIYGDMVFSDCKYEPMATLSTNVPILSCGGLAXRWLVPGWRLGW 251
Query: 267 LVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETA 326
++ D I + I D + P T +QGA+ IL++T +EF+ L+ A
Sbjct: 252 ILIHDRRDIFGNE-IRDGLVKLSQRILGPCTIVQGALKSILQRTPQEFYQDTLSFLKSNA 310
Query: 327 DICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGIT 386
D+C L IP + P +P G+M++MV + +D+EF +L E+SV LP
Sbjct: 311 DLCYGALSAIPGLQ-PVRPSGAMYLMVGIEMEHFPEFENDVEFTERLIAEQSVHCLPATC 369
Query: 387 VGLKDWLRITFAVEPSALEDGLGRMKAFYDRH 418
++ R+ V + + R++ F ++H
Sbjct: 370 FEYPNFFRVVITVPEVMMLEACSRIQEFCEQH 401
>pdb|3DYD|A Chain A, Human Tyrosine Aminotransferase
pdb|3DYD|B Chain B, Human Tyrosine Aminotransferase
Length = 427
Score = 270 bits (690), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 139/392 (35%), Positives = 221/392 (56%), Gaps = 7/392 (1%)
Query: 28 VRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTV 87
+R +++++ N N T +I L GDP+ F + T A+ ++ S ++N Y+ ++
Sbjct: 39 IRAIVDNMKVKPNPNKT--MISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAPSI 96
Query: 88 GILPARRAIADYLN-RDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPY 146
G L +R IA Y + + P L DV LT GC+QAI++ L VLA PG NIL+PRPGF
Sbjct: 97 GFLSSREEIASYYHCPEAP--LEAKDVILTSGCSQAIDLCLAVLANPGQNILVPRPGFSL 154
Query: 147 YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQ 206
Y+ A +EV+ ++LLP K WE+DL +E L DE T L++ NP NPCG+V++ +HLQ
Sbjct: 155 YKTLAESMGIEVKLYNLLPEKSWEIDLKQLEYLIDEKTACLIVNNPSNPCGSVFSKRHLQ 214
Query: 207 KIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGW 266
KI A + + ++ADE+Y + F + + P+ + VP+L+ G ++KRW+VPGWRLGW
Sbjct: 215 KILAVAARQCVPILADEIYGDMVFSDCKYEPLATLSTDVPILSCGGLAKRWLVPGWRLGW 274
Query: 267 LVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETA 326
++ D I + I D + P T +QGA+ IL +T EF+ L+ A
Sbjct: 275 ILIHDRRDIFGNE-IRDGLVKLSQRILGPCTIVQGALKSILCRTPGEFYHNTLSFLKSNA 333
Query: 327 DICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGIT 386
D+C L IP + P +P G+M++MV + +D+EF +L E+SV LP
Sbjct: 334 DLCYGALAAIPGLR-PVRPSGAMYLMVGIEMEHFPEFENDVEFTERLVAEQSVHCLPATC 392
Query: 387 VGLKDWLRITFAVEPSALEDGLGRMKAFYDRH 418
+++R+ V + + R++ F ++H
Sbjct: 393 FEYPNFIRVVITVPEVMMLEACSRIQEFCEQH 424
>pdb|1BW0|A Chain A, Crystal Structure Of Tyrosine Aminotransferase From
Trypanosoma Cruzi
pdb|1BW0|B Chain B, Crystal Structure Of Tyrosine Aminotransferase From
Trypanosoma Cruzi
Length = 416
Score = 189 bits (481), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 117/386 (30%), Positives = 195/386 (50%), Gaps = 15/386 (3%)
Query: 45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDL 104
+P+I L GDP+ + T++ + + ++ S N Y TVG AR A+A +
Sbjct: 33 KPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFPTVGSPEAREAVATWWRNSF 92
Query: 105 PYK------LSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEV 158
+K + D+V L G + I + +T + G L+P+PGFP+YE + +
Sbjct: 93 VHKEELKSTIVKDNVVLCSGGSHGILMAITAICDAGDYALVPQPGFPHYETVCKAYGIGM 152
Query: 159 RHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIM 218
++ P WE DLD + L D+ T L++ NP NPCG+ ++ +H++ I A++L +
Sbjct: 153 HFYNCRPENDWEADLDEIRRLKDDKTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLP 212
Query: 219 VIADEVYDHLAFG----NTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNG 274
+ +DE+Y + F N F + F + VP + LG + +VPGWRLGWL+ DP+G
Sbjct: 213 LFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAXNLVVPGWRLGWLLYVDPHG 272
Query: 275 ILQDSGIVDSIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLK 334
++ +K + P T +Q A+ + L T +E +I + E+A + +
Sbjct: 273 --NGPSFLEGLKRVGMLVCGPCTVVQAALGEALLNTPQEHLDQIVAKIEESAMYLYNHIG 330
Query: 335 EIPCI-TCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWL 393
E CI P P G+M++M +++ I +D+EF KL +EE+V VLPG +
Sbjct: 331 E--CIGLAPTMPRGAMYLMSRIDLEKYRDIKTDVEFFEKLLEEENVQVLPGTIFHAPGFT 388
Query: 394 RITFAVEPSALEDGLGRMKAFYDRHA 419
R+T + + R+KAF RHA
Sbjct: 389 RLTTTRPVEVYREAVERIKAFCQRHA 414
>pdb|1XI9|A Chain A, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|B Chain B, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|C Chain C, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|D Chain D, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
Length = 406
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/377 (27%), Positives = 170/377 (45%), Gaps = 12/377 (3%)
Query: 47 LIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPY 106
+I L GDP F F+ +A +++ N Y + G+ R+AI + R
Sbjct: 40 VIRLNIGDPVKF-DFQPPEHMKEAYCKAIKEGH-NYYGDSEGLPELRKAIVEREKRKNGV 97
Query: 107 KLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPA 166
++PDDV +T T+A+++I L PG IL+P P +P Y + + +
Sbjct: 98 DITPDDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEE 157
Query: 167 KGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYD 226
+ W+ D+D + + T A+ +INP NP G +Y + L++I A + I VI+DE+YD
Sbjct: 158 EDWQPDIDDIRKKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYD 217
Query: 227 HLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIK 286
+ + P G VPV+ + +SK + GWRLG++ DP L S + ++I
Sbjct: 218 LMTYEGEHISP-GSLTKDVPVIVMNGLSKVYFATGWRLGYMYFVDPENKL--SEVREAID 274
Query: 287 SFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPE 346
I P T Q A L ++ + L+E D RL EIP I+ KP+
Sbjct: 275 RLARIRLCPNTPAQFAAIAGL-TGPMDYLKEYMKKLKERRDYIYKRLNEIPGIST-TKPQ 332
Query: 347 GSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAVEPSAL 404
G+ ++ K+ + +D EF L + V+ + G G R F L
Sbjct: 333 GAFYIFPKIEVGPWK---NDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFLPPIEIL 389
Query: 405 EDGLGRMKAFYDRHAKK 421
E+ + R + F K+
Sbjct: 390 EEAMDRFEKFMKERLKE 406
>pdb|1O4S|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1255)
From Thermotoga Maritima At 1.90 A Resolution
pdb|1O4S|B Chain B, Crystal Structure Of Aspartate Aminotransferase (Tm1255)
From Thermotoga Maritima At 1.90 A Resolution
Length = 389
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 161/356 (45%), Gaps = 21/356 (5%)
Query: 59 PSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLG 118
P F T V+ V ++ Y+ GI R IA + +SPD V +T G
Sbjct: 51 PDFPTPEPVVEEAVRFLQKGEVK-YTDPRGIYELREGIAKRIGERYKKDISPDQVVVTNG 109
Query: 119 CTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEA 178
QA+ L PG +++ P + Y + + V + +K ++ L+ VE
Sbjct: 110 AKQALFNAFMALLDPGDEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEG 169
Query: 179 LADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPM 238
L T A++I +P NP G VY + L+ + AKK +I+DEVYD L + + +
Sbjct: 170 LLVGKTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSIL 229
Query: 239 GVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATF 298
V ++ + SK + GWR+G+L++S+ + + V I+S + +S T
Sbjct: 230 DVSEGFDRIVYINGFSKSHSMTGWRVGYLISSE-----KVATAVSKIQS--HTTSCINTV 282
Query: 299 IQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYS 358
Q A + LE S + +E + +RLK++ +PEG+ ++ K+
Sbjct: 283 AQYAALKALEVDN----SYMVQTFKERKNFVVERLKKMGVKFV--EPEGAFYLFFKVR-- 334
Query: 359 LLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALEDGLGRMKAF 414
D++F +L +E+ V ++PG ++R++FA L + L R++ F
Sbjct: 335 -----GDDVKFCERLLEEKKVALVPGSAFLKPGFVRLSFATSIERLTEALDRIEDF 385
>pdb|1GDE|A Chain A, Crystal Structure Of Pyrococcus Protein A-1 E-form
pdb|1GDE|B Chain B, Crystal Structure Of Pyrococcus Protein A-1 E-form
pdb|1GD9|A Chain A, Crystall Structure Of Pyrococcus Protein-A1
pdb|1GD9|B Chain B, Crystall Structure Of Pyrococcus Protein-A1
Length = 389
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 182/378 (48%), Gaps = 33/378 (8%)
Query: 45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDL 104
+ +I LG G+P A +A+ + Y +G+L R AIA+ L +
Sbjct: 26 KDVISLGIGEPDFDTPQHIKEYAKEALDKGL-----THYGPNIGLLELREAIAEKLKKQN 80
Query: 105 PYKLSPD-DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEAR---ATHSHLEVRH 160
+ P ++ + LG QA + L+ + G +L+P P F Y A +EV
Sbjct: 81 GIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPT 140
Query: 161 FDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVI 220
++ + +++D ++ + T AL+I +P NP G V T + L++IA+ + ++VI
Sbjct: 141 YE---EDEFRLNVDELKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVI 197
Query: 221 ADEVYDHLAFGNTPFVPMGVF-GSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDS 279
+DEVY+H + + + G +T+ SK + + GWRLG++ P+ I++
Sbjct: 198 SDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAA--PSWIIE-- 253
Query: 280 GIVDSIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRE---TADICCDRLKEI 336
+K + ++ P TFIQ A + L+ +E + + ++ +E + RL E+
Sbjct: 254 ---RMVKFQMYNATCPVTFIQYAAAKALK--DERSWKAVEEMRKEYDRRRKLVWKRLNEM 308
Query: 337 PCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL--KDWLR 394
T KP+G+ ++ ++ + G+ S +F+ + KE V V+PG G + ++R
Sbjct: 309 GLPTV--KPKGAFYIFPRIRDT---GLTSK-KFSELMLKEARVAVVPGSAFGKAGEGYVR 362
Query: 395 ITFAVEPSALEDGLGRMK 412
I++A LE+ + RM+
Sbjct: 363 ISYATAYEKLEEAMDRME 380
>pdb|1DJU|A Chain A, Crystal Structure Of Aromatic Aminotransferase From
Pyrococcus Horikoshii Ot3
pdb|1DJU|B Chain B, Crystal Structure Of Aromatic Aminotransferase From
Pyrococcus Horikoshii Ot3
Length = 388
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 182/378 (48%), Gaps = 33/378 (8%)
Query: 45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDL 104
+ +I LG G+P A +A+ + Y +G+L R AIA+ L +
Sbjct: 25 KDVISLGIGEPDFDTPQHIKEYAKEALDKGL-----THYGPNIGLLELREAIAEKLKKQN 79
Query: 105 PYKLSPD-DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEAR---ATHSHLEVRH 160
+ P ++ + LG QA + L+ + G +L+P P F Y A +EV
Sbjct: 80 GIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPT 139
Query: 161 FDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVI 220
++ + +++D ++ + T AL+I +P NP G V T + L++IA+ + ++VI
Sbjct: 140 YE---EDEFRLNVDELKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVI 196
Query: 221 ADEVYDHLAFGNTPFVPMGVF-GSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDS 279
+DEVY+H + + + G +T+ SK + + GWRLG++ P+ I++
Sbjct: 197 SDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAA--PSWIIE-- 252
Query: 280 GIVDSIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRE---TADICCDRLKEI 336
+K + ++ P TFIQ A + L+ +E + + ++ +E + RL E+
Sbjct: 253 ---RMVKFQMYNATCPVTFIQYAAAKALK--DERSWKAVEEMRKEYDRRRKLVWKRLNEM 307
Query: 337 PCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL--KDWLR 394
T KP+G+ ++ ++ + G+ S +F+ + KE V V+PG G + ++R
Sbjct: 308 GLPTV--KPKGAFYIFPRIRDT---GLTSK-KFSELMLKEARVAVVPGSAFGKAGEGYVR 361
Query: 395 ITFAVEPSALEDGLGRMK 412
I++A LE+ + RM+
Sbjct: 362 ISYATAYEKLEEAMERME 379
>pdb|1V2D|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
pdb|1V2E|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With A-Keto-G-Methylthiobutyrate
pdb|1V2E|B Chain B, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With A-Keto-G-Methylthiobutyrate
pdb|1V2F|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With 3-Phenylpropionate
pdb|1V2F|B Chain B, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With 3-Phenylpropionate
Length = 381
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 107/376 (28%), Positives = 165/376 (43%), Gaps = 55/376 (14%)
Query: 50 LGHGDPSAFPSFRTASVAVDAIVHSVRSA--RFNCYSSTVGILPARRAIADYLNRDLPYK 107
LG G PS P ++ +VR A R + Y+ G+ R A+A+ +
Sbjct: 30 LGQGFPSNPPP--------PFLLEAVRRALGRQDQYAPPAGLPALREALAEE------FA 75
Query: 108 LSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVR--HFDLLP 165
+ P+ V +T G T+A+ V+L L PG +++ P F Y A + + R DL P
Sbjct: 76 VEPESVVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLPDAFLAGAKARLVRLDLTP 135
Query: 166 AKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVY 225
+G+ +DL A+E T AL++ P NP G V+ + L+ IA A+ + +I+DEVY
Sbjct: 136 -EGFRLDLSALEKALTPRTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVY 194
Query: 226 DHLAFGNTP-----FVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSG 280
D L +G P F P F T+GS KR G+R+GW+V P +
Sbjct: 195 DELYYGERPRRLREFAPERTF-------TVGSAGKRLEATGYRVGWIV--GPKEFMPRLA 245
Query: 281 IVDSIKSFLNISSDPATFIQGAVPQILEKTEEE-FFSKITDILRETADICCDRLKEIPCI 339
+ SF S P T +Q V + L+ E F+ + + R D+ L+ +
Sbjct: 246 GMRQWTSF----SAP-TPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGGLRAMGLR 300
Query: 340 TCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL----KDWLRI 395
PEG+ F+M +L G + A +L +E V ++P L KD R
Sbjct: 301 VY--VPEGTYFLMAELP-----GWD-----AFRLVEEARVALIPASAFYLEDPPKDLFRF 348
Query: 396 TFAVEPSALEDGLGRM 411
F L L R+
Sbjct: 349 AFCKTEEELHLALERL 364
>pdb|1J32|A Chain A, Aspartate Aminotransferase From Phormidium Lapideum
pdb|1J32|B Chain B, Aspartate Aminotransferase From Phormidium Lapideum
Length = 388
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 156/362 (43%), Gaps = 24/362 (6%)
Query: 59 PSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLG 118
P F T V+A ++ + Y G R AIA L RD D++ +T G
Sbjct: 40 PDFNTPKHIVEAAKAALEQGKTR-YGPAAGEPRLREAIAQKLQRDNGLCYGADNILVTNG 98
Query: 119 CTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEA 178
Q+I ++ + PG +++P P + Y + ++V + +
Sbjct: 99 GKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQ 158
Query: 179 LADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPM 238
T LV P NP G VYT ++ IA+ A + G+ V++DE+Y+ + + + + +
Sbjct: 159 AITPKTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSI 218
Query: 239 GVFG--SIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI----S 292
G + + +K + + GWR+G+L +G V +K+ I +
Sbjct: 219 GAASPEAYERSVVCSGFAKTYAMTGWRVGFL-----------AGPVPLVKAATKIQGHST 267
Query: 293 SDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVM 352
S+ TF Q E + ++ ++ E D L +P + CP KP+G+ ++
Sbjct: 268 SNVCTFAQYGAIAAYENS-QDCVQEMLAAFAERRRYMLDALNAMPGLECP-KPDGAFYMF 325
Query: 353 VKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALEDGLGRMK 412
S+ + S ++F +L + V +PG G D +R+++A + ++ G+ R++
Sbjct: 326 P----SIAKTGRSSLDFCSELLDQHQVATVPGAAFGADDCIRLSYATDLDTIKRGMERLE 381
Query: 413 AF 414
F
Sbjct: 382 KF 383
>pdb|1U08|A Chain A, Crystal Structure And Reactivity Of Ybdl From Escherichia
Coli Identify A Methionine Aminotransferase Function.
pdb|1U08|B Chain B, Crystal Structure And Reactivity Of Ybdl From Escherichia
Coli Identify A Methionine Aminotransferase Function
Length = 386
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 156/367 (42%), Gaps = 33/367 (8%)
Query: 58 FPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPD-DVYLT 116
FP F + + H V N Y+ G+ R AIA R Y+ D D+ +T
Sbjct: 39 FPDFDGPRYLQERLAHHVAQGA-NQYAPMTGVQALREAIAQKTERLYGYQPDADSDITVT 97
Query: 117 LGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAV 176
G T+A+ +T L R G ++ P + Y S V+ L P + VD
Sbjct: 98 AGATEALYAAITALVRNGDEVICFDPSYDSYAPAIALSGGIVKRMALQPPH-FRVDWQEF 156
Query: 177 EALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFV 236
AL E T +++ P NP V+ + + I VI+DEVY+H+ F
Sbjct: 157 AALLSERTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHA 216
Query: 237 PMGVFGSIVP-VLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDP 295
+ + + + S K + + GW++G+ V P S + + +L S +
Sbjct: 217 SVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAPAPI-----SAEIRKVHQYLTFSVN- 270
Query: 296 ATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKE-----IPCITCPKKPEGSMF 350
T Q A+ +L + E E + + D R+ DI + L E +PC EG+ F
Sbjct: 271 -TPAQLALADML-RAEPEHYLALPDFYRQKRDILVNALNESRLEILPC-------EGTYF 321
Query: 351 VMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKD-----WLRITFAVEPSALE 405
++V +YS + ++ D+EF L +E V +P ++V D +R+ FA + S L
Sbjct: 322 LLV--DYSAVSTLD-DVEFCQWLTQEHGVAAIP-LSVFCADPFPHKLIRLCFAKKESTLL 377
Query: 406 DGLGRMK 412
R++
Sbjct: 378 AAAERLR 384
>pdb|1B5O|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Single
Mutant 1
pdb|1B5O|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Single
Mutant 1
Length = 385
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 145/339 (42%), Gaps = 22/339 (6%)
Query: 83 YSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRP 142
Y+ GI R A+A+ R+ ++P++ +T+G +QA+ + + PG +++ P
Sbjct: 64 YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSP 123
Query: 143 GFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTY 202
+ Y + V + LP +G+ D + V T ALV+ +P NP G VY
Sbjct: 124 YWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPK 183
Query: 203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP--VLTLGSISKRWIVP 260
+ L+ +A A + +++DE+Y+HL + F P G + P LT+ +K + +
Sbjct: 184 EVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAKAFAMT 239
Query: 261 GWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQGAVPQILEKTE--EEFFSKI 318
GWR+G+ P +++ V S ++ P T Q A + L E F
Sbjct: 240 GWRIGY--ACGPKEVIKAMASVSS-----QSTTSPDTIAQWATLEALTNQEASRAFVEMA 292
Query: 319 TDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEES 378
+ R D+ + L + +P G+ +V++ + I D A + E
Sbjct: 293 REAYRRRRDLLLEGLTALGLKAV--RPSGAFYVLMDTS-----PIAPDEVRAAERLLEAG 345
Query: 379 VIVLPGITVGLKDWLRITFAVEPSALEDGLGRMKAFYDR 417
V V+PG +R+++A L L R R
Sbjct: 346 VAVVPGTDFAAFGHVRLSYATSEENLRKALERFARVLGR 384
>pdb|3ELE|A Chain A, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|B Chain B, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|C Chain C, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|D Chain D, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
Length = 398
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 89/388 (22%), Positives = 165/388 (42%), Gaps = 52/388 (13%)
Query: 53 GDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDD 112
G+PS P+ + + + +V S + Y+S G + R AIA++LN + D+
Sbjct: 43 GNPS-IPAPQIVNDTIKELVTDYDSVALHGYTSAQGDVETRAAIAEFLNNTHGTHFNADN 101
Query: 113 VYLTLGCTQAIEVILTVLARPGANILLP-RPGFPYYE-------ARATHSHLEVRHFDLL 164
+Y T G ++ + L + + P FP Y+ AR + HF
Sbjct: 102 LYXTXGAAASLSICFRALTSDAYDEFITIAPYFPEYKVFVNAAGARLVEVPADTEHF--- 158
Query: 165 PAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAE----TAKKLG--IM 218
++D DA+E + +T ++I +P NP G VY+ + ++K+++ +K++G I
Sbjct: 159 -----QIDFDALEERINAHTRGVIINSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIF 213
Query: 219 VIADEVYDHLAFG--NTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGIL 276
+IADE Y + + PFV ++V S SK +PG R+G+++ D
Sbjct: 214 IIADEPYREIVYDGIKVPFVTKYYDNTLVCY----SYSKSLSLPGERIGYVLVPDE---- 265
Query: 277 QDSGIVDSIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDI--LRETADICCDRLK 334
+ D + + + P + +K + DI +E D+ + L
Sbjct: 266 ----VYDKAELYAAVCGAGRALGYVCAPSLFQKXIVKCQGATGDINAYKENRDLLYEGLT 321
Query: 335 EI--PCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDW 392
I C KP+G+ + VK + D + AKEE V+++ G W
Sbjct: 322 RIGYHCF----KPDGAFYXFVK-------ALEDDSNAFCEKAKEEDVLIVAADGFGCPGW 370
Query: 393 LRITFAVEPSALEDGLGRMKAFYDRHAK 420
+RI++ V+ ++ + Y ++ K
Sbjct: 371 VRISYCVDREXIKHSXPAFEKIYKKYNK 398
>pdb|1BKG|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|B Chain B, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|C Chain C, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|D Chain D, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
Length = 385
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 144/339 (42%), Gaps = 22/339 (6%)
Query: 83 YSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRP 142
Y+ GI R A+A+ R+ ++P++ +T+G QA+ + + PG +++ P
Sbjct: 64 YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGKQALFNLFQAILDPGDEVIVLSP 123
Query: 143 GFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTY 202
+ Y + V + LP +G+ D + V T ALV+ +P NP G VY
Sbjct: 124 YWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPK 183
Query: 203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP--VLTLGSISKRWIVP 260
+ L+ +A A + +++DE+Y+HL + F P G + P LT+ +K + +
Sbjct: 184 EVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAKAFAMT 239
Query: 261 GWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQGAVPQILEKTE--EEFFSKI 318
GWR+G+ P +++ V S ++ P T Q A + L E F
Sbjct: 240 GWRIGY--ACGPKEVIKAMASVSS-----QSTTSPDTIAQWATLEALTNQEASRAFVEMA 292
Query: 319 TDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEES 378
+ R D+ + L + +P G+ +V++ + I D A + E
Sbjct: 293 REAYRRRRDLLLEGLTALGLKAV--RPSGAFYVLMDTS-----PIAPDEVRAAERLLEAG 345
Query: 379 VIVLPGITVGLKDWLRITFAVEPSALEDGLGRMKAFYDR 417
V V+PG +R+++A L L R R
Sbjct: 346 VAVVPGTDFAAFGHVRLSYATSEENLRKALERFARVLGR 384
>pdb|5BJ3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
Length = 385
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 146/343 (42%), Gaps = 30/343 (8%)
Query: 83 YSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRP 142
Y+ GI R A+A+ R+ ++P++ +T+G +QA+ + + PG +++ P
Sbjct: 64 YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSP 123
Query: 143 GFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTY 202
+ Y + V + LP +G+ D + V T ALV+ +P NP G VY
Sbjct: 124 YWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPK 183
Query: 203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP--VLTLGSISKRWIVP 260
+ L+ +A A + +++DE+Y+HL + F P G + P LT+ +K + +
Sbjct: 184 EVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAKAFAMT 239
Query: 261 GWRLGWLVTSDPNGILQDSGIVDSIKSFLNIS----SDPATFIQGAVPQILEKTE--EEF 314
GWR+G+ G + IK+ ++S + P T Q A + L E F
Sbjct: 240 GWRIGYAC-----------GPKEVIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAF 288
Query: 315 FSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLA 374
+ R D+ + L + +P G+ +V++ + I D A +
Sbjct: 289 VEMAREAYRRRRDLLLEGLTALGLKAV--RPSGAFYVLMDTS-----PIAPDEVRAAERL 341
Query: 375 KEESVIVLPGITVGLKDWLRITFAVEPSALEDGLGRMKAFYDR 417
E V V+PG +R+++A L L R R
Sbjct: 342 LEAGVAVVPGTDFAAFGHVRLSYATSEENLRKALERFARVLGR 384
>pdb|1GC3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|E Chain E, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|F Chain F, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|G Chain G, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|H Chain H, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC4|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|5BJ4|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2
pdb|5BJ4|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2
Length = 385
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 146/343 (42%), Gaps = 30/343 (8%)
Query: 83 YSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRP 142
Y+ GI R A+A+ R+ ++P++ +T+G +QA+ + + PG +++ P
Sbjct: 64 YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSP 123
Query: 143 GFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTY 202
+ Y + V + LP +G+ D + V T ALV+ +P NP G VY
Sbjct: 124 YWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPK 183
Query: 203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP--VLTLGSISKRWIVP 260
+ L+ +A A + +++DE+Y+HL + F P G + P LT+ +K + +
Sbjct: 184 EVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAKAFAMT 239
Query: 261 GWRLGWLVTSDPNGILQDSGIVDSIKSFLNIS----SDPATFIQGAVPQILEKTE--EEF 314
GWR+G+ G + IK+ ++S + P T Q A + L E F
Sbjct: 240 GWRIGYAC-----------GPKEVIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAF 288
Query: 315 FSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLA 374
+ R D+ + L + +P G+ +V++ + I D A +
Sbjct: 289 VEMAREAYRRRRDLLLEGLTALGLKAV--RPSGAFYVLMDTS-----PIAPDEVRAAERL 341
Query: 375 KEESVIVLPGITVGLKDWLRITFAVEPSALEDGLGRMKAFYDR 417
E V V+PG +R+++A L L R R
Sbjct: 342 LEAGVAVVPGTDFAAFGHVRLSYATSEENLRKALERFARVLGR 384
>pdb|1GCK|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1 Complexed With Aspartate
pdb|1GCK|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1 Complexed With Aspartate
pdb|1B5P|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1
pdb|1B5P|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1
Length = 385
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 146/343 (42%), Gaps = 30/343 (8%)
Query: 83 YSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRP 142
Y+ GI R A+A+ R+ ++P++ +T+G +QA+ + + PG +++ P
Sbjct: 64 YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSP 123
Query: 143 GFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTY 202
+ Y + V + LP +G+ D + V T ALV+ +P NP G VY
Sbjct: 124 YWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPK 183
Query: 203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP--VLTLGSISKRWIVP 260
+ L+ +A A + +++DE+Y+HL + F P G + P LT+ +K + +
Sbjct: 184 EVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAKAFAMT 239
Query: 261 GWRLGWLVTSDPNGILQDSGIVDSIKSFLNIS----SDPATFIQGAVPQILEKTE--EEF 314
GWR+G+ G + IK+ ++S + P T Q A + L E F
Sbjct: 240 GWRIGYAC-----------GPKEVIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAF 288
Query: 315 FSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLA 374
+ R D+ + L + +P G+ +V++ + I D A +
Sbjct: 289 VEMAREAYRRRRDLLLEGLTALGLKAV--RPSGAFYVLMDTS-----PIAPDEVRAAERL 341
Query: 375 KEESVIVLPGITVGLKDWLRITFAVEPSALEDGLGRMKAFYDR 417
E V V+PG +R+++A L L R R
Sbjct: 342 LEAGVAVVPGTDFAAFGHVRLSYATSEENLRKALERFARVLGR 384
>pdb|1BJW|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus
pdb|1BJW|B Chain B, Aspartate Aminotransferase From Thermus Thermophilus
Length = 382
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 142/333 (42%), Gaps = 22/333 (6%)
Query: 83 YSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRP 142
Y+ GI R A+A+ R+ ++P++ +T+G QA+ + + PG +++ P
Sbjct: 64 YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGKQALFNLFQAILDPGDEVIVLSP 123
Query: 143 GFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTY 202
+ Y + V + LP +G+ D + V T ALV+ +P NP G VY
Sbjct: 124 YWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPK 183
Query: 203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP--VLTLGSISKRWIVP 260
+ L+ +A A + +++DE+Y+HL + F P G + P LT+ + + +
Sbjct: 184 EVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAXAFAMT 239
Query: 261 GWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQGAVPQILEKTE--EEFFSKI 318
GWR+G+ P +++ V S ++ P T Q A + L E F
Sbjct: 240 GWRIGY--ACGPKEVIKAMASVSS-----QSTTSPDTIAQWATLEALTNQEASRAFVEMA 292
Query: 319 TDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEES 378
+ R D+ + L + +P G+ +V++ + I D A + E
Sbjct: 293 REAYRRRRDLLLEGLTALGLKAV--RPSGAFYVLMDTS-----PIAPDEVRAAERLLEAG 345
Query: 379 VIVLPGITVGLKDWLRITFAVEPSALEDGLGRM 411
V V+PG +R+++A L L R
Sbjct: 346 VAVVPGTDFAAFGHVRLSYATSEENLRKALERF 378
>pdb|2Z61|A Chain A, Crystal Structure Of Mj0684 From Methanococcus Jannaschii
Reveals Its Similarity In The Active Site To Kynurenine
Aminotransferases
Length = 370
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 164/365 (44%), Gaps = 39/365 (10%)
Query: 59 PSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLG 118
P F T VD + S++ + + Y+ + GIL R I++ + PD++ +T G
Sbjct: 39 PDFNTPKPIVDEGIKSLKEGKTH-YTDSRGILELREKISELYKDKYKADIIPDNIIITGG 97
Query: 119 CTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDL--DAV 176
+ + L+ + G +L+ P +P Y+ L AK D +++
Sbjct: 98 SSLGLFFALSSIIDDGDEVLIQNPCYPCYK----------NFIRFLGAKPVFCDFTVESL 147
Query: 177 EALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFV 236
E + T A++I +P NP G V ++I E A + +I+DE+Y+ L + +
Sbjct: 148 EEALSDKTKAIIINSPSNPLGEVID----REIYEFAYENIPYIISDEIYNGLVYEGKCYS 203
Query: 237 PMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSI-KSFLNISSDP 295
+ ++ + + S + + GWR+G+++++D I+++I K N+
Sbjct: 204 AIEFDENLEKTILINGFSXLYAMTGWRIGYVISNDE--------IIEAILKLQQNLFISA 255
Query: 296 ATFIQGAVPQILEK-TEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVK 354
T Q A + EK TE E S I + R + +K+ P G+ +V
Sbjct: 256 PTISQYAALKAFEKETEREINSMIKEFDRRRR-LVLKYVKDFGWEV--NNPIGAYYVFPN 312
Query: 355 LNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAVEPSALEDGLGRMK 412
+ EFA KL KE+ V + PGI G K+++RI++A +++GL R+K
Sbjct: 313 IG-------EDGREFAYKLLKEKFVALTPGIGFGSKGKNYIRISYANSYENIKEGLERIK 365
Query: 413 AFYDR 417
F ++
Sbjct: 366 EFLNK 370
>pdb|2GB3|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|B Chain B, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|C Chain C, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|D Chain D, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|E Chain E, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|F Chain F, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
Length = 409
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 128/287 (44%), Gaps = 40/287 (13%)
Query: 83 YSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRP 142
YS + GI R A A Y R + P++V +T G ++AI V+A PG IL+ P
Sbjct: 75 YSHSAGIWELREAFASYYKRRQRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEP 134
Query: 143 GFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTY 202
+ Y A A + +++ +G+ + + +E+ +E T +V+ NP NP G VY
Sbjct: 135 FYANYNAFAKIAGVKLIPVTRRXEEGFAIPQN-LESFINERTKGIVLSNPCNPTGVVYGK 193
Query: 203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIV-----PVLTLGSISKRW 257
+ + E A++ G+ +I DEVY + F G F S + V+ + S+S ++
Sbjct: 194 DEXRYLVEIAERHGLFLIVDEVYSEIVF-------RGEFASALSIESDKVVVIDSVSXKF 246
Query: 258 IVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQGAV-PQILEKT------ 310
G R+G L+T + I S QG + P +LE+
Sbjct: 247 SACGARVGCLITRNEELI-----------------SHAXKLAQGRLAPPLLEQIGSVGLL 289
Query: 311 --EEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKL 355
++ FF + + RE + +L+E + KP G+ ++ +L
Sbjct: 290 NLDDSFFDFVRETYRERVETVLKKLEE-HGLKRFTKPSGAFYITAEL 335
>pdb|1W7N|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Pmp Form
Length = 422
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 143/338 (42%), Gaps = 22/338 (6%)
Query: 33 NSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVR-SARFNCYSSTVGILP 91
N +E + ++ LG G FP F AV+A H+V N Y+ T G P
Sbjct: 16 NPWVEFVKLASEHDVVNLGQG----FPDFPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPP 71
Query: 92 ARRAIADYLNRDLPYKLSP-DDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYE-- 148
+ +A + L ++ P +V +T+G A+ L G +++ P F YE
Sbjct: 72 LTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPM 131
Query: 149 -----ARATHSHLE---VRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVY 200
R L+ +++ +L + W++D + T ALV+ P NP G V+
Sbjct: 132 TMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVF 191
Query: 201 TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF-GSIVPVLTLGSISKRWIV 259
+ + L+ +A ++ ++ I DEVY + + + + G LT+GS K +
Sbjct: 192 SREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSA 251
Query: 260 PGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQG-AVPQILEKTEEEFFSKI 318
GW++GW++ P+ I++ V F + A + Q+L + +F +
Sbjct: 252 TGWKVGWVL--GPDHIMKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQF 309
Query: 319 TDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLN 356
++ D L+ + P P+GS F++ ++
Sbjct: 310 PQAMQRCRDHMIRSLQSVGL--KPLIPQGSYFLITDIS 345
>pdb|3OP7|A Chain A, Crystal Structure Of A Plp-Dependent Aminotransferase
(Zp_03625122.1) From Streptococcus Suis 89-1591 At 1.70
A Resolution
pdb|3P6K|A Chain A, Crystal Structure Of A Plp-Dependent Aminotransferase
(Zp_03625122.1) From Streptococcus Suis 89-1591 At 2.07
A Resolution
pdb|3P6K|B Chain B, Crystal Structure Of A Plp-Dependent Aminotransferase
(Zp_03625122.1) From Streptococcus Suis 89-1591 At 2.07
A Resolution
Length = 375
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 137/315 (43%), Gaps = 20/315 (6%)
Query: 108 LSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAK 167
+ P+ + T G T A ++L L PG +++ P + EV + +
Sbjct: 79 VKPEQILQTNGATGANLLVLYSLIEPGDHVISLYPTYQQLYDIPKSLGAEVDLWQIEEEN 138
Query: 168 GWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDH 227
GW DL+ + L T + I N NP G V +L+++ E A ++G +++DEVY
Sbjct: 139 GWLPDLEKLRQLIRPTTKXICINNANNPTGAVXDRTYLEELVEIASEVGAYILSDEVYRS 198
Query: 228 LAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKS 287
+ + P + + V+ + V S+S + +PG R+GW+ + + D ++
Sbjct: 199 FSELDVPSI-IEVYDKGIAV---NSLSXTYSLPGIRIGWVAA--------NHQVTDILRD 246
Query: 288 FLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEG 347
+ + + A V Q+ +E + IL E I ++E P ++ +
Sbjct: 247 YRDYTXICAGVFDDLVAQLALAHYQEILERNRHILEENLAILDQWIEEEPLVSYIRPAVV 306
Query: 348 SM-FVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALED 406
S FV + ++ +F L+L +E V+++PG ++R+ FA E L
Sbjct: 307 STSFVKIAVD-------XPXEDFCLQLLQEHGVLLVPGNRFERDGYVRLGFACEQETLIK 359
Query: 407 GLGRMKAFYDRHAKK 421
GL ++ F R K+
Sbjct: 360 GLEKLSQFLRRFDKE 374
>pdb|1W7L|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
pdb|1W7M|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With L-Phe
Length = 422
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 142/338 (42%), Gaps = 22/338 (6%)
Query: 33 NSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVR-SARFNCYSSTVGILP 91
N +E + ++ LG G FP F AV+A H+V N Y+ T G P
Sbjct: 16 NPWVEFVKLASEHDVVNLGQG----FPDFPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPP 71
Query: 92 ARRAIADYLNRDLPYKLSP-DDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYE-- 148
+ +A + L ++ P +V +T+G A+ L G +++ P F YE
Sbjct: 72 LTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPM 131
Query: 149 -----ARATHSHLE---VRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVY 200
R L+ +++ +L + W++D + T ALV+ P NP G V+
Sbjct: 132 TMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVF 191
Query: 201 TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF-GSIVPVLTLGSISKRWIV 259
+ + L+ +A ++ ++ I DEVY + + + + G LT+GS +
Sbjct: 192 SREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGXTFSA 251
Query: 260 PGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQG-AVPQILEKTEEEFFSKI 318
GW++GW++ P+ I++ V F + A + Q+L + +F +
Sbjct: 252 TGWKVGWVL--GPDHIMKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQF 309
Query: 319 TDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLN 356
++ D L+ + P P+GS F++ ++
Sbjct: 310 PQAMQRCRDHMIRSLQSVGL--KPLIPQGSYFLITDIS 345
>pdb|3FVS|A Chain A, Human Kynurenine Aminotransferase I In Complex With
Glycerol
pdb|3FVS|B Chain B, Human Kynurenine Aminotransferase I In Complex With
Glycerol
pdb|3FVU|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With Indole-3-acetic Acid
pdb|3FVU|B Chain B, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With Indole-3-acetic Acid
pdb|3FVX|A Chain A, Human Kynurenine Aminotransferase I In Complex With Tris
pdb|3FVX|B Chain B, Human Kynurenine Aminotransferase I In Complex With Tris
Length = 422
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 142/338 (42%), Gaps = 22/338 (6%)
Query: 33 NSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVR-SARFNCYSSTVGILP 91
N +E + ++ LG G FP F AV+A H+V N Y+ T G P
Sbjct: 16 NPWVEFVKLASEHDVVNLGQG----FPDFPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPP 71
Query: 92 ARRAIADYLNRDLPYKLSP-DDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYE-- 148
+ +A + L ++ P +V +T+G A+ L G +++ P F YE
Sbjct: 72 LTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPM 131
Query: 149 -----ARATHSHLE---VRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVY 200
R L+ +++ +L + W++D + T ALV+ P NP G V+
Sbjct: 132 TMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVF 191
Query: 201 TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF-GSIVPVLTLGSISKRWIV 259
+ + L+ +A ++ ++ I DEVY + + + + G LT+GS +
Sbjct: 192 SREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGXTFSA 251
Query: 260 PGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQG-AVPQILEKTEEEFFSKI 318
GW++GW++ P+ I++ V F + A + Q+L + +F +
Sbjct: 252 TGWKVGWVL--GPDHIMKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQF 309
Query: 319 TDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLN 356
++ D L+ + P P+GS F++ ++
Sbjct: 310 PQAMQRCRDHMIRSLQSVGL--KPIIPQGSYFLITDIS 345
>pdb|1WST|A Chain A, Crystal Structure Of Multiple Substrate Aminotransferase
(Msat) From Thermococcus Profundus
Length = 417
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 98/400 (24%), Positives = 169/400 (42%), Gaps = 45/400 (11%)
Query: 33 NSLLENLNKNDTRPLIPLGHG--DPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGIL 90
+ + E L +T +I L G P FP +AV+ + A Y +T G
Sbjct: 29 SEVRELLKLVETSDVISLAGGLPAPETFPVETIKKIAVEVLEEHADKAL--QYGTTKGFT 86
Query: 91 PARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRP-------G 143
P R A+A ++ + +S ++ G QA+++I V PG I++ P
Sbjct: 87 PLRLALARWMEKRYDIPMSKVEIMTVAGSQQALDLIGRVFLNPGDPIVVEAPTYLAAIQA 146
Query: 144 FPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENT-----VALVIINPGNPCGN 198
F YY+ L+ KG VDL + + + NP G
Sbjct: 147 FKYYDPEFISIPLD--------DKGMRVDLLEEKLEELRKQGKRVKIVYTVSTFQNPAGV 198
Query: 199 VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWI 258
+ +K+ E A + +++ D Y L + P P+ F V+ LG+ SK +
Sbjct: 199 TMSVDRRKKLLELANEYDFLIVEDGPYSELRYSGEPTPPIKHFDDYGRVIYLGTFSK-IL 257
Query: 259 VPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQGAVPQILEKTE-EEFFSK 317
PG+R+GW V + P+ I + ++ K +++ ++ TF Q + +E +E K
Sbjct: 258 APGFRIGW-VAAHPHLIRK----MEIAKQSIDLCTN--TFGQAIAWKYVENGYLDEHIPK 310
Query: 318 ITDILRETADICCDRLKE-IPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKE 376
I + + D + L+E +P KPEG MFV V +L EGI++ + +AK
Sbjct: 311 IIEFYKPRRDAMLEALEEYMPEGVEWTKPEGGMFVRV----TLPEGIDTKLMMERAVAK- 365
Query: 377 ESVIVLPG----ITVGLKDWLRITFAVEP-SALEDGLGRM 411
V +PG + K+ +R+ F P + +G+ R+
Sbjct: 366 -GVAYVPGEAFFVHRDKKNTMRLNFTYVPEETIREGVRRL 404
>pdb|3IHJ|A Chain A, Human Alanine Aminotransferase 2 In Complex With Plp
Length = 498
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/392 (23%), Positives = 170/392 (43%), Gaps = 36/392 (9%)
Query: 59 PSF-RTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNR-DLPYKLSPDDVYLT 116
PSF A I+ + YS++ G+ R +A Y+ R D PD++YLT
Sbjct: 100 PSFPEDAKKRARRILQACGGNSLGSYSASQGVNCIREDVAAYITRRDGGVPADPDNIYLT 159
Query: 117 LGCTQAIEVILTVLARPGAN----ILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVD 172
G + I IL +L G +++P P +P Y A + ++ L W ++
Sbjct: 160 TGASDGISTILKILVSGGGKSRTGVMIPIPQYPLYSAVISELDAIQVNYYLDEENCWALN 219
Query: 173 LD----AVEALADE-NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDH 227
++ AV+ D + L IINPGNP G V + + ++ + A + + ++ADEVY
Sbjct: 220 VNELRRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQD 279
Query: 228 LAFG--------NTPFVPMG-VFGSIVPVLTLGSISKRWIVP-GWRLGWLVTSDPNGILQ 277
+ MG + S V + + S SK ++ G+R G++ + + ++
Sbjct: 280 NVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINLHPEIK 339
Query: 278 DSGI-VDSIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDI---LRETADICCDRL 333
+ + S++ +S A I P E++ E+F + + L + A + D
Sbjct: 340 GQLVKLLSVRLCPPVSGQAAMDIVVNPPVAGEESFEQFSREKESVLGNLAKKAKLTEDLF 399
Query: 334 KEIPCITCPKKPEGSMFVMVKL-------NYSLLEGINSDMEFALKLAKEESVIVLPGIT 386
++P I C +G+M+ ++ + + DM + +KL +E + V+PG
Sbjct: 400 NQVPGIHC-NPLQGAMYAFPRIFIPAKAVEAAQAHQMAPDMFYCMKLLEETGICVVPGSG 458
Query: 387 VGLKD---WLRITFAVEPSALEDGLGRMKAFY 415
G ++ R+T L+ L ++K F+
Sbjct: 459 FGQREGTYHFRMTILPPVEKLKTVLQKVKDFH 490
>pdb|1YIY|A Chain A, Aedes Aegypti Kynurenine Aminotransferase
pdb|1YIY|B Chain B, Aedes Aegypti Kynurenine Aminotransferase
pdb|2R5C|B Chain B, Aedes Kynurenine Aminotransferase In Complex With Cysteine
pdb|2R5E|A Chain A, Aedes Kynurenine Aminotransferase In Complex With
Glutamine
pdb|2R5E|B Chain B, Aedes Kynurenine Aminotransferase In Complex With
Glutamine
Length = 429
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 114/258 (44%), Gaps = 28/258 (10%)
Query: 112 DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAK---- 167
+V +T+G +A+ + G +++ P F YE + R L P K
Sbjct: 103 EVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGT 162
Query: 168 ----GWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADE 223
W +D + +EAL +E T ++I P NP G V L+ +A KK ++ ++DE
Sbjct: 163 ISSADWVLDNNELEALFNEKTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDE 222
Query: 224 VYDHLAFGNTPFVPMGVF---GSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSG 280
VY+H+ F PF + + G +T+GS K + + GW++GW P +L++
Sbjct: 223 VYEHMVF--EPFEHIRICTLPGMWERTITIGSAGKTFSLTGWKIGW--AYGPEALLKNLQ 278
Query: 281 IVDSIKSFLNISSDPATFIQGAVPQILE------KTEEEFFSKITDILRETADICCDRLK 334
+V N AT IQ A+ E K+ E +F+ I+ L D L
Sbjct: 279 MVHQ-----NCVYTCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDYMASFLA 333
Query: 335 EIPCITCPKKPEGSMFVM 352
E+ P P+G F++
Sbjct: 334 EVG--MNPTVPQGGYFMV 349
>pdb|2O0R|A Chain A, The Three-Dimensional Structure Of
N-Succinyldiaminopimelate Aminotransferase From
Mycobacterium Tuberculosis
pdb|2O0R|B Chain B, The Three-Dimensional Structure Of
N-Succinyldiaminopimelate Aminotransferase From
Mycobacterium Tuberculosis
Length = 411
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 108/228 (47%), Gaps = 12/228 (5%)
Query: 112 DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLP-AKGWE 170
+V +T+G T+AI + L PG+ +LL P + Y + L+P +G+
Sbjct: 88 EVLVTVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYSPVVAMAGAHRVTVPLVPDGRGFA 147
Query: 171 VDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAF 230
+D DA+ T AL+I +P NP G V + L IAE A ++VI DEVY+HL F
Sbjct: 148 LDADALRRAVTPRTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVF 207
Query: 231 GNTPFVPMGVF-GSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL 289
+ +P+ F G +T+ S + + GW++GW G + V + K +L
Sbjct: 208 DHARHLPLAGFDGMAERTITISSAAXMFNCTGWKIGWAC-----GPAELIAGVRAAKQYL 262
Query: 290 N-ISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEI 336
+ + P Q AV L+ TE+ + + + + LR D L EI
Sbjct: 263 SYVGGAP---FQPAVALALD-TEDAWVAALRNSLRARRDRLAAGLTEI 306
>pdb|3B46|A Chain A, Crystal Structure Of Bna3p, A Putative Kynurenine
Aminotransferase From Saccharomyces Cerevisiae
pdb|3B46|B Chain B, Crystal Structure Of Bna3p, A Putative Kynurenine
Aminotransferase From Saccharomyces Cerevisiae
Length = 447
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 92/402 (22%), Positives = 155/402 (38%), Gaps = 43/402 (10%)
Query: 45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDL 104
R LI LG G F S+ A+ ++ N YS T G ++ +
Sbjct: 57 RELINLGQG----FFSYSPPQFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKLYSPIY 112
Query: 105 PYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLL 164
+L ++V +T G + I L L G +++ P F Y +V + +
Sbjct: 113 NTELKAENVTVTTGANEGILSCLMGLLNAGDEVIVFEPFFDQYIPNIELCGGKVVYVPIN 172
Query: 165 PAKG----------WEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKK 214
P K W +D + E T A++I P NP G V+T + L + K
Sbjct: 173 PPKELDQRNTRGEEWTIDFEQFEKAITSKTKAVIINTPHNPIGKVFTREELTTLGNICVK 232
Query: 215 LGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTL--GSISKRWIVPGWRLGWLVTSDP 272
+++I+DEVY+HL F ++ F + + LTL GS + GWR+GW+++
Sbjct: 233 HNVVIISDEVYEHLYFTDS-FTRIATLSPEIGQLTLTVGSAGXSFAATGWRIGWVLS--- 288
Query: 273 NGILQDSGIVDSIKSFLNIS-SDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCD 331
L + + K+ I + P+ + I + + +F K+ I
Sbjct: 289 ---LNAELLSYAAKAHTRICFASPSPLQEACANSINDALKIGYFEKMRQEYINKFKIFTS 345
Query: 332 RLKEIPCITCPKKPEGSMFVMVKL-------NYSLLEGI---NSDMEFALKLAKEESVIV 381
E+ PEG+ FV+V +Y E I D + L E V+
Sbjct: 346 IFDELGLPYT--APEGTYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLINELGVVA 403
Query: 382 LPGITVGLKD-------WLRITFAVEPSALEDGLGRMKAFYD 416
+P +K+ LR + + LE+ + R+K D
Sbjct: 404 IPPTEFYIKEHEKAAENLLRFAVCKDDAYLENAVERLKLLKD 445
>pdb|3TCM|A Chain A, Crystal Structure Of Alanine Aminotransferase From Hordeum
Vulgare
pdb|3TCM|B Chain B, Crystal Structure Of Alanine Aminotransferase From Hordeum
Vulgare
Length = 500
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 154/334 (46%), Gaps = 30/334 (8%)
Query: 83 YSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGAN-ILLPR 141
YS + GI R AIA + + + DD++LT G + + +++ +L R + IL+P
Sbjct: 130 YSHSQGIHGLRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLLIRNEKDGILVPI 189
Query: 142 PGFPYYEAR-ATHSHLEVRHFDLLPAKGWEVDLDAVEALADE------NTVALVIINPGN 194
P +P Y A A H V ++ L + GW ++ V+ ++ N ALV+INPGN
Sbjct: 190 PQYPLYSASIALHGGALVPYY-LNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGN 248
Query: 195 PCGNVYTYQHLQKIAETAKKLGIMVIADEVY-DHLAFGNTPF-------VPMGVFGSIVP 246
P G V ++ I + K G++++ADEVY +++ N F +G +P
Sbjct: 249 PTGQVLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLP 308
Query: 247 VLTLGSISKRWIVP-GWRLGWL-VTSDPNGILQDSGIVDSIKSFLNISSDPATFIQGAVP 304
+++ S+SK + G R G+ +T + + + S+ NI+ + P
Sbjct: 309 LVSYQSVSKGYYGECGKRGGYFEITGFSAPVREQIYKIASVNLCSNITGQILASLVMNPP 368
Query: 305 QILEKTEEEFFSKITDI---LRETADICCDRLKEIPCITCPKKPEGSMFVM--VKLNYSL 359
+ +++ + ++ I L A ++ ITC + EG+M+V + L
Sbjct: 369 KASDESYASYKAEKDGILASLARRAKALEHAFNKLEGITC-NEAEGAMYVFPQICLPQKA 427
Query: 360 LEGINS-----DMEFALKLAKEESVIVLPGITVG 388
+E + D +AL+L + ++V+PG G
Sbjct: 428 IEAAKAANKAPDAFYALRLLESTGIVVVPGSGFG 461
>pdb|1YIZ|A Chain A, Aedes Aegypti Kynurenine Aminotrasferase
pdb|1YIZ|B Chain B, Aedes Aegypti Kynurenine Aminotrasferase
pdb|2R5C|A Chain A, Aedes Kynurenine Aminotransferase In Complex With Cysteine
Length = 429
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 113/258 (43%), Gaps = 28/258 (10%)
Query: 112 DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAK---- 167
+V +T+G +A+ + G +++ P F YE + R L P K
Sbjct: 103 EVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGT 162
Query: 168 ----GWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADE 223
W +D + +EAL +E T ++I P NP G V L+ +A KK ++ ++DE
Sbjct: 163 ISSADWVLDNNELEALFNEKTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDE 222
Query: 224 VYDHLAFGNTPFVPMGVF---GSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSG 280
VY+H+ F PF + + G +T+GS + + GW++GW P +L++
Sbjct: 223 VYEHMVF--EPFEHIRICTLPGMWERTITIGSAGXTFSLTGWKIGW--AYGPEALLKNLQ 278
Query: 281 IVDSIKSFLNISSDPATFIQGAVPQILE------KTEEEFFSKITDILRETADICCDRLK 334
+V N AT IQ A+ E K+ E +F+ I+ L D L
Sbjct: 279 MVHQ-----NCVYTCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDYMASFLA 333
Query: 335 EIPCITCPKKPEGSMFVM 352
E+ P P+G F++
Sbjct: 334 EVG--MNPTVPQGGYFMV 349
>pdb|1B8G|A Chain A, 1-aminocyclopropane-1-carboxylate Synthase
pdb|1B8G|B Chain B, 1-aminocyclopropane-1-carboxylate Synthase
Length = 429
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 152/355 (42%), Gaps = 44/355 (12%)
Query: 90 LPA-RRAIADYLN--RDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPY 146
LPA ++A+ D++ R P+ + LT G T A E + LA PG +L+P P +P
Sbjct: 86 LPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPG 145
Query: 147 YEARAT-HSHLEVRHFDLLPAKGWEVDLDAVEALADE------NTVALVIINPGNPCGNV 199
++ + +E+ + G+++ A+E E +++ NP NP G
Sbjct: 146 FDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTT 205
Query: 200 YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVL----------- 248
T L + + GI +I+DE+Y AF + F+ S++ VL
Sbjct: 206 MTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFI------SVMEVLKDRNCDENSEV 259
Query: 249 -----TLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQGAV 303
+ S+SK +PG+R+G + ++D + + SF +SS + +
Sbjct: 260 WQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVV----AAATKMSSFGLVSSQTQHLLSAML 315
Query: 304 PQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEG- 362
+K + + ++ L++ L++ I+C G +F V + + L
Sbjct: 316 SD--KKLTKNYIAENHKRLKQRQKKLVSGLQK-SGISCLNGNAG-LFCWVDMRHLLRSNT 371
Query: 363 INSDMEFALKLAKEESVIVLPGITVGLKD--WLRITFAVEPS-ALEDGLGRMKAF 414
++ME K+ E + + PG + + W R+ FA P L+ + R+KAF
Sbjct: 372 FEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDLAMQRLKAF 426
>pdb|1M7Y|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With L-
Aminoethoxyvinylglycine
pdb|1M4N|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With
[2-(Amino-
Oxy)ethyl](5'-Deoxyadenosin-5'-Yl)(Methyl)sulfonium
Length = 435
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 152/355 (42%), Gaps = 44/355 (12%)
Query: 90 LPA-RRAIADYLN--RDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPY 146
LPA ++A+ D++ R P+ + LT G T A E + LA PG +L+P P +P
Sbjct: 88 LPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPG 147
Query: 147 YEARAT-HSHLEVRHFDLLPAKGWEVDLDAVEALADE------NTVALVIINPGNPCGNV 199
++ + +E+ + G+++ A+E E +++ NP NP G
Sbjct: 148 FDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTT 207
Query: 200 YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVL----------- 248
T L + + GI +I+DE+Y AF + F+ S++ VL
Sbjct: 208 MTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFI------SVMEVLKDRNCDENSEV 261
Query: 249 -----TLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQGAV 303
+ S+SK +PG+R+G + ++D + + SF +SS + +
Sbjct: 262 WQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVV----AAATKMSSFGLVSSQTQHLLSAML 317
Query: 304 PQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEG- 362
+K + + ++ L++ L++ I+C G +F V + + L
Sbjct: 318 SD--KKLTKNYIAENHKRLKQRQKKLVSGLQK-SGISCLNGNAG-LFCWVDMRHLLRSNT 373
Query: 363 INSDMEFALKLAKEESVIVLPGITVGLKD--WLRITFAVEPS-ALEDGLGRMKAF 414
++ME K+ E + + PG + + W R+ FA P L+ + R+KAF
Sbjct: 374 FEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDLAMQRLKAF 428
>pdb|1YNU|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With
L-Vinylglycine
Length = 473
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 152/355 (42%), Gaps = 44/355 (12%)
Query: 90 LPA-RRAIADYLN--RDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPY 146
LPA ++A+ D++ R P+ + LT G T A E + LA PG +L+P P +P
Sbjct: 88 LPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPG 147
Query: 147 YEARAT-HSHLEVRHFDLLPAKGWEVDLDAVEALADE------NTVALVIINPGNPCGNV 199
++ + +E+ + G+++ A+E E +++ NP NP G
Sbjct: 148 FDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTT 207
Query: 200 YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVL----------- 248
T L + + GI +I+DE+Y AF + F+ S++ VL
Sbjct: 208 MTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFI------SVMEVLKDRNCDENSEV 261
Query: 249 -----TLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQGAV 303
+ S+SK +PG+R+G + ++D + + SF +SS + +
Sbjct: 262 WQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVV----AAATKMSSFGLVSSQTQHLLSAML 317
Query: 304 PQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEG- 362
+K + + ++ L++ L++ I+C G +F V + + L
Sbjct: 318 SD--KKLTKNYIAENHKRLKQRQKKLVSGLQK-SGISCLNGNAG-LFCWVDMRHLLRSNT 373
Query: 363 INSDMEFALKLAKEESVIVLPGITVGLKD--WLRITFAVEPS-ALEDGLGRMKAF 414
++ME K+ E + + PG + + W R+ FA P L+ + R+KAF
Sbjct: 374 FEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDLAMQRLKAF 428
>pdb|3PIU|A Chain A, High-Resolution Structure Of Native Malus Domestica Acc
Synthase
Length = 410
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 152/343 (44%), Gaps = 26/343 (7%)
Query: 90 LPA-RRAIADYLN--RDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPY 146
LPA ++A+ D++ R P+ + LT G T A E + LA PG +L+P P +P
Sbjct: 71 LPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPG 130
Query: 147 YEARAT-HSHLEVRHFDLLPAKGWEVDLDAVEALADE------NTVALVIINPGNPCGNV 199
++ + +E+ + G+++ A+E E +++ NP NP G
Sbjct: 131 FDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTT 190
Query: 200 YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVP-MGVFGSIV--PVLTLGSISKR 256
T L + + GI +I+DE+Y AF + F+ M V V V + S+S +
Sbjct: 191 MTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDEVWQRVHVVYSLSXK 250
Query: 257 WI-VPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQGAVPQILEKTEEEFF 315
+ +PG+R+G + ++D + + SF +SS + + +K + +
Sbjct: 251 DLGLPGFRVGAIYSNDDMVV----AAATKMSSFGLVSSQTQHLLSAMLSD--KKLTKNYI 304
Query: 316 SKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEG-INSDMEFALKLA 374
++ L++ L++ I+C G +F V + + L ++ME K+
Sbjct: 305 AENHKRLKQRQKKLVSGLQK-SGISCLNGNAG-LFCWVDMRHLLRSNTFEAEMELWKKIV 362
Query: 375 KEESVIVLPGITVGLKD--WLRITFAVEPS-ALEDGLGRMKAF 414
E + + PG + + W R+ FA P L+ + R+KAF
Sbjct: 363 YEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDLAMQRLKAF 405
>pdb|2EGY|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Substrate Free Form), From Thermus
Thermophilus Hb27
pdb|2EGY|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Substrate Free Form), From Thermus
Thermophilus Hb27
pdb|2EGY|C Chain C, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Substrate Free Form), From Thermus
Thermophilus Hb27
pdb|2EGY|D Chain D, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Substrate Free Form), From Thermus
Thermophilus Hb27
pdb|2ZP7|C Chain C, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZP7|D Chain D, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZP7|F Chain F, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|3CBF|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase, From Thermus Thermophilus Hb27
pdb|3CBF|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase, From Thermus Thermophilus Hb27
pdb|2Z1Y|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Complexed With
N-(5'-Phosphopyridoxyl)-L-Leucine), From Thermus
Thermophilus Hb27
pdb|2Z1Y|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Complexed With
N-(5'-Phosphopyridoxyl)-L-Leucine), From Thermus
Thermophilus Hb27
pdb|2ZP7|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZP7|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZP7|E Chain E, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZYJ|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Complexed With
N-(5'-Phosphopyridoxyl)-L-Glutamate), From Thermus
Thermophilus Hb27
pdb|2ZYJ|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Complexed With
N-(5'-Phosphopyridoxyl)-L-Glutamate), From Thermus
Thermophilus Hb27
Length = 397
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 152/342 (44%), Gaps = 38/342 (11%)
Query: 83 YSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRP 142
YS T G P R +A+++ + P++V +T G QA++++ V G+ +LL P
Sbjct: 70 YSPTEGYAPLRAFVAEWIG------VRPEEVLITTGSQQALDLVGKVFLDEGSPVLLEAP 123
Query: 143 GFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPG--NPCGNVY 200
Y L+ F +PA DLDA+E + + + P NP G +
Sbjct: 124 S---YMGAIQAFRLQGPRFLTVPAGEEGPDLDALEEVLKRERPRFLYLIPSFQNPTGGLT 180
Query: 201 TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNT---PFVPMGVFGSIVPVLTLGSISKRW 257
+++ + + G++V+ D+ Y L FG + V+ LGS SK
Sbjct: 181 PLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYPGVIYLGSFSK-V 239
Query: 258 IVPGWRLGWLVTSDP--NGILQDSGIVDSIKSFLNISSDPATFIQGAVPQILEKTEEEFF 315
+ PG R+ + V ++Q D LN Q V ++L++ E
Sbjct: 240 LSPGLRVAFAVAHPEALQKLVQAKQGADLHTPMLN---------QMLVHELLKEGFSERL 290
Query: 316 SKITDILRETADICCDRL-KEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLA 374
++ + RE A L +E+P +P+G MFV ++L +G++++ F + A
Sbjct: 291 ERVRRVYREKAQAMLHALDREVPKEVRYTRPKGGMFVWMELP----KGLSAEGLF--RRA 344
Query: 375 KEESVIVLPG----ITVGLKDWLRITFA-VEPSALEDGLGRM 411
EE+V +PG G ++ LR+++A ++ + +G+ R+
Sbjct: 345 LEENVAFVPGGPFFANGGGENTLRLSYATLDREGIAEGVRRL 386
>pdb|2X5D|A Chain A, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|B Chain B, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|C Chain C, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|D Chain D, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
Length = 412
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 143/315 (45%), Gaps = 24/315 (7%)
Query: 81 NCYSSTVGILPARRAIADYLNRDLPYKLSPD-DVYLTLGCTQAIEVILTVLARPGANILL 139
+ YS++ GI RRAI+ + ++ P+ + +T+G + + ++ G IL+
Sbjct: 69 HGYSTSRGIPRLRRAISHWYRDRYDVQIDPESEAIVTIGSKEGLAHLMLATLDHGDTILV 128
Query: 140 PRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNV 199
P P +P + A + +VR L+P + +L+ + +++ P NP
Sbjct: 129 PNPSYPIHIYGAVIAGAQVRSVPLVPGIDFFNELERAIRESIPKPRMMILGFPSNPTAQC 188
Query: 200 YTYQHLQKIAETAKKLGIMVIADEVYDHLAFG--NTPFVPMGVFGSIVPVLTLGSISKRW 257
+++ AK+ +MV+ D Y + + P + M V G+ + ++SK +
Sbjct: 189 VELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSI-MQVPGAKDIAVEFFTLSKSY 247
Query: 258 IVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATF--IQGAVPQILEKTEEEFF 315
+ GWR+G++V +P + + IKS+ D TF +Q A LE +++
Sbjct: 248 NMAGWRIGFMV-GNPELV----SALARIKSY----HDYGTFTPLQVAAIAALE-GDQQCV 297
Query: 316 SKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKL--NYSLLEGINSDMEFALKL 373
I ++ D+ L+E + + P+ SM+V K+ Y+ L +EFA KL
Sbjct: 298 RDIARQYQQRRDVLVKGLREAGWMV--ENPKASMYVWAKIPEPYAHL----GSLEFAKKL 351
Query: 374 AKEESVIVLPGITVG 388
++ V V PGI G
Sbjct: 352 LQDAKVSVSPGIGFG 366
>pdb|3AOV|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Plp
pdb|3AOV|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Plp
pdb|3AOW|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Akg
pdb|3AOW|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Akg
pdb|3ATH|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Four Akgs As Substrates
And Allosteric Effectors
pdb|3ATH|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Four Akgs As Substrates
And Allosteric Effectors
pdb|3AV7|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Pmp, Kyn As Substrates
And Kya As Products
pdb|3AV7|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Pmp, Kyn As Substrates
And Kya As Products
Length = 448
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 103/429 (24%), Positives = 182/429 (42%), Gaps = 50/429 (11%)
Query: 10 NQWGFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPL-----------GHGDPSAF 58
+Q G E +K+ G R LE + ++ R L+ L G +P F
Sbjct: 33 SQEGIGMEENIKSMLGDVERFFSKKALE-MRASEVRELLKLVETSDIISLAGGLPNPKTF 91
Query: 59 PSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPD-DVYLTL 117
P + V+ + A Y +T G P R + +L + Y +S D D+ +T
Sbjct: 92 PKEIIRDILVEIMEKYADKAL--QYGTTKGFTPLRETLMKWLGKR--YGISQDNDIMITS 147
Query: 118 GCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDL-LPAKGWEVD---- 172
G QA+++I V PG +++ P Y A + E ++ + L +G +V+
Sbjct: 148 GSQQALDLIGRVFLNPGDIVVVEAP--TYLAALQAFNFYEPQYIQIPLDDEGMKVEILEE 205
Query: 173 -LDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFG 231
L +++ + V + NP G + + E A + +V+ D+ Y L +
Sbjct: 206 KLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYS 265
Query: 232 NTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI 291
P + + V+ LG+ SK + PG+R+GW+V DP GI++ I
Sbjct: 266 GNPEKKIKALDNEGRVIYLGTFSK-ILAPGFRIGWMV-GDP-GIIRKMEIAKQ------- 315
Query: 292 SSDPATFIQGAV---PQILEKTEEEFFSKITDILRETADICCDRLKE-IPCITCPKKPEG 347
S+D T + G V + E+ +I + D + L+E +P KPEG
Sbjct: 316 STDLCTNVFGQVVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLEALEEFMPEGVKWTKPEG 375
Query: 348 SMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITV----GLKDWLRITFA-VEPS 402
MF+ V +L +GI+S L+ A ++ V +PG +K+ +R+ F V+
Sbjct: 376 GMFIWV----TLPDGIDSKK--MLERAIKKGVAYVPGEAFYAHRDVKNTMRLNFTYVDED 429
Query: 403 ALEDGLGRM 411
+ +G+ R+
Sbjct: 430 KIMEGIKRL 438
>pdb|1X0M|A Chain A, A Human Kynurenine Aminotransferase Ii Homologue From
Pyrococcus Horikoshii Ot3
Length = 403
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 97/397 (24%), Positives = 173/397 (43%), Gaps = 40/397 (10%)
Query: 33 NSLLENLNKNDTRPLIPLGHG--DPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGIL 90
+ + E L +T +I L G +P FP + V+ + A Y +T G
Sbjct: 19 SEVRELLKLVETSDIISLAGGLPNPKTFPKEIIRDILVEIMEKYADKAL--QYGTTKGFT 76
Query: 91 PARRAIADYLNRDLPYKLSPD-DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEA 149
P R + +L + Y +S D D+ +T G QA+++I V PG +++ P Y A
Sbjct: 77 PLRETLMKWLGKR--YGISQDNDIMITSGSQQALDLIGRVFLNPGDIVVVEAP--TYLAA 132
Query: 150 RATHSHLEVRHFDL-LPAKGWEVD-----LDAVEALADENTVALVIINPGNPCGNVYTYQ 203
+ E ++ + L +G +V+ L +++ + V + NP G
Sbjct: 133 LQAFNFYEPQYIQIPLDDEGMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNED 192
Query: 204 HLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWR 263
+ + E A + +V+ D+ Y L + P + + V+ LG+ SK + PG+R
Sbjct: 193 RRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSK-ILAPGFR 251
Query: 264 LGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQGAV---PQILEKTEEEFFSKITD 320
+GW+V DP GI++ I S+D T + G V + E+ +I
Sbjct: 252 IGWMV-GDP-GIIRKMEIAKQ-------STDLCTNVFGQVVAWRYVDGGYLEKHIPEIRK 302
Query: 321 ILRETADICCDRLKE-IPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESV 379
+ D + L+E +P KPEG MF+ V +L +GI+S L+ A ++ V
Sbjct: 303 FYKPRRDAMLEALEEFMPEGVKWTKPEGGMFIWV----TLPDGIDSKK--MLERAIKKGV 356
Query: 380 IVLPGITV----GLKDWLRITFA-VEPSALEDGLGRM 411
+PG +K+ +R+ F V+ + +G+ R+
Sbjct: 357 AYVPGEAFYAHRDVKNTMRLNFTYVDEDKIMEGIKRL 393
>pdb|2ZC0|A Chain A, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
pdb|2ZC0|B Chain B, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
pdb|2ZC0|C Chain C, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
pdb|2ZC0|D Chain D, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
Length = 407
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 150/354 (42%), Gaps = 40/354 (11%)
Query: 47 LIPLGHGDP--SAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDL 104
LI L GDP P +A + + +S Y+ GI R +A +L +
Sbjct: 36 LISLAAGDPDPELIPRAVLGEIAKEVLEKEPKSV---MYTPANGIPELREELAAFLKKYD 92
Query: 105 PYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLL 164
++SP+++ +T+G T A++++ VL PG ++ P Y L + + +
Sbjct: 93 HLEVSPENIVITIGGTGALDLLGRVLIDPGDVVITENPS--YINTLLAFEQLGAK-IEGV 149
Query: 165 PA--KGWEVDL---DAVEALADENTVALVIINP--GNPCGNVYTYQHLQKIAETAKKLGI 217
P G VDL E A V L+ P NP G + + + + E A K +
Sbjct: 150 PVDNDGMRVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVTMSMERRKALLEIASKYDL 209
Query: 218 MVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQ 277
++I D Y+ + + VP+ + V+ G++SK + G+R+GW++
Sbjct: 210 LIIEDTAYNFMRYEGGDIVPLKALDNEGRVIVAGTLSK-VLGTGFRIGWIIAEG------ 262
Query: 278 DSGIVDSIKSFLNISSDPATFIQGAVPQI--LEKTEEEFFSK--ITDIL---RETADICC 330
+ +K L + P F A+ Q LE + +F K + L +E DI
Sbjct: 263 -----EILKKVL-MQKQPIDFCAPAISQYIALEYLKRGYFEKYHLEGALLGYKEKRDIML 316
Query: 331 DRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPG 384
L+ KP MFVM + L EG + + FA +L + E V+V+PG
Sbjct: 317 KALENHLPNAEFTKPIAGMFVM----FFLPEGADG-ISFANELMEREGVVVVPG 365
>pdb|3E2Z|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Kynurenine
pdb|3E2Y|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Glutamine
pdb|3E2Y|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Glutamine
Length = 410
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 101/236 (42%), Gaps = 21/236 (8%)
Query: 47 LIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPY 106
++ LG G FP S + + + N Y+ G +A++ +
Sbjct: 25 VVNLGQG----FPDISPPSYVKEELSKAAFIDNMNQYTRGFGHPALVKALSCLYGKIYQR 80
Query: 107 KLSP-DDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYE-----ARATHSHLEVRH 160
++ P +++ + +G ++ + L PG +++ P + YE A A + +R
Sbjct: 81 QIDPNEEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRS 140
Query: 161 FDLLPAKG-------WEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAK 213
P G W D +E+ T A+++ P NP G VYT Q LQ IA+
Sbjct: 141 ---KPTDGMKWTSSDWTFDPRELESKFSSKTKAIILNTPHNPLGKVYTRQELQVIADLCV 197
Query: 214 KLGIMVIADEVYDHLAFGNTPFVPMGVF-GSIVPVLTLGSISKRWIVPGWRLGWLV 268
K + I+DEVY+ L + V + G +T+GS K + V GW+LGW +
Sbjct: 198 KHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGKTFSVTGWKLGWSI 253
>pdb|1IAX|A Chain A, Crystal Structure Of Acc Synthase Complexed With Plp
pdb|1IAX|B Chain B, Crystal Structure Of Acc Synthase Complexed With Plp
pdb|1IAY|A Chain A, Crystal Structure Of Acc Synthase Complexed With Cofactor
Plp And Inhibitor Avg
Length = 428
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 81/355 (22%), Positives = 151/355 (42%), Gaps = 43/355 (12%)
Query: 88 GILPARRAIADYL--NRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFP 145
G+ R+AIA ++ R + P+ V + G T A E I+ LA PG L+P P +P
Sbjct: 84 GLPEFRKAIAKFMEKTRGGRVRFDPERVVMAGGATGANETIIFCLADPGDAFLVPSPYYP 143
Query: 146 YYEARAT-HSHLEVRHFDLLPAKGWEVDLDAVEALADENTV-------ALVIINPGNPCG 197
+ + +++ + +++ AV+ A EN L++ NP NP G
Sbjct: 144 AFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKE-AYENAQKSNIKVKGLILTNPSNPLG 202
Query: 198 NVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMG--------VFGSIVPVLT 249
L+ + + I ++ DE+Y F FV + + + V
Sbjct: 203 TTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHI 262
Query: 250 LGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQGAVPQILEK 309
+ S+SK +PG+R+G + + + + + + SF +S+ F+ +
Sbjct: 263 VYSLSKDMGLPGFRVGIIYSFNDDVV----NCARKMSSFGLVSTQTQYFLAAML------ 312
Query: 310 TEEEFFSKITDILRETADICCDRLK------EIPCITCPKKPEGSMFVMVKLNYSLLEG- 362
++E+F + + LRE+A R K E+ I C K G +F + L L E
Sbjct: 313 SDEKF---VDNFLRESAMRLGKRHKHFTNGLEVVGIKCLKNNAG-LFCWMDLRPLLREST 368
Query: 363 INSDMEFALKLAKEESVIVLPGITVGLKD--WLRITFA-VEPSALEDGLGRMKAF 414
+S+M + + + V PG + ++ W R+ FA ++ ++ L R++ F
Sbjct: 369 FDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFANMDDGTVDIALARIRRF 423
>pdb|3E2F|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase
Iii, Plp-Bound Form
pdb|3E2F|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase
Iii, Plp-Bound Form
pdb|3E2Z|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Kynurenine
pdb|2ZJG|A Chain A, Crystal Structural Of Mouse Kynurenine Aminotransferase
Iii
pdb|2ZJG|B Chain B, Crystal Structural Of Mouse Kynurenine Aminotransferase
Iii
Length = 410
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 100/236 (42%), Gaps = 21/236 (8%)
Query: 47 LIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPY 106
++ LG G FP S + + + N Y+ G +A++ +
Sbjct: 25 VVNLGQG----FPDISPPSYVKEELSKAAFIDNMNQYTRGFGHPALVKALSCLYGKIYQR 80
Query: 107 KLSP-DDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYE-----ARATHSHLEVRH 160
++ P +++ + +G ++ + L PG +++ P + YE A A + +R
Sbjct: 81 QIDPNEEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRS 140
Query: 161 FDLLPAKG-------WEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAK 213
P G W D +E+ T A+++ P NP G VYT Q LQ IA+
Sbjct: 141 ---KPTDGMKWTSSDWTFDPRELESKFSSKTKAIILNTPHNPLGKVYTRQELQVIADLCV 197
Query: 214 KLGIMVIADEVYDHLAFGNTPFVPMGVF-GSIVPVLTLGSISKRWIVPGWRLGWLV 268
K + I+DEVY+ L + V + G +T+GS + V GW+LGW +
Sbjct: 198 KHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGXTFSVTGWKLGWSI 253
>pdb|1LKC|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Salmonella Enterica
pdb|1LC5|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From S. Enterica In Its Apo State
pdb|1LC7|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From S. Enterica Complexed With A
Substrate
pdb|1LC8|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From S. Enterica Complexed With Its
Reaction Intermediate
Length = 364
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 142 PGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYT 201
PGF Y S E+R + L A GW++ +EAL + L + P NP G +
Sbjct: 106 PGFAEYGRALAQSGCEIRRWSLREADGWQLTDAILEALT-PDLDCLFLCTPNNPTGLLPE 164
Query: 202 YQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPG 261
LQ IA+ K L I +I DE + T F+P + L S++K + +PG
Sbjct: 165 RPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIP--ALKDNPHIWVLRSLTKFYAIPG 222
Query: 262 WRLGWLVTSD 271
RLG+LV SD
Sbjct: 223 LRLGYLVNSD 232
>pdb|3JTX|A Chain A, Crystal Structure Of Aminotransferase (np_283882.1) From
Neisseria Meningitidis Z2491 At 1.91 A Resolution
pdb|3JTX|B Chain B, Crystal Structure Of Aminotransferase (np_283882.1) From
Neisseria Meningitidis Z2491 At 1.91 A Resolution
Length = 396
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/362 (22%), Positives = 151/362 (41%), Gaps = 63/362 (17%)
Query: 48 IPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNR--DLP 105
+PL G+P P+ + + A+ A +H + Y T G+ R+A A++L R D
Sbjct: 33 VPLHIGEPK-HPTPKVITDALTASLHELEK-----YPLTAGLPELRQACANWLKRRYDGL 86
Query: 106 YKLSPDDVYLTLGCTQAIEVILTVLARPGAN-----ILLPRPGFPYYEARATHSHLEVRH 160
+ +++ LG +A+ + + P ++ I+ P P + YE E+ H
Sbjct: 87 TVDADNEILPVLGSREALFSFVQTVLNPVSDGIKPAIVSPNPFYQIYEGATLLGGGEI-H 145
Query: 161 FDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVI 220
F PA + D ++ + T + + +P NP G+V +++ + K G ++
Sbjct: 146 FANCPAPSFNPDWRSISEEVWKRTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIA 205
Query: 221 ADEVYDHLAF-GNTPFVPMGVFGSI----VPVLTLGSISKRWIVPGWRLGWLVTSDPNGI 275
+DE Y + F GN P + + +L S+S R VPG R G++
Sbjct: 206 SDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLXFTSLSXRSNVPGLRSGFV-------- 257
Query: 276 LQDSGIVDSIKSFL----------NISSDPATFIQGAVPQIL---EKTEEEFFSKITDIL 322
+G + +K+FL +I A+ Q + + +E F ++ IL
Sbjct: 258 ---AGDAELLKNFLLYRTYHGSAXSIPVQRASIAAWDDEQHVIDNRRLYQEKFERVIPIL 314
Query: 323 RETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVL 382
++ D+ K P+ S ++ +K+ D+ FA L ++ ++ VL
Sbjct: 315 QQVFDV--------------KLPDASFYIWLKVP------DGDDLAFARNLWQKAAIQVL 354
Query: 383 PG 384
PG
Sbjct: 355 PG 356
>pdb|3L8A|A Chain A, Crystal Structure Of Metc From Streptococcus Mutans
pdb|3L8A|B Chain B, Crystal Structure Of Metc From Streptococcus Mutans
Length = 421
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 73/143 (51%), Gaps = 3/143 (2%)
Query: 94 RAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRP-GFPYYEARAT 152
+A+ D+ ++ Y + +D+ G AI + L + G +L+ P +P+
Sbjct: 103 QAVIDWERKEHDYAVVKEDILFIDGVVPAISIALQAFSEKGDAVLINSPVYYPFARTIRL 162
Query: 153 HSHLEVRHFDLLPAKGWEVDLDAVEA-LADENTVALVIINPGNPCGNVYTYQHLQKIAET 211
+ H V + + +E+D + +E + D N ++ +P NP G V+ L KIAE
Sbjct: 163 NDHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLCSPHNPGGRVWDNDDLIKIAEL 222
Query: 212 AKKLGIMVIADEVYDHLA-FGNT 233
KK G+++++DE++ LA FGNT
Sbjct: 223 CKKHGVILVSDEIHQDLALFGNT 245
>pdb|3H14|A Chain A, Crystal Structure Of A Putative Aminotransferase From
Silicibacter Pomeroyi
Length = 391
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 142/353 (40%), Gaps = 28/353 (7%)
Query: 67 AVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVI 126
AV+A+ S+ + Y+ +G+ R+ IA L P V +T G + +
Sbjct: 49 AVEALAKSLETDALG-YTVALGLPALRQRIARLYGEWYGVDLDPGRVVITPGSSGGFLLA 107
Query: 127 LTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEA-LADENTV 185
T L G + + PG+P Y R L + DL A E L V A A +
Sbjct: 108 FTALFDSGDRVGIGAPGYPSY--RQILRALGLVPVDLPTAP--ENRLQPVPADFAGLDLA 163
Query: 186 ALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIV 245
L + +P NP G + + E A+ G I+DE+Y + + + +
Sbjct: 164 GLXVASPANPTGTXLDHAAXGALIEAAQAQGASFISDEIYHGIEYEAKAVTALELTDE-- 221
Query: 246 PVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQGAVPQ 305
+ S SK + GWR+GW V + +V+ I I + A+ V
Sbjct: 222 -CYVINSFSKYFSXTGWRVGWXVVPE-----DQVRVVERIAQNXFICAPHAS----QVAA 271
Query: 306 ILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINS 365
+ + D+ + + +RL + T P+G+ +V Y+ + +
Sbjct: 272 LAALDCDAELQANLDVYKANRKLXLERLPKA-GFTRIAPPDGAFYV-----YADVSDLTD 325
Query: 366 DME-FALKLAKEESVIVLPGITVGLK---DWLRITFAVEPSALEDGLGRMKAF 414
D FA ++ ++ V V PG+ + LR ++A + +E+GL R++AF
Sbjct: 326 DSRAFAAEILEKAGVAVTPGLDFDPERGAGTLRFSYARATADIEEGLDRLEAF 378
>pdb|4DGT|A Chain A, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630 Crystallized With
Magnesium Formate
pdb|4DGT|B Chain B, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630 Crystallized With
Magnesium Formate
pdb|4DQ6|A Chain A, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630
pdb|4DQ6|B Chain B, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630
Length = 391
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/376 (20%), Positives = 156/376 (41%), Gaps = 26/376 (6%)
Query: 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRD 103
T L+P+ D F+ A +D++ + + Y T +I ++L R
Sbjct: 31 TNDLLPMWVADMD----FKAAPCIIDSLKNRLEQE---IYGYTTRPDSYNESIVNWLYRR 83
Query: 104 LPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLE--VRHF 161
+K+ + + + G AI +++ L + I++ P + + + +++ E +
Sbjct: 84 HNWKIKSEWLIYSPGVIPAISLLINELTKANDKIMIQEPVYSPFNSVVKNNNRELIISPL 143
Query: 162 DLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIA 221
L + +D + +E ++ ++ NP NP G V+T L+K+ + K + +I+
Sbjct: 144 QKLENGNYIMDYEDIENKI-KDVKLFILCNPHNPVGRVWTKDELKKLGDICLKHNVKIIS 202
Query: 222 DEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSI--SKRWIVPGWRLGWLVTSDPNGILQDS 279
DE++ + +PM T+ + +K + + G + ++V D +D
Sbjct: 203 DEIHSDIILKKHKHIPMASISKEFEKNTITCMAPTKTFNIAGLQSSYVVLPDE----KDY 258
Query: 280 GIVDSIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKE-IPC 338
++D +F I + E + + L D + E +P
Sbjct: 259 KLLDD--AFTRIDIKRNNCFSLVATEASYNNGESWLESFLEYLESNIDFAIKYINENMPK 316
Query: 339 ITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL--KDWLRIT 396
+ +KPEG+ + V ++S L G+ SD E L ++ V + G + G+ + RI
Sbjct: 317 LKV-RKPEGTYLLWV--DFSAL-GL-SDEELESILVQKGKVALNQGNSFGIGGSGYQRIN 371
Query: 397 FAVEPSALEDGLGRMK 412
A S LE+ L R+K
Sbjct: 372 LACPRSMLEEALIRIK 387
>pdb|2DOU|A Chain A, Probable N-Succinyldiaminopimelate Aminotransferase
(Ttha0342) From Thermus Thermophilus Hb8
pdb|2DOU|B Chain B, Probable N-Succinyldiaminopimelate Aminotransferase
(Ttha0342) From Thermus Thermophilus Hb8
Length = 376
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 128/300 (42%), Gaps = 38/300 (12%)
Query: 77 SARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGAN 136
+AR+ VG+ P R A+A +G + + +L L P
Sbjct: 72 AARWYEGRYGVGLDPRREALA------------------LIGSQEGLAHLLLALTEPEDL 113
Query: 137 ILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPC 196
+LLP +P Y A + L R F + + DL AV L++ P NP
Sbjct: 114 LLLPEVAYPSYFGAARVASL--RTFLIPLREDGLADLKAVPEGVWREAKVLLLNYPNNPT 171
Query: 197 GNVYTYQHLQKIAETAKKLGIMVIADEVY-DHLAFGNTPFVPMGVFGSIVPVLTLGSISK 255
G V + + ++ A+K G+ +I D Y D + G P P+ + G+ V+ L S+SK
Sbjct: 172 GAVADWGYFEEALGLARKHGLWLIHDNPYVDQVYEGEAP-SPLALPGAKERVVELFSLSK 230
Query: 256 RWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQGAVPQILEKTEEEFF 315
+ + G+RLG+ + S+ + ++ +K ++ + G KT +E
Sbjct: 231 SYNLAGFRLGFALGSE-----EALARLERVKGVIDFNQYAGVLRMGVEAL---KTPKEVV 282
Query: 316 SKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAK 375
+ RE A + LK + + P+ +M++ +L EG++ D+EF L+L +
Sbjct: 283 RGYARVYRERALGMAEALKGVLSLLPPR---ATMYLWGRLP----EGVD-DLEFGLRLVE 334
>pdb|4GE7|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE7|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
Length = 439
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 124/300 (41%), Gaps = 52/300 (17%)
Query: 112 DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHS------HLEVRHFDLLP 165
D+ +T G Q + + ++ PG N+LL P + ++ H ++ ++P
Sbjct: 110 DLCVTSGSQQGLXKVFEMIINPGDNVLLDEPAY-SGTLQSLHPLGCNIINVASDESGIVP 168
Query: 166 ------AKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMV 219
W+ + DA + + N NP GN T + ++I E A+K ++
Sbjct: 169 DSLRDILSRWKPE-DAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLI 227
Query: 220 IADEVYDHLAF--GNTP-FVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGIL 276
I D+ Y L F G P F+ M V G ++ + I I G R+G+L P
Sbjct: 228 IEDDPYYFLQFNSGRVPTFLSMDVDGRVIRADSFSKI----ISSGLRIGFLTGPKP---- 279
Query: 277 QDSGIVDSIKSFLNISS-DPATFIQGAVPQILEKTEEE-----------FFSKITDILRE 324
+++ + + +S+ P+TF Q + Q+L + EE F+S D +
Sbjct: 280 ----LIERVILHIQVSTLHPSTFNQLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILA 335
Query: 325 TADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPG 384
AD L E P MF+ +K ++GIN E + A + V++LPG
Sbjct: 336 AADKWLTGLAEWHV------PAAGMFLWIK-----VKGINDVKELIEEKAVKMGVLMLPG 384
>pdb|3T32|A Chain A, Crystal Structure Of A Putative C-S Lyase From Bacillus
Anthracis
pdb|3T32|B Chain B, Crystal Structure Of A Putative C-S Lyase From Bacillus
Anthracis
Length = 383
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/329 (18%), Positives = 142/329 (43%), Gaps = 29/329 (8%)
Query: 96 IADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFP-YYEARATHS 154
I ++ + + + + + + G A+ + + ++L+ P +P ++E T++
Sbjct: 68 ICNWTKKQYNWDIQKEWIVFSAGIVPALSTSIQAFTKENESVLVQPPIYPPFFEXVTTNN 127
Query: 155 HLEVRHFDLLPAKG----WEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAE 210
R + P + + +D + +E + ++ +P NP G V+ + L K+
Sbjct: 128 ----RQLCVSPLQKQNDTYAIDFEHLEKQFQQGVKLXLLCSPHNPIGRVWKKEELTKLGS 183
Query: 211 TAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP--VLTLGSISKRWIVPGWRLGWLV 268
K ++V+ADE++ + + + P + +T + S + + G + ++
Sbjct: 184 LCTKYNVIVVADEIHSDIIYADHTHTPFASLSEELAARTITCXAPSXTFNIAGLQASIII 243
Query: 269 TSDPNGILQDSGI-VDSIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETAD 327
PN L+ + + + F ++ T Q A + ++ ++I + + A
Sbjct: 244 I--PNEKLRQAFTSIQYRQGFHGLNIFAYTAXQSAYTEC-----NDWLNEIRFYIEDNAK 296
Query: 328 ICCDRLKE-IPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEE-SVIVLPGI 385
C+ +K+ IP ++ KPEGS + + + +N + KL +E+ +IV PG
Sbjct: 297 FACEYIKDHIPTLSV-XKPEGSFLLWIDCS-----ALNLSQDERTKLLEEKGKIIVEPGE 350
Query: 386 TVGL--KDWLRITFAVEPSALEDGLGRMK 412
GL ++ + I S LE+ L R++
Sbjct: 351 KYGLGGEEHIGINIGCPRSVLEEILNRLR 379
>pdb|4GDY|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GDY|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE4|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE4|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|C Chain C, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|D Chain D, Kynurenine Aminotransferase Ii Inhibitors
Length = 439
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 120/303 (39%), Gaps = 58/303 (19%)
Query: 112 DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEV 171
D+ +T G Q + + ++ PG N+LL P + T L +++ E
Sbjct: 110 DLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAY-----SGTLQSLHPLGCNIINVASDES 164
Query: 172 DL---------------DAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLG 216
+ DA + + N NP GN T + ++I E A+K
Sbjct: 165 GIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYD 224
Query: 217 IMVIADEVYDHLAF--GNTP-FVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPN 273
++I D+ Y L F G P F+ M V G ++ + I I G R+G+L P
Sbjct: 225 FLIIEDDPYYFLQFNSGRVPTFLSMDVDGRVIRADSFSKI----ISSGLRIGFLTGPKP- 279
Query: 274 GILQDSGIVDSIKSFLNISS-DPATFIQGAVPQILEKTEEE-----------FFSKITDI 321
+++ + + +S+ P+TF Q + Q+L + EE F+S D
Sbjct: 280 -------LIERVILHIQVSTLHPSTFNQLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDA 332
Query: 322 LRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIV 381
+ AD L E P MF+ +K ++GIN E + A + V++
Sbjct: 333 ILAAADKWLTGLAEWHV------PAAGMFLWIK-----VKGINDVKELIEEKAVKMGVLM 381
Query: 382 LPG 384
LPG
Sbjct: 382 LPG 384
>pdb|3EZS|A Chain A, Crystal Structure Of Aminotransferase Aspb (Np_207418.1)
From Helicobacter Pylori 26695 At 2.19 A Resolution
pdb|3EZS|B Chain B, Crystal Structure Of Aminotransferase Aspb (Np_207418.1)
From Helicobacter Pylori 26695 At 2.19 A Resolution
Length = 376
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 95/389 (24%), Positives = 148/389 (38%), Gaps = 59/389 (15%)
Query: 50 LGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLS 109
LG G+P F T DA+ + S N Y + R A + R +L
Sbjct: 28 LGIGEPQ----FETPKFIQDALKNHTHS--LNIYPKSAFEESLRAAQRGFFKRRFKIELK 81
Query: 110 PDDVYLTLGCTQAI----EVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLP 165
+++ TLG + + +L P I P P + YE A ++ LL
Sbjct: 82 ENELISTLGSREVLFNFPSFVLFDYQNP--TIAYPNPFYQIYEGAAKF----IKAKSLLX 135
Query: 166 AKGWEVDLDAVEALADENTVALVIIN-PGNPCGNVYTYQHLQKIAETAKKLGIMVIADEV 224
E D + V LVI+N P NP G + + L + A K ++I DE
Sbjct: 136 PLTKENDFTPSLNEKELQEVDLVILNSPNNPTGRTLSLEELISWVKLALKHDFILINDEC 195
Query: 225 YDHLAFGNTPFVPMGVF--------GSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGIL 276
Y + + NTP P + + VL + S+SKR PG R G+ I
Sbjct: 196 YSEI-YENTP--PPSLLEACXLAGNEAFKNVLVIHSLSKRSSAPGLRSGF--------IA 244
Query: 277 QDSGIVDSIKSF-LNISSDPATFIQGAVPQI-LEKTEEEFFSKITDILRETADICCDRLK 334
DS +++ K+F + A IQ A L+ EFF +I + LK
Sbjct: 245 GDSRLLEKYKAFRAYLGYTSANAIQKASEAAWLDDRHAEFFR----------NIYANNLK 294
Query: 335 EIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLK---- 390
+K + + Y L N + FA L + E +I LP + +G
Sbjct: 295 ------LARKIFKNTLIYPYSFYVYLPVQNGE-NFAKTLYQNEGIITLPALYLGRNRIGA 347
Query: 391 DWLRITFAVEPSALEDGLGRMKAFYDRHA 419
D++R+ + LE L ++ + + HA
Sbjct: 348 DYVRLALVYDTPLLEKPLEIIETYRENHA 376
>pdb|3B1C|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1D|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1E|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
Length = 392
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 85/186 (45%), Gaps = 10/186 (5%)
Query: 94 RAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATH 153
+A+ D+ + Y +D+ G AI + + + G +L+ P +P +
Sbjct: 73 QAVLDWEKSEHQYSFDKEDIVFVEGVVPAISIAIQAFTKEGEAVLINSPVYPPFARSVRL 132
Query: 154 SHLEVRHFDLLPAKG-WEVDLDAVEALADENTVALVII-NPGNPCGNVYTYQHLQKIAET 211
++ ++ L G +++D + +E EN V L ++ NP NP G V+ + L++I
Sbjct: 133 NNRKLVSNSLKEENGLFQIDFEQLENDIVENDVKLYLLCNPHNPGGRVWEREVLEQIGHL 192
Query: 212 AKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP-----VLTLGSISKRWIVPGWRLGW 266
+K +++++DE++ L V F ++ P L L S +K + + G + +
Sbjct: 193 CQKHHVILVSDEIHQDLTLFGHEHVS---FNTVSPDFKDFALVLSSATKTFNIAGTKNSY 249
Query: 267 LVTSDP 272
+ +P
Sbjct: 250 AIIENP 255
>pdb|3UE8|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|3UE8|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
Length = 439
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 122/300 (40%), Gaps = 52/300 (17%)
Query: 112 DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHS------HLEVRHFDLLP 165
D+ +T G Q + + ++ PG N+LL P + ++ H ++ ++P
Sbjct: 110 DLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAY-SGTLQSLHPLGCNIINVASDESGIVP 168
Query: 166 ------AKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMV 219
W+ + DA + + N NP GN T + ++I E A+K ++
Sbjct: 169 DSLRDILSRWKPE-DAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLI 227
Query: 220 IADEVYDHLAFGN---TPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGIL 276
I D+ Y L F F+ M V G ++ + I I G R+G+L P
Sbjct: 228 IEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKI----ISSGLRIGFLTGPKP---- 279
Query: 277 QDSGIVDSIKSFLNISS-DPATFIQGAVPQILEKTEEE-----------FFSKITDILRE 324
+++ + + +S+ P+TF Q + Q+L + EE F+S D +
Sbjct: 280 ----LIERVILHIQVSTLHPSTFNQLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILA 335
Query: 325 TADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPG 384
AD L E P MF+ +K ++GIN E + A + V++LPG
Sbjct: 336 AADKWLTGLAEWHV------PAAGMFLWIK-----VKGINDVKELIEEKAVKMGVLMLPG 384
>pdb|2XH1|A Chain A, Crystal Structure Of Human Kat Ii-Inhibitor Complex
pdb|2XH1|B Chain B, Crystal Structure Of Human Kat Ii-Inhibitor Complex
Length = 425
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 118/303 (38%), Gaps = 58/303 (19%)
Query: 112 DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEV 171
D+ +T G Q + + ++ PG N+LL P + T L +++ E
Sbjct: 110 DLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAY-----SGTLQSLHPLGCNIINVASDES 164
Query: 172 DL---------------DAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLG 216
+ DA + + N NP GN T + ++I E A+K
Sbjct: 165 GIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYD 224
Query: 217 IMVIADEVYDHLAFGN---TPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPN 273
++I D+ Y L F F+ M V G ++ + I I G R+G+L P
Sbjct: 225 FLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKI----ISSGLRIGFLTGPKP- 279
Query: 274 GILQDSGIVDSIKSFLNISS-DPATFIQGAVPQILEKTEEE-----------FFSKITDI 321
+++ + + +S+ P+TF Q + Q+L + EE F+S D
Sbjct: 280 -------LIERVILHIQVSTLHPSTFNQLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDA 332
Query: 322 LRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIV 381
+ AD L E P MF+ +K ++GIN E + A + V++
Sbjct: 333 ILAAADKWLTGLAEWHV------PAAGMFLWIK-----VKGINDVKELIEEKAVKMGVLM 381
Query: 382 LPG 384
LPG
Sbjct: 382 LPG 384
>pdb|2R2N|A Chain A, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
pdb|2R2N|B Chain B, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
pdb|2R2N|C Chain C, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
pdb|2R2N|D Chain D, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
Length = 425
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 118/303 (38%), Gaps = 58/303 (19%)
Query: 112 DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEV 171
D+ +T G Q + + ++ PG N+LL P + T L +++ E
Sbjct: 110 DLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAY-----SGTLQSLHPLGCNIINVASDES 164
Query: 172 DL---------------DAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLG 216
+ DA + + N NP GN T + ++I E A+K
Sbjct: 165 GIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYD 224
Query: 217 IMVIADEVYDHLAFGN---TPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPN 273
++I D+ Y L F F+ M V G ++ + I I G R+G+L P
Sbjct: 225 FLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKI----ISSGLRIGFLTGPKP- 279
Query: 274 GILQDSGIVDSIKSFLNISS-DPATFIQGAVPQILEKTEEE-----------FFSKITDI 321
+++ + + +S+ P+TF Q + Q+L + EE F+S D
Sbjct: 280 -------LIERVILHIQVSTLHPSTFNQLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDA 332
Query: 322 LRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIV 381
+ AD L E P MF+ +K ++GIN E + A + V++
Sbjct: 333 ILAAADKWLTGLAEWHV------PAAGMFLWIK-----VKGINDVKELIEEKAVKMGVLM 381
Query: 382 LPG 384
LPG
Sbjct: 382 LPG 384
>pdb|3F6T|A Chain A, Crystal Structure Of Aspartate Aminotransferase (E.C.
2.6.1.1) (Yp_194538.1) From Lactobacillus Acidophilus
Ncfm At 2.15 A Resolution
pdb|3F6T|B Chain B, Crystal Structure Of Aspartate Aminotransferase (E.C.
2.6.1.1) (Yp_194538.1) From Lactobacillus Acidophilus
Ncfm At 2.15 A Resolution
Length = 533
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 88/214 (41%), Gaps = 22/214 (10%)
Query: 75 VRSARFNCYSSTVGILPARRAIADYLNRDLPYK----LSPDDVYLTLGCTQAIEVILTVL 130
V A N Y L I +Y ++L YK D++ T G T AI L
Sbjct: 125 VNGAVANNYPVPDRCLVNTEKIINYFLQELSYKDANLAEQTDLFPTEGGTAAIVYAFHSL 184
Query: 131 A-----RPGANILLPRPGFPYYEARATHSHLEVRHFDL--LPAKGWEVDLDAVEALADEN 183
A + G I + P F Y E+ DL WE++ + +E L D +
Sbjct: 185 AENHLLKKGDKIAINEPIFTPYLRIPELKDYELVEVDLHSYEKNDWEIEPNEIEKLKDPS 244
Query: 184 TVALVIINPGNPCGNVYTYQHLQKIAETAKKL-GIMVIADEVYDHLAFGNTPFVP-MGVF 241
AL+++NP NP + L I + +K + +I+DEVY FVP
Sbjct: 245 IKALIVVNPTNPTSKEFDTNALNAIKQAVEKNPKLXIISDEVY-------GAFVPNFKSI 297
Query: 242 GSIVPVLT--LGSISKRWIVPGWRLGWLVTSDPN 273
S+VP T + S S + GWRLG + ++ N
Sbjct: 298 YSVVPYNTXLVYSYSXLFGCTGWRLGVIALNEKN 331
>pdb|2QLR|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2QLR|B Chain B, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2QLR|C Chain C, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2QLR|D Chain D, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|3DC1|A Chain A, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
pdb|3DC1|B Chain B, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
pdb|3DC1|C Chain C, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
pdb|3DC1|D Chain D, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
Length = 425
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 122/300 (40%), Gaps = 52/300 (17%)
Query: 112 DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHS------HLEVRHFDLLP 165
D+ +T G Q + + ++ PG N+LL P + ++ H ++ ++P
Sbjct: 110 DLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSG-TLQSLHPLGCNIINVASDESGIVP 168
Query: 166 ------AKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMV 219
W+ + DA + + N NP GN T + ++I E A+K ++
Sbjct: 169 DSLRDILSRWKPE-DAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLI 227
Query: 220 IADEVYDHLAFGN---TPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGIL 276
I D+ Y L F F+ M V G ++ + I I G R+G+L P
Sbjct: 228 IEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSXI----ISSGLRIGFLTGPKP---- 279
Query: 277 QDSGIVDSIKSFLNISS-DPATFIQGAVPQILEKTEEE-----------FFSKITDILRE 324
+++ + + +S+ P+TF Q + Q+L + EE F+S D +
Sbjct: 280 ----LIERVILHIQVSTLHPSTFNQLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILA 335
Query: 325 TADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPG 384
AD L E P MF+ +K ++GIN E + A + V++LPG
Sbjct: 336 AADKWLTGLAEWHV------PAAGMFLWIK-----VKGINDVKELIEEKAVKMGVLMLPG 384
>pdb|2VGZ|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2VGZ|B Chain B, Crystal Structure Of Human Kynurenine Aminotransferase Ii
Length = 427
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 118/303 (38%), Gaps = 58/303 (19%)
Query: 112 DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEV 171
D+ +T G Q + + ++ PG N+LL P + T L +++ E
Sbjct: 112 DLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAY-----SGTLQSLHPLGCNIINVASDES 166
Query: 172 DL---------------DAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLG 216
+ DA + + N NP GN T + ++I E A+K
Sbjct: 167 GIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYD 226
Query: 217 IMVIADEVYDHLAFGN---TPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPN 273
++I D+ Y L F F+ M V G ++ + I I G R+G+L P
Sbjct: 227 FLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSXI----ISSGLRIGFLTGPKP- 281
Query: 274 GILQDSGIVDSIKSFLNISS-DPATFIQGAVPQILEKTEEE-----------FFSKITDI 321
+++ + + +S+ P+TF Q + Q+L + EE F+S D
Sbjct: 282 -------LIERVILHIQVSTLHPSTFNQLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDA 334
Query: 322 LRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIV 381
+ AD L E P MF+ +K ++GIN E + A + V++
Sbjct: 335 ILAAADKWLTGLAEWHV------PAAGMFLWIK-----VKGINDVKELIEEKAVKMGVLM 383
Query: 382 LPG 384
LPG
Sbjct: 384 LPG 386
>pdb|2Z1Z|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With L-malate Ion
pdb|2Z1Z|B Chain B, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With L-malate Ion
pdb|3EI5|A Chain A, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Glu: An
External Aldimine Mimic
pdb|3EI5|B Chain B, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Glu: An
External Aldimine Mimic
pdb|3EI6|A Chain A, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Dap: An
External Aldimine Mimic
pdb|3EI6|B Chain B, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Dap: An
External Aldimine Mimic
pdb|3EI7|A Chain A, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana (No Plp)
pdb|3EI7|B Chain B, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana (No Plp)
Length = 432
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 97/249 (38%), Gaps = 26/249 (10%)
Query: 47 LIPLGHGDPSA-FPSFRTASVAVDAIVHSVRSAR-FNCYSSTVGILPARRAIADYLNRDL 104
+I LG GD + P T+++A A H + + ++ Y + G P R AIA L
Sbjct: 58 VISLGIGDTTEPIPEVITSAMAKKA--HELSTIEGYSGYGAEQGAKPLRAAIAKTFYGGL 115
Query: 105 PYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARAT------------ 152
+ DDV+++ G I L V+ I + P +P Y +
Sbjct: 116 --GIGDDDVFVSDGAKCDISR-LQVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDV 172
Query: 153 HSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETA 212
+ + + P G+ DL V T + +P NP G T + L ++ E A
Sbjct: 173 QKYGNIEYMRCTPENGFFPDLSTVG-----RTDIIFFCSPNNPTGAAATREQLTQLVEFA 227
Query: 213 KKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDP 272
KK G +++ D Y + P + G+ + S SK G RLGW V P
Sbjct: 228 KKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSKYAGFTGVRLGWTVI--P 285
Query: 273 NGILQDSGI 281
+L G
Sbjct: 286 KKLLYSDGF 294
>pdb|3FFH|A Chain A, The Crystal Structure Of Histidinol-phosphate
Aminotransferase From Listeria Innocua Clip11262.
pdb|3FFH|B Chain B, The Crystal Structure Of Histidinol-phosphate
Aminotransferase From Listeria Innocua Clip11262
Length = 363
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 58/133 (43%), Gaps = 9/133 (6%)
Query: 93 RRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARAT 152
R+ +AD+ Y+L +++ T G + IE++ VL N + P F Y A
Sbjct: 73 RKEVADF------YQLEEEELIFTAGVDELIELLTRVLLDTTTNTVXATPTFVQYRQNAL 126
Query: 153 HSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETA 212
EVR LL + E DL+ DE T + I NP NP GN +Q +
Sbjct: 127 IEGAEVREIPLL--QDGEHDLEGXLNAIDEKTTIVWICNPNNPTGNYIELADIQAFLDRV 184
Query: 213 KKLGIMVIADEVY 225
++V+ DE Y
Sbjct: 185 PS-DVLVVLDEAY 196
>pdb|4FL0|A Chain A, Crystal Structure Of Ald1 From Arabidopsis Thaliana
pdb|4FL0|B Chain B, Crystal Structure Of Ald1 From Arabidopsis Thaliana
Length = 456
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 116/282 (41%), Gaps = 26/282 (9%)
Query: 36 LENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSAR-FNCYSSTVGILPARR 94
LE++ K+ LI LG GD + P + + H + + + Y G R+
Sbjct: 61 LEHIEKHPNVQLISLGTGDTTE-PIPEQITSHMSNFAHGLSTVEGYRGYGLEQGNKTLRK 119
Query: 95 AIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYE------ 148
AIA+ RDL K ++V+++ G I L +L I + P FP Y
Sbjct: 120 AIAETFYRDLHVK--SNEVFVSDGAQSDISR-LQLLLGSNVTIAVQDPTFPAYIDSSVII 176
Query: 149 ARATHSHLEVRHFDLL------PAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTY 202
+ H H + + + + P + DL A+ D + +P NP G V +
Sbjct: 177 GQTGHFHEKTKKYQNVVYMPCGPNNSFFPDL-AMTPRTD----VIFFCSPNNPTGYVASR 231
Query: 203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGW 262
+ L ++ + AK G ++I D Y +P + G+ + + S SK G
Sbjct: 232 KQLHQLVDFAKTNGSIIIFDSAYAAFIEDGSPRSIYEIPGAREVAIEVSSFSKFAGFTGV 291
Query: 263 RLGWLVTSDPNGILQDSG--IVDSIKSFLNISSDPATFIQGA 302
RLGW + P+ +L +G I++ + S + A+ I A
Sbjct: 292 RLGWSII--PDELLYSNGFPIINDFHRIVTTSFNGASNIAQA 331
>pdb|3EIA|A Chain A, Crystal Structure Of K270q Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-Glu: External Aldimine Form
pdb|3EIA|B Chain B, Crystal Structure Of K270q Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-Glu: External Aldimine Form
Length = 432
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 97/249 (38%), Gaps = 26/249 (10%)
Query: 47 LIPLGHGDPSA-FPSFRTASVAVDAIVHSVRSAR-FNCYSSTVGILPARRAIADYLNRDL 104
+I LG GD + P T+++A A H + + ++ Y + G P R AIA L
Sbjct: 58 VISLGIGDTTEPIPEVITSAMAKKA--HELSTIEGYSGYGAEQGAKPLRAAIAKTFYGGL 115
Query: 105 PYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARAT------------ 152
+ DDV+++ G I L V+ I + P +P Y +
Sbjct: 116 --GIGDDDVFVSDGAKCDISR-LQVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDV 172
Query: 153 HSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETA 212
+ + + P G+ DL V T + +P NP G T + L ++ E A
Sbjct: 173 QKYGNIEYMRCTPENGFFPDLSTVG-----RTDIIFFCSPNNPTGAAATREQLTQLVEFA 227
Query: 213 KKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDP 272
KK G +++ D Y + P + G+ + S S+ G RLGW V P
Sbjct: 228 KKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSQYAGFTGVRLGWTVI--P 285
Query: 273 NGILQDSGI 281
+L G
Sbjct: 286 KKLLYSDGF 294
>pdb|3G7Q|A Chain A, Crystal Structure Of Valine-Pyruvate Aminotransferase Avta
(Np_462565.1) From Salmonella Typhimurium Lt2 At 1.80 A
Resolution
Length = 417
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 99/419 (23%), Positives = 165/419 (39%), Gaps = 52/419 (12%)
Query: 18 EELKTASGITVRGVLNSLLENLNKNDTRP-LIPLGHGDPSAFPSFRTA-SVAVDAIVHSV 75
++ SGIT L E+LN P I LG G+P+ P+ + + V S
Sbjct: 9 DKFTRHSGIT------RLXEDLNDGLRTPGAIXLGGGNPAHIPAXQDYFQTLLTDXVESG 62
Query: 76 RSARFNC-YSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPG 134
++A C Y G A+A L L + + P ++ LT G A + + A
Sbjct: 63 KAADALCNYDGPQGKTALLNALAVLLRETLGWDIEPQNIALTNGSQSAFFYLFNLFAGRR 122
Query: 135 AN-----ILLP-RPGFPYYEARATHSHLEVR---HFDLLPAKGWEVDLDAVEALADENTV 185
A+ +L P P + Y L V + +LLP ++ +D E T
Sbjct: 123 ADGSTKKVLFPLAPEYIGYADSGLEDDLFVSARPNIELLPEGQFKYHVDFEHLHIGEETG 182
Query: 186 ALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIV 245
+ + P NP GNV T + L K+ A + I ++ D Y PF P +F
Sbjct: 183 XICVSRPTNPTGNVITDEELXKLDRLANQHNIPLVIDNAY------GVPF-PGIIFSEAR 235
Query: 246 P-----VLTLGSISKRWIVPGWRLGWLVTSDP--NGILQDSGIVDSIKSFLNISSDPATF 298
P ++ S+SK + PG R G ++ +D I +GI+ +
Sbjct: 236 PLWNPNIILCXSLSKLGL-PGSRCGIIIANDKTITAIANXNGIISLAPGGXGPAXXCEXI 294
Query: 299 IQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYS 358
+ + ++ E + F+ + +++T I L E C+ KPEG++F+ +
Sbjct: 295 KRNDLLRLSETVIKPFYYQ---RVQQTIAIIRRYLSEERCLI--HKPEGAIFLWL----- 344
Query: 359 LLEGINSDMEFALKLAKEESVIVLPG--ITVGL-KDW------LRITFAVEPSALEDGL 408
+ + E + K V+ +PG GL K W R + EP +E G+
Sbjct: 345 WFKDLPITTELLYQRLKARGVLXVPGHYFFPGLDKPWPHTHQCXRXNYVPEPDKIEAGV 403
>pdb|1D2F|A Chain A, X-Ray Structure Of Maly From Escherichia Coli: A
Pyridoxal-5'- Phosphate-Dependent Enzyme Acting As A
Modulator In Mal Gene Expression
pdb|1D2F|B Chain B, X-Ray Structure Of Maly From Escherichia Coli: A
Pyridoxal-5'- Phosphate-Dependent Enzyme Acting As A
Modulator In Mal Gene Expression
Length = 390
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 110/260 (42%), Gaps = 39/260 (15%)
Query: 166 AKGWEVDLDAVEA-LADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEV 224
A GW D+ +EA LA +++ +P NP G V+T L+ +A+ ++ G+ VI+DE+
Sbjct: 144 ADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEI 203
Query: 225 YDHLAFGNTPFVPMG-VFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVD 283
+ + +G P +P V +LT G SK + +P + GI+++S D
Sbjct: 204 HMDMVWGEQPHIPWSNVARGDWALLTSG--SKSFNIPA-------LTGAYGIIENSSSRD 254
Query: 284 ------------SIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCD 331
S S L +++ A + QGA + + L++ D
Sbjct: 255 AYLSALKGRDGLSSPSVLALTAHIAAYQQGA----------PWLDALRIYLKDNLTYIAD 304
Query: 332 RLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL-- 389
++ + P+ + + L ++ D L ++E V ++PG T G
Sbjct: 305 KMNAAFPELNWQIPQSTYLAWLDLRPLNID----DNALQKALIEQEKVAIMPGYTYGEEG 360
Query: 390 KDWLRITFAVEPSALEDGLG 409
+ ++R+ S LE G+
Sbjct: 361 RGFVRLNAGCPRSKLEKGVA 380
>pdb|3EI8|A Chain A, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With Ll-Dap: External Aldimine Form
pdb|3EI8|B Chain B, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With Ll-Dap: External Aldimine Form
pdb|3EI9|A Chain A, Crystal Structure Of K270n Variant Of Ll-diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-glu: External Aldimine Form
pdb|3EI9|B Chain B, Crystal Structure Of K270n Variant Of Ll-diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-glu: External Aldimine Form
pdb|3EIB|A Chain A, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana
pdb|3EIB|B Chain B, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana
Length = 432
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 96/249 (38%), Gaps = 26/249 (10%)
Query: 47 LIPLGHGDPSA-FPSFRTASVAVDAIVHSVRSAR-FNCYSSTVGILPARRAIADYLNRDL 104
+I LG GD + P T+++A A H + + ++ Y + G P R AIA L
Sbjct: 58 VISLGIGDTTEPIPEVITSAMAKKA--HELSTIEGYSGYGAEQGAKPLRAAIAKTFYGGL 115
Query: 105 PYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARAT------------ 152
+ DDV+++ G I L V+ I + P +P Y +
Sbjct: 116 --GIGDDDVFVSDGAKCDISR-LQVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDV 172
Query: 153 HSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETA 212
+ + + P G+ DL V T + +P NP G T + L ++ E A
Sbjct: 173 QKYGNIEYMRCTPENGFFPDLSTVG-----RTDIIFFCSPNNPTGAAATREQLTQLVEFA 227
Query: 213 KKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDP 272
KK G +++ D Y + P + G+ + S S G RLGW V P
Sbjct: 228 KKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSNYAGFTGVRLGWTVI--P 285
Query: 273 NGILQDSGI 281
+L G
Sbjct: 286 KKLLYSDGF 294
>pdb|1C7N|A Chain A, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|B Chain B, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|C Chain C, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|D Chain D, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|E Chain E, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|F Chain F, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|G Chain G, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|H Chain H, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7O|A Chain A, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|B Chain B, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|C Chain C, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|D Chain D, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|E Chain E, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|F Chain F, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|G Chain G, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|H Chain H, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
Length = 399
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 87/189 (46%), Gaps = 12/189 (6%)
Query: 93 RRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRP-GFPYYEARA 151
++ + ++ + + D + T G A+ + +PG +++ P +P++ A
Sbjct: 72 KKTVKKWMKDRHQWDIQTDWIINTAGVVPAVFNAVREFTKPGDGVIIITPVYYPFFMA-I 130
Query: 152 THSHLEVRHFDLLPAKGW-EVDLDAVEALA-DENTVALVIINPGNPCGNVYTYQHLQKIA 209
+ ++ +LL G+ +D +E L+ D+N AL+ +P NP G V+ LQKI
Sbjct: 131 KNQERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVWKKDELQKIK 190
Query: 210 ETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVL-----TLGSISKRWIVPGWRL 264
+ K +M+ +DE++ L P VF SI L T + SK + + G +
Sbjct: 191 DIVLKSDLMLWSDEIHFDLIM---PGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGM 247
Query: 265 GWLVTSDPN 273
++ +P+
Sbjct: 248 SNIIIKNPD 256
>pdb|3FDB|A Chain A, Crystal Structure Of A Putative Plp-Dependent
Beta-Cystathionase (Aecd, Dip1736) From Corynebacterium
Diphtheriae At 1.99 A Resolution
Length = 377
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 74/365 (20%), Positives = 143/365 (39%), Gaps = 30/365 (8%)
Query: 61 FRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT 120
F T + AI +V+ F Y +L +A A++ Y+ P+ ++
Sbjct: 35 FSTCPAVLQAITDAVQREAFG-YQPDGSLL--SQATAEFYADRYGYQARPEWIFPIPDVV 91
Query: 121 QAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALA 180
+ + + + + +++P P +P + + + E D A G ++L VE
Sbjct: 92 RGLYIAIDHFTPAQSKVIVPTPAYPPFFHLLSATQREGIFID---ATG-GINLHDVEKGF 147
Query: 181 DENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGV 240
++++ NP NP G V+ + L ++ + A + V+ DE++ L F V GV
Sbjct: 148 QAGARSILLCNPYNPLGXVFAPEWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGV 207
Query: 241 FGSIVPV-LTLGSISKRWIVPGWRLGWLVTSDPNGI---LQDSGIVDSIKSFLNISSDPA 296
+ V +T+ + S W + G + ++ S+P+ Q S ++ S L + + A
Sbjct: 208 SDTAASVCITITAPSXAWNIAGLKCAQIIFSNPSDAEHWQQLSPVIKDGASTLGLIAAEA 267
Query: 297 TFIQGAVPQILEKTEEEFFSKITDILRETADICCDRL-KEIPCITCPKKPEGSMFVMVKL 355
+ G +F ++ L+ D + K IP + + +
Sbjct: 268 AYRYGT----------DFLNQEVAYLKNNHDFLLHEIPKRIPGAKITPX-QATYLXWIDF 316
Query: 356 NYSLLEGINSDMEFALKLAKEESVIVLPGITVGLK--DWLRITFAVEPSALEDGLGRMKA 413
+ +EG S EF ++ AK V G G + R+ FA LE+ + R
Sbjct: 317 RDTTIEG--SPSEFFIEKAK---VAXNDGAWFGEDGTGFCRLNFATSREVLEEAIDRXAK 371
Query: 414 FYDRH 418
H
Sbjct: 372 AVSHH 376
>pdb|2Z20|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana
pdb|2Z20|B Chain B, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana
Length = 432
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 94/249 (37%), Gaps = 26/249 (10%)
Query: 47 LIPLGHGDPSA-FPSFRTASVAVDAIVHSVRSAR-FNCYSSTVGILPARRAIADYLNRDL 104
+I LG GD + P T++ A A H + + ++ Y + G P R AIA L
Sbjct: 58 VISLGIGDTTEPIPEVITSAXAKKA--HELSTIEGYSGYGAEQGAKPLRAAIAKTFYGGL 115
Query: 105 PYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARAT------------ 152
+ DDV+++ G I L V I + P +P Y +
Sbjct: 116 --GIGDDDVFVSDGAKCDISR-LQVXFGSNVTIAVQDPSYPAYVDSSVIXGQTGQFNTDV 172
Query: 153 HSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETA 212
+ + + P G+ DL V T + +P NP G T + L ++ E A
Sbjct: 173 QKYGNIEYXRCTPENGFFPDLSTVG-----RTDIIFFCSPNNPTGAAATREQLTQLVEFA 227
Query: 213 KKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDP 272
KK G +++ D Y + P + G+ S SK G RLGW V P
Sbjct: 228 KKNGSIIVYDSAYAXYXSDDNPRSIFEIPGAEEVAXETASFSKYAGFTGVRLGWTVI--P 285
Query: 273 NGILQDSGI 281
+L G
Sbjct: 286 KKLLYSDGF 294
>pdb|2O1B|A Chain A, Structure Of Aminotransferase From Staphylococcus Aureus
Length = 404
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 133/344 (38%), Gaps = 43/344 (12%)
Query: 83 YSSTVGILPARRAIADYLNRDLPYKLSPDD-VYLTLGCTQAIEVILTVLARPGANILLPR 141
Y + G ++AI D+ R L +D V + G + + T + PG +LLP
Sbjct: 81 YGAFHGKEAFKQAIVDFYQRQYNVTLDKEDEVCILYGTKNGLVAVPTCVINPGDYVLLPD 140
Query: 142 PGFPYY-------EARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGN 194
PG+ Y + + +LE H+ LP D V++ + T + + P N
Sbjct: 141 PGYTDYLAGVLLADGKPVPLNLEPPHY--LP------DWSKVDSQIIDKTKLIYLTYPNN 192
Query: 195 PCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAF-GNTPFVPMGVFGSIVPVLTLGSI 253
P G+ T + + K ++ D Y F P + G V + + S+
Sbjct: 193 PTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDAKNPSILASENGKDV-AIEIYSL 251
Query: 254 SKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQGAVPQILEKTEEE 313
SK + G+R+G+ V G D I++ + GA L+
Sbjct: 252 SKGYNXSGFRVGFAV-----------GNKDXIQALKKYQTHTNAGXFGA----LQDAAIY 296
Query: 314 FFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLN-YSLLE---GINSDMEF 369
+ D L E +++ R FV K Y LE G +S+ +F
Sbjct: 297 ALNHYDDFLEEQSNVFKTRRDRFEAXLAKAD---LPFVHAKGGIYVWLETPPGYDSE-QF 352
Query: 370 ALKLAKEESVIVLPGITVGLKD--WLRITFAVEPSALEDGLGRM 411
L +E+S++V PG G ++RI+ A++ L++ R+
Sbjct: 353 EQFLVQEKSILVAPGKPFGENGNRYVRISLALDDQKLDEAAIRL 396
>pdb|3DZZ|A Chain A, Crystal Structure Of A Putative Plp-Dependent
Aminotransferase (Lbul_1103) From Lactobacillus
Delbrueckii Subsp. At 1.61 A Resolution
pdb|3DZZ|B Chain B, Crystal Structure Of A Putative Plp-Dependent
Aminotransferase (Lbul_1103) From Lactobacillus
Delbrueckii Subsp. At 1.61 A Resolution
Length = 391
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 75/170 (44%), Gaps = 15/170 (8%)
Query: 94 RAIADYLNRDLPYKLSPDDVYLTL--GCTQAIEVILTVLARPGANILLPRPGFPYYEARA 151
+A+AD+ ++ ++ P + + G AI + PG IL+ P + + +
Sbjct: 69 KAVADW--EEIEHRARPKEDWCVFASGVVPAISAXVRQFTSPGDQILVQEPVYNXFYSVI 126
Query: 152 THSHLEVRHFDLLPAKG-WEVDL-DAVEALADENTVALVIINPGNPCGNVYTYQHLQKIA 209
+ V DL+ + V+ D E LA + V NP NP G ++ + +++IA
Sbjct: 127 EGNGRRVISSDLIYENSKYSVNWADLEEKLATPSVRXXVFCNPHNPIGYAWSEEEVKRIA 186
Query: 210 ETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIV 259
E K +++I+DE++ L + I P T+ +K W+V
Sbjct: 187 ELCAKHQVLLISDEIHGDLVLTDE---------DITPAFTVDWDAKNWVV 227
>pdb|3EUC|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
(Yp_297314.1) From Ralstonia Eutropha Jmp134 At 2.05 A
Resolution
pdb|3EUC|B Chain B, Crystal Structure Of Histidinol-Phosphate Aminotransferase
(Yp_297314.1) From Ralstonia Eutropha Jmp134 At 2.05 A
Resolution
Length = 367
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 84/185 (45%), Gaps = 17/185 (9%)
Query: 112 DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKG-WE 170
+V L G + I + ARPGA + P PGF Y A + LE F +P + +
Sbjct: 87 EVLLGNGSDEIISXLALAAARPGAKVXAPVPGFVXYAXSAQFAGLE---FVGVPLRADFT 143
Query: 171 VDLDAVEALADENTVALVIIN-PGNPCGNVYTYQHLQKIAETAKK--LGIMVIADEVYDH 227
+D A A E+ A+V + P NP GN++ + I A+ +V+ DE Y
Sbjct: 144 LDRGAXLAAXAEHQPAIVYLAYPNNPTGNLFDAADXEAIVRAAQGSVCRSLVVVDEAYQP 203
Query: 228 LAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKS 287
A + + FG++ L ++SK + G RLG+ V DP + Q +D ++
Sbjct: 204 FA-QESWXSRLTDFGNL---LVXRTVSKLGLA-GIRLGY-VAGDPQWLEQ----LDKVRP 253
Query: 288 FLNIS 292
N++
Sbjct: 254 PYNVN 258
>pdb|1GEW|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
Complexed With Pyridoxal 5'-Phosphate
pdb|1GEX|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
Complexed With Histidinol-Phosphate
pdb|1GEY|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
Complexed With N-(5'-Phosphopyridoxyl)-L-Glutamate
pdb|1IJI|A Chain A, Crystal Structure Of L-histidinol Phosphate
Aminotransferase With Plp
Length = 356
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 73/166 (43%), Gaps = 10/166 (6%)
Query: 108 LSPDDVYLTLGCTQAIEVILTVLARPGAN-ILLPRPGFPYYEARATHSHLEVRHFDLLPA 166
+ P+ V ++ G + IE+++ PG + IL P + Y A +E R L
Sbjct: 73 VKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVECRTVPTL-- 130
Query: 167 KGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYD 226
W++DL + D V V +P NP G + Q + + E + I V+ADE Y
Sbjct: 131 DNWQLDLQGISDKLDGVKVVYVC-SPNNPTGQLINPQDFRTLLELTRGKAI-VVADEAYI 188
Query: 227 HLAFGNTPFVPMGVFGSIVPVLT-LGSISKRWIVPGWRLGWLVTSD 271
P + + + P L L ++SK + + G R G+ + ++
Sbjct: 189 EFC----PQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLANE 230
>pdb|1FG3|A Chain A, Crystal Structure Of L-Histidinol Phosphate
Aminotransferase Complexed With L-Histidinol
pdb|1FG7|A Chain A, Crystal Structure Of L-Histidinol Phosphate
Aminotransferase With Pyridoxal-5'-Phosphate
Length = 356
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 73/166 (43%), Gaps = 10/166 (6%)
Query: 108 LSPDDVYLTLGCTQAIEVILTVLARPGAN-ILLPRPGFPYYEARATHSHLEVRHFDLLPA 166
+ P+ V ++ G + IE+++ PG + IL P + Y A +E R L
Sbjct: 73 VKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGXYSVSAETIGVECRTVPTL-- 130
Query: 167 KGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYD 226
W++DL + D V V +P NP G + Q + + E + I V+ADE Y
Sbjct: 131 DNWQLDLQGISDKLDGVKVVYVC-SPNNPTGQLINPQDFRTLLELTRGKAI-VVADEAYI 188
Query: 227 HLAFGNTPFVPMGVFGSIVPVLT-LGSISKRWIVPGWRLGWLVTSD 271
P + + + P L L ++SK + + G R G+ + ++
Sbjct: 189 EFC----PQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLANE 230
>pdb|3NRA|A Chain A, Crystal Structure Of An Aspartate Aminotransferase
(Yp_354942.1) From Rhodobacter Sphaeroides 2.4.1 At 2.15
A Resolution
pdb|3NRA|B Chain B, Crystal Structure Of An Aspartate Aminotransferase
(Yp_354942.1) From Rhodobacter Sphaeroides 2.4.1 At 2.15
A Resolution
Length = 407
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Query: 171 VDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAF 230
+DL +E + NP NP G VY+ + + +IA A + G VIAD++Y L +
Sbjct: 167 LDLTGLEEAFKAGARVFLFSNPNNPAGVVYSAEEIGQIAALAARYGATVIADQLYSRLRY 226
Query: 231 GNTPFVPMGVFGSIVP--VLTLGSISKRWIVPGWRLG 265
+ + ++ V+T+ S + G+RLG
Sbjct: 227 AGASYTHLRAEAAVDAENVVTIXGPSXTESLSGYRLG 263
>pdb|3CQ5|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum In Complex With Pmp
pdb|3CQ5|B Chain B, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum In Complex With Pmp
pdb|3CQ5|C Chain C, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum In Complex With Pmp
Length = 369
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 81/181 (44%), Gaps = 12/181 (6%)
Query: 93 RRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARAT 152
R +A Y+ + ++ D+++ G + ++ +L PG L +P + + A
Sbjct: 75 RDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAFGGPGRTALGFQPSYSMHPILAK 134
Query: 153 HSHLEVRHFDLLPAKG--WEVDLD-AVEALADENTVALVIINPGNPCGNVYTYQHLQKIA 209
+H E + ++G + +D+D A+E + + + + P NP G+V + +++I
Sbjct: 135 GTHTEF----IAVSRGADFRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVERII 190
Query: 210 ETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVT 269
A + VI DE Y F +P + ++ ++SK + G RLG+ V
Sbjct: 191 NVAPGI---VIVDEAYAE--FSPSPSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVA 245
Query: 270 S 270
+
Sbjct: 246 N 246
>pdb|3CQ4|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum
pdb|3CQ4|B Chain B, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum
Length = 376
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 81/181 (44%), Gaps = 12/181 (6%)
Query: 93 RRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARAT 152
R +A Y+ + ++ D+++ G + ++ +L PG L +P + + A
Sbjct: 72 RDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAFGGPGRTALGFQPSYSMHPILAK 131
Query: 153 HSHLEVRHFDLLPAKG--WEVDLD-AVEALADENTVALVIINPGNPCGNVYTYQHLQKIA 209
+H E + ++G + +D+D A+E + + + + P NP G+V + +++I
Sbjct: 132 GTHTEF----IAVSRGADFRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVERII 187
Query: 210 ETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVT 269
A + VI DE Y F +P + ++ ++SK + G RLG+ V
Sbjct: 188 NVAPGI---VIVDEAYAE--FSPSPSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVA 242
Query: 270 S 270
+
Sbjct: 243 N 243
>pdb|3FTB|A Chain A, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
pdb|3FTB|B Chain B, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
pdb|3FTB|D Chain D, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
pdb|3FTB|E Chain E, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
Length = 361
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 84/179 (46%), Gaps = 20/179 (11%)
Query: 100 LNRDLPYKLSPDDVYLTLG--CTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLE 157
LN+ + L D+ + LG ++ IE+ +++ + IL+ P + YE A +
Sbjct: 66 LNKSIENYLKLKDIGIVLGNGASEIIELSISLFEK----ILIIVPSYAEYEINAKKHGVS 121
Query: 158 V--RHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCG---NVYTYQHLQKIAETA 212
V + D +E D + + D ++V +I NP NP G N + H+ K+AE
Sbjct: 122 VVFSYLDENMCIDYE---DIISKIDDVDSV--IIGNPNNPNGGLINKEKFIHVLKLAEEK 176
Query: 213 KKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD 271
KK +I DE + G+ +G + + + +++K + +PG R G+ +T++
Sbjct: 177 KK---TIIIDEAFIEFT-GDPSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNN 231
>pdb|3IF2|A Chain A, Crystal Structure Of Putative Amino-Acid Aminotransferase
(Yp_265399.1) From Psychrobacter Arcticum 273-4 At 2.50
A Resolution
pdb|3IF2|B Chain B, Crystal Structure Of Putative Amino-Acid Aminotransferase
(Yp_265399.1) From Psychrobacter Arcticum 273-4 At 2.50
A Resolution
Length = 444
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 65/170 (38%), Gaps = 27/170 (15%)
Query: 83 YSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGAN------ 136
YS+ G A+ + NR + L+ +++ LT G A + + N
Sbjct: 79 YSNPQGDSAFIDALVGFFNRHYDWNLTSENIALTNGSQNAFFYLFNLFGGAFVNEHSQDK 138
Query: 137 --------ILLPRP----GFPYYEARATHSHLEVRHFDLLPAKG------WEVDLDAVE- 177
ILLP G+ H + H D + G + VD +A+E
Sbjct: 139 ESKSVDKSILLPLTPEYIGYSDVHVEGQHFAAVLPHIDEVTHDGEEGFFKYRVDFEALEN 198
Query: 178 --ALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVY 225
AL + A+ P NP GNV T + +AE AK+ I +I D Y
Sbjct: 199 LPALKEGRIGAICCSRPTNPTGNVLTDEEXAHLAEIAKRYDIPLIIDNAY 248
>pdb|3CQ6|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum Holo-Form (Plp Covalently Bound )
pdb|3CQ6|C Chain C, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum Holo-Form (Plp Covalently Bound )
pdb|3CQ6|E Chain E, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum Holo-Form (Plp Covalently Bound )
Length = 369
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 80/181 (44%), Gaps = 12/181 (6%)
Query: 93 RRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARAT 152
R +A Y+ + ++ D+++ G + ++ +L PG L +P + + A
Sbjct: 75 RDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAFGGPGRTALGFQPSYSMHPILAK 134
Query: 153 HSHLEVRHFDLLPAKG--WEVDLD-AVEALADENTVALVIINPGNPCGNVYTYQHLQKIA 209
+H E + ++G + +D+D A+E + + + + P NP G+V + +++I
Sbjct: 135 GTHTEF----IAVSRGADFRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVERII 190
Query: 210 ETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVT 269
A + VI DE Y F +P + ++ ++S + G RLG+ V
Sbjct: 191 NVAPGI---VIVDEAYAE--FSPSPSATTLLEKYPTKLVVSRTMSXAFDFAGGRLGYFVA 245
Query: 270 S 270
+
Sbjct: 246 N 246
>pdb|3ASA|A Chain A, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Chlamydia Trachomatis
pdb|3ASB|A Chain A, Crystal Structure Of Plp-Bound Ll-Diaminopimelate
Aminotransferase From Chlamydia Trachomatis
Length = 400
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 68/154 (44%), Gaps = 14/154 (9%)
Query: 181 DENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGV 240
D + L + +P NP G V L+ I A + I+++ D Y F + P +P +
Sbjct: 161 DTHIDILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYS--TFISDPSLPKSI 218
Query: 241 F---GSIVPVLTLGSISKRWIVPGWRLGW------LVTSDPNGILQDSGIVDSIKSFLNI 291
F + + + S SK G RLGW L +D + ++QD + + N
Sbjct: 219 FEIPDARFCAIEINSFSKPLGFAGIRLGWTVIPQELTYADGHFVIQDWERF--LSTTFNG 276
Query: 292 SSDPATFIQGAVPQILEKTEE-EFFSKITDILRE 324
+S PA A IL + E ++ + +D+LR+
Sbjct: 277 ASIPAQEAGVAGLSILPQLEAIHYYRENSDLLRK 310
>pdb|3P1T|A Chain A, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
pdb|3P1T|B Chain B, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
pdb|3P1T|C Chain C, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
pdb|3P1T|D Chain D, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
Length = 337
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 103/260 (39%), Gaps = 38/260 (14%)
Query: 142 PGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYT 201
PGF Y AR S L RHF++ +D + + ++ ++ V V+ NP NP G +
Sbjct: 98 PGFDGYRARIAVSGL--RHFEIGLTDDLLLDPNDLAQVSRDDCV--VLANPSNPTGQALS 153
Query: 202 YQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGV-FGSIVPVLTLGSISKRWIVP 260
L ++ + A KL I DE Y + F G+ +G L S SK + +
Sbjct: 154 AGELDQLRQRAGKLLI----DETY----VDYSSFRARGLAYGE--NELVFRSFSKSYGLA 203
Query: 261 GWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITD 320
G RLG L P+ ++ + F N+ + ++ A+ ++ E +K
Sbjct: 204 GLRLGALFG--PSELI---AAXKRKQWFCNVGTLDLHALEAALDN--DRAREAHIAKTLA 256
Query: 321 ILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVI 380
R AD + G + N+ L+E N+ E L+ +E +
Sbjct: 257 QRRRVADAL--------------RGLGYRVASSEANFVLVE--NAAGERTLRFLRERGIQ 300
Query: 381 VLPGITVGLKDWLRITFAVE 400
V GL +RI+ E
Sbjct: 301 VKDAGQFGLHHHIRISIGRE 320
>pdb|2X5F|A Chain A, Crystal Structure Of The Methicillin-Resistant
Staphylococcus Aureus Sar2028, An
Aspartate_tyrosine_phenylalanine Pyridoxal-5'-Phosphate
Dependent Aminotransferase
pdb|2X5F|B Chain B, Crystal Structure Of The Methicillin-Resistant
Staphylococcus Aureus Sar2028, An
Aspartate_tyrosine_phenylalanine Pyridoxal-5'-Phosphate
Dependent Aminotransferase
Length = 430
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 114/266 (42%), Gaps = 25/266 (9%)
Query: 67 AVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDV---YLTLGCTQAI 123
++DA+ + + Y+ GI R + RD P +LS D++ +T T +
Sbjct: 68 SLDAMFNDLTPDEIFPYAPPQGIEELRDLWQQKMLRDNP-ELSIDNMSRPIVTNALTHGL 126
Query: 124 EVILTVLARPGANILLPRPGFPYYE-ARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE 182
++ + ILLP + Y+ T + ++ + + G VEAL
Sbjct: 127 SLVGDLFVNQDDTILLPEHNWGNYKLVFNTRNGANLQTYPIFDKDGHYTTDSLVEALQSY 186
Query: 183 NT--VALVIINPGNPCGNVYTYQHLQKIAETAKKLG-----IMVIADEVYDHL----AFG 231
N V +++ P NP G T++ + I E K L ++ + D+ Y L +
Sbjct: 187 NKDKVIMILNYPNNPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVYT 246
Query: 232 NTPFVPMGVFGS--IVPVLTLGSISKRWIVPGWRLGWLV--TSDPNGI-LQDSGIVDSIK 286
+ F + S I+P+ L +K + G+R+G++ TSD + ++ + I+
Sbjct: 247 QSLFTALTNLHSNAILPI-RLDGATKEFFAWGFRVGFMTFGTSDQTTKEVLEAKVKGLIR 305
Query: 287 SFLNISSDPATFIQGAVPQILEKTEE 312
S NISS P Q AV +L+ ++
Sbjct: 306 S--NISSGPLP-TQSAVKHVLKNNKQ 328
>pdb|1YOO|A Chain A, Aspartate Aminotransferase Mutant Atb17 With Isovaleric
Acid
Length = 396
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 5/121 (4%)
Query: 116 TLGCTQAIEVILTVLARPGA--NILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDL 173
T G T A+ V LA+ + + + PG+P +++ + LEVR + A+ +D
Sbjct: 100 TPGGTGALRVAADFLAKNTSVRRVWVSNPGWPTHKSVFNSAGLEVREYAYYDAENHTLDF 159
Query: 174 DAVEALADENTVALVIINPG---NPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAF 230
DA+ +E V++ G NP G T + Q +A+ + + G + + D Y A
Sbjct: 160 DALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFAR 219
Query: 231 G 231
G
Sbjct: 220 G 220
>pdb|2D64|A Chain A, Aspartate Aminotransferase Mutant Mabc With Isovaleric
Acid
pdb|2D65|A Chain A, Aspartate Aminotransferase Mutant Mabc
Length = 396
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 5/121 (4%)
Query: 116 TLGCTQAIEVILTVLARPGA--NILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDL 173
T G T A+ V LA+ + + + PG+P +++ + LEVR + A+ +D
Sbjct: 100 TPGGTGALRVAADFLAKNTSVKRVWVSNPGWPTHKSVFNSAGLEVREYAYYDAENHTLDF 159
Query: 174 DAVEALADENTVALVIINPG---NPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAF 230
DA+ +E V++ G NP G T + Q +A+ + + G + + D Y A
Sbjct: 160 DALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFAR 219
Query: 231 G 231
G
Sbjct: 220 G 220
>pdb|2D66|A Chain A, Aspartate Aminotransferase Mutant Mab
pdb|2D7Z|A Chain A, Aspartate Aminotransferase Mutant Mab Complexed With
Maleic Acid
Length = 396
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 5/121 (4%)
Query: 116 TLGCTQAIEVILTVLARPGA--NILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDL 173
T G T A+ V LA+ + + + PG+P +++ + LEVR + A+ +D
Sbjct: 100 TPGGTGALRVAADFLAKNTSVKRVWVSNPGWPTHKSVFNSAGLEVREYAYYDAENHTLDF 159
Query: 174 DAVEALADENTVALVIINPG---NPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAF 230
DA+ +E V++ G NP G T + Q +A+ + + G + + D Y A
Sbjct: 160 DALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFAR 219
Query: 231 G 231
G
Sbjct: 220 G 220
>pdb|3G0T|A Chain A, Crystal Structure Of Putative Aspartate Aminotransferase
(Np_905498.1) From Porphyromonas Gingivalis W83 At 1.75
A Resolution
pdb|3G0T|B Chain B, Crystal Structure Of Putative Aspartate Aminotransferase
(Np_905498.1) From Porphyromonas Gingivalis W83 At 1.75
A Resolution
Length = 437
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 62/171 (36%), Gaps = 4/171 (2%)
Query: 59 PSFRTASVAVDAIVHSVRSARFNCYSSTVGI----LPARRAIADYLNRDLPYKLSPDDVY 114
P + ++ + +R + Y + G+ A R ++N D+P + V
Sbjct: 54 PGLPAPQIGIETEIQKLREGVASIYPNLDGLPELKQEASRFAKLFVNIDIPARACVPTVG 113
Query: 115 LTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLD 174
GC + V L PGF + + + FDL +G ++
Sbjct: 114 SXQGCFVSFLVANRTHKNREYGTLFIDPGFNLNKLQCRILGQKFESFDLFEYRGEKLREK 173
Query: 175 AVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVY 225
L +++ NP NP T + L+ I E A K ++VI D Y
Sbjct: 174 LESYLQTGQFCSIIYSNPNNPTWQCXTDEELRIIGELATKHDVIVIEDLAY 224
>pdb|3FDD|A Chain A, The Crystal Structure Of The Pseudomonas Dacunhae
Aspartate-Beta- Decarboxylase Reveals A Novel Oligomeric
Assembly For A Pyridoxal-5- Phosphate Dependent Enzyme
Length = 533
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 59/150 (39%), Gaps = 12/150 (8%)
Query: 130 LARPGANILLPRPGF-PYYE-ARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVAL 187
L + G + + P F PY E LE + PA W+ ++ L D
Sbjct: 190 LLKAGDKVAIGMPVFTPYIEIPELAQYALEEVAINADPALNWQYPDSELDKLKDPAIKIF 249
Query: 188 VIINPGNPCGNVYTYQHLQKIAE--TAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIV 245
+NP NP + L+++ + + +M++ D+VY A G +I
Sbjct: 250 FCVNPSNPPSVKMDERSLERVRKIVAEHRPDLMILTDDVYGTFADGFQSLF------AIC 303
Query: 246 PVLTL--GSISKRWIVPGWRLGWLVTSDPN 273
P TL S SK + GWRLG + N
Sbjct: 304 PANTLLVYSFSKYFGATGWRLGVVAAHKEN 333
>pdb|2ZY2|A Chain A, Dodecameric L-Aspartate Beta-Decarboxylase
Length = 544
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 72/178 (40%), Gaps = 27/178 (15%)
Query: 112 DVYLTLGCTQAIEVI-----LTVLARPGANILLPRPGF-PYYE--ARATHSHLEVR-HFD 162
D++ G T A+ I ++ L + G + + P F PY E A + EV H D
Sbjct: 166 DLFAVEGGTAAMAYIFESLRISGLLKAGDKVAIGMPVFTPYIEIPELAQYDLKEVPIHAD 225
Query: 163 LLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAE--TAKKLGIMVI 220
P GW+ ++ L D + +NP NP + L ++ ++ ++++
Sbjct: 226 --PDNGWQYSDAELDKLKDPDVKIFFCVNPSNPPSVKMDQRSLDRVRAIVAEQRPDLLIL 283
Query: 221 ADEVYDHLAFGNTPFVPMGVFGSIVPV-----LTLGSISKRWIVPGWRLGWLVTSDPN 273
D+VY A F S+ V L + S SK + GWRLG + N
Sbjct: 284 TDDVYGTFA---------DEFQSLFSVCPRNTLLVYSFSKYFGATGWRLGVIAAHKDN 332
>pdb|1QIT|A Chain A, Aspartate Aminotransferase From Escherichia Coli, C191w
Mutation, With Bound Maleate
Length = 396
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 5/121 (4%)
Query: 116 TLGCTQAIEVILTVLARPGA--NILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDL 173
T G T A+ V LA+ + + + P +P +++ + LEVR + A+ +D
Sbjct: 100 TPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
Query: 174 DAVEALADENTVALVIINPG---NPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAF 230
DA+ +E V++ G NP G T + Q +A+ + + G + + D Y A
Sbjct: 160 DALINSLNEAQAGDVVLFHGWCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFAR 219
Query: 231 G 231
G
Sbjct: 220 G 220
>pdb|3MC6|C Chain C, Crystal Structure Of Scdpl1
Length = 497
Score = 36.6 bits (83), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 1/99 (1%)
Query: 115 LTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLD 174
L L C A L I+ P ++ A + +++RH +L P ++VDL
Sbjct: 139 LLLACLSAKMYALHHRGITEPEIIAPVTAHAGFDKAAYYFGMKLRHVELDPTT-YQVDLG 197
Query: 175 AVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAK 213
V+ ++NTV LV P P G + L KIA+ K
Sbjct: 198 KVKKFINKNTVLLVGSAPNFPHGIADDIEGLGKIAQKYK 236
>pdb|3MC6|A Chain A, Crystal Structure Of Scdpl1
Length = 497
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 1/99 (1%)
Query: 115 LTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLD 174
L L C A L I+ P ++ A + +++RH +L P ++VDL
Sbjct: 139 LLLACLSAKMYALHHRGITEPEIIAPVTAHAGFDKAAYYFGMKLRHVELDPTT-YQVDLG 197
Query: 175 AVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAK 213
V+ ++NTV LV P P G + L KIA+ K
Sbjct: 198 KVKKFINKNTVLLVGSAPNFPHGIADDIEGLGKIAQKYK 236
>pdb|2D5Y|A Chain A, Aspartate Aminotransferase Mutant Mc With Isovaleric Acid
Length = 396
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 5/121 (4%)
Query: 116 TLGCTQAIEVILTVLARPGA--NILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDL 173
T G T A+ V LA+ + + + P +P +++ + LEVR + A+ +D
Sbjct: 100 TPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
Query: 174 DAVEALADENTVALVIINPG---NPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAF 230
DA+ +E V++ G NP G T + Q +A+ + + G + + D Y A
Sbjct: 160 DALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFAR 219
Query: 231 G 231
G
Sbjct: 220 G 220
>pdb|1IX6|A Chain A, Aspartate Aminotransferase Active Site Mutant V39f
pdb|1IX7|A Chain A, Aspartate Aminotransferase Active Site Mutant V39f Maleate
Complex
Length = 396
Score = 36.6 bits (83), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 5/121 (4%)
Query: 116 TLGCTQAIEVILTVLARPGA--NILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDL 173
T G T A+ V LA+ + + + P +P +++ + LEVR + A+ +D
Sbjct: 100 TPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
Query: 174 DAVEALADENTVALVIINPG---NPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAF 230
DA+ +E V++ G NP G T + Q +A+ + + G + + D Y A
Sbjct: 160 DALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFAR 219
Query: 231 G 231
G
Sbjct: 220 G 220
>pdb|2D61|A Chain A, Aspartate Aminotransferase Mutant Ma With Maleic Acid
pdb|2D63|A Chain A, Aspartate Aminotransferase Mutant Ma With Isovaleric Acid
pdb|2D7Y|A Chain A, Aspartate Aminotransferase Mutant Ma
Length = 396
Score = 36.6 bits (83), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 5/121 (4%)
Query: 116 TLGCTQAIEVILTVLARPGA--NILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDL 173
T G T A+ V LA+ + + + P +P +++ + LEVR + A+ +D
Sbjct: 100 TPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
Query: 174 DAVEALADENTVALVIINPG---NPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAF 230
DA+ +E V++ G NP G T + Q +A+ + + G + + D Y A
Sbjct: 160 DALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFAR 219
Query: 231 G 231
G
Sbjct: 220 G 220
>pdb|4F5M|A Chain A, Wild-type E. Coli Aspartate Aminotransferase: A Template
For The Interconversion Of Substrate Specificity And
Activity To Tyrosine Aminotransferase By The Janus
Algorithm.
pdb|4F5M|B Chain B, Wild-type E. Coli Aspartate Aminotransferase: A Template
For The Interconversion Of Substrate Specificity And
Activity To Tyrosine Aminotransferase By The Janus
Algorithm
Length = 406
Score = 36.6 bits (83), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 5/121 (4%)
Query: 116 TLGCTQAIEVILTVLARPGA--NILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDL 173
T G T A+ V LA+ + + + P +P +++ + LEVR + A+ +D
Sbjct: 110 TPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 169
Query: 174 DAVEALADENTVALVIINPG---NPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAF 230
DA+ +E V++ G NP G T + Q +A+ + + G + + D Y A
Sbjct: 170 DALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFAR 229
Query: 231 G 231
G
Sbjct: 230 G 230
>pdb|1CZC|A Chain A, Aspartate Aminotransferase Mutant Atb17139S142N WITH
GLUTARIC ACID
pdb|1CZE|A Chain A, Aspartate Aminotransferase Mutant Atb17139S142N WITH
SUCCINIC ACID
Length = 396
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 5/121 (4%)
Query: 116 TLGCTQAIEVILTVLARPGA--NILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDL 173
T G T A+ V LA+ + + + P +P +++ + LEVR + A+ +D
Sbjct: 100 TPGGTGALRVAADFLAKNTSVRRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
Query: 174 DAVEALADENTVALVIINPG---NPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAF 230
DA+ +E V++ G NP G T + Q +A+ + + G + + D Y A
Sbjct: 160 DALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFAR 219
Query: 231 G 231
G
Sbjct: 220 G 220
>pdb|1AAM|A Chain A, The Structural Basis For The Altered Substrate Specificity
Of The R292d Active Site Mutant Of Aspartate
Aminotransferase From E. Coli
Length = 396
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 5/121 (4%)
Query: 116 TLGCTQAIEVILTVLARPGA--NILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDL 173
T G T A+ V LA+ + + + P +P +++ + LEVR + A+ +D
Sbjct: 100 TPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
Query: 174 DAVEALADENTVALVIINPG---NPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAF 230
DA+ +E V++ G NP G T + Q +A+ + + G + + D Y A
Sbjct: 160 DALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFAR 219
Query: 231 G 231
G
Sbjct: 220 G 220
>pdb|1QIS|A Chain A, Aspartate Aminotransferase From Escherichia Coli, C191f
Mutation, With Bound Maleate
Length = 396
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 5/121 (4%)
Query: 116 TLGCTQAIEVILTVLARPGA--NILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDL 173
T G T A+ V LA+ + + + P +P +++ + LEVR + A+ +D
Sbjct: 100 TPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
Query: 174 DAVEALADENTVALVIINPG---NPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAF 230
DA+ +E V++ G NP G T + Q +A+ + + G + + D Y A
Sbjct: 160 DALINSLNEAQAGDVVLFHGFCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFAR 219
Query: 231 G 231
G
Sbjct: 220 G 220
>pdb|2Q7W|A Chain A, Structural Studies Reveals The Inactivation Of E. Coli
L-Aspartate Aminotransferase
(S)-4,5-Amino-Dihydro-2-Thiophenecarboxylic Acid (Sadta)
Via Two Mechanisms At Ph 6.0
pdb|2QBT|A Chain A, Structural Studies Reveal The Inactivation Of E. Coli
L-Aspartate Aminotransferase By
(S)-4,5-Amino-Dihydro-2-Thiophenecarboxylic Acid (Sadta)
Via Two Mechanisms (At Ph 8.0)
pdb|2QA3|A Chain A, Structural Studies Reveal The Inactivation Of E. Coli
L-Aspartate Aminotransferase By
(S)-4,5-Amino-Dihydro-2-Thiophenecarboxylic Acid (Sadta)
Via Two Mechanisms (At Ph6.5)
pdb|2QB2|A Chain A, Structural Studies Reveal The Inactivation Of E. Coli
L-Aspartate Aminotransferase By
(S)-4,5-Dihydro-2thiophenecarboylic Acid (Sadta) Via Two
Mechanisms (At Ph 7.0).
pdb|2QB3|A Chain A, Structural Studies Reveal The Inactivation Of E. Coli
L-aspartate Aminotransferase By
(s)-4,5-dihydro-2-thiophenecarboxylic Acid (sadta) Via
Two Mechanisms (at Ph 7.5)
pdb|3QN6|A Chain A, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase Reconstituted With 1-Deaza-Pyridoxal
5'-Phosphate: Internal Aldimine And Stable L-Aspartate
External Aldimine
Length = 396
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 5/121 (4%)
Query: 116 TLGCTQAIEVILTVLARPGA--NILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDL 173
T G T A+ V LA+ + + + P +P +++ + LEVR + A+ +D
Sbjct: 100 TPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
Query: 174 DAVEALADENTVALVIINPG---NPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAF 230
DA+ +E V++ G NP G T + Q +A+ + + G + + D Y A
Sbjct: 160 DALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFAR 219
Query: 231 G 231
G
Sbjct: 220 G 220
>pdb|1ASL|A Chain A, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ASL|B Chain B, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ASM|A Chain A, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ASM|B Chain B, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ASN|A Chain A, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ASN|B Chain B, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ARG|A Chain A, Aspartate Aminotransferase, Phospho-5'-Pyridoxyl Aspartate
Complex
pdb|1ARG|B Chain B, Aspartate Aminotransferase, Phospho-5'-Pyridoxyl Aspartate
Complex
pdb|1C9C|A Chain A, Aspartate Aminotransferase Complexed With
C3-Pyridoxal-5'-Phosphate
pdb|1CQ6|A Chain A, Aspartate Aminotransferase Complex With
C4-Pyridoxal-5p-Phosphate
pdb|1CQ7|A Chain A, Aspartate Aminotransferase (E.C. 2.6.1.1) Complexed With
C5-Pyridoxal- 5p-Phosphate
pdb|1CQ8|A Chain A, Aspartate Aminotransferase (E.C. 2.6.1.1) Complexed With
C6-Pyridoxal- 5p-Phosphate
pdb|1X28|A Chain A, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-L-Glutamic Acid
pdb|1X28|B Chain B, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-L-Glutamic Acid
pdb|1X29|A Chain A, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-2-Methyl-L-Glutamic Acid
pdb|1X29|B Chain B, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-2-Methyl-L-Glutamic Acid
pdb|1X2A|A Chain A, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-D-Glutamic Acid
pdb|1X2A|B Chain B, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-D-Glutamic Acid
pdb|1AAW|A Chain A, The Structural Basis For The Altered Substrate Specificity
Of The R292d Active Site Mutant Of Aspartate
Aminotransferase From E. Coli
pdb|1AMQ|A Chain A, X-Ray Crystallographic Study Of Pyridoxamine
5'-Phosphate-Type Aspartate Aminotransferases From
Escherichia Coli In Three Forms
pdb|1AMR|A Chain A, X-Ray Crystallographic Study Of Pyridoxamine
5'-Phosphate-Type Aspartate Aminotransferases From
Escherichia Coli In Three Forms
pdb|1AMS|A Chain A, X-Ray Crystallographic Study Of Pyridoxamine
5'-Phosphate-Type Aspartate Aminotransferases From
Escherichia Coli In Three Forms
pdb|1ARS|A Chain A, X-ray Crystallographic Study Of Pyridoxal
5'-phosphate-type Aspartate Aminotransferases From
Escherichia Coli In Open And Closed Form
pdb|1ART|A Chain A, X-ray Crystallographic Study Of Pyridoxal
5'-phosphate-type Aspartate Aminotransferases From
Escherichia Coli In Open And Closed Form
pdb|1ASA|A Chain A, The Structural Basis For The Reduced Activity Of The
Y226f(Y225f) Active Site Mutant Of E. Coli Aspartate
Aminotransferase
pdb|1ASD|A Chain A, The Structure Of Wild Type E. Coli Aspartate
Aminotransferase Reconstituted With N-Meplp
pdb|1ASE|A Chain A, The Structure Of Wild Type E. Coli Aspartate
Aminotransferase Reconstituted With Plp-N-Oxide
pdb|3PA9|A Chain A, Mechanism Of Inactivation Of E. Coli Aspartate
Aminotransferase By
(S)-4-Amino-4,5-Dihydro-2-Furancarboxylic Acid (S-Adfa)
Ph 7.5
pdb|3PAA|A Chain A, Mechanism Of Inactivation Of E. Coli Aspartate
Aminotransferase By
(S)-4-Amino-4,5-Dihydro-2-Furancarboxylic Acid (S-Adfa)
Ph 8.0
pdb|3QPG|A Chain A, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase Reconstituted With 1-Deaza-Pyridoxal
5'-Phosphate: Internal Aldimine And Stable L-Aspartate
External Aldimine
Length = 396
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 5/121 (4%)
Query: 116 TLGCTQAIEVILTVLARPGA--NILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDL 173
T G T A+ V LA+ + + + P +P +++ + LEVR + A+ +D
Sbjct: 100 TPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
Query: 174 DAVEALADENTVALVIINPG---NPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAF 230
DA+ +E V++ G NP G T + Q +A+ + + G + + D Y A
Sbjct: 160 DALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFAR 219
Query: 231 G 231
G
Sbjct: 220 G 220
>pdb|1B4X|A Chain A, Aspartate Aminotransferase From E. Coli, C191s Mutation,
With Bound Maleate
pdb|5EAA|A Chain A, Aspartate Aminotransferase From E. Coli, C191s Mutation
Length = 396
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 5/121 (4%)
Query: 116 TLGCTQAIEVILTVLARPGA--NILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDL 173
T G T A+ V LA+ + + + P +P +++ + LEVR + A+ +D
Sbjct: 100 TPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
Query: 174 DAVEALADENTVALVIINPG---NPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAF 230
DA+ +E V++ G NP G T + Q +A+ + + G + + D Y A
Sbjct: 160 DALINSLNEAQAGDVVLFHGSCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFAR 219
Query: 231 G 231
G
Sbjct: 220 G 220
>pdb|2AAT|A Chain A, 2.8-Angstroms-Resolution Crystal Structure Of An
Active-Site Mutant Of Aspartate Aminotransferase From
Escherichia Coli
pdb|4DBC|A Chain A, Substrate Activation In Aspartate Aminotransferase
Length = 396
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 5/121 (4%)
Query: 116 TLGCTQAIEVILTVLARPGA--NILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDL 173
T G T A+ V LA+ + + + P +P +++ + LEVR + A+ +D
Sbjct: 100 TPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
Query: 174 DAVEALADENTVALVIINPG---NPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAF 230
DA+ +E V++ G NP G T + Q +A+ + + G + + D Y A
Sbjct: 160 DALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFAR 219
Query: 231 G 231
G
Sbjct: 220 G 220
>pdb|3AAT|A Chain A, Activity And Structure Of The Active-Site Mutants R386y
And R386f Of Escherichia Coli Aspartate Aminotransferase
Length = 396
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 5/121 (4%)
Query: 116 TLGCTQAIEVILTVLARPGA--NILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDL 173
T G T A+ V LA+ + + + P +P +++ + LEVR + A+ +D
Sbjct: 100 TPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
Query: 174 DAVEALADENTVALVIINPG---NPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAF 230
DA+ +E V++ G NP G T + Q +A+ + + G + + D Y A
Sbjct: 160 DALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFAR 219
Query: 231 G 231
G
Sbjct: 220 G 220
>pdb|1QIR|A Chain A, Aspartate Aminotransferase From Escherichia Coli, C191y
Mutation, With Bound Maleate
Length = 396
Score = 36.2 bits (82), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 5/121 (4%)
Query: 116 TLGCTQAIEVILTVLARPGA--NILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDL 173
T G T A+ V LA+ + + + P +P +++ + LEVR + A+ +D
Sbjct: 100 TPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
Query: 174 DAVEALADENTVALVIINPG---NPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAF 230
DA+ +E V++ G NP G T + Q +A+ + + G + + D Y A
Sbjct: 160 DALINSLNEAQAGDVVLFHGYCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFAR 219
Query: 231 G 231
G
Sbjct: 220 G 220
>pdb|1AIA|A Chain A, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking The
Pyridoxal-5'-Phosphate Binding Lysine Residue
pdb|1AIA|B Chain B, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking The
Pyridoxal-5'-Phosphate Binding Lysine Residue
pdb|1AIB|A Chain A, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking The
Pyridoxal-5'-Phosphate Binding Lysine Residue
pdb|1AIB|B Chain B, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking The
Pyridoxal-5'-Phosphate Binding Lysine Residue
pdb|1AIC|A Chain A, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking The
Pyridoxal-5'-Phosphate Binding Lysine Residue
pdb|1AIC|B Chain B, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking The
Pyridoxal-5'-Phosphate Binding Lysine Residue
Length = 396
Score = 36.2 bits (82), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 5/121 (4%)
Query: 116 TLGCTQAIEVILTVLARPGA--NILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDL 173
T G T A+ V LA+ + + + P +P +++ + LEVR + A+ +D
Sbjct: 100 TPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
Query: 174 DAVEALADENTVALVIINPG---NPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAF 230
DA+ +E V++ G NP G T + Q +A+ + + G + + D Y A
Sbjct: 160 DALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFAR 219
Query: 231 G 231
G
Sbjct: 220 G 220
>pdb|2F8J|A Chain A, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
pdb|2F8J|B Chain B, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
pdb|2F8J|C Chain C, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
pdb|2F8J|D Chain D, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
Length = 347
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 75/180 (41%), Gaps = 30/180 (16%)
Query: 96 IADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSH 155
I YL+ D LS ++V + G + I V++ + R ++ P P + Y A
Sbjct: 77 ILSYLDTDF---LSKNNVSVGNGADEIIYVMMLMFDR---SVFFP-PTYSCYRIFAKA-- 127
Query: 156 LEVRHFDLLPAKGWEV----DLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAET 211
+ AK EV DL E E V I NP NP G+V+ + +++I +T
Sbjct: 128 --------VGAKFLEVPLTKDLRIPEVNVGEGDVVF-IPNPNNPTGHVFEREEIERILKT 178
Query: 212 AKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD 271
G V DE Y F +V + + + SK + + R+G++V S+
Sbjct: 179 ----GAFVALDEAY--YEFHGESYVDF--LKKYENLAVIRTFSKAFSLAAQRVGYVVASE 230
>pdb|1UU1|A Chain A, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU1|B Chain B, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU1|C Chain C, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU1|D Chain D, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU2|A Chain A, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU2|B Chain B, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|A Chain A, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|B Chain B, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|C Chain C, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|D Chain D, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
Length = 335
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 75/180 (41%), Gaps = 30/180 (16%)
Query: 96 IADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSH 155
I YL+ D LS ++V + G + I V++ + R ++ P P + Y A
Sbjct: 65 ILSYLDTDF---LSKNNVSVGNGADEIIYVMMLMFDR---SVFFP-PTYSCYRIFAK--- 114
Query: 156 LEVRHFDLLPAKGWEV----DLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAET 211
+ AK EV DL E E V I NP NP G+V+ + +++I +T
Sbjct: 115 -------AVGAKFLEVPLTKDLRIPEVNVGEGDVVF-IPNPNNPTGHVFEREEIERILKT 166
Query: 212 AKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD 271
G V DE Y F +V + + + SK + + R+G++V S+
Sbjct: 167 ----GAFVALDEAY--YEFHGESYVDF--LKKYENLAVIRTFSKAFSLAAQRVGYVVASE 218
>pdb|4F5H|A Chain A, Intercoversion Of Substrate Specificity: E. Coli Aspatate
Aminotransferase To Tyrosine Aminotransferase: Chimera
P3.
pdb|4F5H|B Chain B, Intercoversion Of Substrate Specificity: E. Coli Aspatate
Aminotransferase To Tyrosine Aminotransferase: Chimera
P3
Length = 406
Score = 35.4 bits (80), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 5/121 (4%)
Query: 116 TLGCTQAIEVILTVLARPGA--NILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDL 173
T G + A+ V LA+ + + + P +P ++A + LEVR + A+ +D
Sbjct: 110 TPGGSGALRVAADFLAKNTSVKRVWVSNPSWPNHKAIFNSAGLEVREYAYYDAENHTLDF 169
Query: 174 DAVEALADENTVALVIINPG---NPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAF 230
DA+ +E V++ G NP G T + Q +A+ + + G + + D Y
Sbjct: 170 DALINSLNEAQAGDVVLFHGCCHNPTGADPTLEQWQTLAQLSVEKGWLPLIDFAYQGFGR 229
Query: 231 G 231
G
Sbjct: 230 G 230
>pdb|1ARI|A Chain A, Aspartate Aminotransferase, W140h Mutant, Maleate Complex
pdb|1ARI|B Chain B, Aspartate Aminotransferase, W140h Mutant, Maleate Complex
Length = 396
Score = 35.4 bits (80), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 54/121 (44%), Gaps = 5/121 (4%)
Query: 116 TLGCTQAIEVILTVLARPGA--NILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDL 173
T G T A+ V LA+ + + + P P +++ + LEVR + A+ +D
Sbjct: 100 TPGGTGALRVAADFLAKNTSVKRVWVSNPSHPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
Query: 174 DAVEALADENTVALVIINPG---NPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAF 230
DA+ +E V++ G NP G T + Q +A+ + + G + + D Y A
Sbjct: 160 DALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFAR 219
Query: 231 G 231
G
Sbjct: 220 G 220
>pdb|4F5G|A Chain A, Rational Design And Directed Evolution Of E. Coli Apartate
Aminotransferase To Tyrosine Aminotransferase: Mutant
P2.
pdb|4F5G|B Chain B, Rational Design And Directed Evolution Of E. Coli Apartate
Aminotransferase To Tyrosine Aminotransferase: Mutant P2
Length = 406
Score = 35.0 bits (79), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 5/121 (4%)
Query: 116 TLGCTQAIEVILTVLARPGA--NILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDL 173
T G + A+ V LA+ + + + P +P ++A + LEVR + A+ +D
Sbjct: 110 TPGGSGALRVAADFLAKNTSVKRVWVSNPSWPNHKAIFNSAGLEVREYAYYDAENHTLDF 169
Query: 174 DAVEALADENTVALVIINPG---NPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAF 230
DA+ +E V++ G NP G T + Q +A+ + + G + + D Y
Sbjct: 170 DALINSLNEAQAGDVVLFHGCCHNPTGADPTLEQWQTLAQLSVEKGWLPLIDIAYQGFGR 229
Query: 231 G 231
G
Sbjct: 230 G 230
>pdb|4F5J|A Chain A, Rational Design And Directed Evolution For Conversion Of
Substrate Specificity From E.coli Aspartate
Aminotransferase To Tyrosine Aminotransferase: Mutant
P5.
pdb|4F5J|B Chain B, Rational Design And Directed Evolution For Conversion Of
Substrate Specificity From E.coli Aspartate
Aminotransferase To Tyrosine Aminotransferase: Mutant P5
Length = 406
Score = 35.0 bits (79), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 5/121 (4%)
Query: 116 TLGCTQAIEVILTVLARPGA--NILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDL 173
T G + A+ V LA+ + + + P +P ++A + LEVR + A+ +D
Sbjct: 110 TPGGSGALRVAADFLAKNTSVKRVWVSNPSWPNHKAIFNSAGLEVREYAYYDAENHTLDF 169
Query: 174 DAVEALADENTVALVIINPG---NPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAF 230
DA+ +E V++ G NP G T + Q +A+ + + G + + D Y
Sbjct: 170 DALINSLNEAQAGDVVLFHGCCHNPTGADPTLEQWQTLAQLSVEKGWLPLIDIAYQGFGR 229
Query: 231 G 231
G
Sbjct: 230 G 230
>pdb|1TOE|A Chain A, Unliganded Structure Of Hexamutant + A293d Mutant Of E.
Coli Aspartate Aminotransferase
pdb|1TOI|A Chain A, Hydrocinnamic Acid-Bound Structure Of Hexamutant + A293d
Mutant Of E. Coli Aspartate Aminotransferase
Length = 396
Score = 35.0 bits (79), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 55/121 (45%), Gaps = 5/121 (4%)
Query: 116 TLGCTQAIEVILTVLARPGA--NILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDL 173
T G + A+ V LA+ + + + P +P +++ + LEVR + A+ +D
Sbjct: 100 TPGGSGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
Query: 174 DAVEALADENTVALVIINPG---NPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAF 230
DA+ +E V++ G NP G T + Q +A+ + + G + + D Y A
Sbjct: 160 DALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFAR 219
Query: 231 G 231
G
Sbjct: 220 G 220
>pdb|1TOG|A Chain A, Hydrocinnamic Acid-Bound Structure Of Srhept + A293d
Mutant Of E. Coli Aspartate Aminotransferase
pdb|1TOG|B Chain B, Hydrocinnamic Acid-Bound Structure Of Srhept + A293d
Mutant Of E. Coli Aspartate Aminotransferase
Length = 396
Score = 35.0 bits (79), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 55/121 (45%), Gaps = 5/121 (4%)
Query: 116 TLGCTQAIEVILTVLARPGA--NILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDL 173
T G + A+ V LA+ + + + P +P +++ + LEVR + A+ +D
Sbjct: 100 TPGGSGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
Query: 174 DAVEALADENTVALVIINPG---NPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAF 230
DA+ +E V++ G NP G T + Q +A+ + + G + + D Y A
Sbjct: 160 DALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFAR 219
Query: 231 G 231
G
Sbjct: 220 G 220
>pdb|1TOJ|A Chain A, Hydrocinnamic Acid-Bound Structure Of Srhept Mutant Of E.
Coli Aspartate Aminotransferase
pdb|1TOK|A Chain A, Maleic Acid-bound Structure Of Srhept Mutant Of E. Coli
Aspartate Aminotransferase
pdb|1TOK|B Chain B, Maleic Acid-bound Structure Of Srhept Mutant Of E. Coli
Aspartate Aminotransferase
Length = 396
Score = 35.0 bits (79), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 55/121 (45%), Gaps = 5/121 (4%)
Query: 116 TLGCTQAIEVILTVLARPGA--NILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDL 173
T G + A+ V LA+ + + + P +P +++ + LEVR + A+ +D
Sbjct: 100 TPGGSGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
Query: 174 DAVEALADENTVALVIINPG---NPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAF 230
DA+ +E V++ G NP G T + Q +A+ + + G + + D Y A
Sbjct: 160 DALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFAR 219
Query: 231 G 231
G
Sbjct: 220 G 220
>pdb|1AHY|A Chain A, Aspartate Aminotransferase Hexamutant
pdb|1AHY|B Chain B, Aspartate Aminotransferase Hexamutant
pdb|1AHX|A Chain A, Aspartate Aminotransferase Hexamutant
pdb|1AHX|B Chain B, Aspartate Aminotransferase Hexamutant
pdb|1AHG|A Chain A, Aspartate Aminotransferase Hexamutant
pdb|1AHG|B Chain B, Aspartate Aminotransferase Hexamutant
pdb|1AHF|A Chain A, Aspartate Aminotransferase Hexamutant
pdb|1AHF|B Chain B, Aspartate Aminotransferase Hexamutant
pdb|1AHE|A Chain A, Aspartate Aminotransferase Hexamutant
pdb|1AHE|B Chain B, Aspartate Aminotransferase Hexamutant
Length = 396
Score = 35.0 bits (79), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 55/121 (45%), Gaps = 5/121 (4%)
Query: 116 TLGCTQAIEVILTVLARPGA--NILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDL 173
T G + A+ V LA+ + + + P +P +++ + LEVR + A+ +D
Sbjct: 100 TPGGSGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
Query: 174 DAVEALADENTVALVIINPG---NPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAF 230
DA+ +E V++ G NP G T + Q +A+ + + G + + D Y A
Sbjct: 160 DALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFAR 219
Query: 231 G 231
G
Sbjct: 220 G 220
>pdb|1H1C|A Chain A, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
pdb|1H1C|B Chain B, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
pdb|1H1C|C Chain C, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
pdb|1H1C|D Chain D, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
Length = 335
Score = 35.0 bits (79), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 8/85 (9%)
Query: 187 LVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP 246
+ I NP NP G+V+ + +++I +T G V DE Y F +V
Sbjct: 142 VFIPNPNNPTGHVFEREEIERILKT----GAFVALDEAY--YEFHGESYVDF--LKKYEN 193
Query: 247 VLTLGSISKRWIVPGWRLGWLVTSD 271
+ + + SK + + R+G++V S+
Sbjct: 194 LAVIRTFSKAFSLAAQRVGYVVASE 218
>pdb|1ASF|A Chain A, The Structural Basis For The Reduced Activity Of The
Y226f(Y225f) Active Site Mutant Of E. Coli Aspartate
Aminotransferase
pdb|1ASG|A Chain A, The Structural Basis For The Reduced Activity Of The
Y226f(Y225f) Active Site Mutant Of E. Coli Aspartate
Aminotransferase
Length = 396
Score = 35.0 bits (79), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 55/121 (45%), Gaps = 5/121 (4%)
Query: 116 TLGCTQAIEVILTVLARPGA--NILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDL 173
T G T A+ V LA+ + + + P +P +++ + LEVR + A+ +D
Sbjct: 100 TPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
Query: 174 DAVEALADENTVALVIINPG---NPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAF 230
DA+ +E V++ G NP G T + Q +A+ + + G + + D + A
Sbjct: 160 DALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAFQGFAR 219
Query: 231 G 231
G
Sbjct: 220 G 220
>pdb|4F5K|A Chain A, Substrate Specificity Conversion Of Aspartate
Aminotransferase To Tyrosine Aminotransferase By The
Janus Algorithm: Chimera P6.
pdb|4F5K|B Chain B, Substrate Specificity Conversion Of Aspartate
Aminotransferase To Tyrosine Aminotransferase By The
Janus Algorithm: Chimera P6
Length = 406
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 5/121 (4%)
Query: 116 TLGCTQAIEVILTVLARPGA--NILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDL 173
T G + A+ V LA+ + + + P +P ++A + LEVR + A+ +D
Sbjct: 110 TPGGSGALRVAADFLAKNTSVKRVWVSNPTWPNHKAIFNSAGLEVREYAYYDAENHTLDF 169
Query: 174 DAVEALADENTVALVIINPG---NPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAF 230
DA+ +E V++ G NP G T + Q +A+ + + G + + D Y
Sbjct: 170 DALINSLNEAQAGDVVLFHGCCHNPTGADPTLEQWQTLAQLSVEKGWLPLIDIAYQGFGR 229
Query: 231 G 231
G
Sbjct: 230 G 230
>pdb|2ZY5|A Chain A, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|B Chain B, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|C Chain C, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|D Chain D, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|E Chain E, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|F Chain F, R487a Mutant Of L-Aspartate Beta-Decarboxylase
Length = 546
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 66/173 (38%), Gaps = 17/173 (9%)
Query: 112 DVYLTLGCTQAIEVI-----LTVLARPGANILLPRPGF-PYYEA-RATHSHLEVRHFDLL 164
+++ G T A+ I L L + G + + P F PY E LE +
Sbjct: 167 NLFAVEGGTAAMAYIFESLKLNGLLKAGDKVAIGMPVFTPYIEIPELAQYALEEVAINAD 226
Query: 165 PAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAE--TAKKLGIMVIAD 222
P+ W+ ++ L D +NP NP + L+++ + +M++ D
Sbjct: 227 PSLNWQYPDSELDKLKDPAIKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTD 286
Query: 223 EVYDHLAFGNTPFVPMGVFGSIVP--VLTLGSISKRWIVPGWRLGWLVTSDPN 273
+VY A +I P L + S SK + GWRLG + N
Sbjct: 287 DVYGTFADDFQSLF------AICPENTLLVYSFSKYFGATGWRLGVVAAHQQN 333
>pdb|2ZY3|A Chain A, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|B Chain B, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|C Chain C, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|D Chain D, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|E Chain E, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|F Chain F, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|A Chain A, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|B Chain B, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|C Chain C, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|D Chain D, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|E Chain E, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|F Chain F, Dodecameric L-Aspartate Beta-Decarboxylase
Length = 546
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 66/173 (38%), Gaps = 17/173 (9%)
Query: 112 DVYLTLGCTQAIEVI-----LTVLARPGANILLPRPGF-PYYEA-RATHSHLEVRHFDLL 164
+++ G T A+ I L L + G + + P F PY E LE +
Sbjct: 167 NLFAVEGGTAAMAYIFESLKLNGLLKAGDKVAIGMPVFTPYIEIPELAQYALEEVAINAD 226
Query: 165 PAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAE--TAKKLGIMVIAD 222
P+ W+ ++ L D +NP NP + L+++ + +M++ D
Sbjct: 227 PSLNWQYPDSELDKLKDPAIKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTD 286
Query: 223 EVYDHLAFGNTPFVPMGVFGSIVP--VLTLGSISKRWIVPGWRLGWLVTSDPN 273
+VY A +I P L + S SK + GWRLG + N
Sbjct: 287 DVYGTFADDFQSLF------AICPENTLLVYSFSKYFGATGWRLGVVAAHQQN 333
>pdb|3VK2|A Chain A, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant.
pdb|3VK2|B Chain B, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant.
pdb|3VK2|C Chain C, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant.
pdb|3VK2|D Chain D, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant.
pdb|3VK3|A Chain A, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant Complexed With
L-Methionine
pdb|3VK3|B Chain B, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant Complexed With
L-Methionine
pdb|3VK3|C Chain C, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant Complexed With
L-Methionine
pdb|3VK3|D Chain D, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant Complexed With
L-Methionine
pdb|3VK4|A Chain A, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant Complexed With
L-Homocysteine
pdb|3VK4|B Chain B, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant Complexed With
L-Homocysteine
pdb|3VK4|C Chain C, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant Complexed With
L-Homocysteine
pdb|3VK4|D Chain D, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant Complexed With
L-Homocysteine
Length = 398
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 48/108 (44%), Gaps = 14/108 (12%)
Query: 122 AIEVILTVLARPGANILLPRPGFPYYEARATHS----HLEVRHFDLLPAKGWEVDLDAVE 177
AI L L RPG +LL + + A H +++RH D+ DL A+E
Sbjct: 92 AITSTLWTLLRPGDEVLLGNTLYGHTFAFLHHGIGEFGVKLRHVDM-------ADLQALE 144
Query: 178 ALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVY 225
A T + +P NP N++ + +A+ A+K G V+ D Y
Sbjct: 145 AAMTPATRVIYFESPANP--NMHMAD-IAGVAKIARKHGATVVVDNTY 189
>pdb|4F5F|A Chain A, Structure Of Aspartate Aminotransferase Conversion To
Tyrosine Aminotransferase: Chimera P1.
pdb|4F5F|B Chain B, Structure Of Aspartate Aminotransferase Conversion To
Tyrosine Aminotransferase: Chimera P1
Length = 406
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 5/121 (4%)
Query: 116 TLGCTQAIEVILTVLARPGA--NILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDL 173
T G + A+ V LA+ + + + P +P ++A + LEVR + A+ +D
Sbjct: 110 TPGGSGALRVGADFLAKNTSVKRVWVSNPSWPNHKAIFNSAGLEVREYAYYDAENHTLDF 169
Query: 174 DAVEALADENTVALVIINPG---NPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAF 230
DA+ +E V++ G NP G T + Q +A+ + + G + + D Y
Sbjct: 170 DALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLIDFAYQGFGR 229
Query: 231 G 231
G
Sbjct: 230 G 230
>pdb|2NXW|A Chain A, Crystal Structure Of Phenylpyruvate Decarboxylase Of
Azospirillum Brasilense
pdb|2NXW|B Chain B, Crystal Structure Of Phenylpyruvate Decarboxylase Of
Azospirillum Brasilense
pdb|2Q5J|A Chain A, X-Ray Structure Of Phenylpyruvate Decarboxylase In Complex
With 3- Deaza-Thdp
pdb|2Q5J|B Chain B, X-Ray Structure Of Phenylpyruvate Decarboxylase In Complex
With 3- Deaza-Thdp
pdb|2Q5L|A Chain A, X-Ray Structure Of Phenylpyruvate Decarboxylase In Complex
With 2-(1- Hydroxyethyl)-3-Deaza-Thdp
pdb|2Q5L|B Chain B, X-Ray Structure Of Phenylpyruvate Decarboxylase In Complex
With 2-(1- Hydroxyethyl)-3-Deaza-Thdp
pdb|2Q5O|A Chain A, X-Ray Structure Of Phenylpyruvate Decarboxylase In Complex
With 3- Deaza-Thdp And Phenylpyruvate
pdb|2Q5O|B Chain B, X-Ray Structure Of Phenylpyruvate Decarboxylase In Complex
With 3- Deaza-Thdp And Phenylpyruvate
pdb|2Q5Q|A Chain A, X-Ray Structure Of Phenylpyruvate Decarboxylase In Complex
With 3- Deaza-Thdp And 5-Phenyl-2-Oxo-Valeric Acid
pdb|2Q5Q|B Chain B, X-Ray Structure Of Phenylpyruvate Decarboxylase In Complex
With 3- Deaza-Thdp And 5-Phenyl-2-Oxo-Valeric Acid
Length = 565
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 169 WEVDLDAVEALADENTVALVIINPGNP----CGNVYTYQHLQKIAETAKKLGIMVIADEV 224
W VD DA+ A ADE A+ + +P C V Y K+AE A++LG+ V+ +
Sbjct: 201 WPVDRDALAACADEVLAAMR--SATSPVLMVCVEVRRYGLEAKVAELAQRLGVPVVTTFM 258
Query: 225 YDHLAFGNTPFVPMGVF 241
L + P P+G +
Sbjct: 259 GRGL-LADAPTPPLGTY 274
>pdb|4F5I|A Chain A, Substrate Specificity Conversion Of E. Coli
Pyridoxal-5'-phosphate Dependent Aspartate
Aminotransferase To Tyrosine Aminotransferase: Chimera
P4.
pdb|4F5I|B Chain B, Substrate Specificity Conversion Of E. Coli
Pyridoxal-5'-phosphate Dependent Aspartate
Aminotransferase To Tyrosine Aminotransferase: Chimera
P4
Length = 406
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 5/121 (4%)
Query: 116 TLGCTQAIEVILTVLARPGA--NILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDL 173
T G + A+ V LA+ + + + P +P ++A + LEVR + A+ +D
Sbjct: 110 TPGGSGALRVAADFLAKNTSVKRVWVSNPTWPNHKAIFNSAGLEVREYAYYDAENHTLDF 169
Query: 174 DAVEALADENTVALVIINPG---NPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAF 230
DA+ +E V++ G NP G T + Q +A+ + + G + + D Y
Sbjct: 170 DALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLIDIAYQGFGR 229
Query: 231 G 231
G
Sbjct: 230 G 230
>pdb|1IX8|A Chain A, Aspartate Aminotransferase Active Site Mutant V39fN194A
Length = 396
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 5/121 (4%)
Query: 116 TLGCTQAIEVILTVLARPGA--NILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDL 173
T G T A+ V LA+ + + + P +P +++ + LEVR + A+ +D
Sbjct: 100 TPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
Query: 174 DAVEALADENTVALVIINPG---NPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAF 230
DA+ +E V++ G P G T + Q +A+ + + G + + D Y A
Sbjct: 160 DALINSLNEAQAGDVVLFHGCCHAPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFAR 219
Query: 231 G 231
G
Sbjct: 220 G 220
>pdb|1BQA|A Chain A, Aspartate Aminotransferase P195a Mutant
pdb|1BQA|B Chain B, Aspartate Aminotransferase P195a Mutant
Length = 396
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 5/121 (4%)
Query: 116 TLGCTQAIEVILTVLARPGA--NILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDL 173
T G T A+ V LA+ + + + P +P +++ + LEVR + A+ +D
Sbjct: 100 TPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
Query: 174 DAVEALADENTVALVIINPG---NPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAF 230
DA+ +E V++ G N G T + Q +A+ + + G + + D Y A
Sbjct: 160 DALINSLNEAQAGDVVLFHGCCHNATGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFAR 219
Query: 231 G 231
G
Sbjct: 220 G 220
>pdb|1G7X|A Chain A, Aspartate Aminotransferase Active Site Mutant
N194aR292LR386L
Length = 396
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 5/121 (4%)
Query: 116 TLGCTQAIEVILTVLARPGA--NILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDL 173
T G T A+ V LA+ + + + P +P +++ + LEVR + A+ +D
Sbjct: 100 TPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
Query: 174 DAVEALADENTVALVIINPG---NPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAF 230
DA+ +E V++ G P G T + Q +A+ + + G + + D Y A
Sbjct: 160 DALINSLNEAQAGDVVLFHGCCHAPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFAR 219
Query: 231 G 231
G
Sbjct: 220 G 220
>pdb|1ASB|A Chain A, The Structural Basis For The Reduced Activity Of The
D223a(D222a) Active Site Mutant Of E. Coli Aspartate
Aminotransferase
pdb|1ASC|A Chain A, The Structural Basis For The Reduced Activity Of The
D223a(D222a) Active Site Mutant Of E. Coli Aspartate
Aminotransferase
pdb|1SPA|A Chain A, Role Of Asp222 In The Catalytic Mechanism Of Escherichia
Coli Aspartate Aminotransferase: The Amino Acid Residue
Which Enhances The Function Of The Enzyme-Bound Coenzyme
Pyridoxal 5'-Phosphate
Length = 396
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 5/121 (4%)
Query: 116 TLGCTQAIEVILTVLARPGA--NILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDL 173
T G T A+ V LA+ + + + P +P +++ + LEVR + A+ +D
Sbjct: 100 TPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
Query: 174 DAVEALADENTVALVIINPG---NPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAF 230
DA+ +E V++ G NP G T + Q +A+ + + G + + Y A
Sbjct: 160 DALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFAFAYQGFAR 219
Query: 231 G 231
G
Sbjct: 220 G 220
>pdb|1G7W|A Chain A, Aspartate Aminotransferase Active Site Mutant N194aR386L
Length = 396
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 5/121 (4%)
Query: 116 TLGCTQAIEVILTVLARPGA--NILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDL 173
T G T A+ V LA+ + + + P +P +++ + LEVR + A+ +D
Sbjct: 100 TPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
Query: 174 DAVEALADENTVALVIINPG---NPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAF 230
DA+ +E V++ G P G T + Q +A+ + + G + + D Y A
Sbjct: 160 DALINSLNEAQAGDVVLFHGCCHAPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFAR 219
Query: 231 G 231
G
Sbjct: 220 G 220
>pdb|1G4X|A Chain A, Aspartate Aminotransferase Active Site Mutant N194aR292L
Length = 396
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 5/121 (4%)
Query: 116 TLGCTQAIEVILTVLARPGA--NILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDL 173
T G T A+ V LA+ + + + P +P +++ + LEVR + A+ +D
Sbjct: 100 TPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
Query: 174 DAVEALADENTVALVIINPG---NPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAF 230
DA+ +E V++ G P G T + Q +A+ + + G + + D Y A
Sbjct: 160 DALINSLNEAQAGDVVLFHGCCHAPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFAR 219
Query: 231 G 231
G
Sbjct: 220 G 220
>pdb|3ZZJ|A Chain A, Structure Of An Engineered Aspartate Aminotransferase
pdb|3ZZK|A Chain A, Structure Of An Engineered Aspartate Aminotransferase
pdb|4A00|A Chain A, Structure Of An Engineered Aspartate Aminotransferase
Length = 396
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 5/121 (4%)
Query: 116 TLGCTQAIEVILTVLARPGA--NILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDL 173
T G T A+ V LA+ + + + P +P +++ + LEVR + A+ +D
Sbjct: 100 TPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
Query: 174 DAVEALADENTVALVIINPG---NPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAF 230
DA+ +E V++ G NP G T + Q +A+ + + G + + D A
Sbjct: 160 DALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAQQGFAR 219
Query: 231 G 231
G
Sbjct: 220 G 220
>pdb|1ARH|A Chain A, Aspartate Aminotransferase, Y225rR386A MUTANT
pdb|1ARH|B Chain B, Aspartate Aminotransferase, Y225rR386A MUTANT
Length = 396
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 5/121 (4%)
Query: 116 TLGCTQAIEVILTVLARPGA--NILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDL 173
T G T A+ V LA+ + + + P +P +++ + LEVR + A+ +D
Sbjct: 100 TPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
Query: 174 DAVEALADENTVALVIINPG---NPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAF 230
DA+ +E V++ G NP G T + Q +A+ + + G + + D A
Sbjct: 160 DALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFARQGFAR 219
Query: 231 G 231
G
Sbjct: 220 G 220
>pdb|1GC0|A Chain A, Crystal Structure Of The Pyridoxal-5'-Phosphate Dependent
L- Methionine Gamma-Lyase From Pseudomonas Putida
pdb|1GC0|B Chain B, Crystal Structure Of The Pyridoxal-5'-Phosphate Dependent
L- Methionine Gamma-Lyase From Pseudomonas Putida
pdb|1GC0|C Chain C, Crystal Structure Of The Pyridoxal-5'-Phosphate Dependent
L- Methionine Gamma-Lyase From Pseudomonas Putida
pdb|1GC0|D Chain D, Crystal Structure Of The Pyridoxal-5'-Phosphate Dependent
L- Methionine Gamma-Lyase From Pseudomonas Putida
pdb|1GC2|A Chain A, Crystal Structure Of The Pyridoxal-5'-Phosphate Dependent
L- Methionine Gamma-Lyase From Pseudomonas Putida
pdb|1GC2|B Chain B, Crystal Structure Of The Pyridoxal-5'-Phosphate Dependent
L- Methionine Gamma-Lyase From Pseudomonas Putida
pdb|1GC2|C Chain C, Crystal Structure Of The Pyridoxal-5'-Phosphate Dependent
L- Methionine Gamma-Lyase From Pseudomonas Putida
pdb|1GC2|D Chain D, Crystal Structure Of The Pyridoxal-5'-Phosphate Dependent
L- Methionine Gamma-Lyase From Pseudomonas Putida
pdb|1UKJ|A Chain A, Detailed Structure Of L-Methionine-Lyase From Pseudomonas
Putida
pdb|1UKJ|B Chain B, Detailed Structure Of L-Methionine-Lyase From Pseudomonas
Putida
pdb|1UKJ|C Chain C, Detailed Structure Of L-Methionine-Lyase From Pseudomonas
Putida
pdb|1UKJ|D Chain D, Detailed Structure Of L-Methionine-Lyase From Pseudomonas
Putida
pdb|2O7C|A Chain A, Crystal Structure Of L-Methionine-Lyase From Pseudomonas
pdb|2O7C|B Chain B, Crystal Structure Of L-Methionine-Lyase From Pseudomonas
pdb|2O7C|C Chain C, Crystal Structure Of L-Methionine-Lyase From Pseudomonas
pdb|2O7C|D Chain D, Crystal Structure Of L-Methionine-Lyase From Pseudomonas
Length = 398
Score = 32.7 bits (73), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 46/108 (42%), Gaps = 14/108 (12%)
Query: 122 AIEVILTVLARPGANILLPRP----GFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVE 177
AI L L RPG +LL F + +++RH D+ DL A+E
Sbjct: 92 AITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVDM-------ADLQALE 144
Query: 178 ALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVY 225
A T + +P NP N++ + +A+ A+K G V+ D Y
Sbjct: 145 AAMTPATRVIYFESPANP--NMHMAD-IAGVAKIARKHGATVVVDNTY 189
>pdb|1PG8|A Chain A, Crystal Structure Of L-Methionine Alpha-, Gamma-Lyase
pdb|1PG8|B Chain B, Crystal Structure Of L-Methionine Alpha-, Gamma-Lyase
pdb|1PG8|C Chain C, Crystal Structure Of L-Methionine Alpha-, Gamma-Lyase
pdb|1PG8|D Chain D, Crystal Structure Of L-Methionine Alpha-, Gamma-Lyase
Length = 398
Score = 32.7 bits (73), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 46/108 (42%), Gaps = 14/108 (12%)
Query: 122 AIEVILTVLARPGANILLPRP----GFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVE 177
AI L L RPG +LL F + +++RH D+ DL A+E
Sbjct: 92 AITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVDM-------ADLQALE 144
Query: 178 ALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVY 225
A T + +P NP N++ + +A+ A+K G V+ D Y
Sbjct: 145 AAMTPATRVIYFESPANP--NMHMAD-IAGVAKIARKHGATVVVDNTY 189
>pdb|3QGU|A Chain A, L,L-Diaminopimelate Aminotransferase From Chalmydomonas
Reinhardtii
pdb|3QGU|B Chain B, L,L-Diaminopimelate Aminotransferase From Chalmydomonas
Reinhardtii
Length = 449
Score = 32.7 bits (73), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 5/90 (5%)
Query: 182 ENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF 241
+ T + +P NP G T L ++ A+K G +++ D Y + + P P ++
Sbjct: 208 KRTDIIFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAY--ALYISNPDCPKTIY 265
Query: 242 ---GSIVPVLTLGSISKRWIVPGWRLGWLV 268
G+ + S SK G RLGW V
Sbjct: 266 EIPGADEVAIETCSFSKYAGFTGVRLGWTV 295
>pdb|1G4V|A Chain A, Aspartate Aminotransferase Active Site Mutant N194a/y225f
Length = 396
Score = 32.0 bits (71), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 54/121 (44%), Gaps = 5/121 (4%)
Query: 116 TLGCTQAIEVILTVLARPGA--NILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDL 173
T G T A+ V LA+ + + + P +P +++ + LEVR + A+ +D
Sbjct: 100 TPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
Query: 174 DAVEALADENTVALVIINPG---NPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAF 230
DA+ +E V++ G P G T + Q +A+ + + G + + D + A
Sbjct: 160 DALINSLNEAQAGDVVLFHGCCHAPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAFQGFAR 219
Query: 231 G 231
G
Sbjct: 220 G 220
>pdb|3EPN|A Chain A, Crystal Structure Of Caulobacter Crescentus Thic Complexed
With Imidazole Ribonucleotide
pdb|3EPN|B Chain B, Crystal Structure Of Caulobacter Crescentus Thic Complexed
With Imidazole Ribonucleotide
pdb|3EPO|A Chain A, Crystal Structure Of Caulobacter Crescentus Thic Complexed
With Hmp-P
pdb|3EPO|B Chain B, Crystal Structure Of Caulobacter Crescentus Thic Complexed
With Hmp-P
Length = 612
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 40/109 (36%), Gaps = 12/109 (11%)
Query: 163 LLPAKGWEVD--LDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVI 220
L+ A W D +D N +I N P G V YQ L+K+ A+ L V
Sbjct: 236 LVWATRWGADTVMDLSTGRNIHNIRDWIIRNSSVPIGTVPIYQALEKVNGVAEDLNWEVF 295
Query: 221 ADEVYDHLAFG----------NTPFVPMGVFGSIVPVLTLGSISKRWIV 259
D + + G PF+PM V GSI +W +
Sbjct: 296 RDTLIEQCEQGVDYFTIHAGVRLPFIPMTAKRVTGIVSRGGSIMAKWCL 344
>pdb|2EH6|A Chain A, Crystal Structure Of Acetylornithine Aminotransferase From
Aquifex Aeolicus Vf5
pdb|2EH6|B Chain B, Crystal Structure Of Acetylornithine Aminotransferase From
Aquifex Aeolicus Vf5
Length = 375
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 172 DLDAVEALADENTVALVI-INPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEV 224
D+D+V L DE T ++I + G N + L K+ E K+ +++I DEV
Sbjct: 161 DIDSVYKLLDEETAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEV 214
>pdb|1QKN|A Chain A, Rat Oestrogen Receptor Beta Ligand-Binding Domain In
Complex With Antagonist Raloxifene
pdb|1HJ1|A Chain A, Rat Oestrogen Receptor Beta Ligand-Binding Domain In
Complex With Pure Antioestrogen Ici164,384
Length = 255
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 25/46 (54%)
Query: 124 EVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGW 169
+++LT+L N+L+ RP P+ EA S ++ +L+ GW
Sbjct: 13 QLVLTLLEAEPPNVLVSRPSMPFTEASMMMSLTKLADKELVHMIGW 58
>pdb|2J7X|A Chain A, Structure Of Estradiol-bound Estrogen Receptor Beta Lbd In
Complex With Lxxll Motif From Ncoa5
pdb|2J7Y|A Chain A, Structure Of 17-Epiestriol-Bound Estrogen Receptor Beta
Lbd In Complex With Lxxll Motif From Ncoa5
Length = 255
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 25/46 (54%)
Query: 124 EVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGW 169
+++LT+L N+L+ RP P+ EA S ++ +L+ GW
Sbjct: 13 QLVLTLLEAEPPNVLVSRPSMPFTEASMMMSLTKLADKELVHMIGW 58
>pdb|3GTD|A Chain A, 2.4 Angstrom Crystal Structure Of Fumarate Hydratase From
Rickettsia Prowazekii
pdb|3GTD|B Chain B, 2.4 Angstrom Crystal Structure Of Fumarate Hydratase From
Rickettsia Prowazekii
Length = 482
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 55/122 (45%), Gaps = 13/122 (10%)
Query: 104 LPYKLSPDDV-YLTLGCTQAI--EVILTVLARPGA---NILLPRPGFPYYEARATHSHLE 157
+P K++P V LT+ CTQ + V +T+ G N+ P + ++ S
Sbjct: 342 MPGKVNPTQVEALTMVCTQVMGNHVTVTIAGSNGHLELNVFKPVIIYNILQSIELLSD-S 400
Query: 158 VRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGI 217
V F KG E ++ + L D++ + + ++NP Y + KIA+ A K GI
Sbjct: 401 VNSFVTHCVKGLEPNIARINTLRDKSLMLVTVLNPH------IGYDNAAKIAKEAHKYGI 454
Query: 218 MV 219
+
Sbjct: 455 TL 456
>pdb|2CTZ|A Chain A, Crystal Structure Of O-Acetyl Homoserine Sulfhydrylase
From Thermus Thermophilus Hb8
pdb|2CTZ|B Chain B, Crystal Structure Of O-Acetyl Homoserine Sulfhydrylase
From Thermus Thermophilus Hb8
Length = 421
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 178 ALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVY 225
AL DE T A + + GNP N+ L+ +A+ A++ G+ +I D +
Sbjct: 139 ALTDEKTRAWWVESIGNPALNI---PDLEALAQAAREKGVALIVDNTF 183
>pdb|1MWO|A Chain A, Crystal Structure Analysis Of The Hyperthermostable
Pyrocoocus Woesei Alpha-Amylase
pdb|1MXD|A Chain A, Structure Of A (Ca,Zn)-Dependent Alpha-Amylase From The
Hyperthermophilic Archaeon Pyrococcus Woesei
pdb|1MXG|A Chain A, Crystal Strucutre Of A (Ca,Zn)-Dependent Alpha-Amylase
From The Hyperthermophilic Archaeon Pyrococcus Woesei In
Complex With Acarbose
Length = 435
Score = 28.5 bits (62), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPM 238
+ L ++ +TA GI VIAD V +H A G+ + P
Sbjct: 87 EELVRLIQTAHAYGIKVIADVVINHRAGGDLEWNPF 122
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.138 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,222,421
Number of Sequences: 62578
Number of extensions: 561199
Number of successful extensions: 1580
Number of sequences better than 100.0: 147
Number of HSP's better than 100.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 74
Number of HSP's that attempted gapping in prelim test: 1405
Number of HSP's gapped (non-prelim): 156
length of query: 422
length of database: 14,973,337
effective HSP length: 101
effective length of query: 321
effective length of database: 8,652,959
effective search space: 2777599839
effective search space used: 2777599839
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)