Query 014603
Match_columns 422
No_of_seqs 186 out of 2322
Neff 10.4
Searched_HMMs 46136
Date Fri Mar 29 06:44:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014603.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014603hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0259 Tyrosine aminotransfer 100.0 2.2E-62 4.8E-67 425.3 42.9 409 12-420 28-436 (447)
2 PLN00145 tyrosine/nicotianamin 100.0 3.7E-61 8E-66 459.5 48.0 422 1-422 1-429 (430)
3 PLN02187 rooty/superroot1 100.0 7.8E-59 1.7E-63 446.1 46.3 409 10-421 31-442 (462)
4 COG0436 Aspartate/tyrosine/aro 100.0 1E-58 2.3E-63 433.6 43.3 379 23-418 6-392 (393)
5 PLN02656 tyrosine transaminase 100.0 1.5E-56 3.3E-61 426.9 46.4 395 28-422 13-408 (409)
6 PLN00143 tyrosine/nicotianamin 100.0 1.2E-55 2.5E-60 420.4 45.5 394 28-421 15-408 (409)
7 PTZ00433 tyrosine aminotransfe 100.0 3.4E-53 7.4E-58 404.5 45.7 402 12-420 4-411 (412)
8 TIGR01264 tyr_amTase_E tyrosin 100.0 6.6E-53 1.4E-57 401.9 44.7 400 12-418 1-400 (401)
9 TIGR01265 tyr_nico_aTase tyros 100.0 1.3E-52 2.8E-57 399.7 45.8 402 12-418 1-402 (403)
10 PRK13355 bifunctional HTH-doma 100.0 7.1E-53 1.5E-57 412.1 44.2 398 12-419 115-516 (517)
11 PLN00175 aminotransferase fami 100.0 6.5E-52 1.4E-56 394.5 44.7 376 13-416 29-412 (413)
12 PRK06855 aminotransferase; Val 100.0 3.7E-51 8.1E-56 391.7 43.3 387 28-419 17-431 (433)
13 PRK06207 aspartate aminotransf 100.0 4E-51 8.7E-56 388.8 43.1 359 44-419 38-404 (405)
14 PRK07681 aspartate aminotransf 100.0 5.5E-51 1.2E-55 388.2 44.0 376 16-414 5-385 (399)
15 PRK07366 succinyldiaminopimela 100.0 3.5E-51 7.5E-56 388.6 42.2 379 17-415 4-388 (388)
16 PRK08960 hypothetical protein; 100.0 7.4E-51 1.6E-55 386.0 44.1 379 15-416 4-386 (387)
17 TIGR03540 DapC_direct LL-diami 100.0 2E-50 4.4E-55 382.9 43.6 375 17-413 3-382 (383)
18 PRK06107 aspartate aminotransf 100.0 2.7E-50 5.8E-55 383.6 44.3 388 14-418 4-401 (402)
19 PRK06348 aspartate aminotransf 100.0 1.9E-50 4.2E-55 382.5 42.9 372 17-414 7-382 (384)
20 PRK08068 transaminase; Reviewe 100.0 2.8E-50 6.1E-55 382.3 43.6 378 15-414 4-386 (389)
21 PRK09276 LL-diaminopimelate am 100.0 4.7E-50 1E-54 380.7 43.8 376 16-413 4-384 (385)
22 PRK09147 succinyldiaminopimela 100.0 3.5E-50 7.5E-55 382.6 42.8 372 18-416 3-395 (396)
23 PRK08636 aspartate aminotransf 100.0 9.1E-50 2E-54 380.1 44.8 383 17-418 7-401 (403)
24 PRK07337 aminotransferase; Val 100.0 7.2E-50 1.6E-54 379.6 43.9 381 16-415 3-387 (388)
25 PTZ00377 alanine aminotransfer 100.0 4.3E-50 9.3E-55 389.5 41.7 401 15-421 9-479 (481)
26 PRK05764 aspartate aminotransf 100.0 2.4E-49 5.2E-54 377.2 44.3 388 14-418 2-392 (393)
27 PRK09265 aminotransferase AlaT 100.0 3.1E-49 6.6E-54 376.8 44.9 394 17-419 7-403 (404)
28 PRK05942 aspartate aminotransf 100.0 2E-49 4.3E-54 376.9 43.1 378 16-415 8-390 (394)
29 PRK09148 aminotransferase; Val 100.0 3.1E-49 6.8E-54 376.1 44.5 382 18-418 5-391 (405)
30 PRK08361 aspartate aminotransf 100.0 1.6E-49 3.6E-54 377.3 41.2 380 13-417 7-390 (391)
31 PRK07682 hypothetical protein; 100.0 1.7E-49 3.7E-54 375.9 41.1 353 45-418 20-377 (378)
32 PRK05957 aspartate aminotransf 100.0 7.1E-49 1.5E-53 372.2 44.9 381 15-421 3-389 (389)
33 PRK07568 aspartate aminotransf 100.0 8.1E-49 1.7E-53 374.1 44.5 384 15-422 2-397 (397)
34 PRK08363 alanine aminotransfer 100.0 7.2E-49 1.6E-53 373.8 43.0 385 17-418 5-395 (398)
35 KOG0257 Kynurenine aminotransf 100.0 3E-50 6.6E-55 356.2 30.9 349 50-412 36-414 (420)
36 PRK06108 aspartate aminotransf 100.0 9.6E-49 2.1E-53 372.0 43.4 373 18-416 3-381 (382)
37 PRK08912 hypothetical protein; 100.0 1.9E-48 4E-53 369.8 42.9 375 17-417 5-386 (387)
38 TIGR03538 DapC_gpp succinyldia 100.0 1.7E-48 3.6E-53 370.7 41.7 369 19-414 3-392 (393)
39 PRK06290 aspartate aminotransf 100.0 2.5E-48 5.5E-53 368.9 42.8 357 42-418 41-406 (410)
40 PRK07550 hypothetical protein; 100.0 2.9E-48 6.4E-53 368.3 43.2 378 16-414 2-384 (386)
41 PRK07683 aminotransferase A; V 100.0 5.2E-48 1.1E-52 366.0 44.6 375 17-419 6-385 (387)
42 PRK07324 transaminase; Validat 100.0 6.9E-49 1.5E-53 369.7 37.6 347 43-418 24-371 (373)
43 PRK12414 putative aminotransfe 100.0 2.7E-48 5.9E-53 367.6 41.0 349 44-413 28-383 (384)
44 COG1168 MalY Bifunctional PLP- 100.0 3.1E-48 6.7E-53 340.1 37.8 355 44-418 24-387 (388)
45 PRK07309 aromatic amino acid a 100.0 9.1E-48 2E-52 364.9 43.7 378 15-419 6-390 (391)
46 PLN02607 1-aminocyclopropane-1 100.0 2E-48 4.3E-53 371.7 38.9 364 42-420 44-440 (447)
47 PLN02231 alanine transaminase 100.0 4.4E-48 9.6E-53 375.1 41.8 384 19-421 110-531 (534)
48 PRK07590 L,L-diaminopimelate a 100.0 3.8E-48 8.1E-53 369.7 40.7 359 30-414 19-408 (409)
49 PRK09082 methionine aminotrans 100.0 4.9E-48 1.1E-52 366.4 39.9 370 17-413 9-385 (386)
50 PRK07777 aminotransferase; Val 100.0 3.1E-47 6.6E-52 361.5 43.1 371 19-415 5-384 (387)
51 PLN02450 1-aminocyclopropane-1 100.0 8.4E-48 1.8E-52 370.4 37.4 363 42-419 35-432 (468)
52 PRK05839 hypothetical protein; 100.0 4.1E-47 9E-52 358.0 40.8 339 43-416 22-373 (374)
53 PLN02376 1-aminocyclopropane-1 100.0 3.2E-47 6.9E-52 367.3 39.7 362 43-419 44-440 (496)
54 TIGR03537 DapC succinyldiamino 100.0 7E-47 1.5E-51 354.0 39.3 341 47-413 2-349 (350)
55 PRK08175 aminotransferase; Val 100.0 3.9E-46 8.4E-51 354.5 42.4 356 43-418 27-390 (395)
56 COG1167 ARO8 Transcriptional r 100.0 2.9E-46 6.2E-51 357.7 39.5 354 45-419 89-457 (459)
57 PRK06836 aspartate aminotransf 100.0 2.7E-45 5.9E-50 348.3 42.4 368 28-419 16-393 (394)
58 TIGR03542 DAPAT_plant LL-diami 100.0 1.8E-45 4E-50 350.4 40.2 344 43-414 31-401 (402)
59 PRK09257 aromatic amino acid a 100.0 4.1E-46 8.8E-51 354.4 34.5 371 19-415 4-396 (396)
60 PRK09275 aspartate aminotransf 100.0 1.6E-45 3.4E-50 352.0 37.8 375 27-420 75-520 (527)
61 PRK15481 transcriptional regul 100.0 1.5E-45 3.2E-50 354.3 37.1 338 45-416 85-430 (431)
62 PTZ00376 aspartate aminotransf 100.0 1.5E-45 3.2E-50 351.0 34.7 369 19-417 7-403 (404)
63 PRK07865 N-succinyldiaminopime 100.0 7.8E-45 1.7E-49 342.1 39.2 354 15-412 2-363 (364)
64 PRK06225 aspartate aminotransf 100.0 2.9E-44 6.4E-49 340.2 41.7 350 43-420 26-379 (380)
65 PF00155 Aminotran_1_2: Aminot 100.0 4.9E-46 1.1E-50 351.2 29.1 349 46-411 2-363 (363)
66 PLN02672 methionine S-methyltr 100.0 1.7E-44 3.6E-49 364.5 40.0 379 18-416 671-1079(1082)
67 PLN02368 alanine transaminase 100.0 5.4E-45 1.2E-49 343.6 31.2 335 15-357 10-397 (407)
68 PRK01533 histidinol-phosphate 100.0 8.7E-45 1.9E-49 340.2 32.5 332 43-420 27-358 (366)
69 PRK14809 histidinol-phosphate 100.0 2.8E-44 6E-49 337.5 35.3 329 43-416 28-356 (357)
70 PRK03158 histidinol-phosphate 100.0 1.3E-44 2.9E-49 340.3 33.1 331 44-414 28-358 (359)
71 TIGR03539 DapC_actino succinyl 100.0 1.5E-43 3.2E-48 332.2 39.7 345 26-411 4-356 (357)
72 TIGR03801 asp_4_decarbox aspar 100.0 1.2E-43 2.7E-48 338.5 38.5 377 27-420 69-519 (521)
73 PRK06358 threonine-phosphate d 100.0 1E-43 2.2E-48 332.4 36.5 334 44-415 18-353 (354)
74 PRK02610 histidinol-phosphate 100.0 1.4E-43 3.1E-48 334.2 36.2 336 46-418 29-372 (374)
75 PRK09440 avtA valine--pyruvate 100.0 4.4E-43 9.6E-48 336.2 38.5 355 44-420 29-414 (416)
76 PLN02397 aspartate transaminas 100.0 4.3E-43 9.4E-48 334.7 37.4 366 19-416 26-420 (423)
77 PRK08056 threonine-phosphate d 100.0 9.1E-43 2E-47 326.7 35.5 333 44-415 19-353 (356)
78 PRK05166 histidinol-phosphate 100.0 1E-42 2.2E-47 328.2 34.4 332 43-411 34-368 (371)
79 COG0079 HisC Histidinol-phosph 100.0 2.1E-42 4.6E-47 317.9 34.7 333 44-417 21-354 (356)
80 PRK07392 threonine-phosphate d 100.0 2.1E-42 4.6E-47 324.9 35.5 329 44-411 21-356 (360)
81 PLN03026 histidinol-phosphate 100.0 2.7E-42 5.9E-47 325.5 35.2 327 44-413 51-378 (380)
82 PRK02731 histidinol-phosphate 100.0 6.1E-42 1.3E-46 323.3 35.9 336 43-416 30-365 (367)
83 PRK08637 hypothetical protein; 100.0 1.8E-41 3.9E-46 321.5 37.8 357 46-418 4-387 (388)
84 PRK04870 histidinol-phosphate 100.0 4.5E-42 9.7E-47 322.6 33.4 327 44-414 25-355 (356)
85 PRK03317 histidinol-phosphate 100.0 5.8E-42 1.3E-46 323.1 34.2 335 46-417 27-364 (368)
86 PRK05387 histidinol-phosphate 100.0 1.3E-41 2.8E-46 319.5 33.7 328 44-416 23-352 (353)
87 PRK09105 putative aminotransfe 100.0 2.6E-41 5.6E-46 317.4 35.1 324 45-415 43-368 (370)
88 PRK08153 histidinol-phosphate 100.0 5E-41 1.1E-45 316.1 36.4 335 45-420 32-368 (369)
89 KOG0256 1-aminocyclopropane-1- 100.0 2.4E-41 5.3E-46 297.0 31.3 329 80-418 114-462 (471)
90 PRK14807 histidinol-phosphate 100.0 1.4E-40 3.1E-45 311.3 36.8 326 45-414 22-349 (351)
91 TIGR01141 hisC histidinol-phos 100.0 4.8E-41 1E-45 314.8 32.0 329 43-412 17-346 (346)
92 PRK01688 histidinol-phosphate 100.0 5.4E-41 1.2E-45 313.7 28.8 321 45-411 28-350 (351)
93 PRK04781 histidinol-phosphate 100.0 4.7E-40 1E-44 308.7 34.6 303 80-413 53-359 (364)
94 PRK07908 hypothetical protein; 100.0 1.1E-39 2.5E-44 305.3 36.7 325 43-416 20-346 (349)
95 PRK03321 putative aminotransfe 100.0 6.3E-40 1.4E-44 307.7 32.4 329 45-416 22-350 (352)
96 PRK00950 histidinol-phosphate 100.0 2.9E-39 6.2E-44 304.6 33.3 326 43-415 32-360 (361)
97 PRK04635 histidinol-phosphate 100.0 2.4E-39 5.1E-44 303.4 29.7 321 44-413 30-351 (354)
98 PRK14808 histidinol-phosphate 100.0 1.3E-38 2.9E-43 295.3 33.5 317 43-413 17-333 (335)
99 PRK03967 histidinol-phosphate 100.0 1.9E-38 4E-43 294.9 34.1 319 44-418 17-335 (337)
100 PRK06425 histidinol-phosphate 100.0 2E-38 4.3E-43 294.3 31.9 312 46-415 17-331 (332)
101 TIGR01140 L_thr_O3P_dcar L-thr 100.0 2.5E-38 5.3E-43 293.4 30.9 312 43-411 15-329 (330)
102 PRK05664 threonine-phosphate d 100.0 1.7E-37 3.7E-42 287.7 35.9 308 45-416 20-327 (330)
103 PRK06959 putative threonine-ph 100.0 1.5E-37 3.2E-42 288.5 34.6 310 45-419 24-335 (339)
104 KOG0634 Aromatic amino acid am 100.0 6.7E-38 1.5E-42 277.7 30.2 394 8-420 4-469 (472)
105 PRK08354 putative aminotransfe 100.0 7.8E-37 1.7E-41 281.0 35.5 301 43-410 6-308 (311)
106 cd00609 AAT_like Aspartate ami 100.0 6E-36 1.3E-40 281.3 40.3 346 48-412 1-349 (350)
107 COG3977 Alanine-alpha-ketoisov 100.0 1.2E-33 2.7E-38 238.6 31.9 367 26-420 14-414 (417)
108 PRK10874 cysteine sulfinate de 100.0 1.7E-33 3.7E-38 268.8 35.3 333 45-418 18-399 (401)
109 TIGR03392 FeS_syn_CsdA cystein 100.0 3.6E-33 7.9E-38 266.2 36.1 333 45-418 15-396 (398)
110 PRK13238 tnaA tryptophanase/L- 100.0 1.4E-33 3E-38 269.4 33.0 367 19-416 12-432 (460)
111 COG0520 csdA Selenocysteine ly 100.0 2.3E-32 5E-37 255.5 36.9 345 28-416 8-404 (405)
112 PLN02822 serine palmitoyltrans 100.0 1.4E-32 3E-37 265.0 32.9 349 43-420 107-480 (481)
113 PLN02855 Bifunctional selenocy 100.0 4.5E-32 9.8E-37 260.4 35.3 336 44-419 30-420 (424)
114 PRK09295 bifunctional cysteine 100.0 4.7E-32 1E-36 259.0 35.1 332 45-416 22-403 (406)
115 TIGR03576 pyridox_MJ0158 pyrid 100.0 1.1E-31 2.5E-36 248.3 34.0 309 58-415 29-345 (346)
116 TIGR01979 sufS cysteine desulf 100.0 1.9E-31 4.2E-36 255.0 36.3 335 43-418 15-402 (403)
117 TIGR01822 2am3keto_CoA 2-amino 100.0 5.6E-31 1.2E-35 251.1 35.8 332 43-418 36-390 (393)
118 KOG0258 Alanine aminotransfera 100.0 2E-31 4.3E-36 233.0 29.6 346 65-419 89-471 (475)
119 COG1448 TyrB Aspartate/tyrosin 100.0 5E-31 1.1E-35 232.1 27.3 372 19-414 4-395 (396)
120 TIGR00858 bioF 8-amino-7-oxono 100.0 1.6E-30 3.4E-35 245.4 32.9 327 43-412 14-360 (360)
121 COG1104 NifS Cysteine sulfinat 100.0 1.6E-30 3.4E-35 233.7 30.2 339 47-420 2-380 (386)
122 PRK02627 acetylornithine amino 100.0 1.8E-30 3.9E-35 247.8 32.7 341 43-418 37-395 (396)
123 PRK06939 2-amino-3-ketobutyrat 100.0 4.3E-30 9.2E-35 245.6 34.5 337 43-418 40-394 (397)
124 PRK01278 argD acetylornithine 100.0 2.6E-30 5.6E-35 245.6 32.6 338 43-417 29-388 (389)
125 cd06451 AGAT_like Alanine-glyo 100.0 2.4E-30 5.2E-35 243.5 32.1 319 61-415 8-355 (356)
126 PRK13392 5-aminolevulinate syn 100.0 6.2E-30 1.3E-34 244.6 34.2 333 44-418 45-398 (410)
127 TIGR01976 am_tr_V_VC1184 cyste 100.0 6.2E-30 1.3E-34 244.2 33.0 324 47-411 18-397 (397)
128 TIGR03402 FeS_nifS cysteine de 100.0 6.6E-30 1.4E-34 242.3 32.8 334 49-419 2-374 (379)
129 PRK02948 cysteine desulfurase; 100.0 4.7E-30 1E-34 243.5 30.9 334 48-418 2-375 (381)
130 TIGR01825 gly_Cac_T_rel pyrido 100.0 3E-29 6.5E-34 238.6 35.4 337 42-418 30-382 (385)
131 PRK05958 8-amino-7-oxononanoat 100.0 2.3E-29 4.9E-34 239.7 34.5 330 43-415 37-385 (385)
132 TIGR03403 nifS_epsilon cystein 100.0 1.9E-29 4.1E-34 239.3 33.5 338 48-419 1-377 (382)
133 PLN02483 serine palmitoyltrans 100.0 3.2E-29 7E-34 242.1 34.7 336 44-419 99-468 (489)
134 PRK07179 hypothetical protein; 100.0 6.9E-29 1.5E-33 237.1 36.0 332 43-418 52-399 (407)
135 TIGR01821 5aminolev_synth 5-am 100.0 4.7E-29 1E-33 238.0 34.7 333 44-418 44-397 (402)
136 TIGR00707 argD acetylornithine 100.0 2.8E-29 6.1E-34 238.3 31.6 335 43-415 25-379 (379)
137 PRK03244 argD acetylornithine 100.0 1.5E-29 3.2E-34 241.3 29.2 342 43-419 41-396 (398)
138 cd06453 SufS_like Cysteine des 100.0 3.9E-29 8.5E-34 236.8 30.9 315 62-411 10-373 (373)
139 PRK10534 L-threonine aldolase; 100.0 2.4E-29 5.3E-34 234.3 28.4 315 47-416 1-332 (333)
140 PLN02409 serine--glyoxylate am 100.0 1.9E-28 4.1E-33 232.8 34.9 325 62-419 19-374 (401)
141 PLN02721 threonine aldolase 100.0 8.8E-29 1.9E-33 232.8 32.4 328 46-416 6-351 (353)
142 PRK09064 5-aminolevulinate syn 100.0 1.6E-28 3.6E-33 234.8 34.5 331 44-418 45-398 (407)
143 cd06502 TA_like Low-specificit 100.0 6.5E-29 1.4E-33 232.2 29.8 313 61-413 8-337 (338)
144 TIGR02539 SepCysS Sep-tRNA:Cys 100.0 2.4E-28 5.1E-33 230.2 33.4 322 62-418 19-369 (370)
145 cd06454 KBL_like KBL_like; thi 100.0 2.2E-28 4.8E-33 229.7 33.2 327 46-414 2-348 (349)
146 cd00617 Tnase_like Tryptophana 100.0 1.9E-28 4.2E-33 230.7 32.3 345 43-417 9-408 (431)
147 TIGR01977 am_tr_V_EF2568 cyste 100.0 1.1E-28 2.4E-33 234.0 30.9 334 49-413 2-375 (376)
148 cd00378 SHMT Serine-glycine hy 100.0 4.5E-28 9.7E-33 231.7 32.6 339 45-417 19-385 (402)
149 PRK02936 argD acetylornithine 100.0 4.7E-28 1E-32 229.4 32.1 336 42-415 26-377 (377)
150 TIGR02006 IscS cysteine desulf 100.0 5.5E-28 1.2E-32 230.4 32.2 337 47-419 4-379 (402)
151 KOG0633 Histidinol phosphate a 100.0 9.8E-29 2.1E-33 205.0 23.2 287 107-413 83-373 (375)
152 PRK13393 5-aminolevulinate syn 100.0 1.6E-27 3.4E-32 227.6 35.2 333 44-418 44-397 (406)
153 cd06452 SepCysS Sep-tRNA:Cys-t 100.0 1.1E-27 2.4E-32 225.4 33.6 322 61-415 11-360 (361)
154 PRK04073 rocD ornithine--oxo-a 100.0 7.7E-28 1.7E-32 228.8 30.4 335 42-415 37-395 (396)
155 PRK05093 argD bifunctional N-s 100.0 1.9E-27 4.2E-32 226.6 32.0 336 42-418 37-401 (403)
156 cd00610 OAT_like Acetyl ornith 100.0 5.5E-28 1.2E-32 232.2 28.5 347 43-415 34-413 (413)
157 TIGR03301 PhnW-AepZ 2-aminoeth 100.0 4.7E-27 1E-31 221.3 32.5 316 62-414 9-354 (355)
158 PRK09331 Sep-tRNA:Cys-tRNA syn 100.0 1.2E-26 2.5E-31 219.9 34.1 338 44-418 17-382 (387)
159 cd00613 GDC-P Glycine cleavage 100.0 6.6E-27 1.4E-31 223.6 32.5 330 44-411 19-398 (398)
160 PRK14012 cysteine desulfurase; 100.0 9.2E-27 2E-31 222.3 32.8 336 47-419 4-381 (404)
161 PF00266 Aminotran_5: Aminotra 100.0 1.4E-26 3.1E-31 218.8 33.4 320 48-407 1-371 (371)
162 PRK13520 L-tyrosine decarboxyl 100.0 1.6E-26 3.5E-31 218.8 33.7 319 62-416 31-370 (371)
163 PRK12381 bifunctional succinyl 100.0 6.1E-27 1.3E-31 222.9 30.8 345 42-421 36-403 (406)
164 PLN02651 cysteine desulfurase 100.0 8.1E-27 1.8E-31 219.7 30.9 322 48-405 1-364 (364)
165 TIGR02326 transamin_PhnW 2-ami 100.0 1.5E-26 3.3E-31 218.0 31.9 317 62-415 13-360 (363)
166 PRK07049 methionine gamma-lyas 100.0 2.5E-26 5.4E-31 218.3 33.1 229 81-345 78-320 (427)
167 PRK13479 2-aminoethylphosphona 100.0 2.2E-26 4.8E-31 217.4 31.9 324 61-419 14-365 (368)
168 COG0156 BioF 7-keto-8-aminopel 100.0 3.9E-26 8.5E-31 209.4 31.4 329 43-414 37-387 (388)
169 COG4992 ArgD Ornithine/acetylo 100.0 2.2E-26 4.7E-31 206.6 28.7 340 43-420 40-401 (404)
170 TIGR00713 hemL glutamate-1-sem 100.0 1.9E-26 4E-31 221.4 29.6 344 42-417 45-422 (423)
171 PF12897 Aminotran_MocR: Alani 100.0 1.8E-26 3.9E-31 203.7 25.7 311 80-416 61-414 (425)
172 PLN03227 serine palmitoyltrans 100.0 5.8E-26 1.3E-30 214.5 31.1 337 48-418 1-383 (392)
173 PRK08088 4-aminobutyrate amino 100.0 8.2E-26 1.8E-30 216.3 31.1 355 42-418 38-424 (425)
174 PLN00144 acetylornithine trans 100.0 9.8E-26 2.1E-30 212.2 30.7 341 43-418 13-381 (382)
175 cd06450 DOPA_deC_like DOPA dec 100.0 1.7E-26 3.7E-31 216.5 24.3 309 64-413 12-344 (345)
176 TIGR03246 arg_catab_astC succi 100.0 2.1E-25 4.6E-30 211.7 31.9 342 43-418 33-396 (397)
177 PRK00854 rocD ornithine--oxo-a 100.0 2.1E-25 4.4E-30 213.0 32.0 334 43-416 39-400 (401)
178 TIGR03812 tyr_de_CO2_Arch tyro 100.0 2.3E-25 5.1E-30 211.0 32.0 314 64-413 33-372 (373)
179 PRK08247 cystathionine gamma-s 100.0 2.6E-25 5.7E-30 208.4 31.4 289 81-417 47-364 (366)
180 PTZ00125 ornithine aminotransf 100.0 1.8E-25 4E-30 213.5 30.8 344 43-420 29-398 (400)
181 PRK04260 acetylornithine amino 100.0 3.8E-25 8.3E-30 209.0 32.6 333 43-414 27-374 (375)
182 PRK06234 methionine gamma-lyas 100.0 1.4E-25 3.1E-30 212.2 29.0 287 85-417 62-397 (400)
183 PLN02242 methionine gamma-lyas 99.9 4E-25 8.8E-30 209.3 29.4 216 86-340 75-300 (418)
184 KOG1549 Cysteine desulfurase N 99.9 2.8E-25 6.1E-30 200.5 26.4 349 43-420 40-421 (428)
185 PRK07505 hypothetical protein; 99.9 1.7E-24 3.7E-29 206.4 33.1 330 43-417 44-399 (402)
186 COG0075 Serine-pyruvate aminot 99.9 2.5E-24 5.3E-29 195.5 31.8 330 61-419 14-365 (383)
187 TIGR03235 DNA_S_dndA cysteine 99.9 1.2E-25 2.5E-30 211.2 24.2 310 62-407 9-348 (353)
188 PRK00451 glycine dehydrogenase 99.9 8.3E-25 1.8E-29 211.6 30.7 326 46-415 69-446 (447)
189 PRK04612 argD acetylornithine 99.9 3.4E-24 7.3E-29 202.8 33.9 347 42-422 37-408 (408)
190 PRK00011 glyA serine hydroxyme 99.9 2.3E-24 5.1E-29 206.8 33.1 335 44-417 24-389 (416)
191 TIGR00700 GABAtrnsam 4-aminobu 99.9 1.2E-24 2.7E-29 207.7 30.9 353 42-416 30-419 (420)
192 PRK08776 cystathionine gamma-s 99.9 2.5E-24 5.5E-29 203.2 32.4 215 88-340 61-281 (405)
193 PRK06918 4-aminobutyrate amino 99.9 3.3E-24 7.3E-29 206.3 33.5 355 42-420 51-446 (451)
194 PRK08133 O-succinylhomoserine 99.9 2.3E-24 5E-29 203.3 31.5 220 87-345 61-286 (390)
195 PRK06767 methionine gamma-lyas 99.9 2E-24 4.3E-29 203.8 30.8 288 82-416 57-384 (386)
196 TIGR01437 selA_rel uncharacter 99.9 1.2E-24 2.7E-29 203.5 28.8 326 44-414 7-362 (363)
197 PRK07504 O-succinylhomoserine 99.9 4.9E-24 1.1E-28 201.4 33.1 289 82-419 61-397 (398)
198 PRK09792 4-aminobutyrate trans 99.9 8.4E-24 1.8E-28 201.5 34.4 350 42-416 37-420 (421)
199 TIGR02080 O_succ_thio_ly O-suc 99.9 3.6E-24 7.7E-29 201.1 30.5 227 80-345 45-277 (382)
200 PRK08249 cystathionine gamma-s 99.9 4.8E-24 1E-28 201.1 31.5 220 87-345 64-289 (398)
201 PRK08045 cystathionine gamma-s 99.9 6E-24 1.3E-28 199.6 32.0 292 80-420 46-385 (386)
202 PRK07810 O-succinylhomoserine 99.9 5.3E-24 1.1E-28 201.2 31.5 226 81-345 65-296 (403)
203 PLN02955 8-amino-7-oxononanoat 99.9 1.9E-23 4.2E-28 196.1 34.7 325 45-418 102-462 (476)
204 cd00614 CGS_like CGS_like: Cys 99.9 5.7E-24 1.2E-28 200.0 30.9 282 86-415 39-368 (369)
205 PRK09028 cystathionine beta-ly 99.9 1.5E-23 3.2E-28 195.9 33.3 244 61-345 35-286 (394)
206 COG0160 GabT 4-aminobutyrate a 99.9 1.3E-23 2.7E-28 194.7 32.2 353 41-418 52-446 (447)
207 PRK07811 cystathionine gamma-s 99.9 8E-24 1.7E-28 199.5 31.5 222 86-345 60-287 (388)
208 PRK06460 hypothetical protein; 99.9 8.1E-24 1.8E-28 198.6 31.3 221 86-345 44-270 (376)
209 PRK07503 methionine gamma-lyas 99.9 7.2E-24 1.6E-28 200.6 31.2 215 87-340 65-287 (403)
210 PRK08861 cystathionine gamma-s 99.9 9.2E-24 2E-28 197.6 31.5 221 87-345 53-279 (388)
211 PRK04366 glycine dehydrogenase 99.9 2.8E-23 6.1E-28 200.9 35.8 341 49-419 72-450 (481)
212 PRK06777 4-aminobutyrate amino 99.9 8.9E-24 1.9E-28 201.3 31.7 348 42-416 37-420 (421)
213 PRK05937 8-amino-7-oxononanoat 99.9 1.9E-23 4.1E-28 196.9 33.3 327 44-420 3-353 (370)
214 TIGR01325 O_suc_HS_sulf O-succ 99.9 1.4E-23 2.9E-28 197.7 31.8 220 82-341 50-275 (380)
215 PLN02624 ornithine-delta-amino 99.9 9.6E-24 2.1E-28 203.6 31.4 344 42-418 72-445 (474)
216 TIGR01814 kynureninase kynuren 99.9 8.2E-24 1.8E-28 202.0 30.1 333 45-415 26-405 (406)
217 TIGR01328 met_gam_lyase methio 99.9 1.3E-23 2.9E-28 198.0 31.0 220 87-345 59-286 (391)
218 PRK08360 4-aminobutyrate amino 99.9 5E-23 1.1E-27 196.7 34.2 351 42-420 38-429 (443)
219 TIGR01885 Orn_aminotrans ornit 99.9 2E-23 4.4E-28 198.9 31.1 335 42-415 34-400 (401)
220 PRK08574 cystathionine gamma-s 99.9 2.6E-23 5.7E-28 195.4 30.9 215 87-340 53-273 (385)
221 PRK07582 cystathionine gamma-l 99.9 1.9E-23 4.1E-28 195.5 29.6 283 81-417 46-365 (366)
222 PRK00062 glutamate-1-semialdeh 99.9 9.7E-24 2.1E-28 201.8 28.1 347 42-418 47-425 (426)
223 PRK06058 4-aminobutyrate amino 99.9 5.4E-23 1.2E-27 197.3 33.2 351 42-417 53-442 (443)
224 PRK08117 4-aminobutyrate amino 99.9 4.9E-23 1.1E-27 197.7 32.7 353 42-421 40-433 (433)
225 PRK05968 hypothetical protein; 99.9 5.3E-23 1.1E-27 194.0 31.3 283 88-418 64-387 (389)
226 PRK07050 cystathionine beta-ly 99.9 3.9E-23 8.5E-28 194.9 29.9 289 87-418 65-392 (394)
227 PRK09264 diaminobutyrate--2-ox 99.9 1.7E-22 3.6E-27 193.0 33.5 352 42-420 36-419 (425)
228 PRK07495 4-aminobutyrate amino 99.9 1.8E-22 3.9E-27 192.1 32.8 353 42-420 37-424 (425)
229 PLN02724 Molybdenum cofactor s 99.9 6.2E-23 1.3E-27 209.8 31.2 342 46-417 34-488 (805)
230 PRK03715 argD acetylornithine 99.9 2.3E-22 5E-27 189.9 32.6 339 43-418 34-394 (395)
231 PRK08248 O-acetylhomoserine am 99.9 1.4E-22 3.1E-27 192.5 31.4 228 87-345 64-322 (431)
232 PRK05964 adenosylmethionine--8 99.9 9.2E-23 2E-27 195.2 30.3 347 42-418 39-423 (423)
233 TIGR02407 ectoine_ectB diamino 99.9 2.2E-22 4.9E-27 191.2 32.1 348 42-417 32-412 (412)
234 TIGR01329 cysta_beta_ly_E cyst 99.9 1.2E-22 2.6E-27 190.9 29.7 283 89-418 49-376 (378)
235 PRK07269 cystathionine gamma-s 99.9 1.8E-22 3.9E-27 188.1 29.9 286 87-416 54-363 (364)
236 KOG1411 Aspartate aminotransfe 99.9 8E-24 1.7E-28 182.7 18.0 378 9-416 24-424 (427)
237 TIGR01326 OAH_OAS_sulfhy OAH/O 99.9 2.5E-22 5.5E-27 191.2 30.0 159 87-271 57-219 (418)
238 cd00616 AHBA_syn 3-amino-5-hyd 99.9 5.3E-22 1.1E-26 186.7 31.9 301 69-412 3-352 (352)
239 TIGR02379 ECA_wecE TDP-4-keto- 99.9 1.2E-21 2.6E-26 183.8 33.8 309 64-415 10-375 (376)
240 PRK08064 cystathionine beta-ly 99.9 5.2E-22 1.1E-26 187.3 31.4 214 88-340 55-274 (390)
241 KOG1412 Aspartate aminotransfe 99.9 2.5E-22 5.4E-27 171.1 25.8 370 21-419 10-407 (410)
242 COG2008 GLY1 Threonine aldolas 99.9 2.2E-22 4.8E-27 177.3 26.4 325 48-415 2-341 (342)
243 PRK06084 O-acetylhomoserine am 99.9 6.9E-22 1.5E-26 187.7 30.5 228 87-345 58-317 (425)
244 PRK06702 O-acetylhomoserine am 99.9 7.3E-22 1.6E-26 186.1 30.0 229 87-345 61-319 (432)
245 PRK05939 hypothetical protein; 99.9 1.8E-21 3.9E-26 183.4 32.3 287 89-417 49-396 (397)
246 TIGR01324 cysta_beta_ly_B cyst 99.9 2.4E-21 5.3E-26 181.3 32.7 284 89-417 52-376 (377)
247 PRK11658 UDP-4-amino-4-deoxy-L 99.9 3.3E-21 7.2E-26 181.8 32.7 315 65-416 14-378 (379)
248 cd00611 PSAT_like Phosphoserin 99.9 5.3E-22 1.1E-26 185.7 26.9 312 61-414 8-353 (355)
249 PRK03080 phosphoserine aminotr 99.9 3.8E-22 8.3E-27 188.1 26.1 326 47-420 13-376 (378)
250 TIGR00709 dat 2,4-diaminobutyr 99.9 4.8E-21 1E-25 183.6 33.6 353 42-419 36-437 (442)
251 PRK13034 serine hydroxymethylt 99.9 6.6E-21 1.4E-25 181.4 34.3 354 17-417 6-392 (416)
252 PLN02509 cystathionine beta-ly 99.9 3.6E-21 7.9E-26 183.0 32.1 228 81-345 125-358 (464)
253 PRK08134 O-acetylhomoserine am 99.9 3.1E-21 6.6E-26 183.3 31.1 293 87-420 64-430 (433)
254 TIGR03372 putres_am_tran putre 99.9 2.6E-21 5.7E-26 183.8 30.3 342 42-415 72-442 (442)
255 COG0001 HemL Glutamate-1-semia 99.9 5.4E-21 1.2E-25 173.9 30.8 347 43-420 51-431 (432)
256 PRK05967 cystathionine beta-ly 99.9 5.8E-21 1.3E-25 178.2 32.0 270 112-418 81-392 (395)
257 PRK07671 cystathionine beta-ly 99.9 3.4E-21 7.4E-26 180.8 30.5 220 87-345 50-275 (377)
258 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.9 9E-21 2E-25 178.8 33.1 311 65-415 11-374 (375)
259 TIGR01364 serC_1 phosphoserine 99.9 4.2E-21 9E-26 178.1 30.0 313 62-417 2-348 (349)
260 PRK11522 putrescine--2-oxoglut 99.9 6.7E-21 1.4E-25 182.4 32.2 347 42-420 79-454 (459)
261 PRK05769 4-aminobutyrate amino 99.9 3.1E-20 6.8E-25 177.6 35.2 349 42-418 51-440 (441)
262 PRK07812 O-acetylhomoserine am 99.9 1E-20 2.2E-25 179.6 31.4 229 87-345 69-326 (436)
263 TIGR03588 PseC UDP-4-keto-6-de 99.9 2.4E-20 5.1E-25 176.7 34.0 308 65-415 10-380 (380)
264 PRK06176 cystathionine gamma-s 99.9 9.7E-21 2.1E-25 177.8 30.9 214 88-340 51-270 (380)
265 PRK07678 aminotransferase; Val 99.9 1.8E-20 3.9E-25 179.8 33.0 355 42-418 44-450 (451)
266 PRK05994 O-acetylhomoserine am 99.9 1.6E-20 3.6E-25 178.8 32.3 227 88-345 64-321 (427)
267 PRK06541 hypothetical protein; 99.9 2.4E-20 5.3E-25 179.0 33.6 355 42-419 49-457 (460)
268 PRK07482 hypothetical protein; 99.9 1.7E-20 3.8E-25 180.2 32.3 353 42-418 47-455 (461)
269 PRK05639 4-aminobutyrate amino 99.9 2.7E-20 6E-25 178.3 32.5 350 42-419 50-445 (457)
270 PLN02760 4-aminobutyrate:pyruv 99.9 2.7E-20 5.9E-25 179.8 32.5 349 43-419 87-493 (504)
271 PRK06943 adenosylmethionine--8 99.9 1.8E-20 3.8E-25 179.6 30.8 349 42-419 51-448 (453)
272 PRK08593 4-aminobutyrate amino 99.9 5.3E-20 1.2E-24 176.3 33.9 351 42-420 39-432 (445)
273 PRK05965 hypothetical protein; 99.9 2.4E-20 5.2E-25 179.1 31.3 350 42-418 43-448 (459)
274 COG0399 WecE Predicted pyridox 99.9 9.5E-20 2.1E-24 166.1 32.8 310 64-417 14-373 (374)
275 PRK08114 cystathionine beta-ly 99.9 4.2E-20 9.1E-25 172.2 31.1 220 87-345 62-289 (395)
276 TIGR01788 Glu-decarb-GAD gluta 99.9 7.1E-20 1.5E-24 173.3 33.1 338 62-418 52-430 (431)
277 PRK05355 3-phosphoserine/phosp 99.9 3.1E-20 6.7E-25 173.2 29.7 313 62-417 13-358 (360)
278 PRK13580 serine hydroxymethylt 99.9 7.4E-20 1.6E-24 172.2 32.1 342 45-418 49-446 (493)
279 PRK08742 adenosylmethionine--8 99.9 6.6E-20 1.4E-24 175.9 32.3 354 42-419 61-469 (472)
280 PRK13360 omega amino acid--pyr 99.9 1.4E-19 3E-24 173.0 34.4 351 42-418 43-441 (442)
281 PRK04013 argD acetylornithine/ 99.9 2.9E-20 6.3E-25 172.6 28.7 330 42-419 21-362 (364)
282 PTZ00094 serine hydroxymethylt 99.9 5.8E-20 1.3E-24 177.1 31.6 338 45-418 34-409 (452)
283 PRK07986 adenosylmethionine--8 99.9 4.9E-20 1.1E-24 175.1 29.9 341 42-417 40-423 (428)
284 PRK06173 adenosylmethionine--8 99.9 5.6E-20 1.2E-24 174.9 29.9 345 42-419 41-427 (429)
285 PRK06062 hypothetical protein; 99.9 8.2E-20 1.8E-24 175.1 31.1 351 42-419 50-447 (451)
286 PRK07046 aminotransferase; Val 99.9 8.8E-20 1.9E-24 174.6 31.0 341 43-419 73-452 (453)
287 PRK05630 adenosylmethionine--8 99.9 5.7E-20 1.2E-24 174.7 29.2 341 42-417 37-420 (422)
288 PRK05613 O-acetylhomoserine am 99.9 1.4E-19 3E-24 171.8 31.6 227 88-344 70-330 (437)
289 PRK06105 aminotransferase; Pro 99.9 1.1E-19 2.4E-24 174.6 31.3 350 42-419 45-451 (460)
290 KOG1368 Threonine aldolase [Am 99.9 4.8E-20 1E-24 156.5 24.9 326 45-414 21-365 (384)
291 PRK06082 4-aminobutyrate amino 99.9 1.5E-19 3.3E-24 173.5 31.8 348 43-420 70-454 (459)
292 PRK09221 beta alanine--pyruvat 99.9 1.9E-19 4.1E-24 172.3 32.1 351 42-418 46-444 (445)
293 PRK07483 hypothetical protein; 99.9 1.4E-19 3E-24 173.1 31.0 358 42-420 27-440 (443)
294 PRK07481 hypothetical protein; 99.9 4.1E-19 8.9E-24 170.3 34.0 351 42-419 39-447 (449)
295 KOG2862 Alanine-glyoxylate ami 99.9 2.2E-19 4.8E-24 153.5 28.3 320 62-419 27-384 (385)
296 PRK07030 adenosylmethionine--8 99.9 1.3E-19 2.7E-24 174.1 29.7 348 42-418 44-447 (466)
297 PF01053 Cys_Met_Meta_PP: Cys/ 99.9 3.7E-19 8E-24 165.6 31.8 289 81-416 47-386 (386)
298 PLN02414 glycine dehydrogenase 99.9 1.3E-19 2.9E-24 184.2 30.9 301 89-419 570-909 (993)
299 PRK15407 lipopolysaccharide bi 99.9 1.3E-18 2.8E-23 166.0 36.0 328 46-416 24-435 (438)
300 PRK06917 hypothetical protein; 99.9 4.8E-19 1E-23 169.6 32.9 355 42-420 28-440 (447)
301 COG0161 BioA Adenosylmethionin 99.9 9.3E-20 2E-24 168.0 26.0 354 42-420 41-446 (449)
302 cd00615 Orn_deC_like Ornithine 99.9 1.3E-20 2.8E-25 171.8 20.2 227 85-334 57-293 (294)
303 PRK02769 histidine decarboxyla 99.9 1.1E-18 2.5E-23 162.9 33.6 287 90-418 64-373 (380)
304 PRK06916 adenosylmethionine--8 99.9 2.8E-19 6E-24 171.9 30.3 349 42-419 53-457 (460)
305 PRK06938 diaminobutyrate--2-ox 99.9 1.1E-18 2.3E-23 167.6 34.2 353 42-419 60-462 (464)
306 PRK12403 putative aminotransfe 99.9 5.2E-19 1.1E-23 170.0 32.0 351 42-419 51-454 (460)
307 PRK06149 hypothetical protein; 99.9 5E-19 1.1E-23 184.4 33.8 344 43-417 583-970 (972)
308 PF01041 DegT_DnrJ_EryC1: DegT 99.9 2.6E-19 5.7E-24 168.1 28.4 306 65-412 5-363 (363)
309 PRK07480 putative aminotransfe 99.9 3E-19 6.5E-24 171.3 28.9 353 42-419 47-450 (456)
310 PRK06148 hypothetical protein; 99.9 5.2E-19 1.1E-23 184.3 32.9 346 43-418 622-1011(1013)
311 PRK07036 hypothetical protein; 99.9 5.9E-19 1.3E-23 169.7 30.9 348 42-418 48-453 (466)
312 PRK12389 glutamate-1-semialdeh 99.9 9.1E-19 2E-23 167.4 31.5 343 42-417 50-427 (428)
313 KOG1404 Alanine-glyoxylate ami 99.9 3.2E-19 7E-24 157.2 25.3 348 36-411 41-432 (442)
314 PLN02482 glutamate-1-semialdeh 99.9 8.4E-19 1.8E-23 168.0 30.5 342 43-417 97-473 (474)
315 PF04864 Alliinase_C: Allinase 99.9 2.1E-20 4.6E-25 163.4 16.6 289 88-413 44-361 (363)
316 TIGR00508 bioA adenosylmethion 99.9 7.5E-19 1.6E-23 167.6 28.7 342 43-417 43-426 (427)
317 KOG1360 5-aminolevulinate synt 99.9 1.7E-18 3.6E-23 152.8 27.4 324 58-418 181-525 (570)
318 PRK06931 diaminobutyrate--2-ox 99.9 5.2E-18 1.1E-22 162.9 33.5 357 42-420 55-457 (459)
319 PRK00615 glutamate-1-semialdeh 99.8 1.2E-18 2.5E-23 165.8 28.6 348 42-418 50-429 (433)
320 COG0626 MetC Cystathionine bet 99.8 4.1E-18 8.9E-23 156.3 30.6 282 87-417 63-394 (396)
321 TIGR01366 serC_3 phosphoserine 99.8 4.7E-19 1E-23 165.6 24.9 313 62-418 13-361 (361)
322 PRK06434 cystathionine gamma-l 99.8 3E-18 6.5E-23 160.0 29.7 278 87-416 64-383 (384)
323 TIGR02618 tyr_phenol_ly tyrosi 99.8 1.2E-17 2.7E-22 154.9 33.1 335 45-417 38-426 (450)
324 PRK08297 L-lysine aminotransfe 99.8 6.8E-18 1.5E-22 161.5 32.3 346 43-418 43-442 (443)
325 KOG1401 Acetylornithine aminot 99.8 1.4E-18 2.9E-23 154.5 25.0 349 42-419 53-432 (433)
326 TIGR03531 selenium_SpcS O-phos 99.8 4.2E-18 9E-23 160.4 29.3 285 111-415 124-444 (444)
327 PLN03226 serine hydroxymethylt 99.8 9.4E-18 2E-22 161.1 32.2 346 45-418 34-420 (475)
328 COG1103 Archaea-specific pyrid 99.8 2.2E-17 4.7E-22 138.7 27.2 323 62-418 28-381 (382)
329 PLN02590 probable tyrosine dec 99.8 6.2E-17 1.4E-21 156.2 34.5 340 66-420 146-535 (539)
330 PLN02880 tyrosine decarboxylas 99.8 3.1E-17 6.8E-22 158.3 32.5 339 66-419 98-486 (490)
331 TIGR03251 LAT_fam L-lysine 6-t 99.8 2.3E-17 5E-22 157.8 30.8 344 43-413 36-430 (431)
332 PLN03032 serine decarboxylase; 99.8 8.2E-17 1.8E-21 149.3 32.7 307 66-413 38-372 (374)
333 KOG0053 Cystathionine beta-lya 99.8 1.7E-17 3.6E-22 150.2 27.0 215 88-340 78-298 (409)
334 COG2873 MET17 O-acetylhomoseri 99.8 4.4E-17 9.6E-22 143.2 28.6 294 87-417 62-425 (426)
335 PRK13237 tyrosine phenol-lyase 99.8 2.2E-16 4.8E-21 147.1 33.6 309 82-417 73-433 (460)
336 KOG1402 Ornithine aminotransfe 99.8 1.1E-17 2.5E-22 144.1 23.0 339 44-416 58-426 (427)
337 TIGR00699 GABAtrns_euk 4-amino 99.8 2.2E-17 4.9E-22 157.2 26.7 340 42-415 55-464 (464)
338 KOG1359 Glycine C-acetyltransf 99.8 1.5E-17 3.3E-22 141.1 22.5 328 44-419 66-414 (417)
339 COG0112 GlyA Glycine/serine hy 99.8 1.1E-16 2.4E-21 142.3 27.9 338 45-417 26-390 (413)
340 PLN02271 serine hydroxymethylt 99.8 2.5E-16 5.5E-21 148.9 31.6 346 45-416 148-539 (586)
341 PLN02452 phosphoserine transam 99.8 1.2E-16 2.7E-21 148.2 29.0 324 46-417 7-363 (365)
342 PRK06209 glutamate-1-semialdeh 99.8 5.8E-17 1.2E-21 155.0 26.6 335 42-419 45-407 (431)
343 PRK04311 selenocysteine syntha 99.8 3.9E-16 8.4E-21 148.8 31.7 320 62-416 97-463 (464)
344 PLN02974 adenosylmethionine-8- 99.8 1.8E-16 3.9E-21 159.7 30.7 347 46-415 366-816 (817)
345 cd01494 AAT_I Aspartate aminot 99.8 1E-17 2.2E-22 140.3 18.1 166 89-269 2-169 (170)
346 PF00464 SHMT: Serine hydroxym 99.8 8.1E-17 1.8E-21 148.5 23.1 339 45-410 20-398 (399)
347 COG0076 GadB Glutamate decarbo 99.8 6.4E-16 1.4E-20 146.8 26.8 281 62-357 73-381 (460)
348 TIGR01365 serC_2 phosphoserine 99.8 7.9E-16 1.7E-20 142.8 26.6 315 67-417 19-373 (374)
349 TIGR00474 selA seryl-tRNA(sec) 99.7 7.7E-15 1.7E-19 139.6 30.6 313 62-411 92-453 (454)
350 TIGR00461 gcvP glycine dehydro 99.7 1.4E-14 2.9E-19 146.2 33.7 261 135-419 579-869 (939)
351 PRK05367 glycine dehydrogenase 99.7 1.1E-14 2.3E-19 149.4 33.3 305 89-419 540-877 (954)
352 TIGR03799 NOD_PanD_pyr putativ 99.7 8.9E-15 1.9E-19 141.6 31.0 263 71-350 110-433 (522)
353 PRK15029 arginine decarboxylas 99.7 8.2E-15 1.8E-19 145.6 30.5 237 83-337 201-465 (755)
354 PRK12462 phosphoserine aminotr 99.7 1.5E-14 3.2E-19 132.8 29.6 323 47-417 5-362 (364)
355 PLN02263 serine decarboxylase 99.7 1.1E-13 2.4E-18 130.5 35.7 346 28-417 75-443 (470)
356 PRK12566 glycine dehydrogenase 99.7 1.5E-14 3.3E-19 145.0 29.7 310 81-418 530-877 (954)
357 KOG1357 Serine palmitoyltransf 99.7 3.4E-16 7.4E-21 140.6 16.1 320 61-417 154-502 (519)
358 PF01276 OKR_DC_1: Orn/Lys/Arg 99.7 8.3E-16 1.8E-20 142.5 16.9 237 85-340 64-324 (417)
359 PF00202 Aminotran_3: Aminotra 99.7 3.8E-15 8.1E-20 138.1 18.2 271 43-334 14-314 (339)
360 PF01212 Beta_elim_lyase: Beta 99.7 4.5E-16 9.8E-21 139.6 11.6 245 63-338 7-272 (290)
361 PRK05367 glycine dehydrogenase 99.6 3.1E-13 6.7E-18 138.8 31.4 295 63-412 90-437 (954)
362 PRK13578 ornithine decarboxyla 99.6 1.5E-13 3.2E-18 135.4 27.1 170 85-269 172-368 (720)
363 TIGR02617 tnaA_trp_ase tryptop 99.6 5.8E-13 1.2E-17 122.8 28.0 340 44-417 40-441 (467)
364 KOG1358 Serine palmitoyltransf 99.6 4.3E-14 9.4E-19 125.0 19.4 341 43-418 92-466 (467)
365 PRK15400 lysine decarboxylase 99.6 4.3E-13 9.4E-18 132.0 26.9 303 85-416 193-558 (714)
366 PRK15399 lysine decarboxylase 99.6 2E-12 4.3E-17 127.4 30.8 306 85-417 193-559 (713)
367 PF00282 Pyridoxal_deC: Pyrido 99.6 7E-13 1.5E-17 124.0 26.5 269 67-350 56-368 (373)
368 PLN02414 glycine dehydrogenase 99.6 1.3E-12 2.8E-17 133.7 30.1 298 62-412 116-464 (993)
369 COG3844 Kynureninase [Amino ac 99.6 5.7E-12 1.2E-16 109.3 26.2 340 43-421 28-406 (407)
370 KOG1403 Predicted alanine-glyo 99.6 4E-13 8.7E-18 114.8 17.5 356 35-418 37-438 (452)
371 KOG1383 Glutamate decarboxylas 99.5 1.1E-11 2.4E-16 112.7 26.7 306 87-419 116-448 (491)
372 COG1982 LdcC Arginine/lysine/o 99.5 7.5E-11 1.6E-15 111.8 28.2 236 87-342 70-318 (557)
373 KOG2467 Glycine/serine hydroxy 99.5 7.3E-11 1.6E-15 103.9 24.5 332 63-416 52-425 (477)
374 TIGR03811 tyr_de_CO2_Ent tyros 99.5 4.5E-10 9.8E-15 110.1 32.8 256 64-336 96-475 (608)
375 TIGR00461 gcvP glycine dehydro 99.4 1.1E-09 2.5E-14 111.1 31.3 298 62-412 77-426 (939)
376 COG1003 GcvP Glycine cleavage 99.3 1.2E-09 2.6E-14 98.8 24.8 307 86-419 104-449 (496)
377 PF02347 GDC-P: Glycine cleava 99.3 1.2E-09 2.6E-14 101.7 25.4 274 90-411 113-429 (429)
378 PLN02994 1-aminocyclopropane-1 99.3 2.8E-11 6.1E-16 97.5 12.0 99 42-146 40-153 (153)
379 COG1921 SelA Selenocysteine sy 99.2 1E-08 2.2E-13 93.3 21.3 223 62-310 38-269 (395)
380 COG1932 SerC Phosphoserine ami 99.1 4E-08 8.6E-13 87.7 23.8 327 45-418 4-364 (365)
381 COG0403 GcvP Glycine cleavage 99.1 5.9E-07 1.3E-11 81.8 29.1 305 62-414 88-447 (450)
382 KOG1405 4-aminobutyrate aminot 99.0 3.3E-08 7.2E-13 87.1 18.8 205 183-417 270-483 (484)
383 KOG0628 Aromatic-L-amino-acid/ 99.0 1.2E-06 2.7E-11 80.2 29.3 321 85-418 107-472 (511)
384 PF06838 Met_gamma_lyase: Meth 99.0 4E-08 8.7E-13 87.7 19.3 155 117-289 79-249 (403)
385 PF05889 SLA_LP_auto_ag: Solub 98.9 4.7E-07 1E-11 82.6 22.8 288 111-416 75-389 (389)
386 COG3033 TnaA Tryptophanase [Am 98.9 1.9E-06 4.2E-11 76.5 25.7 340 47-417 48-444 (471)
387 PF03841 SelA: L-seryl-tRNA se 98.9 3.4E-09 7.3E-14 95.6 8.3 251 62-336 17-296 (367)
388 KOG0629 Glutamate decarboxylas 98.8 4.7E-07 1E-11 82.0 18.7 261 138-415 201-507 (510)
389 PRK12566 glycine dehydrogenase 98.8 1.1E-05 2.4E-10 82.3 28.6 297 62-412 92-439 (954)
390 COG4100 Cystathionine beta-lya 98.7 1.5E-06 3.2E-11 75.3 15.8 174 82-270 59-249 (416)
391 KOG3846 L-kynurenine hydrolase 98.6 4.5E-05 9.9E-10 66.5 22.9 342 44-419 65-463 (465)
392 KOG2790 Phosphoserine aminotra 98.0 0.0007 1.5E-08 58.6 16.5 328 44-417 5-368 (370)
393 KOG2040 Glycine dehydrogenase 98.0 0.0017 3.6E-08 62.7 20.3 301 87-417 578-918 (1001)
394 PLN02672 methionine S-methyltr 96.9 0.073 1.6E-06 56.4 17.7 252 25-301 369-640 (1082)
395 KOG3843 Predicted serine hydro 96.6 0.015 3.3E-07 50.0 9.0 127 132-260 100-230 (432)
396 KOG2040 Glycine dehydrogenase 96.5 0.34 7.3E-06 47.5 18.0 261 111-412 181-478 (1001)
397 COG2102 Predicted ATPases of P 86.7 9.2 0.0002 32.7 9.8 99 112-220 3-116 (223)
398 COG1105 FruK Fructose-1-phosph 80.4 18 0.00039 33.0 9.6 57 169-227 109-170 (310)
399 COG0552 FtsY Signal recognitio 79.0 13 0.00027 34.2 8.1 101 117-226 150-270 (340)
400 KOG1465 Translation initiation 76.3 59 0.0013 29.3 12.2 151 108-276 160-317 (353)
401 PRK10595 SOS cell division inh 73.4 49 0.0011 27.0 10.4 86 130-219 52-137 (164)
402 PF05368 NmrA: NmrA-like famil 71.5 39 0.00084 29.3 9.4 91 119-221 8-99 (233)
403 TIGR03573 WbuX N-acetyl sugar 70.2 44 0.00096 31.2 9.9 109 110-232 60-176 (343)
404 PRK10886 DnaA initiator-associ 69.4 47 0.001 28.2 9.0 41 174-221 101-141 (196)
405 TIGR00623 sula cell division i 67.3 69 0.0015 26.3 9.7 85 130-220 56-142 (168)
406 TIGR00290 MJ0570_dom MJ0570-re 66.2 87 0.0019 27.2 10.1 98 113-220 4-115 (223)
407 PF04392 ABC_sub_bind: ABC tra 65.7 52 0.0011 29.9 9.3 142 65-220 14-164 (294)
408 cd06568 GH20_SpHex_like A subg 61.6 20 0.00043 33.3 5.7 73 148-224 24-98 (329)
409 cd02742 GH20_hexosaminidase Be 61.2 21 0.00045 32.7 5.8 72 148-224 22-95 (303)
410 COG1066 Sms Predicted ATP-depe 59.4 1.5E+02 0.0033 28.4 10.8 113 104-221 86-215 (456)
411 COG4050 Uncharacterized protei 59.4 30 0.00065 26.1 5.1 45 367-422 107-151 (152)
412 COG0296 GlgB 1,4-alpha-glucan 57.5 14 0.0003 37.3 4.1 40 190-232 204-243 (628)
413 PF01902 ATP_bind_4: ATP-bindi 55.8 94 0.002 26.9 8.5 98 113-220 4-115 (218)
414 cd06562 GH20_HexA_HexB-like Be 55.0 26 0.00056 32.9 5.3 67 149-224 25-93 (348)
415 cd06570 GH20_chitobiase-like_1 54.3 29 0.00062 31.9 5.4 65 149-224 25-91 (311)
416 TIGR00289 conserved hypothetic 54.0 1.5E+02 0.0032 25.7 9.9 98 113-220 4-115 (222)
417 PRK13937 phosphoheptose isomer 53.5 1.3E+02 0.0029 25.1 9.9 35 179-220 103-137 (188)
418 PRK05678 succinyl-CoA syntheta 53.4 60 0.0013 29.5 7.2 48 172-225 78-125 (291)
419 PLN00191 enolase 50.7 74 0.0016 31.0 7.8 99 118-223 296-395 (457)
420 PRK11070 ssDNA exonuclease Rec 50.4 1.7E+02 0.0036 29.7 10.4 99 117-225 53-160 (575)
421 COG0352 ThiE Thiamine monophos 50.2 81 0.0018 27.1 7.1 52 173-226 24-75 (211)
422 TIGR01470 cysG_Nterm siroheme 50.2 1.6E+02 0.0035 25.1 10.5 95 109-224 8-103 (205)
423 cd00532 MGS-like MGS-like doma 49.7 1.1E+02 0.0024 23.0 10.3 92 124-224 15-107 (112)
424 PRK04296 thymidine kinase; Pro 49.3 1.1E+02 0.0024 25.6 7.9 96 119-227 16-117 (190)
425 PF13460 NAD_binding_10: NADH( 49.0 1.3E+02 0.0028 24.6 8.4 77 126-217 14-90 (183)
426 PF02603 Hpr_kinase_N: HPr Ser 48.6 29 0.00063 27.0 3.9 39 174-221 72-110 (127)
427 TIGR02717 AcCoA-syn-alpha acet 48.0 1.4E+02 0.003 29.1 9.3 58 172-230 77-135 (447)
428 cd01422 MGS Methylglyoxal synt 47.7 1.2E+02 0.0027 23.0 9.2 63 154-221 44-106 (115)
429 cd01018 ZntC Metal binding pro 46.1 2.2E+02 0.0047 25.4 11.6 74 133-221 169-245 (266)
430 PRK05234 mgsA methylglyoxal sy 46.1 1.5E+02 0.0033 23.6 10.2 48 174-224 65-114 (142)
431 COG1184 GCD2 Translation initi 45.9 2.4E+02 0.0051 25.8 10.1 104 108-221 117-226 (301)
432 smart00642 Aamy Alpha-amylase 45.7 30 0.00064 28.4 3.7 25 203-227 70-94 (166)
433 KOG4589 Cell division protein 45.5 1.9E+02 0.004 24.4 8.1 35 178-214 130-165 (232)
434 KOG1201 Hydroxysteroid 17-beta 45.4 1.5E+02 0.0033 26.9 8.2 98 108-211 36-144 (300)
435 PF14258 DUF4350: Domain of un 44.2 97 0.0021 20.8 6.2 60 147-222 10-70 (70)
436 KOG2741 Dimeric dihydrodiol de 44.1 95 0.0021 28.7 6.9 75 141-227 58-133 (351)
437 COG1435 Tdk Thymidine kinase [ 44.0 1.1E+02 0.0025 25.8 6.8 93 117-221 15-115 (201)
438 TIGR01019 sucCoAalpha succinyl 42.9 1.1E+02 0.0024 27.7 7.2 48 172-225 76-123 (286)
439 PRK00077 eno enolase; Provisio 42.5 86 0.0019 30.3 6.9 85 129-220 272-360 (425)
440 PF03652 UPF0081: Uncharacteri 42.3 93 0.002 24.5 5.9 58 170-227 37-99 (135)
441 cd03313 enolase Enolase: Enola 41.9 80 0.0017 30.4 6.5 93 120-220 264-360 (408)
442 cd00951 KDGDH 5-dehydro-4-deox 41.2 1E+02 0.0022 28.0 6.8 47 168-215 15-65 (289)
443 COG0656 ARA1 Aldo/keto reducta 40.6 2.4E+02 0.0052 25.5 8.8 130 67-220 30-187 (280)
444 PTZ00081 enolase; Provisional 38.0 1.3E+02 0.0029 29.1 7.3 96 118-221 282-381 (439)
445 cd06569 GH20_Sm-chitobiase-lik 37.2 74 0.0016 31.0 5.5 30 195-224 89-120 (445)
446 TIGR02104 pulA_typeI pullulana 36.9 37 0.0008 34.6 3.6 26 203-228 229-254 (605)
447 PF04016 DUF364: Domain of unk 36.6 1.1E+02 0.0023 24.6 5.6 76 132-215 9-88 (147)
448 PF00128 Alpha-amylase: Alpha 36.5 35 0.00075 30.9 3.2 27 203-229 52-78 (316)
449 PRK08265 short chain dehydroge 36.3 3E+02 0.0064 24.2 9.9 54 111-164 7-60 (261)
450 KOG1467 Translation initiation 36.3 3.4E+02 0.0073 26.6 9.3 130 87-226 325-472 (556)
451 COG2984 ABC-type uncharacteriz 36.0 3.5E+02 0.0076 24.9 11.3 147 62-226 42-198 (322)
452 PF09885 DUF2112: Uncharacteri 35.8 1.2E+02 0.0025 23.7 5.2 41 366-417 102-142 (143)
453 COG2089 SpsE Sialic acid synth 35.6 3E+02 0.0065 25.4 8.5 74 134-218 102-175 (347)
454 cd01020 TroA_b Metal binding p 35.5 3.2E+02 0.0069 24.3 10.4 78 133-220 152-236 (264)
455 PRK13936 phosphoheptose isomer 35.5 2.7E+02 0.0059 23.5 10.5 38 177-221 106-143 (197)
456 KOG2865 NADH:ubiquinone oxidor 35.5 2.7E+02 0.0058 25.3 8.0 87 127-218 78-170 (391)
457 COG0826 Collagenase and relate 35.2 1.1E+02 0.0024 28.7 6.1 46 172-217 15-63 (347)
458 PF01408 GFO_IDH_MocA: Oxidore 35.0 1.9E+02 0.0041 21.6 6.7 21 201-221 98-118 (120)
459 PRK10785 maltodextrin glucosid 34.8 1.1E+02 0.0024 31.1 6.6 28 201-228 224-251 (598)
460 CHL00200 trpA tryptophan synth 34.5 3.4E+02 0.0073 24.3 9.3 95 122-221 107-207 (263)
461 PF03748 FliL: Flagellar basal 34.3 47 0.001 24.2 3.0 52 64-116 43-94 (99)
462 PF13407 Peripla_BP_4: Peripla 33.7 80 0.0017 27.6 5.0 66 147-221 20-85 (257)
463 TIGR03679 arCOG00187 arCOG0018 33.3 3.2E+02 0.0069 23.6 9.4 97 114-220 2-116 (218)
464 TIGR00160 MGSA methylglyoxal s 33.1 1.6E+02 0.0034 23.5 5.7 68 155-229 48-117 (143)
465 PF01008 IF-2B: Initiation fac 33.1 3E+02 0.0065 24.7 8.6 118 91-222 92-216 (282)
466 PRK03892 ribonuclease P protei 33.0 3.1E+02 0.0068 23.5 10.7 41 181-221 127-171 (216)
467 TIGR02402 trehalose_TreZ malto 32.7 57 0.0012 32.7 4.1 28 202-229 159-186 (542)
468 TIGR00064 ftsY signal recognit 32.6 3.6E+02 0.0079 24.2 8.9 47 178-225 149-202 (272)
469 PRK07226 fructose-bisphosphate 32.1 1.5E+02 0.0032 26.6 6.3 46 174-221 97-144 (267)
470 KOG3974 Predicted sugar kinase 31.8 1.9E+02 0.0041 25.7 6.4 48 172-224 91-140 (306)
471 KOG1177 Long chain fatty acid 31.6 2.3E+02 0.0051 27.8 7.5 74 131-213 99-173 (596)
472 PF03786 UxuA: D-mannonate deh 31.4 93 0.002 29.0 4.9 50 172-221 13-63 (351)
473 PRK00278 trpC indole-3-glycero 31.4 1.2E+02 0.0027 26.9 5.7 51 167-223 117-167 (260)
474 cd04751 Commd3 COMM_Domain con 31.0 75 0.0016 23.2 3.5 27 394-420 66-92 (95)
475 COG1091 RfbD dTDP-4-dehydrorha 30.8 4.1E+02 0.0088 24.1 9.1 99 171-272 37-155 (281)
476 cd06563 GH20_chitobiase-like T 30.6 60 0.0013 30.5 3.7 30 195-224 78-109 (357)
477 COG2185 Sbm Methylmalonyl-CoA 30.3 2.7E+02 0.0059 22.2 6.6 72 135-217 13-92 (143)
478 COG0505 CarA Carbamoylphosphat 30.3 1.8E+02 0.004 27.1 6.4 70 133-214 178-249 (368)
479 TIGR03271 methan_mark_5 putati 30.3 1.6E+02 0.0034 23.0 5.0 41 366-417 101-141 (142)
480 PF02702 KdpD: Osmosensitive K 30.2 1.6E+02 0.0035 25.1 5.6 99 117-220 16-120 (211)
481 PF13380 CoA_binding_2: CoA bi 29.9 1E+02 0.0022 23.5 4.2 43 173-225 69-111 (116)
482 TIGR01060 eno phosphopyruvate 29.9 1.6E+02 0.0036 28.4 6.6 92 121-220 266-361 (425)
483 COG0074 SucD Succinyl-CoA synt 29.7 3.1E+02 0.0067 24.8 7.5 81 135-225 45-125 (293)
484 PRK06512 thiamine-phosphate py 29.7 1.2E+02 0.0026 26.2 5.2 50 173-224 29-79 (221)
485 PRK15452 putative protease; Pr 29.5 1.5E+02 0.0033 28.8 6.2 44 136-180 5-52 (443)
486 COG0373 HemA Glutamyl-tRNA red 29.4 3.7E+02 0.0081 25.9 8.6 89 118-224 185-274 (414)
487 PF04748 Polysacc_deac_2: Dive 29.4 3.7E+02 0.008 23.1 8.8 120 89-220 73-206 (213)
488 PF03460 NIR_SIR_ferr: Nitrite 29.4 46 0.001 22.4 2.1 25 191-216 13-37 (69)
489 PRK09441 cytoplasmic alpha-amy 29.0 63 0.0014 31.8 3.7 31 196-229 77-107 (479)
490 PF02581 TMP-TENI: Thiamine mo 28.5 87 0.0019 26.0 4.0 51 172-224 14-64 (180)
491 PF02571 CbiJ: Precorrin-6x re 28.2 4.2E+02 0.0092 23.4 8.7 98 109-212 129-247 (249)
492 COG0400 Predicted esterase [Ge 28.1 3.8E+02 0.0083 22.9 9.0 104 107-214 95-204 (207)
493 TIGR00511 ribulose_e2b2 ribose 28.1 4.7E+02 0.01 23.9 9.5 116 91-221 100-222 (301)
494 KOG0630 Predicted pyridoxal-de 27.9 2.5E+02 0.0054 27.5 7.0 83 136-221 233-328 (838)
495 PF10087 DUF2325: Uncharacteri 27.7 2.4E+02 0.0052 20.5 8.3 68 145-221 13-80 (97)
496 PF02639 DUF188: Uncharacteriz 27.7 1.9E+02 0.0042 22.6 5.4 62 111-180 29-90 (130)
497 PRK03906 mannonate dehydratase 27.6 1.3E+02 0.0028 28.7 5.3 50 172-221 12-61 (385)
498 PLN03244 alpha-amylase; Provis 27.4 97 0.0021 32.4 4.6 30 201-230 439-468 (872)
499 PF02142 MGS: MGS-like domain 27.1 1.6E+02 0.0034 21.4 4.7 44 175-220 51-94 (95)
500 cd06564 GH20_DspB_LnbB-like Gl 26.8 70 0.0015 29.6 3.4 26 195-220 74-99 (326)
No 1
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.2e-62 Score=425.32 Aligned_cols=409 Identities=62% Similarity=1.099 Sum_probs=385.7
Q ss_pred cCccccHHHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHH
Q 014603 12 WGFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILP 91 (422)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~ 91 (422)
|+++.++.....+...||.+...+..--.......+|.+++|+|+.++.+++.++..+|+.+.+..+..++|+|..|++.
T Consensus 28 W~f~gs~~a~ka~~~tir~i~~~l~~~~~p~~~k~iipl~~GDPsv~~~~~ts~~a~~Av~~al~Sgk~N~Yaps~G~~~ 107 (447)
T KOG0259|consen 28 WRFKGSDAAKKAASVTIRGILSALFDCCDPEKKKPILPLGHGDPSVYPCFRTSQEAEQAVVDALRSGKGNGYAPSVGILP 107 (447)
T ss_pred eeeccchhhhhhccccHHHHHHHHhhcCCcccCceeccCCCCCCCccccccCCHHHHHHHHHHHhcCCCCCcCCccccHH
Confidence 99999988888888999999987766554544568999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCccc
Q 014603 92 ARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEV 171 (422)
Q Consensus 92 lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 171 (422)
.|+++|+++.+......++++|++|+|.++|++.++.++.+||..||++.|+|+-|...+...|++++.+.+-|+.+|.+
T Consensus 108 AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAIe~~i~~LA~p~aNILlPrPGfp~Y~~~a~~~~lEVR~ydlLPe~~weI 187 (447)
T KOG0259|consen 108 ARRAVAEYLNRDLPNKLTADDVVLTSGCSQAIELAISSLANPGANILLPRPGFPLYDTRAIYSGLEVRYYDLLPEKDWEI 187 (447)
T ss_pred HHHHHHHHhhcCCCCccCcCceEEeccchHHHHHHHHHhcCCCCceecCCCCCchHHHhhhhcCceeEeecccCccccee
Confidence 99999999999888788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEe
Q 014603 172 DLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLG 251 (422)
Q Consensus 172 d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~ 251 (422)
|++.+|.+++++|.++++.||+||.|.+++.+-+++|+++|+++++.||.||+|..+.|++.++.++..+.....+++++
T Consensus 188 DL~~veal~DENT~AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiVPVitlg 267 (447)
T KOG0259|consen 188 DLDGVEALADENTVAIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIVPVITLG 267 (447)
T ss_pred chHHHHHhhccCeeEEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCccchhhccccCceEeec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998888899999
Q ss_pred cCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHH
Q 014603 252 SISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCD 331 (422)
Q Consensus 252 s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 331 (422)
|+||.|..||||+||++..|+.+++......+.++........|+++.|.|+-.+|+...++++.....-++.+.+...+
T Consensus 268 gisKrW~VPGWRlGWi~~hD~~gvf~~~~~~q~~~~~~~~~~~p~TiiQ~AlP~IL~kTp~efF~k~~~~lk~na~l~y~ 347 (447)
T KOG0259|consen 268 GISKRWIVPGWRLGWIALHDPRGVFRDTKVVQGIKNFLDIIPGPATIIQGALPDILEKTPEEFFDKKLSFLKSNADLCYS 347 (447)
T ss_pred ccccccccCCceeeeEEEecccccccchHHHHHHHHHHhccCCccHhHHHHhHHHHHhChHHHHHHHHHHHHhhHHHHHH
Confidence 99999999999999999999999997777778888888888899999999999999988899999999999999999999
Q ss_pred HhhcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEeccChHHHHHHHHHH
Q 014603 332 RLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALEDGLGRM 411 (422)
Q Consensus 332 ~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~l~~~~~~l 411 (422)
+|+++|++.+...|++.+|+|+.++...+....++.++...|+++..+.+.||..|+.++|+|++++++.+.+++++.||
T Consensus 348 ~Lk~IP~l~cp~kPeg~mylmv~l~~s~~~~~~dD~dFc~kL~~Eesv~~LPG~af~~~nw~Ri~i~~~~~~leea~~Ri 427 (447)
T KOG0259|consen 348 RLKDIPCLTCPVKPEGCMYLMVKLNLSLFPDIEDDVDFCQKLAREESVICLPGQAFGLKNWLRIVITVEEEMLEEAFSRI 427 (447)
T ss_pred HHhcCCCcccCcCCCcceEEEeccchhhhccccccHHHHHHHhhhcceEEeccccccCCCeEEEEEccChHHHHHHHHHH
Confidence 99999999988899999999999988777777789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcc
Q 014603 412 KAFYDRHAK 420 (422)
Q Consensus 412 ~~~~~~~~~ 420 (422)
+.+..+..+
T Consensus 428 k~Fc~RH~~ 436 (447)
T KOG0259|consen 428 KEFCDRHSK 436 (447)
T ss_pred HHHHHhhhh
Confidence 999877653
No 2
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=3.7e-61 Score=459.48 Aligned_cols=422 Identities=67% Similarity=1.192 Sum_probs=357.4
Q ss_pred CCCCCCCC-----CCCcCccccHH-HhhccCccHHHHHHHHHhhhhccC-CCCceeecCCCCCCCCCCCCcHHHHHHHHH
Q 014603 1 MENGGGAN-----GNQWGFKANEE-LKTASGITVRGVLNSLLENLNKND-TRPLIPLGHGDPSAFPSFRTASVAVDAIVH 73 (422)
Q Consensus 1 ~~~~~~~~-----~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~ 73 (422)
||||||-. ++.|.+..+.+ +.......+|..+..+........ +.++|+|++|+|+.++.+++++++.+++.+
T Consensus 1 ~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~P~~~~~~~~~~~~~~a~~~ 80 (430)
T PLN00145 1 MEGGGGGGGGGHATARWRFERANAALAAAGALSIRAVLNRVKACVDAGGGPRPVLPLGHGDPSAFPCFRTAPEAEDAVAA 80 (430)
T ss_pred CCCCCCCCCCCCccccccccCchhhHHHhcccchhhHHHHHHHhhhcccCCCCeeeCCCCCCCCCCCCCCCHHHHHHHHH
Confidence 99999985 57788988874 455555668887766666655543 789999999999987778999999999999
Q ss_pred HhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhh
Q 014603 74 SVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATH 153 (422)
Q Consensus 74 ~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~ 153 (422)
.+.....+.|++..|.+++|+++++++++.++.++++++|++|+|+++++..++.++.++||+|++++|+|+.|...+..
T Consensus 81 al~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~v~it~G~~~al~l~~~~l~~~Gd~Vlv~~P~y~~y~~~~~~ 160 (430)
T PLN00145 81 ALRSGKYNSYSTCVGLLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQAIEIIMSVLAQPGANILLPRPGYPLYEARAVF 160 (430)
T ss_pred HHHcCcCCCCCCCccCHHHHHHHHHHHhhccCCCCChhhEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHH
Confidence 88765566899988999999999999998888889999999999999999999999999999999999999999999999
Q ss_pred CCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCC
Q 014603 154 SHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNT 233 (422)
Q Consensus 154 ~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~ 233 (422)
.|.+++.+++.++++|.+|++.+++.++++++++++++|+||||.+++.+++++|+++|+++|++||+||+|..+.|++.
T Consensus 161 ~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~ 240 (430)
T PLN00145 161 SGLEVRHFDLLPERGWEVDLEGVEALADENTVAMVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSK 240 (430)
T ss_pred cCCEEEEeeCCcccCCcCCHHHHHHHhCcCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCC
Confidence 99999999887777889999999999888999999999999999999999999999999999999999999999888765
Q ss_pred CCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhhhccCcchHHHHHHHHHHhhchHH
Q 014603 234 PFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQGAVPQILEKTEEE 313 (422)
Q Consensus 234 ~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~ 313 (422)
...++..+...+++++++||||.|++||+|+||++++++..+....++...++........++.+.|.++..+|+...+.
T Consensus 241 ~~~~~~~~~~~~~vi~~~S~SK~~~~pG~RlG~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~a~~~~l~~~~~~ 320 (430)
T PLN00145 241 PFVPMGVFGEVAPVLTLGSISKRWVVPGWRLGWIATCDPNGILKETKVVDSIRNYLNISTDPATFVQGAIPQIIANTKEE 320 (430)
T ss_pred CccchhhhcccCcEEEEeccccccCCCCeeEEEEEEecchhhhhhhHHHHHHHHHhcccCCCCHHHHHHHHHHHhcCHHH
Confidence 55555555555689999999999999999999999865433221112334444444444456789999999999864568
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeE
Q 014603 314 FFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWL 393 (422)
Q Consensus 314 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~i 393 (422)
++++.++.++++++.+.+.|++++++.+...|++++|+|++++...+++..++.+++..+++++||.+.||..|+..+++
T Consensus 321 ~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~P~ga~y~~v~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~l 400 (430)
T PLN00145 321 FFTKTLGLLKETADICYEKIKEIKCITCPHKPEGSMFVMVKLDLSCLSGIKDDMDFCCKLAKEESVVVLPGSALGMKNWL 400 (430)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCCcCCCeeeEEEeccChhhcCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeE
Confidence 89999999999999999999998888744579999999999875322222256778888888999999999999989999
Q ss_pred EEEeccChHHHHHHHHHHHHHHHHhcccC
Q 014603 394 RITFAVEPSALEDGLGRMKAFYDRHAKKQ 422 (422)
Q Consensus 394 Ris~~~~~~~l~~~~~~l~~~~~~~~~~~ 422 (422)
||+++.+.+++++++++|.+++.++.+++
T Consensus 401 Ris~~~~~~~l~~al~rl~~~~~~~~~~~ 429 (430)
T PLN00145 401 RITFAIDPPSLEDGLERLKSFCLRHAKLA 429 (430)
T ss_pred EEEeCCCHHHHHHHHHHHHHHHHHhcccc
Confidence 99999989999999999999999987763
No 3
>PLN02187 rooty/superroot1
Probab=100.00 E-value=7.8e-59 Score=446.13 Aligned_cols=409 Identities=56% Similarity=1.043 Sum_probs=346.2
Q ss_pred CCcCccccHHHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCC
Q 014603 10 NQWGFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGI 89 (422)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~ 89 (422)
+.|.++.+..+.......||.+...+......+.++++|+|++|+|+..+.+.+++++.+++.+.+..+....|++..|.
T Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~ 110 (462)
T PLN02187 31 SVWRFGGSDKAAKASTVTLRGVIYMLFDNCGKDVNKTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRSGKGNSYGPGAGI 110 (462)
T ss_pred cccccCcchhhhhhhhchHhhHHHHHHhhcccCCCCCeEECCCCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCh
Confidence 44889999888888878999998878776666678999999999998767678889999999998876656689888999
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCc
Q 014603 90 LPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGW 169 (422)
Q Consensus 90 ~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 169 (422)
+++|+++|+++++.++.++++++|++|+|+++++..++++++++||+|++++|+|+.|...+...|.+++.+++.++++|
T Consensus 111 ~~lR~aiA~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~~l~~~~~~ 190 (462)
T PLN02187 111 LPARRAVADYMNRDLPHKLTPEDIFLTAGCNQGIEIVFESLARPNANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEW 190 (462)
T ss_pred HHHHHHHHHHHHHhcCCCCCcccEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCCccHHHHHHHcCCEEEEEeCccccCC
Confidence 99999999999988888899999999999999999999999999999999999999999999999999999998766778
Q ss_pred ccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEE
Q 014603 170 EVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLT 249 (422)
Q Consensus 170 ~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~ 249 (422)
.+|++.|++.++++++++++++|+||||.+++.+++++|+++|+++|++||+||+|..+.|++..+.++..+....++++
T Consensus 191 ~~d~~~l~~~~~~~~~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~~~~vi~ 270 (462)
T PLN02187 191 EIDLEGIEAIADENTVAMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLT 270 (462)
T ss_pred ccCHHHHHHhcCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHHhccCCcEEE
Confidence 99999999988888999999999999999999999999999999999999999999998887654445555544456999
Q ss_pred EecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhh---hccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHH
Q 014603 250 LGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN---ISSDPATFIQGAVPQILEKTEEEFFSKITDILRETA 326 (422)
Q Consensus 250 i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 326 (422)
++||||.|++||+|+||++++++..+. ++++.+..... ...+++.+.|.++.++|+...+.++++.++.+++++
T Consensus 271 l~SfSK~f~~pGlRiG~~v~~~p~~~~---~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~r 347 (462)
T PLN02187 271 LAGISKGWVVPGWKIGWIALNDPEGVF---ETTKVLQSIKQNLDVTPDPATIIQAALPAILEKADKNFFAKKNKILKHNV 347 (462)
T ss_pred EecchhhcCCccceeEEEEecCchhHH---HHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHH
Confidence 999999999999999999986432111 12334444432 222457899999999997544688999999999999
Q ss_pred HHHHHHhhcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEeccChHHHHH
Q 014603 327 DICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALED 406 (422)
Q Consensus 327 ~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~l~~ 406 (422)
+.+.+.|++++++.++..|++|+|+|++++.....+..++.+++..+++++||.+.||..|+..+++||+++.+++++++
T Consensus 348 ~~l~~~L~~~~~~~~~~~P~gg~fl~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~iRis~~~~~e~l~~ 427 (462)
T PLN02187 348 DLVCDRLKDIPCVVCPKKPESCTYLLTKLELSLMDNIKDDIDFCVKLAREENLVFLPGDALGLKNWMRITIGVEAHMLED 427 (462)
T ss_pred HHHHHHHhhCCCCcCCCCCCEeEEEEeecChhhCCCCCCHHHHHHHHHhhCCEEEECccccCCCCeEEEEeCCCHHHHHH
Confidence 99999999986554344688899999988642222222456777788888999999999998889999999998999999
Q ss_pred HHHHHHHHHHHhccc
Q 014603 407 GLGRMKAFYDRHAKK 421 (422)
Q Consensus 407 ~~~~l~~~~~~~~~~ 421 (422)
++++|.++++++.++
T Consensus 428 al~rL~~~l~~~~~~ 442 (462)
T PLN02187 428 ALERLKGFCTRHAKK 442 (462)
T ss_pred HHHHHHHHHHHhhhc
Confidence 999999999887765
No 4
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1e-58 Score=433.64 Aligned_cols=379 Identities=27% Similarity=0.470 Sum_probs=327.6
Q ss_pred ccCccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhh
Q 014603 23 ASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNR 102 (422)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~ 102 (422)
..++..........+........++|+|++|+|+ ++.|+.+++++.+.+.++.. .|.+..|+++||++|++++.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~vi~l~iG~Pd----~~~p~~i~~a~~~a~~~~~~-~Y~~~~G~~~LReaia~~~~~ 80 (393)
T COG0436 6 VLPSYTFAVLAEAKAAAELKGKEDVIDLSIGEPD----FPTPEHIIEAAIEALEEGGT-HYTPSAGIPELREAIAEKYKR 80 (393)
T ss_pred cCcchhHHHHhHHHHHHHhcCCCCEEEeCCCCCC----CCCCHHHHHHHHHHHhcccC-CCCCCCCCHHHHHHHHHHHHH
Confidence 3344455555422222222222689999999976 78999999999999887544 677999999999999999999
Q ss_pred cCCCCCCCCC-EEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCC-CCcccCHHHHHHhh
Q 014603 103 DLPYKLSPDD-VYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPA-KGWEVDLDAVEALA 180 (422)
Q Consensus 103 ~~~~~~~~~~-i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~~ 180 (422)
.++..+++++ |++|+|+++|+..++.+++.+||+|++++|.|..|....+..|.+++.+++... ++|.+|++.|++.+
T Consensus 81 ~~~~~~~~~~eiivt~Ga~~al~~~~~a~~~pGDeVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i 160 (393)
T COG0436 81 RYGLDVDPEEEIIVTAGAKEALFLAFLALLNPGDEVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAI 160 (393)
T ss_pred HhCCCCCCCCeEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhc
Confidence 9998888877 999999999999999999999999999999999999999999999999998655 48999999999999
Q ss_pred cCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCC-CCCeEEEecCccccCC
Q 014603 181 DENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IVPVLTLGSISKRWIV 259 (422)
Q Consensus 181 ~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~-~~~~i~i~s~sK~~~~ 259 (422)
+++++++++++||||||.+++++++++|+++|++||++||.||+|..+.|++..+.++..+.. .+++|.+.||||.|++
T Consensus 161 ~~ktk~i~ln~P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~m 240 (393)
T COG0436 161 TPKTKAIILNSPNNPTGAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYGM 240 (393)
T ss_pred CccceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcceEEEEecccccccc
Confidence 999999999999999999999999999999999999999999999999999864445555544 4689999999999999
Q ss_pred CCceeEEEEeeCCCCcccchhHHHHHHhhh-hhccCcchHHHHHHHHHHhhch-HHHHHHHHHHHHHHHHHHHHHhhcCC
Q 014603 260 PGWRLGWLVTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQGAVPQILEKTE-EEFFSKITDILRETADICCDRLKEIP 337 (422)
Q Consensus 260 ~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~ 337 (422)
+|||+||+++++ +++++.+.... ....+++.+.|.++.++|+... ...++..++.++++++.+.+.|.+++
T Consensus 241 tGwRvG~~v~~~-------~~l~~~~~~~~~~~~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~~~ 313 (393)
T COG0436 241 TGWRIGWVVGPP-------EELIAALRKLKSYLTSCAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNEIG 313 (393)
T ss_pred cccceeEeecCh-------HHHHHHHHHHHHhcccCCCHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999864 46778777555 3456889999999999999743 36778888999999999999999998
Q ss_pred CCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCC---CeEEEEeccChHHHHHHHHHHHHH
Q 014603 338 CITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLK---DWLRITFAVEPSALEDGLGRMKAF 414 (422)
Q Consensus 338 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~---~~iRis~~~~~~~l~~~~~~l~~~ 414 (422)
++.+...|.+++|+|+.++.. .++.+++.+|++++||.|.||..|+.. +++|+|++.+.+++++++++|.++
T Consensus 314 g~~~~~~p~Ga~Y~~~~i~~~-----~d~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis~~~~~~~l~~a~~rl~~~ 388 (393)
T COG0436 314 GLSVVKPPEGAFYLFPKIPEL-----LDSEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRLSLATSEETLEEALRRLARF 388 (393)
T ss_pred CeeeccCCCeeEEEEeecCCC-----CCHHHHHHHHHHhCCEEEecccccCCCCCCCeEEEEEecCHHHHHHHHHHHHHH
Confidence 888564488999999999753 378999999999999999999999974 899999998889999999999999
Q ss_pred HHHh
Q 014603 415 YDRH 418 (422)
Q Consensus 415 ~~~~ 418 (422)
++.+
T Consensus 389 ~~~~ 392 (393)
T COG0436 389 LAEY 392 (393)
T ss_pred HHhc
Confidence 8764
No 5
>PLN02656 tyrosine transaminase
Probab=100.00 E-value=1.5e-56 Score=426.87 Aligned_cols=395 Identities=68% Similarity=1.185 Sum_probs=331.9
Q ss_pred HHHHHHHHHhhh-hccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCC
Q 014603 28 VRGVLNSLLENL-NKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPY 106 (422)
Q Consensus 28 ~~~~~~~~~~~~-~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~ 106 (422)
|+..+..++... ++.++.++|+|+.|+|+..+.+++++.+++++.+.+.......|++..|.+++|+++++++++.+|.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~ 92 (409)
T PLN02656 13 IKGILSLLMESIDDEENGKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSRDLPY 92 (409)
T ss_pred hhhHHHHHHHhccccccCCeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHhcCC
Confidence 666666665544 4557899999999998865557889999999999887655678999899999999999999988888
Q ss_pred CCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceE
Q 014603 107 KLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVA 186 (422)
Q Consensus 107 ~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~ 186 (422)
.+++++|++|+|+++++..++.+++++||+|++++|+|+.+...+...|++++.+++.+++++.+|++.+++.+++++++
T Consensus 93 ~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~ 172 (409)
T PLN02656 93 KLSLDDVFITSGCTQAIDVALSMLARPGANILLPRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDAVEALADQNTVA 172 (409)
T ss_pred CCCcccEEEeCChHHHHHHHHHHHhCCCCeEEEeCCCCCcHHHHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhccCceE
Confidence 89999999999999999999999999999999999999999888888999999999866667889999999988888999
Q ss_pred EEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEE
Q 014603 187 LVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGW 266 (422)
Q Consensus 187 i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~ 266 (422)
+++++|+||||.+++.+++++|+++|+++|++||+||+|..+.|++....++..++..+++++++||||.|++||+|+||
T Consensus 173 v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRiG~ 252 (409)
T PLN02656 173 LVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIVPGWRLGW 252 (409)
T ss_pred EEEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhcccCcEEEEcccchhccCcceeEEE
Confidence 99999999999999999999999999999999999999999888765444544455556799999999999999999999
Q ss_pred EEeeCCCCcccchhHHHHHHhhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC
Q 014603 267 LVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPE 346 (422)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~ 346 (422)
++++++..+...+++++++........+++.+.|.++..+|++..+.++++.++.++++++.+.+.|++++++..+..|+
T Consensus 253 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~~p~ 332 (409)
T PLN02656 253 FVTTDPSGSFRDPKIVERIKKYFDILGGPATFIQAAVPTILEQTDESFFKKTINILKQSSDICCDRIKEIPCITCPHKPE 332 (409)
T ss_pred EEEeCcccccccHHHHHHHHHHHhhhcCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCcCCC
Confidence 99864322211146777777665444467889999999999754467899999999999999999999886544234789
Q ss_pred CceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEeccChHHHHHHHHHHHHHHHHhcccC
Q 014603 347 GSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALEDGLGRMKAFYDRHAKKQ 422 (422)
Q Consensus 347 ~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~l~~~~~~l~~~~~~~~~~~ 422 (422)
+|+|+|++++.....+..++.+++..+++++||.+.||..|+.++++||+++.+++++++++++|++++.++..+|
T Consensus 333 gg~~~w~~l~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~fg~~~~iRi~~~~~~e~l~eal~rl~~~~~~~~~~~ 408 (409)
T PLN02656 333 GSMAVMVKLNLSLLEDISDDIDFCFKLAREESVIILPGTAVGLKNWLRITFAADPSSLEEALGRIKSFYLRHSKTQ 408 (409)
T ss_pred eEEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEecchhcCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhcccc
Confidence 9999999986422111123456666777888999999999988899999999989999999999999998887654
No 6
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=1.2e-55 Score=420.40 Aligned_cols=394 Identities=69% Similarity=1.163 Sum_probs=324.7
Q ss_pred HHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCC
Q 014603 28 VRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYK 107 (422)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~ 107 (422)
|+.....++..+....++++|+|+.|+|+.+..+++++.+.+++.+.+.....+.|++..|.+++|+++++++.+.+|.+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~ 94 (409)
T PLN00143 15 IDDAVKFLKENFNEDDHRLAISFGFGDPSCFECFRTTNIAEDAIVEAVRSAKFNSYAPTGGILPARRAIADYLSNDLPYQ 94 (409)
T ss_pred HHHHHHHHHHhcccCCCCceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHhhcCCC
Confidence 55555455544555678999999999987555578999999999998876556689888999999999999999888888
Q ss_pred CCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEE
Q 014603 108 LSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVAL 187 (422)
Q Consensus 108 ~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i 187 (422)
+++++|++|+|+++++..++++++++||.|++++|+|+.+...++..|.+++.+++.+++++.+|++.|+++++++++++
T Consensus 95 ~~~~~I~it~G~~~al~~~~~~l~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~ 174 (409)
T PLN00143 95 LSPDDVYLTLGCKHAAEIIIKVLARPEANILLPRPGFPDVETYAIFHHLEIRHFDLLPEKGWEVDLDAVEAIADENTIAM 174 (409)
T ss_pred CCHhhEEEecChHHHHHHHHHHHcCCCCEEEEcCCCCcCHHHHHHHcCCEEEEEeccCCCCCcCCHHHHHHhcccCCEEE
Confidence 99999999999999999999999999999999999999999999999999999988656678899999999888889999
Q ss_pred EEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEE
Q 014603 188 VIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWL 267 (422)
Q Consensus 188 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~ 267 (422)
++++||||||.+++.+++++|+++|+++|++||+||+|..+.+++....++..+...+++++++||||.|++||+|+||+
T Consensus 175 ~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRvG~~ 254 (409)
T PLN00143 175 VIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFASIVPVITLGSISKRWMIPGWGLGWL 254 (409)
T ss_pred EEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchhhhcccCcEEEEccchhhcCCCccceEEE
Confidence 99999999999999999999999999999999999999998887644344444555567999999999999999999999
Q ss_pred EeeCCCCcccchhHHHHHHhhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCC
Q 014603 268 VTSDPNGILQDSGIVDSIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEG 347 (422)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~ 347 (422)
+++++....+..+..+.+.........++.+.|.++..+|++..+.++++.+++++++++.+.+.|+++++..+...|.+
T Consensus 255 v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~p~g 334 (409)
T PLN00143 255 VTCDPSGLLQICEIADSIKKALNPAPFPPTFIQAAIPEILEKTTEDFFSKTINILRAALAFCYDKLKEIPCIMCPQKAEG 334 (409)
T ss_pred EeeCchhhhhhHHHHHHHHHHHhccCCCCchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCe
Confidence 98643221111122344444333233457789999999997544678899999999999999999998855442346889
Q ss_pred ceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEeccChHHHHHHHHHHHHHHHHhccc
Q 014603 348 SMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALEDGLGRMKAFYDRHAKK 421 (422)
Q Consensus 348 g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~l~~~~~~l~~~~~~~~~~ 421 (422)
|+|+|++++.....+..++.+++..+++++||.+.||..|+..+++||+++.+++++++++++|+++++++.++
T Consensus 335 g~f~w~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRi~~~~~~~~l~~al~rl~~~l~~~~~~ 408 (409)
T PLN00143 335 AFFALVKLNLLLLEDIEDDMEFCLKLAKEESLIILPGVTVGLKNWLRITFAVEQSSLEDGLGRLKSFCGRHAKK 408 (409)
T ss_pred eEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEEcCCHHHHHHHHHHHHHHHHHhccC
Confidence 99999999742111122466777778888899999999998889999999988999999999999999887654
No 7
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=100.00 E-value=3.4e-53 Score=404.49 Aligned_cols=402 Identities=34% Similarity=0.602 Sum_probs=326.1
Q ss_pred cCccccHHHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHH
Q 014603 12 WGFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILP 91 (422)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~ 91 (422)
|....+.|+.+.. ..++.+...+... .++.++|+|+.|.|+..+.+.+++.+.+++.+.+.......|++..|.++
T Consensus 4 ~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~~~~~~Y~~~~G~~~ 79 (412)
T PTZ00433 4 WDVSMSKHAGRVF-NPLRTVTDNAKPS---PSPKSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDSQECNGYPPTVGSPE 79 (412)
T ss_pred ccccccHHHHhhh-ccHHHHHHhhccC---CCCCCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhcCCCCCCCCCCCcHH
Confidence 4455555555543 3344444334322 36889999999998744445678999999998877544568999889999
Q ss_pred HHHHHHHHHhhcC------CCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccC
Q 014603 92 ARRAIADYLNRDL------PYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLP 165 (422)
Q Consensus 92 lr~~ia~~l~~~~------~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~ 165 (422)
||+++++++++.+ +..+++++|++|+|+++++..++.+++++||+|+++.|+|..+...++..|++++.+++++
T Consensus 80 Lr~aia~~~~~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~ 159 (412)
T PTZ00433 80 AREAVATYWRNSFVHKESLKSTIKKDNVVLCSGVSHAILMALTALCDEGDNILVPAPGFPHYETVCKAYGIEMRFYNCRP 159 (412)
T ss_pred HHHHHHHHHHhhccccccccCCCChhhEEEeCChHHHHHHHHHHhcCCCCEEEEccCCcccHHHHHHHcCCEEEEEecCc
Confidence 9999999998743 4568899999999999999999999999999999999999999999999999999999876
Q ss_pred CCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCC
Q 014603 166 AKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIV 245 (422)
Q Consensus 166 ~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~ 245 (422)
++++++|++.+++.++++++++++++|+||||.+++.+++++|+++|+++|++||+||+|..+.+++....++..+....
T Consensus 160 ~~~~~~d~~~l~~~~~~~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~ 239 (412)
T PTZ00433 160 EKDWEADLDEIRRLVDDRTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTSVADFDTTV 239 (412)
T ss_pred cccCcCCHHHHHHHhccCceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCCCccchhhccCCC
Confidence 66788999999998888899999999999999999999999999999999999999999999888664434444554444
Q ss_pred CeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHH
Q 014603 246 PVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRET 325 (422)
Q Consensus 246 ~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 325 (422)
++++++||||.|++||+|+||++++++.... +++++.+........+++.+.|.++..++.+..+.++++.++.++++
T Consensus 240 ~~i~~~SfSK~~~~pGlRlG~~i~~~p~~~~--~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~ 317 (412)
T PTZ00433 240 PRVILGGTAKNLVVPGWRLGWLLLVDPHGNG--GDFLDGMKRLGMLVCGPCSVVQAALGEALLNTPQEHLEQIVAKLEEG 317 (412)
T ss_pred ceEEEccchhhcCCCCeeEEEEEEeCCcccH--HHHHHHHHHHhhccCCCChHHHHHHHHHHhcCcHHHHHHHHHHHHHH
Confidence 6899999999999999999999974332111 34666666654433467889999999998754468899999999999
Q ss_pred HHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEeccChHHHH
Q 014603 326 ADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALE 405 (422)
Q Consensus 326 ~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~l~ 405 (422)
++.+.+.|+++.++. +..|++|+|+|++++.....+..++.+++..+++++||.+.||..|+..+++||+++.++++++
T Consensus 318 r~~l~~~L~~~~~~~-~~~p~gg~f~~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRis~~~~~e~l~ 396 (412)
T PTZ00433 318 AMVLYNHIGECIGLS-PTMPRGSMFLMSRLDLEKFRDIKSDVEFYEKLLEEENVQVLPGEIFHMPGFTRLTISRPVEVLR 396 (412)
T ss_pred HHHHHHHHhcCCCCc-ccCCCeeEEEEEEechhhcCCCCCHHHHHHHHHHhcCEEEeCccccCCCCeEEEEecCCHHHHH
Confidence 999999999876666 5578899999999874211111245678888877789999999999888999999998889999
Q ss_pred HHHHHHHHHHHHhcc
Q 014603 406 DGLGRMKAFYDRHAK 420 (422)
Q Consensus 406 ~~~~~l~~~~~~~~~ 420 (422)
+++++|.++++.+++
T Consensus 397 ~al~~l~~~~~~~~~ 411 (412)
T PTZ00433 397 EAVERIKAFCERHKK 411 (412)
T ss_pred HHHHHHHHHHHHhcc
Confidence 999999999987654
No 8
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=100.00 E-value=6.6e-53 Score=401.94 Aligned_cols=400 Identities=38% Similarity=0.744 Sum_probs=326.6
Q ss_pred cCccccHHHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHH
Q 014603 12 WGFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILP 91 (422)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~ 91 (422)
|+++.+++.++-.+. ++.+....+.+. +.+.++++|+.|.|.....+++++.+.+++.+.+.......|.+..|.++
T Consensus 1 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~ 77 (401)
T TIGR01264 1 WSVKPSDHSKNTVNP-IRAIVDNMKVKP--NPEKPMIKLSIGDPTVFGNLPTDPEVMQAMKDSLDSGKYNGYAPTVGALS 77 (401)
T ss_pred CCcChHHHHhhhhhH-HHHHHHHHHhhh--hcCCCeeecCCCCCCCcCCCCCCHHHHHHHHHHHhccCCCCCCCCCCCHH
Confidence 777788776665544 777776555432 23578899999998633346788999999998877654567988899999
Q ss_pred HHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCccc
Q 014603 92 ARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEV 171 (422)
Q Consensus 92 lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 171 (422)
+|+++++++.+. +..+++++|++|+|+++++..++.+++++||+|++++|+|..+...++..|.+++.++++.++++++
T Consensus 78 lr~aia~~~~~~-~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~v~i~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~~~ 156 (401)
T TIGR01264 78 AREAIASYYHNP-DGPIEADDVVLCSGCSHAIEMCIAALANAGQNILVPRPGFPLYETLAESMGIEVKLYNLLPDKSWEI 156 (401)
T ss_pred HHHHHHHHHhhc-CCCCCHHHEEECcChHHHHHHHHHHhCCCCCEEEEeCCCChhHHHHHHHcCCEEEEeecCCccCCCC
Confidence 999999999863 4468889999999999999999999999999999999999999999999999999998866667889
Q ss_pred CHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEe
Q 014603 172 DLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLG 251 (422)
Q Consensus 172 d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~ 251 (422)
|++.+++.++++++++++++|+||||.+++.+++++|+++|+++|++||+||+|..+.+++....++..+....++++++
T Consensus 157 d~~~l~~~~~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~ 236 (401)
T TIGR01264 157 DLKQLESLIDEKTAALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLASLSSTVPILSCG 236 (401)
T ss_pred CHHHHHHHhccCceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHHHcCCCCcEEEEc
Confidence 99999998887889999999999999999999999999999999999999999999888765444555554444689999
Q ss_pred cCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHH
Q 014603 252 SISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCD 331 (422)
Q Consensus 252 s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 331 (422)
||||.|+++|+|+||++++++.... .++++.+........+++.+.|.++..+|.+..+.++++.++.++++++.+.+
T Consensus 237 SfSK~~~~~GlRiG~iv~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~l~~~~~~~~~~r~~l~~ 314 (401)
T TIGR01264 237 GLAKRWLVPGWRLGWIIIHDRRGIL--RDIRDGLVKLSQRILGPCTIVQGALPSILLRTPQEYFDGTLSVLESNAMLCYG 314 (401)
T ss_pred cCcccCCCccceEEEEEecCcchhH--HHHHHHHHHHhhccCCCCcHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999987432111 23445454443323466789999999999754468899999999999999999
Q ss_pred HhhcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEeccChHHHHHHHHHH
Q 014603 332 RLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALEDGLGRM 411 (422)
Q Consensus 332 ~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~l~~~~~~l 411 (422)
.|++++++. +..|.+|+|+|++++....++..++.+++..+++++||.+.||..|+..+++||+++.+++++++++++|
T Consensus 315 ~L~~~~~~~-~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gI~v~pg~~f~~~~~iRis~~~~~~~l~~~l~rl 393 (401)
T TIGR01264 315 ALAAVPGLR-PVMPSGAMYMMVGIEMEHFPEFKNDVEFTERLVAEQSVFCLPGSCFEYPGFFRVVLTVPVVMMEEACSRI 393 (401)
T ss_pred HHHhCCCCc-ccCCCeeeEEEEEecccccCCCCCHHHHHHHHHHhCCEEEeCchhcCCCCeEEEEEcCCHHHHHHHHHHH
Confidence 999987776 4579999999999864211122246677787777889999999999878999999998889999999999
Q ss_pred HHHHHHh
Q 014603 412 KAFYDRH 418 (422)
Q Consensus 412 ~~~~~~~ 418 (422)
.++++++
T Consensus 394 ~~~~~~~ 400 (401)
T TIGR01264 394 QEFCERH 400 (401)
T ss_pred HHHHhcc
Confidence 9988653
No 9
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=100.00 E-value=1.3e-52 Score=399.68 Aligned_cols=402 Identities=53% Similarity=0.976 Sum_probs=332.0
Q ss_pred cCccccHHHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHH
Q 014603 12 WGFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILP 91 (422)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~ 91 (422)
|.++.+++.+.- ...|+.+++.+.+.. ..+.++|+|+.|+|...+.+++++.+.+++.+.+.......|++..|.++
T Consensus 1 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~~~Y~~~~g~~~ 77 (403)
T TIGR01265 1 WNFKGSDHAKKT-VNPIRAIVDNLKVKP--NPEKPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKFNGYAPSVGALA 77 (403)
T ss_pred CCCchHHHHHHH-HHHHHHHHHHHHHHH--hcCCCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHH
Confidence 556667655543 356778776665542 23688999999998755668889999999999887655568988899999
Q ss_pred HHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCccc
Q 014603 92 ARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEV 171 (422)
Q Consensus 92 lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 171 (422)
+|++++++++...+..+++++|++|+|+++++..++++++++||+|++++|+|..+...+...|.+++.+++.+.+++.+
T Consensus 78 lr~~ia~~l~~~~~~~~~~~~ii~t~G~t~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~ 157 (403)
T TIGR01265 78 AREAVAEYLSSDLPGKLTADDVVLTSGCSQAIEICIEALANPGANILVPRPGFPLYDTRAAFSGLEVRLYDLLPEKDWEI 157 (403)
T ss_pred HHHHHHHHHHhhcCCCCCHHHEEEecChHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEecCCcccCCcc
Confidence 99999999998777778899999999999999999999999999999999999999999999999999888866566789
Q ss_pred CHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEe
Q 014603 172 DLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLG 251 (422)
Q Consensus 172 d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~ 251 (422)
|++.+++.+.++++++++++|+||||.+++.+++++|+++|+++|+++|+|++|..+.+++....++..+....++++++
T Consensus 158 d~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~ 237 (403)
T TIGR01265 158 DLDGLEALADEKTVAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMASFASIVPVLSLG 237 (403)
T ss_pred CHHHHHHHhCcCccEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccchhhhccCCcEEEEe
Confidence 99999998888899999999999999999999999999999999999999999999888765444555565555799999
Q ss_pred cCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHH
Q 014603 252 SISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCD 331 (422)
Q Consensus 252 s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 331 (422)
||||.|++||+|+||++++++...+. +++.+.+.........++.+.|.++..+|++..+.++++.+++++++++.+.+
T Consensus 238 S~SK~~~~pGlRiG~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 316 (403)
T TIGR01265 238 GISKRWVVPGWRLGWIIIHDPHGIFR-DTVLQGLKNLLQRILGPATIVQGALPDILENTPQEFFDGKISVLKSNAELCYE 316 (403)
T ss_pred ecccccCCCcceEEEEEEeCchhhhH-HHHHHHHHHHhhhhcCCChHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999865321110 12444454444333467889999999999764568899999999999999999
Q ss_pred HhhcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEeccChHHHHHHHHHH
Q 014603 332 RLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALEDGLGRM 411 (422)
Q Consensus 332 ~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~l~~~~~~l 411 (422)
.|+.++++. +..|.+|+|+|++++.....+..++.+++..+++++||.+.||..|+..+++||+++.+++++++++++|
T Consensus 317 ~L~~~~~~~-~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~iRis~~~~~~~l~~~l~~l 395 (403)
T TIGR01265 317 ELKDIPGLV-CPKPEGAMYLMVKLELELFPEIKDDVDFCEKLVREESVICLPGSAFGLPNWVRITITVPESMLEEACSRI 395 (403)
T ss_pred HHhcCCCce-ecCCCceeEEEEeccccccCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEecCCHHHHHHHHHHH
Confidence 999987776 4478999999999975321111246777788778889999999999888999999998889999999999
Q ss_pred HHHHHHh
Q 014603 412 KAFYDRH 418 (422)
Q Consensus 412 ~~~~~~~ 418 (422)
.+++.++
T Consensus 396 ~~~~~~~ 402 (403)
T TIGR01265 396 KEFCERH 402 (403)
T ss_pred HHHHHhc
Confidence 9988654
No 10
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=100.00 E-value=7.1e-53 Score=412.13 Aligned_cols=398 Identities=23% Similarity=0.447 Sum_probs=322.8
Q ss_pred cCccccHHHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHH
Q 014603 12 WGFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILP 91 (422)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~ 91 (422)
|.++++.|+.....+.++.+...+.+. +..|.++|+|+.|+|..+ ++++|+.+.+++.+.+.. ...|++..|.++
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~g~~~i~l~~G~p~~~-~~~~p~~~~~~~~~~~~~--~~~Y~~~~G~~~ 189 (517)
T PRK13355 115 RTFKKSHKLDNVLYDVRGPVVDEANRM--EAAGTHILKLNIGNPAPF-GFRTPDEVVYDMAQQLTD--TEGYSDSKGLFS 189 (517)
T ss_pred cCCChhHHhhccCccHHHHHHHHHHHH--HHcCCCeEEecCcCCCcC-CCCCCHHHHHHHHHHhhc--CCCCCCCcChHH
Confidence 567789999999988776666544433 235889999999998642 367789999999887754 357999999999
Q ss_pred HHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCccc
Q 014603 92 ARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEV 171 (422)
Q Consensus 92 lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 171 (422)
||++|++++.+..+.++++++|++|+|+++++..++.+++++||+|+++.|+|+.|...++..|.+++.++.+++++|.+
T Consensus 190 lReaia~~~~~~~~~~~~~~~I~it~G~~eal~~~~~~l~~~Gd~Vli~~P~y~~y~~~~~~~g~~~v~~~~~~~~~~~~ 269 (517)
T PRK13355 190 ARKAIMQYAQLKGLPNVDVDDIYTGNGVSELINLSMSALLDDGDEVLIPSPDYPLWTACVNLAGGTAVHYRCDEQSEWYP 269 (517)
T ss_pred HHHHHHHHHHhcCCCCCChhHEEEeCcHHHHHHHHHHHhCCCCCEEEEcCCCCcCHHHHHHHCCCEEEEeecCcccCCCC
Confidence 99999999987766568899999999999999999999999999999999999999999999999999999877777899
Q ss_pred CHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEe
Q 014603 172 DLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLG 251 (422)
Q Consensus 172 d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~ 251 (422)
|++.+++.++++++++++++|+||||.+++.+++++|+++|++||++||+||+|..+.|++....++..+..+..+++++
T Consensus 270 d~~~l~~~~~~~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~~~~~~~vi~~~ 349 (517)
T PRK13355 270 DIDDIRSKITSRTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIASLAPDLFCVTFS 349 (517)
T ss_pred CHHHHHHhcCcCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccHHHhCCCCeEEEEe
Confidence 99999999988999999999999999999999999999999999999999999999988765545555554443477889
Q ss_pred cCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhhhccCcchHHHHHHHHHHhhch--HHHHHHHHHHHHHHHHHH
Q 014603 252 SISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQGAVPQILEKTE--EEFFSKITDILRETADIC 329 (422)
Q Consensus 252 s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~~l 329 (422)
||||.|+++|+|+||++++.+..+. +++++.+........+.+.++|.++..+|.... ..++.+. .++.++++.+
T Consensus 350 S~SK~~~~~G~RiG~~i~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~q~a~~~aL~~~~~~~~~~~~~-~~~~~~r~~l 426 (517)
T PRK13355 350 GLSKSHMIAGYRIGWMILSGNKRIA--KDYIEGLNMLANMRLCSNVPAQSIVQTALGGHQSVKDYLVPG-GRVYEQRELV 426 (517)
T ss_pred cchhhccCcccceEEEEeeCchhhH--HHHHHHHHHHhcCcCCcChHHHHHHHHHhcCCccHHHHHHHH-HHHHHHHHHH
Confidence 9999999999999999975322111 123444433333334677889999999996421 3455554 3445668999
Q ss_pred HHHhhcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEeccChHHHHHH
Q 014603 330 CDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAVEPSALEDG 407 (422)
Q Consensus 330 ~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRis~~~~~~~l~~~ 407 (422)
.+.|+++|++. +..|.+++|+|++++..... ..++.+++..+++++||.|.||..|+. ++++||+++.++++|+++
T Consensus 427 ~~~L~~~~g~~-~~~p~g~fy~~~~l~~~~~~-~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~Ris~~~~~~~l~~a 504 (517)
T PRK13355 427 YNALNAIPGIS-AVKPKAAFYIFPKIDVKKFN-IHDDEQFALDLLHDKKVLIVQGTGFNWDKPDHFRVVYLPRLEDLEDA 504 (517)
T ss_pred HHHHhcCCCcc-cCCCCeeeEEEeecCcccCC-CCCHHHHHHHHHHhCCEEEeCcchhCCCCcCEEEEEeCCCHHHHHHH
Confidence 99999988888 55899999999888642111 124567777888889999999999863 689999999899999999
Q ss_pred HHHHHHHHHHhc
Q 014603 408 LGRMKAFYDRHA 419 (422)
Q Consensus 408 ~~~l~~~~~~~~ 419 (422)
+++|.+++..++
T Consensus 505 ~~rl~~~~~~~~ 516 (517)
T PRK13355 505 MDRLADFFSYYR 516 (517)
T ss_pred HHHHHHHHHHhh
Confidence 999999998764
No 11
>PLN00175 aminotransferase family protein; Provisional
Probab=100.00 E-value=6.5e-52 Score=394.55 Aligned_cols=376 Identities=26% Similarity=0.433 Sum_probs=319.9
Q ss_pred CccccHHHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHH
Q 014603 13 GFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPA 92 (422)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l 92 (422)
.+.++.|+.....+.++.+.... .+.++|+|+.|.|. +++++.+.+++.+.+.+. ...|++..|.++|
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~i~l~~G~P~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~L 96 (413)
T PLN00175 29 PLQVAKRLEKFKTTIFTQMSSLA-------IKHGAINLGQGFPN----FDGPDFVKEAAIQAIRDG-KNQYARGFGVPEL 96 (413)
T ss_pred ccchhHHhhcCCCCHHHHHHHHh-------hcCCeEecCCCCCC----CCCCHHHHHHHHHHHhcC-CCCcCCCCCCHHH
Confidence 36678899888888887766543 34579999999976 567889999999888763 4689999999999
Q ss_pred HHHHHHHHhhcCCCCCCCC-CEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCccc
Q 014603 93 RRAIADYLNRDLPYKLSPD-DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEV 171 (422)
Q Consensus 93 r~~ia~~l~~~~~~~~~~~-~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 171 (422)
|+++++++++.+|+.++++ +|++|+|+++++..++.+++++||+|++++|+|..+...++..|.+++.++++++ ++.+
T Consensus 97 r~aia~~~~~~~g~~~~~~~~I~vt~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~-~~~~ 175 (413)
T PLN00175 97 NSAIAERFKKDTGLVVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKTVTLRPP-DFAV 175 (413)
T ss_pred HHHHHHHHHHHhCCCCCCCCCEEEeCCHHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEEECCcc-cCCC
Confidence 9999999998888888887 7999999999999999999999999999999999999999999999999998653 3789
Q ss_pred CHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCC-CCCeEEE
Q 014603 172 DLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IVPVLTL 250 (422)
Q Consensus 172 d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~-~~~~i~i 250 (422)
|++.|++.+.++++++++++|+||||.+++.+++++|+++|+++|++||+||+|..+.|++. ..++..+.. .++++++
T Consensus 176 ~~~~l~~~~~~~~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~-~~s~~~~~~~~~~vi~i 254 (413)
T PLN00175 176 PEDELKAAFTSKTRAILINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEGD-HISMASLPGMYERTVTM 254 (413)
T ss_pred CHHHHHHhcCcCceEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCCc-ccChhhCCCCcCcEEEE
Confidence 99999999888899999999999999999999999999999999999999999999888653 224444432 4679999
Q ss_pred ecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhh-hccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHH
Q 014603 251 GSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADIC 329 (422)
Q Consensus 251 ~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l 329 (422)
+||||.|+++|+|+||++++ +++++.+..... ...+++.+.|.++..+|+.. +.++++.++.++++++.+
T Consensus 255 ~SfSK~~~~~G~RiG~~v~~--------~~l~~~l~~~~~~~~~~~s~~~Q~a~~~~l~~~-~~~~~~~~~~~~~~~~~l 325 (413)
T PLN00175 255 NSLGKTFSLTGWKIGWAIAP--------PHLTWGVRQAHSFLTFATATPMQWAAVAALRAP-ESYYEELKRDYSAKKDIL 325 (413)
T ss_pred ecchhhccCcchheeeeEeC--------HHHHHHHHHHHhhccCCCCHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHH
Confidence 99999999999999999986 467888877654 34577889999999999753 578899999999999999
Q ss_pred HHHhhcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC-----CCeEEEEeccChHHH
Q 014603 330 CDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL-----KDWLRITFAVEPSAL 404 (422)
Q Consensus 330 ~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~-----~~~iRis~~~~~~~l 404 (422)
.+.|+++ ++. +..|.+++|+|++++.. +..++.+++..+++++||.+.||..|+. .+++||+++.+++++
T Consensus 326 ~~~L~~~-g~~-~~~p~g~~f~~~~~~~~---~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~~~~~e~l 400 (413)
T PLN00175 326 VEGLKEV-GFK-VYPSSGTYFVMVDHTPF---GFENDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAFCKDEETL 400 (413)
T ss_pred HHHHHHC-CCe-ecCCCeeEEEEEecccc---CCCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEEcCCHHHH
Confidence 9999997 676 44788899999987421 1114677888888888999999988742 469999999889999
Q ss_pred HHHHHHHHHHHH
Q 014603 405 EDGLGRMKAFYD 416 (422)
Q Consensus 405 ~~~~~~l~~~~~ 416 (422)
++++++|.++++
T Consensus 401 ~~~~~rL~~~~~ 412 (413)
T PLN00175 401 RAAVERMKTKLK 412 (413)
T ss_pred HHHHHHHHHHHh
Confidence 999999998875
No 12
>PRK06855 aminotransferase; Validated
Probab=100.00 E-value=3.7e-51 Score=391.72 Aligned_cols=387 Identities=22% Similarity=0.369 Sum_probs=307.6
Q ss_pred HHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCC
Q 014603 28 VRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYK 107 (422)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~ 107 (422)
++.+.....+. +..+.++++|+.|+|..+ .+++|+.+.+++.+.+.......|.+..|.+++|+++++++.+.+|+.
T Consensus 17 ~~~~~~~~~~~--~~~g~~~~~~~~G~p~~~-~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~ 93 (433)
T PRK06855 17 IRNIVAVAKKL--EKLGVKITWENIGDPIAK-GEKIPDWMKEIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQ 93 (433)
T ss_pred HHHHHHHHHHH--HhccccccccccCCCccc-CCCCCHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHhccCCC
Confidence 45544433322 234678999999998531 368889999999988765555689999999999999999999988888
Q ss_pred CCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHH-hhCCCeEEEeeccCCCCcccCHHHHHHhhc--CCc
Q 014603 108 LSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARA-THSHLEVRHFDLLPAKGWEVDLDAVEALAD--ENT 184 (422)
Q Consensus 108 ~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~--~~~ 184 (422)
+++++|++|+|+++++..++. ++.+||.|++++|+|+.+.... ...|..++.++++++++|.+|++.|++.++ +++
T Consensus 94 ~~~~~I~it~G~~~al~~~~~-l~~~Gd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~ 172 (433)
T PRK06855 94 ITPDDIIFFNGLGDAIAKIYG-LLRREARVIGPSPAYSTHSSAEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKYNPSI 172 (433)
T ss_pred CCHhHEEEcCcHHHHHHHHHH-hcCCCCeEEEeCCCCchHHHHHHHhcCCeEEEEecccccCCCCCHHHHHHHHhcCCCc
Confidence 999999999999999999985 7889999999999999876543 345888888888766778899999999886 357
Q ss_pred eEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCcee
Q 014603 185 VALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRL 264 (422)
Q Consensus 185 ~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~ 264 (422)
+++++++|+||||.++|.+++++|+++|+++|++||+||+|..+.|++..+.++..+..+.++++++||||.|++||+|+
T Consensus 173 ~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~~pGlRi 252 (433)
T PRK06855 173 AGILLINPDNPTGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGDVPGIALKGISKELPWPGSRC 252 (433)
T ss_pred eEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcCcCCeEEEecCccccCCCcceE
Confidence 88999999999999999999999999999999999999999999887654555555544446799999999998999999
Q ss_pred EEEEeeCCCCcccchhHHHHHHhhhhhccCcchHHHHHHHHHHhhch-HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCC
Q 014603 265 GWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQGAVPQILEKTE-EEFFSKITDILRETADICCDRLKEIPCITCPK 343 (422)
Q Consensus 265 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 343 (422)
||++++++........+++.+........+++.+.|.++.+++++.. +.++++.++.++++++.+.+.|++++++. +.
T Consensus 253 G~ii~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~-~~ 331 (433)
T PRK06855 253 GWIEVYNADKDEVFKKYINSILNAKMIEVCSTTLPQMAIPRIMSHPEYKNYLKERNKRYEKRSNIAYEKLKDVPGLK-VN 331 (433)
T ss_pred EEEEEeCCchhhHHHHHHHHHHHhhccccCCChHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCee-cc
Confidence 99998532100000123333333332234567899999999998643 67899999999999999999999887776 55
Q ss_pred CCCCceEEEEecCcccc---------------------cC-CCCHHHHHHHHHHhcCeEEecCCCCCC-CCeEEEEec-c
Q 014603 344 KPEGSMFVMVKLNYSLL---------------------EG-INSDMEFALKLAKEESVIVLPGITVGL-KDWLRITFA-V 399 (422)
Q Consensus 344 ~~~~g~~~~~~~~~~~~---------------------~~-~~~~~~~~~~l~~~~gi~v~~g~~~~~-~~~iRis~~-~ 399 (422)
.|.+|+|+|++++.... .+ ..++.+++..++++.||.+.||..|+. .+++|||++ .
T Consensus 332 ~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~~~~~~~Rls~~~~ 411 (433)
T PRK06855 332 RTNGAFYMTVVFEDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFCTELNGFRVTLLER 411 (433)
T ss_pred CCCeeEEEeeccccccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCCCCCCceEEEECCC
Confidence 78999999999985310 00 013566777788889999999999965 357999999 5
Q ss_pred ChHHHHHHHHHHHHHHHHhc
Q 014603 400 EPSALEDGLGRMKAFYDRHA 419 (422)
Q Consensus 400 ~~~~l~~~~~~l~~~~~~~~ 419 (422)
++++|++++++|.++++++-
T Consensus 412 ~~~~i~~~~~~l~~~~~~~~ 431 (433)
T PRK06855 412 DEEKFEWIYQTLAEKIEEYL 431 (433)
T ss_pred cHHHHHHHHHHHHHHHHHHh
Confidence 89999999999999998753
No 13
>PRK06207 aspartate aminotransferase; Provisional
Probab=100.00 E-value=4e-51 Score=388.77 Aligned_cols=359 Identities=21% Similarity=0.296 Sum_probs=304.0
Q ss_pred CCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCC-CCEEEecCHHHH
Q 014603 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSP-DDVYLTLGCTQA 122 (422)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~-~~i~~~~g~~~a 122 (422)
+.+.|+|++|.|.. +++++.+.+++.+.+.......|++..|.+++|++|++++.+.+|..+++ ++|++|+|++++
T Consensus 38 ~~~~i~l~~g~~~~---~~p~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~a 114 (405)
T PRK06207 38 PGRPVDFSHGDVDA---HEPTPGAFELFSAGVERGGVQAYTEYRGDADIRELLAARLAAFTGAPVDAADELIITPGTQGA 114 (405)
T ss_pred CCCceecCCcCCCC---CCCCHHHHHHHHHHHhcCCCccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHH
Confidence 66789999999762 35667888888888766545689988999999999999999888877888 899999999999
Q ss_pred HHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeecc---CCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccc
Q 014603 123 IEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLL---PAKGWEVDLDAVEALADENTVALVIINPGNPCGNV 199 (422)
Q Consensus 123 ~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~ 199 (422)
+..++++++++||+|++++|+|+.+...++..|.+++.++++ +++++++|++.|++.++++++++++++|+||||.+
T Consensus 115 l~~~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~P~NPTG~~ 194 (405)
T PRK06207 115 LFLAVAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFKAGVRVFLFSNPNNPAGVV 194 (405)
T ss_pred HHHHHHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeccccCcccCCCcCHHHHHHhhhhcCeEEEECCCCCCCCcC
Confidence 999999999999999999999999999999999999988875 23467899999999888889999999999999999
Q ss_pred cCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccC-CCCCeEEEecCccccCCCCceeEEEEeeCCCCcccc
Q 014603 200 YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG-SIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQD 278 (422)
Q Consensus 200 ~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~-~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~ 278 (422)
++.+++++|+++|+++|++||+||+|..+.|++....++..+. ..+++++++||||.|++||+|+||++++
T Consensus 195 ~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlRiG~ii~~-------- 266 (405)
T PRK06207 195 YSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGYRLGVAFGS-------- 266 (405)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhhccCcccceEEEEcC--------
Confidence 9999999999999999999999999999988765444444332 2368999999999999999999999986
Q ss_pred hhHHHHHHhhhhh-ccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCc
Q 014603 279 SGIVDSIKSFLNI-SSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNY 357 (422)
Q Consensus 279 ~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~ 357 (422)
+++++++...... ..+.+.+.|.++..+|++. ..++++..+.++++++.+.+.|++++++. +..|++|+|+|++++.
T Consensus 267 ~~l~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~~~p~gg~fl~~~l~~ 344 (405)
T PRK06207 267 PAIIDRMEKLQAIVSLRAAGYSQAVLRTWFSEP-DGWMKDRIARHQAIRDDLLRVLRGVEGVF-VRAPQAGSYLFPRLPR 344 (405)
T ss_pred HHHHHHHHHHHhHhccCCCHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHhcCCCce-ecCCCeeEEEEEeCcc
Confidence 4688888776543 3356678899999999752 35677788888889999999999887777 5478889999999974
Q ss_pred ccccCCCCHHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEeccChHHHHHHHHHHHHHHHHhc
Q 014603 358 SLLEGINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAVEPSALEDGLGRMKAFYDRHA 419 (422)
Q Consensus 358 ~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRis~~~~~~~l~~~~~~l~~~~~~~~ 419 (422)
.. .++.++...+++++||.+.||..|+. .+++|||++.+.+++++++++|.+++++++
T Consensus 345 ~~----~~~~~~~~~l~~~~gV~v~pG~~F~~~~~~~~Ris~~~~~~~l~~al~rl~~~l~~~~ 404 (405)
T PRK06207 345 LA----VSLHDFVKILRLQAGVIVTPGTEFSPHTADSIRLNFSQDHAAAVAAAERIAQLIERYR 404 (405)
T ss_pred cC----CCHHHHHHHHHHhcCEEEeCchHhCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHHhh
Confidence 21 14667777776678999999998864 689999999888999999999999998764
No 14
>PRK07681 aspartate aminotransferase; Provisional
Probab=100.00 E-value=5.5e-51 Score=388.25 Aligned_cols=376 Identities=22% Similarity=0.344 Sum_probs=314.9
Q ss_pred ccHHHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHH
Q 014603 16 ANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRA 95 (422)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ 95 (422)
++.|+.....+.++.+.....+. ...+.++|+|+.|.|. +++++.+.+++.+.+.......|+ ..|.+++|++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~~~~~y~-~~G~~~lr~a 77 (399)
T PRK07681 5 LATRMKAFQSSIFSELGAYKKEK--IAAGHKMIDLSIGNPD----MPPADFVREEMVHTANQKESYGYT-LSGIQEFHEA 77 (399)
T ss_pred HhHHHhhcCccHHHHHHHHHHHh--hhcCCCeEEeCCCCCC----CCCCHHHHHHHHHHHhccccCCCC-CCCcHHHHHH
Confidence 45677776766677666543322 2246789999999966 567788999998877653334555 4789999999
Q ss_pred HHHHHhhcCCCCCCC-CCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHH
Q 014603 96 IADYLNRDLPYKLSP-DDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLD 174 (422)
Q Consensus 96 ia~~l~~~~~~~~~~-~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 174 (422)
|++++++.+|+.+++ ++|++|+|+++++..++.+++++||+|++++|+|+.+...++..|.+++.+++++++++.+|++
T Consensus 78 ia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~ 157 (399)
T PRK07681 78 VTEYYNNTHNVILNADKEVLLLMGSQDGLVHLPMVYANPGDIILVPDPGYTAYETGIQMAGATSYYMPLKKENDFLPDLE 157 (399)
T ss_pred HHHHHHHHhCCCCCCCCeEEECCCcHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhcCCEEEEEecCCCCCCcCCHH
Confidence 999999888888898 8999999999999999999999999999999999999999999999999999876667888999
Q ss_pred HHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCC-CCCeEEEecC
Q 014603 175 AVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IVPVLTLGSI 253 (422)
Q Consensus 175 ~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~-~~~~i~i~s~ 253 (422)
.+++.+.++++++++++|+||||.+++.+++++|+++|+++|++||+||+|..+.+++....++..+.. .+++++++||
T Consensus 158 ~l~~~~~~~~k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~ 237 (399)
T PRK07681 158 LIPEEIADKAKMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSL 237 (399)
T ss_pred HHHHhccccceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCCcccEEEEeec
Confidence 999888778999999999999999999999999999999999999999999998876654444444432 3578999999
Q ss_pred ccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhh-hccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHH
Q 014603 254 SKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDR 332 (422)
Q Consensus 254 sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 332 (422)
||.|+++|+|+||++++ +++++.+..... ...+++.+.|.++..+|++. ..++++.++.++++++.+.+.
T Consensus 238 SK~~~~~GlRiG~~i~~--------~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~ 308 (399)
T PRK07681 238 SKSYSLAGSRIGYMIGN--------EEIVRALTQFKSNTDYGVFLPIQKAACAALRNG-AAFCEKNRGIYQERRDTLVDG 308 (399)
T ss_pred ccccCCccceeEEEecC--------HHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999985 568888877654 34467888999999999763 467888889999999999999
Q ss_pred hhcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEeccChHHHHHHHHH
Q 014603 333 LKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAVEPSALEDGLGR 410 (422)
Q Consensus 333 L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRis~~~~~~~l~~~~~~ 410 (422)
|+++ ++. +..|.+|+|+|++++.. .++.++...+++++||.+.||..|+. .+++||+++.+.+++++++++
T Consensus 309 L~~~-g~~-~~~p~~g~f~~~~l~~~-----~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~~~~l~~ 381 (399)
T PRK07681 309 FRTF-GWN-VDKPAGSMFVWAEIPKG-----WTSLSFAYALMDRANVVVTPGHAFGPHGEGFVRIALVQDEEVLQQAVEN 381 (399)
T ss_pred HHHC-CCc-ccCCCeeeEEEEECCCC-----CCHHHHHHHHHHhCCEEEeCChhhCcCCCCeEEEEecCCHHHHHHHHHH
Confidence 9998 776 44788899999999742 25677888888778999999998865 479999999888999999999
Q ss_pred HHHH
Q 014603 411 MKAF 414 (422)
Q Consensus 411 l~~~ 414 (422)
|+++
T Consensus 382 l~~~ 385 (399)
T PRK07681 382 IRNS 385 (399)
T ss_pred HHHh
Confidence 9983
No 15
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=100.00 E-value=3.5e-51 Score=388.63 Aligned_cols=379 Identities=18% Similarity=0.290 Sum_probs=307.1
Q ss_pred cHHHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHH
Q 014603 17 NEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAI 96 (422)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~i 96 (422)
++|++.++...+..+.. ..+.. +..+.++|+|+.|++. +++++.+.+++.+.+.......|++..|.++||+++
T Consensus 4 ~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~ai 77 (388)
T PRK07366 4 AQRLQPLQSNVFADMDR-AKAQA-RAAGKELIDLSLGSSD----LPAPAHALEAIAQSLHDPSTHGYLLFHGTLDFREAA 77 (388)
T ss_pred hhhhhcCCccHHHHHHH-HHHHH-HhcCCCeEEeCCCCCC----CCCCHHHHHHHHHHHhCcccCCCCCCCCCHHHHHHH
Confidence 45676666554444433 33222 2247789999999965 677889999999887654456798889999999999
Q ss_pred HHHHhhcCCCCCCCC-CEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHH
Q 014603 97 ADYLNRDLPYKLSPD-DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDA 175 (422)
Q Consensus 97 a~~l~~~~~~~~~~~-~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~ 175 (422)
++++.+.+|++++++ +|++|+|+++++..++++++.+||+|++++|+|+.+...++..|.+++.+++++++++.+|++.
T Consensus 78 a~~~~~~~g~~~~~~~~I~it~Gs~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~ 157 (388)
T PRK07366 78 AQWYEQRFGLAVDPETEVLPLIGSQEGTAHLPLAVLNPGDFALLLDPGYPSHAGGVYLAGGQIYPMPLRAENDFLPVFAD 157 (388)
T ss_pred HHHHHHhhCCcCCCcCeEEECCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEECCCccCCCCCHHH
Confidence 999998888889998 6999999999999999999999999999999999999999999999999998766678889999
Q ss_pred HHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCC-CCCccccCCC-CCeEEEecC
Q 014603 176 VEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTP-FVPMGVFGSI-VPVLTLGSI 253 (422)
Q Consensus 176 l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~-~~~~~~~~~~-~~~i~i~s~ 253 (422)
+++.+.++++++++++||||||.+++.+++++|+++|+++|++||+||+|..+.+++.. ..++..++.. +++++++||
T Consensus 158 l~~~~~~~~k~i~l~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~Sf 237 (388)
T PRK07366 158 IPTEVLAQARLMVLSYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTL 237 (388)
T ss_pred HHHhhcccceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeec
Confidence 98877778899999999999999999999999999999999999999999998886643 3344444332 468999999
Q ss_pred ccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhhhcc-CcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHH
Q 014603 254 SKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISS-DPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDR 332 (422)
Q Consensus 254 sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 332 (422)
||.|++||+|+||++++ +++++++........ +.....+.++.+++.. .+.++++.++.++++++.+.+.
T Consensus 238 SK~~g~~GlRiG~~v~~--------~~li~~l~~~~~~~~~~~~~~~~~~a~~~l~~-~~~~l~~~~~~~~~~r~~l~~~ 308 (388)
T PRK07366 238 SKSYNMGGFRIGFAIGN--------AQLIQALRQVKAVVDFNQYRGILNGAIAALTG-PQATVQQTVQIFRQRRDAFINA 308 (388)
T ss_pred ccccCCcchhheehcCC--------HHHHHHHHHHHhhcccCCCHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999985 578888877664322 2223334444455542 2578999999999999999999
Q ss_pred hhcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEeccChHHHHHHHHH
Q 014603 333 LKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAVEPSALEDGLGR 410 (422)
Q Consensus 333 L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRis~~~~~~~l~~~~~~ 410 (422)
|+++ ++. +..|++|+|+|++++... ..++.++...+++++||.+.||..|+. .+++||+++.+++++++++++
T Consensus 309 L~~~-~~~-~~~p~~g~f~~~~~~~~~---~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~l~r 383 (388)
T PRK07366 309 LHQI-GWP-VPLPEATMYVWAKLPEPW---QGNSVEFCTQLVAQTGVAASPGSGFGKSGEGYVRFALVHDPDILEEAVER 383 (388)
T ss_pred HHHC-CCc-ccCCCeeEEEEEECCccc---CCCHHHHHHHHHHhCCEEEeCchHhCcCCCCeEEEEecCCHHHHHHHHHH
Confidence 9988 665 447899999999997421 013566777777888999999998865 479999999889999999999
Q ss_pred HHHHH
Q 014603 411 MKAFY 415 (422)
Q Consensus 411 l~~~~ 415 (422)
|.+++
T Consensus 384 l~~~l 388 (388)
T PRK07366 384 IAAFL 388 (388)
T ss_pred HHHhC
Confidence 98753
No 16
>PRK08960 hypothetical protein; Provisional
Probab=100.00 E-value=7.4e-51 Score=386.01 Aligned_cols=379 Identities=20% Similarity=0.338 Sum_probs=318.9
Q ss_pred cccHHHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHH
Q 014603 15 KANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARR 94 (422)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~ 94 (422)
.++.+++++.++.++++.....+. ...++++++|+.|.|+ +++++.+.+++.+.+... ...|.+..|.+++|+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~l~~g~~~----~~~~~~v~~a~~~~~~~~-~~~Y~~~~g~~~lr~ 76 (387)
T PRK08960 4 GYSRRSRDIEPFHVMALLARANEL--EAAGHDVIHLEIGEPD----FTTAEPIVAAGQAALAAG-HTRYTAARGLPALRE 76 (387)
T ss_pred chhhHHHhCCchHHHHHHHHHHHH--HhcCCCeEEeCCCCCC----CCCCHHHHHHHHHHHhcC-CCccCCCCCCHHHHH
Confidence 346678888888888888655432 1246789999999966 677899999999988753 347888899999999
Q ss_pred HHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHH
Q 014603 95 AIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLD 174 (422)
Q Consensus 95 ~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 174 (422)
++++++.+.+|.++++++|++|+|++++++.++.+++++||+|++++|+|+.+...+...|.+++.++++.++++.+|++
T Consensus 77 ~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~ 156 (387)
T PRK08960 77 AIAGFYAQRYGVDVDPERILVTPGGSGALLLASSLLVDPGKHWLLADPGYPCNRHFLRLVEGAAQLVPVGPDSRYQLTPA 156 (387)
T ss_pred HHHHHHHHHhCCCCChhhEEEccCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCCeEEEEecCcccCCCCCHH
Confidence 99999998888889999999999999999999999999999999999999999999999999999999876667789999
Q ss_pred HHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCc
Q 014603 175 AVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSIS 254 (422)
Q Consensus 175 ~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~s 254 (422)
.+++.++++++++++++|+||||.+++.+++++|+++|+++|+++|+||+|..+.+++. ..++.. .++++++++|||
T Consensus 157 ~l~~~~~~~~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~-~~~~~~--~~~~vi~~~S~S 233 (387)
T PRK08960 157 LVERHWNADTVGALVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVD-AASVLE--VDDDAFVLNSFS 233 (387)
T ss_pred HHHHHhCccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCC-CCChhh--ccCCEEEEeecc
Confidence 99998888889999999999999999999999999999999999999999998877543 223322 345799999999
Q ss_pred cccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhh-hccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHh
Q 014603 255 KRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRL 333 (422)
Q Consensus 255 K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L 333 (422)
|.|+++|+|+||++++ +++++.+..... ...+++.+.|.++..++....+.++++.++.++++++.+.+.|
T Consensus 234 K~~g~~GlRiG~~~~~--------~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~l~~~~~~~~~~~~~l~~~L 305 (387)
T PRK08960 234 KYFGMTGWRLGWLVAP--------PAAVPELEKLAQNLYISASTPAQHAALACFEPETLAILEARRAEFARRRDFLLPAL 305 (387)
T ss_pred cccCCcccEEEEEEcC--------HHHHHHHHHHHhhhccCCCHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999986 467787776654 3446688899999888875335788889999999999999999
Q ss_pred hcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC---CCeEEEEeccChHHHHHHHHH
Q 014603 334 KEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL---KDWLRITFAVEPSALEDGLGR 410 (422)
Q Consensus 334 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~---~~~iRis~~~~~~~l~~~~~~ 410 (422)
+++ ++.++..|.+|+|+|++++... .++.++...+++++||.+.||..|+. .+++||+++.+.+++.+++++
T Consensus 306 ~~~-~~~~~~~p~g~~f~~~~~~~~~----~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~~~~~~~~l~~al~~ 380 (387)
T PRK08960 306 REL-GFGIAVEPQGAFYLYADISAFG----GDAFAFCRHFLETEHVAFTPGLDFGRHQAGQHVRFAYTQSLPRLQEAVER 380 (387)
T ss_pred Hhc-CCcCCcCCCeeEEEEEeccccC----CCHHHHHHHHHHhCCEEEcCchHhCCCCCCCeEEEEecCCHHHHHHHHHH
Confidence 987 5553346888999999987411 25677777777788999999998875 469999999888999999999
Q ss_pred HHHHHH
Q 014603 411 MKAFYD 416 (422)
Q Consensus 411 l~~~~~ 416 (422)
|.++++
T Consensus 381 l~~~~~ 386 (387)
T PRK08960 381 IARGLR 386 (387)
T ss_pred HHHHHh
Confidence 988764
No 17
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=100.00 E-value=2e-50 Score=382.90 Aligned_cols=375 Identities=25% Similarity=0.429 Sum_probs=310.7
Q ss_pred cHHHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHH
Q 014603 17 NEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAI 96 (422)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~i 96 (422)
+.|+.....+.+..+.+.+.+. ...++++++|+.|+|. +++++.+.+++.+.+.......|++..|.+++|+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~i 76 (383)
T TIGR03540 3 ADRIENLPPYLFAEIDKKKAEK--KAEGVDVISLGIGDPD----LPTPKHIVEALCKAAENPENHRYPSYEGMLAYRQAV 76 (383)
T ss_pred chhhccCChhHHHHHHHHHHHH--HhcCCCeEEeCCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHH
Confidence 4566666655554444433221 1246789999999966 567789999999877654456899989999999999
Q ss_pred HHHHhhcCCCCCCCC-CEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHH
Q 014603 97 ADYLNRDLPYKLSPD-DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDA 175 (422)
Q Consensus 97 a~~l~~~~~~~~~~~-~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~ 175 (422)
++++++.+|..++++ +|++|+|+++++..++++++++||+|++++|+|..+...++..|.+++.+++++++++.+|+++
T Consensus 77 a~~~~~~~~~~~~~~~~vi~t~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~g~~~d~~~ 156 (383)
T TIGR03540 77 ADWYKRRFGVELDPETEVLSLIGSKEGIAHIPLAFVNPGDIVLVPDPGYPVYRIGTLFAGGEPYEMPLKEENGFLPDFDA 156 (383)
T ss_pred HHHHHHhhCCCCCCCCeEEECCCcHHHHHHHHHHhCCCCCEEEEeCCCCcchHHHHHhcCCEEEEEecCcccCCccCHHH
Confidence 999998777777776 6899999999999999999999999999999999999999999999999998766677789999
Q ss_pred HHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCC-CCCeEEEecCc
Q 014603 176 VEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IVPVLTLGSIS 254 (422)
Q Consensus 176 l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~-~~~~i~i~s~s 254 (422)
+++.+.++++++++++|+||||.+++.+++++|+++|+++|++||+||+|..+.+.+....++..+.. .+++++++|||
T Consensus 157 l~~~~~~~~~~v~i~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfS 236 (383)
T TIGR03540 157 IPEDIAKKAKLMFINYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLS 236 (383)
T ss_pred HHhhccccceEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEecc
Confidence 99888888999999999999999999999999999999999999999999988886654445544443 35679999999
Q ss_pred cccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhhh-ccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHh
Q 014603 255 KRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRL 333 (422)
Q Consensus 255 K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L 333 (422)
|.|+++|+|+||++++ +++++++...... ..+++.+.|.++..+|+.. +.++++.++.++++++.+.+.|
T Consensus 237 K~~g~~GlRiG~~i~~--------~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~L 307 (383)
T TIGR03540 237 KTYNMTGWRIGMAVGN--------ADLIAGLGKVKTNVDSGVFQAIQYAAIAALNGP-QDVVKEIRKIYQRRRDLLLEAL 307 (383)
T ss_pred cccCCccceeeEEeCC--------HHHHHHHHHHHHhcccCCChHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999985 4677777766533 3456778899998888753 6788888999999999999999
Q ss_pred hcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEeccChHHHHHHHHHH
Q 014603 334 KEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAVEPSALEDGLGRM 411 (422)
Q Consensus 334 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRis~~~~~~~l~~~~~~l 411 (422)
++. ++. +..|.+|+|+|+.++.. .++.++...+++++||.+.||..|+. .+++||+++.+++++++++++|
T Consensus 308 ~~~-~~~-~~~~~~~~~~~~~l~~~-----~~~~~~~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~~~~~~l~~~l~~l 380 (383)
T TIGR03540 308 KKI-GID-VEKPKATFYVWVPVPEG-----YTSAEFAARLLEETGVVVTPGVGFGEYGEGYIRISLTVPDERLEEAVARI 380 (383)
T ss_pred HhC-CCE-ecCCCcceEEEEECCCC-----CCHHHHHHHHHHHCCEEEecchhhCccCCCeEEEEecCCHHHHHHHHHHH
Confidence 998 776 44778899999998742 25677888877788999999998875 4799999998889999999988
Q ss_pred HH
Q 014603 412 KA 413 (422)
Q Consensus 412 ~~ 413 (422)
++
T Consensus 381 ~~ 382 (383)
T TIGR03540 381 KK 382 (383)
T ss_pred hh
Confidence 64
No 18
>PRK06107 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.7e-50 Score=383.61 Aligned_cols=388 Identities=22% Similarity=0.372 Sum_probs=322.5
Q ss_pred ccccHHHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHH
Q 014603 14 FKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPAR 93 (422)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr 93 (422)
++++.|+.....+....+...+.+. . .++.++++|+.|.|. +++++.+.+++.+.+... ...|++..|.+++|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr 76 (402)
T PRK06107 4 FVPAARVSRIKPSPSTAAAARAREL-R-AAGRSIVDLTVGEPD----FDTPDHIKQAAVAAIERG-ETKYTLVNGTPALR 76 (402)
T ss_pred hhhhHHhhhcCccHHHHHHHHHHHH-H-hccCCEEEcCCCCCC----CCCCHHHHHHHHHHHHcC-CCCCCCCCCCHHHH
Confidence 4677888877766554444433333 2 347789999999966 466788999999888653 35799999999999
Q ss_pred HHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCH
Q 014603 94 RAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDL 173 (422)
Q Consensus 94 ~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~ 173 (422)
+++++++.+.+|..+.+++|++|+|+++|+..++.+++++||+|++++|+|..|.......+..++.++.+.++++.+|+
T Consensus 77 ~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~vl~~~p~y~~y~~~~~~~~~~~~~v~~~~~~~~~~~~ 156 (402)
T PRK06107 77 KAIIAKLERRNGLHYADNEITVGGGAKQAIFLALMATLEAGDEVIIPAPYWVSYPDMVLANDGTPVIVACPEEQGFKLTP 156 (402)
T ss_pred HHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHhcCCCCEEEEecCCCcCHHHHHHHcCCEEEEecCCcccCCCCCH
Confidence 99999999888888889999999999999999999999999999999999999988888888888888775455678899
Q ss_pred HHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHc-CcEEEEcccccccccCCCCCCCccccCC--CCCeEEE
Q 014603 174 DAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKL-GIMVIADEVYDHLAFGNTPFVPMGVFGS--IVPVLTL 250 (422)
Q Consensus 174 ~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~-~~~li~D~~~~~~~~~~~~~~~~~~~~~--~~~~i~i 250 (422)
+.+++.+.++++++++++|+||||.+++.+++++|+++|+++ ++++|+||+|..+.|++....++..+.. .++++++
T Consensus 157 ~~l~~~~~~~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~ 236 (402)
T PRK06107 157 EALEAAITPRTRWLILNAPSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVT 236 (402)
T ss_pred HHHHhhcCcCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEE
Confidence 999998888899999999999999999999999999999998 9999999999988886654444444432 3579999
Q ss_pred ecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhhh-ccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHH
Q 014603 251 GSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQGAVPQILEKTEEEFFSKITDILRETADIC 329 (422)
Q Consensus 251 ~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l 329 (422)
+||||.|++||+|+||++++ +++++.+...... ..+++.+.|.++..+|+.. +.++++.++.++++++.+
T Consensus 237 ~S~SK~~~~pGlRiG~~~~~--------~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~~ 307 (402)
T PRK06107 237 NGVSKTYAMTGWRIGYAAGP--------ADLIAAINKLQSQSSSCPSSISQAAAAAALNGD-QSFVTESVAVYKQRRDYA 307 (402)
T ss_pred eccchhhcCcccceeeeecC--------HHHHHHHHHHHHhcccCCChHHHHHHHHHhcCC-hHHHHHHHHHHHHHHHHH
Confidence 99999998999999999986 4688888777643 4578899999999999743 578889999999999999
Q ss_pred HHHhhcCCCCCCCCCCCCceEEEEecCccc----ccC--CCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEeccChHH
Q 014603 330 CDRLKEIPCITCPKKPEGSMFVMVKLNYSL----LEG--INSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSA 403 (422)
Q Consensus 330 ~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~----~~~--~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~ 403 (422)
.+.|++++++. +..|++|+|+|++++... ..+ ..++.+++..+++++||.+.||..|+..+++||+++.+.++
T Consensus 308 ~~~L~~~~g~~-~~~p~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~Fg~~~~iRis~~~~~e~ 386 (402)
T PRK06107 308 LALLNAIPGLS-CLVPDGAFYLYVNCAGLIGKTTPEGKVLETDQDVVLYLLDSAGVAVVQGTAYGLSPYFRLSIATSLET 386 (402)
T ss_pred HHHHhcCCCCc-ccCCCcceEEeeecccccccccccccCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeCCCHHH
Confidence 99999987777 557899999999874210 001 12456777788888999999999998889999999988999
Q ss_pred HHHHHHHHHHHHHHh
Q 014603 404 LEDGLGRMKAFYDRH 418 (422)
Q Consensus 404 l~~~~~~l~~~~~~~ 418 (422)
+++++++|.++++++
T Consensus 387 l~~~l~~l~~~l~~~ 401 (402)
T PRK06107 387 LEEACARIERAVAAL 401 (402)
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999998765
No 19
>PRK06348 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.9e-50 Score=382.53 Aligned_cols=372 Identities=23% Similarity=0.442 Sum_probs=310.6
Q ss_pred cHHHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHH
Q 014603 17 NEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAI 96 (422)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~i 96 (422)
++++.......++.+..... ..+++|+|+.|.|. +++++.+.+++.+.... ....|++..|.+++|+++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~------~~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~-~~~~Y~~~~G~~~lr~~i 75 (384)
T PRK06348 7 AKKYQQMEVNIMAEIATLAK------KFPDIIDLSLGDPD----LITDESIINAAFEDAKK-GHTRYTDSGGDVELIEEI 75 (384)
T ss_pred HHHHhcCCccHHHHHHHHHH------hcCCcEEcCCCCCC----CCCCHHHHHHHHHHHhc-CCCCCCCCCCcHHHHHHH
Confidence 56777777777777775432 23568999999966 56667777766655443 346899999999999999
Q ss_pred HHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHH
Q 014603 97 ADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAV 176 (422)
Q Consensus 97 a~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l 176 (422)
++++.+.+++++++++|++|+|+++++..++.+++++||+|++++|+|..+...++..|..++.++..+++++.+|++.+
T Consensus 76 a~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l 155 (384)
T PRK06348 76 IKYYSKNYDLSFKRNEIMATVGACHGMYLALQSILDPGDEVIIHEPYFTPYKDQIEMVGGKPIILETYEEDGFQINVKKL 155 (384)
T ss_pred HHHHHHHhCCCCChhhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEecCCcCcCCcCCHHHH
Confidence 99999888888999999999999999999999999999999999999999999999999998888876556788999999
Q ss_pred HHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccC-CCCCeEEEecCcc
Q 014603 177 EALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG-SIVPVLTLGSISK 255 (422)
Q Consensus 177 ~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~-~~~~~i~i~s~sK 255 (422)
++.++++++++++++|+||||.++|.+++++|+++|+++|++||+||+|..+.+++. ..++..+. ..+++++++||||
T Consensus 156 ~~~~~~~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~~~~~vi~~~SfSK 234 (384)
T PRK06348 156 EALITSKTKAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYED-FVPMATLAGMPERTITFGSFSK 234 (384)
T ss_pred HHhhCcCccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCCC-ccchhhcCCCcCcEEEEecchh
Confidence 998888889999999999999999999999999999999999999999999887643 23434443 2467999999999
Q ss_pred ccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhhh-ccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhh
Q 014603 256 RWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLK 334 (422)
Q Consensus 256 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~ 334 (422)
.|++||+|+||++++ +++++.+...... ..+++.+.|.++..++.. .+.++++.++.++++++.+.+.|+
T Consensus 235 ~~~l~GlRiG~~v~~--------~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~r~~~~~~~L~ 305 (384)
T PRK06348 235 DFAMTGWRIGYVIAP--------DYIIETAKIINEGICFSAPTISQRAAIYALKH-RDTIVPLIKEEFQKRLEYAYKRIE 305 (384)
T ss_pred ccCCccccceeeecC--------HHHHHHHHHHHHhccCCCCHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHh
Confidence 998999999999986 4677777766543 346788999999988874 357788888999999999999999
Q ss_pred cCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEeccChHHHHHHHHHHH
Q 014603 335 EIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAVEPSALEDGLGRMK 412 (422)
Q Consensus 335 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRis~~~~~~~l~~~~~~l~ 412 (422)
+++++. +..|++|+|+|++++... .++.+++..+++++||.+.||..|+. ++++||+++.+++++++++++|+
T Consensus 306 ~~~~~~-~~~p~gg~~~~~~~~~~~----~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~al~~l~ 380 (384)
T PRK06348 306 SIPNLS-LHPPKGSIYAFINIKKTG----LSSVEFCEKLLKEAHVLVIPGKAFGESGEGYIRLACTVGIEVLEEAFNRIE 380 (384)
T ss_pred cCCCce-eccCCeeEEEEEecccCC----CCHHHHHHHHHHhCCEEEcCchhhccCCCCeEEEEecCCHHHHHHHHHHHH
Confidence 887766 457888999999986321 15677777777778999999999875 57999999988899999999987
Q ss_pred HH
Q 014603 413 AF 414 (422)
Q Consensus 413 ~~ 414 (422)
+.
T Consensus 381 ~~ 382 (384)
T PRK06348 381 KM 382 (384)
T ss_pred hh
Confidence 64
No 20
>PRK08068 transaminase; Reviewed
Probab=100.00 E-value=2.8e-50 Score=382.30 Aligned_cols=378 Identities=21% Similarity=0.338 Sum_probs=310.3
Q ss_pred cccHHHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHH
Q 014603 15 KANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARR 94 (422)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~ 94 (422)
+.+.++.+...+.++.+...+... ...++++|+|+.|.|+ ++.++.+.+++.+.+.......|++..|.++||+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~l~~~~p~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~ 77 (389)
T PRK08068 4 EPSELLKQLPKQFFASLVAKVNKK--VAEGHDVINLGQGNPD----QPTPEHIVEALQEAAENPANHKYSPFRGYPFLKE 77 (389)
T ss_pred chhhHhhhcCccHHHHHHHHHHHH--HhcCCCeEEecCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHH
Confidence 345567666666666665533322 1245778999999866 4667889999988877655668988899999999
Q ss_pred HHHHHHhhcCCCCCCCC-CEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCH
Q 014603 95 AIADYLNRDLPYKLSPD-DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDL 173 (422)
Q Consensus 95 ~ia~~l~~~~~~~~~~~-~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~ 173 (422)
++++++.+.+|.+++++ +|++|+|+++++..++.+++++||+|++++|+|..+...++..|++++.++.++++++.+|+
T Consensus 78 aia~~~~~~~g~~~~~~~~i~it~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~ 157 (389)
T PRK08068 78 AAADFYKREYGVTLDPETEVAILFGGKAGLVELPQCLMNPGDTILVPDPGYPDYLSGVALARAQFETMPLIAENNFLPDY 157 (389)
T ss_pred HHHHHHHHHhCCCCCCCccEEEcCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEeecccccCCCCCH
Confidence 99999988788788888 89999999999999999999999999999999999999999999999999987666788899
Q ss_pred HHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccc-cCCCCCeEEEec
Q 014603 174 DAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGV-FGSIVPVLTLGS 252 (422)
Q Consensus 174 ~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~-~~~~~~~i~i~s 252 (422)
+++++.+.++++++++++|+||||.++|.+++++|+++|+++|++||+||+|..+.+++....++.. .+..+++++++|
T Consensus 158 ~~l~~~~~~~~~~v~l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S 237 (389)
T PRK08068 158 TKIPEEVAEKAKLMYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYT 237 (389)
T ss_pred HHHHHhccccceEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEec
Confidence 9999888778999999999999999999999999999999999999999999988776533333222 233457899999
Q ss_pred CccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhhhc-cCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHH
Q 014603 253 ISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNIS-SDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCD 331 (422)
Q Consensus 253 ~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 331 (422)
|||.|+++|+|+||++++ +++++.+....... .+.++..|.++..++... ..++++.++.++++++.+.+
T Consensus 238 ~SK~~g~~GlRiG~~~~~--------~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~r~~~~~ 308 (389)
T PRK08068 238 LSKTFNMAGWRVAFAVGN--------ESVIEAINLLQDHLFVSLFGAIQDAAIEALLSD-QSCVAELVARYESRRNAFIS 308 (389)
T ss_pred chhccCCccceeEeEecC--------HHHHHHHHHHHhhccCCCChHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999975 56888887766432 344456777777777542 47788899999999999999
Q ss_pred HhhcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEeccChHHHHHHHH
Q 014603 332 RLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAVEPSALEDGLG 409 (422)
Q Consensus 332 ~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRis~~~~~~~l~~~~~ 409 (422)
.|+++ ++. +..|.+|+|+|+.++.. .++.++.+.+++++||.|.||..|+. .+++||+++.+++++.++++
T Consensus 309 ~L~~~-g~~-~~~~~g~~~~~v~~~~~-----~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~l~~al~ 381 (389)
T PRK08068 309 ACREI-GWE-VDAPKGSFFAWMPVPKG-----YTSEQFADLLLEKAHVAVAPGNGFGEHGEGYVRVGLLTDEERLREAVE 381 (389)
T ss_pred HHHHC-CCc-ccCCCeeEEEEEECCCC-----CCHHHHHHHHHHhCCEEEecchHhCccCCCeEEEEEcCCHHHHHHHHH
Confidence 99998 676 54778889999998742 25677878877678999999988875 57999999988889999999
Q ss_pred HHHHH
Q 014603 410 RMKAF 414 (422)
Q Consensus 410 ~l~~~ 414 (422)
+|.++
T Consensus 382 ~l~~~ 386 (389)
T PRK08068 382 RIGKL 386 (389)
T ss_pred HHHHh
Confidence 98763
No 21
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=100.00 E-value=4.7e-50 Score=380.71 Aligned_cols=376 Identities=24% Similarity=0.402 Sum_probs=310.2
Q ss_pred ccHHHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHH
Q 014603 16 ANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRA 95 (422)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ 95 (422)
++.|+....++....+.. ..+... ..+.++++|+.|+|. +++++.+.+++.+.+.......|++..|.+++|++
T Consensus 4 ~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~a 77 (385)
T PRK09276 4 LADRIKNLPPYLFAEIDK-KKAEKI-ARGVDVISLGIGDPD----LPTPDHIIEAMCKAVEDPENHQYPSYEGMLEFRKA 77 (385)
T ss_pred hhhHhhhCCccHHHHHHH-HHHHHH-hcCCCEEEecCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHH
Confidence 355666666554555443 222221 246789999999866 56778999999988765445689988899999999
Q ss_pred HHHHHhhcCCCCCCCC-CEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHH
Q 014603 96 IADYLNRDLPYKLSPD-DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLD 174 (422)
Q Consensus 96 ia~~l~~~~~~~~~~~-~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 174 (422)
+++++++.+|..++++ +|++|+|+++++..++++++++||+|++++|+|+.+...++..|.+++.+++.+++++.+|++
T Consensus 78 ia~~~~~~~g~~~~~~~~ii~t~G~~~~i~~~~~~~~~~gd~Vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~g~~~d~~ 157 (385)
T PRK09276 78 VADWYKRRFGVELDPETEVISLIGSKEGIAHIPLAFVNPGDVVLVPDPGYPVYKIGTIFAGGEPYFMPLKEENGFLPDLD 157 (385)
T ss_pred HHHHHHHHhCCCCCCCCcEEEccCcHHHHHHHHHHhCCCCCEEEEcCCCCcChHHHHHHcCCEEEEEecCCCCCCcCCHH
Confidence 9999998878778887 588999999999999999999999999999999999999999999999999876667788999
Q ss_pred HHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCC-CCCeEEEecC
Q 014603 175 AVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IVPVLTLGSI 253 (422)
Q Consensus 175 ~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~-~~~~i~i~s~ 253 (422)
.+++.+.++++++++++|+||||.+++.+++++|+++|+++|++||+||+|..+.+++....++..++. .+++++++||
T Consensus 158 ~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~ 237 (385)
T PRK09276 158 AIPEDVAKKAKLMFINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSL 237 (385)
T ss_pred HHHHhccccceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecc
Confidence 998888888999999999999999999999999999999999999999999998876654445544443 3568999999
Q ss_pred ccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhhh-ccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHH
Q 014603 254 SKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDR 332 (422)
Q Consensus 254 sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 332 (422)
||.|+++|+|+||++++ +++++.+...... ..+.+.+.|.++..+|+. .+.++++.++.++++++.+.+.
T Consensus 238 SK~~g~~GlRiG~~i~~--------~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~ 308 (385)
T PRK09276 238 SKTYNMTGWRIGFAVGN--------ADLIAGLGKVKSNVDSGVFQAIQEAGIAALNG-PQEVVEELRKIYQERRDILVEG 308 (385)
T ss_pred hhhcCCcchhheeeeCC--------HHHHHHHHHHHhhccCCCCHHHHHHHHHHHcC-cHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999986 4678888766532 335566788888888864 3578888899999999999999
Q ss_pred hhcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEeccChHHHHHHHHH
Q 014603 333 LKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAVEPSALEDGLGR 410 (422)
Q Consensus 333 L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRis~~~~~~~l~~~~~~ 410 (422)
|+++ ++. +..|.+|+|+|++++.. .++.++..++++++||.+.||..|+. ++++||+++.+++++.+++++
T Consensus 309 L~~~-~~~-~~~~~~~~~~~v~~~~~-----~~~~~l~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~~~~~~l~~~l~~ 381 (385)
T PRK09276 309 LRKL-GLE-VEPPKATFYVWAPVPKG-----YTSAEFATLLLDKAGVVVTPGNGFGEYGEGYFRIALTVPDERIEEAVER 381 (385)
T ss_pred HHhC-CCc-ccCCCcceEEEEECCCC-----CCHHHHHHHHHHhCCEEECCchhhCCCCCCeEEEEeCCCHHHHHHHHHH
Confidence 9998 676 44788889999998743 25677888887778999999988865 479999999888999999998
Q ss_pred HHH
Q 014603 411 MKA 413 (422)
Q Consensus 411 l~~ 413 (422)
|.+
T Consensus 382 l~~ 384 (385)
T PRK09276 382 IKK 384 (385)
T ss_pred Hhh
Confidence 864
No 22
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=100.00 E-value=3.5e-50 Score=382.60 Aligned_cols=372 Identities=23% Similarity=0.359 Sum_probs=308.9
Q ss_pred HHHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHH
Q 014603 18 EELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIA 97 (422)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia 97 (422)
.++...+.+.++.+...+... .+..|.++|+|+.|+|. +++++.+.+++.+.+. ....|++..|.+++|++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~l~~~~p~----~~~~~~~~~~~~~~~~--~~~~Y~~~~G~~~lr~~ia 75 (396)
T PRK09147 3 PRLDRLQPYPFEKLRALFAGV-TPPADLPPISLSIGEPK----HPTPAFIKDALAANLD--GLASYPTTAGLPALREAIA 75 (396)
T ss_pred chhhcCCcchHHHHHHHHHhh-hhccCCCeEecCCCCCC----CCCCHHHHHHHHHHhh--hhcCCCCCCCCHHHHHHHH
Confidence 356677777777777655432 23458899999999966 5678899999988764 3568999899999999999
Q ss_pred HHHhhcCCCC-CCCC-CEEEecCHHHHHHHHHHHhcCC---CCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccC
Q 014603 98 DYLNRDLPYK-LSPD-DVYLTLGCTQAIEVILTVLARP---GANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVD 172 (422)
Q Consensus 98 ~~l~~~~~~~-~~~~-~i~~~~g~~~a~~~~~~~l~~~---gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d 172 (422)
+++++.+|+. ++++ +|++|+|+++++..++++++++ ||.|+++.|+|..+...++..|.+++.+|++++++|.+|
T Consensus 76 ~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~vp~~~~~~~~~d 155 (396)
T PRK09147 76 AWLERRYGLPALDPATQVLPVNGSREALFAFAQTVIDRDGPGPLVVCPNPFYQIYEGAALLAGAEPYFLNCDPANNFAPD 155 (396)
T ss_pred HHHHHHhCCCcCCccceEEECCChHHHHHHHHHHHcCCCCCCCEEEEcCCCccchHHHHHhcCCEEEEeccCccccCccC
Confidence 9999888877 8885 8999999999999999999999 899999999999999999999999999998766678899
Q ss_pred HHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCC-CCCC-cc---ccC--CCC
Q 014603 173 LDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNT-PFVP-MG---VFG--SIV 245 (422)
Q Consensus 173 ~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~-~~~~-~~---~~~--~~~ 245 (422)
++.+++.+.++++++++++|+||||.++|.+++++|+++|++|+++||+||+|..+.|++. ...+ +. ..+ ..+
T Consensus 156 ~~~l~~~~~~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (396)
T PRK09147 156 FDAVPAEVWARTQLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFK 235 (396)
T ss_pred HHHHHHHHhhccEEEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccc
Confidence 9999887777899999999999999999999999999999999999999999999887653 1111 11 122 236
Q ss_pred CeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhhh-ccCcchHHHHHHHHHHhhchHHHHHHHHHHHHH
Q 014603 246 PVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQGAVPQILEKTEEEFFSKITDILRE 324 (422)
Q Consensus 246 ~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 324 (422)
++++++||||.|+++|+|+||++++ +++++++...... ..+++.+.|.++.+++.. +.++.+.++.+++
T Consensus 236 ~vi~~~S~SK~~~~~GlRiG~~~~~--------~~l~~~~~~~~~~~~~~~~~~~q~a~~~~~~~--~~~~~~~~~~~~~ 305 (396)
T PRK09147 236 RLVVFHSLSKRSNVPGLRSGFVAGD--------AALLKKFLLYRTYHGCAMPPAVQAASIAAWND--EAHVRENRALYRE 305 (396)
T ss_pred cEEEEeccccccCCccceeeeecCC--------HHHHHHHHHHhhhcccCCCHHHHHHHHHHhcc--hhHHHHHHHHHHH
Confidence 8999999999989999999999986 4677777765543 346677888887777753 5678889999999
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC--------CCeEEEE
Q 014603 325 TADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL--------KDWLRIT 396 (422)
Q Consensus 325 ~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--------~~~iRis 396 (422)
+++.+.+.|++. +. +..|++|+|+|++++. ++.++...+++++||.+.||..|+. .+++||+
T Consensus 306 ~~~~~~~~L~~~--~~-~~~p~~g~f~~~~~~~-------~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~ 375 (396)
T PRK09147 306 KFDAVTPILAPV--LD-VQLPDAGFYLWAKVPG-------DDTEFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIA 375 (396)
T ss_pred HHHHHHHHHHHh--cC-CCCCCeeEEEEEECCC-------CHHHHHHHHHHhCCEEEeCCccccccccCCCCCCCeEEEE
Confidence 999999999875 44 3478999999999972 4677778887788999999988752 4789999
Q ss_pred eccChHHHHHHHHHHHHHHH
Q 014603 397 FAVEPSALEDGLGRMKAFYD 416 (422)
Q Consensus 397 ~~~~~~~l~~~~~~l~~~~~ 416 (422)
++.+++++++++++|.+++.
T Consensus 376 ~~~~~~~l~~~l~rl~~~~~ 395 (396)
T PRK09147 376 LVAPLAECVEAAERIVDFCR 395 (396)
T ss_pred ecCCHHHHHHHHHHHHHHhc
Confidence 99888999999999998763
No 23
>PRK08636 aspartate aminotransferase; Provisional
Probab=100.00 E-value=9.1e-50 Score=380.10 Aligned_cols=383 Identities=21% Similarity=0.334 Sum_probs=310.5
Q ss_pred cHHHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHH
Q 014603 17 NEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAI 96 (422)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~i 96 (422)
++++++.+...+..+...+.+. .. .+..+++|+.|.|. .+.++.+.+++.+.+.......|++..|.+++|+++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~l~~g~p~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~~i 80 (403)
T PRK08636 7 FNKIKRLPKYVFAEVNELKMAA-RR-AGEDIIDFSMGNPD----GPTPQHIIDKLCESAQKPKTHGYSVSKGIYKLRLAI 80 (403)
T ss_pred HHHHHhCCccHHHHHHHHHHHH-Hh-cCCCEEEcCCcCCC----CCCCHHHHHHHHHHhcCCccCCCCCCCCCHHHHHHH
Confidence 3467777777676666543322 22 46789999999876 345666777777766544457899999999999999
Q ss_pred HHHHhhcCCCCCCCC-CEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHH
Q 014603 97 ADYLNRDLPYKLSPD-DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDA 175 (422)
Q Consensus 97 a~~l~~~~~~~~~~~-~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~ 175 (422)
++++.+.+|+.++++ +|++|+|+++++..++++++++||+|++++|+|+.+...++..|.+++.++++.++++++|++.
T Consensus 81 a~~l~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~ 160 (403)
T PRK08636 81 CNWYKRKYNVDLDPETEVVATMGSKEGYVHLVQAITNPGDVAIVPDPAYPIHSQAFILAGGNVHKMPLEYNEDFELDEDQ 160 (403)
T ss_pred HHHHHHHhCCCCCCCCeEEECCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEeccccccCccChhh
Confidence 999998888888887 7999999999999999999999999999999999999999999999999988545567888775
Q ss_pred H----HHhhc---CCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCC-CCCe
Q 014603 176 V----EALAD---ENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IVPV 247 (422)
Q Consensus 176 l----~~~~~---~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~-~~~~ 247 (422)
+ ++.++ ++++++++++|+||||.++|.+++++|+++|++|+++||+||+|..+.+++....++..++. .+++
T Consensus 161 l~~~l~~~~~~~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~~~~~~~~~~~~ 240 (403)
T PRK08636 161 FFENLEKALRESSPKPKYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTPSILEVEGAKDVA 240 (403)
T ss_pred hhhHHHHHHhhccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCCChhcCCCccccE
Confidence 4 55443 46788999999999999999999999999999999999999999998887654445555543 2457
Q ss_pred EEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhhh-ccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHH
Q 014603 248 LTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQGAVPQILEKTEEEFFSKITDILRETA 326 (422)
Q Consensus 248 i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 326 (422)
++++||||.|++||+|+||++++ +++++.+...... ..+++.+.|.++..+++. .+.++++.++.+++++
T Consensus 241 i~~~S~SK~~~~~GlRiG~iv~~--------~~li~~~~~~~~~~~~~~~~~~q~~~~~~~~~-~~~~~~~~~~~~~~~~ 311 (403)
T PRK08636 241 VESYTLSKSYNMAGWRVGFVVGN--------KKLVGALKKIKSWLDYGMFTPIQVAATIALDG-DQSCVEEIRETYRKRR 311 (403)
T ss_pred EEEEecccccCCccceeeeeeCC--------HHHHHHHHHHHHHhcccCChHHHHHHHHHHhC-cHHHHHHHHHHHHHHH
Confidence 88999999999999999999986 4677877766543 235566778877777753 3578888999999999
Q ss_pred HHHHHHhhcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEeccChHHH
Q 014603 327 DICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAVEPSAL 404 (422)
Q Consensus 327 ~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRis~~~~~~~l 404 (422)
+.+.+.|++. ++. +..|.+|+|+|++++.... . .++.+++..+++++||.+.||..|+. .+++||+++.+++++
T Consensus 312 ~~l~~~L~~~-~~~-~~~p~~g~~~~~~l~~~~~-~-~~~~~l~~~ll~~~gV~v~pg~~f~~~~~~~iRi~~~~~~~~l 387 (403)
T PRK08636 312 DVLIESFANA-GWE-LQKPRASMFVWAKIPEPAR-H-LGSLEFSKQLLTEAKVAVSPGIGFGEYGDEYVRIALIENENRI 387 (403)
T ss_pred HHHHHHHHHC-CCc-ccCCCcceEEEEECCCccC-C-CCHHHHHHHHHHhCCEEEecchhhCcCCCCeEEEEecCCHHHH
Confidence 9999999987 666 4578899999999974210 0 13567777777788999999998875 579999999889999
Q ss_pred HHHHHHHHHHHHHh
Q 014603 405 EDGLGRMKAFYDRH 418 (422)
Q Consensus 405 ~~~~~~l~~~~~~~ 418 (422)
++++++|+++++.+
T Consensus 388 ~~~~~rl~~~l~~~ 401 (403)
T PRK08636 388 RQAARNIKKFLKEL 401 (403)
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999999774
No 24
>PRK07337 aminotransferase; Validated
Probab=100.00 E-value=7.2e-50 Score=379.60 Aligned_cols=381 Identities=22% Similarity=0.427 Sum_probs=314.5
Q ss_pred ccHHHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHH
Q 014603 16 ANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRA 95 (422)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ 95 (422)
++.|+.....+.++.+.....+. . ..++++++|+.|.|. +++++.+.+++.+.+... ...|++..|.+++|++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ 75 (388)
T PRK07337 3 LAARVDAIEPFYVMELAKEAQAL-E-RAGRDIIHMGIGEPD----FTAPEPVVEAAARALRRG-VTQYTSALGLAPLREA 75 (388)
T ss_pred hhhHhHhcCchHHHHHHHHHHHH-H-hcCCCEEEeCCcCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHH
Confidence 46677777777777766544432 2 256789999999966 566788999998887643 4579888899999999
Q ss_pred HHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHH
Q 014603 96 IADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDA 175 (422)
Q Consensus 96 ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~ 175 (422)
+++++++.+|..+++++|++|+|+++++..++.+++++||+|++++|+|..+...++..|.+++.++.+.++++.+|++.
T Consensus 76 ia~~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 155 (388)
T PRK07337 76 IAAWYARRFGLDVAPERIVVTAGASAALLLACLALVERGDEVLMPDPSYPCNRHFVAAAEGRPVLVPSGPAERFQLTAAD 155 (388)
T ss_pred HHHHHHHHhCCCCChHhEEEecCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCcCCHHH
Confidence 99999988888889999999999999999999999999999999999999999888889999999998765678899999
Q ss_pred HHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCcc
Q 014603 176 VEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISK 255 (422)
Q Consensus 176 l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK 255 (422)
+++.++++++++++++|+||||.+++.+++++|+++|+++++++|+||+|..+.+.+.. .+...+ .+++++++|+||
T Consensus 156 l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~-~~~~~~--~~~vi~~~S~SK 232 (388)
T PRK07337 156 VEAAWGERTRGVLLASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAAP-VSALSL--GDDVITINSFSK 232 (388)
T ss_pred HHhhcCccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccCCCC-cChhhc--cCCEEEEEechh
Confidence 99999888999999999999999999999999999999999999999999988776542 222222 356899999999
Q ss_pred ccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhh-hccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhh
Q 014603 256 RWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLK 334 (422)
Q Consensus 256 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~ 334 (422)
.|+++|+|+||++++ +++++++..... ...+.+.+.|.++..++.......+.+.++.++++++.+.+.|+
T Consensus 233 ~~~~~G~RiG~~~~~--------~~l~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~ 304 (388)
T PRK07337 233 YFNMTGWRLGWLVVP--------EALVGTFEKLAQNLFICASALAQHAALACFEPDTLAIYERRRAEFKRRRDFIVPALE 304 (388)
T ss_pred hcCCchhheeeeecC--------HHHHHHHHHHHHHhccCCChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999986 467777776653 33467888999988888753334567788899999999999999
Q ss_pred cCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC---CCeEEEEeccChHHHHHHHHHH
Q 014603 335 EIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL---KDWLRITFAVEPSALEDGLGRM 411 (422)
Q Consensus 335 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~---~~~iRis~~~~~~~l~~~~~~l 411 (422)
++ ++.+...|++|+|+|++++....++..++.++...+++++||.+.||..|+. .+++||+++.+++++++++++|
T Consensus 305 ~~-~~~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~Ri~~~~~~~~l~~~l~rl 383 (388)
T PRK07337 305 SL-GFKVPVMPDGAFYVYADCRGVAHPAAGDSAALTQAMLHDAGVVLVPGRDFGPHAPRDYIRLSYATSMSRLEEAVARL 383 (388)
T ss_pred hc-CCccccCCCeeEEEEEecccccCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCCEEEEEecCCHHHHHHHHHHH
Confidence 87 5553346889999999987421112225677777878888999999999875 5799999998899999999999
Q ss_pred HHHH
Q 014603 412 KAFY 415 (422)
Q Consensus 412 ~~~~ 415 (422)
.+++
T Consensus 384 ~~~l 387 (388)
T PRK07337 384 GKLF 387 (388)
T ss_pred HHHh
Confidence 8865
No 25
>PTZ00377 alanine aminotransferase; Provisional
Probab=100.00 E-value=4.3e-50 Score=389.49 Aligned_cols=401 Identities=23% Similarity=0.368 Sum_probs=313.4
Q ss_pred cccHHHhhccCccHHHHHHHHHhhhh---c----cCCCCceeecCCCCCCCCC------------CCC------------
Q 014603 15 KANEELKTASGITVRGVLNSLLENLN---K----NDTRPLIPLGHGDPSAFPS------------FRT------------ 63 (422)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~----~~~~~~i~l~~g~~~~~~~------------~~~------------ 63 (422)
.++.|+..+..+....+....++... . .++.++|+|++|+|..... +..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~vi~~~~G~p~~~~~~~~~~~~~~~~~~~~p~~i~~~~~~~~ 88 (481)
T PTZ00377 9 DINPRVVAAEYAVRGLVPARAAEIKEELKTGKGKYPFDSIVYCNIGNPQALGQKPLTFYRQVLSLVEYPFLLEDPSVSSL 88 (481)
T ss_pred ccCHHHhhhhhhcCChHHHHHHHHHHHHhcCCccCCcceeEEcCCCChhhcCCCCchHHHHHHHHccChhhhcCcccccc
Confidence 45778888887776666544444321 1 1568999999999851000 222
Q ss_pred -cHHHHHHHHHHhhCC--CCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhc-CCCCEEEe
Q 014603 64 -ASVAVDAIVHSVRSA--RFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLA-RPGANILL 139 (422)
Q Consensus 64 -~~~v~~a~~~~~~~~--~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~-~~gd~Vl~ 139 (422)
|..+.+++.+.+... ....|++..|.+++|++|++++.+.+|+.+++++|++|+|+++++..++++++ ++||.|++
T Consensus 89 ~P~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~~gD~Vlv 168 (481)
T PTZ00377 89 FPADVVARAKEYLNAIGGGTGAYTDSAGYPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIGDPSDGVMI 168 (481)
T ss_pred CCHHHHHHHHHHHHhCCCcccCcCcccCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhccCCCCEEEE
Confidence 457777777665542 34579999999999999999999888888999999999999999999999998 79999999
Q ss_pred cCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC------CceEEEEeCCCCCcccccCHHHHHHHHHHHH
Q 014603 140 PRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE------NTVALVIINPGNPCGNVYTYQHLQKIAETAK 213 (422)
Q Consensus 140 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~ 213 (422)
+.|+|+.|...++..|..++.++++++++|.+|++.|++.+++ +++++++++|+||||.+++.+++++|+++|+
T Consensus 169 ~~P~y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~ 248 (481)
T PTZ00377 169 PIPQYPLYSAAITLLGGKQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCY 248 (481)
T ss_pred CCCCchhHHHHHHHcCCEEEEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHH
Confidence 9999999999999999999999987777889999999998764 6888999999999999999999999999999
Q ss_pred HcCcEEEEcccccccccCC-CCCCCcc----ccCCC----CCeEEEecCccc-cCCCCceeEEEEeeCCCCcccchhHHH
Q 014603 214 KLGIMVIADEVYDHLAFGN-TPFVPMG----VFGSI----VPVLTLGSISKR-WIVPGWRLGWLVTSDPNGILQDSGIVD 283 (422)
Q Consensus 214 ~~~~~li~D~~~~~~~~~~-~~~~~~~----~~~~~----~~~i~i~s~sK~-~~~~G~r~G~~~~~~~~~~~~~~~~~~ 283 (422)
++|++||+||+|..+.|++ ..+.++. .+..+ .++++++||||. ++++|+|+||+++.+. .+++++
T Consensus 249 ~~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~-----p~~li~ 323 (481)
T PTZ00377 249 EKGIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNI-----PPEVRE 323 (481)
T ss_pred HCCCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEEEEEeCC-----CHHHHH
Confidence 9999999999999988853 2333322 22221 268999999997 5889999999987310 156888
Q ss_pred HHHhhhhhccCcchHHHHHHHHHHhhc------hHHH---HHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEe
Q 014603 284 SIKSFLNISSDPATFIQGAVPQILEKT------EEEF---FSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVK 354 (422)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~a~~~~l~~~------~~~~---~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~ 354 (422)
++........+++.+.|.++..+++.. .+.+ +.+..+.++++++.+.+.|++++++. +..|++|+|+|+.
T Consensus 324 ~l~~~~~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~g~~-~~~p~gg~fl~~~ 402 (481)
T PTZ00377 324 QIYKLASINLCSNVVGQLMTGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNKIEGVS-CQPVEGAMYAFPR 402 (481)
T ss_pred HHHHHhheecCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcE-eecCCeeEEEEee
Confidence 887766444467889999999998631 0123 33444567899999999999988888 5588999999977
Q ss_pred cCcc--cc-----cCCCCHHHHHHHHHHhcCeEEecCCCCCC---CCeEEEEeccChHHHHHHHHHHHHHHHHhccc
Q 014603 355 LNYS--LL-----EGINSDMEFALKLAKEESVIVLPGITVGL---KDWLRITFAVEPSALEDGLGRMKAFYDRHAKK 421 (422)
Q Consensus 355 ~~~~--~~-----~~~~~~~~~~~~l~~~~gi~v~~g~~~~~---~~~iRis~~~~~~~l~~~~~~l~~~~~~~~~~ 421 (422)
++.. .. .+..++.+++..+++++||.+.||..|+. .+++|+|++.+++++++++++|.++++++.+|
T Consensus 403 ~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~~~~~~~~Rls~~~~~e~l~~~l~rl~~~~~~~~~~ 479 (481)
T PTZ00377 403 IELPEKAIQEAKERGLAPDVLYCLELLESTGIVVVPGSGFGQKPGTYHFRITILPPEEQIEEMVKKIKEFHESFMKK 479 (481)
T ss_pred ccCchhhHHHHHhcCCCcHHHHHHHHHHHcCEEEeCCcccCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHh
Confidence 6421 00 00112445667788889999999999974 46999999988889999999999999887654
No 26
>PRK05764 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.4e-49 Score=377.23 Aligned_cols=388 Identities=27% Similarity=0.461 Sum_probs=325.9
Q ss_pred ccccHHHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHH
Q 014603 14 FKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPAR 93 (422)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr 93 (422)
++++.|+.+.+++.++.++....+.. ..+..+++|+.|+|. +++++.+.+++.+.+.+. ...|++..|.+++|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr 74 (393)
T PRK05764 2 MKLSKRVSRVTPSATLAVTAKAKELK--AQGRDVISLGAGEPD----FDTPEHIKEAAIEALDDG-KTKYTPAAGIPELR 74 (393)
T ss_pred cchhhhhhhcCchHHHHHHHHHHHHH--hccCCEEEeCCCCCC----CCCCHHHHHHHHHHHhcC-CCCcCCCCChHHHH
Confidence 35788999999999999887665432 246789999999976 567789999998887654 34698888999999
Q ss_pred HHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCH
Q 014603 94 RAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDL 173 (422)
Q Consensus 94 ~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~ 173 (422)
+++++++.+.+|.++++++|++|+|+++++..++.+++++||.|++++|+|..+...++..|.+++.++.++++++.+|+
T Consensus 75 ~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~ 154 (393)
T PRK05764 75 EAIAAKLKRDNGLDYDPSQVIVTTGAKQALYNAFMALLDPGDEVIIPAPYWVSYPEMVKLAGGVPVFVPTGEENGFKLTV 154 (393)
T ss_pred HHHHHHHHHHhCCCCCHHHEEEeCCcHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCCEEEEEecCcccCCcCCH
Confidence 99999998887877889999999999999999999999999999999999999999999999999999987666788999
Q ss_pred HHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCcccc--CCCCCeEEEe
Q 014603 174 DAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF--GSIVPVLTLG 251 (422)
Q Consensus 174 ~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~--~~~~~~i~i~ 251 (422)
+.+++.++++++++++++|+||||.++|.+++++|+++|+++|+++|+|++|..+.+++....++..+ +..+++++++
T Consensus 155 ~~l~~~l~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 234 (393)
T PRK05764 155 EQLEAAITPKTKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVN 234 (393)
T ss_pred HHHHHhhCccceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEe
Confidence 99999888889999999999999999999999999999999999999999999888765433344333 2235789999
Q ss_pred cCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhh-hccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHH
Q 014603 252 SISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICC 330 (422)
Q Consensus 252 s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~ 330 (422)
||||.++++|+|+||++++ +++++++..... ....++.+.|.++..+|+. .+.++++.++.++++++.+.
T Consensus 235 s~SK~~~~~G~RiG~i~~~--------~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~ 305 (393)
T PRK05764 235 GFSKAYAMTGWRLGYAAGP--------KELIKAMSKLQSHSTSNPTSIAQYAAVAALNG-PQDEVEEMRQAFEERRDLMV 305 (393)
T ss_pred cCcccccCccceeEEEecC--------HHHHHHHHHHHhhcccCCChHHHHHHHHHHcC-ChHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999975 567888776654 3447788999999998873 35778888899999999999
Q ss_pred HHhhcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEeccChHHHHHHHHH
Q 014603 331 DRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALEDGLGR 410 (422)
Q Consensus 331 ~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~l~~~~~~ 410 (422)
+.|++++++. +..|.+++|+|+.++........++.++...+++++||.+.||..|+.++++||+++.+++++++++++
T Consensus 306 ~~L~~~~g~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~vRis~~~~~~~~~~~i~~ 384 (393)
T PRK05764 306 DGLNEIPGLE-CPKPEGAFYVFPNVSKLLGKSITDSLEFAEALLEEAGVAVVPGIAFGAPGYVRLSYATSLEDLEEGLER 384 (393)
T ss_pred HHHhhCCCCc-ccCCCcceEEEEecccccccccCCHHHHHHHHHHhCCEEEccccccCCCCEEEEEecCCHHHHHHHHHH
Confidence 9999988887 447888899999887532111113467777777888999999998887899999999889999999999
Q ss_pred HHHHHHHh
Q 014603 411 MKAFYDRH 418 (422)
Q Consensus 411 l~~~~~~~ 418 (422)
|.+++++.
T Consensus 385 l~~~~~~~ 392 (393)
T PRK05764 385 IERFLESL 392 (393)
T ss_pred HHHHHHhh
Confidence 99998754
No 27
>PRK09265 aminotransferase AlaT; Validated
Probab=100.00 E-value=3.1e-49 Score=376.85 Aligned_cols=394 Identities=25% Similarity=0.447 Sum_probs=309.4
Q ss_pred cHHHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHH
Q 014603 17 NEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAI 96 (422)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~i 96 (422)
+.++.+...+.+..+....++. +..+.++|+|+.|+|..+ .+++++.+.+++.+.+.. ...|++..|.+++|+++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~l~~g~p~~~-~~~~~~~i~~~~~~~~~~--~~~Y~~~~G~~~lr~~i 81 (404)
T PRK09265 7 SSKLENVCYDIRGPVLKEAKRL--EEEGHKILKLNIGNPAPF-GFEAPDEILRDVIRNLPT--AQGYSDSKGLFSARKAI 81 (404)
T ss_pred hHHHHhcCcchhHHHHHHHHHH--HHcCCCeEEecCCCCCcC-CCCCCHHHHHHHHHHhhc--CCCCCCCCCcHHHHHHH
Confidence 4567777777666666554433 346789999999998742 356788888888876643 45899999999999999
Q ss_pred HHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHH
Q 014603 97 ADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAV 176 (422)
Q Consensus 97 a~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l 176 (422)
++++.+....++++++|++|+|+++++..++++++++||+|++++|+|..+...++..|..++.++.+.++++.+|++.+
T Consensus 82 a~~~~~~~~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l 161 (404)
T PRK09265 82 MQYYQQKGIPDVDVDDIYIGNGVSELIVMAMQALLNNGDEVLVPAPDYPLWTAAVSLSGGKPVHYLCDEEAGWFPDLDDI 161 (404)
T ss_pred HHHHhccCCCCCCcccEEEeCChHHHHHHHHHHhCCCCCEEEEeCCCCcChHHHHHHcCCEEEEEecccccCCCCCHHHH
Confidence 99997654447889999999999999999999999999999999999999999999889888888776555677899999
Q ss_pred HHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccc
Q 014603 177 EALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKR 256 (422)
Q Consensus 177 ~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~ 256 (422)
++.++++++++++++|+||||.+++.+++++|+++|+++|++||+||+|..+.+++....++..+..+.++++++||||.
T Consensus 162 ~~~~~~~~~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~ 241 (404)
T PRK09265 162 RSKITPRTKAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGAVHISIASLAPDLLCVTFNGLSKA 241 (404)
T ss_pred HHhccccceEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcCCHHHcCCCceEEEEecchhh
Confidence 99888889999999999999999999999999999999999999999999988866544455555444468999999999
Q ss_pred cCCCCceeEEEEeeCCCCcccchhHHHHHHhhhhhccCcchHHHHHHHHHHhhchH-HHHHHHHHHHHHHHHHHHHHhhc
Q 014603 257 WIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQGAVPQILEKTEE-EFFSKITDILRETADICCDRLKE 335 (422)
Q Consensus 257 ~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~L~~ 335 (422)
|++||+|+||++++.+.... +.+++.+........+++.++|.++..+|..... ..+.+..+++.++++.+.+.|++
T Consensus 242 ~~~pGlRiG~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~L~~ 319 (404)
T PRK09265 242 YRVAGFRVGWMVLSGPKKHA--KGYIEGLDMLASMRLCANVPAQHAIQTALGGYQSINELILPGGRLYEQRDRAWELLNA 319 (404)
T ss_pred ccCcccceEEEEEeCchHHH--HHHHHHHHHHhccccCCCcHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999975321110 1234444332223346778899999999864221 11222234677788999999998
Q ss_pred CCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEeccChHHHHHHHHHHHH
Q 014603 336 IPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAVEPSALEDGLGRMKA 413 (422)
Q Consensus 336 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRis~~~~~~~l~~~~~~l~~ 413 (422)
++++. +..|.+|+|+|++++.... +..++.+.+.++++++||.+.||..|+. .+++|++++.+++++++++++|++
T Consensus 320 ~~~~~-~~~p~~g~~l~~~~~~~~~-~~~~~~~~~~~~l~~~gv~v~pg~~F~~~~~~~~Ri~~~~~~e~l~~~l~rl~~ 397 (404)
T PRK09265 320 IPGVS-CVKPKGALYAFPKLDPKVY-PIHDDEQFVLDLLLQEKVLLVQGTGFNWPEPDHFRIVTLPRVDDLEEAIGRIGR 397 (404)
T ss_pred CCCCc-ccCCCcceEEEEEeccccc-CCCCHHHHHHHHHHhCCEEEECchhhCCCCCCeEEEEeCCCHHHHHHHHHHHHH
Confidence 87877 5578999999999874211 1113455666777888999999998853 679999999889999999999999
Q ss_pred HHHHhc
Q 014603 414 FYDRHA 419 (422)
Q Consensus 414 ~~~~~~ 419 (422)
+++++.
T Consensus 398 ~l~~~~ 403 (404)
T PRK09265 398 FLSGYR 403 (404)
T ss_pred HHHHhc
Confidence 998754
No 28
>PRK05942 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2e-49 Score=376.93 Aligned_cols=378 Identities=20% Similarity=0.358 Sum_probs=307.8
Q ss_pred ccHHHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHH
Q 014603 16 ANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRA 95 (422)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ 95 (422)
++.+++.........+.. ..+.. +..|.++++|+.|+|. .++++.+.+++.+.+.......|++..|.+++|++
T Consensus 8 ~~~~~~~~~~~~~~~~~~-~~~~~-~~~g~~~i~l~~g~p~----~~~p~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~a 81 (394)
T PRK05942 8 PADRLQALPPYVFARLDE-LKARA-REQGLDLIDLGMGNPD----GAAPQPVIEAAIAALADPQNHGYPPFEGTASFRQA 81 (394)
T ss_pred hhhhhccCCCcHHHHHHH-HHHHH-HhcCCCeEEcCCCCCC----CCCCHHHHHHHHHHHhCCCCccCCCCCCCHHHHHH
Confidence 355666666553433332 22222 2246779999999866 35567778877776655445689998999999999
Q ss_pred HHHHHhhcCCCCCCCC-CEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHH
Q 014603 96 IADYLNRDLPYKLSPD-DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLD 174 (422)
Q Consensus 96 ia~~l~~~~~~~~~~~-~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 174 (422)
+++++++.++..++++ .|++|+|+++++..++.+++++||+|++++|+|+.+...+...|.+++.++++.+++|.+|++
T Consensus 82 ia~~~~~~~~~~~~~~~~i~vt~G~~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~ 161 (394)
T PRK05942 82 ITDWYHRRYGVELDPDSEALPLLGSKEGLTHLALAYVNPGDVVLVPSPAYPAHFRGPLIAGAQIYPIILKPENDWLIDLS 161 (394)
T ss_pred HHHHHHHHHCCCcCCCCeEEEccChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeecCCccCCccCHH
Confidence 9999998778778888 488999999999999999999999999999999999888888999999999876667889999
Q ss_pred HHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCC-CCCeEEEecC
Q 014603 175 AVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IVPVLTLGSI 253 (422)
Q Consensus 175 ~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~-~~~~i~i~s~ 253 (422)
++++.+.++++++++++|+||||.+++.+++++|+++|+++|++||+||+|..+.+++....++..+.. .+.+++++||
T Consensus 162 ~l~~~~~~~~k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~Sf 241 (394)
T PRK05942 162 SIPEEVAQQAKILYFNYPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTL 241 (394)
T ss_pred HHHHhccccceEEEEcCCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecc
Confidence 999988889999999999999999999999999999999999999999999988876654444444432 3457889999
Q ss_pred ccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhhh-ccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHH
Q 014603 254 SKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDR 332 (422)
Q Consensus 254 sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 332 (422)
||.|+++|+|+||++++ +++++.+...... ..+.+.++|.++..+|+. .+.++++.+++++++++.+.+.
T Consensus 242 SK~~~~~GlRiG~i~~~--------~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~ 312 (394)
T PRK05942 242 SKTYNMAGWRVGFVVGN--------RHIIQGLRTLKTNLDYGIFSALQKAAETALQL-PDSYLQQVQERYRTRRDFLIQG 312 (394)
T ss_pred hhccCChhhheeeeecC--------HHHHHHHHHHHhhcccCCCHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999985 5688888776542 345677889999999874 3578888999999999999999
Q ss_pred hhcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEeccChHHHHHHHHH
Q 014603 333 LKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAVEPSALEDGLGR 410 (422)
Q Consensus 333 L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRis~~~~~~~l~~~~~~ 410 (422)
|++. ++. +..|.+|+|+|++++.. .++.++...+++++||.+.||..|+. .+++||+++.+.+.+.+++++
T Consensus 313 L~~~-~~~-~~~~~~~~f~~~~~~~~-----~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~~~~~l~~~l~~ 385 (394)
T PRK05942 313 LGEL-GWN-IPPTKATMYLWVPCPVG-----MGSTDFALNVLQKTGVVVTPGNAFGEGGEGYVRISLIADCDRLGEALDR 385 (394)
T ss_pred HHHC-CCe-ecCCCeeeEEEEECCCC-----CCHHHHHHHHHHHCCEEEeCChhhCcCCCCeEEEEecCCHHHHHHHHHH
Confidence 9887 676 44788889999998742 24667777777888999999998864 579999999778899999999
Q ss_pred HHHHH
Q 014603 411 MKAFY 415 (422)
Q Consensus 411 l~~~~ 415 (422)
|.++-
T Consensus 386 l~~~~ 390 (394)
T PRK05942 386 LKQAG 390 (394)
T ss_pred HHHhh
Confidence 98764
No 29
>PRK09148 aminotransferase; Validated
Probab=100.00 E-value=3.1e-49 Score=376.11 Aligned_cols=382 Identities=22% Similarity=0.359 Sum_probs=306.9
Q ss_pred HHHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHH
Q 014603 18 EELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIA 97 (422)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia 97 (422)
+|+...+.+.+..+.. .....+ ..++++|+|+.|.|+ +++++.+.+++.+.+.......|++..|.+++|++++
T Consensus 5 ~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~i~l~~~~p~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia 78 (405)
T PRK09148 5 HRIRRLPPYVFEQVNR-LKAAAR-AAGADIIDLGMGNPD----LPTPQHIVDKLCETAQDPRTHRYSASKGIPGLRRAQA 78 (405)
T ss_pred hhhhcCCccHHHHHHH-HHHHHH-hcCCCeEEcCCCCCC----CCCCHHHHHHHHHHHcCcccCCCCCCCCCHHHHHHHH
Confidence 3555555554555443 222222 247789999999866 4667888899888775544568999899999999999
Q ss_pred HHHhhcCCCCCCCC-CEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHH
Q 014603 98 DYLNRDLPYKLSPD-DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAV 176 (422)
Q Consensus 98 ~~l~~~~~~~~~~~-~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l 176 (422)
+++++.+|..++++ +|++|+|+++++..++.+++++||+|++++|+|+.+...+...|.+++.++.+.++.+..+++++
T Consensus 79 ~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~l~~~ 158 (405)
T PRK09148 79 AYYARRFGVKLNPDTQVVATLGSKEGFANMAQAITAPGDVILCPNPSYPIHAFGFIMAGGVIRSVPAEPDEEFFPALERA 158 (405)
T ss_pred HHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHHHHHhcCCEEEEEeCCCCCCCccCHHHH
Confidence 99988778788887 89999999999999999999999999999999999998999999999999986554443444444
Q ss_pred HHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCC-CCCeEEEecCcc
Q 014603 177 EALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IVPVLTLGSISK 255 (422)
Q Consensus 177 ~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~-~~~~i~i~s~sK 255 (422)
.+...++++++++++|+||||.+++.+++++|+++|+++|++||+||+|..+.+++....++..+.. .+++++++||||
T Consensus 159 ~~~~~~~~~~v~l~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK 238 (405)
T PRK09148 159 VRHSIPKPIALIVNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSK 238 (405)
T ss_pred HhhccccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEecccc
Confidence 4333457899999999999999999999999999999999999999999998876544444444432 345788999999
Q ss_pred ccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhhh-ccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhh
Q 014603 256 RWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLK 334 (422)
Q Consensus 256 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~ 334 (422)
.|++||+|+||++++ +++++++...... ..+++.+.|.++..+|+. .+.++++.++.++++++.+.+.|+
T Consensus 239 ~~~~pGlR~G~~v~~--------~~~i~~l~~~~~~~~~~~~~~~q~~~~~~L~~-~~~~~~~~~~~~~~~r~~l~~~L~ 309 (405)
T PRK09148 239 TFSMAGWRMGFAVGN--------ERLIAALTRVKSYLDYGAFTPIQVAATAALNG-PQDCIAEMRELYKKRRDVLVESFG 309 (405)
T ss_pred ccCCcchheeeeeCC--------HHHHHHHHHHHHHhccCCChHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999985 5688888776643 346678899999999974 357888899999999999999999
Q ss_pred cCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEeccChHHHHHHHHHHH
Q 014603 335 EIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAVEPSALEDGLGRMK 412 (422)
Q Consensus 335 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRis~~~~~~~l~~~~~~l~ 412 (422)
++ ++. +..|++|+|+|++++.... . .++.++...+++++||.|.||..|+. ++++||+++.+++++.+++++|.
T Consensus 310 ~~-~~~-~~~p~~g~f~~~~l~~~~~-~-~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ri~~~~~~~~l~~al~~l~ 385 (405)
T PRK09148 310 RA-GWD-IPPPAASMFAWAPIPEAFR-H-LGSLEFSKLLVEKADVAVAPGVGFGEHGDGYVRIALVENEQRIRQAARNIK 385 (405)
T ss_pred Hc-CCc-cCCCCeeEEEEEECCCccC-C-CCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecCCHHHHHHHHHHHH
Confidence 87 666 4478899999999874210 0 13567777777778999999998865 57999999988899999999999
Q ss_pred HHHHHh
Q 014603 413 AFYDRH 418 (422)
Q Consensus 413 ~~~~~~ 418 (422)
+++.++
T Consensus 386 ~~l~~~ 391 (405)
T PRK09148 386 RFLSSA 391 (405)
T ss_pred HHHHHH
Confidence 998764
No 30
>PRK08361 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.6e-49 Score=377.31 Aligned_cols=380 Identities=24% Similarity=0.424 Sum_probs=317.9
Q ss_pred CccccHHHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHH
Q 014603 13 GFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPA 92 (422)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l 92 (422)
++.+++|+.+.....++.++.... ..+++|+|+.|+|. +++++.+.+++.+.+... ...|.+..|.+++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~l 75 (391)
T PRK08361 7 KYFIAGRINLIQRSKIRELFERAS------KMENVISLGIGEPD----FDTPKNIKEAAKRALDEG-WTHYTPNAGIPEL 75 (391)
T ss_pred ccchhHHHHhCCccHHHHHHHHHH------hhcCeEEcCCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHH
Confidence 355678888877777777765331 23578999999966 466788999998877653 4578888899999
Q ss_pred HHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccC
Q 014603 93 RRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVD 172 (422)
Q Consensus 93 r~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d 172 (422)
|+++++++.+.+|.++++++|++|+|+++++..++.+++++||+|++++|+|.++...+...|.+++.+++++++++.+|
T Consensus 76 r~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~g~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d 155 (391)
T PRK08361 76 REAIAEYYKKFYGVDVDVDNVIVTAGAYEATYLAFESLLEEGDEVIIPDPAFVCYVEDAKIAEAKPIRIPLREENEFQPD 155 (391)
T ss_pred HHHHHHHHHHHhCCCCCcccEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHHHHHHcCCEEEEEecCCccCCCCC
Confidence 99999999887787889999999999999999999999999999999999999999999999999999998776677899
Q ss_pred HHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEec
Q 014603 173 LDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGS 252 (422)
Q Consensus 173 ~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s 252 (422)
++.+++.++++++++++++|+||||.+++.+++++|+++|+++++++|+||+|..+.+++....++..+.. +++++++|
T Consensus 156 ~~~l~~~i~~~~~~v~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~~i~~~s 234 (391)
T PRK08361 156 PDELLELITKRTRMIVINYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYAP-DNTILANS 234 (391)
T ss_pred HHHHHHhcccccEEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcCC-CCEEEEec
Confidence 99999999888999999999999999999999999999999999999999999988775543334333322 46899999
Q ss_pred CccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhh-hccCcchHHHHHHHHHHhhch-HHHHHHHHHHHHHHHHHHH
Q 014603 253 ISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQGAVPQILEKTE-EEFFSKITDILRETADICC 330 (422)
Q Consensus 253 ~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~ 330 (422)
+||.|+++|+|+||++++ +++++.+..... ...+.+.+.|.++..+|++.. ..++++.++.++++++.+.
T Consensus 235 ~SK~~~~~GlRiG~~~~~--------~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 306 (391)
T PRK08361 235 FSKTFAMTGWRLGFVIAP--------EQVIKDMIKLHAYIIGNVASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVL 306 (391)
T ss_pred CchhcCCcHhhhhhhccC--------HHHHHHHHHHHhhhccCCChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHH
Confidence 999999999999999986 467777765543 234667788999999997643 3578889999999999999
Q ss_pred HHhhcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEeccChHHHHHHH
Q 014603 331 DRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAVEPSALEDGL 408 (422)
Q Consensus 331 ~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRis~~~~~~~l~~~~ 408 (422)
+.|++++++. +..|.+|+|+|++++... .++.++...+++++||.|.||..|+. .+++||+++.+++++++++
T Consensus 307 ~~L~~~~~~~-~~~p~g~~~~~~~l~~~~----~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~al 381 (391)
T PRK08361 307 KRLKEMPHIK-VFEPKGAFYVFANIDETG----MSSEDFAEWLLEKARVVVIPGTAFGKAGEGYIRISYATSKEKLIEAM 381 (391)
T ss_pred HHHHhCCCCe-ecCCCEEEEEEEECCCCC----CCHHHHHHHHHHhCCEEEcCchhhCCCCCCEEEEEecCCHHHHHHHH
Confidence 9999987777 557888999999987421 25677877777778999999998865 5799999998888999999
Q ss_pred HHHHHHHHH
Q 014603 409 GRMKAFYDR 417 (422)
Q Consensus 409 ~~l~~~~~~ 417 (422)
++|++++++
T Consensus 382 ~~l~~~l~~ 390 (391)
T PRK08361 382 ERMEKALEE 390 (391)
T ss_pred HHHHHHHhc
Confidence 999998864
No 31
>PRK07682 hypothetical protein; Validated
Probab=100.00 E-value=1.7e-49 Score=375.92 Aligned_cols=353 Identities=24% Similarity=0.446 Sum_probs=299.7
Q ss_pred CCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCC-CEEEecCHHHHH
Q 014603 45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPD-DVYLTLGCTQAI 123 (422)
Q Consensus 45 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~i~~~~g~~~a~ 123 (422)
.++|+|+.|.|. +++++.+.+++.+.+.. ....|++..|.+++|+++++++++.+|..++++ +|++|+|+++|+
T Consensus 20 ~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~-~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al 94 (378)
T PRK07682 20 EGVISLGVGEPD----FVTPWNVREASIRSLEQ-GYTSYTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQAL 94 (378)
T ss_pred CCeEEeCCCCCC----CCCCHHHHHHHHHHHhc-CCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHH
Confidence 578999999976 45677788888887764 346798888999999999999998888778876 799999999999
Q ss_pred HHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHH
Q 014603 124 EVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQ 203 (422)
Q Consensus 124 ~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~ 203 (422)
.+++++++++||+|++++|+|+.+...++..|.+++.++.+.++++.+|++.+++.+.++++++++++|+||||.++|.+
T Consensus 95 ~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~s~~ 174 (378)
T PRK07682 95 DVAMRAIINPGDEVLIVEPSFVSYAPLVTLAGGVPVPVATTLENEFKVQPAQIEAAITAKTKAILLCSPNNPTGAVLNKS 174 (378)
T ss_pred HHHHHHhCCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCCCCHHHHHhhcCcccEEEEEECCCCCcCcCcCHH
Confidence 99999999999999999999999999999999999888876555678999999999888899999999999999999999
Q ss_pred HHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccC-CCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHH
Q 014603 204 HLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG-SIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIV 282 (422)
Q Consensus 204 ~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~-~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 282 (422)
++++|+++|+++++++|+||+|..+.+++. ..++..+. ..+++++++||||.|+++|+|+||++++ ++++
T Consensus 175 ~~~~l~~~~~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~--------~~~i 245 (378)
T PRK07682 175 ELEEIAVIVEKHDLIVLSDEIYAELTYDEA-YTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAAP--------VYFS 245 (378)
T ss_pred HHHHHHHHHHHcCcEEEEehhhhhcccCCC-CCChhhcccccCCEEEEecCcccccChhhhhhhhhcC--------HHHH
Confidence 999999999999999999999999888653 22333332 2357999999999999999999999986 4688
Q ss_pred HHHHhhhhh-ccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCccccc
Q 014603 283 DSIKSFLNI-SSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLE 361 (422)
Q Consensus 283 ~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 361 (422)
+++...... ..+++.+.|.++..+|+.. +.++++.++.++++++.+.+.|+++ ++. +..|.+++|+|+.++...
T Consensus 246 ~~l~~~~~~~~~~~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~L~~~-~~~-~~~p~g~~~~~~~~~~~~-- 320 (378)
T PRK07682 246 EAMLKIHQYSMMCAPTMAQFAALEALRAG-NDDVIRMRDSYRKRRNFFVTSFNEI-GLT-CHVPGGAFYAFPSISSTG-- 320 (378)
T ss_pred HHHHHHHHhhccCCCHHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHHC-CCc-cCCCCeeEEEEEeccCCC--
Confidence 888766543 3466788999999999753 3568888899999999999999998 776 557888999999875311
Q ss_pred CCCCHHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEeccChHHHHHHHHHHHHHHHHh
Q 014603 362 GINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAVEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 362 ~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRis~~~~~~~l~~~~~~l~~~~~~~ 418 (422)
.++.++...+++++||.+.||..|+. ++++|||++.+++++++++++|+++++++
T Consensus 321 --~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~l~~~ 377 (378)
T PRK07682 321 --LSSEEFAEQLLLEEKVAVVPGSVFGESGEGFIRCSYATSLEQLQEAMKRMKRFVENK 377 (378)
T ss_pred --CCHHHHHHHHHHhCCEEEcCchhhCcCCCCeEEEEeCCCHHHHHHHHHHHHHHHhhc
Confidence 25677877877778999999998865 58999999988899999999999998764
No 32
>PRK05957 aspartate aminotransferase; Provisional
Probab=100.00 E-value=7.1e-49 Score=372.22 Aligned_cols=381 Identities=22% Similarity=0.351 Sum_probs=313.2
Q ss_pred cccHHHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHH
Q 014603 15 KANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARR 94 (422)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~ 94 (422)
++++|+.....+.+..... ..+. ..+.++|+.|.+. +++++.+.+++.+.+.......|++..|.+++|+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~~~l~~g~~~----~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~ 72 (389)
T PRK05957 3 QFTSRMDAVQSPIIPVVGQ-LIRE-----NPGTISLGQGVVS----YPPPPEAIEALNNFLANPENHKYQAVQGIPPLLE 72 (389)
T ss_pred hhhHHHHhcCCcHHHHHHH-HHHh-----CCCeEEccCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHH
Confidence 3466776666555544443 2221 3568999999966 5778999999998876544467998899999999
Q ss_pred HHHHHHhhcCCCCCC-CCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCH
Q 014603 95 AIADYLNRDLPYKLS-PDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDL 173 (422)
Q Consensus 95 ~ia~~l~~~~~~~~~-~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~ 173 (422)
++++++.+.+|..++ +++|++|+|+++++..++.+++++||+|++++|+|..+...++..|.+++.++.+ +++.+|+
T Consensus 73 ~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~ 150 (389)
T PRK05957 73 AITQKLQQDNGIELNNEQAIVVTAGSNMAFMNAILAITDPGDEIILNTPYYFNHEMAITMAGCQPILVPTD--DNYQLQP 150 (389)
T ss_pred HHHHHHHHHhCCCCCCCCeEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEeecC--CCCCcCH
Confidence 999999888887766 6789999999999999999999999999999999999888888899999988864 4567999
Q ss_pred HHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCcccc-CCCCCeEEEec
Q 014603 174 DAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF-GSIVPVLTLGS 252 (422)
Q Consensus 174 ~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~-~~~~~~i~i~s 252 (422)
+.+++.++++++++++++|+||||.++|.+++++|+++|+++|+++|+||+|..+.+++....+...+ +...+++++.|
T Consensus 151 ~~l~~~i~~~~klv~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S 230 (389)
T PRK05957 151 EAIEQAITPKTRAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYS 230 (389)
T ss_pred HHHHHhcCcCceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEec
Confidence 99999998889999999999999999999999999999999999999999999888765332222222 33457899999
Q ss_pred CccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhhh-ccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHH
Q 014603 253 ISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCD 331 (422)
Q Consensus 253 ~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 331 (422)
|||.|+++|+|+||++++ +++++++...... ..+++.+.|.++..+|++. ..++++..+.++++++.+.+
T Consensus 231 ~SK~~g~~GlRiG~~~~~--------~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~r~~l~~ 301 (389)
T PRK05957 231 LSKAYGFASWRIGYMVIP--------IHLLEAIKKIQDTILICPPVVSQYAALGALQVG-KSYCQQHLPEIAQVRQILLK 301 (389)
T ss_pred chhhccCccceeEEEecC--------HHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999986 4788888876643 3466778999998888752 36778888889999999999
Q ss_pred HhhcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEec-cChHHHHHHH
Q 014603 332 RLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFA-VEPSALEDGL 408 (422)
Q Consensus 332 ~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRis~~-~~~~~l~~~~ 408 (422)
.|++++++..+..|.+|+|+|++++.. .++.+++..+++++||.+.||..|+. ++++||+++ .+++++++++
T Consensus 302 ~L~~~~~~~~~~~~~gg~~~~~~~~~~-----~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~l~~~~ 376 (389)
T PRK05957 302 SLGQLQDRCTLHPANGAFYCFLKVNTD-----LNDFELVKQLIREYRVAVIPGTTFGMKNGCYLRIAYGALQKATAKEGI 376 (389)
T ss_pred HHHhcCCCccccCCCeeEEEEEeCCCC-----CChHHHHHHHHHHCCEEEccchhhCCCCCCEEEEEEecCCHHHHHHHH
Confidence 999886642255788899999998642 25778888887778999999998865 469999998 6889999999
Q ss_pred HHHHHHHHHhccc
Q 014603 409 GRMKAFYDRHAKK 421 (422)
Q Consensus 409 ~~l~~~~~~~~~~ 421 (422)
++|.+.++++-+|
T Consensus 377 ~~l~~~~~~~~~~ 389 (389)
T PRK05957 377 ERLVQGLKTIVQQ 389 (389)
T ss_pred HHHHHHHHhhhcC
Confidence 9999999886543
No 33
>PRK07568 aspartate aminotransferase; Provisional
Probab=100.00 E-value=8.1e-49 Score=374.14 Aligned_cols=384 Identities=25% Similarity=0.439 Sum_probs=315.0
Q ss_pred cccHHHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHH
Q 014603 15 KANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARR 94 (422)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~ 94 (422)
+++.++.....+.++.++......- ..+.++++|+.|.|. +++++.+.+++.+... ....|++..|.+++|+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~l~~~~~~----~~~~~~~~~a~~~~~~--~~~~Y~~~~g~~~lr~ 73 (397)
T PRK07568 2 KISKRVLNMPASPIRKLVPYADEAK--KRGIKVYHLNIGQPD----IKTPEVFFEAIKNYDE--EVLAYSHSQGIPELRE 73 (397)
T ss_pred chhhHhhhCCcchHHHHHHHHHHHH--hhCCCEEEecCCCCC----CCCCHHHHHHHHHHhc--CCcCcCCCCCCHHHHH
Confidence 4567777777778888876543221 135679999999966 5667899999887653 2457999899999999
Q ss_pred HHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCccc-CH
Q 014603 95 AIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEV-DL 173 (422)
Q Consensus 95 ~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-d~ 173 (422)
++++++. ..+.++++++|++|+|+++++..++.+++++||+|++++|+|..+...++..|.+++.++.+.++++.. ++
T Consensus 74 ~ia~~~~-~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~g~~~~~~ 152 (397)
T PRK07568 74 AFAKYYK-KWGIDVEPDEILITNGGSEAILFAMMAICDPGDEILVPEPFYANYNGFATSAGVKIVPVTTKIEEGFHLPSK 152 (397)
T ss_pred HHHHHHH-HhCCCCCcceEEEcCChHHHHHHHHHHhcCCCCEEEEecCCCccHHHHHHHcCCEEEEeecCcccCCCCCCH
Confidence 9999998 467778899999999999999999999999999999999999999888889999999998864445443 57
Q ss_pred HHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCC-CCCeEEEec
Q 014603 174 DAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IVPVLTLGS 252 (422)
Q Consensus 174 ~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~-~~~~i~i~s 252 (422)
+.+++.++++++++++++|+||||.+++.+++++|+++|+++|+++|+|++|..+.+++....++..+.. .++++++.|
T Consensus 153 ~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S 232 (397)
T PRK07568 153 EEIEKLITPKTKAILISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDS 232 (397)
T ss_pred HHHHHhcCccceEEEEECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEec
Confidence 8999988888999999999999999999999999999999999999999999998887654444444433 467999999
Q ss_pred CccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHH
Q 014603 253 ISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDR 332 (422)
Q Consensus 253 ~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 332 (422)
+||.|+++|+|+||+++++ +++++.+........+++.+.|.++..+|+.. +.++++.++.++++++.+.+.
T Consensus 233 ~SK~~~~~G~R~G~~~~~~-------~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~ 304 (397)
T PRK07568 233 VSKRYSACGARIGCLISKN-------KELIAAAMKLCQARLSPPTLEQIGAAALLDTP-ESYFDEVREEYKKRRDILYEE 304 (397)
T ss_pred chhhccCCCcceEEEecCC-------HHHHHHHHHHhhccCCCCcHHHHHHHHHhhCC-HHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999853 35666665544333467788999999999753 578888999999999999999
Q ss_pred hhcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHh-----cCeEEecCCCCCC-----CCeEEEEeccChH
Q 014603 333 LKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKE-----ESVIVLPGITVGL-----KDWLRITFAVEPS 402 (422)
Q Consensus 333 L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----~gi~v~~g~~~~~-----~~~iRis~~~~~~ 402 (422)
|++++++. +..|.+|+|+|++++.. ++.++...++++ +||.+.||..|+. ++++||+++.+++
T Consensus 305 L~~~~~~~-~~~p~g~~~~~~~l~~~------~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls~~~~~~ 377 (397)
T PRK07568 305 LNKIPGVV-CEKPKGAFYIIAKLPVD------DAEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAYVLNEE 377 (397)
T ss_pred HhcCCCce-ecCCCcceEEEEecCCC------CHHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEEEeCCHH
Confidence 99987776 55788899999998742 456777777653 6999999988732 4699999997889
Q ss_pred HHHHHHHHHHHHHHHhcccC
Q 014603 403 ALEDGLGRMKAFYDRHAKKQ 422 (422)
Q Consensus 403 ~l~~~~~~l~~~~~~~~~~~ 422 (422)
++++++++|.++++++.+++
T Consensus 378 ~~~~~~~~l~~~l~~~~~~~ 397 (397)
T PRK07568 378 DLKRAMEILKEALEKYNKRK 397 (397)
T ss_pred HHHHHHHHHHHHHHHhhccC
Confidence 99999999999999887653
No 34
>PRK08363 alanine aminotransferase; Validated
Probab=100.00 E-value=7.2e-49 Score=373.80 Aligned_cols=385 Identities=27% Similarity=0.491 Sum_probs=309.2
Q ss_pred cHHHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHH
Q 014603 17 NEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAI 96 (422)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~i 96 (422)
+.++.+.+ ..++++..... .. ..++.++|+|+.|.|.. ..+++++.+.+++.+.+... ...|++..|.+++|+++
T Consensus 5 ~~~~~~~~-~~~~~~~~~~~-~~-~~~~~~~i~l~~g~p~~-~~~~p~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~i 79 (398)
T PRK08363 5 SERAMGVE-YAIRDVVLPAR-EL-EKKGIKVIRLNIGDPVK-FDFQPPEHMKEAYCRAIKEG-HNYYGPSEGLPELREAI 79 (398)
T ss_pred hHHHHhcc-HHHHHHHHHHH-HH-HhcCCCeEEEeCCCCCc-CCCCCCHHHHHHHHHHHHcC-CCCCCCCCCcHHHHHHH
Confidence 34455444 34555443332 22 33578999999999852 23677899999999887653 35798889999999999
Q ss_pred HHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHH
Q 014603 97 ADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAV 176 (422)
Q Consensus 97 a~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l 176 (422)
++++++.+|+++++++|++|+|+++++..++.+++++||+|+++.|+|..+...++..|..++.++..+++++.+|++.+
T Consensus 80 a~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l 159 (398)
T PRK08363 80 VKREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILIPGPSYPPYTGLVKFYGGVPVEYRTIEEEGWQPDIDDI 159 (398)
T ss_pred HHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeccccccCCcCCHHHH
Confidence 99999888888999999999999999999999999999999999999999999999999888777333345677899999
Q ss_pred HHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccc
Q 014603 177 EALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKR 256 (422)
Q Consensus 177 ~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~ 256 (422)
++.+.++++++++++|+||||.+++.+++++|+++|+++|+++|+||+|..+.+.+.. .++..+....++++++||||.
T Consensus 160 ~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~~-~~~~~~~~~~~vi~~~SfSK~ 238 (398)
T PRK08363 160 RKKITEKTKAIAVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGKH-VSPGSLTKDVPVIVMNGLSKV 238 (398)
T ss_pred HhhCCcceEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCcc-cCHHHcCcCCcEEEEecchhc
Confidence 9988888999999999999999999999999999999999999999999988776532 234444555579999999999
Q ss_pred cCCCCceeEEEEeeCCCCcccchhHHHHHHhhhh----hccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHH
Q 014603 257 WIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN----ISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDR 332 (422)
Q Consensus 257 ~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 332 (422)
|+++|+|+||+++.++ +++++.+..... ...+++.+.|.++..+|.. .+.++++.+++++++++.+.+.
T Consensus 239 ~~~~GlRiG~~~~~~~------~~~~~~l~~~~~~~~~~~~~~s~~~q~~~~~~l~~-~~~~l~~~~~~~~~~~~~l~~~ 311 (398)
T PRK08363 239 YFATGWRLGYIYFVDP------EGKLAEVREAIDKLARIRLCPNTPAQFAAIAGLTG-PMDYLEEYMKKLKERRDYIYKR 311 (398)
T ss_pred cCCccceEEEEEEeCc------HHHHHHHHHHHHHHhcccccCChHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999997221 234444443321 2246788899999988864 3578888999999999999999
Q ss_pred hhcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEeccChHHHHHHHHH
Q 014603 333 LKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAVEPSALEDGLGR 410 (422)
Q Consensus 333 L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRis~~~~~~~l~~~~~~ 410 (422)
|++++++. +..|.+|+|+|++++... ..++.+++..+++++||.+.||..|+. ++++|||++.+++++++++++
T Consensus 312 L~~~~~~~-~~~p~g~~~~~~~l~~~~---~~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~~~~~l~~~l~~ 387 (398)
T PRK08363 312 LNEIPGIS-TTKPQGAFYIFPRIEEGP---WKDDKEFVLDVLHEAHVLFVHGSGFGEYGAGHFRLVFLPPVEILEEAMDR 387 (398)
T ss_pred HhcCCCCE-ecCCCeEEEEEEEeccCC---CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecCCHHHHHHHHHH
Confidence 99987776 557888999998886410 013556667777888999999998865 479999999888999999999
Q ss_pred HHHHHHHh
Q 014603 411 MKAFYDRH 418 (422)
Q Consensus 411 l~~~~~~~ 418 (422)
|++++++.
T Consensus 388 l~~~~~~~ 395 (398)
T PRK08363 388 FEEFMRER 395 (398)
T ss_pred HHHHHHHh
Confidence 99988764
No 35
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=100.00 E-value=3e-50 Score=356.25 Aligned_cols=349 Identities=27% Similarity=0.461 Sum_probs=297.3
Q ss_pred ecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCC-CCEEEecCHHHHHHHHHH
Q 014603 50 LGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSP-DDVYLTLGCTQAIEVILT 128 (422)
Q Consensus 50 l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~-~~i~~~~g~~~a~~~~~~ 128 (422)
|+.|.|+ +++|+-+.+++.+.+.....++|.+..|+++|++++++.+...+|....+ ++|++|.|+.+++..++.
T Consensus 36 LgqGfp~----~~~P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~ 111 (420)
T KOG0257|consen 36 LGQGFPD----FPPPKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALL 111 (420)
T ss_pred ccCCCCC----CCCcHHHHHHHHHHhccchhccccccCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHH
Confidence 9999966 79999999999999988778899999999999999999999877755555 579999999999999999
Q ss_pred HhcCCCCEEEecCCCccchHHHHhhCCCeEEEeecc------CCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCH
Q 014603 129 VLARPGANILLPRPGFPYYEARATHSHLEVRHFDLL------PAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTY 202 (422)
Q Consensus 129 ~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~------~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~ 202 (422)
+++++||+|++.+|.|..|.......|..++.++.. ....|.+|.+.++.+++++|+++++|+||||||.++|+
T Consensus 112 ~l~~~GDeVii~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t~kTk~Ii~ntPhNPtGkvfsR 191 (420)
T KOG0257|consen 112 GLLNPGDEVIVFEPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSSDWTLDPEELESKITEKTKAIILNTPHNPTGKVFSR 191 (420)
T ss_pred HHcCCCCEEEEecCcchhhhhHHhhcCCcceeeccccccccccCccccCChHHHHhhccCCccEEEEeCCCCCcCcccCH
Confidence 999999999999999999999999999999999987 44668899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCcccc-CCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhH
Q 014603 203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF-GSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGI 281 (422)
Q Consensus 203 ~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~-~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~ 281 (422)
+++++|+++|++||+++|.||+|..+.|++.....+..+ +..++++.++|++|+|++.|||+||++++ +.+
T Consensus 192 eeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm~ertitvgS~gKtf~~TGWrlGW~igp--------~~L 263 (420)
T KOG0257|consen 192 EELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGMYERTITVGSFGKTFGVTGWRLGWAIGP--------KHL 263 (420)
T ss_pred HHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecCCchhheEEEeccccceeeeeeeeeeeeech--------HHh
Confidence 999999999999999999999999999998755555444 45678999999999999999999999995 345
Q ss_pred HHHHHhhh-hhccCcchHHHHHHHHHHhhchH-------HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEE
Q 014603 282 VDSIKSFL-NISSDPATFIQGAVPQILEKTEE-------EFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMV 353 (422)
Q Consensus 282 ~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~-------~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~ 353 (422)
...+...+ +.....++..|.|..+++..... .+..++.+.++++++.+.+.|+++ |+. +..|++++|+|+
T Consensus 264 ~~~~~~vh~~~~~~~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~l-g~~-v~~p~gayyl~a 341 (420)
T KOG0257|consen 264 YSALFPVHQNFVFTCPTPIQEASAAAFALELACLQPGGSYFITELVKEYKEKRDILAKALEEL-GLK-VTGPEGAYYLWA 341 (420)
T ss_pred hhhHHHHhhccccccCcHHHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHhc-CCc-cccCCCceEEEE
Confidence 66665555 34456777888888777764321 345558999999999999999999 888 669999999999
Q ss_pred ecCcccc----cC---CCCHHHHHHHHHHhcCeEEecCCCCCCC-------CeEEEEeccChHHHHHHHHHHH
Q 014603 354 KLNYSLL----EG---INSDMEFALKLAKEESVIVLPGITVGLK-------DWLRITFAVEPSALEDGLGRMK 412 (422)
Q Consensus 354 ~~~~~~~----~~---~~~~~~~~~~l~~~~gi~v~~g~~~~~~-------~~iRis~~~~~~~l~~~~~~l~ 412 (422)
.++.... ++ ..++-.+...++++.|+.+.|++.|+.. +.+|++++-+++.+++++++++
T Consensus 342 dfs~~~~~~~~~~~~~~~~d~~~~~wl~~~~Gv~~IP~saF~s~~~~~~~~~~~r~~~~k~~~~L~~a~e~l~ 414 (420)
T KOG0257|consen 342 DFSLAKSWPFFEEILEKPDDFKFVRWLIKEGGVVVIPPSAFGSREHIKVAERLVRFCFCKADETLRKAIERLK 414 (420)
T ss_pred eccccccCCcchhhccCCCceeeehhhhccCcEEEeCchhcCCchhhHHHHHHHHHHHHhhHHHHHHHHHHHh
Confidence 9982110 11 1244567788999999999999999874 4567777778889999988887
No 36
>PRK06108 aspartate aminotransferase; Provisional
Probab=100.00 E-value=9.6e-49 Score=372.01 Aligned_cols=373 Identities=26% Similarity=0.447 Sum_probs=311.2
Q ss_pred HHHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHH
Q 014603 18 EELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIA 97 (422)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia 97 (422)
+++.+...+.++.+..... ..+++|+|+.|+|. +++++.+.+++.+.+.+. ...|++..|.+++|++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~------~~~~~i~l~~g~~~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~la 71 (382)
T PRK06108 3 PAARALPESGIREVANAGR------GREGVLPLWFGESD----LPTPDFIRDAAAAALADG-ETFYTHNLGIPELREALA 71 (382)
T ss_pred hhhhhCCchHHHHHHHHHh------ccCCeEEecCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHH
Confidence 3555556566666654332 23578999999976 677899999999987664 346998899999999999
Q ss_pred HHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCC-CCcccCHHHH
Q 014603 98 DYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPA-KGWEVDLDAV 176 (422)
Q Consensus 98 ~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~~~l 176 (422)
+++.+.+|..+++++|++|+|+++++..++.+++++||+|++++|+|..+...++..|.+++.++.+.+ +++.+|++.+
T Consensus 72 ~~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l 151 (382)
T PRK06108 72 RYVSRLHGVATPPERIAVTSSGVQALMLAAQALVGPGDEVVAVTPLWPNLVAAPKILGARVVCVPLDFGGGGWTLDLDRL 151 (382)
T ss_pred HHHHHHhCCCcCcceEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchHHHHHHCCCEEEEeeCCCCCCCccCCHHHH
Confidence 999987787889999999999999999999999999999999999999999999999999999998653 3577899999
Q ss_pred HHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccC-CCCCCCcccc-CCCCCeEEEecCc
Q 014603 177 EALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFG-NTPFVPMGVF-GSIVPVLTLGSIS 254 (422)
Q Consensus 177 ~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~-~~~~~~~~~~-~~~~~~i~i~s~s 254 (422)
++.++++++++++++|+||||.+++.+++++|+++|+++|+++|+||+|..+.++ +....++..+ ...+++++++|||
T Consensus 152 ~~~~~~~~~~i~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~S 231 (382)
T PRK06108 152 LAAITPRTRALFINSPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFS 231 (382)
T ss_pred HHhcCccceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeech
Confidence 9988888999999999999999999999999999999999999999999998875 2222222222 2345789999999
Q ss_pred cccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhhh-ccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHh
Q 014603 255 KRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRL 333 (422)
Q Consensus 255 K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L 333 (422)
|.|+++|+|+||++++ +++++.+...... ..+++.+.|.++..+|+.. +.++++.+++++++++.+.+.|
T Consensus 232 K~~g~~G~RiG~~~~~--------~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L 302 (382)
T PRK06108 232 KNWAMTGWRLGWLVAP--------PALGQVLEKLIEYNTSCVAQFVQRAAVAALDEG-EDFVAELVARLRRSRDHLVDAL 302 (382)
T ss_pred hhccCcccceeeeeCC--------HHHHHHHHHHHHhcccCCChHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999986 4677777765532 3467888999999999753 5678888999999999999999
Q ss_pred hcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEeccChHHHHHHHHHH
Q 014603 334 KEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAVEPSALEDGLGRM 411 (422)
Q Consensus 334 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRis~~~~~~~l~~~~~~l 411 (422)
++++++. +..|.+|+|+|++++.. .++.+++..+++++||.+.||..|+. .+++|+|++.+++++++++++|
T Consensus 303 ~~~~~~~-~~~p~~g~~~~~~l~~~-----~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ris~~~~~~~l~~~l~~l 376 (382)
T PRK06108 303 RALPGVE-VAKPDGAMYAFFRIPGV-----TDSLALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFARDPARLDEAVERL 376 (382)
T ss_pred HhCCCCc-ccCCCeeEEEEEeCCCC-----CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecCCHHHHHHHHHHH
Confidence 9888887 44788899999998642 24667888887888999999988864 5799999999899999999999
Q ss_pred HHHHH
Q 014603 412 KAFYD 416 (422)
Q Consensus 412 ~~~~~ 416 (422)
+++++
T Consensus 377 ~~~l~ 381 (382)
T PRK06108 377 RRFLA 381 (382)
T ss_pred HHHHh
Confidence 98874
No 37
>PRK08912 hypothetical protein; Provisional
Probab=100.00 E-value=1.9e-48 Score=369.82 Aligned_cols=375 Identities=23% Similarity=0.352 Sum_probs=307.3
Q ss_pred cHHHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHH
Q 014603 17 NEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAI 96 (422)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~i 96 (422)
++++...+.+.++.+.... ....+++|+.|.|. .+.|+.+.+++.+.+... ...|++..|.+++|+++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~-------~~~~~i~l~~g~p~----~~~p~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~i 72 (387)
T PRK08912 5 NPVFADLPTTIFEVMSQLA-------REHGAINLGQGFPD----DPGPEDVRRAAADALLDG-SNQYPPMMGLPELRQAV 72 (387)
T ss_pred hHHHhhCCCCHHHHHHHHH-------hhCCeEEccCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHH
Confidence 3466666666665555433 23578999999977 345677888887776543 46899999999999999
Q ss_pred HHHHhhcCCCCCCCC-CEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHH
Q 014603 97 ADYLNRDLPYKLSPD-DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDA 175 (422)
Q Consensus 97 a~~l~~~~~~~~~~~-~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~ 175 (422)
++++++.+|+.++++ +|++|+|+++++..++.+++++||+|+++.|+|..+...++..|.+++.+++++ +++.+|++.
T Consensus 73 a~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~ 151 (387)
T PRK08912 73 AAHYARFQGLDLDPETEVMVTSGATEALAAALLALVEPGDEVVLFQPLYDAYLPLIRRAGGVPRLVRLEP-PHWRLPRAA 151 (387)
T ss_pred HHHHHHHhCCCCCCcccEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCc-ccCcCCHHH
Confidence 999998888888998 999999999999999999999999999999999999999999999999998753 357899999
Q ss_pred HHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCC-CCCeEEEecCc
Q 014603 176 VEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IVPVLTLGSIS 254 (422)
Q Consensus 176 l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~-~~~~i~i~s~s 254 (422)
+++.+.++++++++++|+||||.+++.+++++|+++|+++|++||+||+|..+.+++....++..+.. .+++++++|+|
T Consensus 152 l~~~~~~~~~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~S 231 (387)
T PRK08912 152 LAAAFSPRTKAVLLNNPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAG 231 (387)
T ss_pred HHHHhCccceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeech
Confidence 99998888999999999999999999999999999999999999999999988886543334443322 35789999999
Q ss_pred cccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhhh-ccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHh
Q 014603 255 KRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRL 333 (422)
Q Consensus 255 K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L 333 (422)
|.|+++|+|+||++++ +++++.+...... ..+.++..|.++..++.. .+.++++.++.++++++.+.+.|
T Consensus 232 K~~g~~GlRiG~~~~~--------~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L 302 (387)
T PRK08912 232 KIFSLTGWKVGFVCAA--------PPLLRVLAKAHQFLTFTTPPNLQAAVAYGLGK-PDDYFEGMRADLARSRDRLAAGL 302 (387)
T ss_pred hhccCcCceeEEEecC--------HHHHHHHHHHHhhccccCChHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999986 4677777666543 235566678888777753 35678888999999999999999
Q ss_pred hcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC----CCeEEEEeccChHHHHHHHH
Q 014603 334 KEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL----KDWLRITFAVEPSALEDGLG 409 (422)
Q Consensus 334 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~----~~~iRis~~~~~~~l~~~~~ 409 (422)
+.+ ++. +..|.+++|+|+.++.... ..++.+++..+++++||.+.||..|+. .+++||+++.++++++++++
T Consensus 303 ~~~-g~~-~~~~~g~~~l~~~l~~~~~--~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~iRl~~~~~~~~l~~~l~ 378 (387)
T PRK08912 303 RRI-GFP-VLPSQGTYFLTVDLAPLGL--AEDDVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRFCFAKRDATLDEAVE 378 (387)
T ss_pred HhC-CCc-ccCCCcceEEEecccccCC--CCCHHHHHHHHHhcCCEEEecchhhCCCCCCCCEEEEEEeCCHHHHHHHHH
Confidence 998 676 4477888999998864110 125667888877888999999998843 57999999988999999999
Q ss_pred HHHHHHHH
Q 014603 410 RMKAFYDR 417 (422)
Q Consensus 410 ~l~~~~~~ 417 (422)
+|.+++++
T Consensus 379 rl~~~l~~ 386 (387)
T PRK08912 379 RLAAARRR 386 (387)
T ss_pred HHHHHHhc
Confidence 99988753
No 38
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=1.7e-48 Score=370.67 Aligned_cols=369 Identities=24% Similarity=0.387 Sum_probs=302.5
Q ss_pred HHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHH
Q 014603 19 ELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIAD 98 (422)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~ 98 (422)
+++..+.+.++.+...+... ...++.++++|+.|.|. +++++.+.+++.+.+. ....|++..|.+++|+++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~l~~~~p~----~~~~~~~~~a~~~~~~--~~~~Y~~~~G~~~lr~aia~ 75 (393)
T TIGR03538 3 NLSRLQPYPFEKLAALLAGV-TPPASKPPIALSIGEPK----HPTPAFVLEALRENLH--GLSTYPTTKGLPELRQAIAR 75 (393)
T ss_pred hhhhCCccHHHHHHHHHHhh-hhhcCCCeEEecCCCCC----CCCCHHHHHHHHHHhh--ccCCCCCCCCCHHHHHHHHH
Confidence 34555666666666544322 12257889999999976 5678899999998764 35689999999999999999
Q ss_pred HHhhcCCCC--CCCC-CEEEecCHHHHHHHHHHHhcCCCCE--EEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCH
Q 014603 99 YLNRDLPYK--LSPD-DVYLTLGCTQAIEVILTVLARPGAN--ILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDL 173 (422)
Q Consensus 99 ~l~~~~~~~--~~~~-~i~~~~g~~~a~~~~~~~l~~~gd~--Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~ 173 (422)
++++.++++ ++++ +|++|+|+++++..++++++++||. |+++.|+|..+...++..|.+++.+++++++++.+|+
T Consensus 76 ~~~~~~~~~~~~~~~~~i~it~Ga~~al~~~~~~l~~~gd~~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~ 155 (393)
T TIGR03538 76 WLERRFDLPTGVDPERHVLPVNGTREALFAFAQAVINPGQAPLVVMPNPFYQIYEGAALLAGAEPYFLNCTAENGFLPDF 155 (393)
T ss_pred HHHHhhCCcccCCCCceEEECCCcHHHHHHHHHHHcCCCCcceEEecCCCCcchHHHHHhcCCeEEEeeccccCCCCCCH
Confidence 998877765 6775 7999999999999999999999986 9999999999999999999999999987666788999
Q ss_pred HHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCC-CCCCc----cccC--CCCC
Q 014603 174 DAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNT-PFVPM----GVFG--SIVP 246 (422)
Q Consensus 174 ~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~-~~~~~----~~~~--~~~~ 246 (422)
+++++.+.++++++++++|+||||.+++.+++++|+++|+++|++||+||+|..+.+++. ...+. ...+ ..++
T Consensus 156 ~~l~~~~~~~~k~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (393)
T TIGR03538 156 DAVPESVWRRCQLLFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRR 235 (393)
T ss_pred HHHHHHHhhcceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhccccccccccc
Confidence 999988877899999999999999999999999999999999999999999998877542 22111 1121 2357
Q ss_pred eEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhhh-ccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHH
Q 014603 247 VLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQGAVPQILEKTEEEFFSKITDILRET 325 (422)
Q Consensus 247 ~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 325 (422)
+++++||||.|+++|+|+||++++ +++++++...... ..+++.+.|.++...+.. +.++++.++.++++
T Consensus 236 vi~i~S~SK~~~~~GlRvG~~i~~--------~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~ 305 (393)
T TIGR03538 236 CLVFHSLSKRSNLPGLRSGFVAGD--------AEILKAFLRYRTYHGCAMPIPTQLASIAAWND--EQHVRENRALYREK 305 (393)
T ss_pred EEEEecchhhcCCcccceEEEecC--------HHHHHHHHHHHHhhccCcCHHHHHHHHHHhcC--hHHHHHHHHHHHHH
Confidence 999999999989999999999986 4677877766543 345677888888777754 56788889999999
Q ss_pred HHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC--------CCeEEEEe
Q 014603 326 ADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL--------KDWLRITF 397 (422)
Q Consensus 326 ~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--------~~~iRis~ 397 (422)
++.+.+.|+++ +. +..|.+|+|+|++++. ++.++...+++++||.+.||..|+. .+++||++
T Consensus 306 ~~~~~~~L~~~--~~-~~~p~gg~f~~~~~~~-------~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~ 375 (393)
T TIGR03538 306 FAAVLEILGQV--LD-LELPDAGFYLWPKVPG-------DDEAFARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIAL 375 (393)
T ss_pred HHHHHHHHHhh--Cc-ccCCCeeEEEEEECCC-------CHHHHHHHHHHHCCEEEeCCccccccccCCCCCCCEEEEEe
Confidence 99999999875 33 3478999999999972 4667777877788999999998752 47999999
Q ss_pred ccChHHHHHHHHHHHHH
Q 014603 398 AVEPSALEDGLGRMKAF 414 (422)
Q Consensus 398 ~~~~~~l~~~~~~l~~~ 414 (422)
+.+++++++++++|+++
T Consensus 376 ~~~~~~l~~~l~~l~~~ 392 (393)
T TIGR03538 376 VAPLEECVEAAERIRSF 392 (393)
T ss_pred cCCHHHHHHHHHHHHHh
Confidence 98889999999999874
No 39
>PRK06290 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.5e-48 Score=368.90 Aligned_cols=357 Identities=24% Similarity=0.363 Sum_probs=297.2
Q ss_pred cCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCC-CCCC-CEEEecCH
Q 014603 42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYK-LSPD-DVYLTLGC 119 (422)
Q Consensus 42 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~-~~~~-~i~~~~g~ 119 (422)
..+.++|+|+.|.|. +++++.+.+++.+.+.......|++ .|.+++|+++++++++.+|+. ++++ +|++|+|+
T Consensus 41 ~~~~~~i~L~~g~p~----~~~~~~~~~~l~~~~~~~~~~~Y~~-~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs 115 (410)
T PRK06290 41 HPDMELIDMGVGEPD----EMADESVVEVLCEEAKKPENRGYAD-NGIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGS 115 (410)
T ss_pred cCCCCeEEcCCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCC-CCcHHHHHHHHHHHHHHcCCCcCCCcceEEEccCH
Confidence 356789999999966 5677889999888765434456875 899999999999999888877 8886 79999999
Q ss_pred HHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccc
Q 014603 120 TQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNV 199 (422)
Q Consensus 120 ~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~ 199 (422)
++++..++++++++||.|+++.|+|+.+...++..|.+++.++++.++++.+|++.+++.+.++++++++++|+||||.+
T Consensus 116 ~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~nP~NPTG~v 195 (410)
T PRK06290 116 KPALAMLPSCFINPGDVTLMTVPGYPVTGTHTKYYGGEVYNLPLLEENNFLPDLDSIPKDIKEKAKLLYLNYPNNPTGAV 195 (410)
T ss_pred HHHHHHHHHHhCCCCCEEEEeCCCCccHHHHHHHcCCEEEEEecCCCcCCcCCHHHHHHhhcccceEEEEECCCCCCCcC
Confidence 99999999999999999999999999999999999999999999776678889999998888789999999999999999
Q ss_pred cCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccC-CCCCeEEEecCccccCCCCceeEEEEeeCCCCcccc
Q 014603 200 YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG-SIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQD 278 (422)
Q Consensus 200 ~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~-~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~ 278 (422)
++.+++++|+++|+++|++||+||+|..+.+++.. .++..+. ..+++++++||||.|+++|+|+||++++
T Consensus 196 ~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~~-~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ii~~-------- 266 (410)
T PRK06290 196 ATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKP-LSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAFVVGN-------- 266 (410)
T ss_pred CCHHHHHHHHHHHHHcCeEEEEecchhhceeCCCC-cChhcCCCccccEEEEeechhhcCCchhheEeEEeC--------
Confidence 99999999999999999999999999998776532 2333332 2346799999999999999999999986
Q ss_pred hhHHHHHHhhhhh-ccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCc
Q 014603 279 SGIVDSIKSFLNI-SSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNY 357 (422)
Q Consensus 279 ~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~ 357 (422)
+++++.+...... ..+++.++|.++..+|++ ..++++.+++++++++.+.+.|++. ++. +..|++++|+|++++.
T Consensus 267 ~~l~~~l~~~~~~~~~~~~~~~q~aa~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~p~g~f~l~v~lp~ 342 (410)
T PRK06290 267 ELIVKAFATVKDNNDSGQFIAIQKAGIYALDH--PEITEKIREKYSRRLDKLVKILNEV-GFK-AEMPGGTFYLYVKAPK 342 (410)
T ss_pred HHHHHHHHHHHhccccCCcHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHHHHHHHhC-CCe-ecCCCeeeEEEEECCC
Confidence 4677877766543 335556889999999976 3578888999999999999999998 676 4478889999999975
Q ss_pred ccccC--CCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec---cChHHHHHHHHHHHHHHHHh
Q 014603 358 SLLEG--INSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA---VEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 358 ~~~~~--~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~---~~~~~l~~~~~~l~~~~~~~ 418 (422)
....+ ..++.++...|+++.++.+.||..|+ +++||+++ .++++-+++++.|++.+.++
T Consensus 343 ~~~~~~~~~~~~~~~~~Ll~~~~v~~~p~~~~~--~~lRi~~~~~~~~~~~~~~~~~~l~~~~~~~ 406 (410)
T PRK06290 343 GTKSGIKFENAEEFSQYLIKEKLISTVPWDDAG--HFLRFSVTFEAKDEEEEDRILEEIKRRLSDV 406 (410)
T ss_pred ccccCCCCCCHHHHHHHHHHhCCEEEECCcccc--CeEEEEEEcccccccchhHHHHHHHHHHhhc
Confidence 32111 12567888888888788888987653 79999998 46789999999999988664
No 40
>PRK07550 hypothetical protein; Provisional
Probab=100.00 E-value=2.9e-48 Score=368.32 Aligned_cols=378 Identities=24% Similarity=0.314 Sum_probs=314.3
Q ss_pred ccHHHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHH
Q 014603 16 ANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRA 95 (422)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ 95 (422)
++.|++.+....+++++..+.... ..+.+.|+|+.|.|. +++++.+.+++.+.+.......|++..|.+++|++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ 75 (386)
T PRK07550 2 LNPLIAALFPPPIPEVRAWLAGYD--GADGPLIDLSQAVPG----YPPPPELLRALAEAAADPAAHLYGPVEGLPELREA 75 (386)
T ss_pred cchhhhhcCChHHHHHHHHHHHHh--hcCCCeEEeCCCCCC----CCCCHHHHHHHHHHHhCcCCcCCCCCCCCHHHHHH
Confidence 456788888888999887654432 236678999999976 45678899998887754445679888899999999
Q ss_pred HHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHH
Q 014603 96 IADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDA 175 (422)
Q Consensus 96 ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~ 175 (422)
+++++.+.+|..+++++|++|+|+++++..++.+++++||+|++++|+|..+...++..|.+++.++.++++++.+|++.
T Consensus 76 ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~ 155 (386)
T PRK07550 76 YAAHYSRLYGAAISPEQVHITSGCNQAFWAAMVTLAGAGDEVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPDPAA 155 (386)
T ss_pred HHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCCEEEEEecCCCcCCCCCHHH
Confidence 99999988888889999999999999999999999999999999999999999999999999999998765677789999
Q ss_pred HHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCcccc-CCCCCeEEEecCc
Q 014603 176 VEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF-GSIVPVLTLGSIS 254 (422)
Q Consensus 176 l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~-~~~~~~i~i~s~s 254 (422)
+++.++++++++++++|+||||.++|.+++++|+++|+++|++||+||+|+.+.+++....++... +..++++++.|||
T Consensus 156 l~~~~~~~~~~v~~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~S 235 (386)
T PRK07550 156 AEALITPRTRAIALVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFS 235 (386)
T ss_pred HHHHhcccCcEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecch
Confidence 999988889999999999999999999999999999999999999999999876543322222222 2345789999999
Q ss_pred cccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhh-hccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHh
Q 014603 255 KRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRL 333 (422)
Q Consensus 255 K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L 333 (422)
|.|+++|+|+||++++ +++++.+..... ...+++.+.|.++..+++. .+.++++.++.++++++.+.+.|
T Consensus 236 K~~g~~G~RiG~i~~~--------~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L 306 (386)
T PRK07550 236 KSYALTGHRVGAVVAS--------PARIAEIEKFMDTVAICAPRIGQIAVAWGLPN-LADWRAGNRAEIARRRDAFRAVF 306 (386)
T ss_pred hhccCcccceEeeecC--------HHHHHHHHHHHhhcccCCCcHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998899999999986 467777776654 3446788999999998875 35778888889999999999999
Q ss_pred hcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEec-cChHHHHHHHHH
Q 014603 334 KEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFA-VEPSALEDGLGR 410 (422)
Q Consensus 334 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRis~~-~~~~~l~~~~~~ 410 (422)
++++++. + .+.+|+|+|++++... .++.+++..+++++||.|.||..|+. .+++||+++ .+++++++++++
T Consensus 307 ~~~~~~~-~-~~~g~~~~~~~~~~~~----~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~~~~~~~~ 380 (386)
T PRK07550 307 ARLPGWE-L-LASGAYFAYVRHPFPD----RPSREVARRLAKEAGILCLPGTMFGPGQEGYLRLAFANADVAGIGELVER 380 (386)
T ss_pred HhCCCce-e-CCCceEEEEecCCCCC----CCHHHHHHHHHHhcCEEEeCchhhCCCCCCEEEEEeecCCHHHHHHHHHH
Confidence 9875654 3 4678899999886411 25778888888888999999998864 579999999 578999999999
Q ss_pred HHHH
Q 014603 411 MKAF 414 (422)
Q Consensus 411 l~~~ 414 (422)
|.++
T Consensus 381 l~~~ 384 (386)
T PRK07550 381 LRAF 384 (386)
T ss_pred HHhh
Confidence 9875
No 41
>PRK07683 aminotransferase A; Validated
Probab=100.00 E-value=5.2e-48 Score=366.04 Aligned_cols=375 Identities=24% Similarity=0.456 Sum_probs=312.0
Q ss_pred cHHHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHH
Q 014603 17 NEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAI 96 (422)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~i 96 (422)
+.|+.......++..+..+. +.+.+|+|+.|.|. +++++.+.+++.+.+... ...|++..|.+++|+++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~------~~~~~i~l~~~~p~----~~~~~~~~~a~~~~~~~~-~~~Y~~~~g~~~lr~~i 74 (387)
T PRK07683 6 NPRVKDIQISGIRQFSNMVQ------NYDNLISLTIGQPD----FPTPSHVKEAAKRAITEN-YTSYTHNAGLLELRKAA 74 (387)
T ss_pred hHHHHhCCccHHHHHHHHHH------hcCCeEEecCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHH
Confidence 56777777777777665432 24678999999865 566788999999988653 45898889999999999
Q ss_pred HHHHhhcCCCCCCCC-CEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHH
Q 014603 97 ADYLNRDLPYKLSPD-DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDA 175 (422)
Q Consensus 97 a~~l~~~~~~~~~~~-~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~ 175 (422)
++++++.+|++++++ +|++|+|+++|+..++++++++||+|+++.|+|..+...++..|.+++.++.+. +++.+|.+.
T Consensus 75 a~~l~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~ 153 (387)
T PRK07683 75 CNFVKDKYDLHYSPESEIIVTIGASEAIDIAFRTILEPGTEVILPAPIYPGYEPIIRLCGAKPVFIDTRS-TGFRLTAEA 153 (387)
T ss_pred HHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhCCCCCEEEEcCCCccchHHHHHHcCCEEEEeecCc-ccCCCCHHH
Confidence 999998888888898 999999999999999999999999999999999999999999999999988753 467788899
Q ss_pred HHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCcccc-CCCCCeEEEecCc
Q 014603 176 VEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF-GSIVPVLTLGSIS 254 (422)
Q Consensus 176 l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~-~~~~~~i~i~s~s 254 (422)
+++.++++++++++++|+||||.+++.+++++|+++|+++|++||+||+|..+.+.+.. .++..+ +..+++++++|||
T Consensus 154 l~~~~~~~~~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~-~~~~~~~~~~~~vi~~~s~S 232 (387)
T PRK07683 154 LENAITEKTRCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQPH-TSIAHFPEMREKTIVINGLS 232 (387)
T ss_pred HHHhcCcCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCCc-CChhhccCCcCCeEEEeecc
Confidence 99988888899999999999999999999999999999999999999999988775432 244443 2335789999999
Q ss_pred cccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhhh-ccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHh
Q 014603 255 KRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRL 333 (422)
Q Consensus 255 K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L 333 (422)
|.|++||+|+||++++ +++++++...... ..+++.+.|.++..+|.+. +.++++.+++++++++.+.+.|
T Consensus 233 K~~~~pGlRiG~i~~~--------~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~l 303 (387)
T PRK07683 233 KSHSMTGWRIGFLFAP--------SYLAKHILKVHQYNVTCASSISQYAALEALTAG-KDDAKMMRHQYKKRRDYVYNRL 303 (387)
T ss_pred ccccCccceeEEEEcC--------HHHHHHHHHHHHhccCCCChHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999986 4677777765433 2355678899999899753 3567888889999999999999
Q ss_pred hcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEeccChHHHHHHHHHH
Q 014603 334 KEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAVEPSALEDGLGRM 411 (422)
Q Consensus 334 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRis~~~~~~~l~~~~~~l 411 (422)
++. ++. +..|.+|+|+|+.++... .++.+++..+++++||.+.||..|+. ++++||+++.+++++.+++++|
T Consensus 304 ~~~-~~~-~~~~~~~~~~~~~~~~~~----~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~Ri~~~~~~~~~~~al~~l 377 (387)
T PRK07683 304 ISM-GLD-VEKPTGAFYLFPSIGHFT----MSSFDFALDLVEEAGLAVVPGSAFSEYGEGYVRLSYAYSIETLKEGLDRL 377 (387)
T ss_pred HHc-CCc-ccCCCeeEEEEEecccCC----CCHHHHHHHHHHhCCEEEcCchhhCCCCCCeEEEEecCCHHHHHHHHHHH
Confidence 987 666 447888999998876411 14567777777889999999998865 5799999998899999999999
Q ss_pred HHHHHHhc
Q 014603 412 KAFYDRHA 419 (422)
Q Consensus 412 ~~~~~~~~ 419 (422)
.+++++-.
T Consensus 378 ~~~l~~~~ 385 (387)
T PRK07683 378 EAFLQQKA 385 (387)
T ss_pred HHHHHhhc
Confidence 99886543
No 42
>PRK07324 transaminase; Validated
Probab=100.00 E-value=6.9e-49 Score=369.68 Aligned_cols=347 Identities=23% Similarity=0.368 Sum_probs=298.0
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 122 (422)
.+.++++|+.|+|. ++.++.+ +++.+.+.... ..|++..|.+++|++|++++. ++++++|++|+|++++
T Consensus 24 ~~~~~~~~~~~e~~----~~~~~~~-~~~~~~~~~~~-~~Y~~~~G~~~lr~~ia~~~~-----~~~~~~vi~t~G~~~a 92 (373)
T PRK07324 24 AESCIDSLTLEELL----ALAGKNP-EAFYQELGQKK-LTYGWIEGSPEFKEAVASLYQ-----NVKPENILQTNGATGA 92 (373)
T ss_pred ccCCCCCCcHHHHH----hccCcch-HHHHHHHhcCC-ccCCCCCCCHHHHHHHHHHhc-----CCChhhEEEcCChHHH
Confidence 47889999999976 4666677 77777776543 489998999999999999984 3678999999999999
Q ss_pred HHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCH
Q 014603 123 IEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTY 202 (422)
Q Consensus 123 ~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~ 202 (422)
+.+++.+++++||+|+++.|+|..+...++..|.+++.++++.++++.+|++.+++.++++++++++++|+||||.+++.
T Consensus 93 l~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~kli~i~~p~NPtG~~~~~ 172 (373)
T PRK07324 93 NFLVLYALVEPGDHVISVYPTYQQLYDIPESLGAEVDYWQLKEENGWLPDLDELRRLVRPNTKLICINNANNPTGALMDR 172 (373)
T ss_pred HHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHhCCCCCcEEEEeCCCCCCCCCCCH
Confidence 99999999999999999999999999999999999999998776778889999999888889999999999999999999
Q ss_pred HHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHH
Q 014603 203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIV 282 (422)
Q Consensus 203 ~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 282 (422)
+++++|+++|+++|+++|+||+|..+.+++. ..++.. ..+++++++||||.|+++|+|+||++++ ++++
T Consensus 173 ~~l~~i~~~a~~~~~~ii~De~y~~l~~~~~-~~s~~~--~~~~~I~~~s~SK~~~~~G~RiG~i~~~--------~~li 241 (373)
T PRK07324 173 AYLEEIVEIARSVDAYVLSDEVYRPLDEDGS-TPSIAD--LYEKGISTNSMSKTYSLPGIRVGWIAAN--------EEVI 241 (373)
T ss_pred HHHHHHHHHHHHCCCEEEEEccccccccCCC-CCChhh--ccCCEEEEecchhhcCCccceeEEEecC--------HHHH
Confidence 9999999999999999999999998877543 223322 2356899999999999999999999985 5688
Q ss_pred HHHHhhhhh-ccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCccccc
Q 014603 283 DSIKSFLNI-SSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLE 361 (422)
Q Consensus 283 ~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 361 (422)
+++...... +.+++.+.|.++..+|+. .+.++++.++.++++++.+.+.|++.+++. +..|.+|+++|+.++..
T Consensus 242 ~~~~~~~~~~~~~~~~~~q~~a~~~l~~-~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~-~~~p~gg~~~~i~~~~~--- 316 (373)
T PRK07324 242 DILRKYRDYTMICAGVFDDMLASLALEH-RDAILERNRKIVRTNLAILDEWVAKEPRVS-YVKPKAVSTSFVKLDVD--- 316 (373)
T ss_pred HHHHHHhCcEEecCChHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHHHHhcCCCce-EECCCceEEEEEEeCCC---
Confidence 888887643 346677888888888864 456788888999999999999999887776 45788888888888642
Q ss_pred CCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEeccChHHHHHHHHHHHHHHHHh
Q 014603 362 GINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 362 ~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~l~~~~~~l~~~~~~~ 418 (422)
.++.+++.++++++||.|.||..|+.++++|||++.+++.+++++++|.++++++
T Consensus 317 --~~~~~~~~~ll~~~gv~v~pg~~F~~~~~iRis~~~~~~~l~~~l~rl~~~l~~~ 371 (373)
T PRK07324 317 --MPSEDFCLKLLKETGVLLVPGNRFDLEGHVRIGYCCDTETLKKGLKKLSEFLREF 371 (373)
T ss_pred --CCHHHHHHHHHHhcCEEEECccccCCCCeEEEEecCCHHHHHHHHHHHHHHHHhc
Confidence 2577888888888899999999998889999999988999999999999999875
No 43
>PRK12414 putative aminotransferase; Provisional
Probab=100.00 E-value=2.7e-48 Score=367.61 Aligned_cols=349 Identities=21% Similarity=0.410 Sum_probs=292.2
Q ss_pred CCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCC-CCEEEecCHHHH
Q 014603 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSP-DDVYLTLGCTQA 122 (422)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~-~~i~~~~g~~~a 122 (422)
..++|+|+.|.|. +++++.+.+++.+.+... ...|++..|.+++|+.+++++++.+|..+++ ++|++|+|++++
T Consensus 28 ~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~a 102 (384)
T PRK12414 28 QHDALNLSQGAPN----FAPDPALVEGVARAMRDG-HNQYAPMAGIAALREALAEKTERLYGARYDPASEVTVIASASEG 102 (384)
T ss_pred hCCeEEcCCCCCC----CCCCHHHHHHHHHHHHhC-CCCcCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHH
Confidence 4678999999966 567889999998877643 4689998999999999999998877876665 689999999999
Q ss_pred HHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCH
Q 014603 123 IEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTY 202 (422)
Q Consensus 123 ~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~ 202 (422)
+..++++++.+||+|+++.|+|..+...++..|.+++.+++++ +++.+|++.+++.++++++++++++|+||||.+++.
T Consensus 103 l~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~~~l~~~~~~v~i~~p~NPTG~~~s~ 181 (384)
T PRK12414 103 LYAAISALVHPGDEVIYFEPSFDSYAPIVRLQGATPVAIKLSP-EDFRVNWDEVAAAITPRTRMIIVNTPHNPSATVFSA 181 (384)
T ss_pred HHHHHHHhcCCCCEEEEeCCCccchHHHHHHcCCEEEEEecCc-cccccCHHHHHhhcCcccEEEEEcCCCCCCCcCCCH
Confidence 9999999999999999999999999999999999999998754 357799999999988889999999999999999999
Q ss_pred HHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccC-CCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhH
Q 014603 203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG-SIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGI 281 (422)
Q Consensus 203 ~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~-~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~ 281 (422)
+++++|+++|+++|+++|+||+|..+.|++....++..+. ..+++++++||||.|+++|+|+||++++ +++
T Consensus 182 ~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRiG~~v~~--------~~l 253 (384)
T PRK12414 182 ADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGWRVGYCLAP--------AEL 253 (384)
T ss_pred HHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCccceEEEEecC--------HHH
Confidence 9999999999999999999999999888764433444333 2457999999999999999999999986 467
Q ss_pred HHHHHhhhh-hccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccc
Q 014603 282 VDSIKSFLN-ISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLL 360 (422)
Q Consensus 282 ~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~ 360 (422)
++.+..... ...+++.+.|.++..+|+.. .+..+.++.++++++.+.+.|++. ++. +..|.+|+|+|++++...
T Consensus 254 ~~~l~~~~~~~~~~~s~~~q~a~~~~l~~~--~~~~~~~~~~~~~r~~l~~~L~~~-g~~-~~~~~gg~~~~~~~~~~~- 328 (384)
T PRK12414 254 MDEIRKVHQFMVFSADTPMQHAFAEALAEP--ASYLGLGAFYQRKRDLLARELAGS-RFE-LLPSEGSFFMLARFRHFS- 328 (384)
T ss_pred HHHHHHHHhheecCCCcHHHHHHHHHhcCC--hHHHHHHHHHHHHHHHHHHHHHhC-CCe-ecCCCcceEEEEcccccC-
Confidence 787877664 23467889999999999753 233457788899999999999997 666 447888999998886310
Q ss_pred cCCCCHHHHHHHHHHhcCeEEecCCCCCC----CCeEEEEeccChHHHHHHHHHHHH
Q 014603 361 EGINSDMEFALKLAKEESVIVLPGITVGL----KDWLRITFAVEPSALEDGLGRMKA 413 (422)
Q Consensus 361 ~~~~~~~~~~~~l~~~~gi~v~~g~~~~~----~~~iRis~~~~~~~l~~~~~~l~~ 413 (422)
+ ..+.+++..+++++||.+.||..|+. .+++||+++.+++++++++++|.+
T Consensus 329 -~-~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis~~~~~~~~~~~~~rl~~ 383 (384)
T PRK12414 329 -D-ESDSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRLSFSKDDATLVEGARRLCS 383 (384)
T ss_pred -C-CCHHHHHHHHHHhCCEEEecchhhcCCCCCCCEEEEEecCCHHHHHHHHHHHhh
Confidence 0 13567777777888999999998853 478999999889999999999864
No 44
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=100.00 E-value=3.1e-48 Score=340.14 Aligned_cols=355 Identities=24% Similarity=0.400 Sum_probs=311.5
Q ss_pred CCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHH
Q 014603 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI 123 (422)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~ 123 (422)
..+++.|-+.+.+ |+.+|++++|+++.++++. .+|+ .+.+++-+++++|..+.+++.+.++.|++++|...++
T Consensus 24 ~~DvlPmWVADMD----f~~pp~i~~Al~~rvdhGv-fGY~--~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpgi 96 (388)
T COG1168 24 NEDVLPMWVADMD----FPTPPEIIEALRERVDHGV-FGYP--YGSDELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPGI 96 (388)
T ss_pred CCCcceeeeeccc----CCCCHHHHHHHHHHHhcCC-CCCC--CCCHHHHHHHHHHHHHhcCCCCCcceEEEcCcchHhH
Confidence 4788999888844 8999999999999998864 4776 4567899999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeecc-CCCCcccCHHHHHHhhcCC-ceEEEEeCCCCCcccccC
Q 014603 124 EVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLL-PAKGWEVDLDAVEALADEN-TVALVIINPGNPCGNVYT 201 (422)
Q Consensus 124 ~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~d~~~l~~~~~~~-~~~i~i~~p~nptG~~~~ 201 (422)
..+++.++++||.|++..|.|+++....+..|.++...|+. .++.|.+|.+.||+.+.+. ++++++||||||||.+++
T Consensus 97 ~~~I~~~T~~gd~Vvi~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iLCnPHNP~Grvwt 176 (388)
T COG1168 97 SLAIRALTKPGDGVVIQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDERVKLFILCNPHNPTGRVWT 176 (388)
T ss_pred HHHHHHhCcCCCeeEecCCCchHHHHHHhhcCcEEEeccccccCCcEEecHHHHHHHHhcCCccEEEEeCCCCCCCcccc
Confidence 99999999999999999999999999999999999999986 3456888999999988664 689999999999999999
Q ss_pred HHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCC--CCeEEEecCccccCCCCceeEEEEeeCCCCcccch
Q 014603 202 YQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSI--VPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDS 279 (422)
Q Consensus 202 ~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~--~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~ 279 (422)
.+++.+|.++|.+||++||+||+|+.+.+.|+...++..+... ++.+++.|.||+|..+|+.+++++.++ +
T Consensus 177 ~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n-------~ 249 (388)
T COG1168 177 KEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISN-------R 249 (388)
T ss_pred HHHHHHHHHHHHHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccccccchhhhheeEEecC-------H
Confidence 9999999999999999999999999999999766676666543 678999999999999999999999986 3
Q ss_pred hHHHHHHhhh--hhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCCCCCCCceEEEEecC
Q 014603 280 GIVDSIKSFL--NISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKE-IPCITCPKKPEGSMFVMVKLN 356 (422)
Q Consensus 280 ~~~~~~~~~~--~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~g~~~~~~~~ 356 (422)
++..++.+.. .....+|.++..|..++.+. .+.|++++.+.++.+++++.+.|.+ +|++. +..|++.+.+|+.+.
T Consensus 250 ~lr~~~~~~l~~~~~~~~n~lg~~A~~aAY~~-G~~WLd~L~~yl~~N~~~~~~~l~~~~P~v~-v~~p~gTYL~WLD~r 327 (388)
T COG1168 250 ELRAKFLKRLKRNGLHGPSALGIIATEAAYNQ-GEPWLDELLEYLKDNRDYVADFLNKHLPGVK-VTEPQGTYLAWLDCR 327 (388)
T ss_pred HHHHHHHHHHHHhcCCCCchHHHHHHHHHHHh-chHHHHHHHHHHHHHHHHHHHHHHhhCCCcE-EecCCCceeeeeecc
Confidence 4544443333 23458899999999999986 4799999999999999999999998 58999 669999999999987
Q ss_pred cccccCCCCHHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEeccChHHHHHHHHHHHHHHHHh
Q 014603 357 YSLLEGINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAVEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 357 ~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRis~~~~~~~l~~~~~~l~~~~~~~ 418 (422)
.-.. ++.+....++++.+|.+.+|..||. .+++|++++++.+.+++++++|..++++.
T Consensus 328 ~l~l----~d~~l~~~ll~~akVal~~G~~FG~~g~gf~RlN~acpr~~L~eal~ri~~al~~~ 387 (388)
T COG1168 328 ELGL----DDSELAEFLLEEAKVALSPGSTFGEEGSGFVRLNFACPRAILEEALERLKRALKKR 387 (388)
T ss_pred ccCC----ChHHHHHHHHHhhcEeccCCCccCcCCCceEEEecCCCHHHHHHHHHHHHHHHhcc
Confidence 6432 4567778888999999999999987 57999999999999999999999988753
No 45
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=100.00 E-value=9.1e-48 Score=364.91 Aligned_cols=378 Identities=22% Similarity=0.450 Sum_probs=309.7
Q ss_pred cccHHHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHH
Q 014603 15 KANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARR 94 (422)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~ 94 (422)
++++|+...+...+++++.... +.+++|+|+.|.|. +.+++.+.+++.+.+... ...|.+..|.+++|+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~------~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~ 74 (391)
T PRK07309 6 RFNKQLDKIEVSLIRQFDQSIS------DIPGILKLTLGEPD----FTTPDHVKEAAKRAIDAN-QSHYTGMAGLLELRQ 74 (391)
T ss_pred HHHhhhhhcCccHHHHHHHHHH------hcCCeEEcCCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHH
Confidence 3467888887777777765332 23679999999976 466788889988877643 347988889999999
Q ss_pred HHHHHHhhcCCCCCCC-CCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCH
Q 014603 95 AIADYLNRDLPYKLSP-DDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDL 173 (422)
Q Consensus 95 ~ia~~l~~~~~~~~~~-~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~ 173 (422)
++++++++.+++.+.+ ++|++|+|+++++++++++++++||+|++++|+|.++...++..|.+++.++.+. +++.+|+
T Consensus 75 ~ia~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~d~ 153 (391)
T PRK07309 75 AAADFVKEKYNLDYAPENEILVTIGATEALSASLTAILEPGDKVLLPAPAYPGYEPIVNLVGAEIVEIDTTE-NDFVLTP 153 (391)
T ss_pred HHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEEecCC-cCCcCCH
Confidence 9999999877777664 7899999999999999999999999999999999999999999999999888643 4567899
Q ss_pred HHHHHhhcC---CceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEE
Q 014603 174 DAVEALADE---NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTL 250 (422)
Q Consensus 174 ~~l~~~~~~---~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i 250 (422)
+.+++.+++ +++++++++|+||||.+++.+++++|+++|++||+++|+|++|..+.+++....++..+.. ++++++
T Consensus 154 ~~l~~~~~~~~~~~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~-~~~i~~ 232 (391)
T PRK07309 154 EMLEKAILEQGDKLKAVILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEYLP-DQTILI 232 (391)
T ss_pred HHHHHHhhccCCCeEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHhcc-CCEEEE
Confidence 999988753 5789999999999999999999999999999999999999999998886544444443332 579999
Q ss_pred ecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhhh-ccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHH
Q 014603 251 GSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQGAVPQILEKTEEEFFSKITDILRETADIC 329 (422)
Q Consensus 251 ~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l 329 (422)
+|+||.|+++|+|+||++++ +++++++...... ..+++.+.|.++..+|++.. .+....++.++++++.+
T Consensus 233 ~S~SK~~g~~GlRvG~~v~~--------~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~-~~~~~~~~~~~~~~~~~ 303 (391)
T PRK07309 233 NGLSKSHAMTGWRIGLIFAP--------AEFTAQLIKSHQYLVTAATTMAQFAAVEALTNGK-DDALPMKKEYIKRRDYI 303 (391)
T ss_pred ecChhhccCccceeEEEEeC--------HHHHHHHHHHHhhcccCCChHHHHHHHHHHhCCh-hHHHHHHHHHHHHHHHH
Confidence 99999999999999999986 4677877765432 34678889999999997632 33456677888999999
Q ss_pred HHHhhcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEeccChHHHHHH
Q 014603 330 CDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAVEPSALEDG 407 (422)
Q Consensus 330 ~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRis~~~~~~~l~~~ 407 (422)
.+.|+++ ++. +..|.+|+|+|++++... ..++.+++.++++++||.+.||..|+. ++++||+++.+.++++++
T Consensus 304 ~~~l~~~-~~~-~~~p~gg~~~~~~l~~~~---~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~ 378 (391)
T PRK07309 304 IEKMTDL-GFK-IIKPDGAFYIFAKIPAGY---NQDSFKFLQDFARKKAVAFIPGAAFGPYGEGYVRLSYAASMETIKEA 378 (391)
T ss_pred HHHHHHC-CCe-ecCCCeeEEEEEECCCCC---CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecCCHHHHHHH
Confidence 9999987 676 557888999999887431 014567777777888999999998865 579999999888999999
Q ss_pred HHHHHHHHHHhc
Q 014603 408 LGRMKAFYDRHA 419 (422)
Q Consensus 408 ~~~l~~~~~~~~ 419 (422)
+++|++++.++.
T Consensus 379 i~~l~~~~~~~~ 390 (391)
T PRK07309 379 MKRLKEYMEEHA 390 (391)
T ss_pred HHHHHHHHHhhc
Confidence 999999987653
No 46
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=2e-48 Score=371.74 Aligned_cols=364 Identities=21% Similarity=0.375 Sum_probs=294.6
Q ss_pred cCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhC-----------CCCCCCCCCCCCHHHHHHHHHHHhhcCC--CCC
Q 014603 42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRS-----------ARFNCYSSTVGILPARRAIADYLNRDLP--YKL 108 (422)
Q Consensus 42 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~-----------~~~~~y~~~~g~~~lr~~ia~~l~~~~~--~~~ 108 (422)
.++.++|+|+... |....+.+.+.+.+.... .....|.+..|.++||+++|+++++.++ .++
T Consensus 44 ~np~g~i~l~~ae-----N~l~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~~~~~~v 118 (447)
T PLN02607 44 HNPSGVIQMGLAE-----NQVSFDLLEEYLKQHPEASSWGGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGKARF 118 (447)
T ss_pred cCCCceEEEechh-----hhhhHHHHHHHHHhCchhhccccccccccchhhccCCCcchHHHHHHHHHHHHHhcCCCCCc
Confidence 5677799999987 345667788877765331 1223577888999999999999998665 358
Q ss_pred CCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHh-hCCCeEEEeeccCCCCcccCHHHHHHhhcC-----
Q 014603 109 SPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARAT-HSHLEVRHFDLLPAKGWEVDLDAVEALADE----- 182 (422)
Q Consensus 109 ~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~----- 182 (422)
++++|++|+|++++++.++.+++++||.|+++.|+|+++...+. ..|++++.++.+..+++.+|++.++++++.
T Consensus 119 ~p~~Ivit~G~t~al~~l~~~l~~pGD~Vlv~~P~Y~~f~~~~~~~~g~~vv~v~~~~~~~f~~~~~~le~a~~~a~~~~ 198 (447)
T PLN02607 119 DPDRIVLTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGVKIVPIHCDSSNNFQVTPQALEAAYQEAEAAN 198 (447)
T ss_pred CHHHeEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCcEEEEEeCCCCCCCcCCHHHHHHHHHHHHHhC
Confidence 89999999999999999999999999999999999999987666 578899888887666778999999987753
Q ss_pred -CceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCcccc----C--C-CCCeEEEecCc
Q 014603 183 -NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF----G--S-IVPVLTLGSIS 254 (422)
Q Consensus 183 -~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~----~--~-~~~~i~i~s~s 254 (422)
++++++++||+||||.++|.+++++|+++|+++|+++|+||+|..+.|++..+.++..+ + . .++++++.|+|
T Consensus 199 ~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~S 278 (447)
T PLN02607 199 IRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERVHIVYSLS 278 (447)
T ss_pred CCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcccHHHHHhhcCCCCCcCcEEEEEcch
Confidence 67899999999999999999999999999999999999999999888876544444322 1 1 35799999999
Q ss_pred cccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhhhccCcchHHHHHHHHHHhhch--HHHHHHHHHHHHHHHHHHHHH
Q 014603 255 KRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQGAVPQILEKTE--EEFFSKITDILRETADICCDR 332 (422)
Q Consensus 255 K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~~l~~~ 332 (422)
|.|+++|+|+||+++.+ +++...+.....+ ..++.+.|.++..+|++.. +.++.+.+++++++++.+.+.
T Consensus 279 K~fg~~GlRvG~ivs~n-------~~l~~~~~~~~~~-~~~s~~~q~~~~~~L~d~~~~~~~l~~~r~~l~~~~~~~~~~ 350 (447)
T PLN02607 279 KDLGLPGFRVGTIYSYN-------DKVVTTARRMSSF-TLVSSQTQHLLASMLSDEEFTENYIRTNRERLRKRYEMIVQG 350 (447)
T ss_pred hcCCCCcceEEEEEEcC-------HHHHHHHHHHhhc-CCCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999843 4566655544332 3567789999999998743 467788899999999999999
Q ss_pred hhcCCCCCCCCCCCCceEEEEecCccccc-CCCCHHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEec-cChHHHHHHH
Q 014603 333 LKEIPCITCPKKPEGSMFVMVKLNYSLLE-GINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFA-VEPSALEDGL 408 (422)
Q Consensus 333 L~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRis~~-~~~~~l~~~~ 408 (422)
|++. ++. +..+.+|+|+|++++..... ......++..+++++.||.|.||..|+. ++|+||+++ .+++.+++++
T Consensus 351 L~~~-gi~-~~~~~ag~fvw~~L~~~~~~~~~~~e~~l~~~ll~~~gV~v~pG~~f~~~~~g~fRi~fa~~~~~~l~~gl 428 (447)
T PLN02607 351 LRRA-GIE-CLKGNAGLFCWMNLSPLLETPTREGELALWDSILREVKLNISPGSSCHCSEPGWFRVCFANMSEDTLEVAL 428 (447)
T ss_pred HHhC-CCC-cccCCeeEEEEEEchHhhcCCCchhHHHHHHHHHHhCCEEEcCccccCCCCCCEEEEEeccCCHHHHHHHH
Confidence 9987 777 44788999999999642110 1112345666777778999999998865 789999999 4899999999
Q ss_pred HHHHHHHHHhcc
Q 014603 409 GRMKAFYDRHAK 420 (422)
Q Consensus 409 ~~l~~~~~~~~~ 420 (422)
++|.++++++++
T Consensus 429 ~Ri~~~l~~~~~ 440 (447)
T PLN02607 429 KRIHRFMDRRKT 440 (447)
T ss_pred HHHHHHHHHHHh
Confidence 999999987654
No 47
>PLN02231 alanine transaminase
Probab=100.00 E-value=4.4e-48 Score=375.09 Aligned_cols=384 Identities=22% Similarity=0.336 Sum_probs=301.6
Q ss_pred HHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhC--C-CCCCCCCCCCCHHHHHH
Q 014603 19 ELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRS--A-RFNCYSSTVGILPARRA 95 (422)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~--~-~~~~y~~~~g~~~lr~~ 95 (422)
.+.+.+++.+|+++... +.+++|+|+.+.+. +|. .++++..+.+.. + ....|++..|.+++|++
T Consensus 110 ~~~~~~~~~~r~v~~~~-------~~p~~i~~~~~~~~----fp~--~~i~~a~~~l~~~~~~~~~~Y~~s~G~~~lRea 176 (534)
T PLN02231 110 SLGQQPITFFREVLALC-------DHPSLLDKSETHGL----FSA--DAIERAWQILDQIPGRATGAYSHSQGIKGLRDA 176 (534)
T ss_pred HcCCCccHHHHHHHHhc-------cCCccCCCCCcccc----CCH--HHHHHHHHHHHhcCCccccCcCCCCCcHHHHHH
Confidence 34556667778877533 35688999865433 343 455555555554 2 35679999999999999
Q ss_pred HHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhc-CCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHH
Q 014603 96 IADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLA-RPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLD 174 (422)
Q Consensus 96 ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~-~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 174 (422)
|++++.+..|+.+++++|++|+|+++++..++++++ .+||.|+++.|+|+.|...+...|.+++.++++.+++|++|++
T Consensus 177 IA~~~~~r~g~~~~pe~I~iT~Ga~~ai~~~~~~l~~~~gd~Vli~~P~Y~~y~~~~~~~g~~~v~~~l~~~~~~~~d~~ 256 (534)
T PLN02231 177 IAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEKDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLEIS 256 (534)
T ss_pred HHHHHHhccCCCCCcccEEEeCCHHHHHHHHHHHhccCCCCEEEEeCCCChhHHHHHHHcCCEEEEEecCcccCCCCCHH
Confidence 999999888889999999999999999999999998 4799999999999999999999999999999977677899999
Q ss_pred HHHHhhcC------CceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccC-CCCCCCccccC-----
Q 014603 175 AVEALADE------NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFG-NTPFVPMGVFG----- 242 (422)
Q Consensus 175 ~l~~~~~~------~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~-~~~~~~~~~~~----- 242 (422)
+|++.+++ +++++++++|+||||.+++.+++++|+++|+++|++||+||+|..+.|+ +..+.++..+.
T Consensus 257 ~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~ 336 (534)
T PLN02231 257 ELKKQLEDARSKGITVRALVVINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGY 336 (534)
T ss_pred HHHHHHHHHhhcCCCeEEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCcccHHHHHhhhcc
Confidence 99988754 6788999999999999999999999999999999999999999999885 33443443321
Q ss_pred --CCCCeEEEecCcccc-CCCCceeEEEEeeCCCCcccchhHHHHHHhhhhhccCcchHHHHHHHHHHhhc-----h-HH
Q 014603 243 --SIVPVLTLGSISKRW-IVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQGAVPQILEKT-----E-EE 313 (422)
Q Consensus 243 --~~~~~i~i~s~sK~~-~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-----~-~~ 313 (422)
.+.++++++|+||.+ +.+|+|+||+++.+. .+++++++........+++...|.++..+++.. . +.
T Consensus 337 ~~~~~~vi~l~S~SK~~~g~pGlRiGy~~~~~~-----~~~l~~~l~k~~~~~~~s~~~~Q~~~~~~l~~p~~~~~~y~~ 411 (534)
T PLN02231 337 GEKDISLVSFQSVSKGYYGECGKRGGYMEVTGF-----TSDVREQIYKVASVNLCSNISGQILASLVMSPPKPGDESYES 411 (534)
T ss_pred ccCCceEEEEeccCcccccCCccceEEEEEecC-----CHHHHHHHHHHHhhhcCCChHHHHHHHHHhCCCCCCcchHHH
Confidence 123589999999975 789999999987421 156778777665544466778888888888531 1 22
Q ss_pred ---HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEec--Ccccc-----cCCCCHHHHHHHHHHhcCeEEec
Q 014603 314 ---FFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKL--NYSLL-----EGINSDMEFALKLAKEESVIVLP 383 (422)
Q Consensus 314 ---~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~--~~~~~-----~~~~~~~~~~~~l~~~~gi~v~~ 383 (422)
+....++.++++++.+.+.|++++++. +..|++|+|+|.++ +.... .+...+..++.+++++.||.+.|
T Consensus 412 ~~~~~~~i~~~~~~r~~~l~~~L~~~~gi~-~~~p~Ggfylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvP 490 (534)
T PLN02231 412 YMAEKDGILSSLARRAKTLEDALNSLEGVT-CNKAEGAMYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVP 490 (534)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCce-ecCCCeeeEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeC
Confidence 233457889999999999999998888 55899999999555 32110 00112334556788888999999
Q ss_pred CCCCCC---CCeEEEEeccChHHHHHHHHHHHHHHHHhccc
Q 014603 384 GITVGL---KDWLRITFAVEPSALEDGLGRMKAFYDRHAKK 421 (422)
Q Consensus 384 g~~~~~---~~~iRis~~~~~~~l~~~~~~l~~~~~~~~~~ 421 (422)
|..|+. ..++|+++..+++++++++++|.++++++-+|
T Consensus 491 Gs~Fg~~~g~~~~Rit~~~~~e~l~eal~RL~~~~~~~~~~ 531 (534)
T PLN02231 491 GSGFGQVPGTWHFRCTILPQEDKIPAIVSRLTEFHKSFMDE 531 (534)
T ss_pred CcccCCCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999985 34699999999999999999999998876543
No 48
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=100.00 E-value=3.8e-48 Score=369.72 Aligned_cols=359 Identities=18% Similarity=0.228 Sum_probs=287.9
Q ss_pred HHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCC----CCCCCCCCCCCHHHHHHHHHHHhhcCC
Q 014603 30 GVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSA----RFNCYSSTVGILPARRAIADYLNRDLP 105 (422)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~----~~~~y~~~~g~~~lr~~ia~~l~~~~~ 105 (422)
++.++..+......+.++++|+.|++. +++++.+.+++.+.+... ....|++..|.++||+++++++.+.+|
T Consensus 19 ~~~~~~~~~~~~~~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g 94 (409)
T PRK07590 19 EIARRVNAFREANPEAKIIRLGIGDVT----QPLPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARG 94 (409)
T ss_pred HHHHHHHHHhhhcCCCceEEecCcCCC----CCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 344444444333346789999999966 577888999998887642 345798889999999999999988888
Q ss_pred CCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCe-----------EEEeeccCCCCcccCHH
Q 014603 106 YKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLE-----------VRHFDLLPAKGWEVDLD 174 (422)
Q Consensus 106 ~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~-----------~~~~~~~~~~~~~~d~~ 174 (422)
+++++++|++|+|+++++..+. .++.+||+|++++|+|+.+...++..|.. ++.++++.++++..|.+
T Consensus 95 ~~~~~~~I~it~Ga~~al~~l~-~~~~~gd~V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~ 173 (409)
T PRK07590 95 CDISADEIFISDGAKCDTGNIL-DIFGPDNTIAVTDPVYPVYVDTNVMAGRTGEANEDGRYSGIVYLPCTAENNFVPELP 173 (409)
T ss_pred CcCChhhEEECCCHHHHHHHHH-HhcCCCCEEEEeCCCCcchHHHHHHcCCcccccccccccceeEeecccccCCcccCc
Confidence 8999999999999999999865 45689999999999999999999999986 78888765555555532
Q ss_pred HHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCC-CCCeEEEecC
Q 014603 175 AVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IVPVLTLGSI 253 (422)
Q Consensus 175 ~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~-~~~~i~i~s~ 253 (422)
.++++++++++|+||||.+++.+++++|+++|+++|++||+||+|..+.+++....++..++. .+++++++||
T Consensus 174 ------~~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~~~Sf 247 (409)
T PRK07590 174 ------EEKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIEGARECAIEFRSF 247 (409)
T ss_pred ------ccCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCcchhhCCCcccceEEEecC
Confidence 257899999999999999999999999999999999999999999998776543344444443 2468999999
Q ss_pred ccccCCCCceeEEEEeeCCCCcccchhHHHH------------HHhhhh-hccCcchHHHHHHHHHHhhchHHHHHHHHH
Q 014603 254 SKRWIVPGWRLGWLVTSDPNGILQDSGIVDS------------IKSFLN-ISSDPATFIQGAVPQILEKTEEEFFSKITD 320 (422)
Q Consensus 254 sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~------------~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 320 (422)
||.|++||+|+||++++ +++++. +..... ...+++.+.|.++..++......++++.++
T Consensus 248 SK~~~~pGlRiG~~i~~--------~~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~ 319 (409)
T PRK07590 248 SKTAGFTGTRCAYTVVP--------KELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSPEGKAQIKELID 319 (409)
T ss_pred ccccCCcCceeEEEEcC--------HHHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcCCcHHHHHHHHH
Confidence 99999999999999986 345542 111111 123567889999988887534578888999
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEec
Q 014603 321 ILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFA 398 (422)
Q Consensus 321 ~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRis~~ 398 (422)
.++++++.+.+.|+++ ++. +..|.+|+|+|++++.. .++.++...+++++||.+.||..|+. .+++||++.
T Consensus 320 ~~~~~r~~l~~~L~~~-~~~-~~~~~g~~f~wi~~~~~-----~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~ 392 (409)
T PRK07590 320 YYMENAKIIREGLESA-GFE-VYGGVNAPYIWVKTPDG-----MSSWDFFDKLLQEANVVGTPGSGFGPSGEGYFRLSAF 392 (409)
T ss_pred HHHHHHHHHHHHHHhc-CCc-eecCCcceEEEEECCCC-----CCHHHHHHHHHHHCCEEEeChhHhCCCCCCEEEEEcc
Confidence 9999999999999997 666 44678899999999752 24667777787788999999998865 469999987
Q ss_pred cChHHHHHHHHHHHHH
Q 014603 399 VEPSALEDGLGRMKAF 414 (422)
Q Consensus 399 ~~~~~l~~~~~~l~~~ 414 (422)
.+++++++++++|.++
T Consensus 393 ~~~~~l~~~l~rl~~~ 408 (409)
T PRK07590 393 GSRENVLEAMERIKKA 408 (409)
T ss_pred CCHHHHHHHHHHHHhh
Confidence 7889999999999875
No 49
>PRK09082 methionine aminotransferase; Validated
Probab=100.00 E-value=4.9e-48 Score=366.38 Aligned_cols=370 Identities=21% Similarity=0.320 Sum_probs=305.9
Q ss_pred cHHHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHH
Q 014603 17 NEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAI 96 (422)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~i 96 (422)
+.|+...+.+.++...... ++.++|+|+.|.|+ ++.++.+.+++.+.+... ...|++..|.+++|+++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~-------~~~~~i~l~~g~~~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~~ 76 (386)
T PRK09082 9 QSKLPNVGTTIFTVMSALA-------AEHGAINLSQGFPD----FDGPPYLVEALAYAMAAG-HNQYPPMTGVAALREAI 76 (386)
T ss_pred hhHhhccCccHHHHHHHHH-------hhCCEEEecCCCCC----CCCCHHHHHHHHHHHHcC-CCCCCCCCCcHHHHHHH
Confidence 4466666655444443322 34678999999866 566788999998877653 45798889999999999
Q ss_pred HHHHhhcCCCCCCCC-CEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHH
Q 014603 97 ADYLNRDLPYKLSPD-DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDA 175 (422)
Q Consensus 97 a~~l~~~~~~~~~~~-~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~ 175 (422)
++++.+.++...+++ +|++|+|+++++..++.+++++||+|+++.|+|..+...++..|.+++.++++. .++.+|++.
T Consensus 77 a~~l~~~~~~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~ 155 (386)
T PRK09082 77 AAKTARLYGRQYDADSEITVTAGATEALFAAILALVRPGDEVIVFDPSYDSYAPAIELAGGRAVRVALQP-PDFRVDWQR 155 (386)
T ss_pred HHHHHHHhCCCCCCCCcEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCc-ccccCCHHH
Confidence 999988777776665 899999999999999999999999999999999999999999999999999864 357899999
Q ss_pred HHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCC-CCCeEEEecCc
Q 014603 176 VEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IVPVLTLGSIS 254 (422)
Q Consensus 176 l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~-~~~~i~i~s~s 254 (422)
+++.++++++++++++|+||||.+++.+++++|+++|+++|+++|+||+|..+.+++....++..+.. .+++++++|||
T Consensus 156 l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~S 235 (386)
T PRK09082 156 FAAAISPRTRLIILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFG 235 (386)
T ss_pred HHHhcCccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeech
Confidence 99998888999999999999999999999999999999999999999999998886544444444332 46799999999
Q ss_pred cccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhh-hccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHh
Q 014603 255 KRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRL 333 (422)
Q Consensus 255 K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L 333 (422)
|.|+++|+|+||++++ +++++.+..... ...+++.+.|.++..+++. .+.++++.++.++++++.+.+.|
T Consensus 236 K~~~~~G~RiG~iv~~--------~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L 306 (386)
T PRK09082 236 KTYHVTGWKVGYCVAP--------AALSAEFRKVHQYNTFTVNTPAQLALADYLRA-EPEHYLELPAFYQAKRDRFRAAL 306 (386)
T ss_pred hhccchhhhhhhhhCC--------HHHHHHHHHHHhhhcCCCChHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999986 468888877653 3456788899998888863 35778888899999999999999
Q ss_pred hcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC----CCeEEEEeccChHHHHHHHH
Q 014603 334 KEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL----KDWLRITFAVEPSALEDGLG 409 (422)
Q Consensus 334 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~----~~~iRis~~~~~~~l~~~~~ 409 (422)
++. ++. +..+.+|+|+|++++.. .+ .++.++...+++++||.+.||..|+. .+++|++++.++++++++++
T Consensus 307 ~~~-~~~-~~~~~g~~~~~~~~~~~--~~-~~~~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~Ri~~~~~~~~l~~~~~ 381 (386)
T PRK09082 307 ANS-RFK-LLPCEGTYFQLVDYSAI--SD-LDDVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRLCFAKQEETLDAAAE 381 (386)
T ss_pred HhC-CCc-ccCCCeeEEEEEecccc--CC-CCHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEEEEecCCHHHHHHHHH
Confidence 986 677 54788899999998631 11 25677888888889999999997743 47999999988999999999
Q ss_pred HHHH
Q 014603 410 RMKA 413 (422)
Q Consensus 410 ~l~~ 413 (422)
+|++
T Consensus 382 rl~~ 385 (386)
T PRK09082 382 RLCQ 385 (386)
T ss_pred HHhh
Confidence 9875
No 50
>PRK07777 aminotransferase; Validated
Probab=100.00 E-value=3.1e-47 Score=361.49 Aligned_cols=371 Identities=25% Similarity=0.409 Sum_probs=305.3
Q ss_pred HHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHH
Q 014603 19 ELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIAD 98 (422)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~ 98 (422)
+++.++.+.++.+...+ ...+++||+.|.|+. +.++.+.+++.+.+... ...|++..|.+++|+++++
T Consensus 5 ~~~~~~~~~~~~~~~~~-------~~~~~i~l~~g~p~~----~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~ 72 (387)
T PRK07777 5 RLRPFGTTIFAEMSALA-------VRTGAVNLGQGFPDE----DGPPEMLEAAQEAIAGG-VNQYPPGPGIPELRAAIAA 72 (387)
T ss_pred hhhhcCccHHHHHHHHH-------hhCCeEEccCCCCCC----CCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHH
Confidence 56777777777777655 235789999999773 44567788877776543 4679988999999999999
Q ss_pred HHhhcCCCCCCCC-CEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCC-CCcccCHHHH
Q 014603 99 YLNRDLPYKLSPD-DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPA-KGWEVDLDAV 176 (422)
Q Consensus 99 ~l~~~~~~~~~~~-~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~~~l 176 (422)
++.+.+|..++++ +|++|+|+++++.+++.+++++||+|+++.|+|+.+...++..|..++.++.++. .++.+|++++
T Consensus 73 ~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l 152 (387)
T PRK07777 73 QRRRRYGLEYDPDTEVLVTVGATEAIAAAVLGLVEPGDEVLLIEPYYDSYAAVIAMAGAHRVPVPLVPDGRGFALDLDAL 152 (387)
T ss_pred HHHHHhCCCCCCCCcEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHCCCEEEEeecCCccCCCcCCHHHH
Confidence 9988788777776 7999999999999999999999999999999999999999999999998988765 3677999999
Q ss_pred HHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCC-CCCeEEEecCcc
Q 014603 177 EALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IVPVLTLGSISK 255 (422)
Q Consensus 177 ~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~-~~~~i~i~s~sK 255 (422)
++.++++++++++++|+||||.+++.+++++|+++|+++++++|+||+|..+.+.+....++..+.. .++++++.||||
T Consensus 153 ~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK 232 (387)
T PRK07777 153 RAAVTPRTRALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAK 232 (387)
T ss_pred HHhcCcccEEEEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechh
Confidence 9988888999999999999999999999999999999999999999999988876544334444332 457899999999
Q ss_pred ccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhhh-ccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhh
Q 014603 256 RWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLK 334 (422)
Q Consensus 256 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~ 334 (422)
.|+++|+|+||++++ +++++.+...... ....+.+.|.++..++... +.++++.++.++++++.+.+.|+
T Consensus 233 ~~g~~GlRiG~~~~~--------~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~ 303 (387)
T PRK07777 233 TFNVTGWKIGWACGP--------APLIAAVRAAKQYLTYVGGAPFQPAVAHALDHE-DAWVAALRDSLQAKRDRLAAGLA 303 (387)
T ss_pred hccCcCceeEEEecC--------HHHHHHHHHHHhhcccCCCCHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999986 4677777765542 3355677888888888643 57788888999999999999999
Q ss_pred cCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC-----CCeEEEEeccChHHHHHHHH
Q 014603 335 EIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL-----KDWLRITFAVEPSALEDGLG 409 (422)
Q Consensus 335 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~-----~~~iRis~~~~~~~l~~~~~ 409 (422)
++ ++. +..|.+++|+|++++.. +..++.+++..+++++||.|.||..|+. ++++||+++.++++++++++
T Consensus 304 ~~-~~~-~~~~~g~~~~~~~~~~~---~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~~~~~~~~l~~~l~ 378 (387)
T PRK07777 304 EA-GFE-VHDSAGTYFLCADPRPL---GYDDGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFAFCKRDDTLDEAIR 378 (387)
T ss_pred hC-CCC-ccCCCcceEEEeccccc---CCCCHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEEecCCHHHHHHHHH
Confidence 97 676 44778899999887531 1125678888887788999999987753 46899999988999999999
Q ss_pred HHHHHH
Q 014603 410 RMKAFY 415 (422)
Q Consensus 410 ~l~~~~ 415 (422)
+|.++.
T Consensus 379 ~l~~~~ 384 (387)
T PRK07777 379 RLRALR 384 (387)
T ss_pred HHHHHh
Confidence 998764
No 51
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=8.4e-48 Score=370.37 Aligned_cols=363 Identities=20% Similarity=0.359 Sum_probs=290.1
Q ss_pred cCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhC-----------CCCCCCCCCCCCHHHHHHHHHHHhhcCC--CCC
Q 014603 42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRS-----------ARFNCYSSTVGILPARRAIADYLNRDLP--YKL 108 (422)
Q Consensus 42 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~-----------~~~~~y~~~~g~~~lr~~ia~~l~~~~~--~~~ 108 (422)
.++.++|+|+.+... ++ .+.+.+.+.+.... .....|++..|.++||++||+++++.++ ..+
T Consensus 35 ~~p~g~i~L~~~En~----l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~v 109 (468)
T PLN02450 35 KNPSGIIQMGLAENQ----LS-FDLIESWLAKNPDAAGLKRNGQSIFRELALFQDYHGLPAFKNALAEFMSEIRGNKVTF 109 (468)
T ss_pred cCCCeeEEeehhHhH----hh-HHHHHHHHHhCchhhhcccccccchhhhhcCCCCCChHHHHHHHHHHHHHhhCCCCCc
Confidence 345679999999844 23 35666665543210 1234688888999999999999987665 347
Q ss_pred CCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHh-hCCCeEEEeeccCCCCcccCHHHHHHhhcC-----
Q 014603 109 SPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARAT-HSHLEVRHFDLLPAKGWEVDLDAVEALADE----- 182 (422)
Q Consensus 109 ~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~----- 182 (422)
++++|++|+|+++++..++.+++++||.|++++|+|..+...+. ..|++++.++.+.++++.+|++.+++.+.+
T Consensus 110 ~~~~Iiit~Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~~~~~le~~~~~~~~~~ 189 (468)
T PLN02450 110 DPNKLVLTAGATSANETLMFCLAEPGDAFLLPTPYYPGFDRDLKWRTGVEIVPIHCSSSNGFQITESALEEAYQQAQKLN 189 (468)
T ss_pred ChHHeEEccChHHHHHHHHHHhCCCCCEEEECCCCCCchHHHHhhcCCcEEEEEecCCccCCcCCHHHHHHHHHHHHhcC
Confidence 89999999999999999999999999999999999999987777 589999999887667788899999887643
Q ss_pred -CceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCcccc---------CCCCCeEEEec
Q 014603 183 -NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF---------GSIVPVLTLGS 252 (422)
Q Consensus 183 -~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~---------~~~~~~i~i~s 252 (422)
+++++++++|+||||.+++.+++++|+++|+++|++||+||+|+.+.|++..+.++... +..+++++++|
T Consensus 190 ~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S 269 (468)
T PLN02450 190 LKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYS 269 (468)
T ss_pred CCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCCCCcccHHHHhhhcccccCCCCCcEEEEEe
Confidence 68899999999999999999999999999999999999999999888876443332211 12467999999
Q ss_pred CccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhhhccCcchHHHHHHHHHHhhch--HHHHHHHHHHHHHHHHHHH
Q 014603 253 ISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQGAVPQILEKTE--EEFFSKITDILRETADICC 330 (422)
Q Consensus 253 ~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~~l~ 330 (422)
|||.|+++|+|+||+++++ +.+.+.+..... ....+.+.|.++..+|++.. ..++++.+++++++++.+.
T Consensus 270 ~SK~~~l~GlRiG~li~~~-------~~l~~~~~~~~~-~~~~s~~~Q~a~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~ 341 (468)
T PLN02450 270 LSKDLGLPGFRVGAIYSND-------EMVVSAATKMSS-FGLVSSQTQYLLSALLSDKKFTKNYLEENQKRLKQRQKKLV 341 (468)
T ss_pred ccccCCCCCccEEEEEECC-------HHHHHHHHHHhh-cCCCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999863 234555554432 23567899999999998743 3478888999999999999
Q ss_pred HHhhcCCCCCCCCCCCCceEEEEecCccccc-CCCCHHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEec-cChHHHHH
Q 014603 331 DRLKEIPCITCPKKPEGSMFVMVKLNYSLLE-GINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFA-VEPSALED 406 (422)
Q Consensus 331 ~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRis~~-~~~~~l~~ 406 (422)
+.|+++ ++. +..|.+|+|+|++++..... ......++...++++.||.+.||..|+. .+|+||+++ .+++++++
T Consensus 342 ~~L~~~-gi~-~~~~~~g~flwi~l~~~~~~~~~~~~~~l~~~ll~~~gV~v~PG~~f~~~~~g~~Rl~f~~~~~~~l~~ 419 (468)
T PLN02450 342 SGLEAA-GIK-CLKSNAGLFCWVDMRHLLKSNTFEAEMELWKKIVYEVKLNISPGSSCHCTEPGWFRVCFANMSEETLDL 419 (468)
T ss_pred HHHHHc-CCc-ccCCCceEEEEEEchHhcCcCCchHHHHHHHHHHHhCCEEEeCccccCCCCCCEEEEEecCCCHHHHHH
Confidence 999998 777 55788999999998642110 1112345677777888999999998865 689999999 58999999
Q ss_pred HHHHHHHHHHHhc
Q 014603 407 GLGRMKAFYDRHA 419 (422)
Q Consensus 407 ~~~~l~~~~~~~~ 419 (422)
++++|++++.+..
T Consensus 420 ~l~ri~~~l~~~~ 432 (468)
T PLN02450 420 AMKRLKSFVESDS 432 (468)
T ss_pred HHHHHHHHHHhcc
Confidence 9999999987654
No 52
>PRK05839 hypothetical protein; Provisional
Probab=100.00 E-value=4.1e-47 Score=358.01 Aligned_cols=339 Identities=23% Similarity=0.368 Sum_probs=279.1
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 122 (422)
.+.++++|+.|.|. +++++.+.+++.+... ....|++..|.+++|+++++++++.+|.++++++|++|+|++++
T Consensus 22 ~~~~~i~l~~~~p~----~~~~~~~~~a~~~~~~--~~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~~~I~it~G~~~a 95 (374)
T PRK05839 22 KEYKGLDLTIGEPQ----FETPKFIQDALKNNAH--LLNKYPKSAGEESLREAQRGFFKRRFKIELKENELIPTFGTREV 95 (374)
T ss_pred CCCCeEEcCCCCCC----CCCCHHHHHHHHHHhh--ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHH
Confidence 36799999999966 5677889998887653 35689998999999999999999888888999999999999999
Q ss_pred HHHHHHHhc--CCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCccccc
Q 014603 123 IEVILTVLA--RPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVY 200 (422)
Q Consensus 123 ~~~~~~~l~--~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~ 200 (422)
+..++.+++ ++||.|+++.|+|..+...++..|++++.++.+.++++.+|.+..+ + ++++++++++||||||.++
T Consensus 96 l~~~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~~~--~-~~~k~v~i~nP~NPTG~~~ 172 (374)
T PRK05839 96 LFNFPQFVLFDKQNPTIAYPNPFYQIYEGAAIASRAKVLLMPLTKENDFTPSLNEKE--L-QEVDLVILNSPNNPTGRTL 172 (374)
T ss_pred HHHHHHHHhcCCCCCEEEECCCCchhhHHHHHhcCCEEEEeecccccCCcCCcchhh--h-ccccEEEEeCCCCCcCccc
Confidence 999888764 5789999999999999999999999999999876666766655432 2 3689999999999999999
Q ss_pred CHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCcccc------CCCCCeEEEecCccccCCCCceeEEEEeeCCCC
Q 014603 201 TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF------GSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNG 274 (422)
Q Consensus 201 ~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~------~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~ 274 (422)
+.+++++|+++|+++|++||+||+|..+.+++. ..++... ...+++++++||||.|++||+|+||++++
T Consensus 173 s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~-~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~ii~~---- 247 (374)
T PRK05839 173 SLEELIEWVKLALKHDFILINDECYSEIYENTP-PPSLLEASILVGNESFKNVLVINSISKRSSAPGLRSGFIAGD---- 247 (374)
T ss_pred CHHHHHHHHHHHHHcCCEEEeccchhhcccCCC-CCCHhhhhcccCccccCcEEEEeccccccCCccceeEEEecC----
Confidence 999999999999999999999999998754332 2222211 12358999999999999999999999985
Q ss_pred cccchhHHHHHHhhhhh-ccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEE
Q 014603 275 ILQDSGIVDSIKSFLNI-SSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMV 353 (422)
Q Consensus 275 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~ 353 (422)
+++++++...... ..+.+.+.|.++..++.. +.++++.++.++++++.+.+.| ++. .|.+|+|+|+
T Consensus 248 ----~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~l----~~~---~p~gg~fi~~ 314 (374)
T PRK05839 248 ----ASILKKYKAYRTYLGCASPLPLQKAAAVAWLD--DEHAEFFRNIYAKNLKLAREIL----GIT---IPPATFYVWL 314 (374)
T ss_pred ----HHHHHHHHHHHhhcCCCCChHHHHHHHHHhcc--chHHHHHHHHHHHHHHHHHHhc----CCC---CCCeeEEEEE
Confidence 4678877766532 345677788888877754 5778888888989888887765 332 6788999999
Q ss_pred ecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC----CCeEEEEeccChHHHHHHHHHHHHHHH
Q 014603 354 KLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL----KDWLRITFAVEPSALEDGLGRMKAFYD 416 (422)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~----~~~iRis~~~~~~~l~~~~~~l~~~~~ 416 (422)
+++ +..++..++++++||.|.||..|+. .+++|||++.+++++++++++|+++++
T Consensus 315 ~~~--------~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~~~iRis~~~~~~~~~~~l~~l~~~l~ 373 (374)
T PRK05839 315 PVD--------NDEEFTKKLYQNEGIKVLPGSFLGRNGIGKGYVRIALVYDTPKLEKALEIIKTYLE 373 (374)
T ss_pred eCC--------ChHHHHHHHHHHCCEEEeCchhhCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHhh
Confidence 986 3567777777778999999987764 489999999889999999999999875
No 53
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=3.2e-47 Score=367.28 Aligned_cols=362 Identities=20% Similarity=0.352 Sum_probs=285.6
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhC-----------CCCCCCCCCCCCHHHHHHHHHHHhhcCC--CCCC
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRS-----------ARFNCYSSTVGILPARRAIADYLNRDLP--YKLS 109 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~-----------~~~~~y~~~~g~~~lr~~ia~~l~~~~~--~~~~ 109 (422)
++.++|+|+.+. |....+.+.+.+.+.... .....|++..|.+++|++||+++++.+| +.++
T Consensus 44 np~g~i~l~~aE-----N~l~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~g~~v~v~ 118 (496)
T PLN02376 44 NPHGIIQMGLAE-----NQLCLDLIKDWVKENPEASICTLEGIHQFSDIANFQDYHGLKKFRQAIAHFMGKARGGKVTFD 118 (496)
T ss_pred CCCceEEeecch-----hhhhHHHHHHHHHhCchhhccccccccccchhhccCCCCCcHHHHHHHHHHHHHHhCCCCcCC
Confidence 355799999987 212234444444433211 1234688889999999999999998776 5689
Q ss_pred CCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHh-hCCCeEEEeeccCCCCcccCHHHHHHhh------cC
Q 014603 110 PDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARAT-HSHLEVRHFDLLPAKGWEVDLDAVEALA------DE 182 (422)
Q Consensus 110 ~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~d~~~l~~~~------~~ 182 (422)
+++|++|+|+++++..++.++++|||.|++++|+|+++...+. ..|++++.++++.++++++|++.+++.+ ..
T Consensus 119 pe~Ivit~Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~~~~~~~~~~G~~vv~v~~~~~~~~~~~~~~le~a~~~a~~~~~ 198 (496)
T PLN02376 119 PERVVMSGGATGANETIMFCLADPGDVFLIPSPYYAAFDRDLRWRTGVEIIPVPCSSSDNFKLTVDAADWAYKKAQESNK 198 (496)
T ss_pred hhhEEEccchHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhhCCCEEEEEeCCCCccCcCCHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999999999988777 5899999999876667889999987642 23
Q ss_pred CceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCcccc----CC---C-CCeEEEecCc
Q 014603 183 NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF----GS---I-VPVLTLGSIS 254 (422)
Q Consensus 183 ~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~----~~---~-~~~i~i~s~s 254 (422)
+++++++++|+||||.+++.+++++|+++|+++|++||+||+|..+.|++..+.++..+ +. + ++++++.|||
T Consensus 199 ~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~S 278 (496)
T PLN02376 199 KVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLS 278 (496)
T ss_pred CeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCcccHHHhhccccccccCCCeEEEEEecc
Confidence 67889999999999999999999999999999999999999999988876555554333 11 1 3467799999
Q ss_pred cccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhhhccCcchHHHHHHHHHHhhch--HHHHHHHHHHHHHHHHHHHHH
Q 014603 255 KRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQGAVPQILEKTE--EEFFSKITDILRETADICCDR 332 (422)
Q Consensus 255 K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~~l~~~ 332 (422)
|.|++||+|+||+++++ +.+...+..... .+..+.+.|.++..+|++.. +.++.+.+++++++++.+.+.
T Consensus 279 K~~glpGlRvG~li~~~-------~~l~~~~~~~~~-~~~vs~~~Q~a~~~~L~d~~~~~~~l~~~r~~l~~r~~~l~~~ 350 (496)
T PLN02376 279 KDMGLPGFRVGIVYSFN-------DSVVSCARKMSS-FGLVSSQTQLMLASMLSDDQFVDNFLMESSRRLGIRHKVFTTG 350 (496)
T ss_pred ccCCCCcceEEEEEECC-------HHHHHHHHHHhh-cCCCCHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999853 345555444332 33578899999999998633 456677788999999999999
Q ss_pred hhcCCCCCCCCCCCCceEEEEecCcccc--cCCCCHHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEec-cChHHHHHH
Q 014603 333 LKEIPCITCPKKPEGSMFVMVKLNYSLL--EGINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFA-VEPSALEDG 407 (422)
Q Consensus 333 L~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRis~~-~~~~~l~~~ 407 (422)
|++. ++. +..|.+|+|+|++++.... ....+..++...++++.||.+.||..|+. ++|+|||++ .++++++++
T Consensus 351 L~~~-gi~-~~~~~aG~flwi~l~~~~~~~~~~~~e~~l~~~ll~~~gV~v~pGs~F~~~~~g~~Ri~fa~~~~~~l~~a 428 (496)
T PLN02376 351 IKKA-DIA-CLTSNAGLFAWMDLRHLLRDRNSFESEIELWHIIIDKVKLNVSPGSSFRCTEPGWFRICFANMDDDTLHVA 428 (496)
T ss_pred HHHC-CCc-ccCCCceEEEEEEchhhhccCCchhHHHHHHHHHHHcCCEEEeCccccCCCCCCEEEEEeeCCCHHHHHHH
Confidence 9987 777 4478889999999964211 01112356777777778999999999864 689999999 588999999
Q ss_pred HHHHHHHHHHhc
Q 014603 408 LGRMKAFYDRHA 419 (422)
Q Consensus 408 ~~~l~~~~~~~~ 419 (422)
+++|++++.+..
T Consensus 429 l~rl~~~l~~~~ 440 (496)
T PLN02376 429 LGRIQDFVSKNK 440 (496)
T ss_pred HHHHHHHHHHhh
Confidence 999999997654
No 54
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=100.00 E-value=7e-47 Score=353.97 Aligned_cols=341 Identities=24% Similarity=0.408 Sum_probs=287.0
Q ss_pred ceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCC-CEEEecCHHHHHHH
Q 014603 47 LIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPD-DVYLTLGCTQAIEV 125 (422)
Q Consensus 47 ~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~i~~~~g~~~a~~~ 125 (422)
+++|+.|+|. +++++.+.+++.+... ....|+++.|.+++|+++++++.+.+|++++++ +|++|+|+++++..
T Consensus 2 ~~~~~~g~p~----~~~~~~~~~~~~~~~~--~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~ 75 (350)
T TIGR03537 2 LFDFGTGDPK----EPTPPFIRKALIDAVP--EVSQYPSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFH 75 (350)
T ss_pred eEeccCCCCC----CCCCHHHHHHHHHHHh--ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHH
Confidence 5899999965 5778899999988764 356799889999999999999998888888898 99999999999999
Q ss_pred HHHHhcCCC---CEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCH
Q 014603 126 ILTVLARPG---ANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTY 202 (422)
Q Consensus 126 ~~~~l~~~g---d~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~ 202 (422)
++.+++++| |+|+++.|+|..+...++..|.+++.++.++++++.+|++.+++.++++++++++++|+||||.+++.
T Consensus 76 ~~~~~~~~g~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~~ 155 (350)
T TIGR03537 76 FPLVFIDPEEDRRRVIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSILEETKIVWINYPHNPTGATAPR 155 (350)
T ss_pred HHHHHcCCCCCCceEEEcCCCCcchHHHHHhcCCEEEEcccCcccCCccCHHHHHHhhhhccEEEEEeCCCCCcCcccCH
Confidence 999999887 69999999999999999999999999998766677889999999888889999999999999999999
Q ss_pred HHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHH
Q 014603 203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIV 282 (422)
Q Consensus 203 ~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 282 (422)
+++++|+++|+++|+++|+||+|..+.+++ ...++..++ .+++++++|+||.++++|+|+||++++ +++.
T Consensus 156 ~~~~~l~~~a~~~~~~ii~De~y~~~~~~~-~~~~~~~~~-~~~~i~~~s~SK~~g~~GlRiG~~~~~--------~~~~ 225 (350)
T TIGR03537 156 SYLKETIAMCREHGIILCSDECYTEIYFGE-PPHSALEVG-IENVLAFHSLSKRSGMTGYRSGFVAGD--------EKLI 225 (350)
T ss_pred HHHHHHHHHHHHcCcEEEEeccccccccCC-CCCchhhcC-cCCEEEEeecccccCCccccceeeecC--------HHHH
Confidence 999999999999999999999999876644 222333333 357999999999999999999999875 4677
Q ss_pred HHHHhhhhh-ccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCccccc
Q 014603 283 DSIKSFLNI-SSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLE 361 (422)
Q Consensus 283 ~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 361 (422)
+++...... ..+++.+.|.++.+++.. +.++++.++.++++++.+.+.|++. ++. +..|.+|+|+|+.++..
T Consensus 226 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~r~~l~~~~~~~~~~l~~~-g~~-~~~~~g~~~~~~~~~~~--- 298 (350)
T TIGR03537 226 SFLRKLRANFGVASPDFVQAAAKAAWSD--DNHVLERRKIFKRKRDLFIEFFNKV-GLE-YLYPDATFYLWVKVPSG--- 298 (350)
T ss_pred HHHHHHHHhhccCCCHHHHHHHHHHhCC--cHHHHHHHHHHHHHHHHHHHHHHHC-CCc-ccCCCeEEEEEEECCCC---
Confidence 777776543 234455677877777764 4677888899999999999999987 676 55788899999998742
Q ss_pred CCCCHHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEeccChHHHHHHHHHHHH
Q 014603 362 GINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAVEPSALEDGLGRMKA 413 (422)
Q Consensus 362 ~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRis~~~~~~~l~~~~~~l~~ 413 (422)
.++.++...+++ +||.|.||..|+. .+++||+++.+++++++++++|++
T Consensus 299 --~~~~~l~~~L~~-~gv~v~~g~~f~~~~~~~~Ri~~~~~~~~~~~~l~~~~~ 349 (350)
T TIGR03537 299 --IDAKDYALRLLE-NGIVVAPGENFGSGEEGYVRVALVPTLEECEEALRLWER 349 (350)
T ss_pred --CCHHHHHHHHHH-CCEEEcCchhhCCCCCCEEEEEecCCHHHHHHHHHHHhc
Confidence 246677777755 6999999998865 589999998788999999999875
No 55
>PRK08175 aminotransferase; Validated
Probab=100.00 E-value=3.9e-46 Score=354.48 Aligned_cols=356 Identities=20% Similarity=0.353 Sum_probs=294.6
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCC-CEEEecCHHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPD-DVYLTLGCTQ 121 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~i~~~~g~~~ 121 (422)
.+.++++|+.|.|. ...++.+.+++.+.+.......|++..|.+++|+++++++.+.+|+.++++ ++++|+|+++
T Consensus 27 ~~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~ 102 (395)
T PRK08175 27 RGEDIIDFSMGNPD----GPTPPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKE 102 (395)
T ss_pred cCCCeEEcCCCCCC----CCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHH
Confidence 36889999999876 345677888888777655567899999999999999999998888888887 7999999999
Q ss_pred HHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhc---CCceEEEEeCCCCCccc
Q 014603 122 AIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALAD---ENTVALVIINPGNPCGN 198 (422)
Q Consensus 122 a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~---~~~~~i~i~~p~nptG~ 198 (422)
+++.++..++++||+|++++|+|..+...++..|.+++.++.+.+++ +.+.+++.++ ++++++++++|+||||.
T Consensus 103 ~l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~---~~~~l~~~l~~~~~~~~~v~i~~p~NPtG~ 179 (395)
T PRK08175 103 GLAHLMLATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGVD---FFNELERAIRESYPKPKMMILGFPSNPTAQ 179 (395)
T ss_pred HHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCeEEEEecccCCC---cHHHHHHHHhhccCCceEEEEeCCCCCCCC
Confidence 99999999999999999999999998888889999999998865433 4677777665 36888999999999999
Q ss_pred ccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCC-CCCeEEEecCccccCCCCceeEEEEeeCCCCccc
Q 014603 199 VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQ 277 (422)
Q Consensus 199 ~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~-~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~ 277 (422)
+++.+++++|+++|+++|++||+||+|..+.+++....++..+.. .+++++++||||.|++||+|+||++++
T Consensus 180 ~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~~~------- 252 (395)
T PRK08175 180 CVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVGN------- 252 (395)
T ss_pred CCCHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCCcccCEEEEeeccccccCcchhheeeeCC-------
Confidence 999999999999999999999999999988886654444444432 346789999999999999999999985
Q ss_pred chhHHHHHHhhhhh-ccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecC
Q 014603 278 DSGIVDSIKSFLNI-SSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLN 356 (422)
Q Consensus 278 ~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~ 356 (422)
+++++++...... ..+++.+.|.++..++.. .+.++++.++.++++++.+.+.|+++ ++. +..|.+|+|+|++++
T Consensus 253 -~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~-~~~p~~g~~i~i~l~ 328 (395)
T PRK08175 253 -PELVSALARIKSYHDYGTFTPLQVAAIAALEG-DQQCVRDIAEQYKRRRDVLVKGLHEA-GWM-VEMPKASMYVWAKIP 328 (395)
T ss_pred -HHHHHHHHHHHhhcccCCCcHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHc-CCc-ccCCCEEEEEEEECC
Confidence 5788888776643 345667788888888864 35678888999999999999999998 676 447888999999997
Q ss_pred cccccCCCCHHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEeccChHHHHHHHHHHHHHHHHh
Q 014603 357 YSLLEGINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAVEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 357 ~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRis~~~~~~~l~~~~~~l~~~~~~~ 418 (422)
.... ..++.+++..+++++||.|.||..|+. ++++||+++.+++.+++++++|.+++++.
T Consensus 329 ~~~~--~~~~~~~~~~l~~~~gv~v~p~~~f~~~~~~~lRis~~~~~~~~~~al~~l~~~l~~~ 390 (395)
T PRK08175 329 EPYA--AMGSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFALIENRDRIRQAIRGIKAMFRAD 390 (395)
T ss_pred cccC--CCCHHHHHHHHHHhCCEEEeCchhhCcCCCCeEEEEeCCCHHHHHHHHHHHHHHHHhc
Confidence 5310 013567777777788999999988865 46999999988899999999999998753
No 56
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=100.00 E-value=2.9e-46 Score=357.68 Aligned_cols=354 Identities=24% Similarity=0.399 Sum_probs=301.7
Q ss_pred CCceeecCCCCCCCCCCCCcHHHHHHHHHHhhC--CC-CCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHH
Q 014603 45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRS--AR-FNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ 121 (422)
Q Consensus 45 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~--~~-~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 121 (422)
+..++|+.|.|.. .+.+...+.+++.+.... .. ...|.+..|.++||+.+++++....|+.+++++|++|+|+++
T Consensus 89 ~~~i~f~~g~p~~--~~fp~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q~ 166 (459)
T COG1167 89 PSVIDFAGGLPDP--SLFPLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGAQQ 166 (459)
T ss_pred CceecCCCCCCCc--ccCCHHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEEeCCHHH
Confidence 7889999998663 344556666666666543 22 468888899999999999999988899999999999999999
Q ss_pred HHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCC-ceEEEEeCC--CCCccc
Q 014603 122 AIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADEN-TVALVIINP--GNPCGN 198 (422)
Q Consensus 122 a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~-~~~i~i~~p--~nptG~ 198 (422)
|++++.+.+++|||+|++++|+|++....++..|.+++.+|++. .++|+|.|++.++.. ++++ ++.| +||||.
T Consensus 167 al~l~~~~l~~pGd~v~vE~PtY~~~~~~~~~~g~~~~~vp~d~---~G~~~e~le~~~~~~~~k~~-y~~P~~qNPtG~ 242 (459)
T COG1167 167 ALDLLLRLLLDPGDTVLVEDPTYPGALQALEALGARVIPVPVDE---DGIDPEALEEALAQWKPKAV-YVTPTFQNPTGV 242 (459)
T ss_pred HHHHHHHHhCCCCCEEEEcCCCcHHHHHHHHHcCCcEEecCCCC---CCCCHHHHHHHHhhcCCcEE-EECCCCCCCCCC
Confidence 99999999999999999999999999999999999999999863 358999999988764 5555 4445 899999
Q ss_pred ccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccc
Q 014603 199 VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQD 278 (422)
Q Consensus 199 ~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~ 278 (422)
+||.++.++|+++|++||++||+||.|+.+.+++.+..++..++..++|++++||||+ ..||+|+||++++
T Consensus 243 tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld~~~rViy~gSFSK~-l~PglRlG~vv~p-------- 313 (459)
T COG1167 243 TMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALDAPGRVIYLGSFSKT-LAPGLRLGYVVAP-------- 313 (459)
T ss_pred ccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChHhhCCCCCEEEEeeehhh-cccccceeeeeCC--------
Confidence 9999999999999999999999999999999998777778888888899999999999 6999999999997
Q ss_pred hhHHHHHHhhhh-hccCcchHHHHHHHHHHhhc-hHHHHHHHHHHHHHHHHHHHHHhhcC-CCCCCCCCCCCceEEEEec
Q 014603 279 SGIVDSIKSFLN-ISSDPATFIQGAVPQILEKT-EEEFFSKITDILRETADICCDRLKEI-PCITCPKKPEGSMFVMVKL 355 (422)
Q Consensus 279 ~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~g~~~~~~~ 355 (422)
+++++++..... .+..++.+.|.++...+... -+.++.+.+..++++++.+.+.|++. |+...+..|.+|+|+|+++
T Consensus 314 ~~~~~~~~~~k~~~~~~~s~~~Q~~la~~l~~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~~~~~~~~p~gG~flwl~l 393 (459)
T COG1167 314 PELIEKLLRLKQAADLGPSSLSQAALAAFLLSGHYDRHLRRLRREYARRRDALLEALAEYLPELATWTRPEGGLFLWLEL 393 (459)
T ss_pred HHHHHHHHHHHHHhcCCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeecCCceEEEEEEc
Confidence 578888887764 45688889999999999853 38899999999999999999999996 4333367899999999999
Q ss_pred CcccccCCCCHHHHHHHHHHhcCeEEec-CCCCCC----CCeEEEEec-cChHHHHHHHHHHHHHHHHhc
Q 014603 356 NYSLLEGINSDMEFALKLAKEESVIVLP-GITVGL----KDWLRITFA-VEPSALEDGLGRMKAFYDRHA 419 (422)
Q Consensus 356 ~~~~~~~~~~~~~~~~~l~~~~gi~v~~-g~~~~~----~~~iRis~~-~~~~~l~~~~~~l~~~~~~~~ 419 (422)
+.. .+..+++... .++|+.+.| |..|.. .+++|++++ .+++++++++++|.+++++..
T Consensus 394 ~~~-----~~~~~l~~~a-~~~gv~i~~~g~~f~~~~~~~~~~Rl~~s~~~~e~i~~gi~~l~~~~~~~~ 457 (459)
T COG1167 394 PEG-----IDARELLAAA-LEKGVVVTPLGSAFSADGDPRNGLRLSFSSPSEEEIEEGIKRLAALLREAA 457 (459)
T ss_pred CCC-----CCHHHHHHHH-HHCCCEEEcCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHHHHHHHHh
Confidence 875 2566666665 556999998 888865 358999999 678999999999999998754
No 57
>PRK06836 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.7e-45 Score=348.29 Aligned_cols=368 Identities=22% Similarity=0.357 Sum_probs=292.5
Q ss_pred HHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCC--CCCCCCCCCCCHHHHHHHHHHHhhcCC
Q 014603 28 VRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSA--RFNCYSSTVGILPARRAIADYLNRDLP 105 (422)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~lr~~ia~~l~~~~~ 105 (422)
++.+++.....-...+..++++|+.|.|+ +++++.+.+++.+..... ....|++..|.+++|+.+++++++.++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~l~~g~p~----~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~ 91 (394)
T PRK06836 16 IRKMFEEGARLKAEYGADNVFDFSLGNPS----VPPPAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRRFG 91 (394)
T ss_pred HHHHHHHHHHHHhhcCCCCeEEecCcCCC----CCCCHHHHHHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHHHhC
Confidence 55555443322122245678999999865 467789999998877542 246798889999999999999998888
Q ss_pred CCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCce
Q 014603 106 YKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTV 185 (422)
Q Consensus 106 ~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~ 185 (422)
.++++++|++|+|++++++.++++++++||.|++++|+|..+...++..|.+++.++.+++ ++++|++++++.++++++
T Consensus 92 ~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vli~~p~~~~~~~~~~~~g~~v~~v~~~~~-~~~~d~~~l~~~~~~~~~ 170 (394)
T PRK06836 92 TPLTADHIVMTCGAAGALNVALKAILNPGDEVIVFAPYFVEYRFYVDNHGGKLVVVPTDTD-TFQPDLDALEAAITPKTK 170 (394)
T ss_pred CCCCcCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEEecCCc-cCcCCHHHHHhhcCcCce
Confidence 7889999999999999999999999999999999999999999999999999999998643 467999999999988899
Q ss_pred EEEEeCCCCCcccccCHHHHHHHHHHHHH------cCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCC
Q 014603 186 ALVIINPGNPCGNVYTYQHLQKIAETAKK------LGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIV 259 (422)
Q Consensus 186 ~i~i~~p~nptG~~~~~~~l~~i~~~~~~------~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~ 259 (422)
++++++|+||||.++|.+++++|+++|++ ||++||+||+|..+.+++.....+.. ..+++++++|+||.|++
T Consensus 171 ~v~~~~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~--~~~~~i~~~S~SK~~~~ 248 (394)
T PRK06836 171 AVIINSPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIFK--YYDNSIVVYSFSKSLSL 248 (394)
T ss_pred EEEEeCCCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCCChHH--ccCcEEEEecchhhccC
Confidence 99999999999999999999999999999 89999999999998876543333222 23578999999999999
Q ss_pred CCceeEEEEeeCCCCcccchhHHHHHHhhhhh--ccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 014603 260 PGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI--SSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIP 337 (422)
Q Consensus 260 ~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 337 (422)
||+|+||+++++.. .....+...+...... ...++.+.|.++..++++. ..++.++++++.+.+.|+++
T Consensus 249 pGlRiG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~------~~~~~~~~~r~~l~~~L~~~- 319 (394)
T PRK06836 249 PGERIGYIAVNPEM--EDADDLVAALVFANRILGFVNAPALMQRVVAKCLDAT------VDVSIYKRNRDLLYDGLTEL- 319 (394)
T ss_pred cceeeEEEecCHHH--hhhHHHHHHHHHHhhccccccCCHHHHHHHHHHhCCh------HHHHHHHHHHHHHHHHHHhC-
Confidence 99999999986311 0000111222111111 1256678889988888752 12466788889999999988
Q ss_pred CCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEeccChHHHHHHHHHHHHHHHH
Q 014603 338 CITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALEDGLGRMKAFYDR 417 (422)
Q Consensus 338 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~l~~~~~~l~~~~~~ 417 (422)
++. +..|.+|+|+|++++.. +..+++.. +.++||.|.||..|+..+++||+++.+++++++++++|++++++
T Consensus 320 g~~-~~~~~gg~~~~~~~~~~------~~~~~~~~-l~~~gv~v~~g~~f~~~~~iRi~~~~~~~~~~~~i~~l~~~l~~ 391 (394)
T PRK06836 320 GFE-CVKPQGAFYLFPKSPEE------DDVAFCEK-AKKHNLLLVPGSGFGCPGYFRLSYCVDTETIERSLPAFEKLAKE 391 (394)
T ss_pred CCE-eecCCceEEEEEeCCCC------CHHHHHHH-HHhCCEEEECchhcCCCCeEEEEecCCHHHHHHHHHHHHHHHHH
Confidence 676 45788899999988642 46667654 56789999999998878999999998899999999999999988
Q ss_pred hc
Q 014603 418 HA 419 (422)
Q Consensus 418 ~~ 419 (422)
|.
T Consensus 392 ~~ 393 (394)
T PRK06836 392 YK 393 (394)
T ss_pred hc
Confidence 74
No 58
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=100.00 E-value=1.8e-45 Score=350.40 Aligned_cols=344 Identities=18% Similarity=0.234 Sum_probs=273.8
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCC----CCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecC
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSA----RFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLG 118 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~----~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g 118 (422)
.+.++++|+.|++. +++++.+.+++.+.+.+. ....|.+..|.+++|+++++++.+. .+++++|++|+|
T Consensus 31 ~~~~~i~l~~~~~~----~~~~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~aia~~~~~~---~~~~d~I~it~G 103 (402)
T TIGR03542 31 PSADIIRLGIGDTT----QPLPASVIEAFHNAVDELASEETFRGYGPEQGYPFLREAIAENDYRG---RIDPEEIFISDG 103 (402)
T ss_pred CCCCeEEcCCCCCC----CCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHhc---CCCHHHEEECCC
Confidence 46789999999865 577889999998877652 2356988899999999999986432 378899999999
Q ss_pred HHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCC-----------eEEEeeccCCCCcccCHHHHHHhhcCCceEE
Q 014603 119 CTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHL-----------EVRHFDLLPAKGWEVDLDAVEALADENTVAL 187 (422)
Q Consensus 119 ~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~-----------~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i 187 (422)
+++++..+. .++.+||+|++++|+|..+...++..|. +++.++.+.++++..|.+. .++++++
T Consensus 104 a~~al~~l~-~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-----~~~~~~i 177 (402)
T TIGR03542 104 AKCDVFRLQ-SLFGSDNTVAVQDPVYPAYVDSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPE-----EPKIDII 177 (402)
T ss_pred cHHHHHHHH-HhcCCCCEEEEeCCCCcchHHHHHHcCCccccccccccceEEEeecchhhCCCCCccc-----cCCceEE
Confidence 999999864 5568999999999999999999999999 8888887554455555321 1468999
Q ss_pred EEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCC-CCCeEEEecCccccCCCCceeEE
Q 014603 188 VIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IVPVLTLGSISKRWIVPGWRLGW 266 (422)
Q Consensus 188 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~-~~~~i~i~s~sK~~~~~G~r~G~ 266 (422)
++++||||||.+++.+++++|+++|+++|++||+||+|..+.+++..+.++..+.. .+++++++||||.|++||+|+||
T Consensus 178 ~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~pGlRiG~ 257 (402)
T TIGR03542 178 YLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPGAKECAIEFRSFSKTAGFTGVRLGW 257 (402)
T ss_pred EEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCcchhhCCCCcccEEEEecCccccCCCCcceEE
Confidence 99999999999999999999999999999999999999998776533334444433 35789999999999999999999
Q ss_pred EEeeCCCCcccchhHH--------HHHHhhh-hhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 014603 267 LVTSDPNGILQDSGIV--------DSIKSFL-NISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIP 337 (422)
Q Consensus 267 ~~~~~~~~~~~~~~~~--------~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 337 (422)
+++++ +++ ..+.... ....+++.+.|.++..++......+..+.++.++++++.+.+.|++.
T Consensus 258 ~i~~~--------~l~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~- 328 (402)
T TIGR03542 258 TVVPK--------ELTYADGHSVIQDWERRQCTKFNGASYPVQRAAEAAYAGEGLQPILEAISYYMENARILRKALEAA- 328 (402)
T ss_pred EEecH--------HHhhcchhhHHHHHHHHhhhcccCCCHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHhc-
Confidence 99963 343 2221111 22335778899988888875333456667788899999999999987
Q ss_pred CCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEeccChHHHHHHHHHHHHH
Q 014603 338 CITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAVEPSALEDGLGRMKAF 414 (422)
Q Consensus 338 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRis~~~~~~~l~~~~~~l~~~ 414 (422)
++. +..|.+|+|+|++++.. .++.+++..+++++||.+.||..|+. .+++||+++.+++++++++++|+++
T Consensus 329 ~~~-~~~~~~~~f~~v~l~~~-----~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~ 401 (402)
T TIGR03542 329 GFK-VYGGEHAPYLWVKTPEG-----ISSWDFFDFLLYQYHVVGTPGSGFGPSGEGFVRFSAFGKRENIVEACERIKEA 401 (402)
T ss_pred Cce-ecCCCceeEEEEECCCC-----CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHhh
Confidence 666 44667899999999742 24667888888788999999998865 5799999887889999999999875
No 59
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=100.00 E-value=4.1e-46 Score=354.45 Aligned_cols=371 Identities=21% Similarity=0.233 Sum_probs=284.7
Q ss_pred HHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCC-CCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHH
Q 014603 19 ELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSA-FPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIA 97 (422)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~-~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia 97 (422)
|+...+.+.++.+...+... ..+++|||+.|.|.. ...+|..+.+.+++.+.........|++..|.+++|++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~----~~~~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia 79 (396)
T PRK09257 4 HLEAAPADPILGLMEAFRAD----PRPDKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETETTKNYLPIEGLAAYRQAVQ 79 (396)
T ss_pred cCCCCCCChHHHHHHHHhhC----CCcCcEecceeeEECCCCCEeccHHHHHHHHHhcccccCCCcCCCCCCHHHHHHHH
Confidence 45667777787777655433 245789999997531 1112224788899888765544558999999999999999
Q ss_pred HHHhhcCCCCCCCCCE--EEecCHHHHHHHHHHHh--cCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCH
Q 014603 98 DYLNRDLPYKLSPDDV--YLTLGCTQAIEVILTVL--ARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDL 173 (422)
Q Consensus 98 ~~l~~~~~~~~~~~~i--~~~~g~~~a~~~~~~~l--~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~ 173 (422)
+++.+..+..+++++| ++|+|+++|+..+++++ +++||+|++++|+|+.+...++..|.+++.++....+++++|+
T Consensus 80 ~~~~~~~~~~~~~~~i~v~iT~Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~ 159 (396)
T PRK09257 80 ELLFGADSPALAAGRVATVQTPGGTGALRVGADFLKRAFPDAKVWVSDPTWPNHRAIFEAAGLEVKTYPYYDAATKGLDF 159 (396)
T ss_pred HHhcCCCCcccccCeEEEEecCCccHHHHHHHHHHHHhCCCCeEEECCCCcccHHHHHHHcCCcEEEEeccccccCccCH
Confidence 9997765544678887 99999999999998766 5899999999999999999999999999999874344578999
Q ss_pred HHHHHhhc---CCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCC-CCCCCccccC-CCCCeE
Q 014603 174 DAVEALAD---ENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGN-TPFVPMGVFG-SIVPVL 248 (422)
Q Consensus 174 ~~l~~~~~---~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~-~~~~~~~~~~-~~~~~i 248 (422)
+.+++.+. +++.++++++||||||.+++.+++++|+++|++||++||+||+|..+.++. ....++..+. ..++++
T Consensus 160 ~~l~~~~~~~~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi 239 (396)
T PRK09257 160 DAMLADLSQAPAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLELL 239 (396)
T ss_pred HHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhcCCcEE
Confidence 99998765 235566678999999999999999999999999999999999999887642 1122333332 235799
Q ss_pred EEecCccccCCCCceeEEEEe--eCCCCcccchhHHHHHHhhh-hhccCcchHHHHHHHHHHhhch-----HHHHHHHHH
Q 014603 249 TLGSISKRWIVPGWRLGWLVT--SDPNGILQDSGIVDSIKSFL-NISSDPATFIQGAVPQILEKTE-----EEFFSKITD 320 (422)
Q Consensus 249 ~i~s~sK~~~~~G~r~G~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~~ 320 (422)
+++||||.|+++|+|+||+++ +++. .. .++..++.... ....+++.+.|.++..+|.... +.++++.++
T Consensus 240 ~i~SfSK~~~~~GlRiG~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~ 316 (396)
T PRK09257 240 VASSFSKNFGLYGERVGALSVVAEDAE-EA--DRVLSQLKATIRTNYSNPPAHGAAIVATILNDPELRAEWEAELEEMRE 316 (396)
T ss_pred EEEEcCCcCccccccceeEEEEeCCHH-HH--HHHHHHHHHHhhhhcCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 999999999989999999984 2210 00 12334443333 2334567888999999987632 456777889
Q ss_pred HHHHHHHHHHHHhhcCC---CCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEe
Q 014603 321 ILRETADICCDRLKEIP---CITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITF 397 (422)
Q Consensus 321 ~~~~~~~~l~~~L~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~ 397 (422)
.++++++.+.+.|+++. ++. +..|.+|+|+|++++ .+++.++++++||.+.|. + ||++
T Consensus 317 ~~~~rr~~l~~~L~~~~~~~~~~-~~~p~gg~~~w~~l~----------~~~~~~l~~~~~V~~~p~------~--ri~~ 377 (396)
T PRK09257 317 RIKAMRQLLVEALKAKGPSRDFD-FIARQRGMFSYSGLT----------PEQVDRLREEFGVYAVGS------G--RINV 377 (396)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcc-cccccceEEEecCCC----------HHHHHHHHHcCCEEEcCC------C--eEEE
Confidence 99999999999999872 355 447899999999874 245677888899999873 2 9999
Q ss_pred c-cChHHHHHHHHHHHHHH
Q 014603 398 A-VEPSALEDGLGRMKAFY 415 (422)
Q Consensus 398 ~-~~~~~l~~~~~~l~~~~ 415 (422)
+ .+++++++++++|++++
T Consensus 378 ~~~~~~~i~~~~~~i~~~~ 396 (396)
T PRK09257 378 AGLNESNIDYVAEAIAAVL 396 (396)
T ss_pred eeCCHHHHHHHHHHHHhhC
Confidence 8 79999999999998753
No 60
>PRK09275 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.6e-45 Score=352.00 Aligned_cols=375 Identities=19% Similarity=0.299 Sum_probs=284.7
Q ss_pred cHHHHHHHHHhhhhccCCCC-------ceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHH
Q 014603 27 TVRGVLNSLLENLNKNDTRP-------LIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADY 99 (422)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~-------~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~ 99 (422)
...++.+++..++..+.+.+ +|+|+.|.|+ +++++.+.+++ +.+.. ..|+++.|++++|++|+++
T Consensus 75 ~~~g~~~r~~~~~~~~~~~~g~~~l~~~i~l~~g~p~----~~~~~~v~e~~-~~~~~---~~Y~~~~g~~~lreaia~~ 146 (527)
T PRK09275 75 QKEGIEERFEAFLEEHKDVPGIDFLRDAVSYVRDQLG----FDADEFVYELV-DGIIG---DNYPVPDRMLKHTEKIVKD 146 (527)
T ss_pred ccccHHHHHHHHHHhCCCCchHHHHHHHHhhcCCCCC----CCCCHHHHHHH-HHHhc---CCCCCCCCCHHHHHHHHHH
Confidence 34556777777776655433 6999999966 68888888844 44433 2599999999999999985
Q ss_pred Hhh-cCCCCC-C--CCCEEEecCHHHHHHHHHHH-----hcCCCCEEEecCCCccchHHHHhhCCCeE--EEeeccCCCC
Q 014603 100 LNR-DLPYKL-S--PDDVYLTLGCTQAIEVILTV-----LARPGANILLPRPGFPYYEARATHSHLEV--RHFDLLPAKG 168 (422)
Q Consensus 100 l~~-~~~~~~-~--~~~i~~~~g~~~a~~~~~~~-----l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~ 168 (422)
+.+ ..+... . .++|++|+|+++++..++.+ +++|||+|++++|+|+.|...++..|.++ +.++.+++++
T Consensus 147 ~~~~~~~~~~~~~~~~~I~vT~Ga~~al~~~~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~~~~l~g~~~~~v~v~~~~~~~ 226 (527)
T PRK09275 147 YLRQEMCGGRPPKGEFDLFAVEGGTAAMCYIFDSLKENGLLKAGDKIALMTPIFTPYLEIPELPRYDLEVVHINADEENE 226 (527)
T ss_pred HHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHHhhhhcCCCCCEEEEeCCChHHHHHHHHHcCCCeEEEEeecCcccC
Confidence 543 332222 2 34899999999999999886 68999999999999999999888776555 4444445567
Q ss_pred cccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHH--cCcEEEEcccccccccCCCCCCCccccCCCCC
Q 014603 169 WEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKK--LGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP 246 (422)
Q Consensus 169 ~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~--~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~ 246 (422)
|.+|++.++++++++++++++++|+||||.+++.+++++|+++|++ +|++||+||+|..+.+. +.++... ..++
T Consensus 227 f~~d~~~l~~~~~~~tkai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~---~~s~~~~-~~~~ 302 (527)
T PRK09275 227 WQYPDSELEKLRDPSIKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVDD---FRSLFAV-LPYN 302 (527)
T ss_pred CCCCHHHHHhhcCCCCCEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhccc---ccCHHHh-CCCC
Confidence 8999999999888899999999999999999999999999999965 49999999999987642 2232222 2257
Q ss_pred eEEEecCccccCCCCceeEEEEeeCCCCcccchhHH----------------------------HHH----Hhhh-hhcc
Q 014603 247 VLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIV----------------------------DSI----KSFL-NISS 293 (422)
Q Consensus 247 ~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~----------------------------~~~----~~~~-~~~~ 293 (422)
++++.||||.|+++|+|+||+++++.+ ++ .+++ +++ .... +.+.
T Consensus 303 ~I~v~SfSK~f~mtG~RlG~i~~~~~~-v~--~~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~~t~ 379 (527)
T PRK09275 303 TILVYSFSKYFGATGWRLGVIALHEDN-VF--DKLIAKLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALNHTA 379 (527)
T ss_pred EEEEeehhhhccCcHhHHhhhhcCchh-HH--HHHHHhccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHhhcc
Confidence 999999999999999999999987421 11 1122 222 2222 3345
Q ss_pred CcchHHHHHH-----HHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccc--------
Q 014603 294 DPATFIQGAV-----PQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLL-------- 360 (422)
Q Consensus 294 ~~~~~~~~a~-----~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~-------- 360 (422)
+.+.+.|.++ .++++. .+.+.++.++.++++++.+.+.|. . .+. ...|.+++|+|+.++....
T Consensus 380 ~~s~p~Q~a~al~~~~all~~-~~~~~~~~~~~~~~Rr~~l~~~Lg-~-~~~-~~~p~g~fY~~~di~~~~~~~~g~~f~ 455 (527)
T PRK09275 380 GLSTPQQVQMALFSLFALLDE-EDAYKKAMKDIIRRRYKALYEGLG-L-PEP-EDPNNAAYYTLIDLEEWAEKNYGKEFA 455 (527)
T ss_pred CCCCHHHHHHHHHHHHHHHhC-chHHHHHHHHHHHHHHHHHHHHcC-C-CCc-CCCCCeeEEEEEEhHHhhhhccCchhh
Confidence 7777788763 234543 357888899999999999988882 2 222 2368899999998864210
Q ss_pred ---cCCCCHHHHHHHHHHhcCeEEecCCCCCC-CCeEEEEec-cChHHHHHHHHHHHHHHHHhcc
Q 014603 361 ---EGINSDMEFALKLAKEESVIVLPGITVGL-KDWLRITFA-VEPSALEDGLGRMKAFYDRHAK 420 (422)
Q Consensus 361 ---~~~~~~~~~~~~l~~~~gi~v~~g~~~~~-~~~iRis~~-~~~~~l~~~~~~l~~~~~~~~~ 420 (422)
....++.+++.+|+++.||.+.||..|+. ++++|||++ .+++++.+++++|+++++++.+
T Consensus 456 ~~l~~~~~~~~f~~~Ll~e~gV~v~PG~~Fg~~~~~vRis~a~~~~~~~~~~~~rl~~~l~~y~~ 520 (527)
T PRK09275 456 DYLKKNYSPVDLLFRLAEETGVVLLPGGGFGGPEWSVRVSLANLNEEDYAKIGKAIRKLLDEYYE 520 (527)
T ss_pred hhhhccCCHHHHHHHHHhcCCEEEeCchhhCCCCCeEEEEEecCCHHHHHHHHHHHHHHHHHHHH
Confidence 01125788899999999999999999985 578999999 6889999999999999988754
No 61
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=100.00 E-value=1.5e-45 Score=354.28 Aligned_cols=338 Identities=17% Similarity=0.210 Sum_probs=278.6
Q ss_pred CCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHH
Q 014603 45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIE 124 (422)
Q Consensus 45 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~ 124 (422)
..+++|+.|.|. .+++|.+.+++.+.... ...|++..|.+++|+++++++++..+ .+++|++|+|+++++.
T Consensus 85 ~~~i~L~~g~p~----~~~~p~~~~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~~~~~~~---~~~~Iiit~G~~~al~ 155 (431)
T PRK15481 85 TPLHDLAGGNPD----PQRLPDLSRYFARLSRT--PRLYGDAPVSPELHAWAARWLRDDCP---VAFEIDLTSGAIDAIE 155 (431)
T ss_pred chhhhhhcCCCC----hhHhHHHHHHHHHhhhh--hhhcCCcCCCHHHHHHHHHHHhhccC---CcCeEEEecCcHHHHH
Confidence 356888888755 34556677777775433 35799989999999999999975322 3569999999999999
Q ss_pred HHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEe-CCCCCcccccCHH
Q 014603 125 VILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVII-NPGNPCGNVYTYQ 203 (422)
Q Consensus 125 ~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~-~p~nptG~~~~~~ 203 (422)
.++++++++||.|++++|+|..+...++..|++++.++++. + ++|++.+++.+++++++++++ +||||||.+++.+
T Consensus 156 ~~~~~l~~pgd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~-~--g~~~~~l~~~~~~~~k~i~~~p~p~NPTG~~~s~~ 232 (431)
T PRK15481 156 RLLCAHLLPGDSVAVEDPCFLSSINMLRYAGFSASPVSVDA-E--GMQPEKLERALAQGARAVILTPRAHNPTGCSLSAR 232 (431)
T ss_pred HHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCeEEeeccCC-C--CCCHHHHHHHHhcCCCEEEECCCCCCCCCccCCHH
Confidence 99999999999999999999999999999999999998853 2 489999999887788888887 9999999999999
Q ss_pred HHHHHHHHHHHc-CcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHH
Q 014603 204 HLQKIAETAKKL-GIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIV 282 (422)
Q Consensus 204 ~l~~i~~~~~~~-~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 282 (422)
++++|+++|+++ +++||+||+|..+.+.+. ...+. . ..+++++++||||.|+ ||+|+||++++ ++++
T Consensus 233 ~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~-~~~~~-~-~~~~vi~~~SfSK~~~-~GlRiG~~i~~--------~~~~ 300 (431)
T PRK15481 233 RAAALRNLLARYPQVLVIIDDHFALLSSSPY-HSVIP-Q-TTQRWALIRSVSKALG-PDLRLAFVASD--------SATS 300 (431)
T ss_pred HHHHHHHHHHhcCCceEEecCchhhhccCCC-CCCCc-C-CCCCEEEEeeeccccC-CCceeEEEeCC--------HHHH
Confidence 999999999999 999999999998876432 11221 1 2357999999999998 99999999986 4677
Q ss_pred HHHHhhhhh-ccCcchHHHHHHHHHHhhch-HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccc
Q 014603 283 DSIKSFLNI-SSDPATFIQGAVPQILEKTE-EEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLL 360 (422)
Q Consensus 283 ~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~ 360 (422)
+++...... ..+.+.+.|.++..+|++.. +.++++.++.++++++.+.+.|++. ++. +..|.+|+|+|++++.
T Consensus 301 ~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~~-~~~-~~~p~gg~f~~~~l~~--- 375 (431)
T PRK15481 301 ARLRLRLNSGTQWVSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQY-GIA-IPSPGDGLNLWLPLDT--- 375 (431)
T ss_pred HHHHHHHhccccCCCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHc-CCc-cccCCCeEEEEEECCC---
Confidence 777655432 24578899999999998743 5678889999999999999999987 666 4478999999999974
Q ss_pred cCCCCHHHHHHHHHHhcCeEEecCCCCCC---CCeEEEEec-cChHHHHHHHHHHHHHHH
Q 014603 361 EGINSDMEFALKLAKEESVIVLPGITVGL---KDWLRITFA-VEPSALEDGLGRMKAFYD 416 (422)
Q Consensus 361 ~~~~~~~~~~~~l~~~~gi~v~~g~~~~~---~~~iRis~~-~~~~~l~~~~~~l~~~~~ 416 (422)
++.++...+ .++||.+.||..|+. .+++|||++ .+++++++++++|++++.
T Consensus 376 ----~~~~~~~~l-~~~gV~v~pg~~f~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~~~ 430 (431)
T PRK15481 376 ----DSQATALTL-AKSGWLVREGEAFGVSAPSHGLRITLSTLNDAEINRLAADLHQALN 430 (431)
T ss_pred ----CHHHHHHHH-HHCCcEEecCCccccCCCCCeEEEEcCCCChHHHHHHHHHHHHHhc
Confidence 355666665 467999999998864 368999999 578999999999998874
No 62
>PTZ00376 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.5e-45 Score=351.04 Aligned_cols=369 Identities=17% Similarity=0.189 Sum_probs=280.7
Q ss_pred HHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCC-CCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHH
Q 014603 19 ELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSA-FPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIA 97 (422)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~-~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia 97 (422)
|+...+.+.++++.+.+++. .++++|||+.|.|.+ .+...+.+.+.+++.+........+|++..|.+++|++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~----~~~~~i~l~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia 82 (404)
T PTZ00376 7 QVPLGPPDPILGLAAAFKAD----PSPSKVNLGIGAYRDENGKPYVLESVRKAEKIIAEKNLDKEYLPIEGLQSFIEAAQ 82 (404)
T ss_pred cCCcCCCChHHHHHHHHhhc----CCcccEecccceeECCCCCEehhhHHHHHHHHhccccCCCCCCCCCCCHHHHHHHH
Confidence 55566777788877766432 356889999998531 1111223345555444333334468999999999999999
Q ss_pred HHHhhcCCCCCCCCCEE--EecCHHHHHHHHHH---HhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccC
Q 014603 98 DYLNRDLPYKLSPDDVY--LTLGCTQAIEVILT---VLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVD 172 (422)
Q Consensus 98 ~~l~~~~~~~~~~~~i~--~~~g~~~a~~~~~~---~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d 172 (422)
+++.+..+..+++++|+ .|.|+++++..++. +++++||+|++++|+|+.+...++..|.+++.+++.+++++++|
T Consensus 83 ~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~l~~~~~~~~d 162 (404)
T PTZ00376 83 KLLFGEASYALAEKRIATVQALSGTGALRLGFEFLKRFLPAGTTVYVSNPTWPNHVNIFKSAGLNVKEYRYYDPKTKGLD 162 (404)
T ss_pred HHhcCCCccccccCeEEEeeccCcchHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCceeeccccCcccCCcC
Confidence 99976555557888998 48999999988865 66899999999999999999999999999999998555568899
Q ss_pred HHHHHHhhc---CCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCC--CCCCccccC-CCCC
Q 014603 173 LDAVEALAD---ENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNT--PFVPMGVFG-SIVP 246 (422)
Q Consensus 173 ~~~l~~~~~---~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~--~~~~~~~~~-~~~~ 246 (422)
++.+++.+. ++++++++++||||||.+++.+++++|+++|++||++||+||+|..+.+++. ...++..+. ..++
T Consensus 163 ~~~l~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~ 242 (404)
T PTZ00376 163 FDGMLEDLRTAPNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAERGVE 242 (404)
T ss_pred HHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhcCCc
Confidence 999998874 3456777899999999999999999999999999999999999999887541 111222222 2247
Q ss_pred eEEEecCccccCCCCceeEEEEe--eCCCCcccchhHHH----HHHhhh-hhccCcchHHHHHHHHHHhhch--HH---H
Q 014603 247 VLTLGSISKRWIVPGWRLGWLVT--SDPNGILQDSGIVD----SIKSFL-NISSDPATFIQGAVPQILEKTE--EE---F 314 (422)
Q Consensus 247 ~i~i~s~sK~~~~~G~r~G~~~~--~~~~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~~a~~~~l~~~~--~~---~ 314 (422)
+++++||||.|+++|+|+||+++ .+ +++.+ .+.... ....+++.+.|.++..+|++.. +. .
T Consensus 243 vi~i~SfSK~~~~~GlRvG~~~~~~~~-------~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~ 315 (404)
T PTZ00376 243 FLVAQSFSKNMGLYGERIGALHIVCAN-------KEEAANVLSQLKLIIRPMYSSPPIHGARIADRILSDPELRAEWLSE 315 (404)
T ss_pred EEEEEeCCCcccccccccceEEEEeCC-------HHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHhCCHHHHHHHHHH
Confidence 99999999999999999999842 21 34433 333322 2233557789999999997632 22 3
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCC---CCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCC
Q 014603 315 FSKITDILRETADICCDRLKEIP---CITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKD 391 (422)
Q Consensus 315 ~~~~~~~~~~~~~~l~~~L~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~ 391 (422)
+++.+++++++++.+.+.|+++. ++. ...|.+|+|+|++++ .+++.+|++++||.+.||.
T Consensus 316 ~~~~~~~~~~~r~~l~~~L~~~~~~~~~~-~~~p~gg~f~~~~~~----------~~~~~~L~~~~~v~v~p~~------ 378 (404)
T PTZ00376 316 LKEMSGRIQNMRQLLYDELKALGSPGDWE-HIINQIGMFSFTGLT----------KEQVERLIEKYHIYLLDNG------ 378 (404)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCccc-ccccCceEEEecCCC----------HHHHHHHHHhCCEeecCCC------
Confidence 55667789999999999999872 234 336889999998773 3677888888899999972
Q ss_pred eEEEEec-cChHHHHHHHHHHHHHHHH
Q 014603 392 WLRITFA-VEPSALEDGLGRMKAFYDR 417 (422)
Q Consensus 392 ~iRis~~-~~~~~l~~~~~~l~~~~~~ 417 (422)
||+++ .+.+++++++++|++++..
T Consensus 379 --Ris~~~~~~~~~~~~~~~l~~~~~~ 403 (404)
T PTZ00376 379 --RISVAGLTSKNVDYVAEAIHDVVRN 403 (404)
T ss_pred --eEEEeccCHHhHHHHHHHHHHHHhc
Confidence 99998 8999999999999998753
No 63
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=100.00 E-value=7.8e-45 Score=342.14 Aligned_cols=354 Identities=19% Similarity=0.299 Sum_probs=280.2
Q ss_pred cccHHHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHH
Q 014603 15 KANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARR 94 (422)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~ 94 (422)
++++|+.+.+...+....... ...+.++++|+.|.|. .+.++.+++++.+.... ..|++..|.+++|+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~i~l~~~~p~----~~~~~~~~~~~~~~~~~---~~Y~~~~G~~~lr~ 69 (364)
T PRK07865 2 PVSARLPDFPWDTLAPAKATA-----AAHPDGIVDLSVGTPV----DPVPPVIQEALAAAADA---PGYPTTAGTPELRE 69 (364)
T ss_pred CccccCCCccHHHHHHHHHHH-----HhcCCCEEEcCCCCCC----CCCCHHHHHHHHHHHhh---CCCCCccCCHHHHH
Confidence 456677776644444432211 1145678999999865 45578888888765432 47998889999999
Q ss_pred HHHHHHhhcCCCC-CCCCCEEEecCHHHHHHHHHHHh-cCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccC
Q 014603 95 AIADYLNRDLPYK-LSPDDVYLTLGCTQAIEVILTVL-ARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVD 172 (422)
Q Consensus 95 ~ia~~l~~~~~~~-~~~~~i~~~~g~~~a~~~~~~~l-~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d 172 (422)
++++++.+.+|+. +++++|++|+|+++++..++..+ +++||.|++++|+|+.+...++..|.+++.++ +
T Consensus 70 ~ia~~l~~~~~~~~~~~~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~---------~ 140 (364)
T PRK07865 70 AIVGWLARRRGVTGLDPAAVLPVIGSKELVAWLPTLLGLGPGDVVVIPELAYPTYEVGARLAGATVVRAD---------S 140 (364)
T ss_pred HHHHHHHHHcCCCCCCcccEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcccHHHHHHhcCCEEEecC---------C
Confidence 9999999888876 89999999999999999988888 79999999999999999999999998887663 1
Q ss_pred HHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCcccc---CCCCCeEE
Q 014603 173 LDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF---GSIVPVLT 249 (422)
Q Consensus 173 ~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~---~~~~~~i~ 249 (422)
++.++ .++++++++++|+||||.+++.+++++|+++|+++|++||+||+|..+.+++.....+... ...+++++
T Consensus 141 ~~~l~---~~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~ 217 (364)
T PRK07865 141 LTELG---PQRPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTGLLA 217 (364)
T ss_pred hhhCC---cccceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCccceEEE
Confidence 22322 2567899999999999999999999999999999999999999999887765322211110 12357999
Q ss_pred EecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhh-hccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHH
Q 014603 250 LGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADI 328 (422)
Q Consensus 250 i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~ 328 (422)
++||||.|+++|+|+||++++ +++++++..... ...+++.+.|.++..+|+. ..++++.++.++++++.
T Consensus 218 ~~S~SK~~~~~GlRiG~i~~~--------~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~ 287 (364)
T PRK07865 218 VHSLSKQSNLAGYRAGFVAGD--------PALVAELLEVRKHAGMMVPAPVQAAMVAALGD--DAHVREQRERYARRRAV 287 (364)
T ss_pred EeechhccCCCceeeEEEecC--------HHHHHHHHHHHHhcCCCcCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHH
Confidence 999999999999999999985 567787776553 3346678899999888875 56778888899999999
Q ss_pred HHHHhhcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEeccChHHHHH
Q 014603 329 CCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAVEPSALED 406 (422)
Q Consensus 329 l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRis~~~~~~~l~~ 406 (422)
+.+.|++. ++. +..|.+|+|+|+.++. +..++... ++++||.+.||..|+. .+++||+++.+++++++
T Consensus 288 l~~~L~~~-g~~-~~~~~~~~~~~~~~~~-------~~~~~~~~-l~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~~~~ 357 (364)
T PRK07865 288 LRPALEAA-GFR-VDHSEAGLYLWATRGE-------DCWDTVAW-LAERGILVAPGDFYGPAGAQHVRVALTATDERIAA 357 (364)
T ss_pred HHHHHHHc-CCc-ccCCCccEEEEEeCCC-------CHHHHHHH-HHHCCEEEeCccccCcCCCCEEEEEecCCHHHHHH
Confidence 99999987 666 4468889999998742 34555554 4677999999988763 57999999878899999
Q ss_pred HHHHHH
Q 014603 407 GLGRMK 412 (422)
Q Consensus 407 ~~~~l~ 412 (422)
++++|+
T Consensus 358 ~~~~l~ 363 (364)
T PRK07865 358 AVERLA 363 (364)
T ss_pred HHHHhh
Confidence 999885
No 64
>PRK06225 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.9e-44 Score=340.23 Aligned_cols=350 Identities=19% Similarity=0.305 Sum_probs=287.1
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 122 (422)
++.++|+|+.+.+. +++++.+.+++.+.+.......|++..|.+++|+++++++ ++++++|++|+|++++
T Consensus 26 ~~~~~i~l~~~~~~----~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l------~~~~~~v~~~~g~t~a 95 (380)
T PRK06225 26 KDKEMIWMGQNTNH----LGPHEEVREAMIRCIEEGEYCKYPPPEGFPELRELILKDL------GLDDDEALITAGATES 95 (380)
T ss_pred hcCCeEEccCCCCC----CCCCHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHhc------CCCCCcEEEeCCHHHH
Confidence 35679999998855 6788999999999987655668988889999999999998 5678899999999999
Q ss_pred HHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccC-CCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccC
Q 014603 123 IEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLP-AKGWEVDLDAVEALADENTVALVIINPGNPCGNVYT 201 (422)
Q Consensus 123 ~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~ 201 (422)
+..++++++.+||+|++++|+|..+...++..|.+++.++++. .+++.+|++.+++.++++++++++++|+||||.+++
T Consensus 96 l~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~~ 175 (380)
T PRK06225 96 LYLVMRAFLSPGDNAVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKLTPELVKENMDENTRLIYLIDPLNPLGSSYT 175 (380)
T ss_pred HHHHHHHhcCCCCEEEEcCCCCcchHHHHHHhCceEEeeccccccCCccCCHHHHHhhcCCCceEEEEeCCCCCCCcCCC
Confidence 9999999999999999999999988888889999999888743 345789999999998888999999999999999999
Q ss_pred HHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhH
Q 014603 202 YQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGI 281 (422)
Q Consensus 202 ~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~ 281 (422)
.+++++|+++|+++|+++|+||+|..+..+ .. ....+. .++++++.||||.|+++|+|+||++++ +++
T Consensus 176 ~~~~~~i~~~a~~~~~~ii~De~y~~~~~~-~~--~~~~~~-~~~~i~~~s~SK~~g~~G~RiG~i~~~--------~~l 243 (380)
T PRK06225 176 EEEIKEFAEIARDNDAFLLHDCTYRDFARE-HT--LAAEYA-PEHTVTSYSFSKIFGMAGLRIGAVVAT--------PDL 243 (380)
T ss_pred HHHHHHHHHHHHHCCcEEEEehhHHHHhcc-CC--chhhcC-CCCEEEEeechhhcCCccceeEEEecC--------HHH
Confidence 999999999999999999999999875432 11 112222 256899999999998899999999986 467
Q ss_pred HHHHHhhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCccccc
Q 014603 282 VDSIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLE 361 (422)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 361 (422)
++.+........+.+.+.|.++..++.. ...++++.++.++++++.+.+.|++++++.+...|.+|.|+|+.++...
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~a~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~-- 320 (380)
T PRK06225 244 IEVVKSIVINDLGTNVIAQEAAIAGLKV-KDEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYPSHGNMMVIDISEAG-- 320 (380)
T ss_pred HHHHHHHHhcccCCCHHHHHHHHHHHhc-chHHHHHHHHHHHHHHHHHHHHHHhCcCCccccCCCCCeEEEEEccccc--
Confidence 7777665433446677888888888864 2466777777788888889999998767543335677889999886421
Q ss_pred CCCCHHHHHHHHHHhcCeEEecCCCCCC---CCeEEEEeccChHHHHHHHHHHHHHHHHhcc
Q 014603 362 GINSDMEFALKLAKEESVIVLPGITVGL---KDWLRITFAVEPSALEDGLGRMKAFYDRHAK 420 (422)
Q Consensus 362 ~~~~~~~~~~~l~~~~gi~v~~g~~~~~---~~~iRis~~~~~~~l~~~~~~l~~~~~~~~~ 420 (422)
.+..++...+. ++||.+.||..|+. .+++|++++.+++++++++++|++++.+++.
T Consensus 321 --~~~~~l~~~l~-~~gi~v~~g~~~~~~~~~~~iR~s~~~~~e~l~~~~~~l~~~~~~~~~ 379 (380)
T PRK06225 321 --IDPEDLVEYLL-ERKIFVRQGTYTSKRFGDRYIRVSFSIPREQVEVFCEEFPDVVETLRT 379 (380)
T ss_pred --CCHHHHHHHHH-HCCEEEcCCcccCcCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHhhc
Confidence 14667777765 67999999976643 4689999998899999999999999988764
No 65
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=100.00 E-value=4.9e-46 Score=351.22 Aligned_cols=349 Identities=30% Similarity=0.537 Sum_probs=293.2
Q ss_pred CceeecCCCCCCCCCCCCcHHHHHHHHH-HhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCC-CEEEecCHHHHH
Q 014603 46 PLIPLGHGDPSAFPSFRTASVAVDAIVH-SVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPD-DVYLTLGCTQAI 123 (422)
Q Consensus 46 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~-~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~i~~~~g~~~a~ 123 (422)
++|||+.|++......++++++.+++.+ .........|++..|.+++|+++++++++..+..++++ +|++++|+++++
T Consensus 2 ~~I~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~~~ 81 (363)
T PF00155_consen 2 DVINLGSNAPLLLSQNPPPPAAIKAAIRGAATSSSFLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILVTSGAQAAL 81 (363)
T ss_dssp TEEESSSSSTSSTTSSHHHHHHHHHHHHHHHHHTGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHHHHH
T ss_pred CEEEEECCCCCCcccccchHHHHHHHHHHhhcccccccCCCchhhHHHHHHHHHHhhhccCcccccceEEEEecccccch
Confidence 5799999997742222355666666655 33334567999999999999999999997677778888 999999999999
Q ss_pred HHHHHHh-cCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC------CceEEEEeCCCCCc
Q 014603 124 EVILTVL-ARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE------NTVALVIINPGNPC 196 (422)
Q Consensus 124 ~~~~~~l-~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~i~i~~p~npt 196 (422)
..++..+ .++||+|+++.|+|+.+...++..|.+++.+++..++++.+|++.|++.+++ +++++++++|+|||
T Consensus 82 ~~~~~~~~~~~~~~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPt 161 (363)
T PF00155_consen 82 FLLLRLLKINPGDTVLVPDPCYPSYIEAARLLGAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPT 161 (363)
T ss_dssp HHHHHHHHSSTTSEEEEEESSSTHHHHHHHHTTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTT
T ss_pred hhhhhcccccccccceecCCccccccccccccCceeeeccccccccccccccccccccccccccccccceeeeccccccc
Confidence 9999999 7899999999999999999999999999999987778889999999998876 57899999999999
Q ss_pred ccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCC-ccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCc
Q 014603 197 GNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVP-MGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGI 275 (422)
Q Consensus 197 G~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~-~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~ 275 (422)
|.+++.+++++|+++|+++|++||+||+|..+.++.....+ ...+....+++++.|+||.|+++|+|+||++++
T Consensus 162 G~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRvG~i~~~----- 236 (363)
T PF00155_consen 162 GSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDPDFGPIRSLLDEDDNVIVVGSLSKSFGLPGLRVGYIVAP----- 236 (363)
T ss_dssp TBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHHHGHHTTTSTEEEEEESTTTTTSGGGTEEEEEEE-----
T ss_pred ccccccccccchhhhhcccccceeeeeceeccccCCCccCcccccccccccceeeeeccccccccccccccccch-----
Confidence 99999999999999999999999999999998886543322 344455556899999999999999999999996
Q ss_pred ccchhHHHHHHhhhhhccCcchHHHHHHHHHHhhch--HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEE
Q 014603 276 LQDSGIVDSIKSFLNISSDPATFIQGAVPQILEKTE--EEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMV 353 (422)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~ 353 (422)
+++++.+......... +.+.+.++..++.+.. ..++++.+++++++++.+.+.|++. ++. +..+.+|+|+|+
T Consensus 237 ---~~~~~~l~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-~~~-~~~~~~~~~~~~ 310 (363)
T PF00155_consen 237 ---PELIERLRRFQRSGLS-SSPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEI-GIT-VLPPEAGFFLWV 310 (363)
T ss_dssp ---HHHHHHHHHHHHHTTS-SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TSE-EEHHSBSSEEEE
T ss_pred ---hhhhhhhhhccccccc-cchhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHh-hhh-eeeccCccEEEE
Confidence 5788888877755434 7788888888887644 2388999999999999999999988 777 446678999999
Q ss_pred ecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEe-ccChHHHHHHHHHH
Q 014603 354 KLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITF-AVEPSALEDGLGRM 411 (422)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~-~~~~~~l~~~~~~l 411 (422)
.++.. ++.++..+|+++.||.+.||..|+.++++|+++ ..+++++++++++|
T Consensus 311 ~~~~~------~~~~l~~~L~~~~gi~v~pg~~~~~~~~iRi~~a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 311 RLDPN------DAEELAQELLEEYGILVRPGSYFGVPGYIRISLASHSEEDLEEALERL 363 (363)
T ss_dssp EESHH------HHHHHHHHHHHHHTEEEEEGGGGTSTTEEEEEGGCSCHHHHHHHHHHH
T ss_pred Ecccc------hHHHHHHHHHHhCCEEEEecCCCCCCCEEEEEeccCCHHHHHHHHhhC
Confidence 88753 357888888877799999999999999999999 58999999999986
No 66
>PLN02672 methionine S-methyltransferase
Probab=100.00 E-value=1.7e-44 Score=364.45 Aligned_cols=379 Identities=16% Similarity=0.256 Sum_probs=300.2
Q ss_pred HHHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHH
Q 014603 18 EELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIA 97 (422)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia 97 (422)
.++.+++.+.+..+.+ ..-.....++.++|+|+.|++. +++|+.+++++.+.+... .+ ..+.++++++++
T Consensus 671 ~~~~~~~~~~~~~l~~-~~~~~~~~~g~~vI~LsinE~d----~ppPp~V~eAi~eal~~~---~~--s~g~pdlr~aLa 740 (1082)
T PLN02672 671 SKFIGFSSSARSALKE-AELSVSGSQESSLIHMDVDESF----LPVPSAVKASIFESFVRQ---NI--SESETDPRPSIL 740 (1082)
T ss_pred HhhhCCCchhHHHHHh-cccCCcccCCCCEEEEeCCCCC----CCCCHHHHHHHHHHHhhc---CC--CCCChHHHHHHH
Confidence 4677888777777764 3334444567899999999965 789999999999877542 12 234678999999
Q ss_pred HHHhhcCCCCCCC-CCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHH
Q 014603 98 DYLNRDLPYKLSP-DDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAV 176 (422)
Q Consensus 98 ~~l~~~~~~~~~~-~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l 176 (422)
+++.+.+|+..++ ++|++++|+++++..++++++++||.|+++.|+|+.|...++..|.+++.+++++++++.+|++.+
T Consensus 741 ~~la~~~Gv~~d~~e~IIvt~Gs~elL~lll~aLl~pGD~VLVp~PtY~~Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~d~L 820 (1082)
T PLN02672 741 QFIKSNYGFPTDSCTEFVYGDTSLALFNKLVLCCVQEGGTLCFPAGSNGTYVSAAKFLKANFRRIPTKSSDGFKLTAKTL 820 (1082)
T ss_pred HHHHHHhCcCCCCCCEEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCChHHHHHHHHHcCCEEEEEecccccCCCCCHHHH
Confidence 9999988887765 589999999999999999999999999999999999999999999999999987667889999999
Q ss_pred HHhhcC-CceEEEEeCCC-CCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCC--CCcc----ccCC---CC
Q 014603 177 EALADE-NTVALVIINPG-NPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPF--VPMG----VFGS---IV 245 (422)
Q Consensus 177 ~~~~~~-~~~~i~i~~p~-nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~--~~~~----~~~~---~~ 245 (422)
++.+++ +.+++++++|+ ||||.+++.+++++|+++|++||++||+||+|+.+.|++... .++. .+.. ..
T Consensus 821 e~al~~~~~~~I~L~nPnhNPTG~v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~ 900 (1082)
T PLN02672 821 ASTLETVKKPWVYISGPTINPTGLLYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSF 900 (1082)
T ss_pred HHHhccCCCCEEEEECcCCCCcCccCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCc
Confidence 998865 45688999997 999999999999999999999999999999999888865421 1111 1111 23
Q ss_pred CeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhhhccCcchHHHHHHHHHHh-----hc-hHHHHHHHH
Q 014603 246 PVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQGAVPQILE-----KT-EEEFFSKIT 319 (422)
Q Consensus 246 ~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~-----~~-~~~~~~~~~ 319 (422)
++++++||||.|+++|+|+||+++++ +++++.+...... ..+....+.++..++. .. ...++.+.+
T Consensus 901 nVIvL~SfSKkf~lpGLRIGylIap~-------~eLi~~l~~~~~~-s~~~~~~q~Aaaaalall~~~~~~~~~~l~e~r 972 (1082)
T PLN02672 901 AVALLGGLSTELLSGGHEFGFLALND-------SVLIDAFHSAPGL-SRPHSTLKYTIKKLLGLKNQKSSDLLDGVAEQK 972 (1082)
T ss_pred eEEEEeCcHHhhccHHHHheeEEeCC-------HHHHHHHHHhhhh-cCCCcHHHHHHHHHHHHHhccCcHHHHHHHHHH
Confidence 68999999999999999999999864 3477777665432 2333344544444432 11 135677788
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCccc-----cc------C-CCCHHHHHHHHHHhcCeEEecCCCC
Q 014603 320 DILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSL-----LE------G-INSDMEFALKLAKEESVIVLPGITV 387 (422)
Q Consensus 320 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~-----~~------~-~~~~~~~~~~l~~~~gi~v~~g~~~ 387 (422)
+.++++++.+.+.|+++ ++. +..|.+|+|+|+.++... .. + ..++.++...++++.||.+.||..|
T Consensus 973 ~~Lk~rRd~L~e~L~~~-Gi~-v~~PeGGFfLwl~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~F 1050 (1082)
T PLN02672 973 KILKSRAERLKETLEAC-GWD-VLEPQGGISMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWT 1050 (1082)
T ss_pred HHHHHHHHHHHHHHHHC-CCe-EecCCcEEEEEEEccccccccccccccccccccCCCHHHHHHHHHHcCCEEEecCccc
Confidence 88999999999999998 777 558899999999764210 00 0 1256788888888889999999988
Q ss_pred CCCCeEEEEeccChHHHHHHHHHHHHHHH
Q 014603 388 GLKDWLRITFAVEPSALEDGLGRMKAFYD 416 (422)
Q Consensus 388 ~~~~~iRis~~~~~~~l~~~~~~l~~~~~ 416 (422)
+.++++||+++.+++++++++++|+++.+
T Consensus 1051 G~~g~~RIsfa~~~e~LeeALerL~kf~~ 1079 (1082)
T PLN02672 1051 GIPGYCRFSFALEDSEFDRALKAIARFKE 1079 (1082)
T ss_pred CCCCeEEEEecCCHHHHHHHHHHHHHHHH
Confidence 88899999999999999999999998664
No 67
>PLN02368 alanine transaminase
Probab=100.00 E-value=5.4e-45 Score=343.63 Aligned_cols=335 Identities=22% Similarity=0.369 Sum_probs=266.9
Q ss_pred cccHHHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCCC----CCC----------------------CCcHHHH
Q 014603 15 KANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAF----PSF----------------------RTASVAV 68 (422)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~----~~~----------------------~~~~~v~ 68 (422)
.++.|+.+++.+.++.+.....+. +.++.++|+|++|+|+.. ..+ .+++.+.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~a~~~--~~~g~~vi~l~iG~Pd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~~~i~ 87 (407)
T PLN02368 10 SLNENVKKCQYAVRGELYLRASEL--QKEGKKIIFTNVGNPHALGQKPLTFPRQVVALCQAPFLLDDPNVGLLFPADAIA 87 (407)
T ss_pred hcCHHHHhhhhhcCCHHHHHHHHH--HHHhhhhhcccCCChhHcCCCCchHHHHHHHHhcCchhcCCccccccCCHHHHH
Confidence 456788888877777666544433 225789999999998510 001 2455666
Q ss_pred HHHHHHhh-CCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhc-CCCCEEEecCCCccc
Q 014603 69 DAIVHSVR-SARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLA-RPGANILLPRPGFPY 146 (422)
Q Consensus 69 ~a~~~~~~-~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~-~~gd~Vl~~~~~~~~ 146 (422)
+++..... ......|++..|.++||++|++++.+.+|..+++++|++|+|+++++..++++++ ++||+|++++|+|+.
T Consensus 88 ~a~~~l~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~~ 167 (407)
T PLN02368 88 RAKHYLSLTSGGLGAYSDSRGLPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPL 167 (407)
T ss_pred HHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCcc
Confidence 66554222 2335689999999999999999999888888899999999999999999999987 799999999999999
Q ss_pred hHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC------CceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEE
Q 014603 147 YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE------NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVI 220 (422)
Q Consensus 147 ~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li 220 (422)
|...++..|.+++.++++.+++|.+|++.+++.+++ +++++++++|+||||.+++.+++++|+++|++||++||
T Consensus 168 y~~~~~~~g~~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II 247 (407)
T PLN02368 168 YSATISLLGGTLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLL 247 (407)
T ss_pred HHHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEE
Confidence 999999999999999987767789999999998763 67889999999999999999999999999999999999
Q ss_pred EcccccccccCCC-CCCCccc----cC----CCCCeEEEecCcccc-CCCCceeEEEEeeCCCCcccchhHHHHHHhhhh
Q 014603 221 ADEVYDHLAFGNT-PFVPMGV----FG----SIVPVLTLGSISKRW-IVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN 290 (422)
Q Consensus 221 ~D~~~~~~~~~~~-~~~~~~~----~~----~~~~~i~i~s~sK~~-~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (422)
+||+|..+.|++. .+.++.. +. ..+++++++||||+| +++|+|+||+++.+. .+++++.+.....
T Consensus 248 ~DE~Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~-----~~~li~~~~~~~~ 322 (407)
T PLN02368 248 GDEVYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNI-----PPKTVEEIYKVAS 322 (407)
T ss_pred EEccccccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCC-----CHHHHHHHHHHhc
Confidence 9999999998764 2333222 11 134799999999998 799999999985210 1467787777643
Q ss_pred hccCcchHHHHHHHHHHhhch------HHHH---HHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCc
Q 014603 291 ISSDPATFIQGAVPQILEKTE------EEFF---SKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNY 357 (422)
Q Consensus 291 ~~~~~~~~~~~a~~~~l~~~~------~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~ 357 (422)
...+++.++|.++.++|+... +.+. ++..+.++++++.+.+.|+++|++. +..|++++|+|++++-
T Consensus 323 ~~~~~~~~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g~~-~~~P~Gafy~~~~i~l 397 (407)
T PLN02368 323 IALSPNVSGQIFMGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSCKNVV-CNFTEGAMYSFPQIKL 397 (407)
T ss_pred ccCCCCcHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeE-eCCCCeeeEeccCCCC
Confidence 345678899999999997431 1233 4567889999999999999998988 4489999999987654
No 68
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=8.7e-45 Score=340.16 Aligned_cols=332 Identities=19% Similarity=0.291 Sum_probs=273.5
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 122 (422)
++.++|+|+.|.+. +++++.+++++.+.+.. .+.|+ ..|.+++|+++++++ ++++++|++|+|++++
T Consensus 27 ~~~~~i~l~~nen~----~~~~~~v~~a~~~~~~~--~~~Yp-~~g~~~Lr~aia~~~------~~~~~~I~vt~Gs~e~ 93 (366)
T PRK01533 27 GDHSFVKLASNENP----FGCSPRVLDELQKSWLD--HALYP-DGGATTLRQTIANKL------HVKMEQVLCGSGLDEV 93 (366)
T ss_pred CCCceEEeCCCCCC----CCCCHHHHHHHHHHHHh--cCcCC-CCCHHHHHHHHHHHh------CCCcceEEECCCHHHH
Confidence 45688999999955 78899999999887654 23565 568899999999998 5789999999999999
Q ss_pred HHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCH
Q 014603 123 IEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTY 202 (422)
Q Consensus 123 ~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~ 202 (422)
+..++++++++||+|++++|+|..|...++..|.+++.++.+ ++.+|++.+++.++++++++++++|+||||.+++.
T Consensus 94 i~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~---~~~~d~~~l~~~~~~~~~~v~i~~P~NPTG~~~~~ 170 (366)
T PRK01533 94 IQIISRAVLKAGDNIVTAGATFPQYRHHAIIEGCEVKEVALN---NGVYDLDEISSVVDNDTKIVWICNPNNPTGTYVND 170 (366)
T ss_pred HHHHHHHhcCCCCEEEEcCCcHHHHHHHHHHcCCEEEEeecC---CCCcCHHHHHHHhCcCCcEEEEeCCCCCCCCCcCH
Confidence 999999999999999999999999999999999999999874 34689999999888889999999999999999999
Q ss_pred HHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHH
Q 014603 203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIV 282 (422)
Q Consensus 203 ~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 282 (422)
+++++|+++|++++ ++|+||+|..+.+.+.....+..+...+++++++||||.|+++|+|+||++++ ++++
T Consensus 171 ~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~~--------~~~~ 241 (366)
T PRK01533 171 RKLTQFIEGISENT-LIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVGH--------EELI 241 (366)
T ss_pred HHHHHHHHhCCCCC-EEEEEccHHHhhccccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhCC--------HHHH
Confidence 99999999998866 57779999877654322222333444568999999999999999999999985 5788
Q ss_pred HHHHhhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccccC
Q 014603 283 DSIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEG 362 (422)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 362 (422)
+.+..... ..+.+.++|.++.++|++ ..+.++.++..+++++.+.+.++.+ ++. + .+..|+|+|++++
T Consensus 242 ~~l~~~~~-~~~~~~~~q~aa~~~l~~--~~~~~~~~~~~~~~r~~~~~~l~~~-g~~-~-~~~~~nf~~~~~~------ 309 (366)
T PRK01533 242 EKLNVVRL-PFNVSSLAQKAATIAFGD--DEFIEEIVRVNTEGLRQYESFCKEN-EIP-F-YQSQTNFIFLPVE------ 309 (366)
T ss_pred HHHHHhcC-CCCcCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHhC-CCc-c-CCCcCcEEEEeCC------
Confidence 88876653 357888999999999975 5778888888888888898888887 666 4 3446889999885
Q ss_pred CCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEeccChHHHHHHHHHHHHHHHHhcc
Q 014603 363 INSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALEDGLGRMKAFYDRHAK 420 (422)
Q Consensus 363 ~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~l~~~~~~l~~~~~~~~~ 420 (422)
+..++...+ .++||.|++ | .+++||+++.. ++.++++++|+++++..+.
T Consensus 310 --~~~~~~~~l-~~~GI~Vr~---~--~~~iRis~~~~-~~~~~l~~al~~~~~~~~~ 358 (366)
T PRK01533 310 --NGGEIYEAC-AHAGFIIRP---F--PNGVRITVGTR-EQNEGVISVLQQHFENKKR 358 (366)
T ss_pred --CHHHHHHHH-HHCCcEEcc---C--CCceEEeCCCH-HHHHHHHHHHHHHHHhccc
Confidence 245666655 567999997 3 57899998754 6888899998888766543
No 69
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.8e-44 Score=337.52 Aligned_cols=329 Identities=22% Similarity=0.353 Sum_probs=272.8
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 122 (422)
.+.++|+|+.|.+. ++++|.+.+++.+.+.. ...|++ .+.++||+++++++ ++++++|++|+|++++
T Consensus 28 ~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~--~~~Y~~-~~~~~lr~~ia~~~------~~~~~~I~it~G~~~a 94 (357)
T PRK14809 28 DPDDLVKLSSNENP----HGPSPAAVEAIREAAER--VHSYPK-ASHADLTAALADRW------DVSPEQVWLANGGDGA 94 (357)
T ss_pred CccceeEecCCCCC----CCCCHHHHHHHHHHHhh--hhcCCC-CCHHHHHHHHHHHh------CCCcceEEECCCHHHH
Confidence 35689999999855 67788899999887653 457865 67899999999998 5789999999999999
Q ss_pred HHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCH
Q 014603 123 IEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTY 202 (422)
Q Consensus 123 ~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~ 202 (422)
+..++++++++||.|++++|+|..+...+...|.+++.+++..++++.++.+.+++.. ++++++++++|+||||.++|.
T Consensus 95 l~~~~~~~~~~gd~V~v~~P~y~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~-~~~k~i~l~~p~NPTG~~~s~ 173 (357)
T PRK14809 95 LDYLARAMLDPGDTVLVPDPGFAYYGMSARYHHGEVREYPVSKADDFEQTADTVLDAY-DGERIVYLTSPHNPTGSEIPL 173 (357)
T ss_pred HHHHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEEecccCcCCCcCHHHHHHhh-cCCcEEEEeCCCCCCCcCCCH
Confidence 9999999999999999999999988888888999999998865566778888877655 357899999999999999999
Q ss_pred HHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHH
Q 014603 203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIV 282 (422)
Q Consensus 203 ~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 282 (422)
+++++|+++|++ +++||+||+|..+.+.+. .+..+...+++++++||||.|+++|+|+||++++ ++++
T Consensus 174 ~~~~~l~~~~~~-~~~iI~De~y~~~~~~~~---~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~--------~~~~ 241 (357)
T PRK14809 174 DEVEALAERTDE-ETLVVVDEAYGEFAERPS---AVALVEERDDVAVLRTFSKAYGLAGLRLGYAVVP--------EEWA 241 (357)
T ss_pred HHHHHHHHhCcc-CcEEEEechhhhccCCch---hHHHHhhCCCEEEEecchhHhcCcchhheeeecC--------HHHH
Confidence 999999999975 789999999998775432 1222334568999999999999999999999986 4677
Q ss_pred HHHHhhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccccC
Q 014603 283 DSIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEG 362 (422)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 362 (422)
+++..... ....+.+.|.++..+|.+ +.++++.++.++++++.+.+.|+.. . .|.+|+|+|++++
T Consensus 242 ~~~~~~~~-~~~~~~~~~~~a~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~-----~-~~~~g~f~~~~~~------ 306 (357)
T PRK14809 242 DAYARVNT-PFAASELACRAGLAALDD--DEHVERTVETARWAREYIREELDAP-----T-WESAGNFVLAEVG------ 306 (357)
T ss_pred HHHHHhCC-CCCCCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHhcCc-----c-CCCCCCEEEEECC------
Confidence 77776543 345678888888888865 5788888889999999999888653 1 3567899999874
Q ss_pred CCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEeccChHHHHHHHHHHHHHHH
Q 014603 363 INSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALEDGLGRMKAFYD 416 (422)
Q Consensus 363 ~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~l~~~~~~l~~~~~ 416 (422)
+..++...+ +++||.|.||..|+..+++||+++. .+++++++++|+++++
T Consensus 307 --~~~~~~~~l-~~~gv~v~~g~~f~~~~~iRls~~~-~~~~~~~l~~L~~~l~ 356 (357)
T PRK14809 307 --DASAVAEAA-QERGVIVRDCTSFGLPECIRITCGT-REETERAVEVLNEVLA 356 (357)
T ss_pred --CHHHHHHHH-HHCCEEEEECccCCCCCeEEEecCC-HHHHHHHHHHHHHHhc
Confidence 356666664 6779999999999888999999875 6899999999998874
No 70
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.3e-44 Score=340.31 Aligned_cols=331 Identities=20% Similarity=0.268 Sum_probs=274.6
Q ss_pred CCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHH
Q 014603 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI 123 (422)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~ 123 (422)
..++++|+.|.+. +++++.+.+++.+.+.. . .|.+..|.+++|+++++++ ++++++|++|+|+++++
T Consensus 28 ~~~~i~l~~n~~~----~~~~~~v~~a~~~~~~~--~-~~~p~~g~~~lr~~ia~~~------~~~~~~i~~t~G~~~~l 94 (359)
T PRK03158 28 LEKIVKLASNENP----YGPSPKVKEAIAAHLDE--L-ALYPDGYAPELRTKVAKHL------GVDEEQLLFGAGLDEVI 94 (359)
T ss_pred CCceEEecCCCCC----CCCCHHHHHHHHHHHHH--h-hcCCCCcHHHHHHHHHHHh------CCCHHHEEECCCHHHHH
Confidence 4578999999855 56788999999887754 2 4555578999999999999 56789999999999999
Q ss_pred HHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHH
Q 014603 124 EVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQ 203 (422)
Q Consensus 124 ~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~ 203 (422)
..++++++++||+|++++|+|+.+...+...|.+++.++.+ ++.+|++.+++.++++++++++++|+||||.+++.+
T Consensus 95 ~~~~~~~~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~---~~~~d~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~ 171 (359)
T PRK03158 95 QMISRALLNPGTNTVMAEPTFSQYRHNAIIEGAEVREVPLK---DGGHDLEAMLKAIDEQTKIVWICNPNNPTGTYVNHE 171 (359)
T ss_pred HHHHHHHhCCCCEEEEcCCCHHHHHHHHHHcCCeEEEEecC---CCCcCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCHH
Confidence 99999999999999999999999999899999999999875 356899999988888889999999999999999999
Q ss_pred HHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHH
Q 014603 204 HLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVD 283 (422)
Q Consensus 204 ~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~ 283 (422)
++.++++.|+ +|++||+||+|..+.+.+.....+...+..+++++++||||.|+++|+|+||++++ +++++
T Consensus 172 ~l~~~~~~~~-~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~--------~~~~~ 242 (359)
T PRK03158 172 ELLSFLESVP-SHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAALRVGYGIAS--------EELIE 242 (359)
T ss_pred HHHHHHHhCC-CCcEEEEECchHhhcCCcccccHHHHHHhcCCEEEEEechHhhcCcchhhehhcCC--------HHHHH
Confidence 9999988874 69999999999988765433322233344467999999999999999999999986 56788
Q ss_pred HHHhhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccccCC
Q 014603 284 SIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGI 363 (422)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 363 (422)
++...... .+++.++|.++..+|++ ..++++.++.++++++.+.+.|+++ ++. + .|.+|+|+|++++.
T Consensus 243 ~~~~~~~~-~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~l~~~-~~~-~-~~~~g~~i~~~~~~------ 310 (359)
T PRK03158 243 KLNIARPP-FNTTRIAQYAAIAALED--QAFLKECVEKNAEGLEQYYAFCKEY-GLF-Y-YPSQTNFIFVDTGR------ 310 (359)
T ss_pred HHHHhcCC-CCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCe-e-CCCcCcEEEEECCC------
Confidence 88766543 46788999999999975 4677888888888999999999887 665 3 46668899998752
Q ss_pred CCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEeccChHHHHHHHHHHHHH
Q 014603 364 NSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALEDGLGRMKAF 414 (422)
Q Consensus 364 ~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~l~~~~~~l~~~ 414 (422)
++.++...++ ++||.+.||..|+.++++||+++ +.++.++++++|+++
T Consensus 311 -~~~~~~~~l~-~~gv~v~~g~~f~~~~~iRi~~~-~~~~~~~l~~al~~~ 358 (359)
T PRK03158 311 -DANELFEALL-KKGYIVRSGAALGFPTGVRITIG-LKEQNDKIIELLKEL 358 (359)
T ss_pred -CHHHHHHHHH-HCCeEEeeCCCCCCCCeEEEecC-CHHHHHHHHHHHHHh
Confidence 4667777765 56999999999987899999988 467888888888765
No 71
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=1.5e-43 Score=332.18 Aligned_cols=345 Identities=19% Similarity=0.296 Sum_probs=276.7
Q ss_pred ccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCC
Q 014603 26 ITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLP 105 (422)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~ 105 (422)
..++++++...+.. ..+.++++|+.|+|. .++++.+.+++.+... ...|++..|.+++|+++++++.+.+|
T Consensus 4 ~~~~~~~~~~~~~~--~~~~~~i~l~~~~p~----~~~~~~~~~~~~~~~~---~~~Y~~~~G~~~lr~~ia~~~~~~~~ 74 (357)
T TIGR03539 4 FPWDSLAPYKAKAA--SHPDGIVDLSVGTPV----DPVPPLIRAALAAAAD---APGYPQTWGTPELREAIVDWLERRRG 74 (357)
T ss_pred chHHHHHHHHHHhh--hCCCCeEEccCCCCC----CCCCHHHHHHHHHHHh---hCCCCcccCCHHHHHHHHHHHHHhcC
Confidence 44666666554442 246788999999865 4667888888876543 35799889999999999999998888
Q ss_pred CC-CCCCCEEEecCHHHHHHHHHHHh-cCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCC
Q 014603 106 YK-LSPDDVYLTLGCTQAIEVILTVL-ARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADEN 183 (422)
Q Consensus 106 ~~-~~~~~i~~~~g~~~a~~~~~~~l-~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~ 183 (422)
+. +++++|++|+|+++++..++..+ +++||.|++++|+|+.+...++..|.+++.++ +++.+. .++
T Consensus 75 ~~~~~~~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~---------~~~~l~---~~~ 142 (357)
T TIGR03539 75 VPGLDPTAVLPVIGTKELVAWLPTLLGLGPGDTVVIPELAYPTYEVGALLAGATPVAAD---------DPTELD---PVG 142 (357)
T ss_pred CCCCCcCeEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcHHHHHHHHhcCCEEeccC---------ChhhcC---ccC
Confidence 86 99999999999999999998887 79999999999999999988888898877653 222222 247
Q ss_pred ceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccc--c-CCCCCeEEEecCccccCCC
Q 014603 184 TVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGV--F-GSIVPVLTLGSISKRWIVP 260 (422)
Q Consensus 184 ~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~--~-~~~~~~i~i~s~sK~~~~~ 260 (422)
++++++++|+||||.+++.+++++|+++|+++|++||+||+|..+.+++.....+.. . ...+++++++||||.|+++
T Consensus 143 ~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~ 222 (357)
T TIGR03539 143 PDLIWLNSPGNPTGRVLSVDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLA 222 (357)
T ss_pred ccEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCccceecccCCCccccEEEEeccccccCCC
Confidence 889999999999999999999999999999999999999999988776532211111 0 1124689999999999999
Q ss_pred CceeEEEEeeCCCCcccchhHHHHHHhhhhh-ccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 014603 261 GWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCI 339 (422)
Q Consensus 261 G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 339 (422)
|+|+||++++ +++++.+...... ..+++.+.|.++..+|++ ..++.+.++.++++++.+.+.|++. ++
T Consensus 223 G~R~G~~i~~--------~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~L~~~-g~ 291 (357)
T TIGR03539 223 GYRAGFVAGD--------PALVAELLTVRKHAGLMVPAPVQAAMVAALGD--DGHVAEQKARYAARRAQLKPALEKA-GF 291 (357)
T ss_pred ceeEEEEecC--------HHHHHHHHHHHhhcccCCCHHHHHHHHHHcCC--HHHHHHHHHHHHHHHHHHHHHHHHc-CC
Confidence 9999999975 4677777665532 346788899999888865 4667778888999999999999986 67
Q ss_pred CCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEeccChHHHHHHHHHH
Q 014603 340 TCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAVEPSALEDGLGRM 411 (422)
Q Consensus 340 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRis~~~~~~~l~~~~~~l 411 (422)
. +..|.+|+|+|+.++. +..++...+ .++||.|.||..|+. ++++|||++.+++++++++++|
T Consensus 292 ~-~~~p~~~~~~~~~~~~-------~~~~~~~~l-~~~gV~v~pg~~f~~~~~~~iRis~~~~~~~i~~~~~~l 356 (357)
T TIGR03539 292 R-IDHSEAGLYLWATRGE-------DAWDTVDRL-AELGILVAPGDFYGPAGSQHVRVALTATDERIAAAVARL 356 (357)
T ss_pred C-CcCCCccEEEEEECCC-------CHHHHHHHH-HhCCEEECCccccCCCCCCeEEEEecCCHHHHHHHHHhh
Confidence 6 5578889999998753 355565554 677999999988764 5799999998889999999876
No 72
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=100.00 E-value=1.2e-43 Score=338.55 Aligned_cols=377 Identities=20% Similarity=0.304 Sum_probs=277.8
Q ss_pred cHHHHHHHHHhhhhccCCC-------CceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHH-H
Q 014603 27 TVRGVLNSLLENLNKNDTR-------PLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIA-D 98 (422)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~-------~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia-~ 98 (422)
...++.+++..++..+.+. ++|+|+.|.|. ++++ ++.+++.+.+.. ..|+++.+..+++++++ +
T Consensus 69 ~~~g~~~r~~~~~~~~~~~~g~~~l~~~i~l~~g~p~----~~~~-~~~~~~~~~~~~---~~Y~~p~g~~~~~e~iv~~ 140 (521)
T TIGR03801 69 QKEGIEERFETFLAENKSQPGAEFLRDIISYVIDQLG----FDPD-AFLYEMCDGIIG---DNYPVPDRMLPHSEKIVHQ 140 (521)
T ss_pred CcchHHHHHHHHHHhCCCCchHHHHHHHHhhcCCCCC----CCCC-HHHHHHHHHhhc---CCCCCCCCCHHHHHHHHHH
Confidence 3455677777766554433 36899999976 5654 444666665533 25876677777777777 5
Q ss_pred HHhhcCCCC-CCCC--CEEEecCHHHHHHHHHHH-----hcCCCCEEEecCCCccchHHHHhhC--CCeEEEeeccCCCC
Q 014603 99 YLNRDLPYK-LSPD--DVYLTLGCTQAIEVILTV-----LARPGANILLPRPGFPYYEARATHS--HLEVRHFDLLPAKG 168 (422)
Q Consensus 99 ~l~~~~~~~-~~~~--~i~~~~g~~~a~~~~~~~-----l~~~gd~Vl~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~ 168 (422)
++.+.++.. ..++ +|++|+|+++|+..++.+ ++.|||+|+++.|+|+.|...+... |..++.++.++.++
T Consensus 141 y~~~~~~~~~~~~~~~~V~it~Gat~al~~~~~~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~~~~~~ 220 (521)
T TIGR03801 141 YLIQEMCGNKPPPGEFDLFAVEGGTAAMCYIFDSLKANELLKKGDKIALMTPIFTPYLEIPELPRYDFEVVRIKADEMTE 220 (521)
T ss_pred HHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHHhHhhcCCCCCEEEEeCCCcHHHHHHHHHhcCCcEEEEeecccccc
Confidence 666654433 2333 899999999999999887 6899999999999999999887775 56666666654333
Q ss_pred -----cccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHc--CcEEEEcccccccccCCCCCCCcccc
Q 014603 169 -----WEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKL--GIMVIADEVYDHLAFGNTPFVPMGVF 241 (422)
Q Consensus 169 -----~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~--~~~li~D~~~~~~~~~~~~~~~~~~~ 241 (422)
|.+|+++++++++++++++++++|+||||.+++.+++++|+++|+++ +++||+||+|..+.+. +.++...
T Consensus 221 ~g~~~~~~d~~~l~~~~~~~~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~---~~sl~~~ 297 (521)
T TIGR03801 221 DGTHTWQYPDKELEKLRDPSIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVDD---FRSLFAE 297 (521)
T ss_pred cccccCCCCHHHHHHhcCCCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhccc---ccchhhh
Confidence 88999999998888999999999999999999999999999999986 9999999999987642 2233332
Q ss_pred CCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccc------hh--------------------HHHHH----Hhhh-h
Q 014603 242 GSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQD------SG--------------------IVDSI----KSFL-N 290 (422)
Q Consensus 242 ~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~------~~--------------------~~~~~----~~~~-~ 290 (422)
. .++++++.||||.|+++|+|+||+++++.+ +++. ++ +++++ +... +
T Consensus 298 ~-~~~vI~v~SfSK~fg~~G~RlG~i~~~~~~-v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~ 375 (521)
T TIGR03801 298 L-PYNTIGVYSFSKYFGATGWRLGTIALHKDN-IFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALN 375 (521)
T ss_pred C-CCCEEEEEcchhhccCchhhhhhhhcCchH-HHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHh
Confidence 2 257999999999999999999999986421 1100 00 11111 1111 2
Q ss_pred hccCcchHHHH-----HHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccc-----
Q 014603 291 ISSDPATFIQG-----AVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLL----- 360 (422)
Q Consensus 291 ~~~~~~~~~~~-----a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~----- 360 (422)
.+.+.+.+.|. ++.++++. .+.+.++.++.++++++.+.+.| .+ .+. ...|.+++|+|+.++....
T Consensus 376 ~~~g~s~p~Q~q~al~a~~all~~-~~~y~~~~~~~~~~R~~~l~~~L-g~-~~~-~~~~~g~~Y~~~di~~~~~~~~~~ 451 (521)
T TIGR03801 376 HTAGLSTPQQVQMALFSLFALMDK-ENAYKAETKDICRRREKLLFRGL-GL-PLQ-EDPNDVAYYTLIDLEEWAEKNYGE 451 (521)
T ss_pred ccCCCCcHHHHHHHHHHHHHHhcc-chhHHHHHHHHHHHHHHHHHHhc-CC-CCc-CCCCCeEEEEEeehHHHHHHhcch
Confidence 23455666665 33444543 35788999999999999999888 22 122 2357889999999874210
Q ss_pred ------cCCCCHHHHHHHHHHhcCeEEecCCCCCC-CCeEEEEec-cChHHHHHHHHHHHHHHHHhcc
Q 014603 361 ------EGINSDMEFALKLAKEESVIVLPGITVGL-KDWLRITFA-VEPSALEDGLGRMKAFYDRHAK 420 (422)
Q Consensus 361 ------~~~~~~~~~~~~l~~~~gi~v~~g~~~~~-~~~iRis~~-~~~~~l~~~~~~l~~~~~~~~~ 420 (422)
....++.+++.+|+++.||.+.||..|+. ++++|||++ .+++++.++.++|++++++|..
T Consensus 452 ~f~~~l~~~~~~~~~~~~L~~e~gV~v~PG~~Fg~~~~~vRisla~l~~~~~~~~~~rl~~~~~~~~~ 519 (521)
T TIGR03801 452 EFSSYLKKNYSPVDVLFRLAEETGIVLLPGGGFGGPEWSVRVSLANLNEYDYAEIGRAIRKILDEYYE 519 (521)
T ss_pred HHHHHHhccCCHHHHHHHHHHhCCEEEeCchhcCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHH
Confidence 01125678999999999999999999986 568999999 6889999999999999988864
No 73
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=1e-43 Score=332.42 Aligned_cols=334 Identities=19% Similarity=0.329 Sum_probs=269.9
Q ss_pred CCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHH
Q 014603 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI 123 (422)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~ 123 (422)
..+++||+.|.+. +++++.+.+++.+.+.. ...|++. +.+++|+++++++ ++++++|++|+|+++++
T Consensus 18 ~~~~~~l~~~~~~----~~~p~~~~~a~~~~~~~--~~~Y~~~-~~~~lr~~ia~~~------~~~~~~i~it~Ga~~~l 84 (354)
T PRK06358 18 KNMILDFSANINP----LGVPESLKQAITENLDK--LVEYPDP-DYLELRKRIASFE------QLDLENVILGNGATELI 84 (354)
T ss_pred ccceEEecCCCCC----CCCCHHHHHHHHHHHHh--hhcCCCc-cHHHHHHHHHHHh------CCChhhEEECCCHHHHH
Confidence 3457999998754 45678999999887643 4578764 5789999999998 57899999999999999
Q ss_pred HHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHH
Q 014603 124 EVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQ 203 (422)
Q Consensus 124 ~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~ 203 (422)
..+++++ .+ ++|++++|+|+.+...++..|.+++.++.+.++++.+| +.+.+.+.++++++++++|+||||.+++.+
T Consensus 85 ~~~~~~~-~~-~~v~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d-~~~~~~~~~~~~~v~~~~P~NPtG~~~~~~ 161 (354)
T PRK06358 85 FNIVKVT-KP-KKVLILAPTFAEYERALKAFDAEIEYAELTEETNFAAN-EIVLEEIKEEIDLVFLCNPNNPTGQLISKE 161 (354)
T ss_pred HHHHHHh-CC-CcEEEecCChHHHHHHHHHcCCeeEEEeCccccCCCcc-HHHHHhhccCCCEEEEeCCCCCCCCccCHH
Confidence 9999987 44 68999999999999999999999999998766677888 666665666789999999999999999999
Q ss_pred HHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHH
Q 014603 204 HLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVD 283 (422)
Q Consensus 204 ~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~ 283 (422)
++++|+++|+++|++||+||+|..+.+++.....+..++..+++++++||||.|+++|+|+||+++++ +.+.+
T Consensus 162 ~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~~-------~~~~~ 234 (354)
T PRK06358 162 EMKKILDKCEKRNIYLIIDEAFMDFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSN-------KNLAE 234 (354)
T ss_pred HHHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhccCCCCEEEEEechhhccCcchhheeeecCC-------HHHHH
Confidence 99999999999999999999999988766433333344455789999999999999999999999853 35667
Q ss_pred HHHhhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccccCC
Q 014603 284 SIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGI 363 (422)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 363 (422)
.+..... ..+.+.+.|.++..+|++ ..++++.++.++++++.+.+.|++++++. +..|. |.|+|++++.
T Consensus 235 ~~~~~~~-~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~~~~~-g~f~~~~~~~------ 303 (354)
T PRK06358 235 KLLQMRE-PWSINTFADLAGQTLLDD--KEYIKKTIQWIKEEKDFLYNGLSEFKGIK-VYKPS-VNFIFFKLEK------ 303 (354)
T ss_pred HHHHhCC-CCcchHHHHHHHHHHhcc--HHHHHHHHHHHHHHHHHHHHHHhcCCCcE-EcCCc-ceEEEEEcCc------
Confidence 7766553 346678899999999964 46778888999999999999999987766 43554 5699998863
Q ss_pred CCHHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEeccChHHHHHHHHHHHHHH
Q 014603 364 NSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAVEPSALEDGLGRMKAFY 415 (422)
Q Consensus 364 ~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRis~~~~~~~l~~~~~~l~~~~ 415 (422)
..++...++ ++||.+.||..|+. .+++||+++.+ ++.+++++.|++++
T Consensus 304 --~~~~~~~l~-~~gI~v~~~~~f~~~~~~~iRls~~~~-~~~~~l~~~l~~~~ 353 (354)
T PRK06358 304 --PIDLRKELL-KKGILIRSCSNYRGLDENYYRVAVKSR-EDNKKLLKALEVIL 353 (354)
T ss_pred --hHHHHHHHH-HCCeEEEECCCCCCCCCCEEEEEeCCH-HHHHHHHHHHHHHh
Confidence 456777665 56999999998853 47899998754 56667777766654
No 74
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.4e-43 Score=334.18 Aligned_cols=336 Identities=21% Similarity=0.314 Sum_probs=270.1
Q ss_pred CceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCC-CCCCCCCCCCHHHHHHHHHHHhhcC--CCCCCCCCEEEecCHHHH
Q 014603 46 PLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSAR-FNCYSSTVGILPARRAIADYLNRDL--PYKLSPDDVYLTLGCTQA 122 (422)
Q Consensus 46 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~y~~~~g~~~lr~~ia~~l~~~~--~~~~~~~~i~~~~g~~~a 122 (422)
.+++|+.|.+. +++++.+.+++.+.+.... ...|++ .|.++||++|++++++.+ ++.+++++|++|+|++++
T Consensus 29 ~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~Y~~-~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga~~a 103 (374)
T PRK02610 29 QLDRLDTNEFP----YDLPPDLKQKLAWLYQQGIESNRYPD-GGHEALKQAIAEYVNESAAGSSQITPANISVGNGSDEL 103 (374)
T ss_pred ceeEecCCCCC----CCCCHHHHHHHHHHHhhcccccCCCC-CchHHHHHHHHHHhCccccccCCCCHHHEEEcCChHHH
Confidence 58999999865 6888999999998776532 356865 689999999999998765 466899999999999999
Q ss_pred HHHHHHHhcCCCC-EEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhc----CCceEEEEeCCCCCcc
Q 014603 123 IEVILTVLARPGA-NILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALAD----ENTVALVIINPGNPCG 197 (422)
Q Consensus 123 ~~~~~~~l~~~gd-~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~----~~~~~i~i~~p~nptG 197 (422)
+..++.+++.+|| .|++++|+|..+...++..|.+++.++.+. +++++|++.|++.++ ++++++++++||||||
T Consensus 104 l~~~~~~~~~~g~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~~~~~~~~~~k~i~l~~P~NPTG 182 (374)
T PRK02610 104 IRSLLIATCLGGEGSILVAEPTFSMYGILAQTLGIPVVRVGRDP-ETFEIDLAAAQSAIEQTQNPPVRVVFVVHPNSPTG 182 (374)
T ss_pred HHHHHHHHcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEecCCc-ccCCCCHHHHHHHHHhhcCCCceEEEEeCCCCCCC
Confidence 9988888777786 899999999999999999999999998753 457899999998875 4789999999999999
Q ss_pred cccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCccc
Q 014603 198 NVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQ 277 (422)
Q Consensus 198 ~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~ 277 (422)
.+++.+++++|.++| +|++||+||+|..+.+. . .+..+...+++++++||||.|++||+|+||++++
T Consensus 183 ~~~s~~~l~~l~~~~--~~~~iI~De~Y~~~~~~--~--~~~~~~~~~~~ivi~SfSK~~g~~GlRiG~~v~~------- 249 (374)
T PRK02610 183 NPLTAAELEWLRSLP--EDILVVIDEAYFEFSQT--T--LVGELAQHPNWVILRTFSKAFRLAAHRVGYAIGH------- 249 (374)
T ss_pred CCCCHHHHHHHHhcc--CCcEEEEeccccccCcc--c--hHHHHhcCCCEEEEEecchhccCcccceeeeecC-------
Confidence 999999999999987 39999999999886532 1 1223333457899999999999999999999985
Q ss_pred chhHHHHHHhhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCc
Q 014603 278 DSGIVDSIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNY 357 (422)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~ 357 (422)
+++++.+...... .+.+.+.|.++..+++. .+.+.+..+..++ .++.+.+.|+.++++. + .|++|+|+|++++.
T Consensus 250 -~~l~~~l~~~~~~-~~~~~~~q~a~~~~l~~-~~~~~~~~~~~~~-~r~~l~~~L~~~~~~~-~-~p~~g~f~~~~l~~ 323 (374)
T PRK02610 250 -PELIAVLEKVRLP-YNLPSFSQLAAQLALEH-RQELLAAIPEILQ-ERDRLYQALQELPQLR-V-WPSAANFLYLRLSQ 323 (374)
T ss_pred -HHHHHHHHHhcCC-CCCCHHHHHHHHHHhcC-HHHHHHHHHHHHH-HHHHHHHHHHhCCCcE-e-CCCcceEEEEeCCC
Confidence 4678887766532 35678899999888875 2455555554444 4777888998887766 4 58889999999874
Q ss_pred ccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEeccChHHHHHHHHHHHHHHHHh
Q 014603 358 SLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 358 ~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~l~~~~~~l~~~~~~~ 418 (422)
. .++.++...+ .++||.|.++ .+++||+++.+ +++++++++|+++++++
T Consensus 324 ~-----~~~~~~~~~l-~~~gi~v~~~-----~~~lRls~~~~-~~~~~~l~~l~~~l~~~ 372 (374)
T PRK02610 324 D-----AALAALHQAL-KAQGTLVRHT-----GGGLRITIGTP-EENQRTLERLQAALTQL 372 (374)
T ss_pred C-----CCHHHHHHHH-HHCCEEEEeC-----CCeEEEeCCCH-HHHHHHHHHHHHHHhhc
Confidence 2 1456666665 6779999864 46899999864 57899999999988764
No 75
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=100.00 E-value=4.4e-43 Score=336.19 Aligned_cols=355 Identities=22% Similarity=0.320 Sum_probs=269.5
Q ss_pred CCCceeecCCCCCCCCCCCC-cHHHHHHHHHHhhCC----CCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecC
Q 014603 44 TRPLIPLGHGDPSAFPSFRT-ASVAVDAIVHSVRSA----RFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLG 118 (422)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~-~~~v~~a~~~~~~~~----~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g 118 (422)
..++|+|+.|.|.. .+. .+.+.+++.+.+... ....|++..|.++||++|++++.+.+|+++++++|++|+|
T Consensus 29 ~~~~i~l~~g~p~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~~~I~it~G 105 (416)
T PRK09440 29 TPGAIMLGGGNPAH---IPEMEDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNISPQNIALTNG 105 (416)
T ss_pred CCCceeccCCCCCc---cCCHHHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccC
Confidence 46789999999763 232 346667777665442 2357999999999999999999988888899999999999
Q ss_pred HHHHHHHHHHHhcC-----CCCEEEe-cCCCccchHHHHhhCC----CeEEEeeccCCC-CcccCHHHHHHhhcCCceEE
Q 014603 119 CTQAIEVILTVLAR-----PGANILL-PRPGFPYYEARATHSH----LEVRHFDLLPAK-GWEVDLDAVEALADENTVAL 187 (422)
Q Consensus 119 ~~~a~~~~~~~l~~-----~gd~Vl~-~~~~~~~~~~~~~~~g----~~~~~~~~~~~~-~~~~d~~~l~~~~~~~~~~i 187 (422)
+++++..++++++. +||.|++ ++|+|++|...+...+ .....+++..++ ++.+|++.|+ +.++++++
T Consensus 106 a~~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~~~~~~i 183 (416)
T PRK09440 106 SQSAFFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIELLPEGQFKYHVDFEHLH--IDEDTGAI 183 (416)
T ss_pred hHHHHHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhccCceeecccccccccccccccCCCHHHcc--cCCCceEE
Confidence 99999999999985 5899999 7999999987655333 222233332211 3678999887 35578899
Q ss_pred EEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEE
Q 014603 188 VIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWL 267 (422)
Q Consensus 188 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~ 267 (422)
++++|+||||.+++.+++++|+++|+++|++||+||+|...... ........ ...+++++++||||+ ++||+|+||+
T Consensus 184 ~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~-~~~~~~~~-~~~~~vI~~~SfSK~-~~pGlRiG~~ 260 (416)
T PRK09440 184 CVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPG-IIFSEATP-LWNPNIILCMSLSKL-GLPGVRCGIV 260 (416)
T ss_pred EEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCC-cchhhcCc-cccCCeEEEeccccc-CCCcceEEEE
Confidence 99999999999999999999999999999999999999753211 00111111 114679999999997 9999999999
Q ss_pred EeeCCCCcccchhHHHHHHhhhhh-ccCcchHHHHHHHHHHhhch-HHHHHH-HHHHHHHHHHHHHHHhhcC-CC--CCC
Q 014603 268 VTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQGAVPQILEKTE-EEFFSK-ITDILRETADICCDRLKEI-PC--ITC 341 (422)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~-~~~~~~-~~~~~~~~~~~l~~~L~~~-~~--~~~ 341 (422)
+++ +++++++...... ..+++.+.|.++..+|++.. ..+..+ .++.++++++.+++.|++. ++ +.
T Consensus 261 i~~--------~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~l~~~~~~- 331 (416)
T PRK09440 261 IAD--------EEIIEALSNMNGIISLAPGRLGPAIAAEMIESGDLLRLSETVIRPFYRQKVQLAIALLRRYLPDEPCL- 331 (416)
T ss_pred eCC--------HHHHHHHHHHHHHhccCCCcHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCeE-
Confidence 986 4678888776643 34678899999999998643 233333 5667788888888888764 33 33
Q ss_pred CCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC---------CCeEEEEeccChHHHHHHHHHHH
Q 014603 342 PKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL---------KDWLRITFAVEPSALEDGLGRMK 412 (422)
Q Consensus 342 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~---------~~~iRis~~~~~~~l~~~~~~l~ 412 (422)
+..|.+|+|+|+.++... .++.++...+ .++||.|.||..|+. .+++|||++.+++++++++++|.
T Consensus 332 ~~~p~gg~fiw~~~~~~~----~~~~~~~~~l-~~~gV~v~pg~~F~~~~~~~~~~~~~~iRis~~~~~~~l~~~i~~l~ 406 (416)
T PRK09440 332 IHKPEGAIFLWLWFKDLP----ITTEELYQRL-KARGVLVVPGHYFFPGLDEDWPHAHQCIRMNYVQDDEEIEKGIAILA 406 (416)
T ss_pred EecCCCceEEEEECCCCC----CCHHHHHHHH-HHCCEEEechHhhCCCCccccCCcCceEEEEecCCHHHHHHHHHHHH
Confidence 347888999999987411 1456666654 677999999988743 25899999878899999999999
Q ss_pred HHHHHhcc
Q 014603 413 AFYDRHAK 420 (422)
Q Consensus 413 ~~~~~~~~ 420 (422)
+++++..+
T Consensus 407 ~~~~~~~~ 414 (416)
T PRK09440 407 EEVEKAYA 414 (416)
T ss_pred HHHHHHhh
Confidence 99987543
No 76
>PLN02397 aspartate transaminase
Probab=100.00 E-value=4.3e-43 Score=334.75 Aligned_cols=366 Identities=18% Similarity=0.203 Sum_probs=269.3
Q ss_pred HHhhccCccHHHHHHHHHhhhhccCCCCceeecCCC-CCCCCCCC-CcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHH
Q 014603 19 ELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGD-PSAFPSFR-TASVAVDAIVHSVRSARFNCYSSTVGILPARRAI 96 (422)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~-~~~~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~i 96 (422)
++...+.+.|+.+.+.+.+. .....++|+.|+ |+. ..++ ..+.+.++..+.+.......|++..|.++||+++
T Consensus 26 ~~~~~~~~~i~~~~~~~~~~----~~~~~l~l~~g~~p~~-~~~p~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~LR~ai 100 (423)
T PLN02397 26 HVEPAPPDPILGVTEAFLAD----PSPVKLNLGVGAYRTE-EGKPVVLNVVRKAEQRLLAGSRNKEYLPIEGLAEFNKLS 100 (423)
T ss_pred cCCcCCCChHHHHHHHHhhC----CCcceEecccceeeCC-CCCcccchHHHHHHHHhhccCCCCCCCCcCCCHHHHHHH
Confidence 45667777788877655443 456789999996 442 1111 1345666654444333444799999999999999
Q ss_pred HHHHhhcCCCCCCCCCEEE--ecCHHHH--HHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccC
Q 014603 97 ADYLNRDLPYKLSPDDVYL--TLGCTQA--IEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVD 172 (422)
Q Consensus 97 a~~l~~~~~~~~~~~~i~~--~~g~~~a--~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d 172 (422)
++++.+..+....+++|.. +.+++++ +...+..++.|||+|++++|+|+.|...++..|.+++.+++.+.+++++|
T Consensus 101 a~~~~~~~~~~~~~~~i~~~~i~~g~Ga~~l~~~~~~~~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~v~l~~~~~~~~d 180 (423)
T PLN02397 101 AKLAYGADSPAIKENRVATVQCLSGTGSLRLGAEFLARFYPGSTIYIPNPTWGNHHNIFRDAGVPVRTYRYYDPKTRGLD 180 (423)
T ss_pred HHHHcCCCCchhhcCeeEeeecccchHHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHcCCeEEEeecccCcCCccC
Confidence 9999654332233334311 2233333 33344445569999999999999999999999999999987544457899
Q ss_pred HHHHHHhhc---CCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCC--CCCCccccC-CCCC
Q 014603 173 LDAVEALAD---ENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNT--PFVPMGVFG-SIVP 246 (422)
Q Consensus 173 ~~~l~~~~~---~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~--~~~~~~~~~-~~~~ 246 (422)
++.+++.+. ++++++++++||||||.+++.+++++|+++|+++|++||+||+|..+.+++. ...++..+. ..++
T Consensus 181 ~~~l~~~l~~~~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~ 260 (423)
T PLN02397 181 FDGLLEDLKAAPDGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVEDGHE 260 (423)
T ss_pred HHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhcCCc
Confidence 998877664 4677888899999999999999999999999999999999999999988541 222222222 2246
Q ss_pred eEEEecCccccCCCCceeEEEE--eeCCCCcccchhHHH----HHHhhhh-hccCcchHHHHHHHHHHhhch--HHH---
Q 014603 247 VLTLGSISKRWIVPGWRLGWLV--TSDPNGILQDSGIVD----SIKSFLN-ISSDPATFIQGAVPQILEKTE--EEF--- 314 (422)
Q Consensus 247 ~i~i~s~sK~~~~~G~r~G~~~--~~~~~~~~~~~~~~~----~~~~~~~-~~~~~~~~~~~a~~~~l~~~~--~~~--- 314 (422)
+++++||||+|+++|+|+||++ .++ ++++. .+..... ...+++.+.|.++..+|+... +.+
T Consensus 261 vI~~~SfSK~~~~~G~RvG~~v~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~ 333 (423)
T PLN02397 261 ILVAQSYAKNMGLYGERVGALSVVCKS-------ADVAVRVKSQLKLIARPMYSNPPIHGASIVATILGDPELFSEWTKE 333 (423)
T ss_pred EEEEEECcccCCCccccceEEEEEeCC-------HHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHH
Confidence 8999999999999999999985 322 23333 3333332 234567788999988887531 233
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCC----CCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCC
Q 014603 315 FSKITDILRETADICCDRLKEIPC----ITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLK 390 (422)
Q Consensus 315 ~~~~~~~~~~~~~~l~~~L~~~~~----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~ 390 (422)
+++.++.++++++.+.+.|+++ + +. +..|++|+|+|++++ .+++.+|++++||.+.++
T Consensus 334 ~~~~~~~~~~rr~~l~~~L~~~-~~~~~~~-~~~p~gg~fl~~~l~----------~~~~~~Ll~~~~V~v~~~------ 395 (423)
T PLN02397 334 LKGMADRIISMRQKLYDALEAR-GSPGDWS-HITKQIGMFSFTGLN----------KEQVDRMTKEYHIYMTRD------ 395 (423)
T ss_pred HHHHHHHHHHHHHHHHHHHHhc-CCCCCCC-cccCCceEEEecCCC----------HHHHHHHHHhCCEEECCC------
Confidence 6778889999999999999988 4 66 447999999998773 347888999999999753
Q ss_pred CeEEEEec-cChHHHHHHHHHHHHHHH
Q 014603 391 DWLRITFA-VEPSALEDGLGRMKAFYD 416 (422)
Q Consensus 391 ~~iRis~~-~~~~~l~~~~~~l~~~~~ 416 (422)
+ ||+++ .+++++++++++|+++++
T Consensus 396 ~--Ri~~~~~~~~~i~~~~~~i~~~~~ 420 (423)
T PLN02397 396 G--RISMAGLSSKNVPYLADAIHAVVT 420 (423)
T ss_pred C--eEEEeeCCHHHHHHHHHHHHHHHh
Confidence 2 99998 899999999999999985
No 77
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=9.1e-43 Score=326.74 Aligned_cols=333 Identities=21% Similarity=0.322 Sum_probs=265.5
Q ss_pred CCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHH
Q 014603 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI 123 (422)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~ 123 (422)
+.++++|+.|.+. +++|+.+.+++.+.+.. ...|++. +.+++|+++++++ ++++++|++|+|+++++
T Consensus 19 ~~~~i~l~~~~~~----~~~p~~~~~a~~~~~~~--~~~y~~~-~~~~lr~~ia~~~------~~~~~~i~it~Ga~~~l 85 (356)
T PRK08056 19 PDQLLDFSANINP----LGMPVSLKRAIIDNLDC--AERYPDV-EYRHLHQALARHH------QVPASWILAGNGETESI 85 (356)
T ss_pred hhhEEEeccccCC----CCCCHHHHHHHHHHHHh--cccCcCc-cHHHHHHHHHHHh------CcChhhEEECCCHHHHH
Confidence 5678999999855 68889999999887654 3468764 5899999999998 57889999999999999
Q ss_pred HHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHH
Q 014603 124 EVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQ 203 (422)
Q Consensus 124 ~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~ 203 (422)
..+++++ .+|+ ++++.|+|..+...++..|.+++.+++++++++.+| +.+++.+.++++++++++|+||||.+++.+
T Consensus 86 ~~~~~~l-~~g~-viv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~-~~~~~~~~~~~k~v~l~~p~NPTG~~~~~~ 162 (356)
T PRK08056 86 FAVVSGL-KPRR-AMIVTPGFAEYRRALQQVGCEIRRYSLREADGWQLT-DAILEALTPDLDCLFLCTPNNPTGLLPERQ 162 (356)
T ss_pred HHHHHHh-CCCC-EEEeCCCcHHHHHHHHHcCCeEEEEecccccCCCcc-HHHHHhccCCCCEEEEeCCcCCCCCCCCHH
Confidence 9999887 5675 777899999999999999999999998765666666 445555667889999999999999999999
Q ss_pred HHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHH
Q 014603 204 HLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVD 283 (422)
Q Consensus 204 ~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~ 283 (422)
++++|+++|++++++||+||+|..+.+.+....+. +...+++++++||||+|+++|+|+||+++++ +++++
T Consensus 163 ~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~--~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~-------~~~~~ 233 (356)
T PRK08056 163 LLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQ--LADNPHLWVLRSLTKFYAIPGLRLGYLVNSD-------DAAVA 233 (356)
T ss_pred HHHHHHHHHHhcCCEEEEecchhccCCcchHHHHH--hccCCCEEEEEechhhccCcchhheeeecCC-------HHHHH
Confidence 99999999999999999999999877654322121 2223578999999999999999999999853 35666
Q ss_pred HHHhhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccccCC
Q 014603 284 SIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGI 363 (422)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 363 (422)
.+..... ..+++.+.|.++..+++. ..+..+.++.++++++.+.+.|++++++. + .|.+++|+|++++.
T Consensus 234 ~l~~~~~-~~~~~~~~~~~a~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~-~~~~~~~~~~~~~~------ 302 (356)
T PRK08056 234 RMRRQQM-PWSINAFAALAGEVILQD--RAYQQATWQWLAEEGARFYQALCALPLLT-V-WPGRANYLFLRCER------ 302 (356)
T ss_pred HHHHhCC-CCchhHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHhcCCCcE-E-cCCCCcEEEEEcCC------
Confidence 6665432 235667888888888864 56777888999999999999999887776 3 35568899998863
Q ss_pred CCHHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEeccChHHHHHHHHHHHHHH
Q 014603 364 NSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAVEPSALEDGLGRMKAFY 415 (422)
Q Consensus 364 ~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRis~~~~~~~l~~~~~~l~~~~ 415 (422)
++.++...++ ++||.|.+|..|.. .+++||+++. .++.+.+++.|++++
T Consensus 303 -~~~~~~~~l~-~~gI~v~~~~~f~~~~~~~iRis~~~-~~~~~~l~~~l~~~~ 353 (356)
T PRK08056 303 -PDIDLQRALL-TQRILIRSCANYPGLDSRYYRVAIRS-AAENERLLAALRNVL 353 (356)
T ss_pred -ChHHHHHHHH-HCCeEEEECCCCCCCCCCEEEEEEcC-HHHHHHHHHHHHHHH
Confidence 3456767665 57999999998843 4699999984 356667777766654
No 78
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1e-42 Score=328.20 Aligned_cols=332 Identities=22% Similarity=0.321 Sum_probs=267.2
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 122 (422)
.+.++|+|+.|.+. +.+++.+.+++.+.... ...|++..| .++|+++++++ ++++++|++|+|++++
T Consensus 34 ~~~~~i~l~~~~~~----~~~~~~~~~al~~~~~~--~~~Y~~~~g-~~lr~~ia~~~------~~~~~~i~~t~G~~~~ 100 (371)
T PRK05166 34 GVPRIAKLGSNENP----LGPSPAVRRAFADIAEL--LRLYPDPQG-RALREAIAART------GVPADRIILGNGSEDL 100 (371)
T ss_pred CCcceEEcCCCCCC----CCCCHHHHHHHHHHHHH--hhcCCCCcH-HHHHHHHHHHh------CcCHHHEEEcCCHHHH
Confidence 46689999999855 46678899998875433 457988777 59999999998 5678899999999999
Q ss_pred HHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCH
Q 014603 123 IEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTY 202 (422)
Q Consensus 123 ~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~ 202 (422)
+..++.+++++||+|+++.|+|..+...++..|.+++.++.++ ++++|++.+++.++++++++++++|+||||.+++.
T Consensus 101 l~~~~~~~~~~gd~vli~~P~y~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~ 178 (371)
T PRK05166 101 IAVICRAVLRPGDRVVTLYPSFPLHEDYPTMMGARVERVTVTP--DLGFDLDALCAAVARAPRMLMFSNPSNPVGSWLTA 178 (371)
T ss_pred HHHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCeEEEeecCC--CCCCCHHHHHHhhhcCCCEEEEeCCCCCCCCCCCH
Confidence 9999999999999999999999999999999999999988753 35789999999888888999999999999999999
Q ss_pred HHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccC-CCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhH
Q 014603 203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG-SIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGI 281 (422)
Q Consensus 203 ~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~-~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~ 281 (422)
+++++|+++|++ +++||+||+|..+.+++.....+..+. ..+++++++||||.|+++|+|+||+++++ +++
T Consensus 179 ~~~~~l~~~~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~~-------~~l 250 (371)
T PRK05166 179 DQLARVLDATPP-ETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVSD-------PEL 250 (371)
T ss_pred HHHHHHHHhCCC-CcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecCC-------HHH
Confidence 999999999975 889999999998875432222222222 23478999999999999999999988753 467
Q ss_pred HHHHHhhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCccccc
Q 014603 282 VDSIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLE 361 (422)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 361 (422)
.+.+...... .+++.++|.++..++.. ..++++.++.++++++.+.+.|+++ ++. + .|.+|+|+|++++.
T Consensus 251 ~~~~~~~~~~-~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~-g~~-~-~p~~g~fl~~~~~~---- 320 (371)
T PRK05166 251 VGLLDRVRTP-FNVNGAAQAAALAALDD--EEHLAKGVALALAERERLKKELAEM-GYR-I-APSRANFLFFDARR---- 320 (371)
T ss_pred HHHHHHhccC-CCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHC-cCe-e-CCCcCCEEEEeCCC----
Confidence 7777655432 35678888888888864 4678888899999999999999988 665 4 56678899998753
Q ss_pred CCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEeccC--hHHHHHHHHHH
Q 014603 362 GINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAVE--PSALEDGLGRM 411 (422)
Q Consensus 362 ~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~--~~~l~~~~~~l 411 (422)
++.++...+++ +||.+.||..++..+++||+++.+ .+.+.++++++
T Consensus 321 ---~~~~l~~~l~~-~gi~v~p~~~~~~~~~iRi~~~~~~~~~~l~~~l~~i 368 (371)
T PRK05166 321 ---PASAVAEALLR-QGVIVKPWKQPGFETFIRVSIGSPEENDHFVAALDKV 368 (371)
T ss_pred ---CHHHHHHHHHH-CCeEEecCCCCCCCCeEEEEcCCHHHHHHHHHHHHHH
Confidence 46677777654 699999998777789999999953 24444444443
No 79
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.1e-42 Score=317.92 Aligned_cols=333 Identities=21% Similarity=0.372 Sum_probs=279.8
Q ss_pred CCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHH
Q 014603 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI 123 (422)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~ 123 (422)
..++++|+.+. ..+++++.+.+++.+.+. ..+.|+.. ...+++++++++++ ..++++|++++|+++.+
T Consensus 21 ~~~~i~LssNe----nP~gp~~~~~~~~~~~~~--~~~rYPd~-~~~~l~~a~a~~~~-----~~~~~~V~~gnGsde~i 88 (356)
T COG0079 21 LPGIIKLSSNE----NPYGPPPKVIEAIRAALD--KLNRYPDP-DYRELRAALAEYYG-----VVDPENVLVGNGSDELI 88 (356)
T ss_pred CccceeecCCC----CCCCCCHHHHHHHHHHHH--hhccCCCC-cHHHHHHHHHHHhC-----CCCcceEEEcCChHHHH
Confidence 33689999998 336788999999988776 35688876 67999999999994 16788999999999999
Q ss_pred HHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHH
Q 014603 124 EVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQ 203 (422)
Q Consensus 124 ~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~ 203 (422)
..++++++.+||+|+++.|+|.-|...++..|.+++.++..+ +..|++.+.+.+.++++++++||||||||..++.+
T Consensus 89 ~~l~~~~~~~gd~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~~---~~~d~~~~~~~~~~~~~lv~i~nPNNPTG~~~~~~ 165 (356)
T COG0079 89 ELLVRAFVEPGDTVLIPEPTFSMYEIAAQLAGAEVVKVPLKE---FRLDLDAILAAIRDKTKLVFLCNPNNPTGTLLPRE 165 (356)
T ss_pred HHHHHHhhcCCCEEEEcCCChHHHHHHHHhcCCeEEEecccc---cccCHHHHHHhhhcCCCEEEEeCCCCCCCCCCCHH
Confidence 999999999999999999999999999999999999999754 77899999998888899999999999999999999
Q ss_pred HHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHH
Q 014603 204 HLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVD 283 (422)
Q Consensus 204 ~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~ 283 (422)
+++++++.+.+ +.+||+||+|..+. +. ..+..+...+++++++||||+||++|+|+||++++ +++++
T Consensus 166 ~l~~l~~~~~~-~~~vVvDEAY~eF~--~~--~~~~l~~~~~nlivlRTfSKa~gLAGlRlGy~ia~--------~~~i~ 232 (356)
T COG0079 166 ELRALLEALPE-GGLVVIDEAYIEFS--PE--SSLELLKYPPNLIVLRTFSKAFGLAGLRVGYAIAN--------PELIA 232 (356)
T ss_pred HHHHHHHhCCC-CcEEEEeCchhhcC--Cc--hhhhhccCCCCEEEEEecHHhhhcchhceeeccCC--------HHHHH
Confidence 99999999988 99999999999865 32 12222224456999999999999999999998875 68999
Q ss_pred HHHhhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccccCC
Q 014603 284 SIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGI 363 (422)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 363 (422)
.+.+....+ +.+.+++.++.+++++ ++++++.++++.+.++++.+.|+.++ +. ...|+.++|++++++..
T Consensus 233 ~l~~vr~p~-~v~~~a~~aa~aal~~--~~~~~~~~~~~~~~r~rl~~~l~~~~-~~-~v~pS~aNFvlv~~~~~----- 302 (356)
T COG0079 233 ALNKVRPPF-NVSSPALAAAIAALRD--ADYLEESVERIREERERLYAALKALG-LF-GVFPSQANFVLVRVPDA----- 302 (356)
T ss_pred HHHHhcCCC-CCCHHHHHHHHHHccc--HHHHHHHHHHHHHHHHHHHHHHHhCC-CC-eecCCCCcEEEEECCCc-----
Confidence 998888654 6788999999999987 48999999999999999999999985 44 23677799999998741
Q ss_pred CCHHHHHHHHHHhcCeEEecCCC-CCCCCeEEEEeccChHHHHHHHHHHHHHHHH
Q 014603 364 NSDMEFALKLAKEESVIVLPGIT-VGLKDWLRITFAVEPSALEDGLGRMKAFYDR 417 (422)
Q Consensus 364 ~~~~~~~~~l~~~~gi~v~~g~~-~~~~~~iRis~~~~~~~l~~~~~~l~~~~~~ 417 (422)
....+...| .++||.|+.... ...++++||++++.+++ ++++++|++++..
T Consensus 303 -~~~~l~~~L-~~~giivR~~~~~~~~~~~lRitvgt~een-~~ll~AL~~~~~~ 354 (356)
T COG0079 303 -EAAALAEAL-LKKGILVRDCSSVGLLPGYLRITVGTPEEN-DRLLAALREVLKG 354 (356)
T ss_pred -cHHHHHHHH-HHCCEEEEeCCCCCCCCCeEEEEeCCHHHH-HHHHHHHHHHHhc
Confidence 233555555 556999999865 22367999999988776 9999998887754
No 80
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=100.00 E-value=2.1e-42 Score=324.94 Aligned_cols=329 Identities=16% Similarity=0.267 Sum_probs=260.5
Q ss_pred CCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHH
Q 014603 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI 123 (422)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~ 123 (422)
..++|+|+.+.+. +++++.+.+++.+.+.. ...|++.. ..+||+++|+++ ++++++|++|+|+++++
T Consensus 21 ~~~~i~l~~~~n~----~~~~~~~~~a~~~~~~~--~~~Y~~~~-~~~Lr~aia~~~------~v~~~~I~it~G~~~~i 87 (360)
T PRK07392 21 PDAILDFSASINP----LGPPESVIAAIQSALSA--LRHYPDPD-YRELRLALAQHH------QLPPEWILPGNGAAELL 87 (360)
T ss_pred cccEEEeCCcCCC----CCCCHHHHHHHHHHHHH--hhcCCCcC-HHHHHHHHHHHh------CcChhhEEECCCHHHHH
Confidence 4568999998744 67889999999887654 55788754 689999999999 57899999999999999
Q ss_pred HHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCc---ccCHHHHHHhhcCCceEEEEeCCCCCccccc
Q 014603 124 EVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGW---EVDLDAVEALADENTVALVIINPGNPCGNVY 200 (422)
Q Consensus 124 ~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~ 200 (422)
..+++++. +||.|++++|+|..+...++..|.+++.+++++++++ ..+++.+++.. ++++++++++||||||.++
T Consensus 88 ~~~~~~l~-~g~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~nP~NPTG~~~ 165 (360)
T PRK07392 88 TWAGRELA-QLRAVYLITPAFGDYRRALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQL-TPNDGLLLNNPHNPTGKLW 165 (360)
T ss_pred HHHHHHhC-CCCeEEEECCCcHHHHHHHHHcCCeEEEEecccccCCcccccCHHHHHHhc-cCCCEEEEeCCCCCCCCCc
Confidence 99999875 6889999999999999999999999999998755443 24566665543 4678899999999999999
Q ss_pred CHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchh
Q 014603 201 TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSG 280 (422)
Q Consensus 201 ~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~ 280 (422)
+.+++.++ ++++++ +|+||+|..+.+++.....+..+...+++++++||||.|+++|+|+||++++ ++
T Consensus 166 ~~~~l~~l---~~~~~~-~IiDE~y~~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~~--------~~ 233 (360)
T PRK07392 166 SREAILPL---LEQFAL-VVVDEAFMDFLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIAH--------PD 233 (360)
T ss_pred CHHHHHHH---HHHCCE-EEEECchhhhccCccccchHHHhhcCCCEEEEEechhhhcCCchheeeeeCC--------HH
Confidence 97766555 557775 6669999998776532222223444568999999999999999999999986 46
Q ss_pred HHHHHHhhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccc
Q 014603 281 IVDSIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLL 360 (422)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~ 360 (422)
+++.+..... ..+++.+.|.++..+|++ ..+.++.++.++++++.+.+.|++++++. + .|.+++|+|++++.
T Consensus 234 ~~~~~~~~~~-~~~~s~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~-~~~~~~fl~~~~~~--- 305 (360)
T PRK07392 234 RLQRWQQWRD-PWPVNGLAAAAAIAALAD--RDFQQQTWAWLPPAREALFQGLASLPGLT-P-LPSAANFLLVQSQG--- 305 (360)
T ss_pred HHHHHHhhCC-CCCCCHHHHHHHHHHhcc--HHHHHHHHHHHHHHHHHHHHHHHhCCCcE-E-CCCCCCEEEEEcCC---
Confidence 7777765443 246788999999999975 45677777888999999999999888876 4 45778999988763
Q ss_pred cCCCCHHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEeccC--hHHHHHHHHHH
Q 014603 361 EGINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAVE--PSALEDGLGRM 411 (422)
Q Consensus 361 ~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRis~~~~--~~~l~~~~~~l 411 (422)
++.++...+++++||.|.||..|+. ++++||+++.+ .+++.++++++
T Consensus 306 ----~~~~l~~~ll~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~~~l~~al~~~ 356 (360)
T PRK07392 306 ----SALQLQEKLLQQHRILIRDCLSFPELGDRYFRVAVRTEAENQRLLEALAAI 356 (360)
T ss_pred ----CHHHHHHHHHhhCCEEEEeCCCCCCCCCCEEEEEeCCHHHHHHHHHHHHHH
Confidence 4667777777788999999998864 57999999964 35666666654
No 81
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.7e-42 Score=325.49 Aligned_cols=327 Identities=19% Similarity=0.294 Sum_probs=264.8
Q ss_pred CCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHH
Q 014603 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI 123 (422)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~ 123 (422)
+.++|+|+.|.+. ++++|.+.+++.+.. ....|++ .+.+++|+++++++ ++++++|++|+|+++++
T Consensus 51 ~~~~i~l~~n~~p----~~~~~~v~~a~~~~~---~~~~Yp~-~~~~~lr~~ia~~~------~~~~~~I~~t~Ga~~~i 116 (380)
T PLN03026 51 PEDIVKLDANENP----YGPPPEVLEALGNMK---FPYVYPD-PESRRLRAALAEDS------GLESENILVGCGADELI 116 (380)
T ss_pred ccceEEccCCCCC----CCCCHHHHHHHHhhH---hhccCCC-CCHHHHHHHHHHHh------CcChhhEEEcCCHHHHH
Confidence 5688999999854 577788888886531 2345765 46799999999998 57889999999999999
Q ss_pred HHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhh-cCCceEEEEeCCCCCcccccCH
Q 014603 124 EVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALA-DENTVALVIINPGNPCGNVYTY 202 (422)
Q Consensus 124 ~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~-~~~~~~i~i~~p~nptG~~~~~ 202 (422)
..++.+++++||+|++++|+|..|...++..|.+++.++.+ +++.+|++.+++.+ .++++++++++|+||||.+++.
T Consensus 117 ~~~~~~~~~~gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~~~~~~~~v~l~~P~NPTG~~~~~ 194 (380)
T PLN03026 117 DLLMRCVLDPGDKIIDCPPTFGMYVFDAAVNGAEVIKVPRT--PDFSLDVPRIVEAVETHKPKLLFLTSPNNPDGSIISD 194 (380)
T ss_pred HHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeecC--CCCCcCHHHHHHHHhccCCcEEEEeCCCCCCCCCCCH
Confidence 99999999999999999999999988889999999988874 35678999999988 6789999999999999999999
Q ss_pred HHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHH
Q 014603 203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIV 282 (422)
Q Consensus 203 ~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 282 (422)
+++++|++.+ ++||+||+|..+.+.+. ....+...+++++++||||.|+++|+|+||++++ ++++
T Consensus 195 ~~l~~l~~~~----~~vi~DeaY~~~~~~~~---~~~~~~~~~~viv~~SfSK~~glaGlRiGy~~~~--------~~~i 259 (380)
T PLN03026 195 DDLLKILELP----ILVVLDEAYIEFSTQES---RMKWVKKYDNLIVLRTFSKRAGLAGLRVGYGAFP--------LSII 259 (380)
T ss_pred HHHHHHHhcC----CEEEEECcchhhcCCcc---hHHHHHhCCCEEEEecchHhhcCccccceeeecC--------HHHH
Confidence 9999888753 89999999998765432 1222334467999999999999999999999986 5678
Q ss_pred HHHHhhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccccC
Q 014603 283 DSIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEG 362 (422)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 362 (422)
+.+...... .+.+.++|.++.++|+. ..++++.++.++++++.+.+.|++++++. + .|.+++|+|++++..
T Consensus 260 ~~l~~~~~~-~~~~~~~q~aa~~aL~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~-~p~~~~f~~~~~~~~---- 330 (380)
T PLN03026 260 EYLWRAKQP-YNVSVAAEVAACAALSN--PKYLEDVKNALVEERERLFGLLKEVPFLE-P-YPSDANFILCRVTSG---- 330 (380)
T ss_pred HHHHHhcCC-CCCCHHHHHHHHHHhhC--HHHHHHHHHHHHHHHHHHHHHHHHCCCCe-E-CCCCCeEEEEECCCC----
Confidence 887766543 35678889999999975 46788889999999999999999985454 3 678899999988632
Q ss_pred CCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEeccChHHHHHHHHHHHH
Q 014603 363 INSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALEDGLGRMKA 413 (422)
Q Consensus 363 ~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~l~~~~~~l~~ 413 (422)
.++.++...++ ++||.|+++..++..+++|||+++ .++.+++++.|++
T Consensus 331 -~~~~~~~~~l~-~~gI~v~~~~~~~~~~~lRis~~~-~~~~~~l~~al~~ 378 (380)
T PLN03026 331 -RDAKKLKEDLA-KMGVMVRHYNSKELKGYIRVSVGK-PEHTDALMEALKQ 378 (380)
T ss_pred -CCHHHHHHHHH-HCCeEEEECCCCCCCCEEEEecCC-HHHHHHHHHHHHH
Confidence 14667777765 679999998766567899999995 3466666666554
No 82
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=6.1e-42 Score=323.33 Aligned_cols=336 Identities=20% Similarity=0.304 Sum_probs=275.4
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 122 (422)
++.++++|+.+.+. +.+++.+.+++.+.... ...|++.. ..++|+++++++ ++++++|++|+|++++
T Consensus 30 ~~~~~i~l~~~~~~----~~~~~~~~~a~~~~~~~--~~~y~~~~-~~~lr~~ia~~~------~~~~~~i~~t~G~~~~ 96 (367)
T PRK02731 30 GIADIIKLASNENP----LGPSPKAIEAIRAAADE--LHRYPDGS-GFELKAALAEKF------GVDPERIILGNGSDEI 96 (367)
T ss_pred CCCceEEecCCCCC----CCCCHHHHHHHHHHHHh--hcCCCCCc-HHHHHHHHHHHh------CcCHHHEEEcCCHHHH
Confidence 46789999999855 45678899999887753 45787654 479999999998 5678899999999999
Q ss_pred HHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCH
Q 014603 123 IEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTY 202 (422)
Q Consensus 123 ~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~ 202 (422)
+..++.+++++||+|++++|+|..+...+...|.+++.++. +++.+|++.+++.++++++++++++|+||||.+++.
T Consensus 97 l~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~---~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~ 173 (367)
T PRK02731 97 LELLARAYLGPGDEVIYSEHGFAVYPIAAQAVGAKPVEVPA---KDYGHDLDAMLAAVTPRTRLVFIANPNNPTGTYLPA 173 (367)
T ss_pred HHHHHHHhcCCCCEEEEecCCHHHHHHHHHHcCCeEEEecc---cCCCCCHHHHHHHhCCCCcEEEEeCCCCCCCcCCCH
Confidence 99999999999999999999999888888889999988876 346789999999988889999999999999999999
Q ss_pred HHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHH
Q 014603 203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIV 282 (422)
Q Consensus 203 ~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 282 (422)
+++.++++.|+ +|+++|+||+|..+.+.+.....+..++..+++++++|+||.|+++|+|+||++++ ++++
T Consensus 174 ~~l~~l~~~~~-~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~--------~~~~ 244 (367)
T PRK02731 174 EEVERFLAGVP-PDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNVVVTRTFSKAYGLAGLRVGYGIAP--------PEII 244 (367)
T ss_pred HHHHHHHHhCC-CCcEEEEECcHHHhccCcCcccHHHHHhhcCCEEEEeeehHhhcCcccceeeeeCC--------HHHH
Confidence 99999999875 59999999999887765433333333334467899999999999999999999986 4677
Q ss_pred HHHHhhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccccC
Q 014603 283 DSIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEG 362 (422)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 362 (422)
+++...... ...+.++|.++..+|+. ..++++.++.++++++.+.+.|+++ ++. + .|..|.|+|+.++..
T Consensus 245 ~~l~~~~~~-~~~~~~~~~~a~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~-~~~~g~~~~i~~~~~---- 314 (367)
T PRK02731 245 DALNRVRQP-FNVNSLALAAAVAALDD--DAFVEKSRALNAEGMAWLTEFLAEL-GLE-Y-IPSVGNFILVDFDDG---- 314 (367)
T ss_pred HHHHHccCC-CCCCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCc-c-CCCCceEEEEECCCC----
Confidence 777765533 35567889999888875 5678888899999999999999998 776 3 355688999988532
Q ss_pred CCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEeccChHHHHHHHHHHHHHHH
Q 014603 363 INSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALEDGLGRMKAFYD 416 (422)
Q Consensus 363 ~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~l~~~~~~l~~~~~ 416 (422)
.++.++...+ .++||.+.++..|+.++++||++++ .++++++++.|+++++
T Consensus 315 -~~~~~~~~~L-~~~gI~v~~~~~~~~~~~iRis~~~-~~e~~~l~~aL~~~~~ 365 (367)
T PRK02731 315 -KDAAEAYQAL-LKRGVIVRPVAGYGLPNALRITIGT-EEENRRFLAALKEFLA 365 (367)
T ss_pred -CCHHHHHHHH-HHCCEEEEeCCCCCCCCeEEEecCC-HHHHHHHHHHHHHHHh
Confidence 2566777766 4679999999888767899999984 5788999999988764
No 83
>PRK08637 hypothetical protein; Provisional
Probab=100.00 E-value=1.8e-41 Score=321.46 Aligned_cols=357 Identities=17% Similarity=0.208 Sum_probs=264.7
Q ss_pred CceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCC---CCCEEEecCHHHH
Q 014603 46 PLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLS---PDDVYLTLGCTQA 122 (422)
Q Consensus 46 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~---~~~i~~~~g~~~a 122 (422)
..+|.++|..+........+.+.+++.+. .......|++..|.+++|+++++++.+..+ ... .++|++|+|++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~-~~~~~~~~~I~it~G~~~a 81 (388)
T PRK08637 4 TKYNATIGMATEKGGPMYLSSLQDLLNDL-TPDEIFPYAPPQGIPELRDLWQEKMLRENP-SLSGKKMSLPIVTNALTHG 81 (388)
T ss_pred cceecceeeEecCCCcchHHHHHHHHHhh-ccccccCCCCCCCCHHHHHHHHHHHhccCc-cccccccceeeEccchHHH
Confidence 44667777654322222334444443332 223456899999999999999999876543 222 3678999999999
Q ss_pred HHHHHHHhcCCCCEEEecCCCccchHHHHh-hCCCeEEEeeccCCCCcccCHHHHHHhhc----CCceEEEEeCCCCCcc
Q 014603 123 IEVILTVLARPGANILLPRPGFPYYEARAT-HSHLEVRHFDLLPAKGWEVDLDAVEALAD----ENTVALVIINPGNPCG 197 (422)
Q Consensus 123 ~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~d~~~l~~~~~----~~~~~i~i~~p~nptG 197 (422)
+..++.+++++||+|++++|+|+.+...+. ..|.+++.+++.. +++++|++.+++.++ +.+.++++++||||||
T Consensus 82 l~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~g~~vv~v~~~~-~~~~~d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG 160 (388)
T PRK08637 82 LSLVADLFVDQGDTVLLPDHNWGNYKLTFNTRRGAEIVTYPIFD-EDGGFDTDALKEALQAAYNKGKVIVILNFPNNPTG 160 (388)
T ss_pred HHHHHHHhcCCCCEEEEcCCCCccHHHHHHHhcCCEEEEecccC-CCCcCCHHHHHHHHHhhccCCCEEEEEeCCCCCCC
Confidence 999999999999999999999999988654 6799999998742 234689999988775 4556677889999999
Q ss_pred cccCHHHHHHHHHHHHH-----cCcEEEEcccccccccCCCCCCCc-ccc-CCCCCe--EEEecCccccCCCCceeEEEE
Q 014603 198 NVYTYQHLQKIAETAKK-----LGIMVIADEVYDHLAFGNTPFVPM-GVF-GSIVPV--LTLGSISKRWIVPGWRLGWLV 268 (422)
Q Consensus 198 ~~~~~~~l~~i~~~~~~-----~~~~li~D~~~~~~~~~~~~~~~~-~~~-~~~~~~--i~i~s~sK~~~~~G~r~G~~~ 268 (422)
.+++.+++++|+++|++ ++++||+||+|..+.|++....++ ..+ +..+++ ++++|+||.|++||+|+||++
T Consensus 161 ~~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~~ 240 (388)
T PRK08637 161 YTPTEKEATAIVEAIKELADAGTKVVAVVDDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFIT 240 (388)
T ss_pred CCCCHHHHHHHHHHHHHHHhcCCcEEEEecccchhcccCCccchhhHHHhhcccccceEEEeccccccCCCcccceEEEE
Confidence 99999999999999885 899999999999988876543332 222 233464 445699999999999999999
Q ss_pred eeCCCCcccchhHHHHHHhhh----h-hccCcchHHHHHHHHHHhhch-HHHHHHHHHHHHHHHHHHHHHhhcC---CCC
Q 014603 269 TSDPNGILQDSGIVDSIKSFL----N-ISSDPATFIQGAVPQILEKTE-EEFFSKITDILRETADICCDRLKEI---PCI 339 (422)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~---~~~ 339 (422)
.+.+.. ..+++.+.+.... . ...+++.+.|.++..+|++.. ..++.+.+..++++++.+.+.|+.. +++
T Consensus 241 ~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~ 318 (388)
T PRK08637 241 FGTKAG--SSQTVKEALEKKVKGLIRSNISNGPHPSQSAVLRALNSPEFDKEKQEKFQILKERYEKTKEVLYDGKYDDAW 318 (388)
T ss_pred EccccC--CcHHHHHHHHHHHHHHhhcccCCCCcHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCc
Confidence 753100 0145666665421 1 223678899999999997532 3445556667888888888888764 245
Q ss_pred CCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec-cChHHHHHHHHHHHHHHHHh
Q 014603 340 TCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA-VEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 340 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~-~~~~~l~~~~~~l~~~~~~~ 418 (422)
. +..|.+|+|+|++++.. ++.+++..+++++||.+.+. ..+++||+++ .+.+++++++++|.++++++
T Consensus 319 ~-~~~~~~g~~~~~~l~~~------~~~~l~~~l~~~~gv~~~~~----~~~~iRi~~~~~~~~~i~~~~~~l~~~~~~~ 387 (388)
T PRK08637 319 Q-AYPFNSGYFMCLKLKGV------DAEELRVHLLEKYGIGTIAL----NETDLRIAFSCVEEEDIPELFDSIYKAIKDL 387 (388)
T ss_pred c-cccccceEEEEecCChH------HHHHHHHHHhhhcceEEEec----cCCceEEEeecCCHHHHHHHHHHHHHHHHhc
Confidence 5 44778899999998631 45677777767789988753 2578999998 68899999999999999765
No 84
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=4.5e-42 Score=322.61 Aligned_cols=327 Identities=21% Similarity=0.321 Sum_probs=267.1
Q ss_pred CCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCC-CCEEEecCHHHH
Q 014603 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSP-DDVYLTLGCTQA 122 (422)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~-~~i~~~~g~~~a 122 (422)
+.++|+|+.|.+. +++++.+.+++.+.+.......|++ .+.+++|++++++++ +.+ ++|++|+|++++
T Consensus 25 ~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~-~~~~~lr~~ia~~~~------~~~~~~I~~t~G~~~~ 93 (356)
T PRK04870 25 ATGMVKLDAMENP----YRLPAELRAELGERLAEVALNRYPD-PRAAALKAALRAAMG------VPAGADVLLGNGSDEL 93 (356)
T ss_pred CCCceeCcCCCCC----CCCCHHHHHHHHHHhhccccccCCC-CCHHHHHHHHHHHhC------cCCCCcEEEcCCHHHH
Confidence 4679999999854 7889999999999886544567887 577999999999994 333 589999999999
Q ss_pred HHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhc-CCceEEEEeCCCCCcccccC
Q 014603 123 IEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALAD-ENTVALVIINPGNPCGNVYT 201 (422)
Q Consensus 123 ~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~i~i~~p~nptG~~~~ 201 (422)
+..++++++++||+|++++|+|..+...++..|.+++.++++ +++.+|++.+++.+. .+++++++++|+||||.+++
T Consensus 94 i~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~--~~~~~d~~~l~~~~~~~~~~~v~l~~p~NPtG~~~~ 171 (356)
T PRK04870 94 IQLLALACAKPGATVLAPEPGFVMYRMSAKLAGLEFVGVPLT--ADFTLDLPAMLAAIAEHRPALVFLAYPNNPTGNLFD 171 (356)
T ss_pred HHHHHHHhcCCCCEEEECCCCHHHHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhcCCCCEEEEcCCCCCCCCCCC
Confidence 999999999999999999999999999999999999999875 346799999999885 47899999999999999999
Q ss_pred HHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhH
Q 014603 202 YQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGI 281 (422)
Q Consensus 202 ~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~ 281 (422)
.+++++|+++| ++++|+||+|..+.+.. . ...+...+++++++|||| ++++|+|+||++++ +++
T Consensus 172 ~~~~~~i~~~~---~~~ii~De~y~~~~~~~--~--~~~~~~~~~vi~~~S~SK-~~~~GlRiG~~i~~--------~~~ 235 (356)
T PRK04870 172 DADVERIIEAA---PGLVVVDEAYQPFAGDS--W--LPRLARFPNLLVMRTVSK-LGLAGLRLGYLAGH--------PAW 235 (356)
T ss_pred HHHHHHHHHHC---CCEEEEECCchhhcCcc--h--HHHHhhCCCEEEEecchh-hhhHHHhhhhhhCC--------HHH
Confidence 99999999988 77899999998765321 1 112233457999999999 69999999999986 467
Q ss_pred HHHHHhhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCccccc
Q 014603 282 VDSIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLE 361 (422)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 361 (422)
++++...... .+.+.+.|.++..++++ ..++++.+++++++++.+.+.|++++++. + .|.+|+|+|++++
T Consensus 236 i~~~~~~~~~-~~~~~~~q~~a~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~-~~~~~~~~~~~~~----- 305 (356)
T PRK04870 236 IAELDKVRPP-YNVNVLTQATALFALEH--VDVLDAQAAQLRAERTRLAAALAALPGVT-V-FPSAANFILVRVP----- 305 (356)
T ss_pred HHHHHHccCC-CcCCHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHHHhCCCcE-E-CCCCCeEEEEECC-----
Confidence 7777765532 35677888888888864 34578888899999999999999988876 4 4667889999886
Q ss_pred CCCCHHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEeccChHHHHHHHHHHHHH
Q 014603 362 GINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAVEPSALEDGLGRMKAF 414 (422)
Q Consensus 362 ~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRis~~~~~~~l~~~~~~l~~~ 414 (422)
+..++.. +++++||.|.++..|+. .+++||++++ .++.+++++.|.++
T Consensus 306 ---~~~~~~~-~l~~~gI~v~~~~~f~~~~~~~iRis~~~-~~~~~~l~~al~~~ 355 (356)
T PRK04870 306 ---DAAAVFD-GLKTRGVLVKNLSGMHPLLANCLRVTVGT-PEENAQFLAALKAA 355 (356)
T ss_pred ---CHHHHHH-HHHHCCEEEEECCCCCCCCCCeEEEeCCC-HHHHHHHHHHHHHh
Confidence 2445554 45778999999988753 6799999994 56777888777664
No 85
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=5.8e-42 Score=323.13 Aligned_cols=335 Identities=19% Similarity=0.316 Sum_probs=268.3
Q ss_pred CceeecCCCCCCCCCCCCcHHHHHHHHHHhhC--CCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHH
Q 014603 46 PLIPLGHGDPSAFPSFRTASVAVDAIVHSVRS--ARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI 123 (422)
Q Consensus 46 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~--~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~ 123 (422)
..|+|+.|.+. +++++.+.+++.+.+.. .....|++ .+.+++|+++++++++.+|.++++++|++|+|+++++
T Consensus 27 ~~i~l~~~~~~----~~~~~~~~~al~~~l~~~~~~~~~Y~~-~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~l 101 (368)
T PRK03317 27 VPVRLNTNENP----YPPSPALVADIAEAVAEAAAGLNRYPD-RDAVALRADLAAYLTAQTGVGLTVENVWAANGSNEIL 101 (368)
T ss_pred ceeEecCCCCC----CCCCHHHHHHHHHHHhhhhhhhccCCC-CchHHHHHHHHHHhhhhccCCCChhhEEECCCHHHHH
Confidence 56999999855 68899999999988753 23457865 5789999999999999888889999999999999999
Q ss_pred HHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhc-CCceEEEEeCCCCCcccccCH
Q 014603 124 EVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALAD-ENTVALVIINPGNPCGNVYTY 202 (422)
Q Consensus 124 ~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~i~i~~p~nptG~~~~~ 202 (422)
..++++++++||.|+++.|+|..+...++..|.+++.++. .+++++|++.+++.+. .+++++++++|+||||.+++.
T Consensus 102 ~~~~~~~~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~--~~~~~~d~~~l~~~~~~~~~~~i~l~~p~NPtG~~~~~ 179 (368)
T PRK03317 102 QQLLQAFGGPGRTALGFVPSYSMHPIIARGTHTEWVEGPR--AADFTLDVDAAVAAIAEHRPDVVFLTSPNNPTGTALPL 179 (368)
T ss_pred HHHHHHhcCCCCEEEEeCCChHHHHHHHHhcCCeeEEccc--CCCCCCCHHHHHHHHhccCCCEEEEeCCCCCCCCCCCH
Confidence 9999999999999999999999999999888888777765 3457899999999876 467889999999999999999
Q ss_pred HHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHH
Q 014603 203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIV 282 (422)
Q Consensus 203 ~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 282 (422)
+++++|+++| ++++|+||+|..+.+.+.. ......+..+++++++||||.|+++|+|+||++++ ++++
T Consensus 180 ~~l~~l~~~~---~~~lI~DE~y~~~~~~~~~-~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~~--------~~~~ 247 (368)
T PRK03317 180 DDVEAILDAA---PGIVVVDEAYAEFRRSGTP-SALTLLPEYPRLVVSRTMSKAFAFAGGRLGYLAAA--------PAVV 247 (368)
T ss_pred HHHHHHHHHC---CceEEEeCCchhhcccCCc-CHHHHHHhCCCEEEEEechhhhccchhhhhhhhCC--------HHHH
Confidence 9999888876 6999999999987765532 12222233457899999999999999999999986 5688
Q ss_pred HHHHhhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccccC
Q 014603 283 DSIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEG 362 (422)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 362 (422)
+.+..... ....+++.|.++.++|+.. ..+.+..++++++++.+.+.|++. ++. +..+.+++++|..++
T Consensus 248 ~~l~~~~~-~~~~s~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~------ 316 (368)
T PRK03317 248 DALRLVRL-PYHLSAVTQAAARAALRHA--DELLASVAALRAERDRVVAWLREL-GLR-VAPSDANFVLFGRFA------ 316 (368)
T ss_pred HHHHhcCC-CCCCCHHHHHHHHHHhhCH--HHHHHHHHHHHHHHHHHHHHHHHC-CCE-eCCCCCcEEEEeccC------
Confidence 88776553 3467789999999999752 334455567888899999999987 666 446676776665553
Q ss_pred CCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEeccChHHHHHHHHHHHHHHHH
Q 014603 363 INSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALEDGLGRMKAFYDR 417 (422)
Q Consensus 363 ~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~l~~~~~~l~~~~~~ 417 (422)
+..++...+ .++||.+.+. +.++++||++++ .++++++++.|++++.-
T Consensus 317 --~~~~~~~~l-~~~Gv~v~~~---~~~~~iRi~~~~-~~~~~~~~~~l~~~~~~ 364 (368)
T PRK03317 317 --DRHAVWQGL-LDRGVLIRDV---GIPGWLRVTIGT-PEENDAFLAALAEVLAT 364 (368)
T ss_pred --CHHHHHHHH-HHCCEEEEeC---CCCCeEEEecCC-HHHHHHHHHHHHHHHHH
Confidence 355565655 5679999874 346899999974 56889999998887643
No 86
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.3e-41 Score=319.52 Aligned_cols=328 Identities=19% Similarity=0.331 Sum_probs=264.5
Q ss_pred CCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHH
Q 014603 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI 123 (422)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~ 123 (422)
..++|+|+.|.+. +++++.+.+++.+.+... ...|++. +.+++|+++|+++ ++++++|++|+|+++++
T Consensus 23 ~~~~i~l~~~~~~----~~~~~~~~~a~~~~~~~~-~~~y~~~-~~~~lr~aia~~~------~~~~~~I~it~G~~~al 90 (353)
T PRK05387 23 LAKLIKLNTNENP----YPPSPKVLEAIRAALGDD-LRLYPDP-NADALRQAIAAYY------GLDPEQVFVGNGSDEVL 90 (353)
T ss_pred ccceeeccCCCCC----CCCCHHHHHHHHHHhhhh-hhcCCCC-cHHHHHHHHHHHh------CCCHHHEEEcCCHHHHH
Confidence 4578999999965 577889999998876642 4578654 5699999999998 57889999999999999
Q ss_pred HHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHH
Q 014603 124 EVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQ 203 (422)
Q Consensus 124 ~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~ 203 (422)
..++++++++||+|++++|+|..+...++..|.+++.++.+ +++.+|++.+++ .++++++++|+||||.++|.+
T Consensus 91 ~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~----~~~~v~~~~P~NPtG~~~~~~ 164 (353)
T PRK05387 91 AHAFLAFFNHDRPLLFPDITYSFYPVYAGLYGIPYEEIPLD--DDFSIDVEDYLR----PNGGIIFPNPNAPTGIALPLA 164 (353)
T ss_pred HHHHHHhcCCCCEEEEeCCCHHHHHHHHHHcCCEEEEeecC--CCCCCCHHHHHh----cCCEEEEeCCCCCCCCCCCHH
Confidence 99999999999999999999999999899999999998874 346789998864 356789999999999999999
Q ss_pred HHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHH
Q 014603 204 HLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVD 283 (422)
Q Consensus 204 ~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~ 283 (422)
++++|+++++ ++++|+||+|..+. +....++ ....+++++++||||.|+++|+|+||++++ +++++
T Consensus 165 ~~~~l~~~~~--~~~livDe~y~~~~--~~~~~~~--~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~--------~~~~~ 230 (353)
T PRK05387 165 EIERILAANP--DSVVVIDEAYVDFG--GESAIPL--IDRYPNLLVVQTFSKSRSLAGLRVGFAIGH--------PELIE 230 (353)
T ss_pred HHHHHHHhCC--CcEEEEeCcccccC--CcchHHH--HhhCCCEEEEEehhHhhcchhhhceeeecC--------HHHHH
Confidence 9999998654 89999999997643 3222222 233467899999999999999999999985 46778
Q ss_pred HHHhhhhh--ccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCccccc
Q 014603 284 SIKSFLNI--SSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLE 361 (422)
Q Consensus 284 ~~~~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 361 (422)
++...... ..+.+.+.|.++..++.+ ..++++.++++.++++.+.+.|+++ ++. + .|.+++|+|+.++..
T Consensus 231 ~l~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~-~~~~~~~~~~~~~~~--- 302 (353)
T PRK05387 231 ALNRVKNSFNSYPLDRLAQAGAIAAIED--EAYFEETRAKVIATRERLVEELEAL-GFE-V-LPSKANFVFARHPSH--- 302 (353)
T ss_pred HHHHhhccCCCCCcCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCe-E-CCCcCcEEEEECCCC---
Confidence 77766532 235678899999888864 4667888889999999999999988 665 3 466788999887631
Q ss_pred CCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEeccChHHHHHHHHHHHHHHH
Q 014603 362 GINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALEDGLGRMKAFYD 416 (422)
Q Consensus 362 ~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~l~~~~~~l~~~~~ 416 (422)
++.++...+ .++||.+.+.......+++|++++ +.+++++++++|++++.
T Consensus 303 ---~~~~~~~~l-~~~gi~v~~~~~~~~~~~iRis~~-~~~~~~~~~~~L~~~~~ 352 (353)
T PRK05387 303 ---DAAELAAKL-RERGIIVRHFNKPRIDQFLRITIG-TDEEMEALVDALKEILA 352 (353)
T ss_pred ---CHHHHHHHH-HHCCEEEEECCCCCCCCeEEEEeC-CHHHHHHHHHHHHHHhh
Confidence 566777766 567999976433334679999998 45899999999988764
No 87
>PRK09105 putative aminotransferase; Provisional
Probab=100.00 E-value=2.6e-41 Score=317.41 Aligned_cols=324 Identities=17% Similarity=0.187 Sum_probs=260.3
Q ss_pred CCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHH
Q 014603 45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIE 124 (422)
Q Consensus 45 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~ 124 (422)
+++++|+.|.+. ++++|.+.+++.+.+.. ...|++.. .+++|++|++++ ++++++|++|+|+++++.
T Consensus 43 ~~~i~l~~~~~~----~~~~~~~~~a~~~~~~~--~~~Y~~~~-~~~Lr~aia~~~------~v~~e~I~it~Gs~~ai~ 109 (370)
T PRK09105 43 EGAVFLNANECP----LGPSPAARDAAARSAAL--SGRYDLEL-EDDLRTLFAAQE------GLPADHVMAYAGSSEPLN 109 (370)
T ss_pred CCcEEecCCCCC----CCCCHHHHHHHHHHHHH--hcCCCCch-HHHHHHHHHHHh------CcChhhEEEcCChHHHHH
Confidence 457999999854 68889999999887653 24687654 889999999988 578999999999999999
Q ss_pred HHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHH
Q 014603 125 VILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQH 204 (422)
Q Consensus 125 ~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~ 204 (422)
.++.+++++||+|++++|+|..+...++..|.+++.++.++ ++.+|++.+++. .++++++++++|+||||.+++.++
T Consensus 110 ~~~~~l~~~gd~Vli~~P~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~-~~~~~~v~l~nP~NPTG~~~~~~~ 186 (370)
T PRK09105 110 YAVLAFTSPTAGLVTADPTYEAGWRAADAQGAPVAKVPLRA--DGAHDVKAMLAA-DPNAGLIYICNPNNPTGTVTPRAD 186 (370)
T ss_pred HHHHHHcCCCCEEEEeCCChHHHHHHHHHcCCeEEEecCCC--CCCCCHHHHHhc-CCCCCEEEEeCCCCCCCcCcCHHH
Confidence 99999999999999999999999999999999999998753 467899999876 457889999999999999999999
Q ss_pred HHHHHHHHHHcCcEEEEcccccccccCCCCCCCcccc-CCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHH
Q 014603 205 LQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF-GSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVD 283 (422)
Q Consensus 205 l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~-~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~ 283 (422)
++++++.|+ +++++|+||+|..+.. . . +...+ +..+++++++||||.||++|+|+||++++ +++++
T Consensus 187 l~~l~~~~~-~~~~lIvDEaY~~f~~--~-~-s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~--------~~~i~ 253 (370)
T PRK09105 187 IEWLLANKP-AGSVLLVDEAYIHFSD--A-P-SVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAAR--------PDLLA 253 (370)
T ss_pred HHHHHHhCC-CCcEEEEECchHHhcc--C-c-chHHHHhhCCCEEEEecccHhhcCCccceeeeecC--------HHHHH
Confidence 999999764 5999999999976542 1 1 22222 33467999999999999999999999986 46777
Q ss_pred HHHhhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccccCC
Q 014603 284 SIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGI 363 (422)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 363 (422)
.+... . ...++.+.|.++.++|.+ ..++++.+++++++++.+.+.|+++ ++. +..|+++ |++++++.
T Consensus 254 ~l~~~-~-~~~~~~~~~~aa~~~L~~--~~~~~~~~~~~~~~r~~l~~~L~~~-g~~-~~~~~~~-f~~~~~~~------ 320 (370)
T PRK09105 254 KLARF-G-HNPLPVPAAAAGLASLRD--PKLVPQRRAENAAVREDTIAWLKKK-GYK-CTPSQAN-CFMVDVKR------ 320 (370)
T ss_pred HHHhc-C-CCCcCHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCC-cCCCCCc-EEEEeCCC------
Confidence 77665 2 235677788888888875 5788888899999999999999987 776 4355555 55676642
Q ss_pred CCHHHHHHHHHHhcCeEEecCCCCC-CCCeEEEEeccChHHHHHHHHHHHHHH
Q 014603 364 NSDMEFALKLAKEESVIVLPGITVG-LKDWLRITFAVEPSALEDGLGRMKAFY 415 (422)
Q Consensus 364 ~~~~~~~~~l~~~~gi~v~~g~~~~-~~~~iRis~~~~~~~l~~~~~~l~~~~ 415 (422)
+..++...+++ +||.+.. .|. .++++||++++ +++++++++.|++++
T Consensus 321 -~~~~l~~~L~~-~gI~v~~--~~~~~~~~~Ris~~~-~~~~~~l~~al~~~~ 368 (370)
T PRK09105 321 -PAKAVADAMAK-QGVFIGR--SWPIWPNWVRVTVGS-EEEMAAFRSAFAKVM 368 (370)
T ss_pred -CHHHHHHHHHH-CCcEEec--CCCCCCCeEEEEcCC-HHHHHHHHHHHHHHh
Confidence 46777777765 4999833 343 36899999985 567888888877654
No 88
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=5e-41 Score=316.07 Aligned_cols=335 Identities=17% Similarity=0.245 Sum_probs=271.1
Q ss_pred CCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHH
Q 014603 45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIE 124 (422)
Q Consensus 45 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~ 124 (422)
...++|+.|++. +++++.+.+++.+.... ...|++. +.+++|++||+++ ++++++|++|+|+++++.
T Consensus 32 ~~~~~l~~~~~~----~~~~~~~~~a~~~~~~~--~~~Y~~~-~~~~Lr~~ia~~~------~~~~~~I~it~G~~~~l~ 98 (369)
T PRK08153 32 PFRARIGANESG----FGPSPSVIAAMREAAAE--IWKYGDP-ENHDLRHALAAHH------GVAPENIMVGEGIDGLLG 98 (369)
T ss_pred cceeEecCCCCC----CCCCHHHHHHHHHHHHH--hhcCCCC-ccHHHHHHHHHHh------CCCHHHEEEcCCHHHHHH
Confidence 345799999854 78889999999887643 3468775 4789999999998 578899999999999999
Q ss_pred HHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhh-cCCceEEEEeCCCCCcccccCHH
Q 014603 125 VILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALA-DENTVALVIINPGNPCGNVYTYQ 203 (422)
Q Consensus 125 ~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~-~~~~~~i~i~~p~nptG~~~~~~ 203 (422)
.++.+++++||.|+++.|+|+.+...+...|.+++.++.+. ...|++.+++.+ +.+++++++++|+||||.++|.+
T Consensus 99 ~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~vp~~~---~~~~~~~l~~~~~~~~~~~i~l~~P~NPtG~~~~~~ 175 (369)
T PRK08153 99 LIVRLYVEPGDPVVTSLGAYPTFNYHVAGFGGRLVTVPYRD---DREDLDALLDAARRENAPLVYLANPDNPMGSWHPAA 175 (369)
T ss_pred HHHHHhcCCCCEEEECCCcchHHHHHHHHcCCeEEEeeCCC---CCCCHHHHHHHhcccCCcEEEEeCCCCCCCCCCCHH
Confidence 99999999999999999999999888888999999888743 247888887765 45788999999999999999999
Q ss_pred HHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHH
Q 014603 204 HLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVD 283 (422)
Q Consensus 204 ~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~ 283 (422)
++.+|+++|++ |++||+||+|..+.+++. ..++.. ..+++++++||||.|+++|+|+||++++ +++++
T Consensus 176 ~l~~l~~~~~~-~~~lI~DE~y~~~~~~~~-~~~~~~--~~~~~i~~~SfSK~~g~~GlRiG~~v~~--------~~~~~ 243 (369)
T PRK08153 176 DIVAFIEALPE-TTLLVLDEAYCETAPAGA-APPIDT--DDPNVIRMRTFSKAYGLAGARVGYAIGA--------PGTIK 243 (369)
T ss_pred HHHHHHHhCCC-CcEEEEeCchhhhcCccc-chhhhh--cCCCEEEEecchHhccCcchheeeeecC--------HHHHH
Confidence 99999999874 999999999998876542 222222 2357999999999999999999999986 46777
Q ss_pred HHHhhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccccCC
Q 014603 284 SIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGI 363 (422)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 363 (422)
.+...... .+.+.+.|.++.++|++ ..++++.++.++++++.+.+.|++. ++. . .|.+++|+|+.++.. .
T Consensus 244 ~l~~~~~~-~~~s~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~~~~~L~~~-g~~-~-~p~~~~f~~~~~~~~----~ 313 (369)
T PRK08153 244 AFDKVRNH-FGMNRIAQAAALAALKD--QAYLAEVVGKIAAARDRIAAIARAN-GLT-P-LPSATNFVAIDCGRD----G 313 (369)
T ss_pred HHHHhhcC-CCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCc-c-CCCcCcEEEEECCCC----c
Confidence 77765543 46788999999999974 5778888999999999999999987 665 3 477889999887521 0
Q ss_pred CCHHHHHHHHHHhcCeEEe-cCCCCCCCCeEEEEeccChHHHHHHHHHHHHHHHHhcc
Q 014603 364 NSDMEFALKLAKEESVIVL-PGITVGLKDWLRITFAVEPSALEDGLGRMKAFYDRHAK 420 (422)
Q Consensus 364 ~~~~~~~~~l~~~~gi~v~-~g~~~~~~~~iRis~~~~~~~l~~~~~~l~~~~~~~~~ 420 (422)
....++...+. ++||.+. |+.. ..++++||+++ ++++++.+++.|++++...++
T Consensus 314 ~~a~~l~~~l~-~~Gi~v~~p~~~-~~~~~iRis~~-~~~~~~~~~~al~~~~~~~~~ 368 (369)
T PRK08153 314 AFARAVLDGLI-ARDIFVRMPGVA-PLDRCIRVSCG-PDEELDLFAEALPEALEAARK 368 (369)
T ss_pred ccHHHHHHHHH-HCCeEEeeCCCC-CCCCeEEEecC-CHHHHHHHHHHHHHHHHHhhc
Confidence 13556666654 5699995 6543 23579999998 578999999999999875543
No 89
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-41 Score=296.97 Aligned_cols=329 Identities=24% Similarity=0.426 Sum_probs=275.0
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhcCC--CCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHh-hCCC
Q 014603 80 FNCYSSTVGILPARRAIADYLNRDLP--YKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARAT-HSHL 156 (422)
Q Consensus 80 ~~~y~~~~g~~~lr~~ia~~l~~~~~--~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~-~~g~ 156 (422)
...|.+..|++++|+++|+|+.+..| ...+|+++++++|+|.|++.+..+|.+|||..|++.|.|+++..-++ ..|+
T Consensus 114 la~fqdy~Gl~~frqa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~gfdrdl~~rTgv 193 (471)
T KOG0256|consen 114 LAMFQDYHGLPSFRQAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCLADPGDAFLVPTPYYPGFDRDLRWRTGV 193 (471)
T ss_pred HhhcccccCchHHHHHHHHHHHHHhCCCCccCccceEEecccchhhHHHHHHhcCCCceeeecCCCCCcccccceeccCc
Confidence 34788899999999999999987554 45688999999999999999999999999999999999999976666 4688
Q ss_pred eEEEeeccCCCCcccCHHHHHHhhcC------CceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEccccccccc
Q 014603 157 EVRHFDLLPAKGWEVDLDAVEALADE------NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAF 230 (422)
Q Consensus 157 ~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~ 230 (422)
+++++....++++.++.+.+|+++.+ +.+.++++||+||-|++++++++..++.++.++|+.+|+||+|++..|
T Consensus 194 eivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sVF 273 (471)
T KOG0256|consen 194 EIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAGSVF 273 (471)
T ss_pred eEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhccccc
Confidence 99999888888999999999986632 678899999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccC-----CCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhhhccCcchHHHHHHHH
Q 014603 231 GNTPFVPMGVFG-----SIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQGAVPQ 305 (422)
Q Consensus 231 ~~~~~~~~~~~~-----~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 305 (422)
+...+.++.++. ..+++.++.|+||-||+||+|+|.+...+ +.+.....+...+ +..+...|..+..
T Consensus 274 ~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~n-------e~VvsaA~kmssf-~~vSs~tQ~~la~ 345 (471)
T KOG0256|consen 274 DKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNN-------EDVVSAATKMSSF-GLVSSQTQYLLAS 345 (471)
T ss_pred CccCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecC-------hHHHHHHHHHhhc-cCCcHHHHHHHHH
Confidence 877666654332 33568999999999999999999999865 4566666555544 5778899999999
Q ss_pred HHhhch--HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCccccc-CCCCHHHHHHHHHHhcCeEEe
Q 014603 306 ILEKTE--EEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLE-GINSDMEFALKLAKEESVIVL 382 (422)
Q Consensus 306 ~l~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~gi~v~ 382 (422)
.|.+.. +.++.+...+++.+.+++.+.|+++ ||.+. ...+|.|+|+.+..--.. ......++.++++.+-++.+.
T Consensus 346 LLSD~~f~~~yl~en~~Rl~~rh~~~~~gLk~l-gI~cl-~s~AGlF~wvDlr~lL~s~tfe~El~Lw~~i~~~vklnlS 423 (471)
T KOG0256|consen 346 LLSDEEFTREYLRENNKRLRIRHRYIVEGLKAL-GIPCL-KSNAGLFCWVDLRKLLTSLTFEGELELWERILDNVKLNLS 423 (471)
T ss_pred HhchHHHHHHHHHHHHHHHHHHHHHHHhhHHhc-CCcee-ecCCeeEEEEEhHHhcCcCChHHHHHHHHHHHHhhccccC
Confidence 998743 6789999999999999999999998 88844 888999999988542111 112345667777777799999
Q ss_pred cCCCCCC--CCeEEEEeccC-hHHHHHHHHHHHHHHHHh
Q 014603 383 PGITVGL--KDWLRITFAVE-PSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 383 ~g~~~~~--~~~iRis~~~~-~~~l~~~~~~l~~~~~~~ 418 (422)
||..|.. ++|+|+||++. ++.++-+++||++++.++
T Consensus 424 pG~s~~C~EpGWFRvcFAn~~~~t~~~am~Ri~~~~~~~ 462 (471)
T KOG0256|consen 424 PGSSCHCHEPGWFRVCFANMSEETLEVAMRRLKQFLDSQ 462 (471)
T ss_pred CCCcceecCCCeEEEEeccCCHHHHHHHHHHHHHHHHhh
Confidence 9998765 89999999954 555555999999998754
No 90
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.4e-40 Score=311.26 Aligned_cols=326 Identities=20% Similarity=0.317 Sum_probs=259.2
Q ss_pred CCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHH
Q 014603 45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIE 124 (422)
Q Consensus 45 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~ 124 (422)
+..++|+.|.+. +++|+.+.+++.+.+.......|++. +.+++|+++++++ ++++++|++|+|+++++.
T Consensus 22 ~~~~~l~~~~~~----~~~p~~~~~a~~~~~~~~~~~~y~~~-~~~~lr~~ia~~~------~~~~~~i~it~G~~~~l~ 90 (351)
T PRK14807 22 PYKYKMDANETP----FELPEEVIKNIQEIVKSSQVNIYPDP-TAEKLREELARYC------SVVPTNIFVGNGSDEIIH 90 (351)
T ss_pred CceeEccCCCCC----CCCCHHHHHHHHHHhhcCcccCCCCc-cHHHHHHHHHHHh------CCCcccEEEecCHHHHHH
Confidence 456899999965 68889999999887765445678764 4689999999998 568899999999999999
Q ss_pred HHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC-CceEEEEeCCCCCcccccCHH
Q 014603 125 VILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE-NTVALVIINPGNPCGNVYTYQ 203 (422)
Q Consensus 125 ~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~i~~p~nptG~~~~~~ 203 (422)
.++++++++||+|++++|+|..+...++..|.+++.++.+ +++.+|++.+++.+++ +++++++++|+||||.+++.+
T Consensus 91 ~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~~~~~~k~v~l~~p~NPtG~~~~~~ 168 (351)
T PRK14807 91 LIMLAFINKGDVVIYPHPSFAMYSVYSKIAGAVEIPVKLK--EDYTYDVGSFIKVIEKYQPKLVFLCNPNNPTGSVIERE 168 (351)
T ss_pred HHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEeecC--CCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHH
Confidence 9999999999999999999999988889999999988875 3467899999998865 889999999999999999988
Q ss_pred HHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHH
Q 014603 204 HLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVD 283 (422)
Q Consensus 204 ~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~ 283 (422)
++.++++ +++.++|+||+|..+. +....+ .+...+++++++||||.|+++|+|+||++++ +++++
T Consensus 169 ~l~~l~~---~~~~~~ivDe~y~~~~--~~~~~~--~~~~~~~vi~~~S~SK~~~~~GlRiG~~v~~--------~~~~~ 233 (351)
T PRK14807 169 DIIKIIE---KSRGIVVVDEAYFEFY--GNTIVD--VINEFENLIVLRTLSKAFGLAGLRVGYAVAN--------ENILK 233 (351)
T ss_pred HHHHHHH---hCCCEEEEeCcchhhc--ccchHH--HhhhCCCEEEEecchHhcccchhceeeeecC--------HHHHH
Confidence 8777765 5677899999998752 322212 1233467999999999999999999999985 46788
Q ss_pred HHHhhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccccCC
Q 014603 284 SIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGI 363 (422)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 363 (422)
.+...... ...+.+.|.++..+++. .++++..+.++++++.+.+.|++++++. + .|.+|.|+|++++
T Consensus 234 ~~~~~~~~-~~~~~~~q~~~~~~l~~---~~~~~~~~~~~~~r~~l~~~l~~~~g~~-~-~~~~~~~~~i~~~------- 300 (351)
T PRK14807 234 YLNLVKSP-YNINSLSQVIALKVLRT---GVLKERVNYILNERERLIKELSKIPGIK-V-YPSKTNFILVKFK------- 300 (351)
T ss_pred HHHHccCC-CCcCHHHHHHHHHHHhH---HHHHHHHHHHHHHHHHHHHHHHhCCCcE-E-CcCCccEEEEEcC-------
Confidence 77765543 35678899999999874 4567777788888999999998887876 4 4566889998885
Q ss_pred CCHHHHHHHHHHhcCeEEecCCC-CCCCCeEEEEeccChHHHHHHHHHHHHH
Q 014603 364 NSDMEFALKLAKEESVIVLPGIT-VGLKDWLRITFAVEPSALEDGLGRMKAF 414 (422)
Q Consensus 364 ~~~~~~~~~l~~~~gi~v~~g~~-~~~~~~iRis~~~~~~~l~~~~~~l~~~ 414 (422)
+..++...+ .++||.|.++.. ++..+++||+++.+ ++.+++++.|+++
T Consensus 301 -~~~~~~~~l-~~~gV~v~~~~~~~~~~~~iRis~~~~-~~~~~l~~~l~~~ 349 (351)
T PRK14807 301 -DADYVYQGL-LERGILVRDFSKVEGLEGALRITVSSC-EANDYLINGLKEL 349 (351)
T ss_pred -CHHHHHHHH-HHCCEEEEECCCCCCCCCeEEEEcCCH-HHHHHHHHHHHHh
Confidence 345555555 566999988653 34478999999853 4566666666554
No 91
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=100.00 E-value=4.8e-41 Score=314.79 Aligned_cols=329 Identities=21% Similarity=0.367 Sum_probs=268.8
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 122 (422)
.+.++|||++|++. ++++|.+++++.++... ...|++..+ +++|+.+++++ ++++++|++++|++++
T Consensus 17 ~~~~~i~l~~~~~~----~~~~~~~~~a~~~~~~~--~~~y~~~~~-~~lr~~ia~~~------~~~~~~i~~~~G~~~~ 83 (346)
T TIGR01141 17 GGKEVIKLNSNENP----FGPPPKAKEALRAEADK--LHRYPDPDP-AELKQALADYY------GVDPEQILLGNGSDEI 83 (346)
T ss_pred CCCceEEccCCCCC----CCCCHHHHHHHHHhHHH--hhcCCCCCH-HHHHHHHHHHh------CcChHHEEEcCCHHHH
Confidence 35689999999965 67789999999987643 346877655 89999999999 4678899999999999
Q ss_pred HHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCH
Q 014603 123 IEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTY 202 (422)
Q Consensus 123 ~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~ 202 (422)
+..++.+++++||+|++++|+|..+...++..|.+++.++.+++ +.+|++.+++.+.++++++++++|+||||.+++.
T Consensus 84 l~~~~~~l~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~~~--~~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~~~ 161 (346)
T TIGR01141 84 IELLIRAFLEPGDAVLVPPPTYSMYEISAKIHGAEVVKVPLDED--GQLDLEDILVAIDDKPKLVFLCSPNNPTGNLLSR 161 (346)
T ss_pred HHHHHHHhcCCCCEEEEcCCCHHHHHHHHHHcCCeEEEeccCCC--CCCCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCH
Confidence 99999999999999999999999888888899999999887543 5689999999888889999999999999999999
Q ss_pred HHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHH
Q 014603 203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIV 282 (422)
Q Consensus 203 ~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 282 (422)
+++.++++.|+ +|+++|+|++|+.+.+.+. . .......+++++++|+||+|+++|+|+||++++ +++.
T Consensus 162 ~~~~~l~~~~~-~~~~ii~D~~y~~~~~~~~-~--~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~--------~~~~ 229 (346)
T TIGR01141 162 SDIEAVLERTP-EDALVVVDEAYGEFSGEPS-T--LPLLAEYPNLIVLRTLSKAFGLAGLRIGYAIAN--------AEII 229 (346)
T ss_pred HHHHHHHHhCC-CCcEEEEECchhhhcCCcc-H--HHHHhhCCCEEEEehhhHhhhchhhhceeeecC--------HHHH
Confidence 99999999887 7999999999987654321 1 111222346899999999998999999999985 4677
Q ss_pred HHHHhhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccccC
Q 014603 283 DSIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEG 362 (422)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 362 (422)
+++...... .+.+.++|.++..+++.. .++++.+++++++++.+++.|++++++. + .|.+|.|+|+.++.
T Consensus 230 ~~~~~~~~~-~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~~g~~-~-~~~~g~~~~~~~~~----- 299 (346)
T TIGR01141 230 DALNKVRAP-FNLSRLAQAAAIAALRDD--DFIEKTVEEINAERERLYDGLKKLPGLE-V-YPSDANFVLIRFPR----- 299 (346)
T ss_pred HHHHhccCC-CCCCHHHHHHHHHHhCCH--HHHHHHHHHHHHHHHHHHHHHHhcCCCE-E-CCCcCCEEEEecCC-----
Confidence 777765433 356788899888888753 3688888999999999999999987876 4 45567899988863
Q ss_pred CCCHHHHHHHHHHhcCeEEecCCCCCC-CCeEEEEeccChHHHHHHHHHHH
Q 014603 363 INSDMEFALKLAKEESVIVLPGITVGL-KDWLRITFAVEPSALEDGLGRMK 412 (422)
Q Consensus 363 ~~~~~~~~~~l~~~~gi~v~~g~~~~~-~~~iRis~~~~~~~l~~~~~~l~ 412 (422)
++.++...+. ++||.+.||..|+. ++++|+|++ ++++++++++.|+
T Consensus 300 --~~~~~~~~L~-~~gI~v~~g~~f~~~~~~iRls~~-~~~~i~~~~~~l~ 346 (346)
T TIGR01141 300 --DADALFEALL-EKGIIVRDLNSYPGLPNCLRITVG-TREENDRFLAALR 346 (346)
T ss_pred --CHHHHHHHHH-HCCeEEEeCCCcCCCCCeEEEecC-CHHHHHHHHHHhC
Confidence 3566776664 57999999987744 789999988 5788999888763
No 92
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=5.4e-41 Score=313.73 Aligned_cols=321 Identities=19% Similarity=0.317 Sum_probs=255.4
Q ss_pred CCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHH
Q 014603 45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIE 124 (422)
Q Consensus 45 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~ 124 (422)
...++|+.+... +++++.+ .....+.|+... ..++++++++++ ++++++|++|+|+++++.
T Consensus 28 ~~~~~l~~Nenp----~~~~~~~--------~~~~~~~Yp~~~-~~~l~~~~a~~~------g~~~~~I~~~~Gs~e~i~ 88 (351)
T PRK01688 28 NGDVWLNANEYP----TAVEFQL--------TQQTLNRYPECQ-PKAVIENYAAYA------GVKPEQVLVSRGADEGIE 88 (351)
T ss_pred CCceEecCCCCC----CCCChhh--------cccccccCCCCC-hHHHHHHHHHHh------CCCHHHEEEcCCHHHHHH
Confidence 346899988743 4555543 112356787643 479999999998 678999999999999999
Q ss_pred HHHHHhcCCC-CEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHH
Q 014603 125 VILTVLARPG-ANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQ 203 (422)
Q Consensus 125 ~~~~~l~~~g-d~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~ 203 (422)
.++++++++| |.|+++.|+|..|...++..|.+++.++++. ++.+|++.+++.+ ++++++++|||+||||.+++.+
T Consensus 89 ~~~~~~~~~g~~~vli~~P~y~~y~~~~~~~G~~~~~v~~~~--~~~~d~~~l~~~~-~~~~lv~l~nPnNPTG~~~~~~ 165 (351)
T PRK01688 89 LLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVEIRTVPTLD--NWQLDLPAIADNL-DGVKVVYVCSPNNPTGNLINPQ 165 (351)
T ss_pred HHHHHhcCCCCCEEEEcCCCHHHHHHHHHHcCCEEEEeecCC--CCCCCHHHHHHhc-cCCcEEEEeCCCCCCCCCCCHH
Confidence 9999999887 8999999999999999999999999998753 4789999998877 5789999999999999999999
Q ss_pred HHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHH
Q 014603 204 HLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVD 283 (422)
Q Consensus 204 ~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~ 283 (422)
++++|++.|++ +.+||+||+|..+.... .....+...+++++++||||.||++|+|+||++++ +++++
T Consensus 166 ~l~~l~~~~~~-~~~vivDEay~~f~~~~---s~~~~~~~~~n~iv~rSfSK~~glaGlRiGy~i~~--------~~~i~ 233 (351)
T PRK01688 166 DLRTLLELTRG-KAIVVADEAYIEFCPQA---SLAGWLAEYPHLVILRTLSKAFALAGLRCGFTLAN--------EEVIN 233 (351)
T ss_pred HHHHHHHhCCC-CcEEEEECchhhcCCCC---ChHHHHhhCCCEEEEecchHhhcCHHHHHhHHhCC--------HHHHH
Confidence 99999999986 68899999998865221 11122233468999999999999999999999985 56888
Q ss_pred HHHhhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccccCC
Q 014603 284 SIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGI 363 (422)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 363 (422)
.+...... ...+.+.+.++.++|++...+++++.++.+.++++.+.+.|++++++. ...|++++|+|++++
T Consensus 234 ~l~~~~~~-~~v~~~~~~~a~~~L~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~~~ps~~nfi~~~~~------- 304 (351)
T PRK01688 234 LLLKVIAP-YPLSTPVADIAAQALSPQGIAAMRERVAEINANRQWLIAALKEIPCVE-QVFDSETNYILARFT------- 304 (351)
T ss_pred HHHhccCC-CCCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHhCCCCC-eECCCCCcEEEEEcC-------
Confidence 77766543 345667788888888753346778888889999999999999987764 236778999999885
Q ss_pred CCHHHHHHHHHHhcCeEEecCCCC-CCCCeEEEEeccChHHHHHHHHHH
Q 014603 364 NSDMEFALKLAKEESVIVLPGITV-GLKDWLRITFAVEPSALEDGLGRM 411 (422)
Q Consensus 364 ~~~~~~~~~l~~~~gi~v~~g~~~-~~~~~iRis~~~~~~~l~~~~~~l 411 (422)
++.++...++ ++||.|+++..+ +.++++|||+++ .++.+++++.|
T Consensus 305 -~~~~l~~~L~-~~gi~vr~~~~~~~~~~~iRis~~~-~~e~~~l~~al 350 (351)
T PRK01688 305 -ASSAVFKSLW-DQGIILRDQNKQPGLSNCLRITIGT-REECQRVIDAL 350 (351)
T ss_pred -CHHHHHHHHH-HCCeEEEECCCcCCCCCeEEEeCCC-HHHHHHHHHhh
Confidence 3566777665 669999977654 557899999984 57888888776
No 93
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=4.7e-40 Score=308.71 Aligned_cols=303 Identities=19% Similarity=0.298 Sum_probs=242.5
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCC-CEEEecCCCccchHHHHhhCCCeE
Q 014603 80 FNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPG-ANILLPRPGFPYYEARATHSHLEV 158 (422)
Q Consensus 80 ~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g-d~Vl~~~~~~~~~~~~~~~~g~~~ 158 (422)
...|+... .+++|+++++++ ++++++|++|+|+++++..++++++.+| |.|++++|+|..+...++..|.++
T Consensus 53 ~~~Y~~~~-~~~lr~~ia~~~------~~~~~~I~~t~G~~~~l~~~~~~~~~~g~~~vlv~~p~y~~~~~~~~~~g~~~ 125 (364)
T PRK04781 53 TRRYPDPQ-PPGLRSALAALY------GCAPEQLLIGRGSDEAIDLLVRALCVPGRDAVLVTPPVFGMYAVCARLQNAPL 125 (364)
T ss_pred hccCCCCC-HHHHHHHHHHHh------CcChHHEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHHHHHHHcCCEE
Confidence 34687654 689999999998 5688999999999999999999999898 799999999998888888899999
Q ss_pred EEeeccC-CCCcccCHHHHHHh-hcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCC
Q 014603 159 RHFDLLP-AKGWEVDLDAVEAL-ADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFV 236 (422)
Q Consensus 159 ~~~~~~~-~~~~~~d~~~l~~~-~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~ 236 (422)
+.+++.. ++++.+|++.+++. ..++++++++++|+||||.+++.+++++++++|++ +++||+||+|..+.+...
T Consensus 126 ~~v~~~~~~~~~~~d~~~l~~~~~~~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~-~~~iI~Deay~~f~~~~~--- 201 (364)
T PRK04781 126 VEVPLVDGADGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAIALDQIERALQALQG-KALVVVDEAYGEFSDVPS--- 201 (364)
T ss_pred EEEecCCCccCCCcCHHHHHHHHhccCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCC-CcEEEEeCcchhhcCCcc---
Confidence 9999743 34567788887654 46688999999999999999999999999999864 799999999998764321
Q ss_pred CccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhhhccCcchHHHHHHHHHHhhchHHHHH
Q 014603 237 PMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQGAVPQILEKTEEEFFS 316 (422)
Q Consensus 237 ~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~ 316 (422)
.....+..+++++++||||+|++||+|+||++++ +++++.+...... .+.+.+.|.++..+|+.....+..
T Consensus 202 ~~~~~~~~~~vi~~~SfSK~~gl~GlRvGy~v~~--------~~l~~~l~~~~~~-~~~~~~~~~~a~~~l~~~~~~~~~ 272 (364)
T PRK04781 202 AVGLLARYDNLAVLRTLSKAHALAAARIGSLIAN--------AELIAVLRRCQAP-YPVPTPCAALAEQALSAPALAVTA 272 (364)
T ss_pred hHHHHhhCCCEEEEecChhhcccccceeeeeeCC--------HHHHHHHHhccCC-CCCCHHHHHHHHHHHhcccHHHHH
Confidence 1222344568999999999999999999999986 5788888776643 356778888888888764335566
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCC-CCCCeEEE
Q 014603 317 KITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITV-GLKDWLRI 395 (422)
Q Consensus 317 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~-~~~~~iRi 395 (422)
+..++++++++.+.+.|++++++. ...|++|+|+|++++ +..++...+ .++||.|.+|..| +.++++||
T Consensus 273 ~~~~~~~~~r~~l~~~L~~~~~~~-~~~p~~g~f~~~~~~--------~~~~~~~~l-~~~gI~v~~~~~~~~~~~~~Ri 342 (364)
T PRK04781 273 RRVAEVRAERERLHAALAQLPGVR-RVYPSQGNFLLVRFD--------DAEAAFQAL-LAAGVVVRDQRAAPRLSDALRI 342 (364)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCC-eECCCCCcEEEEEcC--------CHHHHHHHH-HHCCeEEeeCCCCCCCCCeEEE
Confidence 666788999999999999987764 236888999999886 245555554 6789999999765 34689999
Q ss_pred EeccChHHHHHHHHHHHH
Q 014603 396 TFAVEPSALEDGLGRMKA 413 (422)
Q Consensus 396 s~~~~~~~l~~~~~~l~~ 413 (422)
+++.+ ++.+++++.|++
T Consensus 343 s~~~~-~~~~~l~~al~~ 359 (364)
T PRK04781 343 TLGTP-EQNDRVLAALQR 359 (364)
T ss_pred eCCCH-HHHHHHHHHHHH
Confidence 99853 556666666554
No 94
>PRK07908 hypothetical protein; Provisional
Probab=100.00 E-value=1.1e-39 Score=305.31 Aligned_cols=325 Identities=18% Similarity=0.220 Sum_probs=255.5
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 122 (422)
.+.+++||+.+.+. +++++.+++++.+.+.. ...|++..|.+++|+++++++ ++++++|++|+|++++
T Consensus 20 ~~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~--~~~Y~~~~g~~~lr~aia~~~------~~~~~~I~it~Ga~~a 87 (349)
T PRK07908 20 AGPGLLDFAVNVRH----DTPPEWLRERLAARLGD--LAAYPSTEDERRARAAVAARH------GRTPDEVLLLAGAAEG 87 (349)
T ss_pred CCCCeEEecCCCCC----CCCCHHHHHHHHHHhhH--hhcCCCccchHHHHHHHHHHh------CcChhhEEECCCHHHH
Confidence 46789999999854 67889999999988754 457988889999999999998 5688999999999999
Q ss_pred HHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCH
Q 014603 123 IEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTY 202 (422)
Q Consensus 123 ~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~ 202 (422)
+..+++ +++ +.++++.|+|..+...++..|.+++.++++. ++.+|++.+ .++++++++++|+||||.++|.
T Consensus 88 l~~~~~--l~~-~~viv~~P~y~~~~~~~~~~G~~i~~v~~~~--~~~~d~~~l----~~~~~~i~l~np~NPTG~~~~~ 158 (349)
T PRK07908 88 FALLAR--LRP-RRAAVVHPSFTEPEAALRAAGIPVHRVVLDP--PFRLDPAAV----PDDADLVVIGNPTNPTSVLHPA 158 (349)
T ss_pred HHHHHh--cCC-CeEEEeCCCChHHHHHHHHcCCEEEeeccCc--ccCcChhHh----ccCCCEEEEcCCCCCCCCCcCH
Confidence 999988 456 5677889999999999999999999998754 267888754 4568899999999999999998
Q ss_pred HHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHH
Q 014603 203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIV 282 (422)
Q Consensus 203 ~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 282 (422)
+++.+ +|+ ++.++|+||+|+.+.. +. ..++...+ .+++++++||||.|+++|+|+||++++ ++++
T Consensus 159 ~~l~~---l~~-~~~~iIvDe~y~~~~~-~~-~~~l~~~~-~~~~i~i~S~SK~~~l~GlRiG~~~~~--------~~~~ 223 (349)
T PRK07908 159 EQLLA---LRR-PGRILVVDEAFADAVP-GE-PESLAGDD-LPGVLVLRSLTKTWSLAGLRVGYALGA--------PDVL 223 (349)
T ss_pred HHHHH---HHh-cCCEEEEECcchhhcc-CC-cccccccc-CCCEEEEeecccccCCccceeeeeecC--------HHHH
Confidence 76555 454 4788999999987643 32 23333332 246899999999999999999999985 4677
Q ss_pred HHHHhhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccccC
Q 014603 283 DSIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEG 362 (422)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 362 (422)
+.+...... ...+.+.+.++..+++.....++++.+++++++++.+.+.|+++ ++. +..|.+|+|+|++++.
T Consensus 224 ~~~~~~~~~-~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~-~~~p~~g~~~~~~~~~----- 295 (349)
T PRK07908 224 ARLTRGRAH-WPVGTLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRAV-GAR-VVDPAAAPFVLVRVPD----- 295 (349)
T ss_pred HHHHhcCCC-CCccHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhC-CcE-eccCCCceEEEEECCc-----
Confidence 777765433 34556777777777764335678888999999999999999988 776 4467889999998863
Q ss_pred CCCHHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEeccChHHHHHHHHHHHHHHH
Q 014603 363 INSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAVEPSALEDGLGRMKAFYD 416 (422)
Q Consensus 363 ~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRis~~~~~~~l~~~~~~l~~~~~ 416 (422)
..++ ..+++++||.+.||..|+. ++++|||++ ++++++++++.|++++.
T Consensus 296 ---~~~~-~~~l~~~gI~v~~g~~f~~~~~~~vRis~~-~~~~~~~l~~al~~~~~ 346 (349)
T PRK07908 296 ---AELL-RKRLRERGIAVRRGDTFPGLDPDYLRLAVR-PRAEVPVLVQALAEILK 346 (349)
T ss_pred ---HHHH-HHHHHhCCEEEEECCCCCCCCCCeEEEEeC-CCccHHHHHHHHHHHHh
Confidence 3344 4455778999999998853 689999996 45677788877777653
No 95
>PRK03321 putative aminotransferase; Provisional
Probab=100.00 E-value=6.3e-40 Score=307.70 Aligned_cols=329 Identities=22% Similarity=0.325 Sum_probs=262.2
Q ss_pred CCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHH
Q 014603 45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIE 124 (422)
Q Consensus 45 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~ 124 (422)
.++|+|+.+.+. +++++.+.+++.+.+.. ...|+ ..|.+++|+++++++ ++++++|++++|+++++.
T Consensus 22 ~~~i~l~~~~~~----~~~~~~~~~a~~~~~~~--~~~y~-~~g~~~lr~~ia~~~------~~~~~~I~~~~G~~~~l~ 88 (352)
T PRK03321 22 PGAIKLSSNETP----FGPLPSVRAAIARAAAG--VNRYP-DMGAVELRAALAEHL------GVPPEHVAVGCGSVALCQ 88 (352)
T ss_pred ccceeccCCCCC----CCCCHHHHHHHHHHHHh--cCcCC-CCcHHHHHHHHHHHh------CcCHHHEEECCCHHHHHH
Confidence 468999999866 56778999999887653 45675 468999999999999 467889999999999999
Q ss_pred HHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHH
Q 014603 125 VILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQH 204 (422)
Q Consensus 125 ~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~ 204 (422)
.++..++++||+|+++.|+|..+...++..|.+++.++.+++ +.+|++.+++.++++++++++++|+||||.+++.++
T Consensus 89 ~~~~~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~v~~~~~--~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~ 166 (352)
T PRK03321 89 QLVQATAGPGDEVIFAWRSFEAYPILVQVAGATPVQVPLTPD--HTHDLDAMAAAITDRTRLIFVCNPNNPTGTVVTPAE 166 (352)
T ss_pred HHHHHhcCCCCEEEeCCCCHHHHHHHHHHcCCEEEEccCCCC--CCCCHHHHHHhhccCCCEEEEeCCCCCcCCCcCHHH
Confidence 999999999999999999999888888889999999887543 568999999988888999999999999999999998
Q ss_pred HHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHH
Q 014603 205 LQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDS 284 (422)
Q Consensus 205 l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~ 284 (422)
+.++++.| ++|++||+||+|..+.+++.....+..+...+++++++||||.|+++|+|+||++++ +++++.
T Consensus 167 l~~l~~~~-~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~--------~~~~~~ 237 (352)
T PRK03321 167 LARFLDAV-PADVLVVLDEAYVEYVRDDDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGH--------PEVIAA 237 (352)
T ss_pred HHHHHHhC-CCCeEEEEechHHHhccCcCCCcHHHHHhhCCCEEEEecchHHhhhHHHhhhhhcCC--------HHHHHH
Confidence 88888876 469999999999988876543333334444568999999999999999999999986 468888
Q ss_pred HHhhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccccCCC
Q 014603 285 IKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGIN 364 (422)
Q Consensus 285 ~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 364 (422)
+.... ...+.+.++|.++.++|.. .+.+ .+..+++.+.++.+.+.|++. ++. . .+.+|+|+|++++.
T Consensus 238 ~~~~~-~~~~~s~~~q~~a~~~l~~-~~~~-~~~~~~~~~~r~~~~~~L~~~-~~~-~-~~~~g~~i~i~l~~------- 304 (352)
T PRK03321 238 LRKVA-VPFSVNSLAQAAAIASLAA-EDEL-LERVDAVVAERDRVRAALRAA-GWT-V-PPSQANFVWLPLGE------- 304 (352)
T ss_pred HHHhc-CCCCCCHHHHHHHHHHhcC-HHHH-HHHHHHHHHHHHHHHHHHHHC-CCc-c-CCCCCCEEEEeCCC-------
Confidence 77654 2346788899888888864 2333 444455556667888999887 665 3 34568899998853
Q ss_pred CHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEeccChHHHHHHHHHHHHHHH
Q 014603 365 SDMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALEDGLGRMKAFYD 416 (422)
Q Consensus 365 ~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~l~~~~~~l~~~~~ 416 (422)
++.++...+ +++||.+.+ |+ .+++||+++ +.++.++++++|++++.
T Consensus 305 ~~~~~~~~l-~~~gI~v~~---~~-~~~iRi~~~-~~~~~~~~~~al~~~~~ 350 (352)
T PRK03321 305 RTADFAAAA-AEAGVVVRP---FA-GEGVRVTIG-APEENDAFLRAARAWRA 350 (352)
T ss_pred CHHHHHHHH-HHCCEEEEc---cC-CCcEEEeeC-CHHHHHHHHHHHHHHhc
Confidence 356676665 668999987 33 356999985 45788888888887653
No 96
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=2.9e-39 Score=304.57 Aligned_cols=326 Identities=21% Similarity=0.323 Sum_probs=258.5
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEE-ecCHHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYL-TLGCTQ 121 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~-~~g~~~ 121 (422)
++.++|+|+.|++. ++++|.+.+++.+.+.. ...|++.. .+++|+++++++ ++++++|++ ++|+++
T Consensus 32 ~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~--~~~y~~~~-~~~lr~~ia~~~------~~~~~~i~~~~~Ga~~ 98 (361)
T PRK00950 32 DPESIIKLGSNENP----LGPSPKAVEAIEKELSK--IHRYPEPD-APELREALSKYT------GVPVENIIVGGDGMDE 98 (361)
T ss_pred CccceEEccCCCCC----CCCCHHHHHHHHHHHHh--hcCCCCCC-HHHHHHHHHHHh------CCCHHHEEEeCCCHHH
Confidence 35589999999854 56788899998887654 34677654 489999999998 567889999 789999
Q ss_pred HHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccC
Q 014603 122 AIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYT 201 (422)
Q Consensus 122 a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~ 201 (422)
++..++++++++||+|+++.|+|..+...++..|.+++.++.+ +++.+|++.+++.++++++++++++|+||||.+++
T Consensus 99 ~i~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~l~~~~~~~~~~v~~~~p~nptG~~~~ 176 (361)
T PRK00950 99 VIDTLMRTFIDPGDEVIIPTPTFSYYEISAKAHGAKPVYAKRE--EDFSLDVDSVLNAITEKTKVIFLCTPNNPTGNLIP 176 (361)
T ss_pred HHHHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeecC--CCCCcCHHHHHHHhccCCCEEEEeCCCCCCCCCcC
Confidence 9999999999999999999999999888888899999888743 45679999999988878899999999999999998
Q ss_pred HHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhH
Q 014603 202 YQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGI 281 (422)
Q Consensus 202 ~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~ 281 (422)
.+++.++ |+++|+++|+||+|..+. +.....+ ....+++++++||||.|+++|+|+||++++ +++
T Consensus 177 ~~~l~~l---~~~~~~~li~De~y~~~~--~~~~~~~--~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~--------~~~ 241 (361)
T PRK00950 177 EEDIRKI---LESTDALVFVDEAYVEFA--EYDYTPL--ALEYDNLIIGRTFSKVFGLAGLRIGYGFVP--------EWL 241 (361)
T ss_pred HHHHHHH---HHHCCcEEEEECchhhhC--ccchHHH--HHhcCCEEEEEeehHhhcCchhhcchhcCC--------HHH
Confidence 7776655 557899999999998764 2211121 222357899999999999999999999986 467
Q ss_pred HHHHHhhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCccccc
Q 014603 282 VDSIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLE 361 (422)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 361 (422)
++.+....... ..+.+.+.++..+++. .+++++..++++++++.+.+.|+ +. . .|.+++|+|+.++.
T Consensus 242 ~~~~~~~~~~~-~~~~~~~~~a~~~l~~--~~~~~~~~~~~~~~r~~l~~~l~----~~-~-~~~~~~~i~~~~~~---- 308 (361)
T PRK00950 242 IDYYMRAKTPF-SLTRLSQAAAIAALSD--KEYIEKSIEHGIKSREYLYNELP----FK-V-YPSEANFVLVDVTP---- 308 (361)
T ss_pred HHHHHHhcCCC-CCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHhhcC----ee-E-CCCcceEEEEECCC----
Confidence 77776655432 4667888888888864 46677888888888888887775 33 2 46678899998843
Q ss_pred CCCCHHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEeccChHHHHHHHHHHHHHH
Q 014603 362 GINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAVEPSALEDGLGRMKAFY 415 (422)
Q Consensus 362 ~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRis~~~~~~~l~~~~~~l~~~~ 415 (422)
.++.++...+. ++||.+.||..|+. ++++|++++ +.+++++++++|++++
T Consensus 309 --~~~~~~~~~l~-~~gv~v~~~~~f~~~~~~~lRis~~-~~~~~~~l~~~L~~il 360 (361)
T PRK00950 309 --MTAKEFCEELL-KRGVIVRDCTSFRGLGDYYIRVSIG-TFEENERFLEILKEIV 360 (361)
T ss_pred --CCHHHHHHHHH-HCCEEEeeCCccCCCCCCeEEEECC-CHHHHHHHHHHHHHHh
Confidence 15677777775 56999999887754 569999998 4568999999998865
No 97
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.4e-39 Score=303.39 Aligned_cols=321 Identities=17% Similarity=0.253 Sum_probs=249.2
Q ss_pred CCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHH
Q 014603 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI 123 (422)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~ 123 (422)
+...++|+.+... +++++.+ . .. ..+.|++. +.++||+++|+++ ++++++|++|+|+++++
T Consensus 30 ~~~~~~l~~ne~~----~~~~~~~-----~-~~--~~~~Yp~~-~~~~Lr~aia~~~------~~~~~~I~it~Gs~~~i 90 (354)
T PRK04635 30 GRGDIWINANESP----FNNEYKL-----D-LA--RLNRYPEC-QPPELINAYSAYA------GVAPEQILTSRGADEAI 90 (354)
T ss_pred CCCcEEeeCCCCC----CCCChhh-----h-hH--HhccCCCC-CHHHHHHHHHHHh------CcCHHHEEEeCCHHHHH
Confidence 3456899998844 4555432 1 11 24578875 4799999999998 67999999999999999
Q ss_pred HHHHHHhcCCC-CEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCH
Q 014603 124 EVILTVLARPG-ANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTY 202 (422)
Q Consensus 124 ~~~~~~l~~~g-d~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~ 202 (422)
..++++++++| |+|+++.|+|..|...++..|.+++.++++. ++.+|++.++. + ++++++++++|+||||.+++.
T Consensus 91 ~~~~~~~~~~g~d~vlv~~P~y~~y~~~~~~~g~~v~~v~~~~--~~~~~~~~l~~-~-~~~~li~i~nP~NPTG~~~~~ 166 (354)
T PRK04635 91 ELLIRAFCEPGQDSIACFGPTYGMYAISAETFNVGVKALPLTA--DYQLPLDYIEQ-L-DGAKLVFICNPNNPTGTVIDR 166 (354)
T ss_pred HHHHHHhcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEEecCC--CCCCCHHHHHh-c-cCCCEEEEeCCCCCCCccCCH
Confidence 99999999998 8999999999999998999999999998753 46788888874 3 578999999999999999999
Q ss_pred HHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHH
Q 014603 203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIV 282 (422)
Q Consensus 203 ~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 282 (422)
+++++|++.|+ +++||+||+|..+... .....+ ....+++++++||||+|+++|+|+||++++ ++++
T Consensus 167 ~~l~~l~~~~~--~~~vivDeay~~~~~~-~s~~~~--~~~~~~~iv~~S~SK~~~l~GlRlG~~i~~--------~~~~ 233 (354)
T PRK04635 167 ADIEQLIEMTP--DAIVVVDEAYIEFCPE-YSVADL--LASYPNLVVLRTLSKAFALAGARCGFTLAN--------EELI 233 (354)
T ss_pred HHHHHHHHhCC--CcEEEEeCchHhhccC-cchHHH--HhhCCCEEEEechHHHhhhhHHHHhhhhCC--------HHHH
Confidence 99999999876 4999999999876532 111111 223467899999999999999999999986 4677
Q ss_pred HHHHhhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccccC
Q 014603 283 DSIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEG 362 (422)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 362 (422)
+.+...... .+.+.+.+.++.++|.+....++.+.++.++++++.+.+.|++++++. + .|..|.|+|++++
T Consensus 234 ~~l~~~~~~-~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~-~~~~g~f~~~~~~------ 304 (354)
T PRK04635 234 EILMRVIAP-YPVPLPVSEIATQALSEAGLARMKFQVLDLNAQGARLQAALSMYGGAK-V-LEGNGNYVLAKFD------ 304 (354)
T ss_pred HHHHhhcCC-CCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCce-E-CCCCCcEEEEECC------
Confidence 777654432 355667788888888654345567778889999999999999986666 4 3445789998885
Q ss_pred CCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEeccChHHHHHHHHHHHH
Q 014603 363 INSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALEDGLGRMKA 413 (422)
Q Consensus 363 ~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~l~~~~~~l~~ 413 (422)
+..++.. +++++||.+.++..++.++++|||+++ .++++++++.|++
T Consensus 305 --~~~~~~~-~l~~~gv~v~~~~~~~~~~~lRis~~~-~e~~~~l~~al~~ 351 (354)
T PRK04635 305 --DVDAVFK-ALWDAGIVARAYKDPRLANCIRFSFSN-RAETDKLIGLIRN 351 (354)
T ss_pred --CHHHHHH-HHHHCCEEEEECCCCCCCCeEEEEeCC-HHHHHHHHHHHHH
Confidence 2445544 456789999876554457899999874 5788888887754
No 98
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.3e-38 Score=295.27 Aligned_cols=317 Identities=18% Similarity=0.261 Sum_probs=246.4
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 122 (422)
++.++|+|+.|++. +++|+.+.+++.+.+.......|++. +.+++|+++++++++.. +++++|++|+|++++
T Consensus 17 ~~~~~i~l~~~~~~----~~~p~~~~~~~~~~~~~~~~~~Y~~~-~~~~Lr~aia~~~~~~~---~~~~~i~it~Ga~~~ 88 (335)
T PRK14808 17 EKRDRTYLALNENP----FPFPEDLVDEVFRRLNSDTLRIYYDS-PDEELIEKILSYLDTDF---LSKNNVSVGNGADEI 88 (335)
T ss_pred CCCceeEecCCCCC----CCCCHHHHHHHHHHhhhhhhhcCCCC-ChHHHHHHHHHHhCCCC---CCcceEEEcCCHHHH
Confidence 56789999999955 78899999999887755444457654 78999999999996532 689999999999999
Q ss_pred HHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCH
Q 014603 123 IEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTY 202 (422)
Q Consensus 123 ~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~ 202 (422)
+..+++++ |.|++++|+|..+...++..|.+++.++.+.+ +.++... + +.++++++++||||||.+++.
T Consensus 89 i~~~~~~~----d~v~v~~P~y~~~~~~~~~~g~~~~~v~~~~~--~~~~~~~----~-~~~~~i~i~nP~NPTG~~~s~ 157 (335)
T PRK14808 89 IYVMMLMF----DRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKD--LRIPEVN----V-GEGDVVFIPNPNNPTGHVFER 157 (335)
T ss_pred HHHHHHHh----CcEEECCCCHHHHHHHHHHcCCeEEEecCCCc--CCCChhH----c-cCCCEEEEeCCCCCCCCCcCH
Confidence 99999887 68999999999999999999999999987542 3333222 2 246889999999999999999
Q ss_pred HHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHH
Q 014603 203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIV 282 (422)
Q Consensus 203 ~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 282 (422)
+++++|+ +++++||+||+|..+. +....+ .+...+++++++||||+|+++|+|+||++++ ++++
T Consensus 158 ~~l~~l~----~~~~~ii~DE~Y~~f~--~~~~~~--~~~~~~~vi~~~S~SK~~~l~GlRvG~~v~~--------~~~~ 221 (335)
T PRK14808 158 EEIERIL----KTGAFVALDEAYYEFH--GESYVD--LLKKYENLAVIRTFSKAFSLAAQRIGYVVSS--------EKFI 221 (335)
T ss_pred HHHHHHH----hcCCEEEEECchhhhc--CCchHH--HHHhCCCEEEEEechhhccCcccceEEEEeC--------HHHH
Confidence 9998886 4799999999999863 222212 1223357999999999999999999999986 4688
Q ss_pred HHHHhhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccccC
Q 014603 283 DSIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEG 362 (422)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 362 (422)
+++...... .+.+.++|.++..+++. ..+..+..+.+.++++.+.+.|+++ ++. +..| .|.|+|++++..
T Consensus 222 ~~l~~~~~~-~~~~~~~q~a~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~-g~~-~~~~-~g~f~~~~l~~~---- 291 (335)
T PRK14808 222 DAYNRVRLP-FNVSYVSQMFAKVALDH--REIFEERTKFIVEERERMKSALREM-GYR-ITDS-RGNFVFIFMEKE---- 291 (335)
T ss_pred HHHHHhcCC-CCCCHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCE-ECCC-CCeEEEEeCCCc----
Confidence 888765533 45677889888888874 3466777788888899999999987 666 4344 577889988732
Q ss_pred CCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEeccChHHHHHHHHHHHH
Q 014603 363 INSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALEDGLGRMKA 413 (422)
Q Consensus 363 ~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~l~~~~~~l~~ 413 (422)
+..++... +.++||.|... .+++||+++.. ++.+++++.|++
T Consensus 292 --~~~~~~~~-l~~~Gi~V~~~-----~~~~Risi~~~-~~~~~~~~~l~~ 333 (335)
T PRK14808 292 --EKERLLEH-LRAKNIAVRSF-----REGVRITIGKR-EENDMILKELEV 333 (335)
T ss_pred --cHHHHHHH-HHHCCeEEEEC-----CCCeEEecCCH-HHHHHHHHHHHh
Confidence 34555554 56679999852 46899998864 567777776654
No 99
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.9e-38 Score=294.95 Aligned_cols=319 Identities=20% Similarity=0.320 Sum_probs=248.1
Q ss_pred CCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHH
Q 014603 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI 123 (422)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~ 123 (422)
+.+.|+|+.+.+. +++++.+.+++.+.+.......|++ .|.+++|+++++++ ++++++|++|+|+++++
T Consensus 17 ~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~-~g~~~lr~~ia~~~------~~~~~~I~~t~G~~~~l 85 (337)
T PRK03967 17 GNYRIWLDKNENP----FDLPEELKEEIFEELKRVPFNRYPH-ITSDPLREAIAEFY------GLDAENIAVGNGSDELI 85 (337)
T ss_pred CCceEEecCCCCC----CCCCHHHHHHHHHHhhcCccccCCC-CCHHHHHHHHHHHh------CcCcceEEEcCCHHHHH
Confidence 4578999999855 5778899999998876444567864 68999999999999 47889999999999999
Q ss_pred HHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHH
Q 014603 124 EVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQ 203 (422)
Q Consensus 124 ~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~ 203 (422)
..++..+ +||+|+++.|+|..+...++..|.+++.++.+ +++.+|++.+++.. ++++++++++|+||||.+++.+
T Consensus 86 ~~~~~~~--~gd~V~v~~P~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~-~~~~~v~~~~P~NPtG~~~~~~ 160 (337)
T PRK03967 86 SYLVKLF--EGKHIVITPPTFGMYSFYAKLNGIPVIDVPLK--EDFTIDGERIAEKA-KNASAVFICSPNNPTGNLQPEE 160 (337)
T ss_pred HHHHHHh--CCCeEEEeCCChHHHHHHHHHcCCeEEEeecC--CCCCcCHHHHHHhc-cCCCEEEEeCCCCCCCCCCCHH
Confidence 9988876 79999999999999888888999999999875 34679999998865 4678888999999999999987
Q ss_pred HHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHH
Q 014603 204 HLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVD 283 (422)
Q Consensus 204 ~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~ 283 (422)
++.+++ ++++++|+||+|..+. +....+ .....+++++++||||.|+++|+|+||++++ +++++
T Consensus 161 ~l~~i~----~~~~~ii~De~y~~~~--~~~~~~--~~~~~~~vi~l~S~SK~~~l~GlRiG~iv~~--------~~~i~ 224 (337)
T PRK03967 161 EILKVL----ETGKPVVLDEAYAEFS--GKSLIG--LIDEYPNLILLRTFSKAFGLAGIRAGYAIAN--------EEIID 224 (337)
T ss_pred HHHHHH----hcCCEEEEECchhhhc--ccchHH--HHhhCCCEEEEecchHhhcchhhhheeeecC--------HHHHH
Confidence 776654 3699999999998864 222111 1233457999999999999999999999986 46778
Q ss_pred HHHhhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccccCC
Q 014603 284 SIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGI 363 (422)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 363 (422)
.+...... .+.+.++|.++..+++. .++..+..+.+.++++.+.+.|.+. . .|++++|+|++++
T Consensus 225 ~~~~~~~~-~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~-----~-~~~~~~~~~~~~~------- 288 (337)
T PRK03967 225 ALYRIKPP-FSLNILTMKIVRLALDH--YDLIEERIDYIIKERERVRRELGEY-----A-YPSDANFLLLKLD------- 288 (337)
T ss_pred HHHhhcCC-CCCCHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHhccC-----c-CCCCCcEEEEhHH-------
Confidence 88776543 35678999999988874 3456666667777788888888764 1 4677899997662
Q ss_pred CCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEeccChHHHHHHHHHHHHHHHHh
Q 014603 364 NSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 364 ~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~l~~~~~~l~~~~~~~ 418 (422)
+...++ ++||.|.++.. ...+++||+++. .++.+++++.|+.+.+.|
T Consensus 289 -----~~~~l~-~~gi~v~~~~~-~~~~~~Ri~~~~-~~~~~~l~~~l~~~~~~~ 335 (337)
T PRK03967 289 -----AYDYLL-ENGIVVRKLSG-RLEGHIRVTVGK-REENDEFIKALKEIKEGY 335 (337)
T ss_pred -----HHHHHH-HCCEEEEeCCC-CCCCeEEEecCC-HHHHHHHHHHHHHHHHhc
Confidence 345554 56999987643 236799999985 345556666666665554
No 100
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=2e-38 Score=294.33 Aligned_cols=312 Identities=16% Similarity=0.211 Sum_probs=237.9
Q ss_pred CceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHH
Q 014603 46 PLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEV 125 (422)
Q Consensus 46 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~ 125 (422)
.+|+|+.+.-. ++. . ...+.|+.. ...+||+++++++ ++.+++|++|+|+++++..
T Consensus 17 ~~i~l~~Nenp----~~~-----------~--~~~~~Yp~~-~~~~lr~~ia~~~------~~~~~~I~it~Gs~~~l~~ 72 (332)
T PRK06425 17 RIIDFSANIND----FMD-----------I--GDISIYPEI-SYTDIEDQIKIYT------QGLKIKVLIGPGLTHFIYR 72 (332)
T ss_pred CEEEeccccCC----CcC-----------h--hhcccCcCc-CHHHHHHHHHHHh------CCCcceEEECCCHHHHHHH
Confidence 67999988722 210 0 124568654 4789999999999 6788999999999999999
Q ss_pred HHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHH
Q 014603 126 ILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHL 205 (422)
Q Consensus 126 ~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l 205 (422)
+++. +++| .|++++|+|..|...++..|.+++.+|++. ++.|.+.+++ .+++++++++||||||.+++.+++
T Consensus 73 ~~~~-~~~~-~vv~~~P~y~~y~~~~~~~G~~v~~vp~~~---~~~~~~~l~~---~~~k~v~l~nP~NPTG~~~s~~~~ 144 (332)
T PRK06425 73 LLSY-INVG-NIIIVEPNFNEYKGYAFTHGIRISALPFNL---INNNPEILNN---YNFDLIFIVSPDNPLGNLISRDSL 144 (332)
T ss_pred HHHH-hCCC-cEEEeCCChHHHHHHHHHcCCeEEEEeCCc---ccCcHHHHhh---cCCCEEEEeCCCCCcCCccCHHHH
Confidence 9974 5676 577779999999999999999999999753 2356555543 378899999999999999999999
Q ss_pred HHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHH
Q 014603 206 QKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSI 285 (422)
Q Consensus 206 ~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~ 285 (422)
++|+++|+++|++||+||+|..+.+++. ..........+++++++||||.|++||+|+||++++ +++++.+
T Consensus 145 ~~l~~~a~~~~~~iI~DE~Y~~~~~~~~-~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiGy~v~~--------~~li~~l 215 (332)
T PRK06425 145 LTISEICRKKGALLFIDEAFIDFVPNRA-EEDVLLNRSYGNVIIGRSLTKILGIPSLRIGYIATD--------DYNMKIS 215 (332)
T ss_pred HHHHHHHHHcCCEEEEecchhccccccc-hhHHHHhccCCCEEEEeecHHhcCCchhhheeeecC--------HHHHHHH
Confidence 9999999999999999999998876442 111222233368999999999999999999999986 4677777
Q ss_pred HhhhhhccCcchHHHHHHHHHHhhch-HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccccCCC
Q 014603 286 KSFLNISSDPATFIQGAVPQILEKTE-EEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGIN 364 (422)
Q Consensus 286 ~~~~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 364 (422)
....... ..+...+ .++.... +.++++.++.++++++.+.+.|+++ ++. ...+.+|+|+|++++
T Consensus 216 ~~~~~~~-~~~~~~~----~~l~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~-~~~~~~g~f~~~~~~-------- 280 (332)
T PRK06425 216 RKITEPW-SVCDPAI----DFIRSIDLDYVAKHSLDIMENERSYLINNLEAM-GFR-AAGDPSANFITFMIP-------- 280 (332)
T ss_pred HHcCCCC-ccCHHHH----HHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHC-CCE-ECCCCCceEEEEEcC--------
Confidence 7644322 2222222 2332222 4556778889999999999999988 666 334556889999885
Q ss_pred CHHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEeccChHHHHHHHHHHHHHH
Q 014603 365 SDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAVEPSALEDGLGRMKAFY 415 (422)
Q Consensus 365 ~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRis~~~~~~~l~~~~~~l~~~~ 415 (422)
++.++...+++ +||.|.||..|+. ++++||+++.+ ++.+++++.|++++
T Consensus 281 ~~~~~~~~l~~-~gi~v~~~~~f~~~~~~~iRis~~~~-~~~~~l~~al~~~~ 331 (332)
T PRK06425 281 DAHDFYSYLLK-NGILVRLLDDYECLGEQYIRIAIRRR-SFNIKLVNALRNFL 331 (332)
T ss_pred CHHHHHHHHHH-CCeEEEECCCCCCCCCCEEEEEeCCH-HHHHHHHHHHHHHh
Confidence 35677777755 6999999998853 47999999864 58888888887654
No 101
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=100.00 E-value=2.5e-38 Score=293.45 Aligned_cols=312 Identities=17% Similarity=0.231 Sum_probs=247.8
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 122 (422)
++++.++|+.|.+. ++++ ..+... .....|++..+ +++|+++++++ ++++++|++|+|++++
T Consensus 15 ~~~~~~~~~~~~~~----~~~~--~~~~~~-----~~~~~y~~~~~-~~lr~~la~~~------~~~~~~i~~t~G~~~~ 76 (330)
T TIGR01140 15 PPEDWLDFSTGINP----LGPP--VPPIPA-----SAWARYPDPEY-DELRAAAAAYY------GLPAASVLPVNGAQEA 76 (330)
T ss_pred ChhheeEccccCCC----CCCC--hhhcch-----HHHhhCCCccH-HHHHHHHHHHh------CCChhhEEECCCHHHH
Confidence 46778999999854 2332 222111 12347877665 99999999998 5678999999999999
Q ss_pred HHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCH
Q 014603 123 IEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTY 202 (422)
Q Consensus 123 ~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~ 202 (422)
+.++.+.+ .+| .|++++|+|..+...++..|.+++.++ |++.+++.++ +++++++++|+||||.+++.
T Consensus 77 i~~~~~~l-~~g-~vl~~~p~y~~~~~~~~~~g~~~~~~~---------d~~~l~~~~~-~~~~v~i~~p~NPtG~~~~~ 144 (330)
T TIGR01140 77 IYLLPRLL-APG-RVLVLAPTYSEYARAWRAAGHEVVELP---------DLDRLPAALE-ELDVLVLCNPNNPTGRLIPP 144 (330)
T ss_pred HHHHHHHh-CCC-eEEEeCCCcHHHHHHHHHcCCEEEEeC---------CHHHHHhhcc-cCCEEEEeCCCCCCCCCCCH
Confidence 99987664 677 799999999999999999999888775 7788888874 57789999999999999999
Q ss_pred HHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCcccc-CCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhH
Q 014603 203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF-GSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGI 281 (422)
Q Consensus 203 ~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~-~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~ 281 (422)
+++++|+++|+++|++||+||+|..+.+.. ++..+ +..+++++++|+||.|+++|+|+||++++ +++
T Consensus 145 ~~~~~l~~~a~~~~~~ii~De~y~~~~~~~----~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~--------~~~ 212 (330)
T TIGR01140 145 ETLLALAARLRARGGWLVVDEAFIDFTPDA----SLAPQAARFPGLVVLRSLTKFFGLAGLRLGFVVAH--------PAL 212 (330)
T ss_pred HHHHHHHHHhHhcCCEEEEECcccccCCcc----chhhHhccCCCEEEEEecchhhcCchhhhhheeCC--------HHH
Confidence 999999999999999999999998776431 22222 23457899999999999999999999986 467
Q ss_pred HHHHHhhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCccccc
Q 014603 282 VDSIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLE 361 (422)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 361 (422)
++.+...... .+++.++|.++..+++. ..+.++.+++++++++.+.+.|++++.+. . .|.+++|+|+.++
T Consensus 213 ~~~l~~~~~~-~~~s~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~-~~~~~~f~~~~~~----- 282 (330)
T TIGR01140 213 LARLREALGP-WTVNGPARAAGRAALAD--TAWQAATRARLAAERARLAALLARLGGLE-V-VGGTALFLLVRTP----- 282 (330)
T ss_pred HHHHHhcCCC-CCchHHHHHHHHHHHhc--hHHHHHHHHHHHHHHHHHHHHHHhCCCce-E-CCCCCeEEEEEcC-----
Confidence 7777766532 35677889999988875 45667888999999999999999986565 3 4667899999876
Q ss_pred CCCCHHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEeccChHHHHHHHHHH
Q 014603 362 GINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAVEPSALEDGLGRM 411 (422)
Q Consensus 362 ~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRis~~~~~~~l~~~~~~l 411 (422)
+..++.++++ ++||.+.||..|.. .+++||++++..++ ++++++|
T Consensus 283 ---~~~~l~~~l~-~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~-~~~~~~l 329 (330)
T TIGR01140 283 ---DAAALHEALA-RRGILIRDFDNFPGLDPRYLRFALPTDEEN-DRLEEAL 329 (330)
T ss_pred ---CHHHHHHHHH-HCCEEEEECCCCCCCCCCEEEEEecCHHHH-HHHHHhh
Confidence 3567777775 56999999998852 57999999976665 7777665
No 102
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=100.00 E-value=1.7e-37 Score=287.67 Aligned_cols=308 Identities=15% Similarity=0.161 Sum_probs=233.1
Q ss_pred CCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHH
Q 014603 45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIE 124 (422)
Q Consensus 45 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~ 124 (422)
.++|+|+.+... ..++++.+.+ ..+ ..|+.. ..+||++|++++ .+++|++|+|+++++.
T Consensus 20 ~~~i~l~~ne~p---~~~~~~~~~~---~~~-----~~yp~~--~~~Lr~~ia~~~--------~~~~I~it~Gs~~al~ 78 (330)
T PRK05664 20 ADWLDLSTGIAP---WPWPVPAIPA---DAW-----ARLPET--DDGLEAAARAYY--------GAPQLLPVAGSQAAIQ 78 (330)
T ss_pred HHheeecCCcCC---CCCCCcccCH---HHH-----HhCCCC--hHHHHHHHHHHh--------CCCCEEECcCHHHHHH
Confidence 457999999522 1122122221 111 246543 389999999998 3479999999999999
Q ss_pred HHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHH
Q 014603 125 VILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQH 204 (422)
Q Consensus 125 ~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~ 204 (422)
.+.. +.+||+|++++|+|+.+...++..|.+++.++. +.+++.++ +++++++++|+||||.+++.++
T Consensus 79 ~~~~--~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~v~~----------~~~~~~~~-~~~~v~l~nP~NPTG~~~s~~~ 145 (330)
T PRK05664 79 ALPR--LRAPGRVGVLSPCYAEHAHAWRRAGHQVRELDE----------AEVEAALD-SLDVLVVVNPNNPTGRRFDPAR 145 (330)
T ss_pred HHHH--ccCCCEEEEcCCChHHHHHHHHHcCCeEEEech----------hhHhhhhc-CCCEEEEeCCcCCCCCccCHHH
Confidence 8863 579999999999999999999999999988764 23444443 5778899999999999999999
Q ss_pred HHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHH
Q 014603 205 LQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDS 284 (422)
Q Consensus 205 l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~ 284 (422)
+++|+++|+++|++||+||+|..+. . ..++..+...+++++++||||.|++||+|+||++++ +++++.
T Consensus 146 l~~l~~~~~~~~~~iI~DE~y~~~~--~--~~s~~~~~~~~~vi~~~SfSK~~gl~GlRiG~~v~~--------~~l~~~ 213 (330)
T PRK05664 146 LLAWHARLAARGGWLVVDEAFMDNT--P--QHSLAACAHRPGLIVLRSFGKFFGLAGARLGFVLAE--------PALLRA 213 (330)
T ss_pred HHHHHHHHHhcCCEEEEECCcccCC--C--cccccccccCCCEEEEeeccccccCCCcceEEEEeC--------HHHHHH
Confidence 9999999999999999999997643 1 123444445568999999999999999999999986 468888
Q ss_pred HHhhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccccCCC
Q 014603 285 IKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGIN 364 (422)
Q Consensus 285 ~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 364 (422)
+...... ...+.+.|.++..+|++ ..+.++.+++++++++.+.+.|+++ ++. . .+..++|+|++++
T Consensus 214 ~~~~~~~-~~~~~~~~~~~~~~L~~--~~~~~~~~~~~~~~r~~l~~~L~~~-~~~-~-~~~~~~f~~~~~~-------- 279 (330)
T PRK05664 214 LAELLGP-WTVSGPTRWLAQAALAD--TPWQRRQRERLLAASQRLAALLRRH-GLT-P-AGGCALFQWVRTE-------- 279 (330)
T ss_pred HHHhcCC-CCCCHHHHHHHHHHHhC--hHHHHHHHHHHHHHHHHHHHHHHHC-CCc-c-cCCcceEEEEecC--------
Confidence 7766542 35567888899889975 3556778889999999999999987 543 2 2222377887764
Q ss_pred CHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEeccChHHHHHHHHHHHHHHH
Q 014603 365 SDMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALEDGLGRMKAFYD 416 (422)
Q Consensus 365 ~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~l~~~~~~l~~~~~ 416 (422)
++.++...+ .++||.|.+ |+..+++||+++.+.++.+++++.|+...+
T Consensus 280 ~~~~~~~~l-~~~gi~v~~---f~~~~~iRis~~~~~~~~~~l~~al~~~~~ 327 (330)
T PRK05664 280 DAAALHEFL-ARRGILTRL---FEQPASLRFGLPADEADWARLDQALLAYRK 327 (330)
T ss_pred CHHHHHHHH-HHCCeEEEE---CCCCCeEEEECCCCHHHHHHHHHHHHHHHh
Confidence 355666555 667999985 445689999999666777777777766544
No 103
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=1.5e-37 Score=288.50 Aligned_cols=310 Identities=13% Similarity=0.149 Sum_probs=239.3
Q ss_pred CCceeecCCCCCCCCCCCCc-HHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCC-CCCEEEecCHHHH
Q 014603 45 RPLIPLGHGDPSAFPSFRTA-SVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLS-PDDVYLTLGCTQA 122 (422)
Q Consensus 45 ~~~i~l~~g~~~~~~~~~~~-~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~-~~~i~~~~g~~~a 122 (422)
.++|+|+.+... +++| +.+.. .. ...|+.. . .+||+++++++ ++. +++|++|+|++++
T Consensus 24 ~~~i~ls~Nenp----~~~~~~~~~~---~~-----~~~Yp~~-~-~~L~~~ia~~~------~~~~~~~I~i~~Gs~e~ 83 (339)
T PRK06959 24 DAWLDLSTGINP----HGYPVPPVPA---DA-----WRRLPED-D-DGLAACAARYY------GAPDAAHVLPVAGSQAA 83 (339)
T ss_pred hhhceeccCCCC----CCCCCCCCCH---HH-----HHhCCCc-h-HHHHHHHHHHh------CCCCcccEEECcCHHHH
Confidence 567999999833 2333 22211 11 2358754 3 89999999998 444 5899999999999
Q ss_pred HHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCH
Q 014603 123 IEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTY 202 (422)
Q Consensus 123 ~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~ 202 (422)
+..+.. ++++|+ |+++.|+|..|...++..|.+++.++.+. +.+ .+..+++++|+||||||.+++.
T Consensus 84 i~~l~~-~~~~g~-v~v~~P~y~~y~~~~~~~g~~~~~v~~~~--------~~~----~~~~~~v~l~nPnNPTG~~~s~ 149 (339)
T PRK06959 84 IRALPA-LLPRGR-VGIAPLAYSEYAPAFARHGHRVVPLDEAA--------DTL----PAALTHLIVVNPNNPTAERLPA 149 (339)
T ss_pred HHHHHH-hcCCCe-EEEcCCCcHHHHHHHHHCCCEEEeecccc--------hhc----cccCCEEEEeCCCCCCCCCCCH
Confidence 997765 567776 88999999999999999999988776532 222 2235689999999999999999
Q ss_pred HHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHH
Q 014603 203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIV 282 (422)
Q Consensus 203 ~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 282 (422)
+++++|++.|.+++.++|+||+|..+.+. .++..+...+++++++||||.|+++|+|+||++++ ++++
T Consensus 150 ~~l~~l~~~~~~~~~~vI~DEay~~~~~~----~s~~~~~~~~~vi~l~SfSK~~gl~GlRiGy~v~~--------~~li 217 (339)
T PRK06959 150 ARLLRWHAQLAARGGTLIVDEAFADTLPA----ASLAAHTDRPGLVVLRSVGKFFGLAGVRAGFVLAA--------PALL 217 (339)
T ss_pred HHHHHHHHHHHHcCCEEEEECCCccCCCc----ccchhccCCCCEEEEecChhhcCCcchheEEEecC--------HHHH
Confidence 99999999999999999999999986532 22333323357999999999999999999999986 5788
Q ss_pred HHHHhhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccccC
Q 014603 283 DSIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEG 362 (422)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 362 (422)
+++...... ...+.+.|.++.++|++ ..+.++.+++++++++.+.+.|+++ ++. + . ..++|+|++++
T Consensus 218 ~~l~~~~~~-~~vs~~~q~a~~~~L~~--~~~~~~~~~~~~~~r~~l~~~L~~~-g~~-~-~-~~~~f~~~~~~------ 284 (339)
T PRK06959 218 AALRDALGA-WTVSGPARHAVRAAFAD--AAWQAAMRERLAADGARLAALLRAH-GFA-V-H-ATPLFSWTDDP------ 284 (339)
T ss_pred HHHHHhcCC-CCCcHHHHHHHHHHhCc--HHHHHHHHHHHHHHHHHHHHHHHHC-CCC-c-c-CcceEEEEeCC------
Confidence 888876643 35678899999999975 4677888899999999999999998 666 3 2 35788898875
Q ss_pred CCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEeccChHHHHHHHHHHHHHHHHhc
Q 014603 363 INSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALEDGLGRMKAFYDRHA 419 (422)
Q Consensus 363 ~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~l~~~~~~l~~~~~~~~ 419 (422)
+..++...+ .++||.|+. |+..+++||+++.+.++.+++++.|+++++.+.
T Consensus 285 --~~~~l~~~l-~~~GI~vr~---~~~~~~lRisi~~~~~e~~~l~~al~~~~~~~~ 335 (339)
T PRK06959 285 --RAAALHAAL-ARRGIWTRY---FAPPPSVRFGLPADEAEWQRLEDALAECVPTLA 335 (339)
T ss_pred --CHHHHHHHH-HhCCeEEEE---CCCCCeEEEECCCCHHHHHHHHHHHHHHHHHHh
Confidence 355666665 556999975 344679999997666788999999888776654
No 104
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=100.00 E-value=6.7e-38 Score=277.65 Aligned_cols=394 Identities=20% Similarity=0.309 Sum_probs=291.8
Q ss_pred CCCCcCccccHHHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHH------------------
Q 014603 8 NGNQWGFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVD------------------ 69 (422)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~------------------ 69 (422)
++...++.++..-.....++++.+.. +... .+..+|.|+.|.|.... ++......+
T Consensus 4 ~~~dys~~ls~es~srk~~p~~~~~~-~~s~----~~i~~i~lagGlPnp~~-fp~~~~s~~p~~~~~~e~~~~~~~~~~ 77 (472)
T KOG0634|consen 4 PPKDYSHHLSKESASRKLSPLRALGD-IKSA----SPISIISLAGGLPNPDY-FPIRSDSIKPQGSWKKENGKKLNNVTF 77 (472)
T ss_pred CcccHHHHhcccccccccChHHHhhh-Hhhc----CCCceEEecCCCCCCCc-ccccccccccccCccccccccccceee
Confidence 55566655554444455556666653 3332 24448999999877321 332221111
Q ss_pred HHHHHhhC-----CCCCCCCCCCCCHHHHHHHHHHHhhcCCCC-CCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCC
Q 014603 70 AIVHSVRS-----ARFNCYSSTVGILPARRAIADYLNRDLPYK-LSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPG 143 (422)
Q Consensus 70 a~~~~~~~-----~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~-~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~ 143 (422)
++.+.... ....+|++..|+++|...+.+...-..+.+ ...-+|++|+|.|.+++.+++.++.+||.|++..++
T Consensus 78 ~~~~~~~~~~l~~s~alQYg~s~G~peLl~fik~h~~~~ih~p~~~~wdiiit~G~t~~l~~~l~~~~N~gd~vlie~~t 157 (472)
T KOG0634|consen 78 AFENEASENTLPLSRALQYGQSSGIPELLLFIKDHNRPTIHAPPYKNWDIIITNGNTDGLFKVLRTLINRGDHVLIEEYT 157 (472)
T ss_pred eccccCCcccchhhhhhccccccCcHHHHHHHHHhccccccCCCCCCceEEEecCCchHHHHHHHHhhcCCCceEEeccc
Confidence 00010000 123489999999999999999654222222 233489999999999999999999999999999999
Q ss_pred ccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC---------CceEEEEeCC--CCCcccccCHHHHHHHHHHH
Q 014603 144 FPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE---------NTVALVIINP--GNPCGNVYTYQHLQKIAETA 212 (422)
Q Consensus 144 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~---------~~~~i~i~~p--~nptG~~~~~~~l~~i~~~~ 212 (422)
|.+.....+..|++++.++++. .++++|.|++.+.. +++ ++++-| +||||..++.+..++|.++|
T Consensus 158 y~~AL~s~~a~gv~~ipv~md~---~Gi~pE~l~~il~~w~~~~~k~~~p~-vlYTIPTgqNPTG~tls~errk~iy~LA 233 (472)
T KOG0634|consen 158 YPSALQSMEALGVKIIPVKMDQ---DGIDPESLEEILSNWKPGSYKKPKPH-VLYTIPTGQNPTGNTLSLERRKKIYQLA 233 (472)
T ss_pred chHHHHhccccCceEEeccccC---CCCCHHHHHHHHhcCCcccccCCCCe-EEEeCcCCCCCCCCccCHHHHHHHHHHH
Confidence 9999999999998887777643 35899999987632 233 556666 89999999999999999999
Q ss_pred HHcCcEEEEcccccccccCC---C-----C-----------CCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCC
Q 014603 213 KKLGIMVIADEVYDHLAFGN---T-----P-----------FVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPN 273 (422)
Q Consensus 213 ~~~~~~li~D~~~~~~~~~~---~-----~-----------~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~ 273 (422)
++|+++||.||.|..+.++. . + ..++..++.+.+|+-..||||. .+||+|+||+.+++
T Consensus 234 rKyDfLIVeDdpYy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKi-iaPGlRlG~it~~~-- 310 (472)
T KOG0634|consen 234 RKYDFLIVEDDPYYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKI-IAPGLRLGWITGNS-- 310 (472)
T ss_pred HHcCEEEEecCccceeeccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhh-hcCcceeEEeecCH--
Confidence 99999999999999888762 1 1 2234456778899999999999 69999999999863
Q ss_pred CcccchhHHHHHHhhh-hhccCcchHHHHHHHHHHhhchH----HHHHHHHHHHHHHHHHHHHHhhc-CCCC-CCCCCCC
Q 014603 274 GILQDSGIVDSIKSFL-NISSDPATFIQGAVPQILEKTEE----EFFSKITDILRETADICCDRLKE-IPCI-TCPKKPE 346 (422)
Q Consensus 274 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~~~~l~~~L~~-~~~~-~~~~~~~ 346 (422)
.+++++-... ..+.+|+.+.|..+.+.|+...+ .|+.+++..+..++..+..+|.+ +|.- ..+..|.
T Consensus 311 ------~~l~ril~~ae~~t~~pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~P~ 384 (472)
T KOG0634|consen 311 ------LFLKRILDLAEVATSGPSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHPPK 384 (472)
T ss_pred ------HHHHHHhhhcceeecCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEecCC
Confidence 4555555444 34557889999999999887554 67888888999999999999988 4553 3366899
Q ss_pred CceEEEEecCccccc---CCCCHHHHHHHHHHhcCeEEecCCCCCC------CC-eEEEEec-cChHHHHHHHHHHHHHH
Q 014603 347 GSMFVMVKLNYSLLE---GINSDMEFALKLAKEESVIVLPGITVGL------KD-WLRITFA-VEPSALEDGLGRMKAFY 415 (422)
Q Consensus 347 ~g~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~gi~v~~g~~~~~------~~-~iRis~~-~~~~~l~~~~~~l~~~~ 415 (422)
+|+|+|++++-..+. ...+..++....+.++||.+.+|..|.. .. ++|++++ .+.++++++++++..++
T Consensus 385 aGmFiwv~i~~~~~~~~~~i~q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s~~kiffRls~a~a~~e~l~~g~~rf~~~i 464 (472)
T KOG0634|consen 385 AGMFIWVEIPYINFDTKKSINQIEEIIFIKAVKNGVKLVCGSWFMVDPESSWSKIFFRLSIAFAEPEKLDEGIERFGSVI 464 (472)
T ss_pred cceEEEEEecccccccccchHHHHHHHHHHHHHCCeEEecCceeEEcCccCCCcceEEEEeecCCHHHHHHHHHHHHHHH
Confidence 999999999722111 1113556677778889999999999854 23 8999999 78899999999999999
Q ss_pred HHhcc
Q 014603 416 DRHAK 420 (422)
Q Consensus 416 ~~~~~ 420 (422)
+++.+
T Consensus 465 ke~f~ 469 (472)
T KOG0634|consen 465 KEHFI 469 (472)
T ss_pred HHHhh
Confidence 88743
No 105
>PRK08354 putative aminotransferase; Provisional
Probab=100.00 E-value=7.8e-37 Score=281.02 Aligned_cols=301 Identities=16% Similarity=0.243 Sum_probs=220.8
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 122 (422)
+..++|+|+.+... ++ |+.+.+++.+.... ...|+. ...+|++++++++ ++|++|+|++++
T Consensus 6 ~~~~~i~l~~~~np----~~-p~~~~~a~~~~~~~--~~~yp~---~~~l~~~ia~~~~---------~~I~vt~G~~~a 66 (311)
T PRK08354 6 REEGLIDFSASVNP----YP-PEWLDEMFERAKEI--SGRYTY---YEWLEEEFSKLFG---------EPIVITAGITEA 66 (311)
T ss_pred CccceeEecCCCCC----CC-CHHHHHHHHHHHHH--hhcCCC---hHHHHHHHHHHHC---------CCEEECCCHHHH
Confidence 45678999998633 33 47888888876543 346753 4789999999882 479999999999
Q ss_pred HHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCH
Q 014603 123 IEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTY 202 (422)
Q Consensus 123 ~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~ 202 (422)
+..++..+ .+||+|++++|+|..+...++..|.+++.++ +|++.+++.++ +++++++++|+||||.+++.
T Consensus 67 l~~~~~~~-~~gd~vlv~~P~y~~~~~~~~~~g~~~~~~~--------~d~~~l~~~~~-~~~~vi~~~P~NPTG~~~~~ 136 (311)
T PRK08354 67 LYLIGILA-LRDRKVIIPRHTYGEYERVARFFAARIIKGP--------NDPEKLEELVE-RNSVVFFCNPNNPDGKFYNF 136 (311)
T ss_pred HHHHHHhh-CCCCeEEEeCCCcHHHHHHHHHcCCEEeecC--------CCHHHHHHhhc-CCCEEEEecCCCCCCCccCH
Confidence 99888654 4899999999999999999999999886543 57888888776 46789999999999999999
Q ss_pred HHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHH
Q 014603 203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIV 282 (422)
Q Consensus 203 ~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 282 (422)
+++++|+++|+++|+++|+||+|..+.+++.. . ..+++++++||||+|++||+|+||+++ +.
T Consensus 137 ~~l~~l~~~a~~~~~~li~De~y~~f~~~~~~---~----~~~~vi~~~S~SK~~~l~GlRiG~~v~-----------~~ 198 (311)
T PRK08354 137 KELKPLLDAVEDRNALLILDEAFIDFVKKPES---P----EGENIIKLRTFTKSYGLPGIRVGYVKG-----------FE 198 (311)
T ss_pred HHHHHHHHHhhhcCcEEEEeCcchhccccccc---c----CCCcEEEEeccHhhcCCccceeeeeee-----------hH
Confidence 99999999999999999999999998775421 1 145789999999999999999999997 23
Q ss_pred HHHHhhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccccC
Q 014603 283 DSIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEG 362 (422)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 362 (422)
+.++..... ...+...+.++..+++. ...++.+.++.+.+.++.+.+.+ ...|. +.|+++.++
T Consensus 199 ~~l~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~l--------~~~~~-~~~~~~~~~------ 261 (311)
T PRK08354 199 EAFRSVRMP-WSIGSTGYAFLEFLIED-DFEHLRKTMPLIWREKERFEKAL--------YVKSD-ANFFIKDVG------ 261 (311)
T ss_pred HHHHHcCCC-ccCCHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHHHHhc--------CCCCC-CcEEEEECC------
Confidence 444444322 23444556666555552 22344444444444444443322 11345 445556553
Q ss_pred CCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEeccC--hHHHHHHHHH
Q 014603 363 INSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAVE--PSALEDGLGR 410 (422)
Q Consensus 363 ~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~--~~~l~~~~~~ 410 (422)
++.++...+ .++||.|.||..|+.++++||+++.+ .+++..+++.
T Consensus 262 --~~~~~~~~l-~~~gv~v~~g~~f~~~~~iRi~~~~~~~~~~l~~al~~ 308 (311)
T PRK08354 262 --DAEKFVEFL-KRNGILVRDCTSFGLPGYIRFSVRDREENEKLIRALRE 308 (311)
T ss_pred --CHHHHHHHH-HHCCeEEEecccCCCCCeEEEEeCCHHHHHHHHHHHHH
Confidence 356666665 56799999999998789999999853 3455555444
No 106
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=100.00 E-value=6e-36 Score=281.29 Aligned_cols=346 Identities=31% Similarity=0.535 Sum_probs=276.4
Q ss_pred eeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHH
Q 014603 48 IPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVIL 127 (422)
Q Consensus 48 i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~ 127 (422)
|||+.|++. +..++.+..++.+.........|.+..+..++++.++++++...+....++++++++|+++++..++
T Consensus 1 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~ 76 (350)
T cd00609 1 IDLSIGEPD----FPPPPEVLEALAAAALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLL 76 (350)
T ss_pred CCCCCCCCC----CCCCHHHHHHHHHHhhccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHH
Confidence 578888855 4566677676665222334457888899999999999999986665566789999999999999999
Q ss_pred HHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHH
Q 014603 128 TVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQK 207 (422)
Q Consensus 128 ~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~ 207 (422)
.++.++||+|+++.++|+++...++..|..++.++.+.......+.+.++....++++++++++|+||||..+|.+++++
T Consensus 77 ~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~tG~~~~~~~l~~ 156 (350)
T cd00609 77 RALLNPGDEVLVPDPTYPGYEAAARLAGAEVVPVPLDEEGGFLLDLELLEAAKTPKTKLLYLNNPNNPTGAVLSEEELEE 156 (350)
T ss_pred HHhCCCCCEEEEcCCCchhHHHHHHHCCCEEEEEecccccCCccCHHHHHhhcCccceEEEEECCCCCCCcccCHHHHHH
Confidence 99999999999999999999999999999999999865443322225666666778999999999999999999999999
Q ss_pred HHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHh
Q 014603 208 IAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKS 287 (422)
Q Consensus 208 i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~ 287 (422)
|+++|+++|+++|+|++|+.+.+.+.........+..+.+++++|++|.++.+|+|+|++++++ +++.+.++.
T Consensus 157 l~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~-------~~~~~~~~~ 229 (350)
T cd00609 157 LAELAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPP-------EELLERLKK 229 (350)
T ss_pred HHHHHHhCCeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCcccceEEEecCH-------HHHHHHHHH
Confidence 9999999999999999999877655433212223333457999999999887999999999863 257777776
Q ss_pred hhhh-ccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccccCCCCH
Q 014603 288 FLNI-SSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSD 366 (422)
Q Consensus 288 ~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 366 (422)
.... +.+++...+.++..+++... .+.++.++++.++++++.+.|++++... ...+..++++|+.++.. ..
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~~g~~~~~~~~~~------~~ 301 (350)
T cd00609 230 LLPYTTSGPSTLSQAAAAAALDDGE-EHLEELRERYRRRRDALLEALKELGPLV-VVKPSGGFFLWLDLPEG------DD 301 (350)
T ss_pred HHHhcccCCChHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHHHhcCCcc-ccCCCccEEEEEecCCC------Ch
Confidence 6543 35778888999888888643 6788888999999999999999985544 23667789999988643 24
Q ss_pred HHHHHHHHHhcCeEEecCCCCC--CCCeEEEEeccChHHHHHHHHHHH
Q 014603 367 MEFALKLAKEESVIVLPGITVG--LKDWLRITFAVEPSALEDGLGRMK 412 (422)
Q Consensus 367 ~~~~~~l~~~~gi~v~~g~~~~--~~~~iRis~~~~~~~l~~~~~~l~ 412 (422)
.+.+.++++++||.+.++..|. ...++||+++...+++++++++|+
T Consensus 302 ~~~~~~~l~~~gi~i~~~~~~~~~~~~~iRi~~~~~~~~i~~~~~al~ 349 (350)
T cd00609 302 EEFLERLLLEAGVVVRPGSAFGEGGEGFVRLSFATPEEELEEALERLA 349 (350)
T ss_pred HHHHHHHHHhCCEEEecccccccCCCCeEEEEeeCCHHHHHHHHHHhh
Confidence 5566777788899999988776 578999999955999999999875
No 107
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-33 Score=238.62 Aligned_cols=367 Identities=24% Similarity=0.376 Sum_probs=263.9
Q ss_pred ccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHH----HHhhCC----CCCCCCCCCCCHHHHHHHH
Q 014603 26 ITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIV----HSVRSA----RFNCYSSTVGILPARRAIA 97 (422)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~----~~~~~~----~~~~y~~~~g~~~lr~~ia 97 (422)
+.|+.+++.+...+ ..+..|.|+.|.|... |++.+..+ +-+..+ ....|..++|...|-++++
T Consensus 14 sGi~~lMdDl~d~L---rt~g~imLggGNPa~i------Pem~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala 84 (417)
T COG3977 14 SGITQLMDDLNDGL---RTPGAIMLGGGNPARI------PEMDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALA 84 (417)
T ss_pred hhHHHHHHHHHhhc---cCCCceeeCCCCcccC------hhHHHHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHHH
Confidence 35777777777666 3455999999997642 44444433 333322 3458998999999999999
Q ss_pred HHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcC---CC--CEEEec-CCCccchHHHHhhCCCeEEE---eeccCCC-
Q 014603 98 DYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLAR---PG--ANILLP-RPGFPYYEARATHSHLEVRH---FDLLPAK- 167 (422)
Q Consensus 98 ~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~---~g--d~Vl~~-~~~~~~~~~~~~~~g~~~~~---~~~~~~~- 167 (422)
.++++.+|+++.+++|.+|+|++.+.+.++..+.. .| .+|+.+ .|.|-+|..+...-..-+.. +.+.+.+
T Consensus 85 ~~l~~~ygwnit~~NIalTnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~~d~fVs~kP~iel~~~g~ 164 (417)
T COG3977 85 KMLRREYGWNITAQNIALTNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGLEEDLFVSAKPNIELLPAGQ 164 (417)
T ss_pred HHHHHHhCCCCccceeeecCCccchHHHHHHHhcCccCCCcceeEeeccChhhccccccccCccceeeccCCcccccccc
Confidence 99999999999999999999999999999887742 34 356665 89998886543322211111 1122222
Q ss_pred -CcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCC
Q 014603 168 -GWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP 246 (422)
Q Consensus 168 -~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~ 246 (422)
.|.+|.+.+. +.+.+.+++++-|.||||.+++.+++.+|..++++||+.+|+|.+|+.- |-+-.+.++.. .-.++
T Consensus 165 FKY~vDF~~l~--i~e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~P-FP~iifsd~~~-~w~~N 240 (417)
T COG3977 165 FKYHVDFEHLH--IGESTGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVP-FPGIIFSDATP-LWNEN 240 (417)
T ss_pred eeeccCHHHcc--cccccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCC-CCceecccccc-cCCCC
Confidence 2556766654 3457888999999999999999999999999999999999999999741 22222222221 23467
Q ss_pred eEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhh-hccCcchHHHHHHHHHHhhchHHHH-HH-HHHHHH
Q 014603 247 VLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQGAVPQILEKTEEEFF-SK-ITDILR 323 (422)
Q Consensus 247 ~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~-~~-~~~~~~ 323 (422)
++.+.|+||. |+||.|+|.++++ ++++..+..... .+..|....++.+..+++...-..+ ++ ++.-++
T Consensus 241 iilC~SLSK~-GLPG~R~GIiIan--------e~viqaitnmn~iisLap~~~G~Aia~~mie~gdl~rlseqVIrPFY~ 311 (417)
T COG3977 241 IILCMSLSKL-GLPGSRCGIIIAN--------EKVIQAITNMNGIISLAPGRMGPAIAAEMIESGDLLRLSEQVIRPFYR 311 (417)
T ss_pred EEEEeehhhc-CCCCcceeEEEcc--------HHHHHHHHhccceeeecCCCccHHHHHHHhhcchHHHHHHHhhhHHHH
Confidence 9999999999 9999999999985 577777766553 2346777888888888887541111 22 223455
Q ss_pred HHHHHHHHHhhc-CCC--CCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC---------CC
Q 014603 324 ETADICCDRLKE-IPC--ITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL---------KD 391 (422)
Q Consensus 324 ~~~~~l~~~L~~-~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~---------~~ 391 (422)
++.+...+.|+. +|. +. .+.|+++.|+|+-+.+... +..++..+| ++.||++.||+.|-. ..
T Consensus 312 ~~~q~~~~~l~~~lp~~~~~-iHkpEGAIFlWLWf~dLPI----tt~~LYq~L-Ka~Gvl~VPG~~FFpGl~~ewpH~hq 385 (417)
T COG3977 312 NRVQTTIAILRRYLPEYRCL-IHKPEGAIFLWLWFKDLPI----TTEELYQRL-KARGVLMVPGHYFFPGLDKEWPHTHQ 385 (417)
T ss_pred HHHHHHHHHHHHhcCcccee-eecCCcceeehhhhccCCC----CHHHHHHHH-HhCeEEEecccccCCCCCCCCCCccc
Confidence 555555555554 333 33 4589999999997765321 566776665 777999999998753 47
Q ss_pred eEEEEeccChHHHHHHHHHHHHHHHHhcc
Q 014603 392 WLRITFAVEPSALEDGLGRMKAFYDRHAK 420 (422)
Q Consensus 392 ~iRis~~~~~~~l~~~~~~l~~~~~~~~~ 420 (422)
++|+++..+++++++++.+|.+.+++.-+
T Consensus 386 C~Rmn~~~~~~~ie~Gva~lae~ve~~yq 414 (417)
T COG3977 386 CMRMNYVPEPEKIEKGVAILAEEVERAYQ 414 (417)
T ss_pred eEEEecCCCHHHHHHHHHHHHHHHHHHHh
Confidence 89999999999999999999999877543
No 108
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=100.00 E-value=1.7e-33 Score=268.78 Aligned_cols=333 Identities=16% Similarity=0.157 Sum_probs=248.8
Q ss_pred CCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCC-CCCC-------CCCCHHHHHHHHHHHhhcCCCCC-CCCCEEE
Q 014603 45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFN-CYSS-------TVGILPARRAIADYLNRDLPYKL-SPDDVYL 115 (422)
Q Consensus 45 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~-~y~~-------~~g~~~lr~~ia~~l~~~~~~~~-~~~~i~~ 115 (422)
.+.++|+++..+ ++|+.+.+++.+.+.....+ .... ...++++|+.+++++ ++ ++++|++
T Consensus 18 ~~~~yld~a~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~~i~~ 86 (401)
T PRK10874 18 DAGVYLDSAATA-----LKPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLL------NAPDAKNIVW 86 (401)
T ss_pred CceEEEeCCccc-----CCCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHc------CCCCCCEEEE
Confidence 457999999865 56788999998888642111 0000 123668888899988 44 6789999
Q ss_pred ecCHHHHHHHHHHHh----cCCCCEEEecCCCccc----hHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEE
Q 014603 116 TLGCTQAIEVILTVL----ARPGANILLPRPGFPY----YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVAL 187 (422)
Q Consensus 116 ~~g~~~a~~~~~~~l----~~~gd~Vl~~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i 187 (422)
|+|+|++++.+++++ .++||+|++++++|++ +...++..|.+++.++.+. ++.+|++++++.++++++++
T Consensus 87 ~~~~t~~i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~i~~~t~lv 164 (401)
T PRK10874 87 TRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGA--DRLPDVDLLPELITPRTRIL 164 (401)
T ss_pred ECCHHHHHHHHHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEecCC--CCcCCHHHHHHhcCcCcEEE
Confidence 999999999999997 3789999999999864 4566678899999998753 45689999999998899999
Q ss_pred EEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEE
Q 014603 188 VIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWL 267 (422)
Q Consensus 188 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~ 267 (422)
++++|+||||.+++ +++|.++|+++|+++|+|++|+... ...++..++.+ +++.|++|.++.+| +|++
T Consensus 165 ~i~~~~n~tG~~~~---~~~i~~l~~~~g~~~ivD~a~~~g~----~~~~~~~~~~d---~~~~s~~K~~gp~G--~G~l 232 (401)
T PRK10874 165 ALGQMSNVTGGCPD---LARAITLAHQAGMVVMVDGAQGAVH----FPADVQALDID---FYAFSGHKLYGPTG--IGVL 232 (401)
T ss_pred EEeCCcccccCcCC---HHHHHHHHHHcCCEEEEECCccccc----ccCCchhcCCC---EEEEecccccCCCc--cEEE
Confidence 99999999999965 6788888899999999999997522 22333334333 88899999887777 6888
Q ss_pred EeeCCCCcccchhHHHHHHhhh----------------------hhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHH
Q 014603 268 VTSDPNGILQDSGIVDSIKSFL----------------------NISSDPATFIQGAVPQILEKTEEEFFSKITDILRET 325 (422)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 325 (422)
+++ +++++.+.... ...++++...+.++.++++...+....+..++.+++
T Consensus 233 ~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~~~~~~~l 304 (401)
T PRK10874 233 YGK--------SELLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQAESWSRSL 304 (401)
T ss_pred EEc--------hHHHhcCCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 875 34444443211 112466667777777777654445566678888899
Q ss_pred HHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCC--------CCCeEEEEe
Q 014603 326 ADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVG--------LKDWLRITF 397 (422)
Q Consensus 326 ~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~--------~~~~iRis~ 397 (422)
++++.+.|+++|++.+. .+..+.++++.++.. +..++...| .++||.+.+|..|. ..+++|||+
T Consensus 305 ~~~l~~~l~~~~g~~~~-~~~~~~i~~~~~~~~------~~~~~~~~L-~~~gI~v~~g~~~~~~~~~~~g~~~~iRiS~ 376 (401)
T PRK10874 305 ATLAEDALAKLPGFRSF-RCQDSSLLAFDFAGV------HHSDLVTLL-AEYGIALRAGQHCAQPLLAALGVTGTLRASF 376 (401)
T ss_pred HHHHHHHHhcCCCEEEe-CCCCCcEEEEEECCc------CHHHHHHHH-HHCCcEEeccccchHHHHHHhCCCCEEEEEe
Confidence 99999999998887744 333344555566431 455666554 66799999988663 358999999
Q ss_pred c--cChHHHHHHHHHHHHHHHHh
Q 014603 398 A--VEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 398 ~--~~~~~l~~~~~~l~~~~~~~ 418 (422)
+ ++++|++++++.|+++++.+
T Consensus 377 ~~~nt~edid~ll~al~~~~~~~ 399 (401)
T PRK10874 377 APYNTQSDVDALVNAVDRALELL 399 (401)
T ss_pred cccCCHHHHHHHHHHHHHHHHHh
Confidence 8 78999999999999988764
No 109
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=100.00 E-value=3.6e-33 Score=266.24 Aligned_cols=333 Identities=16% Similarity=0.168 Sum_probs=248.0
Q ss_pred CCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCC-CCCCC-------CCCHHHHHHHHHHHhhcCCCCC-CCCCEEE
Q 014603 45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFN-CYSST-------VGILPARRAIADYLNRDLPYKL-SPDDVYL 115 (422)
Q Consensus 45 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~-~y~~~-------~g~~~lr~~ia~~l~~~~~~~~-~~~~i~~ 115 (422)
++.|+|+++..+ ++|+.+.+++.+.+.....+ .+... ..++++|+.++++++ . ++++|++
T Consensus 15 ~~~iyld~a~~~-----~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g------~~~~~~i~~ 83 (398)
T TIGR03392 15 DGTVYLDSAATA-----LKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLN------APDAENIVW 83 (398)
T ss_pred CCeEEeeCcccc-----CCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhC------CCCCCeEEE
Confidence 468999999865 56789999998887532111 12221 235678999999984 4 4689999
Q ss_pred ecCHHHHHHHHHHHh----cCCCCEEEecCCCccc----hHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEE
Q 014603 116 TLGCTQAIEVILTVL----ARPGANILLPRPGFPY----YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVAL 187 (422)
Q Consensus 116 ~~g~~~a~~~~~~~l----~~~gd~Vl~~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i 187 (422)
|+|+|++++.++.++ +++||+|++++++|++ +...++..|.+++.++.+. ++.+|++.+++.++++++++
T Consensus 84 t~g~t~~l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~~~~~~~~l~~~i~~~t~lv 161 (398)
T TIGR03392 84 TRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGA--DLLPDIRQLPELLTPRTRIL 161 (398)
T ss_pred eCChHHHHHHHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecCC--CCCcCHHHHHHHhccCceEE
Confidence 999999999999987 4789999999999865 4556678899999998753 35689999999998899999
Q ss_pred EEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEE
Q 014603 188 VIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWL 267 (422)
Q Consensus 188 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~ 267 (422)
++++|+||||.+++ +++|.++|+++|+++|+|++|+... ...++...+.+ +++.|++|.++.+| +|++
T Consensus 162 ~i~~~~n~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~~~----~~~~~~~~~~d---~~~~s~~K~~gp~G--~G~l 229 (398)
T TIGR03392 162 ALGQMSNVTGGCPD---LARAITLAHQYGAVVVVDGAQGVVH----GPPDVQALDID---FYAFSGHKLYGPTG--IGVL 229 (398)
T ss_pred EEECccccccccCC---HHHHHHHHHHcCCEEEEEhhhhcCC----CCCChhhcCCC---EEEEecccccCCCc--eEEE
Confidence 99999999999965 6778888999999999999997532 22233333333 77889999877666 8999
Q ss_pred EeeCCCCcccchhHHHHHHhhh----------------------hhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHH
Q 014603 268 VTSDPNGILQDSGIVDSIKSFL----------------------NISSDPATFIQGAVPQILEKTEEEFFSKITDILRET 325 (422)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 325 (422)
+.+ +++++++.... ...++++.....++.++++...+..+++..++.+++
T Consensus 230 ~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~~~~~~l 301 (398)
T TIGR03392 230 YGK--------TELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEAWSVSL 301 (398)
T ss_pred EEc--------HHHHhhCCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 876 34444443211 112466666777777777654445566778888999
Q ss_pred HHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCC--------CCCeEEEEe
Q 014603 326 ADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVG--------LKDWLRITF 397 (422)
Q Consensus 326 ~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~--------~~~~iRis~ 397 (422)
++++.+.|++++++.+...+. ..++++.++.. +..++...| .++||.+.+|..|. ..+++|+|+
T Consensus 302 ~~~l~~~l~~l~g~~~~~~~~-~~i~~~~~~~~------~~~~l~~~L-~~~gI~v~~g~~~~~~~~~~~g~~~~iRvS~ 373 (398)
T TIGR03392 302 ADLAEERLAQLPGFRSFRCPG-SSLLAFDFAGV------HHSDLAALL-AESGIALRAGQHCAQPLMAALGVSGTLRASF 373 (398)
T ss_pred HHHHHHHHhcCCCeEEeCCCC-CcEEEEEeCCc------CHHHHHHHH-HhCCEEEecCccchHHHHHHhCCCCEEEEEe
Confidence 999999999988876332333 44555555431 456666665 66799999998663 357999999
Q ss_pred c--cChHHHHHHHHHHHHHHHHh
Q 014603 398 A--VEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 398 ~--~~~~~l~~~~~~l~~~~~~~ 418 (422)
+ ++++|++++++.|+++++++
T Consensus 374 ~~~~t~~ei~~l~~~l~~~~~~~ 396 (398)
T TIGR03392 374 APYNTQQDVDALVDAVGAALELL 396 (398)
T ss_pred eccCCHHHHHHHHHHHHHHHHHh
Confidence 8 78999999999999988764
No 110
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=100.00 E-value=1.4e-33 Score=269.40 Aligned_cols=367 Identities=18% Similarity=0.128 Sum_probs=261.9
Q ss_pred HHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcH---HHHHHHHHHhhCCCCCCCCCCCCCHHHHHH
Q 014603 19 ELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTAS---VAVDAIVHSVRSARFNCYSSTVGILPARRA 95 (422)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~---~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ 95 (422)
|+....++.+..+.++..+. +.++.++++|.+|+|. ..+++++ .+.+++.+.+..+ ...|.+..+.++||++
T Consensus 12 r~~~v~~~~~~~~~~~~~~l--~~~g~~~~~L~~g~p~--~D~~tds~t~a~~~a~~~a~~~g-~~~Y~~~~g~~~Lrea 86 (460)
T PRK13238 12 RIKMVEPIRLTTREERERAL--AEAGYNPFLLKSEDVF--IDLLTDSGTGAMSDRQWAAMMRG-DEAYAGSRSYYRLEDA 86 (460)
T ss_pred eeceeccccccCHHHHHHHH--HHcCCCEEeCCCCCCC--CCCCCCCCchhhhHHHHHHHHhC-CcccCCCCCHHHHHHH
Confidence 34455555555555444332 1258899999999984 1245544 5777777777654 3589999999999999
Q ss_pred HHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCC------CCc
Q 014603 96 IADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPA------KGW 169 (422)
Q Consensus 96 ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~------~~~ 169 (422)
++++++ .+++++|+|+++|+.+++.+++++|| |++++|.|..+.......|.+++.+++++. ++|
T Consensus 87 ia~~~~--------~~~vv~t~ggt~A~~~~~~all~pGD-Vii~~p~~~~~~~~i~~~G~~~v~v~~~~~~~~~~~~~f 157 (460)
T PRK13238 87 VKDIFG--------YPYTIPTHQGRAAEQILFPVLIKKGD-VVPSNYHFDTTRAHIELNGATAVDLVIDEALDTGSRHPF 157 (460)
T ss_pred HHHHhC--------CCcEEECCCHHHHHHHHHHHhCCCCC-EEccCCcccchHHHHHHcCCEEEEEeccccccccccccc
Confidence 999993 35799999999999999999999999 999999999998888999999999988542 234
Q ss_pred c--cCHHHHHHhhcC----CceEEEEeCCCCCcc-cccCHHHHHHHHHHHHHcCcEEEEcccccc--cccCC-----CCC
Q 014603 170 E--VDLDAVEALADE----NTVALVIINPGNPCG-NVYTYQHLQKIAETAKKLGIMVIADEVYDH--LAFGN-----TPF 235 (422)
Q Consensus 170 ~--~d~~~l~~~~~~----~~~~i~i~~p~nptG-~~~~~~~l~~i~~~~~~~~~~li~D~~~~~--~~~~~-----~~~ 235 (422)
. +|++.|++.+++ +++++++++|+||+| .+++.+++++|.++|++||++||+|+++.. ..|.. ...
T Consensus 158 ~g~id~e~Le~~i~~~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~ 237 (460)
T PRK13238 158 KGNFDLEKLEALIEEVGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKD 237 (460)
T ss_pred cCCcCHHHHHHHHhhcCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccC
Confidence 4 999999999873 689999999999997 899999999999999999999999997742 22211 111
Q ss_pred CCccccC----CCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhh-----h-hccCcchHHHHHHHH
Q 014603 236 VPMGVFG----SIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL-----N-ISSDPATFIQGAVPQ 305 (422)
Q Consensus 236 ~~~~~~~----~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~a~~~ 305 (422)
.++..+. ... -++..|..|...++ . .|++++++ +++.++++... . ..++.+...|.|+..
T Consensus 238 ~si~~i~~~~~s~~-D~~~~Sg~K~g~~~-~-GG~i~~~d-------~~l~~~~~~~~~~~~g~~t~~g~~~~~~~Ala~ 307 (460)
T PRK13238 238 KSIKEIAREMFSYA-DGLTMSAKKDAMVN-I-GGLLCFRD-------EDLFTECRTLCILYEGFPTYGGLAGRDMEALAV 307 (460)
T ss_pred CCHHHHhhhhcccC-cEEEEecccCCCCc-c-eeEEEcCh-------HHHHHHhhhcccccCCcccccCcHHHHHHHHHh
Confidence 1221110 000 13334455542222 1 25666653 46777776653 1 122334455777777
Q ss_pred HHhhc-hHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCccc--cc--CCCCHHHHHHHHHHhcCeE
Q 014603 306 ILEKT-EEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSL--LE--GINSDMEFALKLAKEESVI 380 (422)
Q Consensus 306 ~l~~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~--~~--~~~~~~~~~~~l~~~~gi~ 380 (422)
.|.+. .+.++..+ .+++++|.+.|++. |+. +..|.+|+++++.+.... .+ +. .+.+++.+|+++.||.
T Consensus 308 ~l~e~~~~~~~~~~----~~~~~~l~~~L~~~-G~~-~~~p~Gg~~v~~d~~~~~~~~~~~~~-~~~~~a~~L~~e~GV~ 380 (460)
T PRK13238 308 GLYEGMDEDYLAYR----IGQVEYLGEGLEEA-GVP-IQTPAGGHAVFVDAGKFLPHIPAEQF-PAQALACELYLEAGIR 380 (460)
T ss_pred hHHHhhChHHHHHH----HHHHHHHHHHHHHC-CCC-eEccCCceEEEEEchhcCCCCCCCCC-chHHHHHHHHHHcCee
Confidence 77642 23444443 33568888999887 888 448999999998875320 00 11 3577899999999999
Q ss_pred EecCCCCCC-------------CCeEEEEecc---ChHHHHHHHHHHHHHHH
Q 014603 381 VLPGITVGL-------------KDWLRITFAV---EPSALEDGLGRMKAFYD 416 (422)
Q Consensus 381 v~~g~~~~~-------------~~~iRis~~~---~~~~l~~~~~~l~~~~~ 416 (422)
+.|++.|.. .+.+|++++. +.+.++.+.++|+...+
T Consensus 381 ~~~~~~f~~~~~~~~~~~~~~~~~~~Rla~~rr~~~~~~~~~~~~~l~~~~~ 432 (460)
T PRK13238 381 GVEIGSLLLGRDPKTGEQLPAPAELLRLAIPRRVYTQSHMDYVAEALKAVKE 432 (460)
T ss_pred eecccceecccCCCCccccCCccceEEEecccccCCHHHHHHHHHHHHHHHH
Confidence 999886642 3689999984 89999999999998663
No 111
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.3e-32 Score=255.54 Aligned_cols=345 Identities=22% Similarity=0.263 Sum_probs=272.2
Q ss_pred HHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCC----CCCC----CCCCHHHHHHHHHH
Q 014603 28 VRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFN----CYSS----TVGILPARRAIADY 99 (422)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~----~y~~----~~g~~~lr~~ia~~ 99 (422)
+|..++.+.+.. +.++++|++...+ +.|..+.+++.+.+.....+ .|.. ...+++.|++++++
T Consensus 8 ~r~~fp~l~~~~----~~~~vylD~aa~~-----~~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~ 78 (405)
T COG0520 8 VRADFPALKREV----GKPLVYLDNAATS-----QKPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARF 78 (405)
T ss_pred HHhhCHHHhhcc----CCCeEEecCcccc-----cCCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHH
Confidence 667776665543 6788999998865 47789999999887532111 1111 12467889999999
Q ss_pred HhhcCCCCCC-CCCEEEecCHHHHHHHHHHHh---cCCCCEEEecCCCccc----hHHHHhhCCCeEEEeeccCCCCccc
Q 014603 100 LNRDLPYKLS-PDDVYLTLGCTQAIEVILTVL---ARPGANILLPRPGFPY----YEARATHSHLEVRHFDLLPAKGWEV 171 (422)
Q Consensus 100 l~~~~~~~~~-~~~i~~~~g~~~a~~~~~~~l---~~~gd~Vl~~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~ 171 (422)
++ .+ .++|+||+|+|++++.+..++ .++||+|++..-.|++ |...++..|++++.+|++ +++.+
T Consensus 79 ~~------a~~~~eIvft~~tT~aln~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~--~~g~~ 150 (405)
T COG0520 79 LN------ADSSDEIVFTRGTTEALNLVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLD--DDGLL 150 (405)
T ss_pred hC------CCCCCeEEEeCChhHHHHHHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecC--CCCCc
Confidence 94 46 489999999999999999998 6899999999999964 566777779999999986 44568
Q ss_pred CHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEe
Q 014603 172 DLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLG 251 (422)
Q Consensus 172 d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~ 251 (422)
+.+.++..++++|+++.+++.+|.||++ .++++|+++|+++|+++++|.+|+. ++.+.++..++.| ++++
T Consensus 151 ~~~~~~~~i~~~Tklvais~vSn~tG~~---~pv~~I~~la~~~ga~v~VDaaq~~----~h~~idv~~l~~D---f~af 220 (405)
T COG0520 151 DLDALEKLITPKTKLVALSHVSNVTGTV---NPVKEIAELAHEHGALVLVDAAQAA----GHLPIDVQELGCD---FLAF 220 (405)
T ss_pred CHHHHHHhcCCCceEEEEECcccccccc---chHHHHHHHHHHcCCEEEEECcccc----CccCCCchhcCCC---EEEE
Confidence 9999999999999999999999999999 5799999999999999999999987 6677788888876 9999
Q ss_pred cCccccCCC-CceeEEEEeeCCCCcccchhHHHHHHhh-----------------------hhhccCcchHHHHHHHHHH
Q 014603 252 SISKRWIVP-GWRLGWLVTSDPNGILQDSGIVDSIKSF-----------------------LNISSDPATFIQGAVPQIL 307 (422)
Q Consensus 252 s~sK~~~~~-G~r~G~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~a~~~~l 307 (422)
|.+|++++| | +|+++++ +++.+.+.+. ....++++.....++.+++
T Consensus 221 sgHKwl~gP~G--iGvLy~r--------~~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl 290 (405)
T COG0520 221 SGHKWLLGPTG--IGVLYVR--------KELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAAL 290 (405)
T ss_pred cccccccCCCc--eEEEEEc--------hHHHhhcCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHH
Confidence 999955555 6 8999886 4566666321 1123466666677777778
Q ss_pred hhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC--CceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCC
Q 014603 308 EKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPE--GSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGI 385 (422)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~ 385 (422)
+...+..++++.++.+++.+++.+.|+++|++.+...+. .+..+.+.++.. ++.++...| .++||.++.|.
T Consensus 291 ~~~~~ig~~~i~~~e~~L~~~~~~~L~~~~~v~i~g~~~~~r~~~vsF~v~~~------~~~dv~~~L-~~~gI~vr~g~ 363 (405)
T COG0520 291 DYLLEIGMEAIEAHERELTEYLLEGLSELPGVEIYGPPDADRGGIVSFNVKGI------HPHDVATLL-DEKGIAVRAGH 363 (405)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCcccCceEEEEEeCCC------CHHHHHHHH-HhCCeEEEecc
Confidence 766667789999999999999999999999988554332 344555666542 577777776 55689999999
Q ss_pred CCCC--------CCeEEEEec--cChHHHHHHHHHHHHHHH
Q 014603 386 TVGL--------KDWLRITFA--VEPSALEDGLGRMKAFYD 416 (422)
Q Consensus 386 ~~~~--------~~~iRis~~--~~~~~l~~~~~~l~~~~~ 416 (422)
.|.. ...+|+|++ ++++||+++++.|+++.+
T Consensus 364 ~ca~p~~~~~~~~~~iR~S~~~YNt~edid~l~~aL~~~~~ 404 (405)
T COG0520 364 HCAQPLHRLLGVDATIRASLHLYNTEEDVDRLLEALKKALA 404 (405)
T ss_pred ccccHHHHhcCCCCceEEEEeecCCHHHHHHHHHHHHHHhh
Confidence 8864 455999998 899999999999998764
No 112
>PLN02822 serine palmitoyltransferase
Probab=100.00 E-value=1.4e-32 Score=265.02 Aligned_cols=349 Identities=14% Similarity=0.144 Sum_probs=250.8
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCC------CCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEe
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARF------NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLT 116 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~------~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~ 116 (422)
+|+++|||++++. +++..+|++.+++.+++++... ..|++..++.+++++++++++ .++.|+++
T Consensus 107 ~G~~~id~~s~~~---lgl~~~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~~-------~~~~i~~s 176 (481)
T PLN02822 107 NGKDVVNFASANY---LGLIGNEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFLG-------TPDSILYS 176 (481)
T ss_pred CCceEEEeECCCc---CCCCCCHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHhC-------CCCEEEEC
Confidence 5788999999873 3466789999999999986221 145666678999999999994 34678888
Q ss_pred cCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhh--cCCc-eEEEEeCCC
Q 014603 117 LGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALA--DENT-VALVIINPG 193 (422)
Q Consensus 117 ~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~--~~~~-~~i~i~~p~ 193 (422)
+|++ ++..++.+++++||.|++...+|..+.......+.+++.++.++.+++..+++++++.. .+++ +++++..++
T Consensus 177 ~G~~-a~~sai~a~~~~gd~Ii~d~~~H~s~~~~~~ls~~~~~~~~~nd~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~ 255 (481)
T PLN02822 177 YGLS-TIFSVIPAFCKKGDIIVADEGVHWGIQNGLYLSRSTIVYFKHNDMESLRNTLEKLTAENKRKKKLRRYIVVEAIY 255 (481)
T ss_pred CHHH-HHHHHHHHhCCCCCEEEEeCCccHHHHHHHHHcCCeEEEECCCCHHHHHHHHHHHhhhhcccCCCcEEEEEecCC
Confidence 7776 67889999999999999998888887778888888888887643322322333332221 1234 566777778
Q ss_pred CCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccC--CCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeC
Q 014603 194 NPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFG--NTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD 271 (422)
Q Consensus 194 nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~--~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~ 271 (422)
+++|.+++ +++|+++|++||+++|+||+|+...++ |.+......+...+..+++.||||.|++.| ||++++
T Consensus 256 ~~~G~i~~---L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKalg~~G---G~i~g~- 328 (481)
T PLN02822 256 QNSGQIAP---LDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHALATEG---GFCTGS- 328 (481)
T ss_pred CCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCCCCeEEEecchhhhhhCC---eEEEcC-
Confidence 89999976 788999999999999999999966554 332211111211234588999999998888 999986
Q ss_pred CCCcccchhHHHHHHhhh-hhcc--CcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCc
Q 014603 272 PNGILQDSGIVDSIKSFL-NISS--DPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGS 348 (422)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g 348 (422)
+++++.++... ...+ +.++..+.++.++|+... . ..+..++++++++.+++.|++++++. +..+..+
T Consensus 329 -------~~ii~~~~~~~~~~~fsa~lPp~~~~Aa~~aL~~l~-~-~~~~~~~l~~~~~~l~~~L~~~~g~~-~~~~~~s 398 (481)
T PLN02822 329 -------ARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLE-D-NPSVLAKLKENIALLHKGLSDIPGLS-IGSNTLS 398 (481)
T ss_pred -------HHHHHHHHhcCCceeeccccCHHHHHHHHHHHHHHH-h-CHHHHHHHHHHHHHHHHHHHhcCCcc-cCCCCCC
Confidence 46777766433 2222 334667778777886532 2 25677899999999999999987777 3356678
Q ss_pred eEEEEecCcccccCCC-C---HHHHHHHHHHhcCeEEecCCC--CCC---CCeEEEEec--cChHHHHHHHHHHHHHHHH
Q 014603 349 MFVMVKLNYSLLEGIN-S---DMEFALKLAKEESVIVLPGIT--VGL---KDWLRITFA--VEPSALEDGLGRMKAFYDR 417 (422)
Q Consensus 349 ~~~~~~~~~~~~~~~~-~---~~~~~~~l~~~~gi~v~~g~~--~~~---~~~iRis~~--~~~~~l~~~~~~l~~~~~~ 417 (422)
+++++.++... .... + ..+++.++++++||.+.|+.. ++. +.++|++++ +++++|++++++|++++.+
T Consensus 399 pi~~l~l~~~~-~~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~~~t~edI~~~~~~l~~~~~~ 477 (481)
T PLN02822 399 PIVFLHLEKST-GSAKEDLSLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSAGHTESDILKASESLKRVAAS 477 (481)
T ss_pred CEEEEEeCCCc-ccccchHHHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence 88888886320 0000 1 256778887678999998743 321 357999887 8999999999999999887
Q ss_pred hcc
Q 014603 418 HAK 420 (422)
Q Consensus 418 ~~~ 420 (422)
...
T Consensus 478 ~~~ 480 (481)
T PLN02822 478 VLK 480 (481)
T ss_pred Hhc
Confidence 643
No 113
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=100.00 E-value=4.5e-32 Score=260.43 Aligned_cols=336 Identities=17% Similarity=0.216 Sum_probs=248.6
Q ss_pred CCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCC-----CCCC---CCCCHHHHHHHHHHHhhcCCCCCC-CCCEE
Q 014603 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFN-----CYSS---TVGILPARRAIADYLNRDLPYKLS-PDDVY 114 (422)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~-----~y~~---~~g~~~lr~~ia~~l~~~~~~~~~-~~~i~ 114 (422)
+.++++|+++.++ ++|+.+.+++.+.+.....+ .|.. ...+.++|+.++++++ .. +++|+
T Consensus 30 ~~~~iyLd~a~~~-----~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~------~~~~~~v~ 98 (424)
T PLN02855 30 GSKLVYLDNAATS-----QKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFIN------ASTSREIV 98 (424)
T ss_pred CCCeEEeeCcccc-----CCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcC------CCCCCEEE
Confidence 4578999998855 56788999998877542111 1111 1224688899999984 33 57999
Q ss_pred EecCHHHHHHHHHHHh----cCCCCEEEecCCCccc----hHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceE
Q 014603 115 LTLGCTQAIEVILTVL----ARPGANILLPRPGFPY----YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVA 186 (422)
Q Consensus 115 ~~~g~~~a~~~~~~~l----~~~gd~Vl~~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~ 186 (422)
+|+|+|++++.+++++ +++||+|+++.++|++ |...++..|.+++.+++++. ..+|++.+++.+++++++
T Consensus 99 ~t~g~t~al~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~~~--~~~~~~~l~~~i~~~t~l 176 (424)
T PLN02855 99 FTRNATEAINLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLTPD--EVLDVEQLKELLSEKTKL 176 (424)
T ss_pred EeCCHHHHHHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEecCCC--CCcCHHHHHHHhccCceE
Confidence 9999999999998863 5789999999998864 45566778999999987543 348999999999889999
Q ss_pred EEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEE
Q 014603 187 LVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGW 266 (422)
Q Consensus 187 i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~ 266 (422)
+++++++||||.++| +++|.++|+++|+++|+|++|+. |....++..++.+ +++.|++|.++.+| +|+
T Consensus 177 v~i~~~~n~tG~~~~---~~~I~~l~~~~g~~vivD~a~~~----g~~~~~~~~~~~d---~~~~s~~K~~gp~G--~G~ 244 (424)
T PLN02855 177 VATHHVSNVLGSILP---VEDIVHWAHAVGAKVLVDACQSV----PHMPVDVQTLGAD---FLVASSHKMCGPTG--IGF 244 (424)
T ss_pred EEEeCccccccccCC---HHHHHHHHHHcCCEEEEEhhhhc----CCcCCCchhcCCC---EEEeecccccCCCc--cEE
Confidence 999999999999976 56778889999999999999964 3333344444433 78999999866566 899
Q ss_pred EEeeCCCCcccchhHHHHHHhh----------------------hhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHH
Q 014603 267 LVTSDPNGILQDSGIVDSIKSF----------------------LNISSDPATFIQGAVPQILEKTEEEFFSKITDILRE 324 (422)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 324 (422)
+++++ ++++++... ....++++....+++.++++...+.++++..++..+
T Consensus 245 l~~~~--------~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~ 316 (424)
T PLN02855 245 LWGKS--------DLLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEVE 316 (424)
T ss_pred EEEch--------hhhhcCCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence 98863 333333211 111345666777777777875555678888999999
Q ss_pred HHHHHHHHhhcCCCCCCCCCCC------CceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCC--------CC
Q 014603 325 TADICCDRLKEIPCITCPKKPE------GSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVG--------LK 390 (422)
Q Consensus 325 ~~~~l~~~L~~~~~~~~~~~~~------~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~--------~~ 390 (422)
+++.+++.|++++++.+. .+. .+.++.+.++.. +..++...|.+++||.+..|..|. .+
T Consensus 317 l~~~l~~~L~~~~g~~i~-~~~~~~~~~r~~~v~~~~~~~------~~~~v~~~L~~~~gI~v~~g~~c~~~~~~~~g~~ 389 (424)
T PLN02855 317 LGTYLYEKLSSVPGVRIY-GPKPSEGVGRAALCAFNVEGI------HPTDLSTFLDQQHGVAIRSGHHCAQPLHRYLGVN 389 (424)
T ss_pred HHHHHHHHHhcCCCEEEe-CCCcccccCcccEEEEEECCc------CHHHHHHHhcccCCEEEechhhhhHHHHHHhCCC
Confidence 999999999998887744 321 134555666531 456676766555599999887653 35
Q ss_pred CeEEEEec--cChHHHHHHHHHHHHHHHHhc
Q 014603 391 DWLRITFA--VEPSALEDGLGRMKAFYDRHA 419 (422)
Q Consensus 391 ~~iRis~~--~~~~~l~~~~~~l~~~~~~~~ 419 (422)
+++|+|++ ++++|++++++.|+++++.++
T Consensus 390 ~~iRiS~~~ynt~~di~~l~~~l~~~~~~~~ 420 (424)
T PLN02855 390 ASARASLYFYNTKEEVDAFIHALKDTIAFFS 420 (424)
T ss_pred CeEEEEeccCCCHHHHHHHHHHHHHHHHHHH
Confidence 78999998 789999999999999987754
No 114
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=100.00 E-value=4.7e-32 Score=258.96 Aligned_cols=332 Identities=17% Similarity=0.185 Sum_probs=246.5
Q ss_pred CCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCC-C-------CCCCHHHHHHHHHHHhhcCCCCCCCCCEEEe
Q 014603 45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYS-S-------TVGILPARRAIADYLNRDLPYKLSPDDVYLT 116 (422)
Q Consensus 45 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~-~-------~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~ 116 (422)
.++|+|+++..+ ++++.+.+++.+.+.....+... . ...++++|+.++++++. .++++|++|
T Consensus 22 ~~~iYld~a~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~-----~~~~~v~~t 91 (406)
T PRK09295 22 LPLAYLDSAASA-----QKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINA-----RSAEELVFV 91 (406)
T ss_pred CceEEEeCcccc-----cCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCc-----CCCCeEEEe
Confidence 468999999865 67789999999888642211111 1 12256888889998842 157899999
Q ss_pred cCHHHHHHHHHHH----hcCCCCEEEecCCCccc----hHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEE
Q 014603 117 LGCTQAIEVILTV----LARPGANILLPRPGFPY----YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALV 188 (422)
Q Consensus 117 ~g~~~a~~~~~~~----l~~~gd~Vl~~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~ 188 (422)
+|+|++++.++.+ ++++||+|++++++|++ +...++..|++++.++.++ ++.+|++.|++.+++++++++
T Consensus 92 ~g~t~~l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~i~~~t~lv~ 169 (406)
T PRK09295 92 RGTTEGINLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNP--DGTLQLETLPALFDERTRLLA 169 (406)
T ss_pred CCHHHHHHHHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCC--CCCCCHHHHHHhcCCCcEEEE
Confidence 9999999999886 45789999999998864 4556677899999998753 345899999999988999999
Q ss_pred EeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEE
Q 014603 189 IINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLV 268 (422)
Q Consensus 189 i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~ 268 (422)
+++|+||||.++| +++|.++|+++|+++++|++|+. +....++...+.+ +++.|++|.++.+| +|+++
T Consensus 170 l~~~~n~tG~~~~---~~~i~~~~~~~~~~vivD~a~~~----g~~~~~~~~~~~D---~~~~s~~K~~gp~G--~G~l~ 237 (406)
T PRK09295 170 ITHVSNVLGTENP---LAEMIALAHQHGAKVLVDGAQAV----MHHPVDVQALDCD---FYVFSGHKLYGPTG--IGILY 237 (406)
T ss_pred EecchhcccccCC---HHHHHHHHHHcCCEEEEEccccc----CccccCchhcCCC---EEEeehhhccCCCC--cEEEE
Confidence 9999999999975 67788889999999999999976 3333344444443 88899999877666 79998
Q ss_pred eeCCCCcccchhHHHHHHh-----------------------hhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHH
Q 014603 269 TSDPNGILQDSGIVDSIKS-----------------------FLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRET 325 (422)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 325 (422)
+++ ++++.+.. .....++++.....++.++++...+..++...++.+++
T Consensus 238 ~~~--------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l 309 (406)
T PRK09295 238 VKE--------ALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQNL 309 (406)
T ss_pred Ech--------HhHhhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 863 33333221 11123477778888888888765555678888899999
Q ss_pred HHHHHHHhhcCCCCCCCCCCC-CceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC--------CCeEEEE
Q 014603 326 ADICCDRLKEIPCITCPKKPE-GSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL--------KDWLRIT 396 (422)
Q Consensus 326 ~~~l~~~L~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--------~~~iRis 396 (422)
++++.+.|++++++.+. .|. ....+.+.++.. +..++... +.++||.+..|..|.. ++.+|+|
T Consensus 310 ~~~l~~~l~~~~~~~~~-~~~~~~~iv~~~~~~~------~~~~~~~~-L~~~gI~v~~g~~c~~~~~~~~~~~~~iRiS 381 (406)
T PRK09295 310 MHYALSQLESVPDLTLY-GPQNRLGVIAFNLGKH------HAYDVGSF-LDNYGIAVRTGHHCAMPLMAYYNVPAMCRAS 381 (406)
T ss_pred HHHHHHHHhcCCCEEEe-CCCCCceEEEEEECCc------CHHHHHHH-HHhCCeEEeccccchHHHHHHHCCCCEEEEE
Confidence 99999999998887744 332 122344445431 45566554 5778999999886642 4689999
Q ss_pred ec--cChHHHHHHHHHHHHHHH
Q 014603 397 FA--VEPSALEDGLGRMKAFYD 416 (422)
Q Consensus 397 ~~--~~~~~l~~~~~~l~~~~~ 416 (422)
++ ++++|++++++.|+++..
T Consensus 382 ~~~ynt~~did~l~~~l~~i~~ 403 (406)
T PRK09295 382 LAMYNTHEEVDRLVAGLQRIHR 403 (406)
T ss_pred ccCCCCHHHHHHHHHHHHHHHH
Confidence 98 789999999999988653
No 115
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=100.00 E-value=1.1e-31 Score=248.25 Aligned_cols=309 Identities=17% Similarity=0.175 Sum_probs=228.8
Q ss_pred CCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEE
Q 014603 58 FPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANI 137 (422)
Q Consensus 58 ~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~V 137 (422)
|.++..+|.+.++..+.++... ++...+.++++.+|+++ +++++++++++|+++|+..++.+++++||.|
T Consensus 29 ylgl~~~~~~~~~~~~~~~~~~----g~~~~~~~Le~~lA~~~------g~~~e~ilv~~gg~~a~~~~~~al~~~gd~V 98 (346)
T TIGR03576 29 LTGLAGGFKIDEEDLELLETYV----GPAIFEEKVQELGREHL------GGPEEKILVFNRTSSAILATILALEPPGRKV 98 (346)
T ss_pred cccCCCChhHHHHHHHHHHHhc----CCHHHHHHHHHHHHHHc------CCCcceEEEECCHHHHHHHHHHHhCCCCCEE
Confidence 4556677899998888876521 22344678888888887 5678999999999999999999999999999
Q ss_pred Eec---CCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHH
Q 014603 138 LLP---RPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKK 214 (422)
Q Consensus 138 l~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~ 214 (422)
+++ .|+|..+...++..|.++... .+++.++. .++++++++ ++.+++|.+++.+++++|+++|++
T Consensus 99 li~~~d~p~~~s~~~~~~l~ga~~~~~---------~~l~~l~~--~~~~~lIii-tg~s~~G~v~~~~~L~~i~~la~~ 166 (346)
T TIGR03576 99 VHYLPEKPAHPSIPRSCKLAGAEYFES---------DELSELKK--IDGTSLVVI-TGSTMDLKVVSEEDLKRVIKQAKS 166 (346)
T ss_pred EECCCCCCCchhHHHHHHHcCCEEecc---------CCHHHHhh--CcCceEEEE-ECCCCCCcccCHHHHHHHHHHHHH
Confidence 975 578888888999888875322 13444433 245676666 457899999999999999999999
Q ss_pred cCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhhh-cc
Q 014603 215 LGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SS 293 (422)
Q Consensus 215 ~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 293 (422)
+|+++|+||+|+.+........+...++. + +++.|+|| +++|+|+||++++ +++++.+...... ..
T Consensus 167 ~~~~livDEAy~~~~~~~~~~~~~~~~~~--d-ivv~s~SK--alaG~r~G~v~~~--------~~li~~l~~~~~~~~~ 233 (346)
T TIGR03576 167 KEAIVLVDDASGARVRRLYGQPPALDLGA--D-LVVTSTDK--LMDGPRGGLLAGR--------KELVDKIKSVGEQFGL 233 (346)
T ss_pred cCCEEEEECCccccccccCCCCCHHHcCC--c-EEEeccch--hccccceEEEEeC--------HHHHHHHHHhhcCccc
Confidence 99999999999875432111112222222 2 67789999 4789999999986 5788888876643 23
Q ss_pred CcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHH
Q 014603 294 DPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKL 373 (422)
Q Consensus 294 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l 373 (422)
+.+++.++++.++|+... .+..++.++++++.+.+.++++ . + .|..+.|+|++++.. ++.+++..+
T Consensus 234 s~~~~~~~aa~~aL~~~~---~~~~~~~l~~r~~~~~~~l~~~---~-~-~~~~~~f~~~~~~~~------~~~~~~~~l 299 (346)
T TIGR03576 234 EAQAPLLAAVVRALEEFE---LSRIRDAFKRKEEVYLRLFDKL---N-V-ERTPTGFVIKGVEEE------KLIEIGLDL 299 (346)
T ss_pred CccHHHHHHHHHHHhhcc---HHHHHHHHHHHHHHHHHHHHhC---C-C-CcCCCeEEEEeCCCC------CHHHHHHHH
Confidence 457778899888887532 3456677888888888877753 3 2 233445899888631 345677888
Q ss_pred HHhcCeEEecCCCCC-CCCeEEEEeccChH---HHHHHHHHHHHHH
Q 014603 374 AKEESVIVLPGITVG-LKDWLRITFAVEPS---ALEDGLGRMKAFY 415 (422)
Q Consensus 374 ~~~~gi~v~~g~~~~-~~~~iRis~~~~~~---~l~~~~~~l~~~~ 415 (422)
++++||.++||..|. .++++|||++++++ +.+++++.|++.+
T Consensus 300 l~~~gV~v~~~~~f~~~~~~vRis~~~~~~~~~~~~~~~~al~~~~ 345 (346)
T TIGR03576 300 LRNYGIITITAVGMPGASKTLRFDLAAKDAERIGDDYLVEAVKDSL 345 (346)
T ss_pred HHhCCEEEeCCcccCCCCCeEEEEEecChHHhcCHHHHHHHHHhcc
Confidence 899999999998773 47899999997765 8888888887654
No 116
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=100.00 E-value=1.9e-31 Score=255.04 Aligned_cols=335 Identities=19% Similarity=0.232 Sum_probs=245.0
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCC-C-------CCCCHHHHHHHHHHHhhcCCCCCC-CCCE
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYS-S-------TVGILPARRAIADYLNRDLPYKLS-PDDV 113 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~-~-------~~g~~~lr~~ia~~l~~~~~~~~~-~~~i 113 (422)
.+.+++.|+++..+ ++|+.+.+++.+.+.....+... . ...++++|+.++++++ .+ +++|
T Consensus 15 ~~~~~~yld~~~~~-----~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~------~~~~~~v 83 (403)
T TIGR01979 15 NGKPLVYLDSAATS-----QKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFIN------AASDEEI 83 (403)
T ss_pred CCCceEEEeCcccc-----CCCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhC------cCCCCeE
Confidence 35678999999855 56788999998876542111110 0 1245688999999984 44 6799
Q ss_pred EEecCHHHHHHHHHHHh----cCCCCEEEecCCCccch----HHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCce
Q 014603 114 YLTLGCTQAIEVILTVL----ARPGANILLPRPGFPYY----EARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTV 185 (422)
Q Consensus 114 ~~~~g~~~a~~~~~~~l----~~~gd~Vl~~~~~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~ 185 (422)
++++|++++++.++.++ .++||+|+++++.|++. ...++..|.+++.++.+ .++.+|++.+++.++++++
T Consensus 84 ~~~~g~t~~l~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~--~~~~~~~~~l~~~i~~~~~ 161 (403)
T TIGR01979 84 VFTRGTTESINLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLD--DDGTLDLDDLEKLLTEKTK 161 (403)
T ss_pred EEeCCHHHHHHHHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEecC--CCCCCCHHHHHHHhccCCe
Confidence 99999999999998875 57899999999988653 45566789999999875 3456899999999988999
Q ss_pred EEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeE
Q 014603 186 ALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLG 265 (422)
Q Consensus 186 ~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G 265 (422)
++++++++||||..++ +++|.++|+++|+++|+|++|+. +....++..++. .+++.|++|.++.+| +|
T Consensus 162 lv~~~~~~~~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~----g~~~~~~~~~~~---d~~~~s~~K~~gp~G--~g 229 (403)
T TIGR01979 162 LVAITHVSNVLGTVNP---VEEIAKLAHQVGAKVLVDGAQAV----PHMPVDVQALDC---DFYVFSGHKMYGPTG--IG 229 (403)
T ss_pred EEEEEcccccccccCC---HHHHHHHHHHcCCEEEEEchhhc----CccccCccccCC---CEEEEecccccCCCC--ce
Confidence 9999999999999976 77888889999999999999975 222233333333 388999999887666 88
Q ss_pred EEEeeCCCCcccchhHHHHHHhh----------------------hhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHH
Q 014603 266 WLVTSDPNGILQDSGIVDSIKSF----------------------LNISSDPATFIQGAVPQILEKTEEEFFSKITDILR 323 (422)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 323 (422)
++++++ ++.+.+... ....++++.....++.++++...+...+...++..
T Consensus 230 ~l~~~~--------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~ 301 (403)
T TIGR01979 230 VLYGKE--------ELLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEH 301 (403)
T ss_pred EEEEch--------HHHhcCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 988753 343433211 00123566667777777776544445677888999
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCC----CceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCC--------CCCC
Q 014603 324 ETADICCDRLKEIPCITCPKKPE----GSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITV--------GLKD 391 (422)
Q Consensus 324 ~~~~~l~~~L~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~--------~~~~ 391 (422)
++++.+.+.|++++++.+. .|. .+.++.+.++.. +..++.. .++++||.+.+|..| +..+
T Consensus 302 ~l~~~l~~~l~~~~g~~~~-~~~~~~~~~~~v~~~~~~~------~~~~~~~-~L~~~gI~v~~g~~~~~~~~~~~~~~~ 373 (403)
T TIGR01979 302 ELTAYALERLGEIPGLRIY-GPRDAEDRGGIISFNVEGV------HPHDVGT-ILDEEGIAVRSGHHCAQPLMRRFGVPA 373 (403)
T ss_pred HHHHHHHHHHhcCCCEEEe-CCCCccccCceEEEEeCCc------CHHHHHH-HHhhCCEEEcchhhhhHHHHHHhCCCC
Confidence 9999999999988887743 332 133555555431 3455655 456789999987633 3467
Q ss_pred eEEEEec--cChHHHHHHHHHHHHHHHHh
Q 014603 392 WLRITFA--VEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 392 ~iRis~~--~~~~~l~~~~~~l~~~~~~~ 418 (422)
++|||++ ++++|++++++.|+++++.+
T Consensus 374 ~iRiS~~~~~t~~di~~l~~~l~~~~~~~ 402 (403)
T TIGR01979 374 TCRASFYIYNTEEDIDALVEALKKVRKFF 402 (403)
T ss_pred EEEEEeccCCCHHHHHHHHHHHHHHHHHh
Confidence 8999998 68899999999999887654
No 117
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=100.00 E-value=5.6e-31 Score=251.09 Aligned_cols=332 Identities=16% Similarity=0.173 Sum_probs=235.8
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCC---CC----HHHHHHHHHHHhhcCCCCCCCCCEEE
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTV---GI----LPARRAIADYLNRDLPYKLSPDDVYL 115 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~---g~----~~lr~~ia~~l~~~~~~~~~~~~i~~ 115 (422)
+++++|||+.++ +++++.+|++++++.+.+.... ..|++.. |. .++|+.+|++++ .+++++
T Consensus 36 ~g~~~i~~~~~~---~lg~~~~~~v~~~~~~~~~~~~-~~~~~s~~~~G~~~~~~~le~~ia~~~g--------~~~~ii 103 (393)
T TIGR01822 36 DGREVLNFCANN---YLGLSSHPDLIQAAKDALDEHG-FGMSSVRFICGTQDIHKELEAKIAAFLG--------TEDTIL 103 (393)
T ss_pred CCceEEEeeCCC---ccccCCCHHHHHHHHHHHHHhC-CCCCCcCcccCChHHHHHHHHHHHHHhC--------CCcEEE
Confidence 578899999997 3457888999999999887632 2555544 64 789999999983 246777
Q ss_pred ecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC------CceEEEE
Q 014603 116 TLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE------NTVALVI 189 (422)
Q Consensus 116 ~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~i~i 189 (422)
++|+++|+..++.+++++||.|++++++|+++...++..+...+.++ ..|++.+++.+++ +++++++
T Consensus 104 ~~~~~~a~~~~~~~l~~~gd~vi~~~~~~~s~~~~~~~~~~~~~~~~-------~~d~~~l~~~i~~~~~~~~~~~~v~~ 176 (393)
T TIGR01822 104 YASCFDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYA-------NNDMADLEAQLKEARAAGARHRLIAT 176 (393)
T ss_pred ECchHHHHHHHHHHhCCCCCEEEEeccccHHHHHHHHhcCCceEEeC-------CCCHHHHHHHHHhhhhcCCCceEEEE
Confidence 88999999999999999999999999999999888877776654332 2688888887763 6777777
Q ss_pred eCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCC-CCeEEEecCccccCCCCceeEEEE
Q 014603 190 INPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSI-VPVLTLGSISKRWIVPGWRLGWLV 268 (422)
Q Consensus 190 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~-~~~i~i~s~sK~~~~~G~r~G~~~ 268 (422)
.+++||||.+. ++++|+++|++||+++|+|++|+...............+.. +..++++|+||++ +|+|.||++
T Consensus 177 ~~v~~~tG~~~---~l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~di~~~s~sK~l--~g~r~G~~~ 251 (393)
T TIGR01822 177 DGVFSMDGVIA---PLDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVMGRVDIITGTLGKAL--GGASGGFTT 251 (393)
T ss_pred eCCccCCCCcC---CHHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCCCCCeEEEEEChHHh--hCCCcEEEE
Confidence 78899999995 57888999999999999999996432221111111111111 2358889999985 467899998
Q ss_pred eeCCCCcccchhHHHHHHhhhh---hccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 014603 269 TSDPNGILQDSGIVDSIKSFLN---ISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKP 345 (422)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 345 (422)
++ +++++.+..... ..++.++..+.++.++++.. ...++.+++++++++++.+.|++. ++.+. .+
T Consensus 252 ~~--------~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~ 319 (393)
T TIGR01822 252 AR--------KEVVELLRQRSRPYLFSNSLPPAVVGASIKVLEML--EASNELRDRLWANTRYFRERMEAA-GFDIK-PA 319 (393)
T ss_pred eC--------HHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHc-CCCCC-CC
Confidence 86 467777765321 22233444555666666542 234667788999999999999886 66632 33
Q ss_pred CCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCC----CCCeEEEEec--cChHHHHHHHHHHHHHHHHh
Q 014603 346 EGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVG----LKDWLRITFA--VEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 346 ~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~----~~~~iRis~~--~~~~~l~~~~~~l~~~~~~~ 418 (422)
. +.++.+.++.. .+..++...|++ +||.+. +..|. ....+|++++ +++++|++++++|++++++.
T Consensus 320 ~-~~~~~i~~~~~-----~~~~~l~~~L~~-~gI~v~-~~~~~~~~~~~~~iRis~~~~~t~edi~~~~~~l~~~~~~~ 390 (393)
T TIGR01822 320 D-HPIIPVMLYDA-----VLAQRFARRLLE-EGIYVT-GFFYPVVPKGQARIRVQISAAHTEEQLDRAVEAFTRIGREL 390 (393)
T ss_pred C-CCEEEEEeCCH-----HHHHHHHHHHHH-CCeeEe-eeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHh
Confidence 3 33444444321 135667777655 599997 43332 1346999887 68999999999999987654
No 118
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=2e-31 Score=232.96 Aligned_cols=346 Identities=26% Similarity=0.431 Sum_probs=264.4
Q ss_pred HHHHHHHHHHhhC--CCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhc-CCCCEEEecC
Q 014603 65 SVAVDAIVHSVRS--ARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLA-RPGANILLPR 141 (422)
Q Consensus 65 ~~v~~a~~~~~~~--~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~-~~gd~Vl~~~ 141 (422)
..+++.....+.. +....|..+.|++-+|+.+|+|+.++-|++.+|++|++|+|++.|+..++..++ .+.+.|+++-
T Consensus 89 ~Dai~RA~~~L~~~gGs~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~~~~~GvliPi 168 (475)
T KOG0258|consen 89 TDAIKRAKRILNDCGGSLGAYSDSQGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIAGKKTGVLIPI 168 (475)
T ss_pred HHHHHHHHHHHHhcCCcccccccccCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhcCCCCceEeec
Confidence 3455555555543 356689999999999999999999999989999999999999999999999875 4678999999
Q ss_pred CCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC-----CceEEEEeCCCCCcccccCHHHHHHHHHHHHHcC
Q 014603 142 PGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE-----NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLG 216 (422)
Q Consensus 142 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-----~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~ 216 (422)
|.|+-|.......|...+.+-++.+.+|.+|.++|++.+++ +++++++.||.||||.+++.+-+++|.++|.+++
T Consensus 169 PQYPLYsAti~l~~~~~v~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~~~~ 248 (475)
T KOG0258|consen 169 PQYPLYSATISLLGGTQVPYYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEENIEGIICFAAEEG 248 (475)
T ss_pred CCCchhHHHHHHhCCcccceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcHHHHHHHHHHHHHcC
Confidence 99999999999999999999999899999999999876543 6789999999999999999999999999999999
Q ss_pred cEEEEcccccccccCCC-CCCCcc----ccC---C-CCCeEEEecCccccCC-CCceeEEEEeeCCCCcccchhHHHHHH
Q 014603 217 IMVIADEVYDHLAFGNT-PFVPMG----VFG---S-IVPVLTLGSISKRWIV-PGWRLGWLVTSDPNGILQDSGIVDSIK 286 (422)
Q Consensus 217 ~~li~D~~~~~~~~~~~-~~~~~~----~~~---~-~~~~i~i~s~sK~~~~-~G~r~G~~~~~~~~~~~~~~~~~~~~~ 286 (422)
++++.||+|..-.|.+. .+.++. +++ . ...++.+.|.||.+.+ -|.|-|++-.-+-. ++..+.+.
T Consensus 249 l~llaDEVYQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~-----prv~~qi~ 323 (475)
T KOG0258|consen 249 LVLLADEVYQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNRD-----PRVKQQIK 323 (475)
T ss_pred eEEechHHHHhhccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecccCC-----hhHHHHHH
Confidence 99999999998887653 343422 122 1 1236888899999855 68999998553221 45666665
Q ss_pred hhhhhccCcchHHHHHHHHHHhhch---------HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCc
Q 014603 287 SFLNISSDPATFIQGAVPQILEKTE---------EEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNY 357 (422)
Q Consensus 287 ~~~~~~~~~~~~~~~a~~~~l~~~~---------~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~ 357 (422)
+.....-+++...|........... ....+.+.+.++++.+.+.+.+..++++.|. .+++++|.+.++..
T Consensus 324 Kl~si~lc~~V~GQ~~vdl~VnPP~Pgd~Sy~~~~~Ekd~il~~l~~ra~l~~~~~ns~~gi~cn-~~qGAMY~fP~i~l 402 (475)
T KOG0258|consen 324 KLASIKLCPQVSGQKLVDLVVNPPKPGDPSYDLFSSEKDGILSSLRSRAKLTEDAFNSLEGISCN-PVQGAMYLFPQISL 402 (475)
T ss_pred HHHhhhhcCCccchhhhceecCCCCCCCcchhhhhhhhHhHHHHHHHHhHHHHHHHhhcCceeec-cCccceeecccccC
Confidence 5554444556666666555444211 1234455677888899999999999999954 89999999887643
Q ss_pred cc-------ccCCCCHHHHHHHHHHhcCeEEecCCCCCCC-C--eEEEEeccChHHHHHHHHHHHHHHHHhc
Q 014603 358 SL-------LEGINSDMEFALKLAKEESVIVLPGITVGLK-D--WLRITFAVEPSALEDGLGRMKAFYDRHA 419 (422)
Q Consensus 358 ~~-------~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~-~--~iRis~~~~~~~l~~~~~~l~~~~~~~~ 419 (422)
+. ..+...+.-.+.+|++..||.++||++||.. + ++|.++-... + +.+++++++-.++-
T Consensus 403 P~kaie~A~~~~~~PD~FYc~~LLe~tGIcvVPGSGFGQ~~GtyH~R~TiLp~~--~-~~i~~~~~fH~~f~ 471 (475)
T KOG0258|consen 403 PPKAIEAAKALGIAPDEFYCLKLLEATGICVVPGSGFGQKEGTYHFRTTILPPG--L-EIIEKFKKFHAEFM 471 (475)
T ss_pred CHHHHHHHHHhCCCCcHHHHHHHHHhcCeEEecCCCCCCCCceeEEEEeecCch--h-HHHHHHHHHHHHHH
Confidence 31 1233344556778899999999999999983 3 6888875332 4 67777776655543
No 119
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=5e-31 Score=232.05 Aligned_cols=372 Identities=22% Similarity=0.229 Sum_probs=278.9
Q ss_pred HHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCCCC-CCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHH
Q 014603 19 ELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFP-SFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIA 97 (422)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~-~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia 97 (422)
.+...+++.|.++.+.+.++ ..++.|||++|..-... ..|.-+.|.+|-...........|.|..|++++++.++
T Consensus 4 ~i~~~p~DpIlgL~e~f~~D----~R~~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~~~~k~Yl~i~G~~~f~~~~~ 79 (396)
T COG1448 4 KIEAAPADPILGLKEAFKAD----PRPNKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQEKTKNYLPIEGLPEFLEAVQ 79 (396)
T ss_pred ccccCCCCchhHHHHHHhcC----CCcCeeeeeeeeeeCCCCCcchhHHHHHHHHHhhccccccccCCcCCcHHHHHHHH
Confidence 46677888899999888776 57788999999754322 24566778777777776666678999999999999999
Q ss_pred HHHhhcCCCCCCCCCE--EEecCHHHHHHHHHHHhc--CCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCH
Q 014603 98 DYLNRDLPYKLSPDDV--YLTLGCTQAIEVILTVLA--RPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDL 173 (422)
Q Consensus 98 ~~l~~~~~~~~~~~~i--~~~~g~~~a~~~~~~~l~--~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~ 173 (422)
+++......-+..+++ +-|.|||.|+..+...+. .+..+|++++|+|.++..++...|.++..+|..+..+..+|.
T Consensus 80 ~llFG~d~~~l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~If~~aGl~v~~Y~Yyd~~~~~~df 159 (396)
T COG1448 80 KLLFGADSPALAEDRVATVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKAIFEAAGLEVETYPYYDAETKGLDF 159 (396)
T ss_pred HHhcCCCcHHHHhhhHhheecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHHHHHhcCCceeeeeccccccccccH
Confidence 9994311111344555 468999999999987763 466789999999999999999999999999987766667898
Q ss_pred HHHHHhhc---CCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCC-CCCCccccC-CCCCeE
Q 014603 174 DAVEALAD---ENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNT-PFVPMGVFG-SIVPVL 248 (422)
Q Consensus 174 ~~l~~~~~---~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~-~~~~~~~~~-~~~~~i 248 (422)
+.+.+.++ ++..+++-..+|||||.-++.++|++|+++.++.|.+.++|-+|.++.-+.. ....+..+. ....++
T Consensus 160 ~~mla~L~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~GleeDa~~lR~~a~~~~~~l 239 (396)
T COG1448 160 DGMLADLKTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADGLEEDAYALRLFAEVGPELL 239 (396)
T ss_pred HHHHHHHHhCCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccchHHHHHHHHHHHHhCCcEE
Confidence 88876553 3555555566699999999999999999999999999999999998654311 111111111 112378
Q ss_pred EEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhh-hhccCcchHHHHHHHHHHhhch-----HHHHHHHHHHH
Q 014603 249 TLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQGAVPQILEKTE-----EEFFSKITDIL 322 (422)
Q Consensus 249 ~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~~~~ 322 (422)
+..|+||.|++.|-|+|.+..-.++... ..++..+++... ...++|+......+..+|++.. +..+...++++
T Consensus 240 va~S~SKnfgLYgERVGa~~vva~~~~~-a~~v~sqlk~~iR~~ySnPP~~Ga~vva~IL~~p~Lra~W~~El~~Mr~Ri 318 (396)
T COG1448 240 VASSFSKNFGLYGERVGALSVVAEDAEE-ADRVLSQLKAIIRTNYSNPPAHGAAVVATILNNPELRAEWEQELEEMRQRI 318 (396)
T ss_pred EEehhhhhhhhhhhccceeEEEeCCHHH-HHHHHHHHHHHHHhccCCCchhhHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999997553222000 022334444433 3456888889999999998744 34567778899
Q ss_pred HHHHHHHHHHhhcC-C--CCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec-
Q 014603 323 RETADICCDRLKEI-P--CITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA- 398 (422)
Q Consensus 323 ~~~~~~l~~~L~~~-~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~- 398 (422)
.++|..|.+.|++. + .+. .+..+.|+|.+..+ +.+.+.+|.++++|++..+. |||++
T Consensus 319 ~~mR~~lv~~L~~~~~~~~f~-~i~~Q~GMFsy~Gl----------s~~QV~rLree~~IY~v~sG--------Ri~vaG 379 (396)
T COG1448 319 LEMRQALVDALKALGAPRNFD-FIISQRGMFSYTGL----------SPEQVDRLREEFGIYLVASG--------RINVAG 379 (396)
T ss_pred HHHHHHHHHHHHhhCCCcccc-hHhhcCceeecCCC----------CHHHHHHHHHhccEEEecCC--------eeeecc
Confidence 99999999999983 2 255 44677899987655 34567888899999998754 99998
Q ss_pred cChHHHHHHHHHHHHH
Q 014603 399 VEPSALEDGLGRMKAF 414 (422)
Q Consensus 399 ~~~~~l~~~~~~l~~~ 414 (422)
.++.+++.+++.|.++
T Consensus 380 l~~~ni~~va~ai~~v 395 (396)
T COG1448 380 LNTSNIDYVAKAIAAV 395 (396)
T ss_pred CChhhHHHHHHHHHhh
Confidence 8899999999998875
No 120
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=100.00 E-value=1.6e-30 Score=245.41 Aligned_cols=327 Identities=15% Similarity=0.144 Sum_probs=232.7
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCC--CCC----CCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEe
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARF--NCY----SSTVGILPARRAIADYLNRDLPYKLSPDDVYLT 116 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~y----~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~ 116 (422)
+|..+|||+.|++ .+++.+|++.+++.+++..... ..| +......++++.++++++ .++.++++
T Consensus 14 ~g~~~id~~~~~~---~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~-------~~~~i~~~ 83 (360)
T TIGR00858 14 DGRRLLNFSSNDY---LGLASHPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWKG-------TEAALLFS 83 (360)
T ss_pred CCceEEecccCCc---ccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhC-------CCCEEEEC
Confidence 6889999999963 2356778999999998865211 112 112234568888888873 24567777
Q ss_pred cCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC----CceEEEEeCC
Q 014603 117 LGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE----NTVALVIINP 192 (422)
Q Consensus 117 ~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~----~~~~i~i~~p 192 (422)
+|+ +++..++.+++++||+|+++.|+|..+...++..|.+++.++. .|++.+++.++. +++++++.++
T Consensus 84 ~G~-~~~~~~l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~~~~~~~~~~~~v~~~~~ 155 (360)
T TIGR00858 84 SGY-LANVGVISALVGKGDLILSDALNHASLIDGCRLSGARVRRYRH-------NDVEHLERLLEKNRGERRKLIVTDGV 155 (360)
T ss_pred chH-HHHHHHHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEecC-------CCHHHHHHHHHHcccCCCeEEEEeCC
Confidence 665 5555677888899999999999999998888888988876652 478888887753 4577777788
Q ss_pred CCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCC--CCccccCCCCCeEEEecCccccCCCCceeEEEEee
Q 014603 193 GNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPF--VPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTS 270 (422)
Q Consensus 193 ~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~--~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~ 270 (422)
+|++|... ++++|.++|+++|+++|+||+|+.+.+..... .....+..++++++++|+||+|+++| ||++++
T Consensus 156 ~~~~G~~~---~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~g---G~~~~~ 229 (360)
T TIGR00858 156 FSMDGDIA---PLPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALGSYG---AYVAGS 229 (360)
T ss_pred ccCCCCCc---CHHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhhhccC---cEEEcC
Confidence 99999884 57888999999999999999998654433211 12222333456899999999998777 999875
Q ss_pred CCCCcccchhHHHHHHhhhh---hccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCC
Q 014603 271 DPNGILQDSGIVDSIKSFLN---ISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEG 347 (422)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~ 347 (422)
+++++.+..... ...+.++..+.++.++++.. ...++.+++++++++.+.+.|+++ ++. + .+..
T Consensus 230 --------~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~l~~~L~~~-~~~-~-~~~~ 296 (360)
T TIGR00858 230 --------QALIDYLINRARTLIFSTALPPAVAAAALAALELI--QEEPWRREKLLALIARLRAGLEAL-GFT-L-MPSC 296 (360)
T ss_pred --------HHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHH--hhCHHHHHHHHHHHHHHHHHHHHc-CCc-c-CCCC
Confidence 456666654322 12234455556666677542 223566789999999999999987 565 3 3555
Q ss_pred ceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC---CCeEEEEec--cChHHHHHHHHHHH
Q 014603 348 SMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL---KDWLRITFA--VEPSALEDGLGRMK 412 (422)
Q Consensus 348 g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~---~~~iRis~~--~~~~~l~~~~~~l~ 412 (422)
+.++|+.++.. .++.++...+ .++||.+.++..+.. .+++||+++ ++++++++++++|+
T Consensus 297 ~~~~~~~~~~~-----~~~~~~~~~l-~~~gI~v~~~~~~~~~~~~~~iRis~~~~~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 297 TPIVPVIIGDN-----ASALALAEEL-QQQGIFVGAIRPPTVPAGTSRLRLTLSAAHTPGDIDRLAEALK 360 (360)
T ss_pred CCEEEEEeCCH-----HHHHHHHHHH-HHCCeeEeeeCCCCCCCCCceEEEEEcCCCCHHHHHHHHHhhC
Confidence 77888887632 1345666666 556999998655432 468999998 58999999998763
No 121
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-30 Score=233.74 Aligned_cols=339 Identities=18% Similarity=0.151 Sum_probs=257.6
Q ss_pred ceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCC-----CCCC--CCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCH
Q 014603 47 LIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFN-----CYSS--TVGILPARRAIADYLNRDLPYKLSPDDVYLTLGC 119 (422)
Q Consensus 47 ~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~-----~y~~--~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~ 119 (422)
+|.|++..++ |+.|++.++|...+.....| .|+. ...+++.|+.||+.+ ++++++|+||+|+
T Consensus 2 miYlD~~ATT-----p~~~~v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~ll------ga~~~eIiFTSG~ 70 (386)
T COG1104 2 MIYLDNAATT-----PVDPEVLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLL------GADPEEIIFTSGA 70 (386)
T ss_pred cccccccccC-----CCCHHHHHHHHHHHHhhcCCccchhHhHHHHHHHHHHHHHHHHHHh------CCCCCeEEEecCC
Confidence 4778888876 77799999999988763222 1211 134678899999999 6688999999999
Q ss_pred HHHHHHHHHHh--c----CCCCEEEecCCCccchHHHHhhC---CCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEe
Q 014603 120 TQAIEVILTVL--A----RPGANILLPRPGFPYYEARATHS---HLEVRHFDLLPAKGWEVDLDAVEALADENTVALVII 190 (422)
Q Consensus 120 ~~a~~~~~~~l--~----~~gd~Vl~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~ 190 (422)
|++.+.++... . +.|..|+++.-+|+.....++.+ |.++.+++++. ++.+|+++|++++++++.++.+.
T Consensus 71 TEsnNlaI~g~~~a~~~~~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V~~--~G~v~~e~L~~al~~~T~LVSim 148 (386)
T COG1104 71 TESNNLAIKGAALAYRNAQKGKHIITSAIEHPAVLNTCRYLERQGFEVTYLPVDS--NGLVDLEQLEEALRPDTILVSIM 148 (386)
T ss_pred cHHHHHHHHhhHHhhhcccCCCeEEEcccccHHHHHHHHHHHhcCCeEEEeCCCC--CCeEcHHHHHHhcCCCceEEEEE
Confidence 99999998872 2 25789999999999887777665 99999999865 45699999999999999999999
Q ss_pred CCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEee
Q 014603 191 NPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTS 270 (422)
Q Consensus 191 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~ 270 (422)
+.||.+|++ +++++|.++|+++++++++|.+|+. |+-+.++..++.| +...|-+|++|..| +|+++.+
T Consensus 149 ~aNnE~G~I---QpI~ei~~i~k~~~i~fHvDAvQa~----Gkipi~~~~~~vD---~ls~SaHK~~GpkG--iGaLyv~ 216 (386)
T COG1104 149 HANNETGTI---QPIAEIGEICKERGILFHVDAVQAV----GKIPIDLEELGVD---LLSFSAHKFGGPKG--IGALYVR 216 (386)
T ss_pred ecccCeeec---ccHHHHHHHHHHcCCeEEEehhhhc----CceeccccccCcc---eEEeehhhccCCCc--eEEEEEC
Confidence 999999999 6799999999999999999999987 6666677666554 77778999988888 7888874
Q ss_pred CCCCcccchhHHHHHHhhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcC-CCCCCCCCC--CC
Q 014603 271 DPNGILQDSGIVDSIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEI-PCITCPKKP--EG 347 (422)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~--~~ 347 (422)
+..... |-+..--.......++.+.....+..++++. ....++....+++.++++|.+.|.+. |++.+...+ .-
T Consensus 217 ~~~~~~--p~i~GGgQE~g~RsGTenv~~Ivg~~~A~~~-a~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~rl 293 (386)
T COG1104 217 PGVRLE--PLIHGGGQERGLRSGTENVPGIVGFGKAAEI-AVEELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPRL 293 (386)
T ss_pred CCCccC--ceeccCcCCCCCCCCCccHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcccCC
Confidence 321110 1111111111224567788888888888875 34667778889999999999999975 776533222 22
Q ss_pred ceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC-------------------CCeEEEEec--cChHHHHH
Q 014603 348 SMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL-------------------KDWLRITFA--VEPSALED 406 (422)
Q Consensus 348 g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~-------------------~~~iRis~~--~~~~~l~~ 406 (422)
...+.+.++.. +.+.++.. ++.+||.+..|+.|.. .+.+|+|++ ++++|++.
T Consensus 294 P~~~~~~f~gv------~gE~ll~~-L~~~gI~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~~ 366 (386)
T COG1104 294 PNILNFSFPGV------EGESLLLA-LDLAGIAVSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLGRFTTEEEIDA 366 (386)
T ss_pred CCeEEEEeCCC------cHHHHHHh-ccccCeEEeccccccCCCCCccHHHHHcCCChHHhCccEEEEcCCCCCHHHHHH
Confidence 34555556542 45555554 4778999999999853 478999999 78999999
Q ss_pred HHHHHHHHHHHhcc
Q 014603 407 GLGRMKAFYDRHAK 420 (422)
Q Consensus 407 ~~~~l~~~~~~~~~ 420 (422)
+++.+.+++++++.
T Consensus 367 ~~~~l~~~i~~lr~ 380 (386)
T COG1104 367 AAEALKEIIKRLRE 380 (386)
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999988754
No 122
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=1.8e-30 Score=247.84 Aligned_cols=341 Identities=15% Similarity=0.171 Sum_probs=235.9
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 122 (422)
+|+.+|||..|.+....+ +.+|.+.+++.+++..... ....+..++++.+++++.+.. ..+++++++||++|
T Consensus 37 dg~~~iD~~~g~~~~~lG-~~~p~v~~a~~~~~~~~~~---~~~~~~~~~~~~la~~l~~~~----~~~~v~~~~gg~eA 108 (396)
T PRK02627 37 DGKEYLDFLAGIAVNNLG-HCHPKLVEAIQEQAAKLIH---TSNLYYIEPQEELAEKLVELS----GMDKVFFCNSGAEA 108 (396)
T ss_pred CCCEEEECCccHHhccCC-CCCHHHHHHHHHHHhhccc---cccccCCHHHHHHHHHHHhhc----CCCEEEECCCcHHH
Confidence 688999999987663222 2468999999998865311 111223577788888887643 34799999999999
Q ss_pred HHHHHHHhcCCC-------CEEEecCCCccchHHHHhhCCCeE-EEeeccC-CCCc----ccCHHHHHHhhcCCceEEEE
Q 014603 123 IEVILTVLARPG-------ANILLPRPGFPYYEARATHSHLEV-RHFDLLP-AKGW----EVDLDAVEALADENTVALVI 189 (422)
Q Consensus 123 ~~~~~~~l~~~g-------d~Vl~~~~~~~~~~~~~~~~g~~~-~~~~~~~-~~~~----~~d~~~l~~~~~~~~~~i~i 189 (422)
+..+++.+...+ ++|++..++|+++...+...+... ...+..+ ..++ ..|++.+++.+.++++++++
T Consensus 109 ~~~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~vii 188 (396)
T PRK02627 109 NEAAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQEGFEPLVEGFIYVPFNDIEALKAAITDKTAAVML 188 (396)
T ss_pred HHHHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCccccccCCCCCCCceEeCCCCHHHHHHhcCCCeEEEEE
Confidence 999999765322 689999999998865554433221 1111111 0111 12889999998878888888
Q ss_pred eCCCCCcc-cccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEE
Q 014603 190 INPGNPCG-NVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLV 268 (422)
Q Consensus 190 ~~p~nptG-~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~ 268 (422)
+.++||+| ..++++++++|.++|+++|+++|+||+|+++.++|.. ..+...+..++ +.+|||.++ +|+|+||++
T Consensus 189 ~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~~-~~~~~~~~~pd---i~t~sK~~~-~G~rig~~~ 263 (396)
T PRK02627 189 EPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGKL-FAYQHYGIEPD---IMTLAKGLG-GGVPIGAVL 263 (396)
T ss_pred ecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCce-eeehhcCCCCC---EEEEcchhh-CCcccEEEE
Confidence 88899999 6889999999999999999999999999987776642 22222332333 346899987 899999999
Q ss_pred eeCCCCcccchhHHHHHHhhh-hhccCcchHHHHHHHHHHhhch-HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC
Q 014603 269 TSDPNGILQDSGIVDSIKSFL-NISSDPATFIQGAVPQILEKTE-EEFFSKITDILRETADICCDRLKEIPCITCPKKPE 346 (422)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~ 346 (422)
++ +++++.+.... ..+.+.+++.++++.++|+... +...++.++.....++.+.+.+.+++.+. . .+.
T Consensus 264 ~~--------~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~-~~~ 333 (396)
T PRK02627 264 AK--------EKVADVFTPGDHGSTFGGNPLACAAALAVIEIIEEEGLLENAAEVGEYLRAKLRELLEKYPGIK-E-VRG 333 (396)
T ss_pred Ec--------HHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCee-e-ecc
Confidence 86 35667665432 2345678899999999987533 22333333333344444444444443332 2 234
Q ss_pred CceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHHHHHHHHHh
Q 014603 347 GSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 347 ~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~l~~~~~~~ 418 (422)
.|.++|+.++. +..++...++++ ||.+.|+. .+++|++++ .+++++++++++|+++++++
T Consensus 334 ~g~~~~i~~~~-------~~~~~~~~l~~~-Gv~v~~~~----~~~lRi~~~~~~~~~~i~~~~~~l~~~l~~~ 395 (396)
T PRK02627 334 LGLMIGIELDR-------PAAEIVKKALEK-GLLINVTG----DNVLRLLPPLIISKEEIDEAVDRLEEVLKEL 395 (396)
T ss_pred CcEEEEEEecC-------cHHHHHHHHHHC-CeEEeecC----CCEEEEECCcccCHHHHHHHHHHHHHHHHhh
Confidence 57888988732 466777777554 99999864 477999875 78999999999999998764
No 123
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=100.00 E-value=4.3e-30 Score=245.64 Aligned_cols=337 Identities=16% Similarity=0.109 Sum_probs=235.3
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCC--CCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARF--NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT 120 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~ 120 (422)
+|..+|||+.|++ ++++.+|.+.+++.+.+..... ..|....|.+++++.+++++.+.+| .++.|++|+| +
T Consensus 40 ~g~~~i~l~~~~~---~~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~la~~~g---~~~~i~~tsG-~ 112 (397)
T PRK06939 40 DGKEVINFCANNY---LGLANHPELIAAAKAALDSHGFGMASVRFICGTQDLHKELEEKLAKFLG---TEDAILYSSC-F 112 (397)
T ss_pred CCCeEEEeeccCc---cccCCCHHHHHHHHHHHHHcCCCCcccccccCCcHHHHHHHHHHHHHhC---CCcEEEEcCh-H
Confidence 5888999999873 3467889999999998865321 1222345778888888888887665 2356777776 7
Q ss_pred HHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC------CceEEEEeCCCC
Q 014603 121 QAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE------NTVALVIINPGN 194 (422)
Q Consensus 121 ~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~i~i~~p~n 194 (422)
+++..++++++++||+|++++|+|+++...+...+.+++.++. .|++.+++.+++ ++++++..+.+|
T Consensus 113 ~a~~~~~~~l~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~ 185 (397)
T PRK06939 113 DANGGLFETLLGKEDAIISDALNHASIIDGVRLCKAKRYRYAN-------NDMADLEAQLKEAKEAGARHKLIATDGVFS 185 (397)
T ss_pred HHHHHHHHHhCCCCCEEEEEhhhhHHHHHHHHhcCCceEEeCC-------CCHHHHHHHHHhhhccCCCCeEEEEecCcC
Confidence 7888999999999999999999999998888888888766643 377777776642 556666556689
Q ss_pred CcccccCHHHHHHHHHHHHHcCcEEEEccccccccc--CCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCC
Q 014603 195 PCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAF--GNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDP 272 (422)
Q Consensus 195 ptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~--~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~ 272 (422)
++|.. +++++|.++|+++|++||+||+|+...+ .+........+. .+.+++++|+||+++ |+|+||++++
T Consensus 186 ~~G~~---~~~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~~--g~r~G~v~~~-- 257 (397)
T PRK06939 186 MDGDI---APLPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVM-DRVDIITGTLGKALG--GASGGYTAGR-- 257 (397)
T ss_pred CCCCc---CCHHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCC-CCCcEEEEECHHHhC--ccCceEEEeC--
Confidence 99986 6789999999999999999999963222 121111111121 123589999999973 5689999986
Q ss_pred CCcccchhHHHHHHhhhh---hccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCce
Q 014603 273 NGILQDSGIVDSIKSFLN---ISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSM 349 (422)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~ 349 (422)
+++++.+..... ..+++++..+.++.++++... ...+.+++++++++.+.+.|+++ ++. ...+.++
T Consensus 258 ------~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~~-~~~-~~~~~~~- 326 (397)
T PRK06939 258 ------KEVIDWLRQRSRPYLFSNSLAPAIVAASIKVLELLE--ESDELRDRLWENARYFREGMTAA-GFT-LGPGEHP- 326 (397)
T ss_pred ------HHHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHc-CCC-cCCCCCC-
Confidence 467777765432 122334444555555565421 13567788999999999999987 565 3244444
Q ss_pred EEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC---CCeEEEEec--cChHHHHHHHHHHHHHHHHh
Q 014603 350 FVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL---KDWLRITFA--VEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~---~~~iRis~~--~~~~~l~~~~~~l~~~~~~~ 418 (422)
++++.++.. .++.+++..++++ ||.+.++.+... .+++|++++ ++++++++++++|++++++.
T Consensus 327 ~~~~~~~~~-----~~~~~~~~~L~~~-gI~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~l~~L~~~~~~~ 394 (397)
T PRK06939 327 IIPVMLGDA-----KLAQEFADRLLEE-GVYVIGFSFPVVPKGQARIRTQMSAAHTKEQLDRAIDAFEKVGKEL 394 (397)
T ss_pred EEEEEECCH-----HHHHHHHHHHHHC-CceEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHh
Confidence 333344321 1356677777655 999986543211 368999986 68999999999999998764
No 124
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=2.6e-30 Score=245.58 Aligned_cols=338 Identities=14% Similarity=0.167 Sum_probs=226.6
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 122 (422)
+|+.++||..|....+.++ .+|.+.+++.+++..... .+.. ...+....+++.|.+.. ..+++++++||++|
T Consensus 29 dG~~~lD~~~g~~~~~lGh-~~p~v~~a~~~~~~~~~~--~~~~-~~~~~~~~la~~l~~~~----~~~~v~~~~sGseA 100 (389)
T PRK01278 29 DGERYLDFASGIAVNSLGH-AHPHLVEALKEQAEKLWH--VSNL-YRIPEQERLAERLVENS----FADKVFFTNSGAEA 100 (389)
T ss_pred CCCEEEECCccHhhccCCC-CCHHHHHHHHHHHHhcCc--cccc-cCChHHHHHHHHHHhhC----CCCEEEEcCCcHHH
Confidence 6888999998865544454 689999999999875211 1111 11223334444443321 34689999999999
Q ss_pred HHHHHHHh----cCCCC----EEEecCCCccchHHHHhhCCCeEEEee-ccC-CCCcc----cCHHHHHHhhcCCceEEE
Q 014603 123 IEVILTVL----ARPGA----NILLPRPGFPYYEARATHSHLEVRHFD-LLP-AKGWE----VDLDAVEALADENTVALV 188 (422)
Q Consensus 123 ~~~~~~~l----~~~gd----~Vl~~~~~~~~~~~~~~~~g~~~~~~~-~~~-~~~~~----~d~~~l~~~~~~~~~~i~ 188 (422)
++.+++++ ..+|| +|++.+++|+++...+...+....... ..+ ..++. .|++.+++.+++++++++
T Consensus 101 ~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~avi 180 (389)
T PRK01278 101 VECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGDIEALKAAITPNTAAIL 180 (389)
T ss_pred HHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCCCHHHHHHhhCCCeEEEE
Confidence 99998876 34565 899999999998766655443322211 001 11111 488999998887788887
Q ss_pred EeCCCCCcc-cccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEE
Q 014603 189 IINPGNPCG-NVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWL 267 (422)
Q Consensus 189 i~~p~nptG-~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~ 267 (422)
+..++|++| .++|.+++++|.++|++||+++|+||+|.++.++|... .....+..++ +.++||.++ +|+|+||+
T Consensus 181 vep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~-~~~~~~~~pd---i~t~sK~l~-~G~~ig~~ 255 (389)
T PRK01278 181 IEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLF-AHEWAGVTPD---IMAVAKGIG-GGFPLGAC 255 (389)
T ss_pred EecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCcce-eecccCCCCC---EEEEehhcc-CCcceEEE
Confidence 776688888 78899999999999999999999999999887766432 2122222222 457899975 89999999
Q ss_pred EeeCCCCcccchhHHHHHHhhh-hhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhh----cCCCCCCC
Q 014603 268 VTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLK----EIPCITCP 342 (422)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~----~~~~~~~~ 342 (422)
+++ +++++.+.... ..+.+.+++.++++.++|+...+.. ..++++++.+.+++.|+ +.+++...
T Consensus 256 ~~~--------~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~---~~~~~~~~~~~l~~~l~~l~~~~~~~~~~ 324 (389)
T PRK01278 256 LAT--------EEAAKGMTPGTHGSTYGGNPLAMAVGNAVLDVILAPG---FLDNVQRMGLYLKQKLEGLVDRFPDVIEE 324 (389)
T ss_pred EEc--------HHHHhccCCCCCCCCCCccHHHHHHHHHHHHHHhhhH---HHHHHHHHHHHHHHHHHHHHhhCCCceee
Confidence 986 35666665443 2344678899999988887532211 12223333333333332 33322112
Q ss_pred CCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHHHHHHHHH
Q 014603 343 KKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGRMKAFYDR 417 (422)
Q Consensus 343 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~l~~~~~~ 417 (422)
....|.++++.++. ++.++...++++ ||.+.|+. .+++|++++ .+++++++++++|++++++
T Consensus 325 -v~g~G~~~~i~~~~-------~~~~~~~~l~~~-GV~~~p~~----~~~lR~~p~~~~~~~~i~~~l~~l~~~l~~ 388 (389)
T PRK01278 325 -VRGKGLLLGLKCVV-------PNRDLVQALRDE-GLLTVGAG----DNVVRLLPPLIITEEEIDEALERLERAAES 388 (389)
T ss_pred -EecccEEEEEEEec-------CHHHHHHHHHHC-CeEEeecC----CCEEEEeCCcccCHHHHHHHHHHHHHHHHh
Confidence 22357777877742 466777777655 99999874 578999975 7899999999999998865
No 125
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=100.00 E-value=2.4e-30 Score=243.52 Aligned_cols=319 Identities=17% Similarity=0.131 Sum_probs=231.1
Q ss_pred CCCcHHHHHHHHHHhhCCCCCCCCC-CCCCHHHHHHHHHHHhhcCCCCCCC-CCEEEecCHHHHHHHHHHHhcCCCCEEE
Q 014603 61 FRTASVAVDAIVHSVRSARFNCYSS-TVGILPARRAIADYLNRDLPYKLSP-DDVYLTLGCTQAIEVILTVLARPGANIL 138 (422)
Q Consensus 61 ~~~~~~v~~a~~~~~~~~~~~~y~~-~~g~~~lr~~ia~~l~~~~~~~~~~-~~i~~~~g~~~a~~~~~~~l~~~gd~Vl 138 (422)
.+.++.+.+++.+.... ..|+. .....++++.+++++ ++++ +.+++++|+++++..++.+++++||+|+
T Consensus 8 ~~~~~~v~~a~~~~~~~---~~~~~~~~~~~~~~~~la~~~------g~~~~~~~~~~~~~t~al~~~~~~~~~~g~~vl 78 (356)
T cd06451 8 SNVPPRVLKAMNRPMLG---HRSPEFLALMDEILEGLRYVF------QTENGLTFLLSGSGTGAMEAALSNLLEPGDKVL 78 (356)
T ss_pred cCCCHHHHHHhCCCccC---CCCHHHHHHHHHHHHHHHHHh------cCCCCCEEEEecCcHHHHHHHHHHhCCCCCEEE
Confidence 46678898888654321 12322 122557777778877 3433 4578899999999999999999999999
Q ss_pred ecCCCccc--hHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC-CceEEEEeCCCCCcccccCHHHHHHHHHHHHHc
Q 014603 139 LPRPGFPY--YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE-NTVALVIINPGNPCGNVYTYQHLQKIAETAKKL 215 (422)
Q Consensus 139 ~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~ 215 (422)
++.++|++ +...++..|.+++.++.++ ++.+|++.+++.+++ +++++++++|+||+|.+++ +++|.++|+++
T Consensus 79 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~~~i~~~~~~~v~i~~~~~~~G~~~~---~~~i~~~a~~~ 153 (356)
T cd06451 79 VGVNGVFGDRWADMAERYGADVDVVEKPW--GEAVSPEEIAEALEQHDIKAVTLTHNETSTGVLNP---LEGIGALAKKH 153 (356)
T ss_pred EecCCchhHHHHHHHHHhCCCeEEeecCC--CCCCCHHHHHHHHhccCCCEEEEeccCCCcccccC---HHHHHHHHHhc
Confidence 99988765 4567788899999998754 356899999999876 8899999999999999965 66778888899
Q ss_pred CcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHh---h----
Q 014603 216 GIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKS---F---- 288 (422)
Q Consensus 216 ~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~---~---- 288 (422)
|+++++|++|+. |..+.++...+.+ +++.|++|+++.| .++||++.+ +++++.+.. .
T Consensus 154 ~~~li~D~~~~~----g~~~~~~~~~~~d---~~~~s~~K~l~~p-~g~G~l~~~--------~~~~~~~~~~~~~~~~~ 217 (356)
T cd06451 154 DALLIVDAVSSL----GGEPFRMDEWGVD---VAYTGSQKALGAP-PGLGPIAFS--------ERALERIKKKTKPKGFY 217 (356)
T ss_pred CCEEEEeeehhc----cCccccccccCcc---EEEecCchhccCC-CCcceeEEC--------HHHHHHHHhcCCCCcee
Confidence 999999999864 2222233333332 6677899997654 348999986 345555542 0
Q ss_pred ---------h----hhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC--CceEEEE
Q 014603 289 ---------L----NISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPE--GSMFVMV 353 (422)
Q Consensus 289 ---------~----~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~--~g~~~~~ 353 (422)
. ...++++...+.++.++++......++...++.+++++.+.+.|+++ ++.+...+. .+.+.|+
T Consensus 218 ~~~~~~~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~ 296 (356)
T cd06451 218 FDLLLLLKYWGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEAL-GLKLLAKPELRSPTVTAV 296 (356)
T ss_pred ecHHHHHhhhcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCeeccCcccCCCceEEE
Confidence 0 12234555666777777766445667888889999999999999987 666332222 3445566
Q ss_pred ecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHHHHHHH
Q 014603 354 KLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGRMKAFY 415 (422)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~l~~~~ 415 (422)
.++.. .+..+++..+.+++||.+.+|..+..++++|+|++ ++++++++++++|++++
T Consensus 297 ~~~~~-----~~~~~~~~~L~~~~gI~~~~g~~~~~~~~iRis~~~~~~~e~v~~~~~~l~~~~ 355 (356)
T cd06451 297 LVPEG-----VDGDEVVRRLMKRYNIEIAGGLGPTAGKVFRIGHMGEATREDVLGVLSALEEAL 355 (356)
T ss_pred ECCCC-----CCHHHHHHHHHHhCCEEEecccccccCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 66532 14667777775555999999886655679999997 78999999999998876
No 126
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=100.00 E-value=6.2e-30 Score=244.56 Aligned_cols=333 Identities=16% Similarity=0.173 Sum_probs=229.6
Q ss_pred CCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCC------CCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEec
Q 014603 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARF------NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTL 117 (422)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~------~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~ 117 (422)
++..++|++++ |.++..+|.+++++.+++..... ..|+......+|++++++++ + .++.+++++
T Consensus 45 ~~~~~~~~sn~---yl~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~------g-~~~~i~~~s 114 (410)
T PRK13392 45 PRRVTIWCSND---YLGMGQHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLH------G-KESALLFTS 114 (410)
T ss_pred CceEEEEECCC---ccCCCCCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHh------C-CCCEEEECc
Confidence 45688998877 55678899999999998865321 12333224678999999998 3 234555555
Q ss_pred CHHHHHHHHHHHhcC--CCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhh----cCCceEEEEeC
Q 014603 118 GCTQAIEVILTVLAR--PGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALA----DENTVALVIIN 191 (422)
Q Consensus 118 g~~~a~~~~~~~l~~--~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~----~~~~~~i~i~~ 191 (422)
|++++..++..+.. +|+.|+++.++|..+...++..|.++..++. + |.+.+++.+ .++++++++++
T Consensus 115 -G~~a~~~~i~~l~~~~~g~~vi~~~~~h~s~~~~~~~~g~~~~~~~~---~----d~~~l~~~l~~~~~~~t~~v~i~~ 186 (410)
T PRK13392 115 -GYVSNDAALSTLGKLLPGCVILSDALNHASMIEGIRRSGAEKQVFRH---N----DLADLEEQLASVDPDRPKLIAFES 186 (410)
T ss_pred -HHHHHHHHHHHHhcCCCCCEEEEehhhhHHHHHHHHHcCCeEEEEeC---C----CHHHHHHHHHhccCCCCEEEEEeC
Confidence 56777777776643 7898888888888777777788888766542 1 333444433 34788999999
Q ss_pred CCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCC-eEEEecCccccCCCCceeEEEEee
Q 014603 192 PGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP-VLTLGSISKRWIVPGWRLGWLVTS 270 (422)
Q Consensus 192 p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~-~i~i~s~sK~~~~~G~r~G~~~~~ 270 (422)
|+||||.+++ +++|.++|+++|+++|+||+|+...++..........+..++ .++++|+||.|+++| ||++++
T Consensus 187 ~~n~tG~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~tlsK~~g~~G---G~~~~~ 260 (410)
T PRK13392 187 VYSMDGDIAP---IEAICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTLAKAFGCLG---GYIAAS 260 (410)
T ss_pred CCCCCccccc---HHHHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEEEChHhhhccc---chhhcC
Confidence 9999999975 778888899999999999999844432221111111111122 278899999998888 898875
Q ss_pred CCCCcccchhHHHHHHhhhh---hccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCC
Q 014603 271 DPNGILQDSGIVDSIKSFLN---ISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEG 347 (422)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~ 347 (422)
+++++.++.... .+...+++.++++.++|+... .....++++.++++++.+.|+++ ++. +..+.
T Consensus 261 --------~~~~~~l~~~~~~~~~s~~~~~~~~~a~~aaL~~~~--~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~- 327 (410)
T PRK13392 261 --------ADLIDFVRSFAPGFIFTTALPPAVAAGATAAIRHLK--TSQTERDAHQDRVAALKAKLNAN-GIP-VMPSP- 327 (410)
T ss_pred --------HHHHHHHHHhCcchhccCcCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHc-CCC-CCCCC-
Confidence 467776665442 233455577888888887532 23345577888999999999987 776 32344
Q ss_pred ceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC---CCeEEEEec--cChHHHHHHHHHHHHHHHHh
Q 014603 348 SMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL---KDWLRITFA--VEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 348 g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~---~~~iRis~~--~~~~~l~~~~~~l~~~~~~~ 418 (422)
+.++.+.++.. ....++..+|++++||.+.++..+.. ..++||+++ .++++++++++.|.++++++
T Consensus 328 ~~~~~i~~~~~-----~~~~~~~~~L~~~~GI~v~~~~~p~~~~~~~~lRis~~~~~t~edid~l~~aL~~~~~~~ 398 (410)
T PRK13392 328 SHIVPVMVGDP-----TLCKAISDRLMSEHGIYIQPINYPTVPRGTERLRITPTPLHDDEDIDALVAALVAIWDRL 398 (410)
T ss_pred CCEEEEEeCCH-----HHHHHHHHHHHHhCCEEEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHc
Confidence 44544444321 02456777776678999998754432 368999996 78999999999999987754
No 127
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=100.00 E-value=6.2e-30 Score=244.23 Aligned_cols=324 Identities=16% Similarity=0.172 Sum_probs=230.5
Q ss_pred ceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCC---CCCCCCC----CCHHHHHHHHHHHhhcCCCCCCCCCEEEecCH
Q 014603 47 LIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARF---NCYSSTV----GILPARRAIADYLNRDLPYKLSPDDVYLTLGC 119 (422)
Q Consensus 47 ~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~---~~y~~~~----g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~ 119 (422)
.++|+++.++ ++|+.+++++.+.+..... ..|.... ...++|+.+++++ +.++++|++++|+
T Consensus 18 ~~yl~~~~~~-----~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~------~~~~~~v~~~~~~ 86 (397)
T TIGR01976 18 RVFFDNPAGT-----QIPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLL------NADPPEVVFGANA 86 (397)
T ss_pred eEEecCCccC-----CCCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHc------CCCCCeEEEeCCH
Confidence 6999988865 5778999999888754221 1343322 2468888888888 3455679999999
Q ss_pred HHHHHHHHHHh---cCCCCEEEecCCCccch----HHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCC
Q 014603 120 TQAIEVILTVL---ARPGANILLPRPGFPYY----EARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINP 192 (422)
Q Consensus 120 ~~a~~~~~~~l---~~~gd~Vl~~~~~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p 192 (422)
+++++.++.++ .++||+|++++++|.+. ...++..|.+++.++++++ ++.+|++.+++.++++++++++++|
T Consensus 87 t~~l~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~l~~~i~~~~~lv~i~~~ 165 (397)
T TIGR01976 87 TSLTFLLSRAISRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDEA-TGELHPDDLASLLSPRTRLVAVTAA 165 (397)
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEecccc-CCCcCHHHHHHhcCCCceEEEEeCC
Confidence 99999887775 67999999999998654 3456778999999887642 3568999999999888999999999
Q ss_pred CCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCC
Q 014603 193 GNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDP 272 (422)
Q Consensus 193 ~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~ 272 (422)
+||||... ++++|.++|+++|+++|+|+++.. +.....+...+.+ +++.|++|++ |+|+|+++++
T Consensus 166 ~n~tG~~~---~~~~i~~~~~~~~~~~ivD~a~~~----~~~~~~~~~~~~d---~~~~s~~K~~---g~~~G~l~~~-- 230 (397)
T TIGR01976 166 SNTLGSIV---DLAAITELVHAAGALVVVDAVHYA----PHGLIDVQATGAD---FLTCSAYKFF---GPHMGILWGR-- 230 (397)
T ss_pred CCCCCccC---CHHHHHHHHHHcCCEEEEehhhhc----cccCCCHHHcCCC---EEEEechhhc---CCceEEEEEc--
Confidence 99999996 588888899999999999999853 3223333333332 6778999996 4568999986
Q ss_pred CCcccchhHHHHHHhhhh-----------hccCcchHHHHHHHHHHhhchHH--------------HHHHHHHHHHHHHH
Q 014603 273 NGILQDSGIVDSIKSFLN-----------ISSDPATFIQGAVPQILEKTEEE--------------FFSKITDILRETAD 327 (422)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~a~~~~l~~~~~~--------------~~~~~~~~~~~~~~ 327 (422)
+++++.+..... ..++++.....++.++++...+. ++++..++..+.++
T Consensus 231 ------~~~~~~l~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~ 304 (397)
T TIGR01976 231 ------PELLMNLPPYKLTFSYDTGPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAE 304 (397)
T ss_pred ------HHHHhhCCCccccCccCCCcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHH
Confidence 345555543211 12344544545554554432111 35667788888999
Q ss_pred HHHHHhhcCCCCCCCCCC----CCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCC-----------CCCe
Q 014603 328 ICCDRLKEIPCITCPKKP----EGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVG-----------LKDW 392 (422)
Q Consensus 328 ~l~~~L~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~-----------~~~~ 392 (422)
++++.|++++++.+. .+ ..+.++.+.++.. +..++..+| +++||.+..|..|. ..++
T Consensus 305 ~l~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~~~~------~~~~l~~~L-~~~gI~v~~~~~~~~~~~~~~~~~~~~~~ 376 (397)
T TIGR01976 305 YLLVGLSDLPGVTLY-GVARLAARVPTVSFTVHGL------PPQRVVRRL-ADQGIDAWAGHFYAVRLLRRLGLNDEGGV 376 (397)
T ss_pred HHHHHHhcCCCEEEe-CCCCccCCCceEEEEeCCc------CHHHHHHHH-HHCCeEEEeCccchHHHHHHhCCCCCCCe
Confidence 999999988767633 22 1344555555421 456666665 66799999886653 2468
Q ss_pred EEEEec--cChHHHHHHHHHH
Q 014603 393 LRITFA--VEPSALEDGLGRM 411 (422)
Q Consensus 393 iRis~~--~~~~~l~~~~~~l 411 (422)
+|||++ ++++|++++++.|
T Consensus 377 iRis~~~~~t~~di~~l~~~l 397 (397)
T TIGR01976 377 VRVGLAHYNTAEEVDRLLEAL 397 (397)
T ss_pred EEEEeeccCCHHHHHHHHHhC
Confidence 999997 7889999998764
No 128
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=100.00 E-value=6.6e-30 Score=242.33 Aligned_cols=334 Identities=15% Similarity=0.129 Sum_probs=235.4
Q ss_pred eecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCC-------CCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHH
Q 014603 49 PLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSS-------TVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ 121 (422)
Q Consensus 49 ~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~-------~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 121 (422)
+|+++..+ ++++.+.+++.+.+.....+.+.. ...+.++|+.+++++ ++++++|++|+|+|+
T Consensus 2 yld~aa~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~i~~t~~~t~ 70 (379)
T TIGR03402 2 YLDNNATT-----RVDPEVLEAMLPYFTEYFGNPSSMHSFGGEVGKAVEEAREQVAKLL------GAEPDEIIFTSGGTE 70 (379)
T ss_pred cCCCcCCC-----CCCHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCcHHH
Confidence 46666544 667899999998875421111111 112557778888887 457789999999999
Q ss_pred HHHHHHHHhc---CCCCEEEecCCCccchHH---HHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCC
Q 014603 122 AIEVILTVLA---RPGANILLPRPGFPYYEA---RATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNP 195 (422)
Q Consensus 122 a~~~~~~~l~---~~gd~Vl~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~np 195 (422)
+++.++.++. .+||+|++...+|+++.. .++..|.+++.++.++ ++.+|++.+++.++++++++++++++||
T Consensus 71 a~~~al~~~~~~~~~~~~vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~--~g~~~~~~l~~~i~~~~~lv~i~~~~n~ 148 (379)
T TIGR03402 71 SDNTAIKSALAAQPEKRHIITTAVEHPAVLSLCQHLEKQGYKVTYLPVDE--EGRLDLEELRAAITDDTALVSVMWANNE 148 (379)
T ss_pred HHHHHHHHHHHhcCCCCeEEEcccccHHHHHHHHHHHHcCCEEEEEccCC--CCcCCHHHHHHhcCCCcEEEEEEcccCC
Confidence 9999998764 456899999988876543 3344688998888753 3468999999999889999999999999
Q ss_pred cccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCc
Q 014603 196 CGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGI 275 (422)
Q Consensus 196 tG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~ 275 (422)
||.++| +++|.++|+++|+++++|++|+. |..+.++...+.| +++.|.+|.++.+| +|+++.++...
T Consensus 149 tG~~~~---~~~I~~l~~~~g~~vivD~~~~~----g~~~~~~~~~~~D---~~~~s~~K~~gp~G--~g~l~v~~~~~- 215 (379)
T TIGR03402 149 TGTIFP---IEEIGEIAKERGALFHTDAVQAV----GKIPIDLKEMNID---MLSLSGHKLHGPKG--VGALYIRKGTR- 215 (379)
T ss_pred eeeccc---HHHHHHHHHHcCCEEEEECcccc----cccccCcccCCCC---EEEEcHHHcCCCCc--eEEEEECCCCC-
Confidence 999976 56788899999999999999985 4434445544444 78888999766666 78887754221
Q ss_pred ccchhHHHHHHhhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCCCCCC---Cc-eE
Q 014603 276 LQDSGIVDSIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKE-IPCITCPKKPE---GS-MF 350 (422)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~---~g-~~ 350 (422)
. .|.+...........++++.....++.++++.. ..+++...++.+++++.+++.|++ ++++.+...+. .+ ..
T Consensus 216 ~-~p~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~-~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 293 (379)
T TIGR03402 216 F-RPLLRGGHQERGRRAGTENVPGIVGLGKAAELA-TEHLEEENTRVRALRDRLEAGLLARIPDARLNGDPTKRLPNTVN 293 (379)
T ss_pred C-CCcccCCccCCCcCCCCccHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEeCCCccCCCCEEE
Confidence 1 111110000011124577777777777777653 346778888999999999999985 77776332211 12 22
Q ss_pred EEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC-------------------CCeEEEEec--cChHHHHHHHH
Q 014603 351 VMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL-------------------KDWLRITFA--VEPSALEDGLG 409 (422)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~-------------------~~~iRis~~--~~~~~l~~~~~ 409 (422)
+++ +.. +..++...| .++||.+.+|..|.. .+.+|+|++ ++++||+++++
T Consensus 294 ~~~--~~~------~~~~~~~~l-~~~gI~v~~g~~c~~~~~~~~~~~~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~~ 364 (379)
T TIGR03402 294 ISF--EYI------EGEAILLLL-DMEGICASSGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLE 364 (379)
T ss_pred EEe--cCC------CHHHHHHhh-ccCCEEEEchhhcCCCCCCcCHHHHHcCCChhhcCceEEEEcCCCCCHHHHHHHHH
Confidence 333 221 456666654 677999999987643 268999998 78999999999
Q ss_pred HHHHHHHHhc
Q 014603 410 RMKAFYDRHA 419 (422)
Q Consensus 410 ~l~~~~~~~~ 419 (422)
.|++++++++
T Consensus 365 ~l~~~~~~~~ 374 (379)
T TIGR03402 365 VLPPIIARLR 374 (379)
T ss_pred HHHHHHHHHH
Confidence 9999987754
No 129
>PRK02948 cysteine desulfurase; Provisional
Probab=100.00 E-value=4.7e-30 Score=243.50 Aligned_cols=334 Identities=12% Similarity=0.088 Sum_probs=235.1
Q ss_pred eeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCC-------CCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHH
Q 014603 48 IPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSS-------TVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT 120 (422)
Q Consensus 48 i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~-------~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~ 120 (422)
++|+++..+ ++++.+.+++.+.+.....+.... ...+.++|+.+++++ +.++++|++++|++
T Consensus 2 ~yld~a~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~i~~~~g~t 70 (381)
T PRK02948 2 IYLDYAATT-----PMSKEALQTYQKAASQYFGNESSLHDIGGTASSLLQVCRKTFAEMI------GGEEQGIYFTSGGT 70 (381)
T ss_pred EeccCCCCC-----CCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCcHH
Confidence 678887755 567899999988776421111110 122567788888888 45788999999999
Q ss_pred HHHHHHHHHhc----CCCCEEEecCCCccchH---HHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCC
Q 014603 121 QAIEVILTVLA----RPGANILLPRPGFPYYE---ARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPG 193 (422)
Q Consensus 121 ~a~~~~~~~l~----~~gd~Vl~~~~~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~ 193 (422)
+++..++.++. ++||.|++...+|+++. ..++..|.+++.++.++ ++.+|++.+++.++++++++++++|+
T Consensus 71 ~a~~~~~~~~~~~~~~~g~~vv~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~l~~~~~lv~~~~~~ 148 (381)
T PRK02948 71 ESNYLAIQSLLNALPQNKKHIITTPMEHASIHSYFQSLESQGYTVTEIPVDK--SGLIRLVDLERAITPDTVLASIQHAN 148 (381)
T ss_pred HHHHHHHHHHHHhccCCCCEEEECCcccHHHHHHHHHHHhCCCEEEEEeeCC--CCCCCHHHHHHhcCCCCEEEEEECCc
Confidence 99999888875 57899999997776553 34566788998888753 35689999999988889999999999
Q ss_pred CCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCC
Q 014603 194 NPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPN 273 (422)
Q Consensus 194 nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~ 273 (422)
||||.++| +++|.++|+++|+++|+|+++.. |.....+...+. .+++.|+||.++.+| +|++++++..
T Consensus 149 n~tG~~~~---~~~I~~l~~~~~~~vivD~~~~~----g~~~~~~~~~~~---d~~~~s~~K~~gp~G--~G~l~~~~~~ 216 (381)
T PRK02948 149 SEIGTIQP---IAEIGALLKKYNVLFHSDCVQTF----GKLPIDVFEMGI---DSLSVSAHKIYGPKG--VGAVYINPQV 216 (381)
T ss_pred CCcEeehh---HHHHHHHHHHcCCEEEEEChhhc----cccccCcccCCC---CEEEecHHhcCCCCc--EEEEEEcCCC
Confidence 99999964 67888889999999999988765 222223333333 388899999988888 7888875321
Q ss_pred CcccchhHHH-HHHhhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCc----
Q 014603 274 GILQDSGIVD-SIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGS---- 348 (422)
Q Consensus 274 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g---- 348 (422)
... .... .........++++.+.+.++.++++... +++++.+++++++++++.+.|+++ ++.+.......
T Consensus 217 ~~~---~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~-~~~~~~~~~~~~~~~~l~~~L~~~-~~~v~~~~~~~~~~~ 291 (381)
T PRK02948 217 RWK---PVFPGTTHEKGFRPGTVNVPGIAAFLTAAENIL-KNMQEESLRFKELRSYFLEQIQTL-PLPIEVEGHSTSCLP 291 (381)
T ss_pred CCC---CcccCCCCCCCcCCCCccHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcC-CCCEEEeCCCccCcC
Confidence 000 0000 0000111235788888888888887532 467888899999999999999988 44422111111
Q ss_pred eEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC-------------------CCeEEEEec--cChHHHHHH
Q 014603 349 MFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL-------------------KDWLRITFA--VEPSALEDG 407 (422)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~-------------------~~~iRis~~--~~~~~l~~~ 407 (422)
.++.+.++. . +..++...+ .++||.+.+|..|.. .+++|||++ ++++|++++
T Consensus 292 ~i~~~~~~~-----~-~~~~~~~~l-~~~gI~v~~g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~l 364 (381)
T PRK02948 292 HIIGVTIKG-----I-EGQYTMLEC-NRRGIAISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTT 364 (381)
T ss_pred CEEEEEeCC-----C-CHHHHHHhc-ccCCEEEEchHhcCCCCCCCCHHHHHcCCChHHhCceEEEEcCCCCCHHHHHHH
Confidence 112122221 1 355565554 677999998875421 368999998 789999999
Q ss_pred HHHHHHHHHHh
Q 014603 408 LGRMKAFYDRH 418 (422)
Q Consensus 408 ~~~l~~~~~~~ 418 (422)
++.|+++++++
T Consensus 365 ~~~l~~~~~~~ 375 (381)
T PRK02948 365 IHALETIGNQF 375 (381)
T ss_pred HHHHHHHHHHH
Confidence 99999988765
No 130
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.98 E-value=3e-29 Score=238.63 Aligned_cols=337 Identities=14% Similarity=0.157 Sum_probs=237.8
Q ss_pred cCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCC--CCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCH
Q 014603 42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSA--RFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGC 119 (422)
Q Consensus 42 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~ 119 (422)
-+|+.+|||+.+++ ++++++|.+.+++.+++... ....|....|..++++.+++++.+..+ .++.+++++|
T Consensus 30 ~~g~~~id~~~~~~---~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~g---~~~~i~~~sG- 102 (385)
T TIGR01825 30 VNGKEVINLSSNNY---LGFADHPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAKFKK---TEAALVFQSG- 102 (385)
T ss_pred ECCceEEEeeccCc---cCCCCCHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHHHhC---CCcEEEECcH-
Confidence 36889999998862 34778899999999988642 223566777889999999999988665 2345666666
Q ss_pred HHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC----CceEEEEeCCCCC
Q 014603 120 TQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE----NTVALVIINPGNP 195 (422)
Q Consensus 120 ~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~----~~~~i~i~~p~np 195 (422)
++++..++.+++++||.|+++.|+|..+...+...+.++..++ .+|++.+++.+.+ +++++++.+++||
T Consensus 103 ~~a~~~a~~~~~~~gd~vi~~~~~~~~~~~~~~~~g~~~~~~~-------~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~ 175 (385)
T TIGR01825 103 FNTNQGVLSALLRKGDIVLSDELNHASIIDGLRLTKATKKIYK-------HADMDDLDRVLRENPSYGKKLIVTDGVFSM 175 (385)
T ss_pred HHHHHHHHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEeC-------CCCHHHHHHHHHhhccCCCeEEEEecCCcC
Confidence 6677788888899999999999999988777777777765543 2677777776543 5777777777999
Q ss_pred cccccCHHHHHHHHHHHHHcCcEEEEcccccccccC--CCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCC
Q 014603 196 CGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFG--NTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPN 273 (422)
Q Consensus 196 tG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~--~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~ 273 (422)
||.+.+ +++|.++|++||+++|+||+|+.+.+. +........+. .+.++++.|+||+|+++| ||++++
T Consensus 176 tG~~~~---~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~g---G~~~~~--- 245 (385)
T TIGR01825 176 DGDVAP---LPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLE-DKVDIQVGTLSKAIGVVG---GYAAGH--- 245 (385)
T ss_pred CCCccC---HHHHHHHHHHhCCEEEEECcccccCcCCCCCccHhhcCCC-cCCcEEEEeccHHhhcCC---CEEecC---
Confidence 999854 788999999999999999999765443 21111111122 245789999999997666 998875
Q ss_pred CcccchhHHHHHHhhhh-h--ccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceE
Q 014603 274 GILQDSGIVDSIKSFLN-I--SSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMF 350 (422)
Q Consensus 274 ~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~ 350 (422)
+++++.+..... . ....++..+.++.++++...+ ..+..+++.++++.+.+.|+++ ++. +..|... +
T Consensus 246 -----~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~--~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~-~ 315 (385)
T TIGR01825 246 -----KELIEYLKNRARPFLFSTAQPPAVVAALAAAVDELQR--SPELMERLWDNTRFFKAGLGKL-GYD-TGGSETP-I 315 (385)
T ss_pred -----HHHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHc-CCC-CCCCCCC-E
Confidence 467777755432 1 223455667777777764211 1245666778889999999887 776 3345443 4
Q ss_pred EEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCC---CCCeEEEEec--cChHHHHHHHHHHHHHHHHh
Q 014603 351 VMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVG---LKDWLRITFA--VEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~---~~~~iRis~~--~~~~~l~~~~~~l~~~~~~~ 418 (422)
+++.++.. .+..++...++++ ||.+.++.... ..+++|++++ ++++++++++++|++++++.
T Consensus 316 ~~~~~~~~-----~~~~~~~~~L~~~-gi~v~~~~~~~~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~~~~~ 382 (385)
T TIGR01825 316 TPVVIGDE-----KAAQEFSRRLFDE-GIFAQSIVFPTVPRGTARIRNIPTAEHTKDDLDQALDAYEKVGKEL 382 (385)
T ss_pred EEEEECCH-----HHHHHHHHHHHHC-CcEEcccCCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHHHHHh
Confidence 44444321 1245677777665 99985433322 1368999886 79999999999999988654
No 131
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.98 E-value=2.3e-29 Score=239.69 Aligned_cols=330 Identities=16% Similarity=0.135 Sum_probs=228.4
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCC--CCCCCCCCC----CHHHHHHHHHHHhhcCCCCCCCCCEEEe
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSAR--FNCYSSTVG----ILPARRAIADYLNRDLPYKLSPDDVYLT 116 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~y~~~~g----~~~lr~~ia~~l~~~~~~~~~~~~i~~~ 116 (422)
+|..+|||+.+++ +++.++|++.+++.+++.... ...|....+ ..++++.+++++ + .+ ..+++
T Consensus 37 ~g~~~id~~~~~~---~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----~---~~-~~i~~ 105 (385)
T PRK05958 37 DGRRMLNFASNDY---LGLARHPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELAEWF----G---AE-RALLF 105 (385)
T ss_pred CCceEEEeeCCCc---ccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHh----C---CC-cEEEE
Confidence 6899999999862 345677899999999886521 112222223 455666666665 2 23 44555
Q ss_pred cCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCC---ceEEEEeCCC
Q 014603 117 LGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADEN---TVALVIINPG 193 (422)
Q Consensus 117 ~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~---~~~i~i~~p~ 193 (422)
+++++++..++..++++||.|+++.|+|..+...+...|.+++.++. .|++.+++.+++. +.++++.+++
T Consensus 106 ~~g~~~~~~~l~~~~~~gd~V~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~i~~~~~~~~lvi~~~~~ 178 (385)
T PRK05958 106 SSGYAANLAVLTALAGKGDLIVSDKLNHASLIDGARLSRARVRRYPH-------NDVDALEALLAKWRAGRALIVTESVF 178 (385)
T ss_pred CcHHHHHHHHHHHhCCCCCEEEEeCccCHHHHHHHHhcCCceEEeCC-------CCHHHHHHHHHhccCCCeEEEEEecc
Confidence 55667777777888999999999999999988888888888877653 3778888877542 4445555678
Q ss_pred CCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccC--CCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeC
Q 014603 194 NPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFG--NTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD 271 (422)
Q Consensus 194 nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~--~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~ 271 (422)
|++|.. .++++|.++|+++|+++|+||+|+.+.+. +........+...++++++.|+||+|+.+| ||++++
T Consensus 179 ~~~G~~---~~l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G---g~~~~~- 251 (385)
T PRK05958 179 SMDGDL---APLAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKALGSSG---AAVLGS- 251 (385)
T ss_pred cCCCCc---CCHHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEechhhcccCC---cEEEcC-
Confidence 999988 45889999999999999999999764432 222211112333456799999999997777 888875
Q ss_pred CCCcccchhHHHHHHhhh-h--hccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCc
Q 014603 272 PNGILQDSGIVDSIKSFL-N--ISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGS 348 (422)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g 348 (422)
+++.+.+.... . ....+++..+.++.++++.... . ....+++.++++.+.+.|+++ ++. +..+ .+
T Consensus 252 -------~~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~~-~-~~~~~~~~~~~~~l~~~L~~~-~~~-~~~~-~~ 319 (385)
T PRK05958 252 -------ETLIDYLINRARPFIFTTALPPAQAAAARAALRILRR-E-PERRERLAALIARLRAGLRAL-GFQ-LMDS-QS 319 (385)
T ss_pred -------HHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhc-C-HHHHHHHHHHHHHHHHHHHHc-CCC-cCCC-CC
Confidence 45666654332 1 1224555666666677764321 1 456788889999999999987 566 3244 45
Q ss_pred eEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCC---CCCeEEEEec--cChHHHHHHHHHHHHHH
Q 014603 349 MFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVG---LKDWLRITFA--VEPSALEDGLGRMKAFY 415 (422)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~---~~~~iRis~~--~~~~~l~~~~~~l~~~~ 415 (422)
.++++.++.. .++.++...+ .++||.+.++..+. .++++||+++ ++++++++++++|++++
T Consensus 320 ~~~~~~~~~~-----~~~~~~~~~l-~~~gI~v~~~~~~~~~~~~~~lRis~~~~~~~~~i~~~l~~l~~~~ 385 (385)
T PRK05958 320 AIQPLIVGDN-----ERALALAAAL-QEQGFWVGAIRPPTVPAGTSRLRITLTAAHTEADIDRLLEALAEAL 385 (385)
T ss_pred CEEEEEeCCH-----HHHHHHHHHH-HHCCceEecccCCCCCCCCceEEEEecCCCCHHHHHHHHHHHHhcC
Confidence 5777777531 1345676666 55699998854432 1468999998 68999999999998753
No 132
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.98 E-value=1.9e-29 Score=239.34 Aligned_cols=338 Identities=14% Similarity=0.100 Sum_probs=239.8
Q ss_pred eeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCC-----CCCCCCCCHHHHHHHHHHHhhcCCCCC-CCCCEEEecCHHH
Q 014603 48 IPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFN-----CYSSTVGILPARRAIADYLNRDLPYKL-SPDDVYLTLGCTQ 121 (422)
Q Consensus 48 i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~-----~y~~~~g~~~lr~~ia~~l~~~~~~~~-~~~~i~~~~g~~~ 121 (422)
|+|+++..+ ++++.+++++.+.+.....+ .|+ ..+...+++++++++.. . +. ++++|++|+|+++
T Consensus 1 ~yld~aa~~-----~~~~~v~~~~~~~~~~~~~n~~~~~~~~-~~~~~~l~~a~~~~~~~-~--~~~~~~~i~~t~g~te 71 (382)
T TIGR03403 1 VYLDNNATT-----MLDPKVKELMDPFFCDIYGNPNSLHQFG-TATHPAIAEALDKLYKG-I--NARDLDDIIITSCATE 71 (382)
T ss_pred CcccCcCCC-----CCCHHHHHHHHHHHHhcCcCCccccHHH-HHHHHHHHHHHHHHHHH-c--CcCCCCeEEEeCCHHH
Confidence 356666655 56688999999888653222 222 13456778887777743 2 33 6789999999999
Q ss_pred HHHHHHHHhc-----CC-CCEEEecCCCccchHH---HHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCC
Q 014603 122 AIEVILTVLA-----RP-GANILLPRPGFPYYEA---RATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINP 192 (422)
Q Consensus 122 a~~~~~~~l~-----~~-gd~Vl~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p 192 (422)
+++.+++++. ++ +++|+++..+|+++.. .++..|.+++.+++++ ++.+|++.+++.++++++++++++|
T Consensus 72 al~~~~~~~~~~~~~~~~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~~~--~g~~d~~~l~~~i~~~t~lv~~~~~ 149 (382)
T TIGR03403 72 SNNWVLKGVYFDEILKGGKNHIITTEVEHPAVRATCAFLESLGVEVTYLPINE--QGTITAEQVREAITEKTALVSVMWA 149 (382)
T ss_pred HHHHHHHHHHHhhcccCCCCEEEEcCCccHHHHHHHHHHHHCCCEEEEEecCC--CCCCCHHHHHHhcccCCeEEEEEcc
Confidence 9999998752 45 4789999877766543 3456789999998753 3468999999999888999999999
Q ss_pred CCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCC
Q 014603 193 GNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDP 272 (422)
Q Consensus 193 ~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~ 272 (422)
+||||.+++ +++|.++|+++|+++++|++++. |..+.++...+.| +++.|++|+++.+| +|++++++.
T Consensus 150 ~n~tG~~~~---~~~I~~la~~~g~~~ivD~a~~~----g~~~~~~~~~~~D---~~~~s~~K~~gp~G--~g~l~vr~~ 217 (382)
T TIGR03403 150 NNETGMIFP---IKEIGEICKERGVLFHTDAVQAI----GKIPVDVQKAGVD---FLSFSAHKFHGPKG--VGGLYIRKG 217 (382)
T ss_pred cCCCccccC---HHHHHHHHHHcCCEEEEechhhc----CCCccCccccCCC---EEEEcchhhCCCCc--eEEEEECCC
Confidence 999999976 56788888899999999999875 3222333333333 88889999887778 688877543
Q ss_pred CCcccchhHHHHHHhhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC---Cce
Q 014603 273 NGILQDSGIVDSIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPE---GSM 349 (422)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~---~g~ 349 (422)
.... +.+...........++++...+.++..+++.. .++++...++++++++++.+.|++++++.+. .+. .+.
T Consensus 218 ~~~~--p~~~g~~~~~~~~~gt~~~~~~~al~~al~~~-~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~-~~~~~~~~~ 293 (382)
T TIGR03403 218 VELT--PLFHGGEHMGGRRSGTLNVPYIVAMGEAMRLA-NEYLDFEKSHVRRLRDRLEDALLELPDVFVV-GDREHRVPN 293 (382)
T ss_pred CCCC--CcccCCCCCCCcccCCcChHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHhcCCCEEEE-CCCCCCcCC
Confidence 2111 11100000001124578888888888888753 3457778889999999999999998888743 332 133
Q ss_pred EEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC-------------------CCeEEEEec--cChHHHHHHH
Q 014603 350 FVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL-------------------KDWLRITFA--VEPSALEDGL 408 (422)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~-------------------~~~iRis~~--~~~~~l~~~~ 408 (422)
++.+.++.. +..++...| .++||.+..|..|.. .+.+|+|++ ++++|+++++
T Consensus 294 ~~~~~~~~~------~~~~~~~~L-~~~gI~v~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~~~~~t~~did~~~ 366 (382)
T TIGR03403 294 TILISIKGV------EGEAMLWDL-NKAGIAASTGSACASEDLEANPVMVAIGADKELAHTAIRLSLSRFTTEEEIDYTI 366 (382)
T ss_pred EEEEEeCCC------CHHHHHHhh-ccCCEEEEchhccCCCCCCcCHHHHHcCCChHHhCeeEEEECCCCCCHHHHHHHH
Confidence 555555421 456666664 677999998876631 257999998 7899999999
Q ss_pred HHHHHHHHHhc
Q 014603 409 GRMKAFYDRHA 419 (422)
Q Consensus 409 ~~l~~~~~~~~ 419 (422)
+.|++++++++
T Consensus 367 ~~l~~~~~~~~ 377 (382)
T TIGR03403 367 EVFKKAVQRLR 377 (382)
T ss_pred HHHHHHHHHHH
Confidence 99999887754
No 133
>PLN02483 serine palmitoyltransferase
Probab=99.98 E-value=3.2e-29 Score=242.14 Aligned_cols=336 Identities=15% Similarity=0.108 Sum_probs=229.8
Q ss_pred CCCceeecCCCCCCCCCCCC-----cHHHHHHHHHHhhC--CCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEe
Q 014603 44 TRPLIPLGHGDPSAFPSFRT-----ASVAVDAIVHSVRS--ARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLT 116 (422)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~-----~~~v~~a~~~~~~~--~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~ 116 (422)
...++||++.+ |.++.. .+.+.+++.+.-.. ..-..|++...+.++++++|++++ .++.++++
T Consensus 99 ~~~~~n~~s~~---YLgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~g-------~~~ai~~~ 168 (489)
T PLN02483 99 TRRCLNLGSYN---YLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFVG-------KPAAIVFG 168 (489)
T ss_pred CceEEEeecCC---ccCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHhC-------CCcEEEEC
Confidence 56689999887 445442 34555555554322 111247777789999999999994 34556665
Q ss_pred cCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhc-------CC-----c
Q 014603 117 LGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALAD-------EN-----T 184 (422)
Q Consensus 117 ~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-------~~-----~ 184 (422)
+ |..++..++.+++++||.|++++++|.++...++..|++++.++.+ |++.+++.++ ++ .
T Consensus 169 ~-G~~an~~~i~al~~~Gd~Vi~d~~~h~s~~~~~~~~Ga~v~~~~~~-------d~~~le~~l~~~i~~~~p~t~~p~~ 240 (489)
T PLN02483 169 M-GYATNSTIIPALIGKGGLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPWK 240 (489)
T ss_pred C-HHHHHHHHHHHhCCCCCEEEEcchhhHHHHHHHHHcCCeEEEEeCC-------CHHHHHHHHHhhhhccccccccCCc
Confidence 5 5666667888899999999999999999999999999999888753 3444444332 22 2
Q ss_pred eEEEEeCC-CCCcccccCHHHHHHHHHHHHHcCcEEEEccccccccc--CCCCCCCccccCCCCCeEEEecCccccCCCC
Q 014603 185 VALVIINP-GNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAF--GNTPFVPMGVFGSIVPVLTLGSISKRWIVPG 261 (422)
Q Consensus 185 ~~i~i~~p-~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~--~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G 261 (422)
++++++++ .|++|.+ .++++|+++|+++|++||+||+|+.... +|.....+..+...+..++++||||+|++.|
T Consensus 241 k~livve~v~s~~G~~---~~l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~g~~G 317 (489)
T PLN02483 241 KIIVIVEGIYSMEGEL---CKLPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFGSCG 317 (489)
T ss_pred eEEEEECCCCCCCCcc---cCHHHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCCCcccCcEEEEecchhcccCc
Confidence 55666666 6899998 5788899999999999999999984332 2222222223333345699999999998877
Q ss_pred ceeEEEEeeCCCCcccchhHHHHHHhhhh---hccCcchHHHHHHHHHHhhch----HHHHHHHHHHHHHHHHHHHHHhh
Q 014603 262 WRLGWLVTSDPNGILQDSGIVDSIKSFLN---ISSDPATFIQGAVPQILEKTE----EEFFSKITDILRETADICCDRLK 334 (422)
Q Consensus 262 ~r~G~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~a~~~~l~~~~----~~~~~~~~~~~~~~~~~l~~~L~ 334 (422)
||++++ +++++.+..... .....++....++.++|+... .....+.+++++++++.+++.|+
T Consensus 318 ---G~i~~~--------~~li~~l~~~~~~~~~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~ 386 (489)
T PLN02483 318 ---GYIAGS--------KELIQYLKRTCPAHLYATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFFRSELQ 386 (489)
T ss_pred ---eEEEcC--------HHHHHHHHHhCccccccCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHH
Confidence 999875 568888876532 122333344434455554211 23345567889999999999999
Q ss_pred cCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC---CCeEEEEec--cChHHHHHHHH
Q 014603 335 EIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL---KDWLRITFA--VEPSALEDGLG 409 (422)
Q Consensus 335 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~---~~~iRis~~--~~~~~l~~~~~ 409 (422)
++ ++. +..+.++...++.+.... ...++...+++ +||.+.+..++.. .+.+|++++ +++++|+++++
T Consensus 387 ~~-G~~-v~~~~~sp~~~l~l~~~~-----~~~~~~~~Ll~-~GI~v~~~~fp~~p~~~~~vRi~isa~~t~edId~~l~ 458 (489)
T PLN02483 387 KM-GFE-VLGDNDSPVMPIMLYNPA-----KIPAFSRECLK-QNVAVVVVGFPATPLLLARARICISASHSREDLIKALE 458 (489)
T ss_pred HC-CCc-ccCCCCCCEEEEEECCHH-----HHHHHHHHHHH-CCcEEeeeCCCCCCCCCceEEEEeCCCCCHHHHHHHHH
Confidence 98 666 334555556666553211 24466677655 5999997433222 368999997 68999999999
Q ss_pred HHHHHHHHhc
Q 014603 410 RMKAFYDRHA 419 (422)
Q Consensus 410 ~l~~~~~~~~ 419 (422)
+|.++++.+.
T Consensus 459 ~L~~~~~~~~ 468 (489)
T PLN02483 459 VISEVGDLVG 468 (489)
T ss_pred HHHHHHHHhC
Confidence 9999987653
No 134
>PRK07179 hypothetical protein; Provisional
Probab=99.98 E-value=6.9e-29 Score=237.11 Aligned_cols=332 Identities=14% Similarity=0.125 Sum_probs=231.0
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCC-----CCCC-CCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEe
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSAR-----FNCY-SSTVGILPARRAIADYLNRDLPYKLSPDDVYLT 116 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~-----~~~y-~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~ 116 (422)
.+..++||+..+ |.++..+|++++++.+++.... ...+ .......++++.++++++ .+.++++
T Consensus 52 ~g~~~~~~~~~~---YL~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g--------~~~~~~~ 120 (407)
T PRK07179 52 PGPDAIILQSND---YLNLSGHPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAFTG--------FESCLLC 120 (407)
T ss_pred CCCcEEEeecCC---ccCCCCCHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHHHhC--------CCcEEEE
Confidence 356678998877 6677889999999999986421 1111 112245788888998882 2467889
Q ss_pred cCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC-CceEEEEeCCCCC
Q 014603 117 LGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE-NTVALVIINPGNP 195 (422)
Q Consensus 117 ~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~i~~p~np 195 (422)
+||++|+..+++++..+||.|++..++|.+....+...|.+++.++. .|++.+++.+++ +++++++++++||
T Consensus 121 ~sG~~An~~~l~~l~~~g~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~lV~v~~v~n~ 193 (407)
T PRK07179 121 QSGWAANVGLLQTIADPNTPVYIDFFAHMSLWEGVRAAGAQAHPFRH-------NDVDHLRRQIERHGPGIIVVDSVYST 193 (407)
T ss_pred CCHHHHHHHHHHHhCCCCCEEEEECCcCHHHHHHHHHCCCeEEEecC-------CCHHHHHHHHHhcCCeEEEECCCCCC
Confidence 99999999999999999999999999998887777778877655432 488999998865 4677888889999
Q ss_pred cccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCC-eEEEecCccccCCCCceeEEEEeeCCCC
Q 014603 196 CGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP-VLTLGSISKRWIVPGWRLGWLVTSDPNG 274 (422)
Q Consensus 196 tG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~-~i~i~s~sK~~~~~G~r~G~~~~~~~~~ 274 (422)
+|.++| +++|.++|+++|+++|+||+|+...++..+...+..++..+. .+++.|+||.++ .|+|+++++
T Consensus 194 tG~i~p---l~~I~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~~g---~~~G~l~~~---- 263 (407)
T PRK07179 194 TGTIAP---LADIVDIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAFA---GRAGIITCP---- 263 (407)
T ss_pred CCcccc---HHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEeechHhhh---ccCeEEEeC----
Confidence 999976 678888999999999999999854332221111223332222 388899999975 368999985
Q ss_pred cccchhHHHHHHhhhh---hccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEE
Q 014603 275 ILQDSGIVDSIKSFLN---ISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFV 351 (422)
Q Consensus 275 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~ 351 (422)
+++++.+..... ..++.++...+++.++++.. ......+++++++++++.+.|+++ ++. +. ..+.++
T Consensus 264 ----~~~~~~~~~~~~~~~~~~t~~~~~~aa~~aal~~~--~~~~~~~~~l~~~~~~l~~~L~~~-g~~-v~--~~~~i~ 333 (407)
T PRK07179 264 ----RELAEYVPFVSYPAIFSSTLLPHEIAGLEATLEVI--ESADDRRARLHANARFLREGLSEL-GYN-IR--SESQII 333 (407)
T ss_pred ----HHHHHHHHHhCcCeeeCCCCCHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHc-CCC-CC--CCCCEE
Confidence 356665543321 22333444444454555542 223456788999999999999988 776 32 235677
Q ss_pred EEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCC---CCCeEEEEec--cChHHHHHHHHHHHHHHHHh
Q 014603 352 MVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVG---LKDWLRITFA--VEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~---~~~~iRis~~--~~~~~l~~~~~~l~~~~~~~ 418 (422)
++.++.. ...+.+...+.++||.+..-.... ..+.+||+++ +++++++++++.|++++++.
T Consensus 334 ~l~~~~~------~~~~~~~~~L~~~GI~~~~~~~p~~~~~~~~lRis~~~~~t~edi~~~~~~l~~~~~~~ 399 (407)
T PRK07179 334 ALETGSE------RNTEVLRDALEERNVFGAVFCAPATPKNRNLIRLSLNADLTASDLDRVLEVCREARDEV 399 (407)
T ss_pred EEEeCCH------HHHHHHHHHHHHCCceEeeecCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhh
Confidence 7766431 122334444566799743211111 2478999998 78999999999999998775
No 135
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.98 E-value=4.7e-29 Score=238.01 Aligned_cols=333 Identities=17% Similarity=0.170 Sum_probs=232.5
Q ss_pred CCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCC------CCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEec
Q 014603 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFN------CYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTL 117 (422)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~------~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~ 117 (422)
++.+++|++++ |.++..+|++++++.+++...... .|.......+|++.++++++ .+..++++
T Consensus 44 ~~~~~~~~sn~---ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~g--------~~~~l~~~ 112 (402)
T TIGR01821 44 AKDVTVWCSND---YLGMGQHPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLHG--------KESALVFT 112 (402)
T ss_pred CeeEEEeEccC---cCCCCCCHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHhC--------CCeEEEEC
Confidence 47789999988 778889999999999998763221 12223345788888888882 23567777
Q ss_pred CHHHHHHHHHHHhcC--CCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhc---C-CceEEEEeC
Q 014603 118 GCTQAIEVILTVLAR--PGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALAD---E-NTVALVIIN 191 (422)
Q Consensus 118 g~~~a~~~~~~~l~~--~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~---~-~~~~i~i~~ 191 (422)
+|++|+..++..+.. +++.|+.....|......+...|.++..++. .|++.+++.++ + +++++++++
T Consensus 113 sG~~an~~ai~~l~~~~~~~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~v~~e~ 185 (402)
T TIGR01821 113 SGYVANDATLATLAKIIPGCVIFSDELNHASMIEGIRHSGAEKFIFRH-------NDVAHLEKLLQSVDPNRPKIIAFES 185 (402)
T ss_pred chHHHHHHHHHHhhCCCCCCEEEEcchHhHHHHHHHHHcCCeEEEECC-------CCHHHHHHHHHhccCCCCeEEEEcC
Confidence 779999999888765 6777777766776666677777777655432 25566666554 2 578889999
Q ss_pred CCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCC-CCCeEEEecCccccCCCCceeEEEEee
Q 014603 192 PGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IVPVLTLGSISKRWIVPGWRLGWLVTS 270 (422)
Q Consensus 192 p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~-~~~~i~i~s~sK~~~~~G~r~G~~~~~ 270 (422)
|+||+|.+.+ +++|.++|+++|+++|+||+|+...++..........+. ++..++++|+||.|+++| ||++++
T Consensus 186 ~~~~~G~~~~---l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G---G~i~~~ 259 (402)
T TIGR01821 186 VYSMDGDIAP---IEEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAFGVVG---GYIAAS 259 (402)
T ss_pred CCCCCCCccC---HHHHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCCCCCeEEEEechhhhccCC---ceeecC
Confidence 9999999965 788888999999999999999844332211111111121 122478899999998888 898875
Q ss_pred CCCCcccchhHHHHHHhhhh---hccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCC
Q 014603 271 DPNGILQDSGIVDSIKSFLN---ISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEG 347 (422)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~ 347 (422)
+++++.+..... ++.+.++..++++.++|+...+. ....+++.++++++.+.|+++ ++. ...+.
T Consensus 260 --------~~~~~~l~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~~--~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~- 326 (402)
T TIGR01821 260 --------RKLIDAIRSYAPGFIFTTSLPPAIAAGATASIRHLKES--QDLRRAHQENVKRLKNLLEAL-GIP-VIPNP- 326 (402)
T ss_pred --------HHHHHHHHHhCcCceecCcCCHHHHHHHHHHHHHhhcC--HHHHHHHHHHHHHHHHHHHHc-CCC-cCCCC-
Confidence 467777764332 23356677788888888753221 445566678888999999887 666 32343
Q ss_pred ceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC---CCeEEEEec--cChHHHHHHHHHHHHHHHHh
Q 014603 348 SMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL---KDWLRITFA--VEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 348 g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~---~~~iRis~~--~~~~~l~~~~~~l~~~~~~~ 418 (422)
+.++.+.++.. ....++...+++++||.+.+...+.. .+++||+++ +++++++++++.|+++++++
T Consensus 327 ~~i~~i~~~~~-----~~a~~~~~~L~~~~Gi~v~~~~~p~~~~g~~~lRis~~~~~t~edi~~~~~~l~~~~~~~ 397 (402)
T TIGR01821 327 SHIVPVIIGDA-----ALCKKVSDLLLNKHGIYVQPINYPTVPRGTERLRITPTPAHTDKMIDDLVEALLLVWDRL 397 (402)
T ss_pred CCEEEEEeCCH-----HHHHHHHHHHHhcCCEEEEeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Confidence 55655555421 02456666666677999988654433 368999997 78999999999999998764
No 136
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.97 E-value=2.8e-29 Score=238.27 Aligned_cols=335 Identities=14% Similarity=0.141 Sum_probs=230.2
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCC--CCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSAR--FNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT 120 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~ 120 (422)
+|..+|||..|.+..+.+ +.+|.+.+++.+++.... ...|+ .....++++++++++ ..+++++++||+
T Consensus 25 ~g~~~id~~~~~~~~~lG-~~~p~v~~a~~~~~~~~~~~~~~~~-~~~~~~l~~~la~~~--------g~~~~~~~~sg~ 94 (379)
T TIGR00707 25 NGKEYLDFVAGIAVNSLG-HAHPKLVEALKEQLEKLVHVSNLYY-TEPQEELAEKLVEHS--------GADRVFFCNSGA 94 (379)
T ss_pred CCCEEEEcCcchhhccCC-CCCHHHHHHHHHHHhhccccccccC-CHHHHHHHHHHHhhC--------CCCEEEEeCCcH
Confidence 588899999986554333 356899999999887531 12332 233456666666665 235999999999
Q ss_pred HHHHHHHHHhc---C----CCCEEEecCCCccchHHHHhhCCCeEEE----eeccCCCCcc--cCHHHHHHhhcCCceEE
Q 014603 121 QAIEVILTVLA---R----PGANILLPRPGFPYYEARATHSHLEVRH----FDLLPAKGWE--VDLDAVEALADENTVAL 187 (422)
Q Consensus 121 ~a~~~~~~~l~---~----~gd~Vl~~~~~~~~~~~~~~~~g~~~~~----~~~~~~~~~~--~d~~~l~~~~~~~~~~i 187 (422)
+++..+++.+. . ++|+|++++|+|+++...+...+..... .++..+..+. .|++.+++.++++++++
T Consensus 95 ~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v 174 (379)
T TIGR00707 95 EANEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYAPYNDIESLKKAIDDETAAV 174 (379)
T ss_pred HHHHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceeeCCCCHHHHHHHhhhCeeEE
Confidence 99999988652 2 3799999999999887666655443211 1221111111 17899999888788888
Q ss_pred EEeCCCCCcccc-cCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEE
Q 014603 188 VIINPGNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGW 266 (422)
Q Consensus 188 ~i~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~ 266 (422)
+++.++|++|.. ++.+++++|.++|+++|+++|+||+|.++.+.|.. .++...+..+++ .++||.++ +|+|+||
T Consensus 175 ~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~~-~~~~~~~~~~d~---~t~sK~~~-~G~riG~ 249 (379)
T TIGR00707 175 IVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGKF-FAYEHYGIEPDI---ITLAKGLG-GGVPIGA 249 (379)
T ss_pred EEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchh-hhHHhcCCCCCE---EEEccccc-CCcccEE
Confidence 886556777764 68999999999999999999999999877665532 222222222333 36799987 9999999
Q ss_pred EEeeCCCCcccchhHHHHHHhhh-hhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 014603 267 LVTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIP-CITCPKK 344 (422)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~ 344 (422)
++++ +++++.+.... ....+.+++.++++.++|+... ..+..++++++++.+++.|+++. .......
T Consensus 250 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~aa~aaL~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 318 (379)
T TIGR00707 250 TLAK--------EEVAEAFTPGDHGSTFGGNPLACAAALAVLEVIE---KERLLENVKEKGDYFKERLEELGKNYPNKEV 318 (379)
T ss_pred EEEc--------HHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHH---hhhHHHHHHHHHHHHHHHHHHHHhhCCCCcc
Confidence 9986 46777776532 2334568889999998887532 12355666677777777776541 1110112
Q ss_pred CCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHHHHHHH
Q 014603 345 PEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGRMKAFY 415 (422)
Q Consensus 345 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~l~~~~ 415 (422)
+..|.++|+.++. +..++.+.+ .++||.+.|+. .+++|++++ .+++++++++++|++++
T Consensus 319 ~~~g~~~~~~~~~-------~~~~~~~~l-~~~Gv~v~~~~----~~~lRi~~~~~~t~~~i~~~~~~l~~~~ 379 (379)
T TIGR00707 319 RGKGLMLGIELEA-------PCKDIVKKA-LEKGLLVNCAG----PKVLRFLPPLIITKEEIDEAVSALEEAI 379 (379)
T ss_pred ccCceEEEEEecC-------cHHHHHHHH-HHCCcEEeeCC----CCEEEEECCCcCCHHHHHHHHHHHHHhC
Confidence 3457788888763 345666654 66799999853 478999985 68999999999998753
No 137
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.97 E-value=1.5e-29 Score=241.32 Aligned_cols=342 Identities=14% Similarity=0.136 Sum_probs=234.8
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCC--CCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSAR--FNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT 120 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~ 120 (422)
+|+.++||..|.+....+ +.+|.+.+++.+++.+.. ...|.... ..++.+.+++++ + ...++++++++|++
T Consensus 41 dg~~~lD~~s~~~~~~lG-~~~p~v~~ai~~~~~~~~~~~~~~~~~~-~~~la~~l~~~~----~-~~~~~~v~~~~sgs 113 (398)
T PRK03244 41 DGKEYLDLLGGIAVNALG-HAHPAVVEAVTRQLATLGHVSNLFATEP-QIALAERLVELL----G-APEGGRVFFCNSGA 113 (398)
T ss_pred CCCEEEECCcCHhhccCC-CCCHHHHHHHHHHHHhccCccCccCCHH-HHHHHHHHHHhC----C-CCCCCEEEEeCchH
Confidence 688899999887653333 247999999999987632 23454432 245555555554 2 12357999999999
Q ss_pred HHHHHHHHHhcCCC-CEEEecCCCccchHHHHhhC-CCeEEEeeccCC-CC-c---ccCHHHHHHhhcCCceEEEEeCCC
Q 014603 121 QAIEVILTVLARPG-ANILLPRPGFPYYEARATHS-HLEVRHFDLLPA-KG-W---EVDLDAVEALADENTVALVIINPG 193 (422)
Q Consensus 121 ~a~~~~~~~l~~~g-d~Vl~~~~~~~~~~~~~~~~-g~~~~~~~~~~~-~~-~---~~d~~~l~~~~~~~~~~i~i~~p~ 193 (422)
+|+..+++.+..+| +.|+..+++|+++...+... +......+..+. .+ . ..|++.+++.+.+++++++++.++
T Consensus 114 ea~~~al~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~aviiep~~ 193 (398)
T PRK03244 114 EANEAAFKLARLTGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPYGDVDALAAAVDDDTAAVFLEPIQ 193 (398)
T ss_pred HHHHHHHHHHHHHCCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCCCCHHHHHHhhcCCeEEEEEeccc
Confidence 99999999766566 57788888998875444422 211111110000 00 0 027889998887778888888889
Q ss_pred CCcccccCHH-HHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCC
Q 014603 194 NPCGNVYTYQ-HLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDP 272 (422)
Q Consensus 194 nptG~~~~~~-~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~ 272 (422)
||+|.++|++ .+++|.++|++||+++|+||+|+++.++|... .+...+..++ +.++||.++ +|+|+|+++++
T Consensus 194 ~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~-~~~~~~~~pD---i~t~sK~l~-~G~~ig~~~~~-- 266 (398)
T PRK03244 194 GEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGAWF-AHQHDGVTPD---VVTLAKGLG-GGLPIGACLAF-- 266 (398)
T ss_pred CCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccchHH-hhhhhCCCCC---EEEEchhhh-CCcccEEEEEc--
Confidence 9999987654 49999999999999999999999877766432 1122222223 336789976 89999999996
Q ss_pred CCcccchhHHHHHHhhh-hhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC-CCCCCceE
Q 014603 273 NGILQDSGIVDSIKSFL-NISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCP-KKPEGSMF 350 (422)
Q Consensus 273 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~g~~ 350 (422)
+++++.+.... ..+.+.+++.+.++.++|+...+ .+..++++++.+++++.|+++ +...+ .....|.+
T Consensus 267 ------~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~~-~~~~~~~v~g~g~~ 336 (398)
T PRK03244 267 ------GPAADLLTPGLHGSTFGGNPVACAAALAVLDTIAS---EGLLENAERLGEQLRAGIEAL-GHPLVDHVRGRGLL 336 (398)
T ss_pred ------HHHHhhccCCCCcCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHhc-CCCceeeEeeccEE
Confidence 45777665432 23457788999999999875322 245566777788888888875 22111 12346789
Q ss_pred EEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHHHHHHHHHhc
Q 014603 351 VMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGRMKAFYDRHA 419 (422)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~l~~~~~~~~ 419 (422)
+|+.++.. ...++...+ .++||.+.+.. .+++|++++ .+++++++++++|++++++..
T Consensus 337 ~~i~~~~~------~~~~~~~~l-~~~Gv~~~~~~----~~~iR~~p~~~~t~~~i~~~~~~l~~~l~~~~ 396 (398)
T PRK03244 337 LGIVLTAP------VAKAVEAAA-REAGFLVNAVA----PDVIRLAPPLIITDAQVDAFVAALPAILDAAA 396 (398)
T ss_pred EEEEEecc------HHHHHHHHH-HHCCeEEeecC----CCEEEEECCCcCCHHHHHHHHHHHHHHHHhcc
Confidence 99988532 244555555 56799998742 478999987 689999999999999997643
No 138
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.97 E-value=3.9e-29 Score=236.77 Aligned_cols=315 Identities=19% Similarity=0.214 Sum_probs=225.9
Q ss_pred CCcHHHHHHHHHHhhCCCCC-CCCC-------CCCCHHHHHHHHHHHhhcCCCCCC-CCCEEEecCHHHHHHHHHHHhcC
Q 014603 62 RTASVAVDAIVHSVRSARFN-CYSS-------TVGILPARRAIADYLNRDLPYKLS-PDDVYLTLGCTQAIEVILTVLAR 132 (422)
Q Consensus 62 ~~~~~v~~a~~~~~~~~~~~-~y~~-------~~g~~~lr~~ia~~l~~~~~~~~~-~~~i~~~~g~~~a~~~~~~~l~~ 132 (422)
++++.+.+++.+.+.....+ ..+. ...+.++|+.++++++ .+ ++++++|+|++++++.++.++..
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~------~~~~~~v~~~~g~t~a~~~~~~~l~~ 83 (373)
T cd06453 10 QKPQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFIN------APSPDEIIFTRNTTEAINLVAYGLGR 83 (373)
T ss_pred CCCHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHhC------CCCCCeEEEeCCHHHHHHHHHHHhhh
Confidence 56788999998877442111 0001 1235678888888883 44 67999999999999999999877
Q ss_pred ---CCCEEEecCCCccch----HHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHH
Q 014603 133 ---PGANILLPRPGFPYY----EARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHL 205 (422)
Q Consensus 133 ---~gd~Vl~~~~~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l 205 (422)
+||+|++++++|.+. ...++..|.+++.++.+ .++.+|++.+++.+.++++++++++++||||.+.+ +
T Consensus 84 ~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~l~~~~~~v~~~~~~~~tG~~~~---~ 158 (373)
T cd06453 84 ANKPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVD--DDGQLDLEALEKLLTERTKLVAVTHVSNVLGTINP---V 158 (373)
T ss_pred cCCCCCEEEECcchhHHHHHHHHHHHhhcCcEEEEeecC--CCCCcCHHHHHHHhcCCceEEEEeCcccccCCcCC---H
Confidence 899999999999774 34455678999999875 34568999999999888999999999999999965 6
Q ss_pred HHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHH
Q 014603 206 QKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSI 285 (422)
Q Consensus 206 ~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~ 285 (422)
++|.++|+++|+++++|++|+.. ....++...+.+ +++.|++|++++ .++|++++++ ++++++
T Consensus 159 ~~i~~~~~~~~~~li~D~a~~~~----~~~~~~~~~~~d---~~~~s~~K~~~~--~g~g~~~~~~--------~~~~~~ 221 (373)
T cd06453 159 KEIGEIAHEAGVPVLVDGAQSAG----HMPVDVQDLGCD---FLAFSGHKMLGP--TGIGVLYGKE--------ELLEEM 221 (373)
T ss_pred HHHHHHHHHcCCEEEEEhhhhcC----ceeeeccccCCC---EEEeccccccCC--CCcEEEEEch--------HHhhcC
Confidence 78888888999999999998752 222223333333 677899999765 4589998863 344444
Q ss_pred Hhhhh----------------------hccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCC
Q 014603 286 KSFLN----------------------ISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPK 343 (422)
Q Consensus 286 ~~~~~----------------------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 343 (422)
..... ..++++.....++..+++...+..+++.+++.+++++++.+.|++++++.+..
T Consensus 222 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 301 (373)
T cd06453 222 PPYGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIPGVRVYG 301 (373)
T ss_pred CCeecCCCccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEeC
Confidence 32210 01245555566666666654445567788888899999999999988776431
Q ss_pred CC-CCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCC--------CCCeEEEEec--cChHHHHHHHHHH
Q 014603 344 KP-EGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVG--------LKDWLRITFA--VEPSALEDGLGRM 411 (422)
Q Consensus 344 ~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~--------~~~~iRis~~--~~~~~l~~~~~~l 411 (422)
.+ ..+.++++.++.. +..++.+.+ .++||.+.+|..+. ..+++|+|++ ++++|++++++.|
T Consensus 302 ~~~~~~~~~~~~~~~~------~~~~i~~~l-~~~gi~i~~g~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~~~~~l 373 (373)
T cd06453 302 DAEDRAGVVSFNLEGI------HPHDVATIL-DQYGIAVRAGHHCAQPLMRRLGVPGTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred CccccCCeEEEEECCc------CHHHHHHHH-HHCCEEeccCccchhHHHHHhCCCCeEEEEecCCCCHHHHHHHHhhC
Confidence 11 1244556666431 456666665 55799998876542 3579999998 7899999998764
No 139
>PRK10534 L-threonine aldolase; Provisional
Probab=99.97 E-value=2.4e-29 Score=234.28 Aligned_cols=315 Identities=16% Similarity=0.171 Sum_probs=218.6
Q ss_pred ceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHH
Q 014603 47 LIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVI 126 (422)
Q Consensus 47 ~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~ 126 (422)
+|||+++.-+ .++|.+.+++.+.... ...|++.....+|++++++++ ++ +.+++++|+++++..+
T Consensus 1 ~~~~~~~~~~-----~p~~~~~~a~~~~~~~--~~~Y~~~~~~~~L~~~la~~~------g~--~~~~v~~~g~~a~~~~ 65 (333)
T PRK10534 1 MIDLRSDTVT-----RPSRAMLEAMMAAPVG--DDVYGDDPTVNALQDYAAELS------GK--EAALFLPTGTQANLVA 65 (333)
T ss_pred CcccccccCC-----CCCHHHHHHHHhccCC--CcccCCCHHHHHHHHHHHHHh------CC--CeEEEeCchHHHHHHH
Confidence 3677777633 3678999998775433 457877677899999999998 33 3456888888888888
Q ss_pred HHHhcCCCCEEEecCCCccc-hHHH-HhhCC-CeEEEeeccCCCCcccCHHHHHHhhcC------CceEEEEeCCCCCcc
Q 014603 127 LTVLARPGANILLPRPGFPY-YEAR-ATHSH-LEVRHFDLLPAKGWEVDLDAVEALADE------NTVALVIINPGNPCG 197 (422)
Q Consensus 127 ~~~l~~~gd~Vl~~~~~~~~-~~~~-~~~~g-~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~i~i~~p~nptG 197 (422)
+.+++.+||+|+++.|+|.. +... +...+ ..++.++.+ .++.+|+++|++.+++ +++++++++|+ +|
T Consensus 66 l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~--~G 141 (333)
T PRK10534 66 LLSHCERGEEYIVGQAAHNYLYEAGGAAVLGSIQPQPIDAA--ADGTLPLDKVAAKIKPDDIHFARTRLLSLENTH--NG 141 (333)
T ss_pred HHHhcCCCCeeEEechhhhhHhcCCchHHhcCceEEeecCC--CCCCCCHHHHHHhhcccCcCcccceEEEEecCC--CC
Confidence 88889999999999888753 3221 23333 566666553 4578899999998865 57889998766 59
Q ss_pred cccCHHHHHHHHHHHHHcCcEEEEccccccccc--CCCCCCCccccCCCCCeEEEecCccccCCCCceeE-EEEeeCCCC
Q 014603 198 NVYTYQHLQKIAETAKKLGIMVIADEVYDHLAF--GNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLG-WLVTSDPNG 274 (422)
Q Consensus 198 ~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~--~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G-~~~~~~~~~ 274 (422)
.+++.+++++|+++|+++++++++||+|..... .+. ....+....+.+ +.||||.|+++ +| |++++
T Consensus 142 ~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~---~~~~~~~~~~~~-~~s~SK~~~~~---~G~~~~~~---- 210 (333)
T PRK10534 142 KVLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYGC---ELKEITQYCDSF-TICLSKGLGTP---VGSLLVGN---- 210 (333)
T ss_pred eecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCC---CHHHHHhcCCEE-EEEeEcCCCCc---ccceEEcC----
Confidence 999999999999999999999999999763211 011 111111111223 34899998654 67 56654
Q ss_pred cccchhHHHHHHhhhhhccC---cchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEE
Q 014603 275 ILQDSGIVDSIKSFLNISSD---PATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFV 351 (422)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~ 351 (422)
+++++.+......++. .+.+.+.++..+|++ . .+..++..+.++.+.+.|+++ ++. +..| .++|+
T Consensus 211 ----~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~----~-~~~~~~~~~~r~~l~~~L~~~-g~~-~~~~-~~nfv 278 (333)
T PRK10534 211 ----RDYIKRARRWRKMTGGGMRQAGILAAAGLYALKH----N-VARLQEDHDNAAWLAEQLREA-GAD-VMRQ-DTNML 278 (333)
T ss_pred ----HHHHHHHHHHHHHhCCchhhHHHHHHHHHHHHHh----h-HHHHHHHHHHHHHHHHHHHhC-CCc-cCCC-CceEE
Confidence 5788888776643321 223456665555543 1 233334455678899999987 776 4344 68899
Q ss_pred EEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHHHHHHHH
Q 014603 352 MVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGRMKAFYD 416 (422)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~l~~~~~ 416 (422)
|++++.. +..++ .++++++||.+.|+. ++|++.+ ++++++++++++|++++.
T Consensus 279 ~~~~~~~------~~~~~-~~~l~~~gi~v~~~~------~~rl~~~~r~t~e~~~~~~~~l~~~~~ 332 (333)
T PRK10534 279 FVRVGEE------QAAAL-GEYMRERNVLINASP------IVRLVTHLDVSREQLAEVVAHWRAFLA 332 (333)
T ss_pred EEECCch------hHHHH-HHHHHHcCeeecCCc------eEEEEEEeCCCHHHHHHHHHHHHHHhc
Confidence 9988631 34445 456677899999873 5788775 789999999999987764
No 140
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.97 E-value=1.9e-28 Score=232.84 Aligned_cols=325 Identities=13% Similarity=0.096 Sum_probs=242.0
Q ss_pred CCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecC
Q 014603 62 RTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPR 141 (422)
Q Consensus 62 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~ 141 (422)
..++++++++.+.... +. .....++.+.+.+.+.+.++.. ..+.++++++++++++.++..++++||+|++++
T Consensus 19 ~~~~~V~~a~~~~~~~-----~~-~~~~~~~~~~~~~~l~~~~g~~-~~~~vi~~~~gt~a~~~a~~~~~~~Gd~Vlv~~ 91 (401)
T PLN02409 19 NIPERVLRAMNRPNED-----HR-SPAFPALTKELLEDVKYIFKTK-SGTPFIFPTTGTGAWESALTNTLSPGDKVVSFR 91 (401)
T ss_pred CCCHHHHHHhcCCCCC-----CC-CHHHHHHHHHHHHHHHHHhCCC-CCCEEEEeCCcHHHHHHHHHhcCCCCCEEEEeC
Confidence 5678898888664322 22 2345666767766666655532 234678899999999999999999999999999
Q ss_pred CCccch--HHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC----CceEEEEeCCCCCcccccCHHHHHHHHHHHHHc
Q 014603 142 PGFPYY--EARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE----NTVALVIINPGNPCGNVYTYQHLQKIAETAKKL 215 (422)
Q Consensus 142 ~~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~----~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~ 215 (422)
++|++. ...++..|.+++.++.++. ..+|++.+++.+++ +++++++++++||||.++|.+++.++++ |+++
T Consensus 92 ~~~~~~~~~~~~~~~g~~v~~v~~~~~--~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~~~~i~~l~~-~~~~ 168 (401)
T PLN02409 92 IGQFSLLWIDQMQRLNFDVDVVESPWG--QGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTNDLAGVRKLLD-CAQH 168 (401)
T ss_pred CCchhHHHHHHHHHcCCceEEEECCCC--CCCCHHHHHHHHhhCcCCCccEEEEEeecccccccCCHHHHHHHHh-hhcc
Confidence 988654 4677788999999987543 34789999998875 6899999999999999988777766666 9999
Q ss_pred CcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhh------
Q 014603 216 GIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL------ 289 (422)
Q Consensus 216 ~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~------ 289 (422)
|+++|+|++++. |..+.++..++.| +++.|.+|++++|. ++||++.+ ++.++++....
T Consensus 169 g~~~vvD~v~s~----g~~~id~~~~~~D---~~~~s~~K~l~~P~-G~G~l~~~--------~~~~~~~~~~~~~~~~~ 232 (401)
T PLN02409 169 PALLLVDGVSSI----GALDFRMDEWGVD---VALTGSQKALSLPT-GLGIVCAS--------PKALEASKTAKSPRVFF 232 (401)
T ss_pred CcEEEEEccccc----CCccccccccCcc---EEEEcCccccCcCC-CcceeEEC--------HHHHHHHhcCCCCCeec
Confidence 999999999975 3333344444443 77788899976532 59999986 34555543210
Q ss_pred ------------hh-ccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC----CceEEE
Q 014603 290 ------------NI-SSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPE----GSMFVM 352 (422)
Q Consensus 290 ------------~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~----~g~~~~ 352 (422)
.. .++++...+.++.++++...+..++.+.++++++++.+++.|+++ ++.+. .+. .+...+
T Consensus 233 ~~~~~~~~~~~g~~~~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~-g~~~~-~~~~~~~s~~v~~ 310 (401)
T PLN02409 233 DWADYLKFYKLGTYWPYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAW-GLKLC-TKKPEWRSDTVTA 310 (401)
T ss_pred CHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCeec-cCChhhcccceEE
Confidence 01 236777788888888887666788999999999999999999987 77644 332 223445
Q ss_pred EecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHHHHHHHHHhc
Q 014603 353 VKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGRMKAFYDRHA 419 (422)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~l~~~~~~~~ 419 (422)
+.++.. .+..++...+++++||.+.+|........|||+.. ++.+++..++.+|++++.+..
T Consensus 311 ~~~p~~-----~~~~~l~~~l~~~~~i~i~~G~~~~~~~~~Rig~~g~~~~~~~~~~~~~~~~~l~~~g 374 (401)
T PLN02409 311 VVVPEG-----IDSAEIVKNAWKKYNLSLGLGLNKVAGKVFRIGHLGNVNELQLLGALAGVEMVLKDVG 374 (401)
T ss_pred EeCCCC-----CCHHHHHHHHHHhCCEEEEcCCCcccCCEEEEcCCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 666532 25667777888889999999876544789999997 789999999999999998754
No 141
>PLN02721 threonine aldolase
Probab=99.97 E-value=8.8e-29 Score=232.78 Aligned_cols=328 Identities=15% Similarity=0.133 Sum_probs=220.5
Q ss_pred CceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHH
Q 014603 46 PLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEV 125 (422)
Q Consensus 46 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~ 125 (422)
.+++|+.+.++ . +++.+.+++.+.........|.+ ...++|++++++++. +.++++++|++++..
T Consensus 6 ~~~~~~~~~~~----~-~~~~~~~a~~~~~~~~~~~~~~~--~~~~l~~~la~~~~~--------~~~~~~~~Gs~a~~~ 70 (353)
T PLN02721 6 RVVDLRSDTVT----K-PTDAMRAAMANAEVDDDVLGYDP--TALRLEEEMAKIFGK--------EAALFVPSGTMGNLI 70 (353)
T ss_pred hhhhhhccccc----C-CCHHHHHHHHhccCCCcccCCCH--HHHHHHHHHHHHhCC--------ceeEEecCccHHHHH
Confidence 46889999866 2 56888888876422222223433 368999999999942 335666677777777
Q ss_pred HHHHhcC-CCCEEEecCCCccchHH---HHhhCCCeEEEeeccCCCCcccCHHHHHHhhc-------CCceEEEEeCC-C
Q 014603 126 ILTVLAR-PGANILLPRPGFPYYEA---RATHSHLEVRHFDLLPAKGWEVDLDAVEALAD-------ENTVALVIINP-G 193 (422)
Q Consensus 126 ~~~~l~~-~gd~Vl~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-------~~~~~i~i~~p-~ 193 (422)
++.++++ +||+|++++|+|..... .+...|.+++.++.+ .++.+|++.+++.++ +++++++++++ +
T Consensus 71 ~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~ 148 (353)
T PLN02721 71 SVLVHCDVRGSEVILGDNSHIHLYENGGISTLGGVHPRTVKNN--EDGTMDLDAIEAAIRPKGDDHFPTTRLICLENTHA 148 (353)
T ss_pred HHHHHccCCCCeEEEcCccceehhcccchhhhcCceeEecCCC--cCCCcCHHHHHHHHHhccCCCCCcceEEEEecccc
Confidence 7877777 99999999999865544 566788888888764 345689999999887 57888988875 7
Q ss_pred CCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCC
Q 014603 194 NPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPN 273 (422)
Q Consensus 194 nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~ 273 (422)
||+|.+++.+++++|.++|+++|+++|+|++|.......... +...+..... .++.|+||+|++ ++|+++..+
T Consensus 149 np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~-~~~~~~~~~d-~~~~s~sK~l~~---~~G~~~~~~-- 221 (353)
T PLN02721 149 NCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGV-PVHRLVKAAD-SVSVCLSKGLGA---PVGSVIVGS-- 221 (353)
T ss_pred ccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCC-CHHHHhhhCC-EEEEecccccCC---ceeeEEecC--
Confidence 899999999999999999999999999999986422110011 1111111111 445579999754 357644332
Q ss_pred CcccchhHHHHHHhhhhhc-cCcchHHHHHH--HHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCC-CCCCCCce
Q 014603 274 GILQDSGIVDSIKSFLNIS-SDPATFIQGAV--PQILEKTEEEFFSKITDILRETADICCDRLKEIPCITC-PKKPEGSM 349 (422)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~--~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~g~ 349 (422)
+++++.+....... +.+....+.++ ...++ .+.+.. ++..++++.+.+.|++++++.+ ...|. +.
T Consensus 222 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~~-~~~~~~~~~l~~~L~~~~~~~~~~~~~~-~~ 290 (353)
T PLN02721 222 -----KSFIRKAKRLRKTLGGGMRQVGVLAAAALVALQ----ENVPKL-EDDHKKAKLLAEGLNQIKGLRVNVAAVE-TN 290 (353)
T ss_pred -----HHHHHhHHHHHHhcCCCeehhHHHHHHHHHHHH----HHHHHH-HHHHHHHHHHHHHHHhCCCcEEecCCcc-ce
Confidence 46777665554322 22222222222 22232 223333 3345677889999998877742 32343 56
Q ss_pred EEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHHHHHHHH
Q 014603 350 FVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGRMKAFYD 416 (422)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~l~~~~~ 416 (422)
++|++++... ..+..++..+| .++||.+.|+. .+++|++++ .+++++++++++|++++.
T Consensus 291 ~~~~~~~~~~---~~~~~~~~~~L-~~~gi~v~~~~----~~~lR~~~~~~~~~~~i~~~~~~l~~~~~ 351 (353)
T PLN02721 291 IVYFDITDGS---RITAEKLCKSL-EEHGVLLMPGN----SSRIRVVTHHQISDSDVQYTLSCFQQAAL 351 (353)
T ss_pred EEEEEccCCc---cccHHHHHHHH-HhCCcEEecCC----CceEEEEecCcCCHHHHHHHHHHHHHHhh
Confidence 7888886410 01456677776 47799999974 568999997 689999999999998765
No 142
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.97 E-value=1.6e-28 Score=234.78 Aligned_cols=331 Identities=16% Similarity=0.160 Sum_probs=229.9
Q ss_pred CCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCC------CCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEec
Q 014603 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARF------NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTL 117 (422)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~------~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~ 117 (422)
++++++|++.+ |.++..+|.+.+++.+++..... ..|.+.....++++.+++++ + . +..++++
T Consensus 45 ~~~~~~~~s~d---ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~------g-~-~~~~~~~ 113 (407)
T PRK09064 45 EREVTVWCSND---YLGMGQHPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLH------G-K-EAALVFT 113 (407)
T ss_pred CceEEEEECCC---CcCCCCCHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHh------C-C-CcEEEEC
Confidence 46789999988 66788899999999998865322 12333445678888888887 2 2 3445556
Q ss_pred CHHHHHHHHHHHhcC--CCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhc----CCceEEEEeC
Q 014603 118 GCTQAIEVILTVLAR--PGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALAD----ENTVALVIIN 191 (422)
Q Consensus 118 g~~~a~~~~~~~l~~--~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~----~~~~~i~i~~ 191 (422)
+|++++..++..+.. +++.|+.....|.+....+...+.++..++. .|++.+++.++ ++++++++++
T Consensus 114 sG~~an~~ai~~l~~~~~~~~i~~~~~~h~s~~~~~~~~~~~~~~~~~-------~d~~~le~~l~~~~~~~~~~v~~~~ 186 (407)
T PRK09064 114 SGYVSNDATLSTLAKLIPDCVIFSDELNHASMIEGIRRSRCEKHIFRH-------NDVAHLEELLAAADPDRPKLIAFES 186 (407)
T ss_pred cHHHHHHHHHHHHhCCCCCCEEEEeCcchHHHHHHHHHcCCcEEEECC-------CCHHHHHHHHHhccCCCCeEEEEeC
Confidence 667787777777654 6777777777777666666777776655442 26677777664 4678899999
Q ss_pred CCCCcccccCHHHHHHHHHHHHHcCcEEEEccccccccc--CCCCCCCccccCC-CCCeEEEecCccccCCCCceeEEEE
Q 014603 192 PGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAF--GNTPFVPMGVFGS-IVPVLTLGSISKRWIVPGWRLGWLV 268 (422)
Q Consensus 192 p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~--~~~~~~~~~~~~~-~~~~i~i~s~sK~~~~~G~r~G~~~ 268 (422)
++|++|.+.+ +++|.++|+++|+++|+||+|+...+ .|... ....+. ++..++++||||.|+++| ||++
T Consensus 187 v~s~~G~~~~---l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~--~~~~~~~~~~div~~t~sKa~g~~G---G~~~ 258 (407)
T PRK09064 187 VYSMDGDIAP---IAEICDLADKYNALTYLDEVHAVGMYGPRGGGI--AERDGLMDRIDIIEGTLAKAFGVMG---GYIA 258 (407)
T ss_pred CCCCCccccC---HHHHHHHHHHcCCEEEEECCCcccccCCCCCCh--HHhcCCCCCCeEEEEecchhhhccC---ceEe
Confidence 9999999854 88888899999999999999984333 22221 111121 123588899999998887 8988
Q ss_pred eeCCCCcccchhHHHHHHhhhh---hccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 014603 269 TSDPNGILQDSGIVDSIKSFLN---ISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKP 345 (422)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 345 (422)
++ +++++.+..... ++.+.++..+.++.++++...+ ....+++++++++++.+.|+++ ++. +..+
T Consensus 259 ~~--------~~~~~~l~~~~~~~~~t~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~ 326 (407)
T PRK09064 259 GS--------AALVDAVRSYAPGFIFTTSLPPAIAAAALASIRHLKE--SNEERERHQERAAKLKAALDAA-GIP-VMPN 326 (407)
T ss_pred cC--------HHHHHHHHHhCccccccCcCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHc-CCC-CCCC
Confidence 75 467776654332 2234556677777777765321 1334677888999999999987 666 3233
Q ss_pred CCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC---CCeEEEEec--cChHHHHHHHHHHHHHHHHh
Q 014603 346 EGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL---KDWLRITFA--VEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 346 ~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~---~~~iRis~~--~~~~~l~~~~~~l~~~~~~~ 418 (422)
.+.++++.++.. ....++..++++++||.+.+...+.. .+++||+++ ++++|++++++.|+++++++
T Consensus 327 -~~~iv~i~~~~~-----~~~~~l~~~L~~~~gi~v~~~~~p~~~~~~~~lRis~~~~~t~edi~~l~~~l~~~~~~~ 398 (407)
T PRK09064 327 -ESHIVPVMVGDP-----EKCKKASDMLLEEHGIYVQPINYPTVPRGTERLRITPTPFHTDEMIDHLVEALVEVWARL 398 (407)
T ss_pred -CCCEEEEEeCCH-----HHHHHHHHHHHHhCCEEEeeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Confidence 355666655421 12456767776667999988654433 367999998 78999999999999998765
No 143
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.97 E-value=6.5e-29 Score=232.25 Aligned_cols=313 Identities=15% Similarity=0.120 Sum_probs=219.4
Q ss_pred CCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEec
Q 014603 61 FRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLP 140 (422)
Q Consensus 61 ~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~ 140 (422)
++++|.+++++.+..... ..|.+.....++++.+++++ + ++++++++||++++..++++++++||+|+++
T Consensus 8 ~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~l~~~~a~~~------g--~~~~~~~~~gt~a~~~~~~~l~~~gd~v~~~ 77 (338)
T cd06502 8 TGPTPEMLEAMAAANVGD--DVYGEDPTTAKLEARAAELF------G--KEAALFVPSGTAANQLALAAHTQPGGSVICH 77 (338)
T ss_pred CCCCHHHHHHHHhcccCC--cccCCCHHHHHHHHHHHHHh------C--CCeEEEecCchHHHHHHHHHhcCCCCeEEEe
Confidence 467899999998865432 25666667789999999988 3 5678888889999999999999999999999
Q ss_pred CCCccchHH---HHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC-------CceEEEEeCCCCCcccccCHHHHHHHHH
Q 014603 141 RPGFPYYEA---RATHSHLEVRHFDLLPAKGWEVDLDAVEALADE-------NTVALVIINPGNPCGNVYTYQHLQKIAE 210 (422)
Q Consensus 141 ~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-------~~~~i~i~~p~nptG~~~~~~~l~~i~~ 210 (422)
.|+|..... .+...|.+++.++.+ .+.+|++.+++++++ +++++++++|+|| |.+++.+++++|++
T Consensus 78 ~~~~~~~~~~~~~~~~~g~~~~~v~~~---~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~-g~~~~~~~l~~i~~ 153 (338)
T cd06502 78 ETAHIYTDEAGAPEFLSGVKLLPVPGE---NGKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEG-GTVYPLDELKAISA 153 (338)
T ss_pred cCcceeeecCCcHHHHcCceEEeecCC---CCcCCHHHHHHHhhccCCCcCCcceEEEEEeecCC-ccccCHHHHHHHHH
Confidence 999976432 345578888888753 256899999998864 6889999999997 66779999999999
Q ss_pred HHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhh
Q 014603 211 TAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN 290 (422)
Q Consensus 211 ~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (422)
+|+++|+++|+|++|.......... .+..+....+ +++.|+||+|+++| |+++..+ +++++++.....
T Consensus 154 ~~~~~~~~livDea~~~~~~~~~~~-~~~~~~~~~d-~~~~s~sK~~~~~~---g~~~~~~-------~~~~~~~~~~~~ 221 (338)
T cd06502 154 LAKENGLPLHLDGARLANAAAALGV-ALKTYKSGVD-SVSFCLSKGGGAPV---GAVVVGN-------RDFIARARRRRK 221 (338)
T ss_pred HHHHcCCeEeechHHHHHHHHhcCC-CHHHHHhcCC-EEEEeccccCCCcc---ceEEECC-------HHHHHHHHHHHH
Confidence 9999999999999985422111111 2222211122 56779999998887 5544322 567777766542
Q ss_pred h---ccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccccCCCCHH
Q 014603 291 I---SSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDM 367 (422)
Q Consensus 291 ~---~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 367 (422)
. +...+.+.+.++..+|+.. ...+..+++.++++++.+.|+++ ++. + .+..+.++.+.++... ....
T Consensus 222 ~~~~~~~~~~~~~~a~~~~L~~~---~~~~~~~~~~~~~~~l~~~L~~~-~~~-~-~~~~~~~~~v~~~~~~----~~~~ 291 (338)
T cd06502 222 QAGGGMRQSGFLAAAGLAALEND---LWLRRLRHDHEMARRLAEALEEL-GGL-E-SEVQTNIVLLDPVEAN----AVFV 291 (338)
T ss_pred HhCCChhhHHHHHHHHHHHhcCc---hHHHHHHHHHHHHHHHHHHHHhc-CCC-c-ccccCCeEEEecCCcc----HHHH
Confidence 2 1234556777777777642 23455577778889999999988 444 3 3344556666664210 0112
Q ss_pred HHHHHHH--HhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHHHHH
Q 014603 368 EFALKLA--KEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGRMKA 413 (422)
Q Consensus 368 ~~~~~l~--~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~l~~ 413 (422)
++...+. .++|+.+.+.. .+++|++++ +++++++++++++++
T Consensus 292 ~l~~~l~~~~~~gi~~~~~~----~~~lRi~~~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 292 ELSKEAIERRGEGVLFYAWG----EGGVRFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred HHHHHHHHhhhCCEEEEecC----CCeEEEEeecCCCHHHHHHHHHHHhc
Confidence 2222222 15699987753 278999998 589999999998864
No 144
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.97 E-value=2.4e-28 Score=230.17 Aligned_cols=322 Identities=14% Similarity=0.131 Sum_probs=219.9
Q ss_pred CCcHHHHHHHHHHhhCCCCCCCC--C-----CCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCC
Q 014603 62 RTASVAVDAIVHSVRSARFNCYS--S-----TVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPG 134 (422)
Q Consensus 62 ~~~~~v~~a~~~~~~~~~~~~y~--~-----~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g 134 (422)
.......+++.+.-......++. . ...+.++++.+|++++ . +.+.+++|+++++..++.+++++|
T Consensus 19 ~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~e~lA~~~g------~--~~~~i~~g~~~a~~~~~~~l~~~g 90 (370)
T TIGR02539 19 VLTEAARKALVEFGDGYSVCDFCGGRLDQITKPPIHDFLEDLAEFLG------M--DEARVTHGAREGKFAVMHALCKEG 90 (370)
T ss_pred CCcHHHHHHHHHHhhccccccccccccccccchHHHHHHHHHHHHhC------C--CceEEECChHHHHHHHHHHhhCCC
Confidence 45567777777764421111110 0 1125678888999883 2 457779999999999999999999
Q ss_pred CEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC-------CceEEEEeCCCCCcccccCHHHHHH
Q 014603 135 ANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE-------NTVALVIINPGNPCGNVYTYQHLQK 207 (422)
Q Consensus 135 d~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-------~~~~i~i~~p~nptG~~~~~~~l~~ 207 (422)
|.|+++.+.|.+....++..|++++.++.+.+.++.+|++.|++.+++ +++++++++|+||+|... ++++
T Consensus 91 d~Vl~~~~~h~s~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~---~l~~ 167 (370)
T TIGR02539 91 DWVVLDGLAHYTSYVAAERAGLNVKEVPHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLP---DAGK 167 (370)
T ss_pred CEEEECCcccHHHHHHHHHcCCEEEEEecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCcccc---CHHH
Confidence 999999999877767788899999999876545678899999998752 578899999999999984 5778
Q ss_pred HHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHh
Q 014603 208 IAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKS 287 (422)
Q Consensus 208 i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~ 287 (422)
|.++|+++|+++|+|++|+... ........+. .++++|+||+++ +|.|+||++++ +++++.+..
T Consensus 168 i~~la~~~~~~livDea~~~g~----~~~~~~~~~~---di~v~s~sK~~~-~~g~~G~l~~~--------~~~i~~l~~ 231 (370)
T TIGR02539 168 VAKVCREKGVPLLLNCAYTVGR----MPVSAKEIGA---DFIVGSGHKSMA-ASGPCGVLGMS--------EEWEDIVLR 231 (370)
T ss_pred HHHHHHHcCCeEEEECccccCC----cCCCHHHcCC---CEEEeeCccccc-CCCCEEEEEEC--------HHHHhhhcc
Confidence 8889999999999999998631 1112222222 377799999986 56689999986 467777765
Q ss_pred hhhhc---------cCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC-CCCCCceEEEEecCc
Q 014603 288 FLNIS---------SDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCP-KKPEGSMFVMVKLNY 357 (422)
Q Consensus 288 ~~~~~---------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~g~~~~~~~~~ 357 (422)
....+ .+.....+.++..+++.. .++++...+.++. ++++++.|+++ ++.++ ..|..++|++++++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~-~~~l~~~~~~~~~-~~~l~~~L~~~-g~~~~~~~~s~t~~v~~~~~~ 308 (370)
T TIGR02539 232 KSRYSPVKEVELLGCTSRGAPIVTMMASFPHV-VERVKRWDEEVKK-TRWFVAELEDI-GFIQLGQKPKEHDLVKFETPG 308 (370)
T ss_pred cccCCccceeeeecccccccHHHHHHHHHHHH-HHHHHHHHHHHHH-HHHHHHHHHhC-CcEEEccCCCcCceEEEECCc
Confidence 44311 111112444444555431 3444444444444 45899999988 66521 246667888887753
Q ss_pred cc---ccCCCCHHHHHHHHHHhcCeE-EecCCCCCCCCeEEEEec-cChHHHHHHHHHHHHHHHHh
Q 014603 358 SL---LEGINSDMEFALKLAKEESVI-VLPGITVGLKDWLRITFA-VEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 358 ~~---~~~~~~~~~~~~~l~~~~gi~-v~~g~~~~~~~~iRis~~-~~~~~l~~~~~~l~~~~~~~ 418 (422)
.. .........+...| .++||. +.++ .++++|+++. .++++++++++.|+++++++
T Consensus 309 ~~~~~~~~~~~~~~~~~~L-~e~GI~~ir~~----~~~~iRis~~~~t~e~i~~l~~~L~~~~~~~ 369 (370)
T TIGR02539 309 FHEIAQKHKRRGYFLYEEL-KKRGIHGIRSG----QTKYFKLSVYGLTKEQVEYVVDSFEEIVEEY 369 (370)
T ss_pred hhHHhhhhccccHHHHHHH-HhCCCccccCC----cceEEEEEecCCCHHHHHHHHHHHHHHHHhc
Confidence 10 00011223454544 667997 6543 3569999964 68999999999999987764
No 145
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.97 E-value=2.2e-28 Score=229.74 Aligned_cols=327 Identities=16% Similarity=0.142 Sum_probs=225.6
Q ss_pred CceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCC--CCC----CCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCH
Q 014603 46 PLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARF--NCY----SSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGC 119 (422)
Q Consensus 46 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~y----~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~ 119 (422)
.+++|+..+ +.+.+.+|++.+++.+.+.+... ..| +......++++.++++++ . +..++++++
T Consensus 2 ~~~~~~~~~---~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~------~--~~~iv~~sg 70 (349)
T cd06454 2 KVLNFCSND---YLGLANHPEVIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFHG------K--EAALVFSSG 70 (349)
T ss_pred CceecccCC---ccccCCCHHHHHHHHHHHHHhCCCCCCcCeecCCchHHHHHHHHHHHHhC------C--CCEEEeccH
Confidence 357887776 56677789999999999975321 112 222334677777777762 2 245666677
Q ss_pred HHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC-----CceEEEEeCCCC
Q 014603 120 TQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE-----NTVALVIINPGN 194 (422)
Q Consensus 120 ~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-----~~~~i~i~~p~n 194 (422)
++++.+++++++++||.|++++|+|.++...++..|.+++.++. .|.+.+++.+++ +++++++++++|
T Consensus 71 ~~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-------~~~~~le~~i~~~~~~~~~~~v~~~~~~~ 143 (349)
T cd06454 71 YAANDGVLSTLAGKGDLIISDSLNHASIIDGIRLSGAKKRIFKH-------NDMEDLEKLLREARRPYGKKLIVTEGVYS 143 (349)
T ss_pred HHHHHHHHHHhcCCCCEEEEehhhhHHHHHHHHHcCCceEEecC-------CCHHHHHHHHHHhhccCCCeEEEEecccc
Confidence 88988888888999999999999999988888888988876642 466777777653 456777889999
Q ss_pred CcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCC-CCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCC
Q 014603 195 PCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTP-FVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPN 273 (422)
Q Consensus 195 ptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~-~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~ 273 (422)
|||... ++++|+++|+++|+++|+|++|+...+.... ..........+.+++++|+||+++.+| ||++.+
T Consensus 144 ~tG~~~---~~~~i~~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g---G~i~~~--- 214 (349)
T cd06454 144 MDGDIA---PLPELVDLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGAVG---GYIAGS--- 214 (349)
T ss_pred CCCCcc---CHHHHHHHHHHcCCEEEEEccccccccCCCCCChhhhccccccCcEEEeechhhhcccC---CEEECC---
Confidence 999984 5788899999999999999999743222111 000111122345699999999987665 888875
Q ss_pred CcccchhHHHHHHhhhh---hccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceE
Q 014603 274 GILQDSGIVDSIKSFLN---ISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMF 350 (422)
Q Consensus 274 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~ 350 (422)
+++.+.+..... ..++.++..+.++.++++...+ .+..+++++++++.+.+.|+++ ++.+. .+.++.+
T Consensus 215 -----~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~l~~~l~~~-g~~~~-~~~~~~~ 285 (349)
T cd06454 215 -----KELIDYLRSYARGFIFSTSLPPAVAAAALAALEVLQG--GPERRERLQENVRYLRRGLKEL-GFPVG-GSPSHII 285 (349)
T ss_pred -----HHHHHHHHHhchhhhccCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHhc-CCccc-CCCCCcE
Confidence 356666654332 1234556667777777765322 4567788999999999999887 66533 3333444
Q ss_pred EEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCC---CCCeEEEEec--cChHHHHHHHHHHHHH
Q 014603 351 VMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVG---LKDWLRITFA--VEPSALEDGLGRMKAF 414 (422)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~---~~~~iRis~~--~~~~~l~~~~~~l~~~ 414 (422)
.++.++.. .+..++...+.+ +||.+.++.... ..+++|++++ .+++++++++++|+++
T Consensus 286 ~~~~~~~~-----~~~~~~~~~L~~-~gI~~~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 286 PPLIGDDP-----AKAVAFSDALLE-RGIYVQAIRYPTVPRGTARLRISLSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred EEEeCCCh-----HHHHHHHHHHHh-CCceEEEecCCccCCCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 44434311 135667677655 499998864321 1478999998 6899999999999764
No 146
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.97 E-value=1.9e-28 Score=230.71 Aligned_cols=345 Identities=18% Similarity=0.179 Sum_probs=243.8
Q ss_pred CCCCceeecCCCCCCCCCCCCc---HHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTA---SVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGC 119 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~---~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~ 119 (422)
.|-+++.|.++++-. .+..+ ..+.+++.+.+..+. ..|.+..+.++||++++++++ .+++++|+||
T Consensus 9 ~g~n~~~l~~~~v~i--Dlltds~t~ams~~~~~a~~~gd-~~Y~~~~g~~~Leeaia~~~g--------~~~vv~t~~G 77 (431)
T cd00617 9 AGYNVFLLRSEDVYI--DLLTDSGTGAMSDYQWAAMMLGD-EAYAGSKSFYDLEDAVQDLFG--------FKHIIPTHQG 77 (431)
T ss_pred cCCCEEeCCCCCcCC--CCCCCCCcHHHHHHHHHHHHhCC-CccCCCCCHHHHHHHHHHHHC--------CCeEEEcCCH
Confidence 588889999998721 12333 355555555554443 479999999999999999993 3589999999
Q ss_pred HHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCC--------CcccCHHHHHHhhcCC----ceEE
Q 014603 120 TQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAK--------GWEVDLDAVEALADEN----TVAL 187 (422)
Q Consensus 120 ~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--------~~~~d~~~l~~~~~~~----~~~i 187 (422)
++|+.+++.++++|||.| +++|.|..+.......|..++.+++++.. .+.+|++.|++.++++ ++++
T Consensus 78 t~Al~la~~al~~pGD~V-~~~~~f~~~~~~i~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~~~~~~I 156 (431)
T cd00617 78 RGAENILFSILLKPGRTV-PSNMHFDTTRGHIEANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGAENIPYI 156 (431)
T ss_pred HHHHHHHHHHhCCCCCEE-ccCCcccchHHHHHhCCCEeEEEecccccccccccCCCCCcCHHHHHHHhCcccCCCccEE
Confidence 999999999999999987 68899999988889999999999986542 2459999999998765 6788
Q ss_pred EEeCCCCCc-ccccCHHHHHHHHHHHHHcCcEEEEccccccc--cc-----CCCCCCCccccCCCCCeEEEecCccccCC
Q 014603 188 VIINPGNPC-GNVYTYQHLQKIAETAKKLGIMVIADEVYDHL--AF-----GNTPFVPMGVFGSIVPVLTLGSISKRWIV 259 (422)
Q Consensus 188 ~i~~p~npt-G~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~--~~-----~~~~~~~~~~~~~~~~~i~i~s~sK~~~~ 259 (422)
+++.|+||+ |..++.+++++|.++|++||++||.|+++... .+ .|....++..+ ++.++|++|.+.+
T Consensus 157 ~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~ei-----~~e~~s~sd~~~m 231 (431)
T cd00617 157 VLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIAEI-----AREMFSYADGCTM 231 (431)
T ss_pred EEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHHHH-----HHHhhccCCEEEE
Confidence 999999998 99999999999999999999999999996531 11 12111222211 2334555555555
Q ss_pred CCce------eEEEEeeCCCCcccchhHHHHHHhhhh-----h-ccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHH
Q 014603 260 PGWR------LGWLVTSDPNGILQDSGIVDSIKSFLN-----I-SSDPATFIQGAVPQILEKTEEEFFSKITDILRETAD 327 (422)
Q Consensus 260 ~G~r------~G~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~ 327 (422)
.|++ .||+++++ +++.++++.... . .++.+.....++...|++..+ .+...+++ ++++
T Consensus 232 S~~K~~~~~~GG~i~~~d-------~~l~~~~~~~~~~~~~~~~~gG~~~r~~~A~A~gL~e~~~--~~~l~~~~-~~r~ 301 (431)
T cd00617 232 SAKKDGLVNIGGFLALRD-------DELYEEARQRVVLYEGFVTYGGMAGRDMEALAQGLREAVE--EDYLRHRV-EQVR 301 (431)
T ss_pred EeecCCCCccceEEEeCc-------HHHHHHHHHhccccCCccccccccHHHHHHHHHHHHhccc--HHHHHHHH-HHHH
Confidence 5555 46888864 457777764321 1 112233333444445654211 12233333 3558
Q ss_pred HHHHHhhcCCCCCCCCCCCCceEEEEecCccc----ccCCCCHHHHHHHHHHhcCeEEec-CCCC-C-----------CC
Q 014603 328 ICCDRLKEIPCITCPKKPEGSMFVMVKLNYSL----LEGINSDMEFALKLAKEESVIVLP-GITV-G-----------LK 390 (422)
Q Consensus 328 ~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~l~~~~gi~v~~-g~~~-~-----------~~ 390 (422)
++.+.|++. |+. +..|.+|+++|+.++.-. ... .++.+++.+|+++.||.+.- |... + .-
T Consensus 302 ~l~~~L~~~-G~~-v~~P~Ggh~v~~d~~~~~~~~~~~~-~~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~~~~~~~~ 378 (431)
T cd00617 302 YLGDRLDEA-GVP-IVEPAGGHAVFIDAREFLPHIPQEQ-FPAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYPEL 378 (431)
T ss_pred HHHHHHHHC-CCC-ccCCCcceEEEEEhHHhcCCCCccc-CcHHHHHHHHHHHcCeeEEeecceecccCCCCCcccCCcc
Confidence 888999988 888 448999999999876420 011 14778888899999999754 3311 1 02
Q ss_pred CeEEEEec---cChHHHHHHHHHHHHHHHH
Q 014603 391 DWLRITFA---VEPSALEDGLGRMKAFYDR 417 (422)
Q Consensus 391 ~~iRis~~---~~~~~l~~~~~~l~~~~~~ 417 (422)
..+|+++. .+.+.++..++.|..++++
T Consensus 379 ~~~rl~~prr~~t~~~~~~~~~~~~~~~~~ 408 (431)
T cd00617 379 ELVRLAIPRRVYTQDHMDYVAAAVIALYER 408 (431)
T ss_pred ceeEEeccccccCHHHHHHHHHHHHHHHhh
Confidence 67999997 5789999999999988765
No 147
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.97 E-value=1.1e-28 Score=234.04 Aligned_cols=334 Identities=14% Similarity=0.095 Sum_probs=235.6
Q ss_pred eecCCCCCCCCCCCCcHHHHHHHHHHhhCCC----CCCCCC----CCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHH
Q 014603 49 PLGHGDPSAFPSFRTASVAVDAIVHSVRSAR----FNCYSS----TVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT 120 (422)
Q Consensus 49 ~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~----~~~y~~----~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~ 120 (422)
+|+++... +++|+.+.+++.+.+.... ...|.. .....++|+.++++++. ...++|++++|++
T Consensus 2 yld~a~~~----~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~-----~~~~~v~~~~g~t 72 (376)
T TIGR01977 2 YFDNAATT----YPKPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNA-----PSSAHVVFTNNAT 72 (376)
T ss_pred CccCcccC----CCCCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhCc-----CCCCeEEEeCCHH
Confidence 45655522 5778899999988876532 112322 14567889999999842 1335899999999
Q ss_pred HHHHHHHHHhcCCCCEEEecCCCccchH----HHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCc
Q 014603 121 QAIEVILTVLARPGANILLPRPGFPYYE----ARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPC 196 (422)
Q Consensus 121 ~a~~~~~~~l~~~gd~Vl~~~~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~npt 196 (422)
++++.++.+++++||+|++..++|.++. ..++..|.+++.++.+. ++.+|++.+++.++++++++++++|+|||
T Consensus 73 ~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~~~~~~~~v~~~~~~n~t 150 (376)
T TIGR01977 73 TALNIALKGLLKEGDHVITTPMEHNSVARPLECLKEQIGVEITIVKCDN--EGLISPERIKRAIKTNTKLIVVSHASNVT 150 (376)
T ss_pred HHHHHHHHhccCCCCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCC--CCCcCHHHHHHhcCCCCeEEEEECCCCCc
Confidence 9999999999999999999999997653 34555688988888753 45689999999998889999999999999
Q ss_pred ccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcc
Q 014603 197 GNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGIL 276 (422)
Q Consensus 197 G~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~ 276 (422)
|.+++ +++|.++|+++|+++|+|++++.. .....+...+.| +++.|++|++++|. .+|++++++.....
T Consensus 151 G~~~~---~~~i~~l~~~~~~~livD~a~~~g----~~~~~~~~~~~D---~~~~s~~K~l~~p~-g~g~l~~~~~~~~~ 219 (376)
T TIGR01977 151 GTILP---IEEIGELAQENGIFFILDAAQTAG----VIPIDMTELAID---MLAFTGHKGLLGPQ-GTGGLYIREGIKLK 219 (376)
T ss_pred cccCC---HHHHHHHHHHcCCEEEEEhhhccC----ccCCCchhcCCC---EEEecccccccCCC-CceEEEEcCCcCcC
Confidence 99976 567788899999999999999862 222233333333 88899999875442 25777665432100
Q ss_pred cchhHHH-------HH---H--hhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC
Q 014603 277 QDSGIVD-------SI---K--SFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKK 344 (422)
Q Consensus 277 ~~~~~~~-------~~---~--~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 344 (422)
+.... .+ . ......++++.....++.++++...+...+...++.+++.+.+.+.|++++++.+. .
T Consensus 220 --~~~~~~~~~~~~~~~~~~~~~~r~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~-~ 296 (376)
T TIGR01977 220 --PLKSGGTGSHSALIDQPSELPDRFESGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLREINKVKIY-G 296 (376)
T ss_pred --ceecCCCccccccccccccchhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEe-C
Confidence 00000 00 0 00111245666677777777776555667788889999999999999988787643 3
Q ss_pred CC----CceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCC----------CCCeEEEEec--cChHHHHHHH
Q 014603 345 PE----GSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVG----------LKDWLRITFA--VEPSALEDGL 408 (422)
Q Consensus 345 ~~----~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~----------~~~~iRis~~--~~~~~l~~~~ 408 (422)
|. .+..+++.++.. +..++...|.+++||.+.+|..+. ..+.+|++++ ++++|++.++
T Consensus 297 ~~~~~~~~~~v~~~~~~~------~~~~~~~~L~~~~gi~v~~g~~~~~~~~~~~g~~~~~~iRis~~~~~t~~dv~~~~ 370 (376)
T TIGR01977 297 PADPANRVGVVSFTVEGI------DSEEVADILDEKFDIATRTGLHCAPLAHKTIGTFATGTIRLSLGYFNTEEEIEKLL 370 (376)
T ss_pred CCCccccCCeEEEEECCC------CHHHHHHHHhccCCEEEEcccccchHHHHHhCCCCCCeEEEecCCCCCHHHHHHHH
Confidence 21 134555566431 456666666555599999987663 2478999998 7899999999
Q ss_pred HHHHH
Q 014603 409 GRMKA 413 (422)
Q Consensus 409 ~~l~~ 413 (422)
++|++
T Consensus 371 ~~l~~ 375 (376)
T TIGR01977 371 EALSE 375 (376)
T ss_pred HHHhh
Confidence 99875
No 148
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.97 E-value=4.5e-28 Score=231.74 Aligned_cols=339 Identities=16% Similarity=0.102 Sum_probs=232.3
Q ss_pred CCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCC------CCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecC
Q 014603 45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSA------RFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLG 118 (422)
Q Consensus 45 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~------~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g 118 (422)
...++|.-+. -..+|.+++++.+.+... ....|....+.+++++.+++++.+.+| .+...|+++ |
T Consensus 19 ~~~~~~~~~~------~~~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g--~~~~~v~~~-s 89 (402)
T cd00378 19 RETLELIASE------NFTSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFG--AEYANVQPH-S 89 (402)
T ss_pred HhCeeeeccC------CcCCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhC--CCceeeecC-C
Confidence 4578886665 245789999998765321 122444555667777776666655554 333445544 5
Q ss_pred HHHHHHHHHHHhcCCCCEEEecCCCccchHHH-----HhhCCCeEEEeeccCC-CCcccCHHHHHHhhc-CCceEEEEeC
Q 014603 119 CTQAIEVILTVLARPGANILLPRPGFPYYEAR-----ATHSHLEVRHFDLLPA-KGWEVDLDAVEALAD-ENTVALVIIN 191 (422)
Q Consensus 119 ~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~-----~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~~~-~~~~~i~i~~ 191 (422)
|++|+..++.+++++||+|++++|+|.++... ++..|.++..+++..+ +++.+|++.+++.+. ++++++++++
T Consensus 90 gt~a~~~~l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~~~~~~v~~~~ 169 (402)
T cd00378 90 GSQANLAVYFALLEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKMALEFKPKLIVAGA 169 (402)
T ss_pred cHHHHHHHHHHhcCCCCEEEEecCccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHHHHhCCCCEEEecC
Confidence 68999999999999999999999999765332 4556776777766543 257899999999884 5788888888
Q ss_pred CCCCcccccCHHHHHHHHHHHHHcCcEEEEcccc-cccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEee
Q 014603 192 PGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVY-DHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTS 270 (422)
Q Consensus 192 p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~-~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~ 270 (422)
|+||+ . .++++|+++|+++|+++|+|++| .++.+.|....++. .. + ++++|+||++ +|+|.||++++
T Consensus 170 ~~~~~--~---~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~--~~--d-v~~~s~sK~l--~G~~gg~i~~~ 237 (402)
T cd00378 170 SAYPR--P---IDFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLP--GA--D-VVTTTTHKTL--RGPRGGLILTR 237 (402)
T ss_pred cccCC--C---cCHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCccc--CC--c-EEEeccccCC--CCCCceEEEec
Confidence 87764 3 35889999999999999999996 33333332222222 22 2 7899999985 78889999986
Q ss_pred CCCCcccchhHHHHHHhhhhh--ccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCc
Q 014603 271 DPNGILQDSGIVDSIKSFLNI--SSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGS 348 (422)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g 348 (422)
+ +++.+++...... .+++....+.++..++......+.++.+++++++++.+.+.|+++ ++.+...|.++
T Consensus 238 ~-------~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~ 309 (402)
T cd00378 238 K-------GELAKKINSAVFPGLQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEALKER-GFKVVSGGTDN 309 (402)
T ss_pred c-------HHHHHHHHHHhCccccCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhC-CCeEeecCCCC
Confidence 3 3577777654421 223333344444444543323356778888999999999999987 77643346678
Q ss_pred eEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCC------CCCeEEEEec--c----ChHHHHHHHHHHHHHHH
Q 014603 349 MFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVG------LKDWLRITFA--V----EPSALEDGLGRMKAFYD 416 (422)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~------~~~~iRis~~--~----~~~~l~~~~~~l~~~~~ 416 (422)
+++|+.++... .+.. .+..+++++||.+.++..+. ..+++|++++ + ++++++.+++.|+++++
T Consensus 310 ~~v~v~~~~~~----~~~~-~~~~~l~~~gI~v~~~~~p~~~~~~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~~~~ 384 (402)
T cd00378 310 HLVLVDLRPKG----ITGK-AAEDALEEAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMGEEEMEEIADFIARALK 384 (402)
T ss_pred eEEEEeCCccC----CCHH-HHHHHHHHcCcEEcCCcCCCCCCCCCCCCeeEecCHHHHHhCCCHHHHHHHHHHHHHHHh
Confidence 99999986321 1233 34455678899998643221 2468999986 2 58999999999999876
Q ss_pred H
Q 014603 417 R 417 (422)
Q Consensus 417 ~ 417 (422)
+
T Consensus 385 ~ 385 (402)
T cd00378 385 D 385 (402)
T ss_pred c
Confidence 5
No 149
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.97 E-value=4.7e-28 Score=229.37 Aligned_cols=336 Identities=16% Similarity=0.185 Sum_probs=231.2
Q ss_pred cCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHH
Q 014603 42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ 121 (422)
Q Consensus 42 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 121 (422)
.+|+.++||..|....+.++ .+|++.+++.+++++.. ... .....+++..+++++.+..+ .+.++++++|++
T Consensus 26 ~~G~~~lD~~s~~~~~~lG~-~~p~v~~a~~~~~~~~~--~~~-~~~~~~~~~~la~~l~~~~~----~~~~~~~~sG~~ 97 (377)
T PRK02936 26 NNGKTYLDFTSGIAVCNLGH-CHPTVTKAVQEQLDDIW--HVS-NLFTNSLQEEVASLLAENSA----GDLVFFCNSGAE 97 (377)
T ss_pred CCCCEEEECCcchhhccCCC-CCHHHHHHHHHHHHhcc--ccc-cccCCHHHHHHHHHHHhcCC----CCEEEEeCCcHH
Confidence 36889999999986655554 78999999999997632 122 23456889999999976432 358999999999
Q ss_pred HHHHHHHHhc-CCC-CEEEecCCCccchHHHHh-hCCCeEE---EeeccCCCCc--ccCHHHHHHhhcCCceEEEEeCCC
Q 014603 122 AIEVILTVLA-RPG-ANILLPRPGFPYYEARAT-HSHLEVR---HFDLLPAKGW--EVDLDAVEALADENTVALVIINPG 193 (422)
Q Consensus 122 a~~~~~~~l~-~~g-d~Vl~~~~~~~~~~~~~~-~~g~~~~---~~~~~~~~~~--~~d~~~l~~~~~~~~~~i~i~~p~ 193 (422)
|++.+++... -+| ++|++.+++||+...... ..+.... ..++.+...+ ..|++.+++.+.++++++++..++
T Consensus 98 a~~~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~ii~e~i~ 177 (377)
T PRK02936 98 ANEAALKLARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMNEEVAAVMLEVVQ 177 (377)
T ss_pred HHHHHHHHHHHhcCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCCCHHHHHHhccCCeEEEEEeccc
Confidence 9999998542 234 679999999987643322 2221110 1111110000 017889999888778888777778
Q ss_pred CCcccc-cCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCC
Q 014603 194 NPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDP 272 (422)
Q Consensus 194 nptG~~-~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~ 272 (422)
+++|.. .+++++++|.++|++||+++|+||+|.++.++|... .+...+..++ +.++||.++ +|+|+||++++
T Consensus 178 ~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~-~~~~~~~~~d---i~t~sK~l~-~G~~ig~v~~~-- 250 (377)
T PRK02936 178 GEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLF-AYEQFGLDPD---IVTVAKGLG-NGIPVGAMIGK-- 250 (377)
T ss_pred CCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhh-HHHhhCCCCc---EEEEccccc-CCCccEEEEEc--
Confidence 888876 578999999999999999999999999887766432 2222332223 336899986 89999999986
Q ss_pred CCcccchhHHHHHHhhh-hhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhc----CCCCCCCCCCCC
Q 014603 273 NGILQDSGIVDSIKSFL-NISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKE----IPCITCPKKPEG 347 (422)
Q Consensus 273 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~~~~~ 347 (422)
+++.+.+.... ..+.+.+++.++++.++|+.... ++..++++++.+.+++.|++ ++.+. . ....
T Consensus 251 ------~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~-v~~~ 319 (377)
T PRK02936 251 ------KELGTAFGPGSHGSTFGGNPLAMAAAKEVLQVIKQ---PSFLEEVQEKGEYFLQKLQEELEHLECVK-N-IRGK 319 (377)
T ss_pred ------HHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhhCCcEE-e-Eeec
Confidence 46777765433 23346788999999999976421 23344555556666665554 33322 1 1234
Q ss_pred ceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHHHHHHH
Q 014603 348 SMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGRMKAFY 415 (422)
Q Consensus 348 g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~l~~~~ 415 (422)
|.++|+.++. +...+.. .+.++||.+.|+. .+++|++++ .+++++++++++|++++
T Consensus 320 g~~~~i~~~~-------~~~~~~~-~l~~~gv~v~~~g----~~~lRi~p~~~~~~~~i~~~i~~l~~~~ 377 (377)
T PRK02936 320 GLMIGIECTE-------EVAPVIE-QLREEGLLVLSAG----PNVIRLLPPLVVTKEELDQAVYLLKKVL 377 (377)
T ss_pred ceEEEEEecc-------hHHHHHH-HHHHCCeEEecCC----CCEEEEECCcccCHHHHHHHHHHHHHhC
Confidence 7889988863 2444544 4567799998853 478999974 78999999999998763
No 150
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.97 E-value=5.5e-28 Score=230.42 Aligned_cols=337 Identities=15% Similarity=0.130 Sum_probs=234.1
Q ss_pred ceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCC--------CCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecC
Q 014603 47 LIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYS--------STVGILPARRAIADYLNRDLPYKLSPDDVYLTLG 118 (422)
Q Consensus 47 ~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~--------~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g 118 (422)
.++|+++.++ ++++.+++++.+.+.....+... ....+.++|+.+++++ ++++++|++++|
T Consensus 4 ~~yld~aa~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~v~~~~g 72 (402)
T TIGR02006 4 PIYLDYAATT-----PVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELI------GADSREIVFTSG 72 (402)
T ss_pred cEEeeCCcCC-----CCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCC
Confidence 4788888755 67789999998887532111110 0123566788888887 557889999999
Q ss_pred HHHHHHHHHHHhc----CCCCEEEecCCCccchHHH---HhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeC
Q 014603 119 CTQAIEVILTVLA----RPGANILLPRPGFPYYEAR---ATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIIN 191 (422)
Q Consensus 119 ~~~a~~~~~~~l~----~~gd~Vl~~~~~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~ 191 (422)
+|++++.++.++. ++||+|+++.++|+++... ++..|.+++.++.++ ++.+|++.+++.++++++++++++
T Consensus 73 ~t~a~~~~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~l~~~~~lv~v~~ 150 (402)
T TIGR02006 73 ATESNNLAIKGIAHFYKSKGNHIITSKTEHKAVLDTCRYLEREGFEVTYLPPKS--NGLIDLEELKAAIRDDTILVSIMH 150 (402)
T ss_pred HHHHHHHHHHHHHHhhcCCCCEEEECCCccHHHHHHHHHHHhcCCEEEEEccCC--CCcCCHHHHHHhcCCCCEEEEEEC
Confidence 9999999887753 6889999999999875443 344688888888753 456899999999988899999999
Q ss_pred CCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeC
Q 014603 192 PGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD 271 (422)
Q Consensus 192 p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~ 271 (422)
++||||... ++++|.++|+++|+++++|++++. |..+..+...+.| +++.|.+|.++.+| +|++++++
T Consensus 151 ~~n~tG~~~---~~~~I~~l~~~~g~~livD~a~a~----g~~~~~~~~~~~D---~~~~s~~K~~gp~G--~G~l~~~~ 218 (402)
T TIGR02006 151 VNNEIGVIQ---DIAAIGEICRERKVFFHVDAAQSV----GKIPINVNELKVD---LMSISGHKIYGPKG--IGALYVRR 218 (402)
T ss_pred CCcCceecc---cHHHHHHHHHHcCCEEEEEcchhc----CCcccCccccCCC---EEEEehhhhcCCCc--eEEEEEcc
Confidence 999999995 577888999999999999999976 3333344444443 88889999876556 88888764
Q ss_pred CCCcccchhHHHHH-HhhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC--Cc
Q 014603 272 PNGILQDSGIVDSI-KSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPE--GS 348 (422)
Q Consensus 272 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~--~g 348 (422)
.....-.+ +.... .......++++.....++..+++... .+++...++.+++++.+.+.|++++++.+...+. ..
T Consensus 219 ~~~~~~~~-~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~-~~~~~~~~~~~~l~~~l~~~l~~~~~v~~~~~~~~~~p 296 (402)
T TIGR02006 219 KPRVRLEA-LIHGGGHERGMRSGTLPTHQIVGMGEAFRIAK-EEMAQDTAHVLALRDRLLNGIKSIEEVYLNGDLEHRVP 296 (402)
T ss_pred CCCCCCCc-eecCCCccCCccCCCccHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCC
Confidence 22110000 00000 00011234667777777777776533 4677788899999999999999887765321111 11
Q ss_pred eEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC-------------------CCeEEEEec--cChHHHHHH
Q 014603 349 MFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL-------------------KDWLRITFA--VEPSALEDG 407 (422)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~-------------------~~~iRis~~--~~~~~l~~~ 407 (422)
..+.+.++.. +..++...+ .++.+..|..|.. .+++|+|++ ++++|++++
T Consensus 297 ~~~~v~f~~~------~~~~~~~~l---~~i~v~~G~~c~~~~~~~~~~l~~lg~~~~~~~~~vR~S~~~~~t~edid~l 367 (402)
T TIGR02006 297 GNLNVSFNYV------EGESLIMAL---KDLAVSSGSACTSASLEPSYVLRALGINDELAHSSIRFTIGRFTTEEEIDYA 367 (402)
T ss_pred CeEEEEEeCc------CHHHHHHhc---CCEEEechhhcCCCCCCccHHHHHcCCChhhcCceEEEEecCCCCHHHHHHH
Confidence 1112333311 334443332 4888888876642 378999998 789999999
Q ss_pred HHHHHHHHHHhc
Q 014603 408 LGRMKAFYDRHA 419 (422)
Q Consensus 408 ~~~l~~~~~~~~ 419 (422)
++.|.+++++++
T Consensus 368 ~~~l~~~~~~~~ 379 (402)
T TIGR02006 368 VKLVKSAIDKLR 379 (402)
T ss_pred HHHHHHHHHHHH
Confidence 999999887753
No 151
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.97 E-value=9.8e-29 Score=205.02 Aligned_cols=287 Identities=20% Similarity=0.300 Sum_probs=223.5
Q ss_pred CCCCCCEEEecCHHHHHHHHHHHhcCCC-CEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC--C
Q 014603 107 KLSPDDVYLTLGCTQAIEVILTVLARPG-ANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE--N 183 (422)
Q Consensus 107 ~~~~~~i~~~~g~~~a~~~~~~~l~~~g-d~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~--~ 183 (422)
+..+++|+++.|+.+.+.+++++.+.|| ++|+.-.|+|.-|...+...+++++.+|+++ ++.++.+.+.+.++. .
T Consensus 83 pLt~dnic~GvGsDE~ID~iiR~~c~PGkeKIl~cPPtysMY~v~A~iNd~eVvkvpl~p--dF~lnvdai~evl~~ds~ 160 (375)
T KOG0633|consen 83 PLTSDNICVGVGSDELIDLIIRCVCDPGKEKILDCPPTYSMYVVDAAINDAEVVKVPLNP--DFSLNVDAIAEVLELDSK 160 (375)
T ss_pred CCCccceEEecCcHHHHHHHHhheecCCccceeecCCcceeEEEEeecCCceEEEecCCC--CccccHHHHHHHHhcccc
Confidence 6788999999999999999999999999 8999999999988888889999999999976 577999999887643 5
Q ss_pred ceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCce
Q 014603 184 TVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWR 263 (422)
Q Consensus 184 ~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r 263 (422)
.+.+++++|+||||..+..+++.+|.+--. |.++++||+|-.|. |. ...+.-....++++++.++||.||++|+|
T Consensus 161 iK~~F~tSPgNPtg~~ik~~di~KiLe~p~--nglVVvDEAYidFs--g~-~S~~~lV~kYpNLivlqTlSKsfGLAGiR 235 (375)
T KOG0633|consen 161 IKCIFLTSPGNPTGSIIKEDDILKILEMPD--NGLVVVDEAYIDFS--GV-ESRMKLVKKYPNLIVLQTLSKSFGLAGIR 235 (375)
T ss_pred ceEEEEcCCCCCCcccccHHHHHHHHhCCC--CcEEEEeeeeEeec--cc-cccchHhHhCCceeehhhhhhhcCcceeE
Confidence 789999999999999999999999988443 79999999998854 41 11233344567899999999999999999
Q ss_pred eEEEEeeCCCCcccchhHHHHHHhhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCC
Q 014603 264 LGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPK 343 (422)
Q Consensus 264 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 343 (422)
+|+..++ ..+.+-+....... +.+.....++.+++.+..-..++..+..+.+.+.++...|.++|++.-..
T Consensus 236 vG~~~~~--------~~ia~iln~~KaPY-NiS~~~s~~AL~Als~~n~kkme~~rdaiv~er~RL~keLt~v~~~~~~~ 306 (375)
T KOG0633|consen 236 VGYGAFP--------LSIAEILNRAKAPY-NISVAGSVAALAALSDSNGKKMEDVRDAIVRERERLFKELTEVPFLNDYP 306 (375)
T ss_pred eeccccc--------HHHHHHHHhccCCc-cccchhHHHHHHhcCcccchHHHHHHHHHHHHHHHHHHHhhcCccccCCC
Confidence 9999886 34666555555432 45556667777788754456788888888888999999999998776444
Q ss_pred CCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEec-CCCCCCCCeEEEEeccChHHHHHHHHHHHH
Q 014603 344 KPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLP-GITVGLKDWLRITFAVEPSALEDGLGRMKA 413 (422)
Q Consensus 344 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~-g~~~~~~~~iRis~~~~~~~l~~~~~~l~~ 413 (422)
.+..++|+++++..+. ..-+..+...++-+.||.|+- |+..+..+++||+.+++++. .-+++.|++
T Consensus 307 gg~daNFiLi~v~~~~---n~~akkly~q~at~~gVvVRfrgse~~c~G~lRitvGt~Een-tvL~k~~K~ 373 (375)
T KOG0633|consen 307 GGSDANFILIEVTGGD---NGMAKKLYKQDATKMGVVVRFRGSEEGCKGYLRITVGTPEEN-TVLMKCLKQ 373 (375)
T ss_pred CcccccEEEEEEcCCC---cHHHHHHHHHHHHhcceEEEEcCCccccceeEEEEcCCcccc-hHHHHHHHh
Confidence 6677889998886431 112455666667778999985 55555689999999976432 233444443
No 152
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.97 E-value=1.6e-27 Score=227.61 Aligned_cols=333 Identities=17% Similarity=0.142 Sum_probs=229.1
Q ss_pred CCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCC------CCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEec
Q 014603 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFN------CYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTL 117 (422)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~------~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~ 117 (422)
++.+++|++++ |.++..+|++++++.+++...... .+.......++++.++++++ .+..++++
T Consensus 44 ~~~~~~~~sn~---ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g--------~~~~~~~~ 112 (406)
T PRK13393 44 PREVTVWCSND---YLGMGQHPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHG--------KEAALLFT 112 (406)
T ss_pred CccEEEeeccc---ccCCCCCHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHhC--------CCcEEEeC
Confidence 46789999887 667778999999999998763211 11112235678888888872 24666666
Q ss_pred CHHHHHHHHHHHhcC--CCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhc----CCceEEEEeC
Q 014603 118 GCTQAIEVILTVLAR--PGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALAD----ENTVALVIIN 191 (422)
Q Consensus 118 g~~~a~~~~~~~l~~--~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~----~~~~~i~i~~ 191 (422)
+|++|+..++..+.+ +|+.|++....|..........+.+++.++. .|++.+++.++ ++++++++++
T Consensus 113 SG~~An~~ai~~l~~~~~g~~I~~~~~~H~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~v~~~~ 185 (406)
T PRK13393 113 SGYVSNWAALSTLGSRLPGCVILSDELNHASMIEGIRHSRAEKRIFRH-------NDPADLERKLSDLDPHRPKLVAFES 185 (406)
T ss_pred CcHHHHHHHHHHhhcCCCCCEEEEccchhHHHHHHHHHcCCeEEEeCC-------CCHHHHHHHHHhccCCCCEEEEEcC
Confidence 667799999987655 6787777788887777777777777666553 25566666553 3567888889
Q ss_pred CCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCC-CeEEEecCccccCCCCceeEEEEee
Q 014603 192 PGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIV-PVLTLGSISKRWIVPGWRLGWLVTS 270 (422)
Q Consensus 192 p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~-~~i~i~s~sK~~~~~G~r~G~~~~~ 270 (422)
++|++|.+.+ +++|.++|+++|+++|+||+|+...++..+.......+..+ ..++++||||.|+++| ||++++
T Consensus 186 v~~~~G~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~tlsKa~g~~G---G~~~~~ 259 (406)
T PRK13393 186 VYSMDGDIAP---IAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEGTLAKAFGVMG---GYITGS 259 (406)
T ss_pred CCCCCCchhC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCCCCCeEEEEeCchhhcccC---ceeeCC
Confidence 9999999965 88888999999999999999974333222111111122112 2477799999998888 898875
Q ss_pred CCCCcccchhHHHHHHhhhh---hccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCC
Q 014603 271 DPNGILQDSGIVDSIKSFLN---ISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEG 347 (422)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~ 347 (422)
+++.+.+..... .+.+.++..++++.++|+...+. ...++++.++.+++.+.|+++ ++.++ .+ .
T Consensus 260 --------~~~~~~l~~~~~~~~~t~~~~p~~~aa~~aaL~~~~~~--~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~-~ 326 (406)
T PRK13393 260 --------AALCDFIRSFASGFIFTTSLPPAVAAGALASVRHLKAS--SAERERHQDRVARLRARLDKA-GIPHL-PN-P 326 (406)
T ss_pred --------HHHHHHHHHhCcCceecCccCHHHHHHHHHHHHHHhhC--HHHHHHHHHHHHHHHHHHHHc-CCCcC-CC-C
Confidence 467776665432 23455667788888888753222 123456778888999999886 66522 33 3
Q ss_pred ceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC---CCeEEEEec--cChHHHHHHHHHHHHHHHHh
Q 014603 348 SMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL---KDWLRITFA--VEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 348 g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~---~~~iRis~~--~~~~~l~~~~~~l~~~~~~~ 418 (422)
+.++.+.++.. ....++...+++++||.+.++..+.. .+++||+++ ++++++++++++|+++++++
T Consensus 327 ~~i~~v~~~~~-----~~~~~l~~~L~~~~Gi~v~~~~~p~~p~g~~~iRis~~~~~t~edid~l~~~l~~~~~~~ 397 (406)
T PRK13393 327 SHIVPVMVGDP-----VLCKQISDELLDRYGIYVQPINYPTVPRGTERLRITPSPLHTDADIEHLVQALSEIWARL 397 (406)
T ss_pred CCeEEEEeCCH-----HHHHHHHHHHHHhCCEEEEeECCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhc
Confidence 55555544321 02456666666657999998755432 368999998 78999999999999988764
No 153
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.97 E-value=1.1e-27 Score=225.43 Aligned_cols=322 Identities=14% Similarity=0.125 Sum_probs=220.0
Q ss_pred CCCcHHHHHHHHHHhhCCCCC-------CCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCC
Q 014603 61 FRTASVAVDAIVHSVRSARFN-------CYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARP 133 (422)
Q Consensus 61 ~~~~~~v~~a~~~~~~~~~~~-------~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~ 133 (422)
-+..+++.+++.+........ .+.......++++++++++ ++ +++++++|+++++..++.+++++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~--~~i~~~~g~t~al~~~l~~~~~~ 82 (361)
T cd06452 11 GRLTPEARKALIEWGDGYSVCDFCRGRLDEIEKPPIKDFHHDLAEFL------GM--DEARVTPGAREGKFAVMHSLCEK 82 (361)
T ss_pred CCCCHHHHHHHHHHhcccCCccccccccccccCchHHHHHHHHHHHc------CC--ceEEEeCCHHHHHHHHHHHhcCC
Confidence 366788999998887431110 1111134678999999988 33 78999999999999999999999
Q ss_pred CCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhc-------CCceEEEEeCCCCCcccccCHHHHH
Q 014603 134 GANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALAD-------ENTVALVIINPGNPCGNVYTYQHLQ 206 (422)
Q Consensus 134 gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-------~~~~~i~i~~p~nptG~~~~~~~l~ 206 (422)
||+|+++.++|.+....++..|++++.++.++..++.+|++.+++.++ ++++++++++|+||||.. .+++
T Consensus 83 gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~---~~~~ 159 (361)
T cd06452 83 GDWVVVDGLAHYTSYVAAERAGLNVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNL---HDAK 159 (361)
T ss_pred CCEEEEcCCcchHHHHHHHhcCCEEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeee---ccHH
Confidence 999999999988777778889999999988654456799999998775 367899999999999988 6788
Q ss_pred HHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHH
Q 014603 207 KIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIK 286 (422)
Q Consensus 207 ~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~ 286 (422)
+|.++|+++|+++|+|++|+. +....+...++. .++++|+||+++ ++.|+||++++ +++++++.
T Consensus 160 ~i~~~~~~~~~~vivD~a~~~----g~~~~~~~~~~~---d~~~~s~~K~l~-~~~~~G~l~~~--------~~~~~~l~ 223 (361)
T cd06452 160 KIAKVCHEYGVPLLLNGAYTV----GRMPVSGKELGA---DFIVGSGHKSMA-ASAPIGVLATT--------EEWADIVF 223 (361)
T ss_pred HHHHHHHHcCCeEEEECCccc----CCcCCCHHHcCC---CEEEecCCcccc-CCCCeEEEEEC--------HHHHHHHh
Confidence 999999999999999999975 221122223332 389999999986 45599999986 35667665
Q ss_pred hhhhh---------ccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCC-CCCCceEEEEecC
Q 014603 287 SFLNI---------SSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPK-KPEGSMFVMVKLN 356 (422)
Q Consensus 287 ~~~~~---------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~g~~~~~~~~ 356 (422)
..... ..+.....+.++.++++.. ...++.. .+..++++++.+.|++++++.++. .+....++.++.+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~-~~~~~~~-~~~~~~~~~l~~~L~~l~g~~v~~~~~~~~n~~~~~~~ 301 (361)
T cd06452 224 RTSQMFKIKEVELLGCTLRGAPLVTLMASFPHV-KERVKRW-DEEVEKARWFVAELEKIEGIKQLGEKPKNHDLMFFETP 301 (361)
T ss_pred ccccccccceeeeeccccCchHHHHHHHHHHHH-HHHHHHH-HHHHHHHHHHHHHHhcCCCeEEECCCCCCCceEEEEcC
Confidence 43321 0111112233334444321 1223333 333345578899999998876331 2334556666654
Q ss_pred cccc---cCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec-cChHHHHHHHHHHHHHH
Q 014603 357 YSLL---EGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA-VEPSALEDGLGRMKAFY 415 (422)
Q Consensus 357 ~~~~---~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~-~~~~~l~~~~~~l~~~~ 415 (422)
.... .......++...| +++||.+.. .+..+++|++.. .++++++.+++.|+++.
T Consensus 302 ~~~~~~~~~~~~~~~~~~~L-~~~gI~~~~---~~~~~~~ri~~~g~~~e~~~~l~~al~~~~ 360 (361)
T cd06452 302 SFDEIAKKHKRRGYFLYSEL-KKRGIHGIK---PGLTRYFKLSTYGLTWEQVEYVVDAFKEIA 360 (361)
T ss_pred CcchhhhhccccchhHHHHH-HHcCceEEc---CCCceEEEEEecCCCHHHHHHHHHHHHHHh
Confidence 1000 0001223566666 556998532 234568999984 68899999999998654
No 154
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.97 E-value=7.7e-28 Score=228.81 Aligned_cols=335 Identities=18% Similarity=0.160 Sum_probs=225.3
Q ss_pred cCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCC-CCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHH
Q 014603 42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFN-CYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT 120 (422)
Q Consensus 42 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~-~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~ 120 (422)
.+|+.++||..|......+ ..+|.+.+++.++++..... .+.......++.++++++. ..+.++++++|+
T Consensus 37 ~~G~~~lD~~~g~~~~~lG-h~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--------~~~~~~~~~SGs 107 (396)
T PRK04073 37 PEGNRYMDMLSAYSAVNQG-HRHPKIIQALKDQADKVTLTSRAFHSDQLGPWYEKVAKLT--------GKDMVLPMNTGA 107 (396)
T ss_pred CCCCEEEEcCCCHHhccCC-CCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhcC--------CCCeEEEcCChH
Confidence 3688999998886553222 45799999999998753221 1111112234555555543 236899999999
Q ss_pred HHHHHHHHHhcC---------CC-CEEEecCCCccchHHHHhh-CCCeEE---EeeccCC---CCcccCHHHHHHhhcCC
Q 014603 121 QAIEVILTVLAR---------PG-ANILLPRPGFPYYEARATH-SHLEVR---HFDLLPA---KGWEVDLDAVEALADEN 183 (422)
Q Consensus 121 ~a~~~~~~~l~~---------~g-d~Vl~~~~~~~~~~~~~~~-~g~~~~---~~~~~~~---~~~~~d~~~l~~~~~~~ 183 (422)
+|++.++..... +| ++|+..+.+||+....+.. .+.... ..+..+. -.+ .|++.+++.++++
T Consensus 108 eA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~l~~~i~~~ 186 (396)
T PRK04073 108 EAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPY-GDLEALKAAITPN 186 (396)
T ss_pred HHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCC-CCHHHHHHhcccC
Confidence 999999887631 34 6889888888876543322 221100 0000000 001 2788999888777
Q ss_pred ceEEEEeCCCCCcccccCH-HHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCc
Q 014603 184 TVALVIINPGNPCGNVYTY-QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGW 262 (422)
Q Consensus 184 ~~~i~i~~p~nptG~~~~~-~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~ 262 (422)
++++++..++||+|.+++. +++++|.++|+++|+++|+||+|.++.++|.... ....+..++ +.++||.++++|+
T Consensus 187 ~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~-~~~~~~~pd---i~~~sK~lg~gg~ 262 (396)
T PRK04073 187 TAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGKLFA-CDWDNVTPD---MYILGKALGGGVF 262 (396)
T ss_pred eEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcHHHH-hhhcCCCCC---EEEecccccCCCC
Confidence 8777777778999998765 4699999999999999999999998776654221 111222222 3357899998889
Q ss_pred eeEEEEeeCCCCcccchhHHHHHHhhh-hhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcC--CCC
Q 014603 263 RLGWLVTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEI--PCI 339 (422)
Q Consensus 263 r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--~~~ 339 (422)
|+||++++ +++++.+.... ..+.+.+++.++++.++|+...+ +...++.+++.+++.+.|+++ +.+
T Consensus 263 ~ig~~~~~--------~~i~~~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~---~~l~~~~~~~~~~l~~~L~~l~~~~i 331 (396)
T PRK04073 263 PISCVAAN--------RDILGVFTPGSHGSTFGGNPLACAVSIAALEVLEE---EKLPERSLELGEYFKEQLKEIDNPMI 331 (396)
T ss_pred cceEEEEc--------HHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHhhcCCcc
Confidence 99999986 46777765432 23446788999999999975322 234456667788888888875 223
Q ss_pred CCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHHHHHHH
Q 014603 340 TCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGRMKAFY 415 (422)
Q Consensus 340 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~l~~~~ 415 (422)
. . .+..|.++++.++. ++.++..++ .++||.+.+.. .+++|++++ .+++++++++++|++++
T Consensus 332 ~-~-~~~~g~~~~~~~~~-------~~~~~~~~l-~~~Gv~~~~~~----~~~iRi~p~l~~t~e~i~~~~~~l~~~l 395 (396)
T PRK04073 332 K-E-VRGRGLFIGVELNE-------PARPYCEAL-KEEGLLCKETH----ETVIRFAPPLVITKEELDWAFEKIKAVL 395 (396)
T ss_pred c-c-eecceEEEEEEecc-------hHHHHHHHH-HHCCeEEecCC----CCEEEEECCcccCHHHHHHHHHHHHHHh
Confidence 2 2 23346778887753 355666665 55699997642 478999975 79999999999999875
No 155
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.97 E-value=1.9e-27 Score=226.61 Aligned_cols=336 Identities=17% Similarity=0.180 Sum_probs=228.0
Q ss_pred cCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCC-CCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHH
Q 014603 42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFN-CYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT 120 (422)
Q Consensus 42 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~-~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~ 120 (422)
.+|+.+|||..|....+.++ .+|++.+++.+++.+.... .........++.+.++++. ..+.++++++|+
T Consensus 37 ~dG~~~iD~~~~~~~~~lGh-~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--------~~~~~~~~~sGs 107 (403)
T PRK05093 37 QQGKEYIDFAGGIAVTALGH-CHPALVKALKEQGEKLWHISNVFTNEPALRLAKKLIDAT--------FAERVFFANSGA 107 (403)
T ss_pred CCCCEEEEcCcCHHhccCCC-CCHHHHHHHHHHHHhcCcccCccCCHHHHHHHHHHHhhC--------CCCEEEEeCchH
Confidence 36888999988865544554 7899999999998752111 1111111234444444432 236899999999
Q ss_pred HHHHHHHHHhc--------CCCCEEEecCCCccchHHHHhhCCC-------------eEEEeeccCCCCcccCHHHHHHh
Q 014603 121 QAIEVILTVLA--------RPGANILLPRPGFPYYEARATHSHL-------------EVRHFDLLPAKGWEVDLDAVEAL 179 (422)
Q Consensus 121 ~a~~~~~~~l~--------~~gd~Vl~~~~~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~d~~~l~~~ 179 (422)
+|++.+++... ...++|+..+.+||+....+...+. ++..++ .-|++.+++.
T Consensus 108 eA~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~d~~~l~~~ 180 (403)
T PRK05093 108 EANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVP-------FNDLAAVKAV 180 (403)
T ss_pred HHHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeC-------CCCHHHHHHH
Confidence 99999998642 1236788889889886543322111 111111 1278899988
Q ss_pred hcCCceEEEEeCCCCCccccc--CHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCcccc
Q 014603 180 ADENTVALVIINPGNPCGNVY--TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRW 257 (422)
Q Consensus 180 ~~~~~~~i~i~~p~nptG~~~--~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~ 257 (422)
+.+++++++++ |.||+|.++ +.+.+++|.++|++||+++|+||+|+++.++|... +....+..++ +.|+||.+
T Consensus 181 l~~~~aaiiie-p~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~-~~~~~~~~pd---i~s~sK~l 255 (403)
T PRK05093 181 IDDHTCAVVVE-PIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDLF-AYMHYGVTPD---ILTSAKAL 255 (403)
T ss_pred hcCCeEEEEEe-cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccch-hhhhcCCCCC---EEEecccc
Confidence 87666666555 877777654 88999999999999999999999999887777532 2222222222 56889998
Q ss_pred CCCCceeEEEEeeCCCCcccchhHHHHHHhhh-hhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcC
Q 014603 258 IVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEI 336 (422)
Q Consensus 258 ~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 336 (422)
+ +|+|+||++++ +++++.+.... ..+.+.+++.|+++.++|+... -.+..++++++.+.+.+.|+++
T Consensus 256 ~-~G~rig~vv~~--------~~i~~~l~~~~~~~t~~~~~~~~~aa~a~L~~~~---~~~~~~~~~~~~~~l~~~L~~~ 323 (403)
T PRK05093 256 G-GGFPIGAMLTT--------AEIASHFKVGTHGSTYGGNPLACAVAEAVFDIIN---TPEVLEGVKARRQRFVDGLQKI 323 (403)
T ss_pred c-CCcceEEEEEc--------HHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHh---hccHHHHHHHHHHHHHHHHHHH
Confidence 6 89999999996 46777775432 3345678889999999886532 2345577888888888888875
Q ss_pred C-CCCC-CCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHHHH
Q 014603 337 P-CITC-PKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGRMK 412 (422)
Q Consensus 337 ~-~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~l~ 412 (422)
. ...+ ...+..|.++|+.++... ...+.++...++ ++||.+.|+. .+++|++++ .++++|++++++|.
T Consensus 324 ~~~~~~~~~~~~~G~~~~~~l~~~~---~~~~~~~~~~l~-~~Gv~v~~~g----~~~lRl~~~~~~~~~~i~~~~~~l~ 395 (403)
T PRK05093 324 NQKYGVFSEIRGMGLLIGAELKPQY---KGRARDFLNAAA-EEGVMVLVAG----PDVLRFAPSLVIEEADIDEGLARFE 395 (403)
T ss_pred HhhCCCeEeEeeCceEEEEEecCcc---hhHHHHHHHHHH-HCCeEEecCC----CCEEEEeCCCCCCHHHHHHHHHHHH
Confidence 1 1111 123456889998886321 012456666664 4699998743 478999876 68999999999999
Q ss_pred HHHHHh
Q 014603 413 AFYDRH 418 (422)
Q Consensus 413 ~~~~~~ 418 (422)
+++.++
T Consensus 396 ~~l~~~ 401 (403)
T PRK05093 396 KAVAKV 401 (403)
T ss_pred HHHHHh
Confidence 998764
No 156
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.97 E-value=5.5e-28 Score=232.20 Aligned_cols=347 Identities=18% Similarity=0.182 Sum_probs=227.1
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 122 (422)
+|..+|||..|......+ ..+|.+.+++.+++... ..|....+..+....+++.+.+.++ ...+++++++|+++|
T Consensus 34 dG~~~id~~~~~~~~~lG-~~~p~v~~a~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~sgsea 108 (413)
T cd00610 34 DGNRYLDFLSGIGVLNLG-HNHPEVVEALKEQLAKL--THFSLGFFYNEPAVELAELLLALTP--EGLDKVFFVNSGTEA 108 (413)
T ss_pred CCCEEEEcCccHHhhccC-CCCHHHHHHHHHHHHhC--cCccCcccCCHHHHHHHHHHHHhCC--CCCCEEEEcCcHHHH
Confidence 688999999875432222 26889999999998653 2444322233444444444444333 357899999999999
Q ss_pred HHHHHHHhc--CCCCEEEecCCCccchHHHHhhCC-------------CeEEEeeccCC----CCcccCHHHHHHhhcC-
Q 014603 123 IEVILTVLA--RPGANILLPRPGFPYYEARATHSH-------------LEVRHFDLLPA----KGWEVDLDAVEALADE- 182 (422)
Q Consensus 123 ~~~~~~~l~--~~gd~Vl~~~~~~~~~~~~~~~~g-------------~~~~~~~~~~~----~~~~~d~~~l~~~~~~- 182 (422)
+..+++.+. .++++|++.+++|+++...+.... .++..++.+.. ..+..|++.|++.+++
T Consensus 109 ~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~ 188 (413)
T cd00610 109 VEAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEEH 188 (413)
T ss_pred HHHHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhcC
Confidence 999998773 567999999999998755443322 12344443311 1234488899888865
Q ss_pred -CceEEEEeCC-CCCccccc-CHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCC
Q 014603 183 -NTVALVIINP-GNPCGNVY-TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIV 259 (422)
Q Consensus 183 -~~~~i~i~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~ 259 (422)
+...+++++| ++++|..+ +.+++++|.++|++||+++|+||+|+++.+.+... .....+..++ +.|+||.++.
T Consensus 189 ~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g~~~-~~~~~~~~~d---~~t~sK~l~~ 264 (413)
T cd00610 189 PEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGKMF-AFEHFGVEPD---IVTLGKGLGG 264 (413)
T ss_pred CCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchh-hHhhcCCCCC---eEEEcccccC
Confidence 3455666666 56779865 67779999999999999999999999765544321 1122222222 4478899865
Q ss_pred CCceeEEEEeeCCCCcccchhHHHHH--Hhhh-hhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcC
Q 014603 260 PGWRLGWLVTSDPNGILQDSGIVDSI--KSFL-NISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEI 336 (422)
Q Consensus 260 ~G~r~G~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 336 (422)
|+|+||++++ +++++.+ .... ..+.+.+++.+.++.++|+...+ .+..++++++.+++++.|+++
T Consensus 265 -g~~~g~~~~~--------~~~~~~~~~~~~~~~~t~~~~~~~~~a~~a~l~~l~~---~~~~~~~~~~~~~l~~~l~~~ 332 (413)
T cd00610 265 -GLPLGAVLGR--------EEIMDAFPAGPGLHGGTFGGNPLACAAALAVLEVLEE---EGLLENAAELGEYLRERLREL 332 (413)
T ss_pred -ccccEEEEEc--------HHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHH
Confidence 7999999985 4677775 2222 23446677888888888865322 345666777777777777654
Q ss_pred CCC-CC-CCCCCCceEEEEecCcccc---cCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHH
Q 014603 337 PCI-TC-PKKPEGSMFVMVKLNYSLL---EGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLG 409 (422)
Q Consensus 337 ~~~-~~-~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~ 409 (422)
... .. ...+..|.++++.++.... ........+...+ .++||.+.|+. .+.+|++++ +++++++++++
T Consensus 333 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gv~v~~~~----~~~lR~~~~~~~t~~~i~~~~~ 407 (413)
T cd00610 333 AEKHPLVGDVRGRGLMIGIELVKDRATKPPDKELAAKIIKAA-LERGLLLRPSG----GNVIRLLPPLIITEEEIDEGLD 407 (413)
T ss_pred HhhCCcEEEeecCceEEEEEEecCCCcCCcchHHHHHHHHHH-HHCCeEEeecC----CCEEEEECCCcCCHHHHHHHHH
Confidence 210 10 1123446788887754200 0001234555555 56699999975 578999987 68999999999
Q ss_pred HHHHHH
Q 014603 410 RMKAFY 415 (422)
Q Consensus 410 ~l~~~~ 415 (422)
+|++++
T Consensus 408 ~l~~~l 413 (413)
T cd00610 408 ALDEAL 413 (413)
T ss_pred HHHHhC
Confidence 998763
No 157
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.96 E-value=4.7e-27 Score=221.28 Aligned_cols=316 Identities=17% Similarity=0.146 Sum_probs=223.4
Q ss_pred CCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCC--CEEEecCHHHHHHHHHHHhcCCCCEEEe
Q 014603 62 RTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPD--DVYLTLGCTQAIEVILTVLARPGANILL 139 (422)
Q Consensus 62 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~--~i~~~~g~~~a~~~~~~~l~~~gd~Vl~ 139 (422)
.+++.+++++...... ....|. ....++|+.++++++ ++++ .|++++|+++++..++.+++.++|+|++
T Consensus 9 ~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~la~~~~------~~~~~~~i~~~~~gt~~l~~~~~~~~~~~~~vi~ 79 (355)
T TIGR03301 9 STSATVRDAMLVDWCH-WDSEFN--DVTDQVRDRLLALAG------GDDNHTCVLLQGSGTFAVEATIGSLVPRDGKLLV 79 (355)
T ss_pred CCCHHHHHHhhhhccC-CCHHHH--HHHHHHHHHHHHHhc------CCCCCcEEEEeCCcHHHHHHHHHhccCCCCeEEE
Confidence 5678899988874322 111233 336678888888873 3443 6788999999999999999888888777
Q ss_pred cCCCccc--hHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC--CceEEEEeCCCCCcccccCHHHHHHHHHHHHHc
Q 014603 140 PRPGFPY--YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE--NTVALVIINPGNPCGNVYTYQHLQKIAETAKKL 215 (422)
Q Consensus 140 ~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~--~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~ 215 (422)
..+.+++ +...++..|.+++.++.++ ++.+|++.+++.+++ +.+.+++++++||+|... ++++|.++|+++
T Consensus 80 ~~~~~~~~~~~~~a~~~g~~~~~i~~~~--~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G~~~---~~~~i~~l~~~~ 154 (355)
T TIGR03301 80 LINGAYGERLAKICEYLGIPHTDLNFSE--YEPPDLNRIEEALAADPDITHVATVHHETTTGILN---PLEAIAKVARSH 154 (355)
T ss_pred ECCCchhhHHHHHHHHcCCceEEEecCC--CCCCCHHHHHHHHHhCCCceEEEEEecCCcccchh---HHHHHHHHHHHc
Confidence 6665544 4566778899998888643 456899999998864 455677888999999985 478999999999
Q ss_pred CcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCcccc-CCCCceeEEEEeeCCCCcccchhHHHHHHhh------
Q 014603 216 GIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRW-IVPGWRLGWLVTSDPNGILQDSGIVDSIKSF------ 288 (422)
Q Consensus 216 ~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~-~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~------ 288 (422)
|+++|+|++++.. ....++..++. .++++|++|++ +++| +||++++ +++++.+...
T Consensus 155 ~~~livD~~~s~g----~~~~~~~~~~~---d~~~~s~~K~l~~~~G--~g~~~~~--------~~~~~~~~~~~~~~~~ 217 (355)
T TIGR03301 155 GAVLIVDAMSSFG----AIPIDIEELDV---DALIASANKCLEGVPG--FGFVIAR--------RDLLEASAGNARSLYL 217 (355)
T ss_pred CCEEEEEeccccC----CcccchhhcCc---cEEEecCCcccccCCc--eeEEEEC--------HHHHHHhhCCCCCcee
Confidence 9999999987652 22223333333 38889999985 4456 7999986 3555554410
Q ss_pred ------------hhhccCcchHHHHHHHHHHhhchHH-HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC--CCceEEEE
Q 014603 289 ------------LNISSDPATFIQGAVPQILEKTEEE-FFSKITDILRETADICCDRLKEIPCITCPKKP--EGSMFVMV 353 (422)
Q Consensus 289 ------------~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~--~~g~~~~~ 353 (422)
....++++...+.++.++++...+. ++++..++++++++.+.+.|+++ ++.+...+ .++.++++
T Consensus 218 ~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~-g~~~~~~~~~~~~~~~~~ 296 (355)
T TIGR03301 218 DLYDQWAYMEKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRAL-GFQPLLPERWQSPIIVSF 296 (355)
T ss_pred eHHHHHHHhhhcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHc-CCeeecCCCCCCCcEEEE
Confidence 0112356777777777777754333 37888889999999999999887 66533222 23456777
Q ss_pred ecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHHHHHH
Q 014603 354 KLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGRMKAF 414 (422)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~l~~~ 414 (422)
.++... . .+..++...+ .++||.+.+|..+.. +++||++. +++++++++++.|+++
T Consensus 297 ~~~~~~--~-~~~~~~~~~l-~~~gi~i~~~~~~~~-~~iRis~~~~~~~~~i~~~~~~l~~~ 354 (355)
T TIGR03301 297 LYPDDP--D-FDFDDFYQEL-KERGFVIYPGKLTLA-DTFRIGTIGEIDAADIERLLEAIKDA 354 (355)
T ss_pred ECCCCC--c-chHHHHHHHH-HHCCEEEECCccccc-cEEEEecCCCCCHHHHHHHHHHHHhh
Confidence 776410 0 1334555555 667999999875543 79999985 6899999999999875
No 158
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.96 E-value=1.2e-26 Score=219.91 Aligned_cols=338 Identities=15% Similarity=0.105 Sum_probs=227.2
Q ss_pred CCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCC-------CCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEe
Q 014603 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARF-------NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLT 116 (422)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~-------~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~ 116 (422)
..++||++ |.... -|+++++++++.+....... ..+.....+.++|+.+|++++ . ++++++
T Consensus 17 ~~~~~~~~---~~~~~-~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~g------~--~~~~~~ 84 (387)
T PRK09331 17 EEEFINLD---PIQRG-GILTPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFLG------M--DEARVT 84 (387)
T ss_pred cccccccC---hhhcC-CCCCHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHhC------C--CcEEEe
Confidence 34567764 33222 36788999999988743211 011122357899999999983 2 468899
Q ss_pred cCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC-------CceEEEE
Q 014603 117 LGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE-------NTVALVI 189 (422)
Q Consensus 117 ~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-------~~~~i~i 189 (422)
+|+++++..++.+++++||+|+++.++|.+....++..|++++.++...+.++.+|++.+++.+++ +++++++
T Consensus 85 ~g~t~a~~~al~~l~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l 164 (387)
T PRK09331 85 HGAREGKFAVMHSLCKKGDYVVLDGLAHYTSYVAAERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALL 164 (387)
T ss_pred CCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEE
Confidence 999999999999999999999999999988877788899999999874234567899999988753 6889999
Q ss_pred eCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEe
Q 014603 190 INPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVT 269 (422)
Q Consensus 190 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~ 269 (422)
++|+|++|.. .++++|.++|+++|+++|+|++|+. |..+.+...++.+ +++.|++|+++ .+.++|++++
T Consensus 165 ~~~~~~tG~~---~~l~~I~~la~~~g~~livD~a~~~----g~~~~~~~~~g~D---~~~~s~~K~l~-~~~~~G~l~~ 233 (387)
T PRK09331 165 THVDGNYGNL---ADAKKVAKVAHEYGIPFLLNGAYTV----GRMPVDGKKLGAD---FIVGSGHKSMA-ASAPSGVLAT 233 (387)
T ss_pred ECCCCCCccc---ccHHHHHHHHHHcCCEEEEECCccc----CCcCCCHHHcCCC---EEEeeCccccc-CCCCEEEEEE
Confidence 9999999988 5688999999999999999999985 3222233333333 88999999975 4458999988
Q ss_pred eCCCCcccchhHHHHHHhhhh---------hccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 014603 270 SDPNGILQDSGIVDSIKSFLN---------ISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCIT 340 (422)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 340 (422)
+ +++++.+..... ...+.......++..+++... ... +..++..++.+++++.|+++++++
T Consensus 234 ~--------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aal~~~~-~~~-~~~~~~~~~~~~l~~~L~~l~g~~ 303 (387)
T PRK09331 234 T--------EEYADKVFRTSRKFGVKEVELLGCTLRGAPLVTLMASFPHVV-ERV-KRWDEEVKKARWFVDELEKIEGFK 303 (387)
T ss_pred C--------HHHHhhcccccCCCcccceeeeceecCchHHHHHHHHHHHHH-HHH-HHHHHHHHHHHHHHHHHhcCCCEE
Confidence 6 355665543211 111122222333333343211 122 234555677778999999998887
Q ss_pred CCCC-CCCceEEEEecCccc---ccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec-cChHHHHHHHHHHHHHH
Q 014603 341 CPKK-PEGSMFVMVKLNYSL---LEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA-VEPSALEDGLGRMKAFY 415 (422)
Q Consensus 341 ~~~~-~~~g~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~-~~~~~l~~~~~~l~~~~ 415 (422)
+... +....+..+..+... ........++...| +++||...+. +....+|+... .++++++++++.|++++
T Consensus 304 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~L-~~~gI~~~~~---~~~~i~ri~~~g~t~~di~~l~~aL~~i~ 379 (387)
T PRK09331 304 QLGEKPRNHDLMKFETPSFDEIAKKHKRRGFFLYEEL-KKRGIHGIKP---GATKEFKLSTYGLTWEQVEYVADAFKEIA 379 (387)
T ss_pred EeccCcCcCCeEEEeCCchhHHhhhccccchhHHHHH-HHcCceEEcc---CCceEEEEEeccCCHHHHHHHHHHHHHHH
Confidence 3311 233445445544110 00011234466665 5679984432 12456777763 78999999999999988
Q ss_pred HHh
Q 014603 416 DRH 418 (422)
Q Consensus 416 ~~~ 418 (422)
+++
T Consensus 380 ~~~ 382 (387)
T PRK09331 380 EKY 382 (387)
T ss_pred Hhc
Confidence 764
No 159
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.96 E-value=6.6e-27 Score=223.55 Aligned_cols=330 Identities=20% Similarity=0.227 Sum_probs=223.0
Q ss_pred CCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCC-----CCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecC
Q 014603 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSS-----TVGILPARRAIADYLNRDLPYKLSPDDVYLTLG 118 (422)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~-----~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g 118 (422)
+..+++|+.|.|. ++.|+.+.+++.+. . ....|.+ ..|.+++++.+++++.+.+|. +.++++++++
T Consensus 19 ~~~~~~l~~g~~~----~~~p~~~~~~~~~~--~-~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~--~~~~v~~~~~ 89 (398)
T cd00613 19 DQSMSFLGSGTYK----HNPPAVIKRNILEN--E-FYTAYTPYQPEISQGRLQALFELQTMLCELTGM--DVANASLQDE 89 (398)
T ss_pred ccCcccccccccC----CcCcHHHHHHhccc--c-CcccCCCCChhhhhhHHHHHHHHHHHHHHHHCC--CccceeccCc
Confidence 4456999999966 56666666655554 2 2234555 678899999999999887763 4446777765
Q ss_pred HH-HHHHHHHHHhcCC--CCEEEecCCCccchHHHHhhCC----CeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeC
Q 014603 119 CT-QAIEVILTVLARP--GANILLPRPGFPYYEARATHSH----LEVRHFDLLPAKGWEVDLDAVEALADENTVALVIIN 191 (422)
Q Consensus 119 ~~-~a~~~~~~~l~~~--gd~Vl~~~~~~~~~~~~~~~~g----~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~ 191 (422)
++ ++...+..++..+ ||+|+++++.|+.+...+...+ .+++.++..+ ++.+|++.+++.+.++++++++++
T Consensus 90 g~~~~~~~~~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~t~~viv~~ 167 (398)
T cd00613 90 ATAAAEAAGLAAIRAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDE--GGTVDLEALKEEVSEEVAALMVQY 167 (398)
T ss_pred hHHHHHHHHHHHHhcccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEeccCC--CCCcCHHHHHHhcCCCeEEEEEEC
Confidence 55 4545555555665 9999999999998877777666 8888887643 346899999999988899999998
Q ss_pred CCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCC----CceeEEE
Q 014603 192 PGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVP----GWRLGWL 267 (422)
Q Consensus 192 p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~----G~r~G~~ 267 (422)
|+ |+|.+. +.+++|.++|+++|+++|+|+++.... ........+. .+++.|++|++ +| |+++|++
T Consensus 168 ~~-~~G~~~--~~l~~i~~la~~~g~~livD~~~~~~~----~~~~~~~~~~---d~~~~s~~K~~-~p~g~Ggp~~g~l 236 (398)
T cd00613 168 PN-TLGVFE--DLIKEIADIAHSAGALVYVDGDNLNLT----GLKPPGEYGA---DIVVGNLQKTG-VPHGGGGPGAGFF 236 (398)
T ss_pred CC-CCceec--chHHHHHHHHHhcCCEEEEEecccccc----CCCChHHcCC---CEEEeeccccC-CCCCCCCCceeEE
Confidence 85 899883 457999999999999999999876422 1111222333 38999999997 55 7889999
Q ss_pred EeeCCCCcccchhHHHHHHhh------------------------------hhhccCcchHHHHHHHHHHhhchHHHHHH
Q 014603 268 VTSDPNGILQDSGIVDSIKSF------------------------------LNISSDPATFIQGAVPQILEKTEEEFFSK 317 (422)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~ 317 (422)
+.++ ++.+.+... .....+.+.....++...+....+.++++
T Consensus 237 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~~~~g~~~ 308 (398)
T cd00613 237 AVKK--------ELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYLGPEGLKE 308 (398)
T ss_pred EEhh--------hhHhhCCCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHHhCHHHHHH
Confidence 9863 344432110 00011222333333333444334567888
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceE--EEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEE
Q 014603 318 ITDILRETADICCDRLKEIPCITCPKKPEGSMF--VMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRI 395 (422)
Q Consensus 318 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi 395 (422)
..++++++++++++.|+++++.. .+.+..+ +++.++... + .+..++...| .++||.+.... ....+.+|+
T Consensus 309 ~~~~~~~~~~~l~~~L~~~~~~~---~~~~~~~~~v~~~~~~~~--~-~~~~~~~~~L-~~~gi~~~~~~-~~~~~~lRi 380 (398)
T cd00613 309 IAERAHLNANYLAKRLKEVGGVL---PFNGPFFHEFVLRLPPLY--G-IRAEDLAKAL-IDGGFHAPTMY-LPVDGTLMI 380 (398)
T ss_pred HHHHHHHHHHHHHHHHHhcCCcc---cCCCCeeEEEEEEcCCcc--h-HHHHHHHHhh-hhcCccccccc-cCCCCeEEE
Confidence 89999999999999999885443 2222222 455554210 0 1355666666 45688765422 123578999
Q ss_pred Eec--cChHHHHHHHHHH
Q 014603 396 TFA--VEPSALEDGLGRM 411 (422)
Q Consensus 396 s~~--~~~~~l~~~~~~l 411 (422)
+++ ++++||+++++.|
T Consensus 381 s~~~~~t~edid~~~~~L 398 (398)
T cd00613 381 EPTETETKEELDALLEAL 398 (398)
T ss_pred EcCCCCCHHHHHHHHHhC
Confidence 998 7899999998764
No 160
>PRK14012 cysteine desulfurase; Provisional
Probab=99.96 E-value=9.2e-27 Score=222.30 Aligned_cols=336 Identities=15% Similarity=0.158 Sum_probs=226.3
Q ss_pred ceeecCCCCCCCCCCCCcHHHHHHHHHHhh--CCCCCCCC--------CCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEe
Q 014603 47 LIPLGHGDPSAFPSFRTASVAVDAIVHSVR--SARFNCYS--------STVGILPARRAIADYLNRDLPYKLSPDDVYLT 116 (422)
Q Consensus 47 ~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~--~~~~~~y~--------~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~ 116 (422)
.|.|+++.++ ++++.+.+++.+++. ....+... ....+.++|+.+++++ +.++++++++
T Consensus 4 ~iyld~a~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~------g~~~~~v~~~ 72 (404)
T PRK14012 4 PIYLDYSATT-----PVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLI------GADPREIVFT 72 (404)
T ss_pred eEEecCcCCC-----CCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHc------CcCcCeEEEe
Confidence 3788888755 677899999988875 21111110 0123567788888888 4577889999
Q ss_pred cCHHHHHHHHHHHhc----CCCCEEEecCCCccchHHHH---hhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEE
Q 014603 117 LGCTQAIEVILTVLA----RPGANILLPRPGFPYYEARA---THSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVI 189 (422)
Q Consensus 117 ~g~~~a~~~~~~~l~----~~gd~Vl~~~~~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i 189 (422)
+|+|++++.++.++. ++||+|+++.++|++....+ +..|++++.++.++ ++.+|++.|++.++++++++++
T Consensus 73 ~g~t~al~~~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~~~--~g~~d~~~l~~~i~~~t~lv~~ 150 (404)
T PRK14012 73 SGATESDNLAIKGAAHFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLDPQS--NGIIDLEKLEAAMRDDTILVSI 150 (404)
T ss_pred CCHHHHHHHHHHHHHHhhcCCCCEEEEecCccHHHHHHHHHHHhCCCEEEEEccCC--CCcCCHHHHHHhcCCCCEEEEE
Confidence 999999999887763 78999999999997764433 34588888888753 4568999999999989999999
Q ss_pred eCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEe
Q 014603 190 INPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVT 269 (422)
Q Consensus 190 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~ 269 (422)
++++||||.++ ++++|.++|+++|+++|+|++++. |..+.++...+.| +++.|++|.++ |+ ++|++++
T Consensus 151 ~~~~n~tG~~~---~~~~I~~la~~~g~~vivD~a~~~----g~~~~~~~~~~~D---~~~~s~~K~~g-p~-g~G~l~~ 218 (404)
T PRK14012 151 MHVNNEIGVIQ---DIAAIGEICRERGIIFHVDAAQSV----GKVPIDLSKLKVD---LMSFSAHKIYG-PK-GIGALYV 218 (404)
T ss_pred ECcCCCccchh---hHHHHHHHHHHcCCEEEEEcchhc----CCcccCcccCCCC---EEEEehhhccC-CC-ceEEEEE
Confidence 99999999995 578889999999999999999975 3333334444443 77789999754 33 4899888
Q ss_pred eCCCCcccchhHHHHHHhhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC-C-C-
Q 014603 270 SDPNGILQDSGIVDSIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKK-P-E- 346 (422)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~-~- 346 (422)
++.......+.....-.......++++.....+..++++.. ........++.+++++++.+.|++++++.+... + .
T Consensus 219 ~~~~~~~~~~~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~-~~~~~~~~~~~~~l~~~l~~~L~~~~~i~~~~~~~~~~ 297 (404)
T PRK14012 219 RRKPRVRLEAQMHGGGHERGMRSGTLPTHQIVGMGEAARIA-KEEMATENERIRALRDRLWNGIKDIEEVYLNGDLEQRV 297 (404)
T ss_pred ecCCCCCCCceecCCCccCCccCCCcCHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccC
Confidence 64321100000000000000112344444555555565542 234566778888999999999988877653211 1 1
Q ss_pred -CceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC-------------------CCeEEEEec--cChHHH
Q 014603 347 -GSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL-------------------KDWLRITFA--VEPSAL 404 (422)
Q Consensus 347 -~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~-------------------~~~iRis~~--~~~~~l 404 (422)
....+++.+. +..++...+ +++.|.+|..|.. .+.+|++++ ++++|+
T Consensus 298 ~~~~~~~~~~~--------~~~~~~~~l---~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~~dv 366 (404)
T PRK14012 298 PGNLNVSFNYV--------EGESLIMAL---KDLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEI 366 (404)
T ss_pred CCEEEEEEeCc--------CHHHHHHhC---CCeEEEchhhhCCCCCCCCHHHHHcCCChhhcCceEEEEecCCCCHHHH
Confidence 1223444432 233444433 3677777755532 368999998 789999
Q ss_pred HHHHHHHHHHHHHhc
Q 014603 405 EDGLGRMKAFYDRHA 419 (422)
Q Consensus 405 ~~~~~~l~~~~~~~~ 419 (422)
+++++.|++++++++
T Consensus 367 d~~~~~l~~~~~~~~ 381 (404)
T PRK14012 367 DYAIELVRKSIGKLR 381 (404)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999887753
No 161
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.96 E-value=1.4e-26 Score=218.75 Aligned_cols=320 Identities=21% Similarity=0.265 Sum_probs=236.3
Q ss_pred eeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCC----CCC----CCCCHHHHHHHHHHHhhcCCCCCCC-CCEEEecC
Q 014603 48 IPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNC----YSS----TVGILPARRAIADYLNRDLPYKLSP-DDVYLTLG 118 (422)
Q Consensus 48 i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~----y~~----~~g~~~lr~~ia~~l~~~~~~~~~~-~~i~~~~g 118 (422)
|.|+++.++ +.|+.+.+++.+.+.....+. +.. ...+.+.|+.+++++ +.++ ++|++++|
T Consensus 1 iYld~~~~~-----~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~l------g~~~~~~v~~~~~ 69 (371)
T PF00266_consen 1 IYLDNAGTG-----PMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLL------GAPPDEEVVFTSN 69 (371)
T ss_dssp EEEBTSSS------B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHH------TSSTTEEEEEESS
T ss_pred CEeeCCCcc-----CCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhc------CCccccccccccc
Confidence 456666655 678899999999876432211 111 123457888899999 4566 79999999
Q ss_pred HHHHHHHHHHHh---cCCCCEEEecCCCccchH----HHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeC
Q 014603 119 CTQAIEVILTVL---ARPGANILLPRPGFPYYE----ARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIIN 191 (422)
Q Consensus 119 ~~~a~~~~~~~l---~~~gd~Vl~~~~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~ 191 (422)
+|.+++.++.++ .++|++|++.+..|++.. ...+..|.+++.++.+.. ..+|++.+++.++++++++++++
T Consensus 70 ~t~a~~~~~~~l~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~~--~~~~~~~~~~~l~~~~~lv~~~~ 147 (371)
T PF00266_consen 70 GTEALNAVASSLLNPLKPGDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPADPG--GSLDLEDLEEALNPDTRLVSISH 147 (371)
T ss_dssp HHHHHHHHHHHHHHHGTTTCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEGTT--SSCSHHHHHHHHHTTESEEEEES
T ss_pred cchhhhhhhhccccccccccccccccccccccccccccccccchhhhcccccccc--chhhhhhhhhhhccccceEEeec
Confidence 999999999999 789999999999997654 445577999998887643 35899999999999999999999
Q ss_pred CCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeC
Q 014603 192 PGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD 271 (422)
Q Consensus 192 p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~ 271 (422)
.+|.+|...| +++|.++|+++|+++++|.+++. |....++..++.| ++++|.+|.+|.+| +|+++++
T Consensus 148 ~~~~tG~~~p---i~~I~~~~~~~~~~~~vD~~~~~----g~~~id~~~~~~D---~~~~s~~Kl~gp~G--~g~l~v~- 214 (371)
T PF00266_consen 148 VENSTGVRNP---IEEIAKLAHEYGALLVVDAAQSA----GCVPIDLDELGAD---FLVFSSHKLGGPPG--LGFLYVR- 214 (371)
T ss_dssp BETTTTBBSS---HHHHHHHHHHTTSEEEEE-TTTT----TTSS--TTTTTES---EEEEESTSTTSSST--EEEEEEE-
T ss_pred ccccccEEee---eceehhhhhccCCceeEechhcc----ccccccccccccc---eeeecccccCCCCc--hhhheeh-
Confidence 9999999964 77888899999999999999987 4444556666554 89999999555566 7999887
Q ss_pred CCCcccchhHHHHHHhhhh----------------------hccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHH
Q 014603 272 PNGILQDSGIVDSIKSFLN----------------------ISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADIC 329 (422)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l 329 (422)
++..++++.... ..++++.....++..+++...+..+++..++..++.+++
T Consensus 215 -------~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~ 287 (371)
T PF00266_consen 215 -------PEAIERLRPAKPGGGYLDFPSLQEYGLADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIRERIRELAEYL 287 (371)
T ss_dssp -------HHHHHHHHTSSSSSSTTTHHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -------hhhhhccccccccccccccccchhcccccccccccccceeeehhhhHHHHHhhhhccccccchhhhhhHHHHH
Confidence 455666632110 123677777888888888766778899999999999999
Q ss_pred HHHhhcCCCCCCCC---CCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCC--------CCCeEEEEec
Q 014603 330 CDRLKEIPCITCPK---KPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVG--------LKDWLRITFA 398 (422)
Q Consensus 330 ~~~L~~~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~--------~~~~iRis~~ 398 (422)
.+.|++++++.+.. .+..+..+.+.++.. +..++...|. +.||.+..|..+. ..+.+|+|++
T Consensus 288 ~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~------~~~~~~~~L~-~~~I~~~~G~~~~~~~~~~~~~~~~iRvS~~ 360 (371)
T PF00266_consen 288 REALEELPGIEVLGPDDEPRRPSIVSFNLPGS------DADDVVKYLE-ERGIAVSTGSACAGPSLDILGMGGVIRVSLH 360 (371)
T ss_dssp HHHHHHTTTEEESSSSCGGBGTTEEEEEETTS------SHHHHHHHHH-HHTEEEEESTTTCHHHHHHHHTTTEEEEE-G
T ss_pred HhhhhcCCceeEeeecccccccceEEEeecCC------CHHHHHHHHh-hcCEEEeccCcccHHHHHHhCCCCEEEEecc
Confidence 99999998876432 122234455555432 5666666664 4599999988776 3589999998
Q ss_pred --cChHHHHHH
Q 014603 399 --VEPSALEDG 407 (422)
Q Consensus 399 --~~~~~l~~~ 407 (422)
++++||+++
T Consensus 361 ~~nt~~dv~~l 371 (371)
T PF00266_consen 361 YYNTEEDVDRL 371 (371)
T ss_dssp TTSSHHHHHHH
T ss_pred CCCCHHHHhhC
Confidence 789999875
No 162
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.96 E-value=1.6e-26 Score=218.83 Aligned_cols=319 Identities=19% Similarity=0.167 Sum_probs=223.7
Q ss_pred CCcHHHHHHHHHHhhCCCC--CCCCC-CCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcC----CC
Q 014603 62 RTASVAVDAIVHSVRSARF--NCYSS-TVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLAR----PG 134 (422)
Q Consensus 62 ~~~~~v~~a~~~~~~~~~~--~~y~~-~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~----~g 134 (422)
+++|.+.+++.+++..... ..|+. .....++++.+++++ +.+...+++++|+++++..++.++.. ++
T Consensus 31 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~------g~~~~~~~~~~ggt~a~~~a~~~~~~~~~~~~ 104 (371)
T PRK13520 31 EPHPIARKAHEMFLETNLGDPGLFPGTAKLEEEAVEMLGELL------HLPDAYGYITSGGTEANIQAVRAARNLAKAEK 104 (371)
T ss_pred CchHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHh------CCCCCCeEEecCcHHHHHHHHHHHHhhccCCC
Confidence 4568888999888765311 11211 111235566666666 34556788999999999998877643 57
Q ss_pred CEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHH
Q 014603 135 ANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKK 214 (422)
Q Consensus 135 d~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~ 214 (422)
++|++.+++|..+...++..|.+++.++.+ .++.+|++.|++.++++++.+++++++|+||.+. ++++|.++|++
T Consensus 105 ~~vl~~~~~h~s~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~vi~~~~~~~tG~~~---~l~~I~~l~~~ 179 (371)
T PRK13520 105 PNIVVPESAHFSFDKAADMLGVELRRAPLD--DDYRVDVKAVEDLIDDNTIGIVGIAGTTELGQVD---PIPELSKIALE 179 (371)
T ss_pred ceEEecCcchHHHHHHHHHcCceEEEecCC--CCCcCCHHHHHHHHhhCCEEEEEEcCCcCCcccC---CHHHHHHHHHH
Confidence 899999999999998888899999888864 3456899999999988888888888999999995 48888888999
Q ss_pred cCcEEEEcccccccccC--CCC-CCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhh-
Q 014603 215 LGIMVIADEVYDHLAFG--NTP-FVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN- 290 (422)
Q Consensus 215 ~~~~li~D~~~~~~~~~--~~~-~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~- 290 (422)
+|+++++|++|+.+... ... ...+...+. ..+..|.+|+ +.+|.++|+++..+ +++.+.+.....
T Consensus 180 ~g~~livD~a~~~~~~~~~~~~~~~~~~~~~v---d~~~~s~~K~-~~a~~~~G~~~~~~-------~~~~~~l~~~~~~ 248 (371)
T PRK13520 180 NGIFLHVDAAFGGFVIPFLDDPPNFDFSLPGV---DSITIDPHKM-GLAPIPAGGILFRD-------ESYLDALAVDTPY 248 (371)
T ss_pred cCCCEEEEecchhHHHHhhcCCCCccccCCCC---ceEEECCccc-cCccCCceEEEEcC-------HHHHHhhcccCcc
Confidence 99999999999864321 110 011111121 2555688896 67778899888753 345555432111
Q ss_pred --------hccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccccC
Q 014603 291 --------ISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEG 362 (422)
Q Consensus 291 --------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 362 (422)
..++.+.....++..+|+...+..+++..++..++++.+.+.|+++ ++.+...|. ..++.+.++
T Consensus 249 ~~~~~~~~~~gt~~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~-~~~v~~~~~------ 320 (371)
T PRK13520 249 LTSKKQATLTGTRSGAGVAATYAVMKYLGREGYRKVVERCMENTRWLAEELKER-GFEPVIEPV-LNIVAFDDP------ 320 (371)
T ss_pred ccCCCCcceEeeccChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHHHHHHHHhC-CCEEecCCC-ceEEEEecC------
Confidence 1123344556667777765445667888899999999999999987 765232444 345555554
Q ss_pred CCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHHHHHHHH
Q 014603 363 INSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGRMKAFYD 416 (422)
Q Consensus 363 ~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~l~~~~~ 416 (422)
+..++...| .++||.+.++. ..+++|+|++ +++++++++++.|+++++
T Consensus 321 --~~~~v~~~L-~~~gi~v~~~~---~~~~iRis~~~~~t~edi~~~~~~l~~~~~ 370 (371)
T PRK13520 321 --NPDEVREKL-RERGWRVSVTR---CPEALRIVCMPHVTREHIENFLEDLKEVKK 370 (371)
T ss_pred --CHHHHHHHH-HHCCceeccCC---CCCEEEEEEECCCCHHHHHHHHHHHHHHhh
Confidence 355666666 45599987753 2568999987 789999999999998764
No 163
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.96 E-value=6.1e-27 Score=222.89 Aligned_cols=345 Identities=16% Similarity=0.180 Sum_probs=231.0
Q ss_pred cCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCC--CCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCH
Q 014603 42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARF--NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGC 119 (422)
Q Consensus 42 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~ 119 (422)
.+|..++||..|....+.++. +|++.+|+.+++.+... ..|.. ....++.+.++++. ..+.+++++||
T Consensus 36 ~dG~~~lD~~~g~~~~~lGh~-~p~v~~A~~~~~~~~~~~~~~~~~-~~~~~la~~l~~~~--------~~~~v~~~~sG 105 (406)
T PRK12381 36 QQGKEYIDFAGGIAVNALGHA-HPALREALNEQASKFWHTGNGYTN-EPVLRLAKKLIDAT--------FADRVFFCNSG 105 (406)
T ss_pred CCCCEEEEcCcCHhhccCCCC-CHHHHHHHHHHHhhcccccCccCC-HHHHHHHHHHHhhC--------CCCeEEEcCCc
Confidence 368889999888655445544 89999999999875211 11211 11234555555443 24699999999
Q ss_pred HHHHHHHHHHhc--------CCCCEEEecCCCccchHHHHhhCCCeEEE----eeccCC--CCcccCHHHHHHhhcCCce
Q 014603 120 TQAIEVILTVLA--------RPGANILLPRPGFPYYEARATHSHLEVRH----FDLLPA--KGWEVDLDAVEALADENTV 185 (422)
Q Consensus 120 ~~a~~~~~~~l~--------~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~----~~~~~~--~~~~~d~~~l~~~~~~~~~ 185 (422)
++|++.+++... ....+|+..+.+||+....+...+..... .++.+. .....|++.+++.+++++.
T Consensus 106 seA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~a 185 (406)
T PRK12381 106 AEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLNSASALIDDQTC 185 (406)
T ss_pred HHHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCCCHHHHHHhccCCee
Confidence 999999998752 13478999999999886544433321110 011000 0011378899988876655
Q ss_pred EEEEeCCCCCccccc--CHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCce
Q 014603 186 ALVIINPGNPCGNVY--TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWR 263 (422)
Q Consensus 186 ~i~i~~p~nptG~~~--~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r 263 (422)
+++ .+|.+++|-++ +.+.+++|.++|++||+++|+||+|.++.++|... .....+..++ +.+++|.++ +|+|
T Consensus 186 avi-iEPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~~~-~~~~~~v~pD---i~t~sK~l~-gG~~ 259 (406)
T PRK12381 186 AVI-VEPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGELY-AYMHYGVTPD---VLTTAKALG-GGFP 259 (406)
T ss_pred EEE-EeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcchh-hhHhhCCCCC---EEEehhhhh-CCCc
Confidence 554 57988888643 68999999999999999999999998887777532 2222222222 358899975 7999
Q ss_pred eEEEEeeCCCCcccchhHHHHHHhhh-hhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCC-CCCC
Q 014603 264 LGWLVTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIP-CITC 341 (422)
Q Consensus 264 ~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~ 341 (422)
+||++++ +++++.+.... ..+.+.+++.++++.++|+... -.+..++++++.+++.+.|+++. ....
T Consensus 260 ig~~~~~--------~~~~~~~~~~~~~~t~~~~pl~~aaa~a~l~~l~---~~~~~~~~~~~~~~l~~~L~~l~~~~~~ 328 (406)
T PRK12381 260 IGAMLTT--------EKCASVMTVGTHGTTYGGNPLASAVAGKVLELIN---TPEMLNGVKQRHDWFVERLNTINARYGL 328 (406)
T ss_pred eEEEEEc--------HHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHh---hccHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 9999986 46777775533 3345778899999988887532 23466778888888888887651 1211
Q ss_pred C-CCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHHHHHHHHHh
Q 014603 342 P-KKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 342 ~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~l~~~~~~~ 418 (422)
+ .....|.++++.++.... .....+. ..+.++||.+.+.. .+++|++++ ++++++++++++|+++++++
T Consensus 329 ~~~vrg~Gl~~~~~l~~~~~---~~~~~~~-~~l~~~Gv~v~~~g----~~~lRl~p~~~~t~~~i~~~~~~l~~~l~~~ 400 (406)
T PRK12381 329 FSEIRGLGLLIGCVLNAEYA---GKAKQIS-QEAAKAGVMVLIAG----PNVVRFAPALNISEEEITTGLDRFARACERF 400 (406)
T ss_pred EEEEecCeEEEEEEecCchh---hHHHHHH-HHHHHCCcEEeeCC----CCEEEEeCCccCCHHHHHHHHHHHHHHHHHH
Confidence 1 123447788887754200 0123444 44567799997642 468999987 78999999999999999887
Q ss_pred ccc
Q 014603 419 AKK 421 (422)
Q Consensus 419 ~~~ 421 (422)
.++
T Consensus 401 ~~~ 403 (406)
T PRK12381 401 VSR 403 (406)
T ss_pred Hhc
Confidence 543
No 164
>PLN02651 cysteine desulfurase
Probab=99.96 E-value=8.1e-27 Score=219.66 Aligned_cols=322 Identities=15% Similarity=0.124 Sum_probs=223.3
Q ss_pred eeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCC------C--CCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCH
Q 014603 48 IPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYS------S--TVGILPARRAIADYLNRDLPYKLSPDDVYLTLGC 119 (422)
Q Consensus 48 i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~------~--~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~ 119 (422)
|+|+++.++ ++++.+.+++.+.+.....+... . ..-+.++|+.+++++ +.++++|++++|+
T Consensus 1 iYld~a~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~v~~t~~~ 69 (364)
T PLN02651 1 LYLDMQATT-----PIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALI------GADPKEIIFTSGA 69 (364)
T ss_pred CcccCcCCC-----CCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCCH
Confidence 356666655 67789999998887542211110 1 122557778888887 4567899999999
Q ss_pred HHHHHHHHHHh----cCCCCEEEecCCCccchHHH---HhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCC
Q 014603 120 TQAIEVILTVL----ARPGANILLPRPGFPYYEAR---ATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINP 192 (422)
Q Consensus 120 ~~a~~~~~~~l----~~~gd~Vl~~~~~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p 192 (422)
|++++.++.++ .++||+|++...+|+++... +...|.+++.++.++ ++.+|++.+++.+++++++++++++
T Consensus 70 t~a~~~~l~~~~~~~~~~g~~vl~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~i~~~t~lv~v~~~ 147 (364)
T PLN02651 70 TESNNLAIKGVMHFYKDKKKHVITTQTEHKCVLDSCRHLQQEGFEVTYLPVKS--DGLVDLDELAAAIRPDTALVSVMAV 147 (364)
T ss_pred HHHHHHHHHHHHHhccCCCCEEEEcccccHHHHHHHHHHHhcCCEEEEEccCC--CCcCCHHHHHHhcCCCcEEEEEECC
Confidence 99988887654 46899999999888765332 335688888888753 4568999999999989999999999
Q ss_pred CCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCC
Q 014603 193 GNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDP 272 (422)
Q Consensus 193 ~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~ 272 (422)
+|+||.+. ++++|.++|+++|+++++|.+++. |..+.++..++.| +++.|.+|+++.+| +|+++++++
T Consensus 148 ~n~tG~~~---~l~~I~~~~~~~g~~~~vD~a~~~----g~~~~~~~~~~~D---~~~~s~hK~~gp~G--~g~l~v~~~ 215 (364)
T PLN02651 148 NNEIGVIQ---PVEEIGELCREKKVLFHTDAAQAV----GKIPVDVDDLGVD---LMSISGHKIYGPKG--VGALYVRRR 215 (364)
T ss_pred CCCceecc---cHHHHHHHHHHcCCEEEEEcchhh----CCcccCcccCCCC---EEEechhhhCCCCc--eEEEEEcCC
Confidence 99999995 577888999999999999999986 4334455555554 88899999744445 888888753
Q ss_pred CCcccchhHHHHHHhhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCCCCC---CC-
Q 014603 273 NGILQDSGIVDSIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKE-IPCITCPKKP---EG- 347 (422)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~---~~- 347 (422)
....-.+.+...-.......++++.....++.++|+...+ ..+...++.+++++++.+.|++ +|++.+. .| ..
T Consensus 216 ~~~~l~p~~~g~~~~~~~~~GT~~~~~~~~l~~al~~~~~-~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~-~~~~~~~~ 293 (364)
T PLN02651 216 PRVRLEPLMSGGGQERGRRSGTENTPLVVGLGAACELAMK-EMDYDEKHMKALRERLLNGLRAKLGGVRVN-GPRDPEKR 293 (364)
T ss_pred CCCCCCccccCCCccCCccCCCccHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHhhCCCEEEE-CCCCcccC
Confidence 2111001110000001123457888888888888876443 3477888999999999999985 6777744 33 11
Q ss_pred -ceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC-------------------CCeEEEEec--cChHHHH
Q 014603 348 -SMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL-------------------KDWLRITFA--VEPSALE 405 (422)
Q Consensus 348 -g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~-------------------~~~iRis~~--~~~~~l~ 405 (422)
...+.+.++.. +..++...| .+ |.+..|..|.. .+.+|+|++ ++++||+
T Consensus 294 ~~~i~~~~~~~~------~~~~~~~~L-~~--i~v~~g~~c~~~~~~~~~~~~~~g~~~~~~~~~vR~S~~~~~t~~did 364 (364)
T PLN02651 294 YPGTLNLSFAYV------EGESLLMGL-KE--VAVSSGSACTSASLEPSYVLRALGVPEEMAHGSLRLGVGRFTTEEEVD 364 (364)
T ss_pred cCCEEEEEeCCC------CHHHHHHHh-CC--EEEEchhhcCCCCCCcCHHHHHcCCChHHhCceEEEEcCCCCCHHHcC
Confidence 22444445421 566676666 43 99998887633 268999998 7888874
No 165
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.96 E-value=1.5e-26 Score=218.02 Aligned_cols=317 Identities=15% Similarity=0.128 Sum_probs=224.4
Q ss_pred CCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCC--CCEEEecCHHHHHHHHHHHhcCCCCEEEe
Q 014603 62 RTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSP--DDVYLTLGCTQAIEVILTVLARPGANILL 139 (422)
Q Consensus 62 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~--~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~ 139 (422)
..++.|.+++...... ....+ ..-+.++|+.++++++ .++ +.|++|+|+|++++.++.++..+||.+++
T Consensus 13 ~~~~~v~~~~~~~~~~-~~~~~--~~~~~~~r~~la~l~~------~~~~~~~i~~t~~~t~al~~~~~~l~~~~~~vlv 83 (363)
T TIGR02326 13 TTSRTVKEAMLFDWCT-WDSDY--NIVVEQIRQQLLALAT------AEEGYTSVLLQGSGTFAVEAVIGSAVPKDGKLLV 83 (363)
T ss_pred CCCHHHHHHhCCCCCC-CChHH--HHHHHHHHHHHHHHhC------CCCCceEEEEcCCCHHHHHHHHHhcCCCCCeEEE
Confidence 4567888777665521 11011 1235677888888873 444 47999999999999999999888888777
Q ss_pred cCCCccch--HHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC--CceEEEEeCCCCCcccccCHHHHHHHHHHHHHc
Q 014603 140 PRPGFPYY--EARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE--NTVALVIINPGNPCGNVYTYQHLQKIAETAKKL 215 (422)
Q Consensus 140 ~~~~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~--~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~ 215 (422)
..+.+++. ...++..|.+++.++.++ ++.+|++.+++.+++ +++++.+++++||||..+| +++|.++|+++
T Consensus 84 ~~~~~~~~~~~~~a~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~---i~~I~~l~~~~ 158 (363)
T TIGR02326 84 VINGAYGARIVQIAEYLGIPHHVVDTGE--VEPPDVVEVEAILAADPAITHIALVHCETTTGILNP---IEAVAKLAHRH 158 (363)
T ss_pred EeCChhhHHHHHHHHHcCCceEEEeCCC--CCCCCHHHHHHHHhhCCCccEEEEEeecCCccccCc---HHHHHHHHHHc
Confidence 66666544 466778899999888643 456899999998864 4567788899999999965 68899999999
Q ss_pred CcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCcccc-CCCCceeEEEEeeCCCCcccchhHHHHHHhh------
Q 014603 216 GIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRW-IVPGWRLGWLVTSDPNGILQDSGIVDSIKSF------ 288 (422)
Q Consensus 216 ~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~-~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~------ 288 (422)
|+++|+|++++. |..+.++..++.+ ++++|++|++ +.+| +|++++++ +.++++...
T Consensus 159 g~~livD~~~~~----g~~~~~~~~~~~D---~~~~s~~K~l~~p~G--~G~l~~~~--------~~~~~~~~~~~~~~~ 221 (363)
T TIGR02326 159 GKVTIVDAMSSF----GGIPIDIAELHID---YLISSANKCIQGVPG--FGFVIARQ--------AELAACKGNARSLSL 221 (363)
T ss_pred CCEEEEEccccc----cCcccchhhcCcc---EEEecCccccccCCc--ceEEEECH--------HHHHHhhcCCCceee
Confidence 999999998874 3333445555443 8889999986 3456 79999863 344433210
Q ss_pred -------------hhhccCcchHHHHHHHHHHhhchHH-HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC--CCceEEE
Q 014603 289 -------------LNISSDPATFIQGAVPQILEKTEEE-FFSKITDILRETADICCDRLKEIPCITCPKKP--EGSMFVM 352 (422)
Q Consensus 289 -------------~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~--~~g~~~~ 352 (422)
....++++...+.++.++++...+. .++++.++++++++++++.|+++ ++.+...+ ..+...+
T Consensus 222 ~~~~~~~~~~~~~~~~~ft~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~ 300 (363)
T TIGR02326 222 DLYDQWRCMEDNHGKWRFTSPTHVVHAFAQALLELEKEGGVAARHQRYQQNQKTLVAGMRAL-GFEPLLDDEIQSPIITS 300 (363)
T ss_pred cHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc-CCeeccCcccCCceEEE
Confidence 0012356777888888888764333 47788899999999999999887 66533222 3344566
Q ss_pred EecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEe-c-cChHHHHHHHHHHHHHH
Q 014603 353 VKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITF-A-VEPSALEDGLGRMKAFY 415 (422)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~-~-~~~~~l~~~~~~l~~~~ 415 (422)
+.++... ..+..++...+ +++||.+.+|..+. .+++||++ + ++.+++++++++|++++
T Consensus 301 ~~~~~~~---~~~~~~v~~~L-~~~gi~v~~g~~~~-~~~iRi~~~~~~~~edv~~~l~~l~~~l 360 (363)
T TIGR02326 301 FYSPEDP---DYRFADFYQRL-KEQGFVIYPGKVSQ-VDCFRIGNIGEVDAADITRLLTAIGKAM 360 (363)
T ss_pred EECCCCC---CCCHHHHHHHH-HHCCEEEECCcCCC-CCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 7665310 01345565655 56799999987653 57899996 4 68999999999998875
No 166
>PRK07049 methionine gamma-lyase; Validated
Probab=99.96 E-value=2.5e-26 Score=218.35 Aligned_cols=229 Identities=15% Similarity=0.170 Sum_probs=175.4
Q ss_pred CCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHH----hhCCC
Q 014603 81 NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARA----THSHL 156 (422)
Q Consensus 81 ~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~----~~~g~ 156 (422)
.+|+. .....|++++|++. ..+++++++||++|+..++.+++++||+|+++.|+|.++...+ ...|+
T Consensus 78 ~R~~~-Pt~~~Le~~lA~le--------g~~~~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi 148 (427)
T PRK07049 78 SRFNH-PNSEIVEDRLAVYE--------GAESAALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLLAKTFRNFGV 148 (427)
T ss_pred cCCCC-cCHHHHHHHHHHHh--------CCCcEEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHhcCc
Confidence 45554 34689999999988 2457889999999999999999999999999999999886653 45687
Q ss_pred eEEEeeccCCCCcccCHHHHHHhhc-----CCceEEEEeCCCCCcccccCHHHHHHHHHHHHH---cCcEEEEccccccc
Q 014603 157 EVRHFDLLPAKGWEVDLDAVEALAD-----ENTVALVIINPGNPCGNVYTYQHLQKIAETAKK---LGIMVIADEVYDHL 228 (422)
Q Consensus 157 ~~~~~~~~~~~~~~~d~~~l~~~~~-----~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~---~~~~li~D~~~~~~ 228 (422)
+++.++. ..|.+.+++.+. ++++++++++|+||||.+++.+++.+|++.|+. +++++|+|++|...
T Consensus 149 ~~v~~~~------~~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~~ 222 (427)
T PRK07049 149 GAVGFAD------GLSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLGP 222 (427)
T ss_pred EEEEEeC------CCCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCcccc
Confidence 7665541 146667766553 478999999999999999999999999988654 68999999998643
Q ss_pred ccCCCCCCCccccCCCCCeEEEecCccccC-CCCceeEEEEeeCCCCcccchhHHHHHHhhhhh-ccCcchHHHHHHHHH
Q 014603 229 AFGNTPFVPMGVFGSIVPVLTLGSISKRWI-VPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQGAVPQI 306 (422)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~-~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~ 306 (422)
.+ ..++ ..+ ..+++.|+||.++ .+|+|+||++++ +++.+.+...... ..+.+++.++++...
T Consensus 223 ~~----~~pl-~~g---~divv~S~SK~~gG~~glr~G~vv~~--------~~l~~~l~~~~~~~g~~ls~~~a~l~~r~ 286 (427)
T PRK07049 223 VF----QKPL-EHG---ADLSVYSLTKYVGGHSDLVAGAVLGR--------KALIRQVRALRSAIGTQLDPHSCWMLGRS 286 (427)
T ss_pred cc----CCcc-ccC---CCEEEEcCceeecCCCCcEEEEEECC--------HHHHHHHHHHHHhcCCCCCHHHHHHHHcC
Confidence 21 1122 122 2488899999998 499999999975 4677777765543 346778888888777
Q ss_pred HhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 014603 307 LEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKP 345 (422)
Q Consensus 307 l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 345 (422)
|+. +..+.++..++++.+.+.|+++|++.-+.+|
T Consensus 287 L~t-----l~~R~~~~~~~a~~la~~L~~~p~V~~v~yp 320 (427)
T PRK07049 287 LET-----LVLRMERANRNARAVAEFLRDHPKVEKLHYL 320 (427)
T ss_pred CCh-----HHHHHHHHHHHHHHHHHHHHhCCCccEEECC
Confidence 764 5666677789999999999998876544444
No 167
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.96 E-value=2.2e-26 Score=217.43 Aligned_cols=324 Identities=16% Similarity=0.148 Sum_probs=226.5
Q ss_pred CCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEec
Q 014603 61 FRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLP 140 (422)
Q Consensus 61 ~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~ 140 (422)
.++++.++++|.+.+ ......|. ..+.++|+.++++++. .-+.+.+++++|++++++.++.++..+||.|++.
T Consensus 14 ~~~~~~~~~a~~~~~-~~~~~~~~--~~~~~~~~~l~~l~~~----~~~~~~i~~~~~gt~~l~~~~~~l~~~~~~vlv~ 86 (368)
T PRK13479 14 LTTSRTVREAMLRDW-GSWDDDFN--ALTASVRAKLVAIATG----EEGYTCVPLQGSGTFSVEAAIGSLVPRDGKVLVP 86 (368)
T ss_pred CCCCHHHHHHhCCCC-CCCChHHH--HHHHHHHHHHHHHhCC----CCCceEEEEcCCcHHHHHHHHHhccCCCCeEEEE
Confidence 356788888887765 21111233 2467888888888832 1123568899999999999999999999999998
Q ss_pred CCCccch--HHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC--CceEEEEeCCCCCcccccCHHHHHHHHHHHHHcC
Q 014603 141 RPGFPYY--EARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE--NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLG 216 (422)
Q Consensus 141 ~~~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~--~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~ 216 (422)
.+++++. ...++..|.+++.++... ++.+|++.+++.+++ +++++++++|+||||...| +++|.++|+++|
T Consensus 87 ~~~~~~~~~~~~~~~~g~~~~~i~~~~--~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~---~~~i~~l~~~~~ 161 (368)
T PRK13479 87 DNGAYGARIAQIAEYLGIAHVVLDTGE--DEPPDAAEVEAALAADPRITHVALVHCETTTGILNP---LDEIAAVAKRHG 161 (368)
T ss_pred eCCchHHHHHHHHHHcCCcEEEEECCC--CCCCCHHHHHHHHHhCCCCcEEEEEcccCccccccC---HHHHHHHHHHcC
Confidence 8888665 377788899999998753 346899999998754 4567889999999999965 678888899999
Q ss_pred cEEEEcccccccccCCCCCCCccccCCCCCeEEEecCcccc-CCCCceeEEEEeeCCCCcccchhHHHHHHhhh------
Q 014603 217 IMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRW-IVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL------ 289 (422)
Q Consensus 217 ~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~-~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~------ 289 (422)
+++|+|++++. |....++...+.+ +++.|++|++ +.+| +||++++ +++++.+....
T Consensus 162 ~~livDa~~~~----g~~~~~~~~~~~d---~~v~s~~K~l~g~~G--~G~l~~~--------~~~~~~~~~~~~~~~~~ 224 (368)
T PRK13479 162 KRLIVDAMSSF----GAIPIDIAELGID---ALISSANKCIEGVPG--FGFVIAR--------RSELEACKGNSRSLSLD 224 (368)
T ss_pred CEEEEEccccc----CCccccccccCce---EEEecCccccccCCC--ceEEEEC--------HHHHHHhhcCCCCeeec
Confidence 99999977654 2222344444433 7778999975 5577 6999986 34555543321
Q ss_pred ------------hhccCcchHHHHHHHHHHhhch-HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC--CCceEEEEe
Q 014603 290 ------------NISSDPATFIQGAVPQILEKTE-EEFFSKITDILRETADICCDRLKEIPCITCPKKP--EGSMFVMVK 354 (422)
Q Consensus 290 ------------~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~--~~g~~~~~~ 354 (422)
...++++...+.++.++++... +.++++..+++.++++.+++.|+++ ++.++..+ .......+.
T Consensus 225 ~~~~~~~~~~~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~ 303 (368)
T PRK13479 225 LYDQWAYMEKTGQWRFTPPTHVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRAL-GFEPLLDAEIQSPIIVTFH 303 (368)
T ss_pred HHHHHhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc-CCcccCCchhcCceEEEEE
Confidence 1112566667777777776543 3457888899999999999999998 66633221 111122223
Q ss_pred cCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEe-c-cChHHHHHHHHHHHHHHHHhc
Q 014603 355 LNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITF-A-VEPSALEDGLGRMKAFYDRHA 419 (422)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~-~-~~~~~l~~~~~~l~~~~~~~~ 419 (422)
++.. ++ .+..++...+ .++||.+.+|..+ ..+++|++. + +++++++++++.|+++++++.
T Consensus 304 ~~~~--~~-~~~~~l~~~L-~~~gi~v~~g~~~-~~~~iRis~~~~~t~edi~~~l~~L~~~l~~~~ 365 (368)
T PRK13479 304 APAD--PA-YDFKEFYERL-KEQGFVIYPGKLT-QVDTFRIGCIGDVDAADIRRLVAAIAEALYWMG 365 (368)
T ss_pred CCCC--CC-cCHHHHHHHH-HHCCEEEecCCCC-CCCEEEEecCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 3321 00 1456666666 5569999988644 256899986 4 689999999999999987753
No 168
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.96 E-value=3.9e-26 Score=209.36 Aligned_cols=329 Identities=20% Similarity=0.199 Sum_probs=246.5
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCC------CCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEe
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARF------NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLT 116 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~------~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~ 116 (422)
+++.++||++++ |.++..+|.+++++.+.++.... .-++....+.+|++.+|+|+ ..+..++.
T Consensus 37 ~~~~~~nf~SNd---YLGLa~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~--------g~e~al~f 105 (388)
T COG0156 37 DGRKVLNFCSND---YLGLASHPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFL--------GAEAALLF 105 (388)
T ss_pred CCceeEeeeccC---cccccCCHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHh--------CCCcEEEE
Confidence 468899999999 77888899999999999876211 12334455789999999999 34577777
Q ss_pred cCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC---C---ceEEEEe
Q 014603 117 LGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE---N---TVALVII 190 (422)
Q Consensus 117 ~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~---~---~~~i~i~ 190 (422)
+++-.|+..++.++++++|.|+.....|.+....++..+.+.+.+.. .|++.||+.+.+ . .+.++..
T Consensus 106 ~SGy~AN~~~i~~l~~~~dli~~D~lnHASiidG~rls~a~~~~f~H-------nD~~~Le~~l~~~~~~~~~~~~Ivte 178 (388)
T COG0156 106 SSGFVANLGLLSALLKKGDLIFSDELNHASIIDGIRLSRAEVRRFKH-------NDLDHLEALLEEARENGARRKLIVTE 178 (388)
T ss_pred cccchhHHHHHHHhcCCCcEEEEechhhhhHHHHHHhCCCcEEEecC-------CCHHHHHHHHHhhhccCCCceEEEEe
Confidence 88888999999999999999999999999999999999999988864 377888888755 1 3444444
Q ss_pred CCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCC--CCCeEEEecCccccCCCCceeEEEE
Q 014603 191 NPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS--IVPVLTLGSISKRWIVPGWRLGWLV 268 (422)
Q Consensus 191 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~--~~~~i~i~s~sK~~~~~G~r~G~~~ 268 (422)
..-...|.+ .++.+|++++++|+.++++||+|+...++..+....+.++. .+..|+++||+|.||..| |++.
T Consensus 179 gVfSMdGdi---ApL~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlGs~G---g~v~ 252 (388)
T COG0156 179 GVFSMDGDI---APLPELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALGSSG---GYIA 252 (388)
T ss_pred ccccCCCCc---CCHHHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhhcccC---ceee
Confidence 556778988 56888899999999999999999988776554444444433 334699999999999888 9998
Q ss_pred eeCCCCcccchhHHHHHHhhhh---hccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 014603 269 TSDPNGILQDSGIVDSIKSFLN---ISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKP 345 (422)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 345 (422)
++ ..+.+.+..... ++.+.++...+++.++|+.. ......+++++++...++..++.. ++. . .+
T Consensus 253 g~--------~~~~d~L~~~ar~~ifStalpP~~aaa~~~al~~l--~~~~~~r~~L~~~~~~~~~~~~~~-~~~-~-~~ 319 (388)
T COG0156 253 GS--------AALIDYLRNRARPFIFSTALPPAVAAAALAALRIL--EEGPERRERLQELAAFFRSLLKAL-GLV-L-LP 319 (388)
T ss_pred Cc--------HHHHHHHHHhCCceeccCCCCHHHHHHHHHHHHHH--HhCHHHHHHHHHHHHHHHHHHHhc-CCc-c-CC
Confidence 86 467777766532 23355666666777777652 234567778888888888666665 444 2 35
Q ss_pred CCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCC---CeEEEEec--cChHHHHHHHHHHHHH
Q 014603 346 EGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLK---DWLRITFA--VEPSALEDGLGRMKAF 414 (422)
Q Consensus 346 ~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~---~~iRis~~--~~~~~l~~~~~~l~~~ 414 (422)
....+..+.+.... .+.++...++++ ||.+.+..++..+ ..+|++++ +++++|+.+++.+.++
T Consensus 320 s~s~I~pv~~gd~~-----~a~~~s~~l~~~-Gi~v~~i~~PTVp~gtarlRi~lta~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 320 SESPIIPVILGDEE-----RALEASRALLEE-GIYVSAIRPPTVPKGTARLRITLTAAHTEEDIDRLAEALSEV 387 (388)
T ss_pred CCCCeeeeEeCCHH-----HHHHHHHHHHHC-CeeEeeecCCCCCCCcceEEEEecCCCCHHHHHHHHHHHHhh
Confidence 55556655554321 355666667666 9999998877663 67999998 8999999999988764
No 169
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.96 E-value=2.2e-26 Score=206.61 Aligned_cols=340 Identities=19% Similarity=0.243 Sum_probs=234.7
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCC--CCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSAR--FNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT 120 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~ 120 (422)
+|+.+|||..|...... -+.+|.+.+++.+|.+.-. .+.| ..+.+..+++.|.+.. + ..+.++|++||+
T Consensus 40 ~G~~YlDf~~Giav~~l-GH~hP~iv~al~~Q~~kl~h~sn~~-----~~~~~~~la~~L~~~s--~-~~d~vff~NSGa 110 (404)
T COG4992 40 QGREYLDFAAGIAVNNL-GHCHPALVEALKEQAEKLWHVSNLF-----YNEPQAELAEKLVELS--P-FADRVFFCNSGA 110 (404)
T ss_pred CCCEeeeeccceeeecc-CCCCHHHHHHHHHHHHHhhhccccc-----CChHHHHHHHHHHhhC--c-cccEEEEcCCcH
Confidence 69999999998766433 3578999999999987632 2222 2345556666665422 2 378999999999
Q ss_pred HHHHHHHHHhcC----C-CCEEEecCCCccchHHHHhhCCCeEEEe----eccCCC---CcccCHHHHHHhhcCCceEEE
Q 014603 121 QAIEVILTVLAR----P-GANILLPRPGFPYYEARATHSHLEVRHF----DLLPAK---GWEVDLDAVEALADENTVALV 188 (422)
Q Consensus 121 ~a~~~~~~~l~~----~-gd~Vl~~~~~~~~~~~~~~~~g~~~~~~----~~~~~~---~~~~d~~~l~~~~~~~~~~i~ 188 (422)
||+++++....+ + ..+|+.....||+-...+...+.+..+. |+.+.- .|+ |++.+++++++++.+++
T Consensus 111 EA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpfn-Di~al~~ai~~~taAvi 189 (404)
T COG4992 111 EANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPFN-DIEALEAAIDEDTAAVI 189 (404)
T ss_pred HHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCCC-CHHHHHHHhccCeEEEE
Confidence 999999876532 2 2489999999987544443333332111 221110 111 88999999999887777
Q ss_pred EeCCCCCcccc-cCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEE
Q 014603 189 IINPGNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWL 267 (422)
Q Consensus 189 i~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~ 267 (422)
+...+-..|++ .+.+.++++.++|++||+++|.||+|.++.++|+.+ .....+..++++++ .|.+ +.|+++|.+
T Consensus 190 vEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk~f-A~e~~gV~PDI~tl---aK~L-gGG~PigA~ 264 (404)
T COG4992 190 VEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGKLF-AYEHYGVEPDILTL---AKAL-GGGFPIGAM 264 (404)
T ss_pred EecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccchHH-HHHHhCCCCCEEEe---eccc-cCCccceee
Confidence 66668888886 466679999999999999999999999999988643 33344444444444 6995 667999999
Q ss_pred EeeCCCCcccchhHHHHHHhhh-hhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhc----CCCCCCC
Q 014603 268 VTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKE----IPCITCP 342 (422)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~ 342 (422)
++.+ .+.+.+.... ..+++.|+++++++.++|+...+ +...++.++.-++|.+.|++ .|-+.
T Consensus 265 la~~--------~~~~~~~~G~HgSTfGGNpLacAv~~a~l~~l~~---e~ll~~v~~~g~~~~~~L~~l~~~~~~v~-- 331 (404)
T COG4992 265 LATE--------EIASAFTPGDHGSTFGGNPLACAVALAVLEVLLE---EGLLENVREKGEYLLQRLRELKRRYPLVK-- 331 (404)
T ss_pred EEch--------hhhhcCCCCcccCCCCcCHHHHHHHHHHHHHHcc---hhHHHHHHHHHHHHHHHHHHHhhcCCcee--
Confidence 9852 3444454443 34568899999999999987442 22333444555555555554 33222
Q ss_pred CCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHHHHHHHHHhcc
Q 014603 343 KKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGRMKAFYDRHAK 420 (422)
Q Consensus 343 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~l~~~~~~~~~ 420 (422)
....-|+++.+.+.... ...+++..+ .++|+++.+.. .+.+|+.+. ++++++++++++|++++.....
T Consensus 332 ~vRG~GLmiGiel~~~~-----~a~~~~~~~-~~~gvL~~~a~----~~ViR~~PpL~i~~eei~~~~~~l~~~l~~~~~ 401 (404)
T COG4992 332 EVRGRGLMIGIELKEPY-----RARDIVRAL-REEGVLVLPAG----PNVIRFLPPLVITEEEIDEALDALERALAAASA 401 (404)
T ss_pred eeecceeEEEEEecCcc-----cHHHHHHHH-HHCCeEEecCC----CCeEEecCCccCCHHHHHHHHHHHHHHHHHhhh
Confidence 23344788888886421 256666665 66799998765 579999998 7999999999999999987654
No 170
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.96 E-value=1.9e-26 Score=221.40 Aligned_cols=344 Identities=13% Similarity=0.121 Sum_probs=227.8
Q ss_pred cCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCC-CCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHH
Q 014603 42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYS-STVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT 120 (422)
Q Consensus 42 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~-~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~ 120 (422)
.+|+.++||..|......+ ..+|.+.+++.+++.+.. .|. +..+..++++++++++. ..+++++++||+
T Consensus 45 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~q~~~~~--~~~~~~~~~~~lae~l~~~~~-------~~~~v~~~~sGs 114 (423)
T TIGR00713 45 VDGNEYIDYVLSWGPLILG-HAHPRVVEAVKEALERGT--SYGAPTEAEILLAKEIISRVP-------SVEMVRFVNSGT 114 (423)
T ss_pred CCCCEEEEccccccccccC-CCCHHHHHHHHHHHHhCC--cCCCCCHHHHHHHHHHHHhCC-------cccEEEEeCCHH
Confidence 3699999999997664222 467999999999998743 333 45567899999998873 136899999999
Q ss_pred HHHHHHHHHhc--CCCCEEEecCCCccchHHHHhh-C--CCeEEEeeccCC-------CCc---ccCHHHHHHhhc---C
Q 014603 121 QAIEVILTVLA--RPGANILLPRPGFPYYEARATH-S--HLEVRHFDLLPA-------KGW---EVDLDAVEALAD---E 182 (422)
Q Consensus 121 ~a~~~~~~~l~--~~gd~Vl~~~~~~~~~~~~~~~-~--g~~~~~~~~~~~-------~~~---~~d~~~l~~~~~---~ 182 (422)
+|++.+++... ...++|++.+++|+++...+.. . +......+..+. ... ..|++.+++.+. +
T Consensus 115 eA~e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~ 194 (423)
T TIGR00713 115 EATMSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPYNDLEALEEVFEEYGE 194 (423)
T ss_pred HHHHHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEeCCCCHHHHHHHHHHcCC
Confidence 99999888642 2448999999999997543332 1 111111111000 000 027888988875 3
Q ss_pred CceEEEEe-CCCCCcccccC-HHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCC
Q 014603 183 NTVALVII-NPGNPCGNVYT-YQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVP 260 (422)
Q Consensus 183 ~~~~i~i~-~p~nptG~~~~-~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~ 260 (422)
++.++++. .++| +|.+++ .+.+++|.++|++||+++|+||+|.++.+ |... ....++..++ +.+|||.++ +
T Consensus 195 ~~aavi~ep~~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~-g~~~-~~~~~~~~pD---i~t~sK~l~-~ 267 (423)
T TIGR00713 195 EIAGVIVEPVAGN-MGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRV-ALGG-AQEYFGVEPD---LTTLGKIIG-G 267 (423)
T ss_pred cEEEEEEeCCCCC-CCCcCCCHHHHHHHHHHHHHhCCEEEEEcccccccc-Ccch-hHHHhCCCcc---hhhhhhhhc-C
Confidence 55666654 5567 788776 68899999999999999999999988743 3221 1112222222 347899986 8
Q ss_pred CceeEEEEeeCCCCcccchhHHHHHHhh----hhhccCcchHHHHHHHHHHhhch-HHHHHHHHHHHHHHHHHHHHHhhc
Q 014603 261 GWRLGWLVTSDPNGILQDSGIVDSIKSF----LNISSDPATFIQGAVPQILEKTE-EEFFSKITDILRETADICCDRLKE 335 (422)
Q Consensus 261 G~r~G~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~L~~ 335 (422)
|+|+||++++ +++++.+... ...+.+.+++.++++.++|+... +..+++..+..+.+++.+.+.+++
T Consensus 268 G~pig~v~~~--------~~i~~~~~~~~~~~~~~T~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 339 (423)
T TIGR00713 268 GLPVGAFGGR--------REIMERLAPEGPVYQAGTLSGNPLAMAAGLATLKLLDEEGVYTELDELAKRLAEGLSEVLED 339 (423)
T ss_pred CCceeeeeEH--------HHHHHhhCcCCCeeeccCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999996 4677777532 12344778999999999988643 235666667777777777777777
Q ss_pred CCCCCCCCCCCCceEEEEecCccccc-----CCCCH---HHHHHHHHHhcCeEEecCCCCCCCCeEEEEeccChHHHHHH
Q 014603 336 IPCITCPKKPEGSMFVMVKLNYSLLE-----GINSD---MEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALEDG 407 (422)
Q Consensus 336 ~~~~~~~~~~~~g~~~~~~~~~~~~~-----~~~~~---~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~l~~~ 407 (422)
+ ++....... |.++.+.+...... ...+. ..+...++ ++||.+.++. + +.+|+++..++++++++
T Consensus 340 ~-~~~~~v~~~-g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~-~---~~~~l~~~~t~~~i~~~ 412 (423)
T TIGR00713 340 T-GIPHTVNRV-GSMFSLFFTEEEVTNYADAKKSDTELFAKFFHEML-DKGVFLPPSQ-F---EACFLSAAHTEEDIENT 412 (423)
T ss_pred c-CCCeEEEee-ccEEEEEEecCCCCChhhhhcccHHHHHHHHHHHH-HCCeEEecCC-c---cceeeECCCCHHHHHHH
Confidence 6 333111223 44444444321000 00011 23455554 5799987642 2 45899988899999999
Q ss_pred HHHHHHHHHH
Q 014603 408 LGRMKAFYDR 417 (422)
Q Consensus 408 ~~~l~~~~~~ 417 (422)
+++|.+++++
T Consensus 413 ~~~l~~~l~~ 422 (423)
T TIGR00713 413 IEAAEEVFAE 422 (423)
T ss_pred HHHHHHHHhh
Confidence 9999999865
No 171
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.96 E-value=1.8e-26 Score=203.69 Aligned_cols=311 Identities=21% Similarity=0.282 Sum_probs=199.7
Q ss_pred CCCC-CCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHH-HHHHH-HHh----cC--------CCCEEEecCCCc
Q 014603 80 FNCY-SSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA-IEVIL-TVL----AR--------PGANILLPRPGF 144 (422)
Q Consensus 80 ~~~y-~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a-~~~~~-~~l----~~--------~gd~Vl~~~~~~ 144 (422)
...| +...|++|+|+..+++| ++++++|++..+++-. +.-++ +++ .. +.-+.|++.|+|
T Consensus 61 ~RNY~G~l~Gipe~r~l~a~ll------gv~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGY 134 (425)
T PF12897_consen 61 CRNYPGGLDGIPEARELFAELL------GVPPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGY 134 (425)
T ss_dssp TTSS-S-SS--HHHHHHHHHHH------TS-GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--
T ss_pred ccCCCCccCChHHHHHHHHHHh------CCCHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCc
Confidence 4589 78899999999999999 7899999987655433 33222 222 11 124789999999
Q ss_pred cchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhc--CCceEEEEeCC--CCCcccccCHHHHHHHHHH-HHHcCcEE
Q 014603 145 PYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALAD--ENTVALVIINP--GNPCGNVYTYQHLQKIAET-AKKLGIMV 219 (422)
Q Consensus 145 ~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~--~~~~~i~i~~p--~nptG~~~~~~~l~~i~~~-~~~~~~~l 219 (422)
.....+.+.+|++.+.+|..++ ++|++.+++++. +..|.+ .|.| +||||.+++.+.+++++++ ....+..|
T Consensus 135 DRHFai~E~~Giemi~VpM~~d---GPDmD~Ve~LV~~D~svKGi-WcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI 210 (425)
T PF12897_consen 135 DRHFAITEHFGIEMIPVPMTED---GPDMDMVEELVAEDPSVKGI-WCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRI 210 (425)
T ss_dssp HHHHHHHHHCT-EEEEEEEETT---EE-HHHHHHHTHTSTTEEEE-EE-SSS-TTT-----HHHHHHHHHS--SSTT-EE
T ss_pred hHHHHHHHhhCcEEEecCCCCC---CCCHHHHHHHHhcCCccceE-EeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEE
Confidence 9999999999999999998653 589999999873 344444 5667 8999999999999999987 33569999
Q ss_pred EEcccccccccCCCCC-CC---c----cccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhh-h
Q 014603 220 IADEVYDHLAFGNTPF-VP---M----GVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL-N 290 (422)
Q Consensus 220 i~D~~~~~~~~~~~~~-~~---~----~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~ 290 (422)
+.|.+|....+.+... .. + ..-+..++++.+.|+||. ..||.+++++.++ ++-++.+++.. .
T Consensus 211 ~WDNAY~vHhL~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKI-Tf~GaGva~~aaS--------~~Nl~~~~~~~~~ 281 (425)
T PF12897_consen 211 FWDNAYAVHHLYDEEPRDALLNILDACAKAGNPDRVYVFASTSKI-TFPGAGVAFFAAS--------EANLAWIKKHLSV 281 (425)
T ss_dssp EEE-TTTT-BSSSSSS------HHHHHHHTT-TTSEEEEEESTTT-S-TTSS-EEEEE---------HHHHHHHHHHHHH
T ss_pred EeecCceEeeccccccchhhhHHHHHHHHcCCCCeEEEEeccccc-ccCCcceeeeecC--------HHHHHHHHHHhcC
Confidence 9999999766633211 11 1 112445679999999999 7999999999987 34556665554 3
Q ss_pred hccCcchHHHHHHHHHHhhch---HHHHHHHHHHHHHHHHHHHHHhhc-CC---CCCCCCCCCCceEEEEecCcccccCC
Q 014603 291 ISSDPATFIQGAVPQILEKTE---EEFFSKITDILRETADICCDRLKE-IP---CITCPKKPEGSMFVMVKLNYSLLEGI 363 (422)
Q Consensus 291 ~~~~~~~~~~~a~~~~l~~~~---~~~~~~~~~~~~~~~~~l~~~L~~-~~---~~~~~~~~~~g~~~~~~~~~~~~~~~ 363 (422)
.+.++.-+.|..-..++.+.. ..+++++.+.++-+.+.+.+.|++ +. ++..|..|.+|+|+++....+
T Consensus 282 ~tIgpdKvNQLRHvrff~d~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~GGYFIsld~~~G----- 356 (425)
T PF12897_consen 282 QTIGPDKVNQLRHVRFFKDAEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTKPKGGYFISLDVLDG----- 356 (425)
T ss_dssp H-S---HHHHHHHHHHHHSHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE---SBSS-EEEEESTT-----
T ss_pred ceeCccHHHHHHHHHHhcChhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCCCceEEEEecCCC-----
Confidence 456889999999999998733 567788888888888877777765 32 344477999999999988764
Q ss_pred CCHHHHHHHHHHhcCeEEec-CCCCCC-----CCeEEEEec-cChHHHHHHHHHHHHHHH
Q 014603 364 NSDMEFALKLAKEESVIVLP-GITVGL-----KDWLRITFA-VEPSALEDGLGRMKAFYD 416 (422)
Q Consensus 364 ~~~~~~~~~l~~~~gi~v~~-g~~~~~-----~~~iRis~~-~~~~~l~~~~~~l~~~~~ 416 (422)
.+.+ +.+++++.||.++| |..|.. ...|||+++ .+.+|++.+++.+..+++
T Consensus 357 -~Akr-vV~lakeAGV~LT~AGAtfPyg~DP~D~nIRiAPS~P~leel~~Am~~~~~cv~ 414 (425)
T PF12897_consen 357 -TAKR-VVELAKEAGVALTPAGATFPYGKDPRDSNIRIAPSYPSLEELETAMDVFATCVK 414 (425)
T ss_dssp --HHH-HHHHHHHTTEE---TTTTSGGG--TTS-EEEE--SSS-HHHHHHHHHHHHHHHH
T ss_pred -hHHH-HHHHHHHhCceeCCCCCCCCCCCCCCCCcEEecCCCCCHHHHHHHHHHHHHHHH
Confidence 3444 45578899999999 555532 568999999 577999999999887653
No 172
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.96 E-value=5.8e-26 Score=214.48 Aligned_cols=337 Identities=14% Similarity=0.119 Sum_probs=217.2
Q ss_pred eeecCCCCCCCCCCCCcHHHHHHHHHHhhC-------CCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHH
Q 014603 48 IPLGHGDPSAFPSFRTASVAVDAIVHSVRS-------ARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT 120 (422)
Q Consensus 48 i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~-------~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~ 120 (422)
+||++.+ |.++..+|+++++..+.+++ ... .|+...++.+|++++|++++. .+.+++++|.+
T Consensus 1 ~~f~s~d---yLgl~~~~~~~~~~~~a~~~~g~~~~~sr~-~yg~~~~~~~LE~~lA~~~g~-------e~al~~~sG~~ 69 (392)
T PLN03227 1 LNFATHD---FLSTSSSPTLRQTALESLSHYGCGSCGPRG-FYGTIDAHLELEQCMAEFLGT-------ESAILYSDGAS 69 (392)
T ss_pred CCCcCcC---ccCCCCCHHHHHHHHHHHHHhCCCCccccc-ccCChHHHHHHHHHHHHHhCC-------CcEEEecCcHH
Confidence 4676666 66778889999999998875 222 476666789999999999942 24555555555
Q ss_pred HHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhc-----------CCceEEEE
Q 014603 121 QAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALAD-----------ENTVALVI 189 (422)
Q Consensus 121 ~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-----------~~~~~i~i 189 (422)
+. ..++.+++++||.|+++++.|.++...+...+.+++.++..+. -+++.+.+.+. ++++++++
T Consensus 70 a~-~~~i~~l~~~GD~Vl~~~~~h~s~~~~~~l~~~~~~~~~~~d~----~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~ 144 (392)
T PLN03227 70 TT-SSTVAAFAKRGDLLVVDRGVNEALLVGVSLSRANVRWFRHNDM----KDLRRVLEQVRAQDVALKRKPTDQRRFLVV 144 (392)
T ss_pred HH-HHHHHHhCCCCCEEEEeccccHHHHHHHHHcCCeEEEeCCCCH----HHHHHHHHHhhhhccccccccCCCcEEEEE
Confidence 44 4777788999999999999999988877777777776654311 13333333332 35677787
Q ss_pred eCCCCCcccccCHHHHHHHHHHHHHcCcEEEEccccccccc--CCCCCCCccccCC-CCCeEEEecCccccCCCCceeEE
Q 014603 190 INPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAF--GNTPFVPMGVFGS-IVPVLTLGSISKRWIVPGWRLGW 266 (422)
Q Consensus 190 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~--~~~~~~~~~~~~~-~~~~i~i~s~sK~~~~~G~r~G~ 266 (422)
..+.||+|.+++ ++++.++|++||+++|+||+|+.... .|........+.+ .+..+++.|+||.++..| |+
T Consensus 145 E~v~~~~G~i~~---l~~i~~l~~~~g~~livDe~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~g~~g---g~ 218 (392)
T PLN03227 145 EGLYKNTGTLAP---LKELVALKEEFHYRLILDESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAFGSVG---GM 218 (392)
T ss_pred cCCcCCCCcccC---HHHHHHHHHHcCCEEEEECcccccccCCCCCcHHHHcCCCCCCCceEEEeechhhhhccC---cE
Confidence 888999999976 77889999999999999999983222 2222111111111 122488889999875444 88
Q ss_pred EEeeCCCCcccchhHHHHHHhhh-hh--ccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC-
Q 014603 267 LVTSDPNGILQDSGIVDSIKSFL-NI--SSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCP- 342 (422)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~- 342 (422)
++++ +++++.++... .. ....++..+.++..++....+ .+++.++++++.+++++.|++. ++..+
T Consensus 219 v~~~--------~~~~~~~~~~~~~~~~~~~~~p~~~~aa~~al~~~~~--~~~~~~~l~~~~~~l~~~L~~~-~~~~~~ 287 (392)
T PLN03227 219 TVGS--------EEVVDHQRLSGSGYCFSASAPPFLAKADATATAGELA--GPQLLNRLHDSIANLYSTLTNS-SHPYAL 287 (392)
T ss_pred EecC--------HHHHHHHHHhCcCccccCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHhc-CCcccc
Confidence 8765 45666554332 12 222345566666666643211 3456777888888888888752 21101
Q ss_pred --------CCCCCceEEEEecCcccccC-C---CCHHHHHHHHHHhcCeEEecCC-------CCCCCCeEEEEec--cCh
Q 014603 343 --------KKPEGSMFVMVKLNYSLLEG-I---NSDMEFALKLAKEESVIVLPGI-------TVGLKDWLRITFA--VEP 401 (422)
Q Consensus 343 --------~~~~~g~~~~~~~~~~~~~~-~---~~~~~~~~~l~~~~gi~v~~g~-------~~~~~~~iRis~~--~~~ 401 (422)
.....++++.+.+....... . ....++...+ .++|+.+.+.. .+.++..+|++++ +++
T Consensus 288 ~~rg~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~Gi~~~~~~~~~~~~~~~~P~~~iR~~~~~~~t~ 366 (392)
T PLN03227 288 KLRNRLVITSDPISPIIYLRLSDQEATRRTDETLILDQIAHHS-LSEGVAVVSTGGHVKKFLQLVPPPCLRVVANASHTR 366 (392)
T ss_pred ccccccccCCCCCCCEEEEEeCCHHHhhhhhhhhHHHHHHHHH-HHCCCEEEecccccCCcCCCCCCceEEEEecCCCCH
Confidence 11223556666664311000 0 0012444444 56799986522 1223578999997 799
Q ss_pred HHHHHHHHHHHHHHHHh
Q 014603 402 SALEDGLGRMKAFYDRH 418 (422)
Q Consensus 402 ~~l~~~~~~l~~~~~~~ 418 (422)
+|+++++++|++++++.
T Consensus 367 eei~~~~~~l~~~~~~~ 383 (392)
T PLN03227 367 EDIDKLLTVLGEAVEAI 383 (392)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999998765
No 173
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.95 E-value=8.2e-26 Score=216.31 Aligned_cols=355 Identities=15% Similarity=0.162 Sum_probs=227.9
Q ss_pred cCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHH
Q 014603 42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ 121 (422)
Q Consensus 42 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 121 (422)
.+|..++||..|..+...+ ..+|.+.+++.+++.+... .+.+....+ ....+++++....+.+. .+.++++++|++
T Consensus 38 ~dG~~~lD~~~g~~~~~lG-h~~~~i~~a~~~~~~~~~~-~~~~~~~~~-~~~~la~~l~~~~~~~~-~~~~~f~~sGse 113 (425)
T PRK08088 38 VEGREYLDFAGGIAVLNTG-HLHPKVVAAVEAQLKKLSH-TCFQVLAYE-PYLELCEKMNQKVPGDF-AKKTLLVTTGSE 113 (425)
T ss_pred CCCCEEEEcCCchhhcCCC-CCCHHHHHHHHHHHhhCCC-ccccccCCH-HHHHHHHHHHHhCCCCC-CCEEEEeCCcHH
Confidence 3688899999887664333 3588999999999976432 222212223 33467777765443222 247888888889
Q ss_pred HHHHHHHHhc--CCCCEEEecCCCccchHHHHhhCCCeEE--------------EeeccC-CCCccc--CHHHHHHhhc-
Q 014603 122 AIEVILTVLA--RPGANILLPRPGFPYYEARATHSHLEVR--------------HFDLLP-AKGWEV--DLDAVEALAD- 181 (422)
Q Consensus 122 a~~~~~~~l~--~~gd~Vl~~~~~~~~~~~~~~~~g~~~~--------------~~~~~~-~~~~~~--d~~~l~~~~~- 181 (422)
|++.+++... .....|+..+++|++....+...+.... ..+... ..+... +++.+++.+.
T Consensus 114 a~e~Alklar~~~~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~ 193 (425)
T PRK08088 114 AVENAVKIARAATKRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGVSEDDAIASIERIFKN 193 (425)
T ss_pred HHHHHHHHHHHHhCCCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCccccCccHHHHHHHHHHHHHh
Confidence 8888776542 1235677779999998665554432211 111100 011001 1445777664
Q ss_pred ---CCceEEEEeCC--CCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccc
Q 014603 182 ---ENTVALVIINP--GNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKR 256 (422)
Q Consensus 182 ---~~~~~i~i~~p--~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~ 256 (422)
.+..++++..| ++++...++.+.+++|.++|+++|+++|+||+|+++.+.|... .+...+ .+..+.||||.
T Consensus 194 ~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g~~~-~~~~~~---~~pdi~s~sK~ 269 (425)
T PRK08088 194 DAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTGTLF-AMEQMG---VAADLTTFAKS 269 (425)
T ss_pred ccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchh-HHhhcC---CCCCEEEEecc
Confidence 24455667777 5666678899999999999999999999999999876655321 221222 12447899999
Q ss_pred cCCCCceeEEEEeeCCCCcccchhHHHHHHhhh-hhccCcchHHHHHHHHHHhhch-HHHHHHHHHHHHHHHHHHHHHhh
Q 014603 257 WIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQGAVPQILEKTE-EEFFSKITDILRETADICCDRLK 334 (422)
Q Consensus 257 ~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~L~ 334 (422)
++ +|+|+||++++ +++++.+.... ..+.+.+++.|+++.++|+... +..+++.++..+.+++.+.+.++
T Consensus 270 l~-~G~rig~v~~~--------~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 340 (425)
T PRK08088 270 IA-GGFPLAGVTGR--------AEVMDAIAPGGLGGTYAGNPIACAAALAVLKVFEQENLLQKANALGEKLKDGLLAIAE 340 (425)
T ss_pred cc-CCCcceeeEec--------HHHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 75 89999999996 46777775544 2345778899999999998753 34455555554455555554444
Q ss_pred cCCCCCCCCCCCCceEEEEecCcccc---cCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHH
Q 014603 335 EIPCITCPKKPEGSMFVMVKLNYSLL---EGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLG 409 (422)
Q Consensus 335 ~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~ 409 (422)
+.|.+..+ ... |.++|+.+..... +......++...+ .++||.+.|+..+ .+.+|++++ .++++|+++++
T Consensus 341 ~~~~~~~v-~g~-G~~~~l~l~~~~~~~~p~~~~~~~l~~~~-~~~Gv~~~~~~~~--~~~iRl~~~~~~t~~ei~~~i~ 415 (425)
T PRK08088 341 KHPEIGDV-RGL-GAMIAIELFEDGDHSKPNAKLTAQIVARA-RDKGLILLSCGPY--YNVLRILVPLTIEDAQIRQGLE 415 (425)
T ss_pred hCCCeEEE-ecc-ceEEEEEEecCCCCCCCCHHHHHHHHHHH-HhCCCEEecCCCC--CCEEEEECCCCcCHHHHHHHHH
Confidence 55543312 222 8899999842110 0001234455544 5679998876544 488999998 57999999999
Q ss_pred HHHHHHHHh
Q 014603 410 RMKAFYDRH 418 (422)
Q Consensus 410 ~l~~~~~~~ 418 (422)
+|.+++++.
T Consensus 416 ~l~~~l~~~ 424 (425)
T PRK08088 416 IIAQCFDEA 424 (425)
T ss_pred HHHHHHHhh
Confidence 999998753
No 174
>PLN00144 acetylornithine transaminase
Probab=99.95 E-value=9.8e-26 Score=212.20 Aligned_cols=341 Identities=15% Similarity=0.137 Sum_probs=223.7
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 122 (422)
+|+.++||..|......+ ..+|++.+++.+++..... +.. ....+....+++.+.+.. ..+.++++++|++|
T Consensus 13 dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~q~~~~~~--~~~-~~~~~~~~~la~~l~~~~----~~~~v~f~~sGseA 84 (382)
T PLN00144 13 EGKEYLDMAAGIAVNALG-HGDPDWVKAVAEQAGTLAH--VSN-VYHTIPQVELAKRLVASS----FADRVFFCNSGTEA 84 (382)
T ss_pred CCCEEEECCcCHHhccCC-CCCHHHHHHHHHHHHhcCC--ccc-cccCHHHHHHHHHHHhcC----CCCeEEEeCCcHHH
Confidence 689999998886443222 4579999999999976321 111 112344455666664422 24689999999999
Q ss_pred HHHHHHHhc---CC------------CCEEEecCCCccchHHHHhhCCCeE-E---EeeccCCCC--cccCHHHHHHhhc
Q 014603 123 IEVILTVLA---RP------------GANILLPRPGFPYYEARATHSHLEV-R---HFDLLPAKG--WEVDLDAVEALAD 181 (422)
Q Consensus 123 ~~~~~~~l~---~~------------gd~Vl~~~~~~~~~~~~~~~~g~~~-~---~~~~~~~~~--~~~d~~~l~~~~~ 181 (422)
++.+++... .. ..+|+....+||+....+....... . ..+..+... ...|++.+++.+.
T Consensus 85 ~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~ 164 (382)
T PLN00144 85 NEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEYGNLEAARKLIQ 164 (382)
T ss_pred HHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCCCCHHHHHHhcC
Confidence 999987542 10 2579999999998865554332211 0 011111000 0126888988876
Q ss_pred CCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCC-ccccCCCCCeEEEecCccccC
Q 014603 182 ENTVALVIINP-GNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVP-MGVFGSIVPVLTLGSISKRWI 258 (422)
Q Consensus 182 ~~~~~i~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~-~~~~~~~~~~i~i~s~sK~~~ 258 (422)
++..+.+++.| +||.|.. ++.+.+++|.++|++||+++|+||+|.++.++|..... ...+.+| +.++||.+
T Consensus 165 ~~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~PD-----i~t~sK~l- 238 (382)
T PLN00144 165 KGKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGYLWAHEAYGVEPD-----IMTLAKPL- 238 (382)
T ss_pred CCCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchHhhhhhcCCCCC-----EEEecccc-
Confidence 55555666666 7885543 35566999999999999999999999998877753221 3334443 66789995
Q ss_pred CCCceeEEEEeeCCCCcccchhHHHHHHhhh-hhccCcchHHHHHHHHHHhhchH-HHHHHHHHHHHHHHHHHHHHhhcC
Q 014603 259 VPGWRLGWLVTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQGAVPQILEKTEE-EFFSKITDILRETADICCDRLKEI 336 (422)
Q Consensus 259 ~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~ 336 (422)
.+|+|+|+++++ +++++.+.... ..+.+.+++.++++.+.|+...+ ...++..+.-+..++.+.+.+++.
T Consensus 239 ~~G~pig~v~~~--------~~~~~~~~~~~~~~T~~~~pl~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~ 310 (382)
T PLN00144 239 AGGLPIGAVLVT--------EKVASAINPGDHGSTFAGGPLVCNAALAVLDKISKPGFLASVAKKGEYLRELLRRKLGGN 310 (382)
T ss_pred cCCcceEEEEEc--------HHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhhC
Confidence 688999999996 36777665432 33457788999999977765432 222222222233344455555556
Q ss_pred CCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHHHHHH
Q 014603 337 PCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGRMKAF 414 (422)
Q Consensus 337 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~l~~~ 414 (422)
|.+. . ....|+++|+.+.. ....+... +.++||.+.|+.. .+.+|++++ .+++++++++++|.++
T Consensus 311 ~~~~-~-vrg~G~~~~l~l~~-------~~~~~~~~-~~~~Gv~i~~~~~---~~~lrl~p~~~~~~~~i~~~~~~l~~~ 377 (382)
T PLN00144 311 PHVK-E-VRGVGLLVGIQLDV-------PAGPLVDA-CRDSGLLVLTAGK---GDVVRLVPPLVISEAELEQAVEILADC 377 (382)
T ss_pred CCce-e-eecCceEEEEEecC-------ccHHHHHH-HHHCCeEEeecCC---CCEEEEeCCCccCHHHHHHHHHHHHHH
Confidence 5443 1 22368999999842 24455555 4667999998732 489999998 6789999999999999
Q ss_pred HHHh
Q 014603 415 YDRH 418 (422)
Q Consensus 415 ~~~~ 418 (422)
+.++
T Consensus 378 l~~~ 381 (382)
T PLN00144 378 LPAL 381 (382)
T ss_pred HHhc
Confidence 8764
No 175
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.95 E-value=1.7e-26 Score=216.47 Aligned_cols=309 Identities=14% Similarity=0.117 Sum_probs=219.7
Q ss_pred cHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcC-----------
Q 014603 64 ASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLAR----------- 132 (422)
Q Consensus 64 ~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~----------- 132 (422)
+..+.+.+...++... ..|....+..++++.+++++.+.+|.+.+.+++++|+|+|+++..++.+++.
T Consensus 12 ~~~~~~~~~~~~n~~~-~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~ 90 (345)
T cd06450 12 PALLLEMLTSAKNAID-FTWDESPAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGG 90 (345)
T ss_pred HHHHHHHHHHhcCCCC-cccccCchhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccc
Confidence 3455566666655433 4588878889999999999988877654556899999999999999988742
Q ss_pred -C--CCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC------CceEEEEeCCCCCcccccCHH
Q 014603 133 -P--GANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE------NTVALVIINPGNPCGNVYTYQ 203 (422)
Q Consensus 133 -~--gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~i~i~~p~nptG~~~~~~ 203 (422)
+ ++.|+++.++|..+...+...|.+++.++.++. +.+|++.|++.+++ +++++++++|+||||.+ +
T Consensus 91 ~~~~~~~v~~~~~~h~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~---~ 165 (345)
T cd06450 91 RGIDKLVIVCSDQAHVSVEKAAAYLDVKVRLVPVDED--GRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAI---D 165 (345)
T ss_pred cccCCeEEEEcCcchhHHHHHHHHHhcCeEEeeeCCC--CCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCC---C
Confidence 2 347888999999988888888999999987643 36899999998876 67888899999999998 6
Q ss_pred HHHHHHHHHHHcCcEEEEcccccccccCCCCCCC-ccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHH
Q 014603 204 HLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVP-MGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIV 282 (422)
Q Consensus 204 ~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~-~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 282 (422)
++++|.++|+++|+++++|++|+.+......... ...+. .-.++..|++|++ .++.++|+++.
T Consensus 166 ~~~~i~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~--~~d~~~~s~~K~l-~~p~g~g~~~~------------- 229 (345)
T cd06450 166 PLEEIADLAEKYDLWLHVDAAYGGFLLPFPEPRHLDFGIE--RVDSISVDPHKYG-LVPLGCSAVLV------------- 229 (345)
T ss_pred CHHHHHHHHHHhCCeEEEechhhHHHhhChhhHHHhcCcc--ccCEEEEchhHhh-CCCcchHHHHH-------------
Confidence 7899999999999999999999875532111111 01111 1125667999974 45566777653
Q ss_pred HHHHhhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccccC
Q 014603 283 DSIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEG 362 (422)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 362 (422)
. .+.+.++...+. ...+++..++..++++++.+.|++++++.++..+..+ ++.+.++.....+
T Consensus 230 ~-------------~~~~~~~l~~l~---~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~-iv~f~~~~~~~~~ 292 (345)
T cd06450 230 R-------------ALKLWATLRRFG---RDGYGEHIDRIVDLAKYLAELIRADPGFELLGEPNLS-LVCFRLKPSVKLD 292 (345)
T ss_pred H-------------HHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCcee-EEEEEECCcchhh
Confidence 1 334444444443 4567888899999999999999999887644334444 4445554310000
Q ss_pred CCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--c-ChHHHHHHHHHHHH
Q 014603 363 INSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--V-EPSALEDGLGRMKA 413 (422)
Q Consensus 363 ~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~-~~~~l~~~~~~l~~ 413 (422)
.+..++...+ .++|+.+.++..+..+.++|++++ . +.++++++++.|++
T Consensus 293 -~~~~~i~~~L-~~~g~~~~~~~~~~~~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 293 -ELNYDLSDRL-NERGGWHVPATTLGGPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred -HHHHHHHHHH-HhcCCEEEEeeEECCeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 1345666665 555655555554445678999997 3 88999999999875
No 176
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.95 E-value=2.1e-25 Score=211.68 Aligned_cols=342 Identities=16% Similarity=0.166 Sum_probs=222.0
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCC--CCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSAR--FNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT 120 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~ 120 (422)
+|+.+|||..|....+.++ .+|.+.+++.+++.+.. ...|. .....++.+.++++. ..+.++++++|+
T Consensus 33 dG~~ylD~~~g~~~~~lGh-~~p~v~~a~~~~~~~~~~~~~~~~-~~~~~~la~~L~~~~--------~~~~~~f~~SGs 102 (397)
T TIGR03246 33 QGKEYIDFAGGIAVNALGH-AHPELVKALIEQADKLWHIGNGYT-NEPVLRLAKKLVDAT--------FADKVFFCNSGA 102 (397)
T ss_pred CCCEEEECCcCHhhccCCC-CCHHHHHHHHHHHHhcccccCccC-CHHHHHHHHHHHhhC--------CCCEEEEeCCcH
Confidence 6889999998865544555 58999999999987521 11121 122345555555543 236899999999
Q ss_pred HHHHHHHHHhc-------C-CCCEEEecCCCccchHHHHhhC-CCeEEE---eeccCC--CCcccCHHHHHHhhcCCceE
Q 014603 121 QAIEVILTVLA-------R-PGANILLPRPGFPYYEARATHS-HLEVRH---FDLLPA--KGWEVDLDAVEALADENTVA 186 (422)
Q Consensus 121 ~a~~~~~~~l~-------~-~gd~Vl~~~~~~~~~~~~~~~~-g~~~~~---~~~~~~--~~~~~d~~~l~~~~~~~~~~ 186 (422)
+|++.+++... . ..++|+..+.+||+....+... +..... -|..+. .--..|++.+++.+.+++.+
T Consensus 103 eA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~aa 182 (397)
T TIGR03246 103 EANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPYNDLAAAKALISDKTCA 182 (397)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCCCCHHHHHHHhccCeEE
Confidence 99999998752 1 2367888888898875443322 211100 000000 00012789999988766666
Q ss_pred EEEeCCCCCcccc-cCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeE
Q 014603 187 LVIINPGNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLG 265 (422)
Q Consensus 187 i~i~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G 265 (422)
+++..++++.|.. ++.+++++|.++|++||+++|+||+|.++.++|... ....++..++ +.+++|.++ +|+|+|
T Consensus 183 vi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~~~-a~~~~gv~pD---i~t~~K~lg-gG~pig 257 (397)
T TIGR03246 183 VIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGELY-AYMHYGVTPD---ILTSAKALG-GGFPIG 257 (397)
T ss_pred EEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccccch-hhhhcCCCCC---EEEeehhhh-CCccee
Confidence 6655445556654 478999999999999999999999998887776532 2222332222 336799975 789999
Q ss_pred EEEeeCCCCcccchhHHHHHHhhh-hhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCC-CCCCC
Q 014603 266 WLVTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPC-ITCPK 343 (422)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~-~~~~~ 343 (422)
+++++ +++++.+.... ..+.+.+++.++++.++|+... -++..++++++.+++.+.|+++.. ..++.
T Consensus 258 av~~~--------~~i~~~~~~~~~~~t~~~~p~~~aaa~a~l~~~~---~~~l~~~~~~~~~~l~~~L~~l~~~~~~~~ 326 (397)
T TIGR03246 258 AMLTT--------TEIAAHLKVGTHGTTYGGNPLACAVAGKVLDLVN---TPELLAGVKQRHDLFVDGLEKINARYNVFS 326 (397)
T ss_pred EEEEc--------HHHHHhccCCCcCCCCCCCHHHHHHHHHHHHHHh---hccHHHHHHHHHHHHHHHHHHHHhcCCCeE
Confidence 99986 46777665432 2334577888888888887532 234667777888888888776521 11111
Q ss_pred -CCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHHHHHHHHHh
Q 014603 344 -KPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 344 -~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~l~~~~~~~ 418 (422)
.+..|.++.+.+.... ......+...+ .++|+.+.+.. .+++|++++ ++++++++++++|++++++.
T Consensus 327 ~vrg~G~~~~i~~~~~~---~~~~~~~~~~l-~~~Gv~~~~~g----~~~lR~~p~~~~t~~~i~~~~~~l~~~l~~~ 396 (397)
T TIGR03246 327 EIRGKGLLIGAVLTEAY---QGKAKQFVNAA-AEEGVIALIAG----PNVVRFAPSLVISDDDIDEGLARFERAIEQV 396 (397)
T ss_pred eeecCceEEEEEEcCch---hhHHHHHHHHH-HHCCeEEeecC----CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 1223555555553210 01245565555 55699987642 478999765 78999999999999998753
No 177
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.95 E-value=2.1e-25 Score=213.03 Aligned_cols=334 Identities=13% Similarity=0.113 Sum_probs=223.6
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCC-CCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNC-YSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ 121 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~-y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 121 (422)
+|+.++||..|...... -..+|.+.+++.++++...... +.......++++.++++. ..+.+++++||++
T Consensus 39 ~g~~~lD~~~~~~~~~~-Gh~~~~i~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--------~~~~~~~~~SGs~ 109 (401)
T PRK00854 39 DGNRYLDCLSAYSAVNQ-GHCHPKILAAMVEQAGRLTLTSRAFRNDQLAPLYEELAALT--------GSHKVLPMNSGAE 109 (401)
T ss_pred CCCEEEEcCcchhhccC-CCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhhC--------CCCEEEEeCCcHH
Confidence 68889999887644322 2347899999999987632211 112223456666666654 2358999999999
Q ss_pred HHHHHHHHhcC---------CC-CEEEecCCCccchHHHHhhCCCe-------------EEEeeccCCCCcccCHHHHHH
Q 014603 122 AIEVILTVLAR---------PG-ANILLPRPGFPYYEARATHSHLE-------------VRHFDLLPAKGWEVDLDAVEA 178 (422)
Q Consensus 122 a~~~~~~~l~~---------~g-d~Vl~~~~~~~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~d~~~l~~ 178 (422)
|++.++..+.. +| ++|++...+|++....+...+.. +..++ ..|++.+++
T Consensus 110 A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~d~~~le~ 182 (401)
T PRK00854 110 AVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVP-------FGDAEALEA 182 (401)
T ss_pred HHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeC-------CCCHHHHHH
Confidence 99999988742 23 68888888888865443322211 11121 137899999
Q ss_pred hhcCCceEEEEeCCCCCcccccC-HHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCcccc
Q 014603 179 LADENTVALVIINPGNPCGNVYT-YQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRW 257 (422)
Q Consensus 179 ~~~~~~~~i~i~~p~nptG~~~~-~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~ 257 (422)
.+.++++++++++|+||+|.+++ .+++++|.++|++||+++|+||+|+++.++|... .....+...+++ + ++|.+
T Consensus 183 ~i~~~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g~~~-~~~~~g~~~D~~-~--~~K~l 258 (401)
T PRK00854 183 AITPNTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTGKLL-AEEHEGIEADVT-L--IGKAL 258 (401)
T ss_pred HhCCCeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCchHh-HHhhcCCCCCEE-E--ecccc
Confidence 99888999999999999999886 4569999999999999999999998776665321 111112122233 3 36997
Q ss_pred CCCCceeEEEEeeCCCCcccchhHHHHHHhhh-hhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcC
Q 014603 258 IVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEI 336 (422)
Q Consensus 258 ~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 336 (422)
+...+|+|+++++ +++++.+.... ..+.+.+++.++++.++|+...+ ....+.++++.+++.+.|+++
T Consensus 259 ~gg~~~ig~v~~~--------~~~~~~l~~~~~~~t~~~~~~~~aa~~a~L~~l~~---~~~~~~~~~~~~~l~~~L~~~ 327 (401)
T PRK00854 259 SGGFYPVSAVLSN--------SEVLGVLKPGQHGSTFGGNPLACAVARAALKVLTE---EGMIENAAEMGAYFLEGLRSI 327 (401)
T ss_pred cCCccCeEEEEEc--------HHHHhcccCCCCCCCCCcCHHHHHHHHHHHHHHHH---cCHHHHHHHHHHHHHHHHHhh
Confidence 6544799999986 45666665332 22345688899999998875321 335677888888888888876
Q ss_pred CCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHHHHHH
Q 014603 337 PCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGRMKAF 414 (422)
Q Consensus 337 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~l~~~ 414 (422)
....+......|.++.+.+.... ....++...+. ++||.+.+.. .+++|++++ +++++|++++++|+++
T Consensus 328 ~~~~~~~~~g~g~~~~i~~~~~~----~~~~~~~~~L~-~~GV~v~~~~----~~~lR~~p~~~~t~e~i~~~i~~l~~~ 398 (401)
T PRK00854 328 RSNIVREVRGRGLMLAVELEPEA----GGARQYCEALK-ERGLLAKDTH----DHTIRLAPPLVITREQVDWALEQIAKV 398 (401)
T ss_pred ccCceEEEeccceEEEEEEecCc----hhHHHHHHHHH-HCCeEEecCC----CCEEEEeCCcccCHHHHHHHHHHHHHH
Confidence 32111111222444444442210 13456666665 4699997532 479999985 7899999999999987
Q ss_pred HH
Q 014603 415 YD 416 (422)
Q Consensus 415 ~~ 416 (422)
+.
T Consensus 399 l~ 400 (401)
T PRK00854 399 LA 400 (401)
T ss_pred hh
Confidence 64
No 178
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.95 E-value=2.3e-25 Score=211.02 Aligned_cols=314 Identities=18% Similarity=0.169 Sum_probs=216.5
Q ss_pred cHHHHHHHHHHhhCC--CCCCCCC-CCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhc------CCC
Q 014603 64 ASVAVDAIVHSVRSA--RFNCYSS-TVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLA------RPG 134 (422)
Q Consensus 64 ~~~v~~a~~~~~~~~--~~~~y~~-~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~------~~g 134 (422)
.+.+.+++....... ....|+. .....++++.+++++ +++++++++++|+++++..++.++. ++|
T Consensus 33 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~------g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g 106 (373)
T TIGR03812 33 HPIAVKAYDMFIETNLGDPGLFPGTKKIEEEVVGSLGNLL------HLPDAYGYIVSGGTEANIQAVRAAKNLAREEKRT 106 (373)
T ss_pred hHHHHHHHHHHhhcCCCCcccCccHHHHHHHHHHHHHHHh------CCCCCCeEEeccHHHHHHHHHHHHHHHHhccCCC
Confidence 355667776665432 1112321 122356677777777 4566788899999999988877653 467
Q ss_pred CEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHH
Q 014603 135 ANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKK 214 (422)
Q Consensus 135 d~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~ 214 (422)
|+|++++++|.++...++..|++++.++.+ .++.+|++++++.+++++..++++.|+||||... ++++|.++|++
T Consensus 107 ~~vl~~~~~h~~~~~~~~~~G~~~~~v~~~--~~~~~d~~~l~~~l~~~~~~vv~~~~~~~tG~~~---~~~~i~~l~~~ 181 (373)
T TIGR03812 107 PNIIVPESAHFSFEKAAEMLGLELRYAPLD--EDYTVDVKDVEDLIDDNTIGIVGIAGTTELGQID---DIEELSKIALE 181 (373)
T ss_pred cEEEECCcchHHHHHHHHHcCCeEEEEeeC--CCCCcCHHHHHHHHhhCcEEEEEECCCCCCCccC---CHHHHHHHHHH
Confidence 899999999999999999999999999875 3467899999999887776666666899999994 57788888999
Q ss_pred cCcEEEEcccccccccC----CCC--CCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhh
Q 014603 215 LGIMVIADEVYDHLAFG----NTP--FVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSF 288 (422)
Q Consensus 215 ~~~~li~D~~~~~~~~~----~~~--~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~ 288 (422)
+|+++|+|++|+.+... +.. ...+...+.+ .+..|.+|+ +.++.|+|+++..+ +++.+.+...
T Consensus 182 ~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~d---~~~~s~~K~-~~~~~~~G~~~~~~-------~~~~~~l~~~ 250 (373)
T TIGR03812 182 NGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGVQ---SITIDPHKM-GLSPIPAGGILFRS-------KSYLKYLSVD 250 (373)
T ss_pred cCCeEEEEcCchhHHHHHHhcCCCCCCccccCCCCC---EEEECcccc-CCCcCCceEEEEeC-------HHHHhhhccc
Confidence 99999999999754311 000 1111111222 455688895 67777888776543 3455554321
Q ss_pred hhh---------ccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCccc
Q 014603 289 LNI---------SSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSL 359 (422)
Q Consensus 289 ~~~---------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~ 359 (422)
..+ .++.+.....++..+++...+..+++..+++.++++++++.|+++ ++..+..|. ..++.+.++
T Consensus 251 ~~~~~~~~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~-~~~v~~~~~--- 325 (373)
T TIGR03812 251 APYLTVKKQATITGTRSGASAAATYAVIKYLGREGYRKIVAECMENTRYLVEELKKI-GFEPVIEPV-LNIVAFEVD--- 325 (373)
T ss_pred CcccCCCCCcceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEEcCCC-ceEEEEEeC---
Confidence 111 123445566677777775556778888999999999999999998 443232333 445556554
Q ss_pred ccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHHHHH
Q 014603 360 LEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGRMKA 413 (422)
Q Consensus 360 ~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~l~~ 413 (422)
+..++...| .++||.+.++. .++++|++++ +++++++++++.|++
T Consensus 326 -----~~~~v~~~L-~~~gi~v~~~~---~~~~iRis~~~~~t~edid~l~~~L~~ 372 (373)
T TIGR03812 326 -----DPEEVRKKL-RDRGWYVSVTR---CPKALRIVVMPHVTREHIEEFLEDLKE 372 (373)
T ss_pred -----CHHHHHHHH-HHCCceeccCC---CCCEEEEEEECCCCHHHHHHHHHHHhh
Confidence 234566665 55699997653 3578999998 789999999999875
No 179
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.95 E-value=2.6e-25 Score=208.42 Aligned_cols=289 Identities=20% Similarity=0.211 Sum_probs=204.2
Q ss_pred CCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccch----HHHHhhCCC
Q 014603 81 NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYY----EARATHSHL 156 (422)
Q Consensus 81 ~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~----~~~~~~~g~ 156 (422)
.+|+. ....+|++.++++.+ . +..++++||++|+..++ .++++||+|++++|.|++. ...++..|+
T Consensus 47 ~r~~~-pt~~~le~~la~l~g------~--~~~~~~~sG~~ai~~~~-~ll~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~ 116 (366)
T PRK08247 47 SRTGN-PTRGVLEQAIADLEG------G--DQGFACSSGMAAIQLVM-SLFRSGDELIVSSDLYGGTYRLFEEHWKKWNV 116 (366)
T ss_pred cCCCC-chHHHHHHHHHHHhC------C--CcEEEEcCHHHHHHHHH-HHhCCCCEEEEecCCcCcHHHHHHHHhhccCc
Confidence 34443 457899999999983 2 33577888899999876 5778999999999999874 334456788
Q ss_pred eEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCC
Q 014603 157 EVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFV 236 (422)
Q Consensus 157 ~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~ 236 (422)
+++.++. .|++.+++.++++++++++++|+||+|.. .++++|+++|+++|+++|+|++|...... .
T Consensus 117 ~v~~vd~-------~d~~~l~~~i~~~tklv~le~P~NP~~~~---~dl~~I~~la~~~g~~lIvD~t~~~~~~~----~ 182 (366)
T PRK08247 117 RFVYVNT-------ASLKAIEQAITPNTKAIFIETPTNPLMQE---TDIAAIAKIAKKHGLLLIVDNTFYTPVLQ----R 182 (366)
T ss_pred eEEEECC-------CCHHHHHHhcccCceEEEEECCCCCCCcH---HHHHHHHHHHHHcCCEEEEECCCcccccc----C
Confidence 8877753 37899999998899999999999998765 89999999999999999999999532211 1
Q ss_pred CccccCCCCCeEEEecCccccCCC-CceeEEEEeeCCCCcccchhHHHHHHhhhhh-ccCcchHHHHHHHHHHhhchHHH
Q 014603 237 PMGVFGSIVPVLTLGSISKRWIVP-GWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQGAVPQILEKTEEEF 314 (422)
Q Consensus 237 ~~~~~~~~~~~i~i~s~sK~~~~~-G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~ 314 (422)
++ .. ...+++.|+||.++++ +++.|++++++ +++.+++...... ....+++.++.+...|+.
T Consensus 183 p~-~~---g~di~i~S~sK~~~g~~d~~~G~iv~~~-------~~l~~~~~~~~~~~g~~~s~~~a~l~~~~l~t----- 246 (366)
T PRK08247 183 PL-EE---GADIVIHSATKYLGGHNDVLAGLVVAKG-------QELCERLAYYQNAAGAVLSPFDSWLLIRGMKT----- 246 (366)
T ss_pred ch-hc---CCcEEEeecceeccCCCceeeeEEecCh-------HHHHHHHHHHHHhcCCCCChHHHHHHHhccCc-----
Confidence 11 11 2249999999998653 56889988753 3566666655543 235566777777776664
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC-CCceEEEEecCcccccCCCCHHHHHHH---------HHHhcCeEEecC
Q 014603 315 FSKITDILRETADICCDRLKEIPCITCPKKP-EGSMFVMVKLNYSLLEGINSDMEFALK---------LAKEESVIVLPG 384 (422)
Q Consensus 315 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~---------l~~~~gi~v~~g 384 (422)
+..+.++.+++++.+.+.|+++|++..+..| .+|++.| .++... ....+... +.....+.+.|+
T Consensus 247 l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~P~~gg~~sf-~~~~~~-----~~~~~~~~l~~~~~~~slg~~~sl~~~p~ 320 (366)
T PRK08247 247 LALRMRQHEENAKAIAAFLNEQPGVTDVLYPGRGGMLSF-RLQDEE-----WVNPFLKSLKLITFAESLGGVESFITYPA 320 (366)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCeeEEecCCcCcEEEE-EECCHH-----HHHHHHHcCCcceEccCCCCCceEEECCc
Confidence 4556667799999999999999888744456 6676665 564210 01122221 112334556676
Q ss_pred CCCCC-------------CCeEEEEeccChHHHHHHHHHHHHHHHH
Q 014603 385 ITVGL-------------KDWLRITFAVEPSALEDGLGRMKAFYDR 417 (422)
Q Consensus 385 ~~~~~-------------~~~iRis~~~~~~~l~~~~~~l~~~~~~ 417 (422)
..++. ++.+|+|++. |+++.+++.|++++++
T Consensus 321 ~~~~~~~~~~~r~~~gi~~~~~R~svGl--E~~~dl~~dl~~al~~ 364 (366)
T PRK08247 321 TQTHADIPEEIRIANGVCNRLLRFSVGI--ENVEDLIADLKQAFKQ 364 (366)
T ss_pred ccccccCCHHHHHhcCCCCCeEEEEecc--CCHHHHHHHHHHHHhh
Confidence 43321 3689999997 4677778888888765
No 180
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.95 E-value=1.8e-25 Score=213.47 Aligned_cols=344 Identities=15% Similarity=0.162 Sum_probs=220.3
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCC-CCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNC-YSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ 121 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~-y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 121 (422)
+|+.++||..|...... -..+|.+.+++.+++....... ........++++.++++. ..+.++++++|++
T Consensus 29 dg~~~lD~~~~~~~~~~-Gh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--------~~~~~~~~~SGs~ 99 (400)
T PTZ00125 29 EGKKYYDFLSAYSAVNQ-GHCHPKILAALINQAQKLTLTSRAFYNDVLGLAEKYITDLF--------GYDKVLPMNSGAE 99 (400)
T ss_pred CCCEEEEcccCHhhccC-CcCCHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHhCC--------CCCEEEEeCCcHH
Confidence 68889999888654311 2357899999999986532111 001112334444444432 2368899999999
Q ss_pred HHHHHHHHhcC----------CCCEEEecCCCccchHHHHhhCCCeEEE----eeccCC--CCcccCHHHHHHhhc-CCc
Q 014603 122 AIEVILTVLAR----------PGANILLPRPGFPYYEARATHSHLEVRH----FDLLPA--KGWEVDLDAVEALAD-ENT 184 (422)
Q Consensus 122 a~~~~~~~l~~----------~gd~Vl~~~~~~~~~~~~~~~~g~~~~~----~~~~~~--~~~~~d~~~l~~~~~-~~~ 184 (422)
|++.+++.+.. .+++|++.+.+|++.............. .+..+. .-...|++.+++.++ +++
T Consensus 100 A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~ 179 (400)
T PTZ00125 100 AGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYNDVEALEKLLQDPNV 179 (400)
T ss_pred HHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCCCCHHHHHHHhCCCCe
Confidence 99999987631 3478999999998865443322211100 010000 000138899999886 567
Q ss_pred eEEEEeCCCCCcccccC-HHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCce
Q 014603 185 VALVIINPGNPCGNVYT-YQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWR 263 (422)
Q Consensus 185 ~~i~i~~p~nptG~~~~-~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r 263 (422)
+++++..++||+|.+++ .+.+++|.++|++||+++|+||+|.++.++|... .....+..++++ ++||.++.+++|
T Consensus 180 ~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~~-~~~~~~~~pd~~---~~sK~l~~g~~~ 255 (400)
T PTZ00125 180 AAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKLL-AHDHEGVKPDIV---LLGKALSGGLYP 255 (400)
T ss_pred EEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhh-HHHhcCCCCCEE---EEcccccCCCcC
Confidence 77777677999999885 5569999999999999999999998777666432 111112222222 467998655569
Q ss_pred eEEEEeeCCCCcccchhHHHHHHhhh-hhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcC----CC
Q 014603 264 LGWLVTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEI----PC 338 (422)
Q Consensus 264 ~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~ 338 (422)
+||++++ +++.+.+.... ..+.+.+++.+.++.++|+...+.. ..++++++.+.+++.|+++ +.
T Consensus 256 ig~v~~~--------~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~i~~~~---~~~~~~~~~~~l~~~l~~l~~~~~~ 324 (400)
T PTZ00125 256 ISAVLAN--------DDVMLVIKPGEHGSTYGGNPLACAVAVEALEVLKEEK---LAENAQRLGEVFRDGLKELLKKSPW 324 (400)
T ss_pred cEEEEEc--------HHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 9999986 46777665433 2234667888888888876533222 2344445555555555543 22
Q ss_pred CCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHHHHHHHH
Q 014603 339 ITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGRMKAFYD 416 (422)
Q Consensus 339 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~l~~~~~ 416 (422)
+. ...+ .|.++++.++... + ....++...++ ++||.+.|+. .+++|++++ .+++++++++++|.+++.
T Consensus 325 ~~-~~~~-~g~~~~v~~~~~~--~-~~~~~~~~~l~-~~Gv~v~~~~----~~~lRi~~~~~~~~~~i~~~l~~l~~~l~ 394 (400)
T PTZ00125 325 VK-EIRG-KGLLNAIVFDHSD--G-VNAWDLCLKLK-ENGLLAKPTH----DNIIRFAPPLVITKEQLDQALEIIKKVLK 394 (400)
T ss_pred eE-EEec-ccEEEEEEEccCc--c-hHHHHHHHHHH-HCCeEEeecC----CCEEEEECCccCCHHHHHHHHHHHHHHHH
Confidence 22 1133 4677788775310 0 13456666664 5699998863 578999975 889999999999999998
Q ss_pred Hhcc
Q 014603 417 RHAK 420 (422)
Q Consensus 417 ~~~~ 420 (422)
++..
T Consensus 395 ~~~~ 398 (400)
T PTZ00125 395 SFDS 398 (400)
T ss_pred HHhc
Confidence 8754
No 181
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.95 E-value=3.8e-25 Score=209.03 Aligned_cols=333 Identities=13% Similarity=0.131 Sum_probs=229.6
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCC-CEEEecCHHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPD-DVYLTLGCTQ 121 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~i~~~~g~~~ 121 (422)
+|+.+|||..|.... ++..+|++.+++.+++.... .++. ....++++.+++.+.. .++ .+++++|+++
T Consensus 27 dg~~~lD~~s~~~~~--~lG~~p~v~~a~~~~~~~~~--~~~~-~~~~~~~~~la~~l~~------~~~~~~~~~~SGse 95 (375)
T PRK04260 27 DGKKYLDFSSGIGVT--NLGFHPQVQQALQKQAGLIW--HSPN-LYLNSLQEEVAQKLIG------DKDYLAFFCNSGAE 95 (375)
T ss_pred CCCEEEECCCCcccc--cCCCCHHHHHHHHHHHHhcC--cccC-ccCCHHHHHHHHHHhc------CcCCEEEEcCccHH
Confidence 688899998875332 34447899999999987532 2322 3456788899988742 233 4689999999
Q ss_pred HHHHHHHHhc--CCCCEEEecCCCccchHH-HHhhCCCeEEE------eeccCCCCcccCHHHHHHhhcCCceEEEEeCC
Q 014603 122 AIEVILTVLA--RPGANILLPRPGFPYYEA-RATHSHLEVRH------FDLLPAKGWEVDLDAVEALADENTVALVIINP 192 (422)
Q Consensus 122 a~~~~~~~l~--~~gd~Vl~~~~~~~~~~~-~~~~~g~~~~~------~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p 192 (422)
|+..+++... ..+++|++.+..||+... .....+.+... ++..+... ..|++.+++.+++++.++++..+
T Consensus 96 A~~~Al~~ar~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~dl~~l~~~l~~~~a~vi~e~v 174 (375)
T PRK04260 96 ANEAAIKIARKATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYAI-FNDLNSVKALVNKNTAAVMLELV 174 (375)
T ss_pred HHHHHHHHHHHhcCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEeC-CCCHHHHHHhcCCCeEEEEECCe
Confidence 9998888753 345789999988887532 22222211100 00000000 13788999888767777777788
Q ss_pred CCCccccc-CHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeC
Q 014603 193 GNPCGNVY-TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD 271 (422)
Q Consensus 193 ~nptG~~~-~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~ 271 (422)
+|++|... +.+.++++.++|+++|+++|+||+|.++.++|... .....+..++ +.||||.+ .+|+|+||++++
T Consensus 175 ~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~-~~~~~~~~pd---i~t~sK~l-~~G~~ig~~~~~- 248 (375)
T PRK04260 175 QGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLY-AFEHYGIEPD---IFTLAKGL-ANGVPVGAMLAK- 248 (375)
T ss_pred ECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchh-hhHhhCCCCC---EEEecccc-cCCcceEEEEEc-
Confidence 99999864 56789999999999999999999998876665422 2112222223 34789996 478999999997
Q ss_pred CCCcccchhHHHHHHhhh-hhccCcchHHHHHHHHHHhhch-HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCce
Q 014603 272 PNGILQDSGIVDSIKSFL-NISSDPATFIQGAVPQILEKTE-EEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSM 349 (422)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~ 349 (422)
+++.+.+.... ..+.+.+++.++++.++|+... +...++.++..+.+++.+.+.+.+.+.+. . .+..|.
T Consensus 249 -------~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~-~~~~g~ 319 (375)
T PRK04260 249 -------SSLGGAFGYGSHGSTFGGNKLSMAAASATLDIMLTAGFLEQALENGNYLQEQLQKALQDKETVT-T-VRGLGY 319 (375)
T ss_pred -------HHHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCee-E-Eeccce
Confidence 35666665432 2345668889999999997643 45566667777777777777777664333 2 334689
Q ss_pred EEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHHHHHH
Q 014603 350 FVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGRMKAF 414 (422)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~l~~~ 414 (422)
++|++++. +..++...+ .++||.+.|+. .+.+|++++ .+++++++++++|+++
T Consensus 320 ~~~~~~~~-------~~~~~~~~l-~~~Gi~v~~~~----~~~lR~~~~~~~t~~~i~~~l~~l~~~ 374 (375)
T PRK04260 320 MIGIETTA-------DLSQLVEAA-RDKGLIVLTAG----TNVIRLLPPLTLTKEEIEQGIAILSEV 374 (375)
T ss_pred EEEEEecC-------cHHHHHHHH-HhCCCEEecCC----CCEEEEcCCCccCHHHHHHHHHHHHHh
Confidence 99998843 345565555 56799998753 478999996 6899999999999875
No 182
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.95 E-value=1.4e-25 Score=212.20 Aligned_cols=287 Identities=16% Similarity=0.161 Sum_probs=197.4
Q ss_pred CCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHH----HHhhCCCeEEE
Q 014603 85 STVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEA----RATHSHLEVRH 160 (422)
Q Consensus 85 ~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~----~~~~~g~~~~~ 160 (422)
+..+..+|+++++++.+ .+++++++||++|+..++.+++++||+|+++.|.|..+.. .++..|++++.
T Consensus 62 ~~p~~~~Le~~iA~~~g--------~~~~l~~~sG~~Ai~~al~~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~ 133 (400)
T PRK06234 62 GNPTSTEVENKLALLEG--------GEAAVVAASGMGAISSSLWSALKAGDHVVASDTLYGCTFALLNHGLTRYGVEVTF 133 (400)
T ss_pred CCccHHHHHHHHHHHhC--------CCcEEEEcCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHhhCCeEEEE
Confidence 45678999999999983 2468899999999999999999999999999999876543 34667888887
Q ss_pred eeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHc--CcEEEEcccccccccCCCCCCCc
Q 014603 161 FDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKL--GIMVIADEVYDHLAFGNTPFVPM 238 (422)
Q Consensus 161 ~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~--~~~li~D~~~~~~~~~~~~~~~~ 238 (422)
++. .|++++++.++++++++++++|+||||.+.+ +++|.++|+++ |+++|+|++|....+. .++
T Consensus 134 vd~-------~d~e~l~~~i~~~tklI~iesP~NPtG~v~d---l~~I~~la~~~~~~i~livDea~~~~~~~----~~l 199 (400)
T PRK06234 134 VDT-------SNLEEVRNALKANTKVVYLETPANPTLKVTD---IKAISNIAHENNKECLVFVDNTFCTPYIQ----RPL 199 (400)
T ss_pred ECC-------CCHHHHHHHhccCCeEEEEECCCCCCCCcCC---HHHHHHHHHhcCCCCEEEEECCCCchhcC----Cch
Confidence 764 2789999999889999999999999999964 78888888887 9999999999864332 122
Q ss_pred cccCCCCCeEEEecCccccCCCCcee-EEEEeeCCCCcccchhHHHHHHhhh---hhccCcchHHHHHHHHHHhhchHHH
Q 014603 239 GVFGSIVPVLTLGSISKRWIVPGWRL-GWLVTSDPNGILQDSGIVDSIKSFL---NISSDPATFIQGAVPQILEKTEEEF 314 (422)
Q Consensus 239 ~~~~~~~~~i~i~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~a~~~~l~~~~~~~ 314 (422)
..+. .+++.|+||.++++|.++ ||++++ ++++++++... ......++...+.+...|+.
T Consensus 200 -~~g~---Divv~S~sK~l~g~g~~~gG~v~~~--------~~~~~~l~~~~~~~~~g~~l~p~~a~l~~~~l~t----- 262 (400)
T PRK06234 200 -QLGA---DVVVHSATKYLNGHGDVIAGFVVGK--------EEFINQVKLFGIKDMTGSVIGPFEAFLIIRGMKT----- 262 (400)
T ss_pred -hhCC---cEEEeeccccccCCCCceeEEEEec--------HHHHHHHHHHHHHHhcCCCCCHHHHHHHHhccCc-----
Confidence 2222 389999999998888775 888875 35666665432 12335566666666555654
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC----------------CceEEEEecCcccccCCCCHHHHHHHHHHhcC
Q 014603 315 FSKITDILRETADICCDRLKEIPCITCPKKPE----------------GSMFVMVKLNYSLLEGINSDMEFALKLAKEES 378 (422)
Q Consensus 315 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~----------------~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g 378 (422)
+..+.++..++...+.+.|+++|.+..+..|. .|..+.++++.. ......+++.| +-.+
T Consensus 263 l~~r~~~~~~na~~~a~~L~~~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l~~~----~~~~~~f~~~l-~~~~ 337 (400)
T PRK06234 263 LQIRMEKHCKNAMKVAKFLESHPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKGG----VEEGKVVMNNV-KLAT 337 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEecCc----HHHHHHHHHhC-Ccce
Confidence 45566667788888888998876654333332 233555666421 00123333333 3233
Q ss_pred eEEecCCCCC----------------------C-CCeEEEEeccChHHHHHHHHHHHHHHHH
Q 014603 379 VIVLPGITVG----------------------L-KDWLRITFAVEPSALEDGLGRMKAFYDR 417 (422)
Q Consensus 379 i~v~~g~~~~----------------------~-~~~iRis~~~~~~~l~~~~~~l~~~~~~ 417 (422)
+.+.-|.... . ++.||+|++. |+.+.++..|+++++.
T Consensus 338 ~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGl--E~~~dl~~dl~~al~~ 397 (400)
T PRK06234 338 LAVSLGDAETLIQHPASMTHSPYTAEERKEAGISDGLVRLSVGL--EDVDDIIADLKQALDL 397 (400)
T ss_pred EeccCCCCCceecCCccCCCCCCCHHHHHhcCCCCCeEEEEeCC--CCHHHHHHHHHHHHHH
Confidence 3322222110 1 3689999997 3566666667666654
No 183
>PLN02242 methionine gamma-lyase
Probab=99.95 E-value=4e-25 Score=209.27 Aligned_cols=216 Identities=19% Similarity=0.200 Sum_probs=165.1
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHH-----hhCCCeEEE
Q 014603 86 TVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARA-----THSHLEVRH 160 (422)
Q Consensus 86 ~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~-----~~~g~~~~~ 160 (422)
.+...+|++.++++.+ .+.+++++||++|+..++.+++++||+|+++.|.|.++.... +..|++++.
T Consensus 75 ~Pt~~~LE~~lA~l~g--------~~~~l~~~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~ 146 (418)
T PLN02242 75 NPTVLNLGRQMAALEG--------TEAAYCTASGMSAISSVLLQLCSSGGHVVASNTLYGGTHALLAHFLPRKCNITTTF 146 (418)
T ss_pred ChhHHHHHHHHHHHhC--------CCeEEEEccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHhhhhccCceEEE
Confidence 4557899999999883 356789999999999999999999999999999998775544 236666665
Q ss_pred eeccCCCCcccCHHHHHHhhcC-CceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCcc
Q 014603 161 FDLLPAKGWEVDLDAVEALADE-NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMG 239 (422)
Q Consensus 161 ~~~~~~~~~~~d~~~l~~~~~~-~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~ 239 (422)
++. .|++.+++.+++ +++++++++|+||||.++ ++++|+++|+++|++||+|++|..+.+.. .
T Consensus 147 ~d~-------~d~e~l~~~i~~~~tklV~lesp~NPtG~v~---dl~~I~~la~~~gi~livDea~~~~~~~~------~ 210 (418)
T PLN02242 147 VDI-------TDLEAVKKAVVPGKTKVLYFESISNPTLTVA---DIPELARIAHEKGVTVVVDNTFAPMVLSP------A 210 (418)
T ss_pred cCC-------CCHHHHHHhcCcCCCEEEEEecCCCCCCccc---CHHHHHHHHHHhCCEEEEECCCCccCCCH------H
Confidence 542 378999999987 499999999999999985 68899999999999999999997654321 1
Q ss_pred ccCCCCCeEEEecCccccCCCCce-eEEEEeeCCCCcccchhHHHHHHhhhh---hccCcchHHHHHHHHHHhhchHHHH
Q 014603 240 VFGSIVPVLTLGSISKRWIVPGWR-LGWLVTSDPNGILQDSGIVDSIKSFLN---ISSDPATFIQGAVPQILEKTEEEFF 315 (422)
Q Consensus 240 ~~~~~~~~i~i~s~sK~~~~~G~r-~G~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~a~~~~l~~~~~~~~ 315 (422)
.++ ..+++.|+||.++++|.+ .||++++ +++++.+..... ...++....|.|...+... ..+
T Consensus 211 ~~g---~divv~S~SK~l~g~g~~~gG~iv~~--------~~li~~l~~~~~~~~~~~g~~~~~~~A~l~~~~l---~tl 276 (418)
T PLN02242 211 RLG---ADVVVHSISKFISGGADIIAGAVCGP--------AELVNSMMDLHHGALMLLGPTMNPKVAFELSERL---PHL 276 (418)
T ss_pred HcC---CcEEEEeCccccCCCCCceEEEEEcC--------HHHHHHHHHHhhhhhhccCCCCCHHHHHHHHcCC---CcH
Confidence 222 238899999999888987 5888875 457777765532 1234455566666555543 245
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCC
Q 014603 316 SKITDILRETADICCDRLKEIPCIT 340 (422)
Q Consensus 316 ~~~~~~~~~~~~~l~~~L~~~~~~~ 340 (422)
..+.++++++++.+.+.|+++ ++.
T Consensus 277 ~~r~~~~~~~a~~la~~L~~~-~~~ 300 (418)
T PLN02242 277 SLRMKEHCRRAMEYAKRMKEL-GLK 300 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHhC-CCE
Confidence 567778899999999999987 344
No 184
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.95 E-value=2.8e-25 Score=200.51 Aligned_cols=349 Identities=15% Similarity=0.139 Sum_probs=227.3
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCC----CCCCCCC--CCCCHHHHHHHHHHHhhcCCCCCCCCCEEEe
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSA----RFNCYSS--TVGILPARRAIADYLNRDLPYKLSPDDVYLT 116 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~----~~~~y~~--~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~ 116 (422)
.+...++|+.+..+ |.++.|.++|...+... ....|.. ..++++.|+.+|++++ .++++|+||
T Consensus 40 ~~~~~vyld~~at~-----p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklIn------Ad~~dIiFt 108 (428)
T KOG1549|consen 40 HGTRPVYLDNQATG-----PMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLIN------ADPSDIVFT 108 (428)
T ss_pred CCCccEEEecCcCC-----CCCHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHhC------CCCCcEEEe
Confidence 56788999999866 77899999998887652 2112332 3347889999999994 578889999
Q ss_pred cCHHHHHHHHHHHhc-CCCC----EEEecCCCccchHH---HHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEE
Q 014603 117 LGCTQAIEVILTVLA-RPGA----NILLPRPGFPYYEA---RATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALV 188 (422)
Q Consensus 117 ~g~~~a~~~~~~~l~-~~gd----~Vl~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~ 188 (422)
+|+|++++++++.+. ..+| .|++.+..|.+... ..+..|..++.+|+. +.+..|.+.+++.++++|+++.
T Consensus 109 s~ATEs~Nlvl~~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~--~~~~~d~~~~~~~i~~~T~lv~ 186 (428)
T KOG1549|consen 109 SGATESNNLVLKGVARFFGDKTKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVE--DSGLVDISKLREAIRSKTRLVS 186 (428)
T ss_pred CCchHHHHHHHHHhhccccccccceEEEecccCcchhHHHHHHHhcCeEEEEeccC--ccccccHHHHHHhcCCCceEEE
Confidence 999999999999873 3445 89999988877644 444568999999986 4456899999999999999999
Q ss_pred EeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEE
Q 014603 189 IINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLV 268 (422)
Q Consensus 189 i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~ 268 (422)
+.+.+|.+|+.+ ++++|+++|+++|+++++|.+|+. |+...++..++.| ++..|.+|+||++| +|+++
T Consensus 187 I~~Vnn~~gv~~---Pv~EI~~icr~~~v~v~~DaAQav----G~i~vDV~eln~D---~~s~s~HK~ygp~~--iGaLY 254 (428)
T KOG1549|consen 187 IMHVNNEIGVLQ---PVKEIVKICREEGVQVHVDAAQAV----GKIPVDVQELNAD---FLSISAHKIYGPPG--IGALY 254 (428)
T ss_pred EEecccCccccc---cHHHHHHHhCcCCcEEEeehhhhc----CCccccHHHcCch---heeeecccccCCCc--ceEEE
Confidence 999999999995 588888899999999999999987 7778888888887 88889999999999 89999
Q ss_pred eeC-CCCcccchhHHHHHHhhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCCCCCC
Q 014603 269 TSD-PNGILQDSGIVDSIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKE-IPCITCPKKPE 346 (422)
Q Consensus 269 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~ 346 (422)
++. ...+...|.+...........++...+.+....++.+.. ..+.......+++..+.+...+.. .+.+.....+.
T Consensus 255 vr~~~~~~~~~p~~~GGgq~r~~rsGT~~~~~~~~~gsA~e~~-~~~~~~~~~~~~~~~~~ll~~i~~~~~~~~~~G~~~ 333 (428)
T KOG1549|consen 255 VRRKRPRLRVEPPLSGGGQERGLRSGTVATPLAVGLGSAAEFV-NKEMAYDEAIIKRLSEKLLMGIGQSLPEVTLNGSGK 333 (428)
T ss_pred EccCCCcccccCcccCCccccccccCCcCchhhhhhHHHHHHH-HhhcchhHHHHHHHHHHHHHHHhhhCchhhccCCcc
Confidence 863 111111111111111111234566667777666666542 122222222333344444444432 33332111111
Q ss_pred C--ceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCC-------------CCCCCCeEEEEec--cChHHHHHHHH
Q 014603 347 G--SMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGI-------------TVGLKDWLRITFA--VEPSALEDGLG 409 (422)
Q Consensus 347 ~--g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~-------------~~~~~~~iRis~~--~~~~~l~~~~~ 409 (422)
. .....+.++ +..+..-..+. .....+.|.....-. .+-....+||+++ ++++|++++++
T Consensus 334 ~~~~~~~~~~~~--~~~g~~~~~~~-~~~~l~s~~a~~~~~~epsy~l~~~G~~~~~~~~~iRis~G~y~t~~di~~~~~ 410 (428)
T KOG1549|consen 334 SRYPGLVSLSFP--YVEGESLLMDL-KDVALSSGSACTSASLEPSYVLRAIGVDEDLAHSSIRISIGRYTTEEDIDYLVD 410 (428)
T ss_pred cccccceeeecc--cccCcchhhhh-hhhhhcccchhhcCCCCcchhhhhcCcchhhhcceeEEeeeeeCcHHHHHHHHH
Confidence 1 011112222 00000000000 001111111111100 0111578999998 78999999999
Q ss_pred HHHHHHHHhcc
Q 014603 410 RMKAFYDRHAK 420 (422)
Q Consensus 410 ~l~~~~~~~~~ 420 (422)
.+.+.+..++.
T Consensus 411 ~i~~~v~~~~~ 421 (428)
T KOG1549|consen 411 AIKKLVSLLRE 421 (428)
T ss_pred HHHHHHHhccc
Confidence 99999877654
No 185
>PRK07505 hypothetical protein; Provisional
Probab=99.95 E-value=1.7e-24 Score=206.39 Aligned_cols=330 Identities=15% Similarity=0.180 Sum_probs=205.8
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCC-CCCCC-----CCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEe
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSAR-FNCYS-----STVGILPARRAIADYLNRDLPYKLSPDDVYLT 116 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~y~-----~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~ 116 (422)
+|..++||...+ +.++..+|++.+++.+++.... ..... ......++++.+++++ +. ..+++
T Consensus 44 ~g~~~ld~~s~~---~lgl~~~p~v~~A~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~la~~~------~~---~~~~~ 111 (402)
T PRK07505 44 DGHTFVNFVSCS---YLGLDTHPAIIEGAVDALKRTGSLHLSSSRTRVRSQILKDLEEALSELF------GA---SVLTF 111 (402)
T ss_pred CCceEEEeecCC---ccCCCCCHHHHHHHHHHHHHhCCCCCCccchhhhhHHHHHHHHHHHHHh------CC---CEEEE
Confidence 588899997754 3444678999999999987521 11111 1223456677777766 22 45555
Q ss_pred cCHHHHHHHHHHHhc----CCC-CEEEecCCCccchHH---HHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEE
Q 014603 117 LGCTQAIEVILTVLA----RPG-ANILLPRPGFPYYEA---RATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALV 188 (422)
Q Consensus 117 ~g~~~a~~~~~~~l~----~~g-d~Vl~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~ 188 (422)
+++++|...++..+. .+| ..|++.+..||+... .....+.+++.++. .|++.+++.+++++++++
T Consensus 112 ~sG~~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~~~~~v~~~~~-------~d~~~l~~~~~~~~~~~v 184 (402)
T PRK07505 112 TSCSAAHLGILPLLASGHLTGGVPPHMVFDKNAHASLNILKGICADETEVETIDH-------NDLDALEDICKTNKTVAY 184 (402)
T ss_pred CChHHHHHHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhhcCCeEEEeCC-------CCHHHHHHHHhcCCCEEE
Confidence 566778877765432 223 246666655554321 11123445666553 378899988877788999
Q ss_pred EeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccC--CCCCCCccccC--CCCCeEEEecCccccCCCCcee
Q 014603 189 IINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFG--NTPFVPMGVFG--SIVPVLTLGSISKRWIVPGWRL 264 (422)
Q Consensus 189 i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~--~~~~~~~~~~~--~~~~~i~i~s~sK~~~~~G~r~ 264 (422)
+++|+||+|.+++ +++|.++|+++|+++|+||+|+...++ |... ....++ ..+++++++|+||.|+++|
T Consensus 185 l~~p~~~~G~~~~---~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~-~~~~~~~~~~d~~i~~~s~sK~~~~~G--- 257 (402)
T PRK07505 185 VADGVYSMGGIAP---VKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGY-VRSELDYRLNERTIIAASLGKAFGASG--- 257 (402)
T ss_pred EEecccccCCcCC---HHHHHHHHHHcCCEEEEECcccccCcCCCCCch-HHHHcCCCCCCCeEEEEechhhhhccC---
Confidence 9999999999976 677788899999999999998654332 3221 112222 2356799999999998777
Q ss_pred EEEEeeCCCCcccchhHHHHHHhhhhh---ccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCC
Q 014603 265 GWLVTSDPNGILQDSGIVDSIKSFLNI---SSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITC 341 (422)
Q Consensus 265 G~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 341 (422)
||++.++ +++.+.+...... .+++++++++++.++++...++++.+..++++++.+.+...+...
T Consensus 258 g~~~~~~-------~~~~~~~~~~~~~~t~~~~~~~~a~aa~~a~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~----- 325 (402)
T PRK07505 258 GVIMLGD-------AEQIELILRYAGPLAFSQSLNVAALGAILASAEIHLSEELDQLQQKLQNNIALFDSLIPTE----- 325 (402)
T ss_pred eEEEeCC-------HHHHHHHHHhCCCceeCCCCCHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHhc-----
Confidence 8876543 4677777654322 124455777777777763333444455555555554443322111
Q ss_pred CCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC---CCeEEEEec--cChHHHHHHHHHHHHHHH
Q 014603 342 PKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL---KDWLRITFA--VEPSALEDGLGRMKAFYD 416 (422)
Q Consensus 342 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~---~~~iRis~~--~~~~~l~~~~~~l~~~~~ 416 (422)
. .....++.++.++.. ....++...++ ++||.+.++..+.. .+++|++++ ++++++++++++|+++++
T Consensus 326 ~-~g~~~~i~~~~~~~~-----~~~~~~~~~l~-~~Gi~v~~~~~p~~~~~~~~lRi~~~~~~t~eei~~~~~~l~~~l~ 398 (402)
T PRK07505 326 Q-SGSFLPIRLIYIGDE-----DTAIKAAKQLL-DRGFYTSPVFFPVVAKGRAGLRIMFRASHTNDEIKRLCSLLKEILD 398 (402)
T ss_pred C-CCCCCCEEEEEeCCH-----HHHHHHHHHHH-HCCCeEeeecCCCCCCCCceEEEecCccCCHHHHHHHHHHHHHHHH
Confidence 0 111112223333211 02455666664 66999998754432 368999998 799999999999999876
Q ss_pred H
Q 014603 417 R 417 (422)
Q Consensus 417 ~ 417 (422)
+
T Consensus 399 ~ 399 (402)
T PRK07505 399 E 399 (402)
T ss_pred h
Confidence 5
No 186
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.95 E-value=2.5e-24 Score=195.53 Aligned_cols=330 Identities=19% Similarity=0.187 Sum_probs=245.4
Q ss_pred CCCcHHHHHHHHHHhhCCCCCCCCC--CCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEE
Q 014603 61 FRTASVAVDAIVHSVRSARFNCYSS--TVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANIL 138 (422)
Q Consensus 61 ~~~~~~v~~a~~~~~~~~~~~~y~~--~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl 138 (422)
.+.++.|+++|...... +..+ ...+.++.+.+...++. . +.+-++++++||.++++++.++++|||+||
T Consensus 14 ~~v~~~V~~am~~~~~~----h~s~~F~~~~~~~~~~L~~v~~t----~-~~~~~ll~gsGt~amEAav~sl~~pgdkVL 84 (383)
T COG0075 14 VPVPPRVLLAMARPMVG----HRSPDFVGIMKEVLEKLRKVFGT----E-NGDVVLLSGSGTLAMEAAVASLVEPGDKVL 84 (383)
T ss_pred CCCCHHHHHHhcCCCCC----CCCHHHHHHHHHHHHHHHHHhcC----C-CCcEEEEcCCcHHHHHHHHHhccCCCCeEE
Confidence 36789999998886543 2222 12244555555555521 1 235667889999999999999999999999
Q ss_pred ecCCCccc--hHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC--CceEEEEeCCCCCcccccCHHHHHHHHHHHHH
Q 014603 139 LPRPGFPY--YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE--NTVALVIINPGNPCGNVYTYQHLQKIAETAKK 214 (422)
Q Consensus 139 ~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~--~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~ 214 (422)
+...+.++ |.++++.+|.+++.+...+ +-.+|++++++.+++ +.+++.+++...+||+. .++++|+++|++
T Consensus 85 v~~nG~FG~R~~~ia~~~g~~v~~~~~~w--g~~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvl---npl~~I~~~~k~ 159 (383)
T COG0075 85 VVVNGKFGERFAEIAERYGAEVVVLEVEW--GEAVDPEEVEEALDKDPDIKAVAVVHNETSTGVL---NPLKEIAKAAKE 159 (383)
T ss_pred EEeCChHHHHHHHHHHHhCCceEEEeCCC--CCCCCHHHHHHHHhcCCCccEEEEEeccCccccc---CcHHHHHHHHHH
Confidence 99888865 5789999999999887653 445899999999974 46788899999999999 679999999999
Q ss_pred cCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCC-CCceeEEEEeeCCC-----------CcccchhHH
Q 014603 215 LGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIV-PGWRLGWLVTSDPN-----------GILQDSGIV 282 (422)
Q Consensus 215 ~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~-~G~r~G~~~~~~~~-----------~~~~~~~~~ 282 (422)
||.++|+|.+.+. |.....+..++.| +++.+..|.+++ || +|.+..++.. ..++-..+.
T Consensus 160 ~g~l~iVDaVsS~----Gg~~~~vd~wgiD---v~itgSQK~l~~PPG--la~v~~S~~a~e~~~~~~~~~~ylDL~~~~ 230 (383)
T COG0075 160 HGALLIVDAVSSL----GGEPLKVDEWGID---VAITGSQKALGAPPG--LAFVAVSERALEAIEERKHPSFYLDLKKWL 230 (383)
T ss_pred cCCEEEEEecccC----CCcccchhhcCcc---EEEecCchhccCCCc--cceeEECHHHHHHHhcCCCCceeecHHHHH
Confidence 9999999999885 3334456666666 888899999865 66 6777775321 122112233
Q ss_pred HHHHhhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC--CceEEEEecCcccc
Q 014603 283 DSIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPE--GSMFVMVKLNYSLL 360 (422)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~--~g~~~~~~~~~~~~ 360 (422)
+.+++...+.++++....+++.++|+...+++++.+.++++++.+.+++.++.+ |+..+..+. ......+..|.+
T Consensus 231 ~~~~~~~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~al-Gl~~~~~~~~~s~tvta~~~P~g-- 307 (383)
T COG0075 231 KYMEKKGSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEAL-GLELFADPERRSPTVTAIKVPEG-- 307 (383)
T ss_pred HHHhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCccccCcccCCCceEEEECCCC--
Confidence 333332334568888899999999998888889999999999999999999998 777443221 122333445543
Q ss_pred cCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHHHHHHHHHhc
Q 014603 361 EGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGRMKAFYDRHA 419 (422)
Q Consensus 361 ~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~l~~~~~~~~ 419 (422)
. ++.+....+++++|+.+.+|........+||+.. ...+++..++.+|+.+++++.
T Consensus 308 --~-~~~~~~~~~~~~~g~~i~gg~~~l~gkifRIGhMG~~~~~dv~~~l~ale~~L~~~g 365 (383)
T COG0075 308 --V-DDKKVRRALLKEYGVEIAGGQGPLKGKIFRIGHMGNVRPEDVLAALAALEAALRELG 365 (383)
T ss_pred --C-CcHHHHHHHHHhCCEEecccccccCccEEEEecCccCCHHHHHHHHHHHHHHHHHcC
Confidence 2 3444555778888999999887776789999986 688999999999999998863
No 187
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.95 E-value=1.2e-25 Score=211.22 Aligned_cols=310 Identities=14% Similarity=0.115 Sum_probs=214.9
Q ss_pred CCcHHHHHHHHHHhhCCCCCCC--CCC------CCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhc--
Q 014603 62 RTASVAVDAIVHSVRSARFNCY--SST------VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLA-- 131 (422)
Q Consensus 62 ~~~~~v~~a~~~~~~~~~~~~y--~~~------~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~-- 131 (422)
++++.+.+++.+.+.....+.. ... ..+.++|+.+++++ +.++++|++++|++++++.++.++.
T Consensus 9 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~v~~~~g~t~a~~~~l~~l~~~ 82 (353)
T TIGR03235 9 PIDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEAL------GADTEEVIFTSGATESNNLAILGLARA 82 (353)
T ss_pred CCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCCHHHHHHHHHHHHHHh
Confidence 6778999999888753211111 110 12467888888888 4577899999999999999998875
Q ss_pred --CCC-CEEEecCCCccchH---HHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHH
Q 014603 132 --RPG-ANILLPRPGFPYYE---ARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHL 205 (422)
Q Consensus 132 --~~g-d~Vl~~~~~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l 205 (422)
.+| +.|++...+|+.+. ..++..|.+++.++.+. ++.+|++.+++.++++++++++++++||||.+++ +
T Consensus 83 ~~~~g~~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~--~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~---~ 157 (353)
T TIGR03235 83 GEQKGKKHIITSAIEHPAVLEPIRALERNGFTVTYLPVDE--SGRIDVDELADAIRPDTLLVSIMHVNNETGSIQP---I 157 (353)
T ss_pred cccCCCCeeeEcccccHHHHHHHHHHHhcCCEEEEEccCC--CCcCCHHHHHHhCCCCCEEEEEEcccCCceeccC---H
Confidence 355 78888887776553 33445688898888753 4568999999999888999999999999999965 7
Q ss_pred HHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHH
Q 014603 206 QKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSI 285 (422)
Q Consensus 206 ~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~ 285 (422)
++|.++|+++|+++|+|++++. |....++...+.| +++.|++|+++.+| +|++++++..... ..+
T Consensus 158 ~~I~~l~~~~~~~~ivD~a~~~----g~~~~~~~~~~~D---~~~~s~~K~~gp~g--~g~l~~~~~~~~~------~~~ 222 (353)
T TIGR03235 158 REIAEVLEAHEAFFHVDAAQVV----GKITVDLSADRID---LISCSGHKIYGPKG--IGALVIRKRGKPK------APL 222 (353)
T ss_pred HHHHHHHHHcCCEEEEEchhhc----CCccccccccCCC---EEEeehhhcCCCCc--eEEEEEccCcccc------ccc
Confidence 8888899999999999999886 3323334333333 77889999876566 7999887431100 001
Q ss_pred Hh--------hhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCC--ceEEEEec
Q 014603 286 KS--------FLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEG--SMFVMVKL 355 (422)
Q Consensus 286 ~~--------~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~--g~~~~~~~ 355 (422)
.. .....++++.....++.++++.. ....++..++++++++.+++.|++ +++++...+.. ..+..+.+
T Consensus 223 ~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~-~~~~~~~~~~~~~l~~~l~~~l~~-~g~~~~~~~~~~~~~i~~~~~ 300 (353)
T TIGR03235 223 KPIMFGGGQERGLRPGTLPVHLIVGMGEAAEIA-RRNAQAWEVKLRAMRNQLRDALQT-LGVKLNGDPAETIPHILNFSI 300 (353)
T ss_pred CceeeCCCCcCccccCCCChHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHhcc-CCeEEeCCcccccCCEEEEEe
Confidence 11 01123466667777777777753 346778889999999999999988 58774322321 12333333
Q ss_pred CcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCC----CeEEEEeccChHHHHHH
Q 014603 356 NYSLLEGINSDMEFALKLAKEESVIVLPGITVGLK----DWLRITFAVEPSALEDG 407 (422)
Q Consensus 356 ~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~----~~iRis~~~~~~~l~~~ 407 (422)
+. .+..++...| ++ +|.+.+|..|+.. .++|.+++.+++++..+
T Consensus 301 ~~------~~~~~v~~~L-~~-~i~v~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~ 348 (353)
T TIGR03235 301 DG------VNSEALIVNL-RA-DAAVSTGSACSSSKYEPSHVLQAMGLDTDRARGA 348 (353)
T ss_pred CC------cCHHHHHHHH-hC-CeEEEchhhcCCCCCCCCHHHHHcCCCHHHhCcc
Confidence 32 1455665555 55 8999999998653 36888888766655443
No 188
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.95 E-value=8.3e-25 Score=211.64 Aligned_cols=326 Identities=20% Similarity=0.203 Sum_probs=214.1
Q ss_pred CceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCC--CCCHHHHHHHHH---HHhhcCCCCCCCCCEEEecCHH
Q 014603 46 PLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSST--VGILPARRAIAD---YLNRDLPYKLSPDDVYLTLGCT 120 (422)
Q Consensus 46 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~--~g~~~lr~~ia~---~l~~~~~~~~~~~~i~~~~g~~ 120 (422)
..++|+.|.+. +..|..+.+++...- ....|.+. .....+++.+++ ++.+.+| ++.+++++++|++
T Consensus 69 ~~~~lg~g~~~----~~~p~~~~~~~~~~~---~~~~y~~~~~~~~~g~~~~~~e~~~~la~l~g--~~~~~v~~~~g~t 139 (447)
T PRK00451 69 YPSFLGAGAYD----HYIPAVVDHIISRSE---FYTAYTPYQPEISQGTLQAIFEYQTMICELTG--MDVANASMYDGAT 139 (447)
T ss_pred CcccCcccccC----CcCcHHHHHHHhchh---HHHhcCCCCCccchHHHHHHHHHHHHHHHHhC--CCcceEEecCcHH
Confidence 56788888755 455556555443321 11234331 112334444442 2244443 4566899999999
Q ss_pred HHHHHHHHHhc-CCCCEEEecCCCccchHHHHhh----CCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCC
Q 014603 121 QAIEVILTVLA-RPGANILLPRPGFPYYEARATH----SHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNP 195 (422)
Q Consensus 121 ~a~~~~~~~l~-~~gd~Vl~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~np 195 (422)
++++.++.++. .+||+|+++++.|+.+...+.. .|.+++.++.++ + .+|++.+++.++++++++++++| |+
T Consensus 140 ~~~~~~~~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~--~-~~d~~~l~~~i~~~t~~v~l~~p-n~ 215 (447)
T PRK00451 140 ALAEAALMAVRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYED--G-VTDLEALEAAVDDDTAAVVVQYP-NF 215 (447)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCCC--C-CCCHHHHHHhcCCCeEEEEEECC-CC
Confidence 99999988874 7899999999999887766543 688999988754 3 68999999999889999999999 89
Q ss_pred cccccCHHHHHHHHHHHHHcCcEEEE--cccccccccCCCCCCCccccCCCCCeEEEe---cCccccCCCCceeEEEEee
Q 014603 196 CGNVYTYQHLQKIAETAKKLGIMVIA--DEVYDHLAFGNTPFVPMGVFGSIVPVLTLG---SISKRWIVPGWRLGWLVTS 270 (422)
Q Consensus 196 tG~~~~~~~l~~i~~~~~~~~~~li~--D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~---s~sK~~~~~G~r~G~~~~~ 270 (422)
||.+ +++++|.++|+++|+++++ |.+..+ ... ....++.| ++++ +++|.+.+.|+++||++++
T Consensus 216 tG~v---~~l~~I~~~a~~~~~~~iv~~d~~~~g-----~~~-~~~~~~~D---~~~~s~~k~~~~~~~~Gpg~G~l~~~ 283 (447)
T PRK00451 216 FGVI---EDLEEIAEIAHAGGALFIVGVDPVSLG-----LLK-PPGEYGAD---IVVGEGQPLGIPLSFGGPYLGFFATR 283 (447)
T ss_pred CCee---CCHHHHHHHHHHCCCEEEEEcChHHhc-----cCC-CcccCCCC---EEEECCCcCCCCCCCCCCCchHHHhh
Confidence 9999 5688899999999999988 544321 111 11233333 5555 5666667778889999875
Q ss_pred CCCCcccchhHHHHHH----------------------------hhhhhccCc-chHHH-HHHHHHHhhchHHHHHHHHH
Q 014603 271 DPNGILQDSGIVDSIK----------------------------SFLNISSDP-ATFIQ-GAVPQILEKTEEEFFSKITD 320 (422)
Q Consensus 271 ~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~-~~~~~-~a~~~~l~~~~~~~~~~~~~ 320 (422)
+++.+.+. ........+ +...+ .++..+++...+.++++..+
T Consensus 284 --------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~~~~g~~~~~~ 355 (447)
T PRK00451 284 --------KKLVRQMPGRLVGETVDADGKRGFVLTLQAREQHIRREKATSNICTNQALNALAAAIYMSLLGPEGLRELAE 355 (447)
T ss_pred --------HHHHhhCCCCEeeeecccCCCeeeEeeccccccccccccccccccccHHHHHHHHHHHHHHHCHHHHHHHHH
Confidence 34444421 111111111 11122 23333344334577899999
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCCCceEEE--EecCcccccCCCCHHHHHHHHHHhcCeEE-ecCCCCC--CCCeEEE
Q 014603 321 ILRETADICCDRLKEIPCITCPKKPEGSMFVM--VKLNYSLLEGINSDMEFALKLAKEESVIV-LPGITVG--LKDWLRI 395 (422)
Q Consensus 321 ~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~gi~v-~~g~~~~--~~~~iRi 395 (422)
++.++++++.+.|++++++.+. .+++|.+ +.++. +..++.++|.++ ||.+ .++..+. ..+++|+
T Consensus 356 ~~~~~~~~l~~~L~~~~g~~~~---~~~~~~~~~v~~~~-------~~~~~~~~L~~~-gi~~~~~~~~~~~~~~~~~rv 424 (447)
T PRK00451 356 QNHQKAHYLAERLAEIGGVELF---DGPFFNEFVVRLPK-------PAEEVNEALLEK-GILGGYDLGRYYPELGNHLLV 424 (447)
T ss_pred HHHHHHHHHHHHHhhcCCEEec---CCCeEEEEEEecCC-------CHHHHHHHHHhc-CCCCCcccccccCCcCCEEEE
Confidence 9999999999999999887732 3334433 34321 467787877654 6552 3444433 2578999
Q ss_pred Eec--cChHHHHHHHHHHHHHH
Q 014603 396 TFA--VEPSALEDGLGRMKAFY 415 (422)
Q Consensus 396 s~~--~~~~~l~~~~~~l~~~~ 415 (422)
|++ +++++++++++.|++++
T Consensus 425 s~~~~~t~e~i~~l~~~L~~~~ 446 (447)
T PRK00451 425 CVTEKRTKEDIDALVAALGEVL 446 (447)
T ss_pred ecCCCCCHHHHHHHHHHHHHHh
Confidence 997 78999999999998754
No 189
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.95 E-value=3.4e-24 Score=202.80 Aligned_cols=347 Identities=15% Similarity=0.132 Sum_probs=229.6
Q ss_pred cCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHH
Q 014603 42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ 121 (422)
Q Consensus 42 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 121 (422)
.+|+.+|||..|......+ ..+|.+.+++.+++.+.. .+... ...+.+..+++.|....+ ..+.++++++|++
T Consensus 37 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~q~~~~~--~~~~~-~~~~~~~~la~~L~~~~~---~~~~v~f~~sGse 109 (408)
T PRK04612 37 DQGREYLDLAAGIAVCGLG-HNDPDLVAALTEQAGKLW--HTSNV-FYSAPPLKLAEELVTASR---FAEKVFLCNSGTE 109 (408)
T ss_pred CCCCEEEEcCccHhhccCC-CCCHHHHHHHHHHHHhcc--ccccc-cCCHHHHHHHHHHHhhCC---CCCEEEEcCchHH
Confidence 4689999999886553333 457899999999987532 22221 123444556666654322 1268999999999
Q ss_pred HHHHHHHHhcC--------C-CCEEEecCCCccchHHHHhhC-CCeEEE---eeccCC---CCcccCHHHHHHhhcCCce
Q 014603 122 AIEVILTVLAR--------P-GANILLPRPGFPYYEARATHS-HLEVRH---FDLLPA---KGWEVDLDAVEALADENTV 185 (422)
Q Consensus 122 a~~~~~~~l~~--------~-gd~Vl~~~~~~~~~~~~~~~~-g~~~~~---~~~~~~---~~~~~d~~~l~~~~~~~~~ 185 (422)
|++.+++.... + ..+|+....+||+....+... +..... .+..+. -.+ .|++.+++.+.++..
T Consensus 110 A~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~-~d~~~l~~~~~~~~~ 188 (408)
T PRK04612 110 ANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDF-NDVEALEAAMAGGDV 188 (408)
T ss_pred HHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCC-CCHHHHHHhhCCCCE
Confidence 99999876431 1 247999999999875544332 211111 111100 011 277888888876778
Q ss_pred EEEEeCCCCCcccccC--HHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCce
Q 014603 186 ALVIINPGNPCGNVYT--YQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWR 263 (422)
Q Consensus 186 ~i~i~~p~nptG~~~~--~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r 263 (422)
++++..|.+++|.+++ .+.+++|.++|++||+++|+||+|.++.++|... .... .+....+.+++|.++ +|+|
T Consensus 189 aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~-a~~~---~~~~pdi~t~~K~l~-~G~p 263 (408)
T PRK04612 189 AAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGTLF-AHWQ---EQVTPDIVTLAKALG-GGFP 263 (408)
T ss_pred EEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCchh-hhhh---cCCCCCEEEEcchhc-CCCc
Confidence 8899999877775544 6789999999999999999999999887766422 1111 122355778899975 7899
Q ss_pred eEEEEeeCCCCcccchhHHHHHHhhh-hhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcC----CC
Q 014603 264 LGWLVTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEI----PC 338 (422)
Q Consensus 264 ~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~ 338 (422)
+|+++++ +++.+.+.... ..+.+.+++.++++.++|+...+ ++..++++++.+++.+.|+++ +.
T Consensus 264 iga~~~~--------~~~~~~~~~~~~~~t~~~~p~~~aaa~a~L~~~~~---~~l~~~~~~~g~~l~~~l~~l~~~~~~ 332 (408)
T PRK04612 264 IGAMLAG--------PKVAETMQFGAHGTTFGGNPLAAAVARVALRKLAS---PQIAANVARQSAALRAGLEALNAEFGV 332 (408)
T ss_pred eEEEEEC--------HHHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 9999986 35666665432 23456789999999999986432 244555666666666666553 22
Q ss_pred CCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHHHHHHHH
Q 014603 339 ITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGRMKAFYD 416 (422)
Q Consensus 339 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~l~~~~~ 416 (422)
+. . ...-|.++.+.+.... .....++... +.++|+.+.+.. .+.+|+.++ .+++++++++++|++++.
T Consensus 333 i~-~-vrg~Gl~~~i~~~~~~---~~~a~~i~~~-l~~~Gvlv~~~g----~~~lRl~Ppl~it~eeid~~l~~l~~~l~ 402 (408)
T PRK04612 333 FA-Q-VRGRGLMLGAVLAPAH---AGQAGAILDL-AAEHGLLLLQAG----PDVLRFVPALNLTDAELADGLARLRLALA 402 (408)
T ss_pred ee-e-eeccceEEEEEecCch---hhHHHHHHHH-HHHCCeEEeeCC----CCEEEEcCCccCCHHHHHHHHHHHHHHHH
Confidence 22 1 2233666666664210 0023344444 567799997742 478999987 789999999999999999
Q ss_pred HhcccC
Q 014603 417 RHAKKQ 422 (422)
Q Consensus 417 ~~~~~~ 422 (422)
++.+|+
T Consensus 403 ~~~~~~ 408 (408)
T PRK04612 403 DYVAQR 408 (408)
T ss_pred HHhhcC
Confidence 887664
No 190
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.94 E-value=2.3e-24 Score=206.77 Aligned_cols=335 Identities=15% Similarity=0.117 Sum_probs=215.0
Q ss_pred CCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCC------CCCCCHHHHH----HHHHHHhhcCCCCCCCCCE
Q 014603 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYS------STVGILPARR----AIADYLNRDLPYKLSPDDV 113 (422)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~------~~~g~~~lr~----~ia~~l~~~~~~~~~~~~i 113 (422)
....|+|..+. + ++++.+.+++...+.......++ .......+++ .+++++ +.+...|
T Consensus 24 ~~~~~~l~~~~-----n-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~------g~~~~~i 91 (416)
T PRK00011 24 QEEHIELIASE-----N-FVSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELF------GAEYANV 91 (416)
T ss_pred HhcCeeeeccc-----C-cCCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHHHHh------CCCceee
Confidence 36678888776 2 36789999987765321111111 1111233333 455555 3344456
Q ss_pred EEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHH-----HHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC-CceEE
Q 014603 114 YLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEA-----RATHSHLEVRHFDLLPAKGWEVDLDAVEALADE-NTVAL 187 (422)
Q Consensus 114 ~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i 187 (422)
+++ +|++++..++.+++++||+|+++.|+|.++.. .....|.+++.+++++ +++.+|++++++.+++ +++++
T Consensus 92 ~~~-sgt~al~~~l~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~k~v 169 (416)
T PRK00011 92 QPH-SGSQANAAVYFALLKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDE-ETGLIDYDEVEKLALEHKPKLI 169 (416)
T ss_pred ecC-CchHHHHHHHHHhcCCCCEEEEeccccCCccccccccccccceeeEeecCcCc-ccCCcCHHHHHHHHHhcCCCEE
Confidence 555 45789999999999999999999999975421 1123356677777643 3467999999998864 68888
Q ss_pred EEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccc-cccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEE
Q 014603 188 VIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDH-LAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGW 266 (422)
Q Consensus 188 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~-~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~ 266 (422)
++++++++ .. .++++|.++|+++|+++|+|++|.. ..+.|.....+. .. .++++|+||++ +|+|.||
T Consensus 170 ~~~~~~~~--~~---~~~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~--~~---di~~~S~~K~l--~g~~gg~ 237 (416)
T PRK00011 170 IAGASAYS--RP---IDFKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVP--HA---DVVTTTTHKTL--RGPRGGL 237 (416)
T ss_pred EECCCcCC--Cc---cCHHHHHHHHHHcCCEEEEECcchhcccccCccCCCCC--CC---cEEEecCCcCC--CCCCceE
Confidence 87765543 33 3588999999999999999999863 222222222222 12 27799999975 6788899
Q ss_pred EEeeCCCCcccchhHHHHHHhhhhh--ccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC
Q 014603 267 LVTSDPNGILQDSGIVDSIKSFLNI--SSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKK 344 (422)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 344 (422)
+++++ +++.+++...... .+++....+.++..++......++++..++++++++.+.+.|++. ++.+...
T Consensus 238 i~~~~-------~~~~~~l~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~ 309 (416)
T PRK00011 238 ILTND-------EELAKKINSAVFPGIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAER-GFRVVSG 309 (416)
T ss_pred EEeCC-------HHHHHHHHHHhCccccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC-CCeeeec
Confidence 99863 4677777655432 122333334443333333223457888899999999999999987 6763211
Q ss_pred CCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCC-C-----CCCCeEEEEe------ccChHHHHHHHHHHH
Q 014603 345 PEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGIT-V-----GLKDWLRITF------AVEPSALEDGLGRMK 412 (422)
Q Consensus 345 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~-~-----~~~~~iRis~------~~~~~~l~~~~~~l~ 412 (422)
...++++|+.++... .+..++.. .++++||.+..+.. + ..+..+|++. +.++++++.+++.|+
T Consensus 310 ~~~~~~~~i~~~~~~----~~~~~~~~-~L~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~ 384 (416)
T PRK00011 310 GTDNHLVLVDLRSKG----LTGKEAEA-ALEEANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKEAEMKEIAELIA 384 (416)
T ss_pred CCCCeEEEEeCcccC----CCHHHHHH-HHHHcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCHHHHHHHHHHHH
Confidence 223478888875321 13445544 45778999974321 1 1245799965 246899999999999
Q ss_pred HHHHH
Q 014603 413 AFYDR 417 (422)
Q Consensus 413 ~~~~~ 417 (422)
+++..
T Consensus 385 ~~~~~ 389 (416)
T PRK00011 385 DVLDN 389 (416)
T ss_pred HHHhc
Confidence 88765
No 191
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.94 E-value=1.2e-24 Score=207.67 Aligned_cols=353 Identities=19% Similarity=0.147 Sum_probs=216.7
Q ss_pred cCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHH
Q 014603 42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ 121 (422)
Q Consensus 42 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 121 (422)
.+|..+|||..|......+ ..+|++.+++.+++.+.....+.. ...+.+..+++.|.+..+ ....+.++|+++|++
T Consensus 30 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~a~~~ql~~~~~~~~~~--~~~~~~~~la~~l~~~~p-~~~~~~v~f~~sGse 105 (420)
T TIGR00700 30 VDGNRLIDFASGIAVLNIG-HSHPRVVDAVRTQVAEFTHTCFMV--TPYEGYVALAEKLNRIAP-GSGPKKSVFFNSGAE 105 (420)
T ss_pred CCCCEEEECccCHHhccCC-CCCHHHHHHHHHHHHhccCccccc--cCChHHHHHHHHHHHhCC-CCCCCEEEEeCCcHH
Confidence 3689999999887554333 357899999999997643222211 112233344554443221 112368999999999
Q ss_pred HHHHHHHHhc--CCCCEEEecCCCccchHHHHhhC-CC-------------eEEEeeccCC---------CCcccCHHHH
Q 014603 122 AIEVILTVLA--RPGANILLPRPGFPYYEARATHS-HL-------------EVRHFDLLPA---------KGWEVDLDAV 176 (422)
Q Consensus 122 a~~~~~~~l~--~~gd~Vl~~~~~~~~~~~~~~~~-g~-------------~~~~~~~~~~---------~~~~~d~~~l 176 (422)
|++.+++... ....+|+....+||++...+... +. ++..++.... ..+.-+++.+
T Consensus 106 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (420)
T TIGR00700 106 AVENAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAA 185 (420)
T ss_pred HHHHHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhHHHHHHHH
Confidence 9999987542 22367999999999875544422 10 1111221100 0000124456
Q ss_pred HHhhc----CCceEEEEeCC-CCCccccc-CHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEE
Q 014603 177 EALAD----ENTVALVIINP-GNPCGNVY-TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTL 250 (422)
Q Consensus 177 ~~~~~----~~~~~i~i~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i 250 (422)
++.+. ++..+.+|..| +..+|..+ +.+.+++|.++|++||+++|+||+|.++.++|.. ..+...+..++ +
T Consensus 186 ~~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g~~-~a~~~~~~~pD---i 261 (420)
T TIGR00700 186 RAIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTGAM-FACEHEGPEPD---L 261 (420)
T ss_pred HHHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccchh-HHHhhcCCCCC---E
Confidence 65542 34556667777 55677755 5556999999999999999999999998877642 22222332222 3
Q ss_pred ecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhh-hhccCcchHHHHHHHHHHhhchH-HHHHHHHHHHHHHHHH
Q 014603 251 GSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQGAVPQILEKTEE-EFFSKITDILRETADI 328 (422)
Q Consensus 251 ~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~ 328 (422)
.++||.++ +|+|+||++++ +++++.+.... ..+.+.++++++++.++|+...+ ...+...+.-+..++.
T Consensus 262 ~~lsK~l~-~G~pig~v~~~--------~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~ 332 (420)
T TIGR00700 262 ITTAKSLA-DGLPLSGVTGR--------AEIMDAPAPGGLGGTYAGNPLACAAALAVLAIIESEGLIERARQIGRLVTDR 332 (420)
T ss_pred EEeecccc-CCcceEEEEec--------HHHHhhcCCCCcCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 45899976 89999999986 46777665332 34557789999999888875332 2223222222333333
Q ss_pred HHHHhhcCCCCCCCCCCCCceEEEEecCcccccCC--CCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHH
Q 014603 329 CCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGI--NSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSAL 404 (422)
Q Consensus 329 l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l 404 (422)
+.+..+.+|.+. ...+. |.++++.+........ .....+... +.++||.+.|+..|+ +++|++++ .++++|
T Consensus 333 L~~l~~~~~~~~-~vrg~-G~~~~i~~~~~~~~~~~~~~~~~l~~~-~~~~Gv~i~p~~~f~--~~lRl~p~l~~~~~~l 407 (420)
T TIGR00700 333 LTTLKAVDPRIG-DVRGL-GAMIAVELVDPGTTEPDAGLAERIATA-AHAAGLLLLTCGMFG--NIIRFLPPLTIGDELL 407 (420)
T ss_pred HHHHHhhCCCEE-Eeecc-ceEEEEEEecCCCCCccHHHHHHHHHH-HHHCCeEEeccCCCC--CEEEEECCCCcCHHHH
Confidence 333333444443 22344 7788887732100000 012233333 357799999987664 79999986 689999
Q ss_pred HHHHHHHHHHHH
Q 014603 405 EDGLGRMKAFYD 416 (422)
Q Consensus 405 ~~~~~~l~~~~~ 416 (422)
++++++|.+++.
T Consensus 408 ~~~~~~l~~~l~ 419 (420)
T TIGR00700 408 SEGLDILCAILA 419 (420)
T ss_pred HHHHHHHHHHhh
Confidence 999999999874
No 192
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.94 E-value=2.5e-24 Score=203.21 Aligned_cols=215 Identities=20% Similarity=0.236 Sum_probs=162.2
Q ss_pred CCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccc----hHHHHhhCCCeEEEeec
Q 014603 88 GILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPY----YEARATHSHLEVRHFDL 163 (422)
Q Consensus 88 g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~----~~~~~~~~g~~~~~~~~ 163 (422)
...+++++++++.+ . +..+++++|++++..++.+++++||+|+++.|.|.+ +...+...|..++.++.
T Consensus 61 ~~~~Le~~lA~l~g------~--~~~v~~~sG~~Ai~~~l~all~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v~~ 132 (405)
T PRK08776 61 TRDLLGEALAELEG------G--AGGVITATGMGAINLVLNALLQPGDTLVVPHDAYGGSWRLFNALAKKGHFALITADL 132 (405)
T ss_pred HHHHHHHHHHHHhC------C--CceEEEcCHHHHHHHHHHHHhCCCCEEEEccCCchHHHHHHHHHHHhcCcEEEEECC
Confidence 35678888888762 2 234566667899999999999999999999999986 34445556767666643
Q ss_pred cCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCC
Q 014603 164 LPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS 243 (422)
Q Consensus 164 ~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~ 243 (422)
.|++.+++.++++++++++++|+||||.+ .++++|+++|+++|+++|+|++|.... ...++ .++.
T Consensus 133 -------~d~~~l~~~i~~~tklV~l~~P~NPtG~v---~dl~~I~~la~~~gi~vIvD~a~a~~~----~~~pl-~~ga 197 (405)
T PRK08776 133 -------TDPRSLADALAQSPKLVLIETPSNPLLRI---TDLRFVIEAAHKVGALTVVDNTFLSPA----LQKPL-EFGA 197 (405)
T ss_pred -------CCHHHHHHhcCcCCeEEEEECCCCCCCcc---CCHHHHHHHHHHcCCEEEEECCCcccc----cCCcc-cccC
Confidence 37889999888889999999999999998 568999999999999999999997521 12222 2333
Q ss_pred CCCeEEEecCccccCCC-CceeEEEEeeCCCCcccchhHHHHHHhhhhh-ccCcchHHHHHHHHHHhhchHHHHHHHHHH
Q 014603 244 IVPVLTLGSISKRWIVP-GWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQGAVPQILEKTEEEFFSKITDI 321 (422)
Q Consensus 244 ~~~~i~i~s~sK~~~~~-G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~ 321 (422)
+ +++.|.+|.++++ ++..|++++++ +++.+++...... ...++++.++++...++. ++.+.++
T Consensus 198 D---ivv~S~tK~l~g~~~~~~G~vv~~~-------~~l~~~l~~~~~~~g~~~s~~~a~l~~~gl~t-----l~~r~~~ 262 (405)
T PRK08776 198 D---LVLHSTTKYINGHSDVVGGAVVARD-------AELHQQLVWWANALGLTGSPFDAFLTLRGLRT-----LDARLRV 262 (405)
T ss_pred C---EEEecCceeecCCCCceEEEEEeCC-------HHHHHHHHHHHHhcCCCCCHHHHHHHHhhhCc-----HHHHHHH
Confidence 3 8899999998766 47788888754 4566666554432 234667777776655543 7888889
Q ss_pred HHHHHHHHHHHhhcCCCCC
Q 014603 322 LRETADICCDRLKEIPCIT 340 (422)
Q Consensus 322 ~~~~~~~l~~~L~~~~~~~ 340 (422)
..++...+.+.|+++|.+.
T Consensus 263 ~~~na~~la~~L~~~p~v~ 281 (405)
T PRK08776 263 HQENADAIAALLDGHAAVN 281 (405)
T ss_pred HHHHHHHHHHHHHcCCCee
Confidence 9999999999999887654
No 193
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.94 E-value=3.3e-24 Score=206.27 Aligned_cols=355 Identities=15% Similarity=0.144 Sum_probs=216.8
Q ss_pred cCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHH
Q 014603 42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ 121 (422)
Q Consensus 42 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 121 (422)
.+|+.+|||..|......+ ..+|.+.+++.+++...... .......+.+..+++.|....+.+ ..+.++++++|++
T Consensus 51 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~q~~~~~~~--~~~~~~~~~~~~la~~L~~~~p~~-~~~~v~f~~sGse 126 (451)
T PRK06918 51 VDGNQYIDFAGAIGTINVG-HSHPKVKEALHKQVDQYIHT--GFNVMMYEPYIELAEKLAALAPGS-FDKKVLFLNSGAE 126 (451)
T ss_pred CCCCEEEEcCCchhhcCCC-CCCHHHHHHHHHHHHhccCc--cccccccHHHHHHHHHHHHhCCCC-CCCEEEEcCCcHH
Confidence 4688999999887554333 45789999999999763221 111112344455555555433211 1258999999999
Q ss_pred HHHHHHHHhc--CCCCEEEecCCCccchHHHHhhCCC--------------eEEEeeccCC--CCcccC--------HHH
Q 014603 122 AIEVILTVLA--RPGANILLPRPGFPYYEARATHSHL--------------EVRHFDLLPA--KGWEVD--------LDA 175 (422)
Q Consensus 122 a~~~~~~~l~--~~gd~Vl~~~~~~~~~~~~~~~~g~--------------~~~~~~~~~~--~~~~~d--------~~~ 175 (422)
|++.+++... ....+|+....+||++...+..... .+..+|.... ...+.. .+.
T Consensus 127 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (451)
T PRK06918 127 AVENAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEE 206 (451)
T ss_pred HHHHHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHH
Confidence 9999988642 2236799999999988654443211 0111221100 000110 122
Q ss_pred HHHhh----cCCceEEEEeCCCCC-ccc-ccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEE
Q 014603 176 VEALA----DENTVALVIINPGNP-CGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLT 249 (422)
Q Consensus 176 l~~~~----~~~~~~i~i~~p~np-tG~-~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~ 249 (422)
+++.+ ..+..+.+|..|... .|. .++.+.+++|.++|++||+++|+||+|.++.++|.. .++..++..++
T Consensus 207 ~~~~~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g~~-~a~~~~~v~pD--- 282 (451)
T PRK06918 207 FKNFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTGKY-FAIEHFDVVPD--- 282 (451)
T ss_pred HHHHHHhhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccCce-ehhHhcCCCCC---
Confidence 33332 235677788888544 465 445666999999999999999999999998877743 23444442222
Q ss_pred EecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhh-hhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHH
Q 014603 250 LGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADI 328 (422)
Q Consensus 250 i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~ 328 (422)
+.|+||.++ +|+|+||++++ +++++.+.... ..+.+.+++.+.++.++|+...+..+.+. +++..+.
T Consensus 283 i~t~sK~l~-~G~pig~v~~~--------~~i~~~~~~~~~~~T~~g~~l~~aaa~a~l~~i~~~~~~~~---~~~~g~~ 350 (451)
T PRK06918 283 LITVSKSLG-AGVPISGVIGR--------KEIMDESAPGELGGTYAGSPLGCAAALAVLDIIEKENLNDR---AIELGKV 350 (451)
T ss_pred EEeeehhhc-CCCccEEEEEc--------HHHHhccCCCCcCcCCCcCHHHHHHHHHHHHHHHHCCHHHH---HHHHHHH
Confidence 447899975 89999999986 46776664333 34557888999998888875433222222 2233333
Q ss_pred HHHHhh----cCCCCCCCCCCCCceEEEEecCccc--ccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cC
Q 014603 329 CCDRLK----EIPCITCPKKPEGSMFVMVKLNYSL--LEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VE 400 (422)
Q Consensus 329 l~~~L~----~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~ 400 (422)
+.+.|+ +.+.+. ...+.++++.|....... .+.......+.. .+.++||.+.|+..| .+++|++++ .+
T Consensus 351 l~~~l~~l~~~~~~~~-~vrg~G~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~Gvlv~~~~~~--~~~lrl~p~l~~t 426 (451)
T PRK06918 351 VMNRFEEMKNKYNCIG-DVRGLGAMCAFELVQDRKTKEPDKTLTANICK-EANKRGLLLLSAGTY--GNVIRVLMPLVIT 426 (451)
T ss_pred HHHHHHHHHhhCCCce-eeccceeEEEEEEccCCCcCCCcHHHHHHHHH-HHHHCCeEEeecCCC--CCEEEEECCCccC
Confidence 333333 343333 224555555554331110 000001223333 346679999997655 378999996 68
Q ss_pred hHHHHHHHHHHHHHHHHhcc
Q 014603 401 PSALEDGLGRMKAFYDRHAK 420 (422)
Q Consensus 401 ~~~l~~~~~~l~~~~~~~~~ 420 (422)
+++|++++++|+++++++..
T Consensus 427 ~~~id~~l~~l~~~l~~~~~ 446 (451)
T PRK06918 427 DEQLEEGLTIIEESLQACYE 446 (451)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999987643
No 194
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.94 E-value=2.3e-24 Score=203.31 Aligned_cols=220 Identities=21% Similarity=0.231 Sum_probs=161.8
Q ss_pred CCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchH----HHHhhCCCeEEEee
Q 014603 87 VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYE----ARATHSHLEVRHFD 162 (422)
Q Consensus 87 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~----~~~~~~g~~~~~~~ 162 (422)
+...++++.+++++ ..+.+++++||++|+..++.+++++||+|+++.+.|.+.. ..+...|++++.++
T Consensus 61 p~~~~le~~la~l~--------g~~~~v~~ssG~~Ai~~al~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd 132 (390)
T PRK08133 61 PTVTMFQERLAALE--------GAEACVATASGMAAILAVVMALLQAGDHVVSSRSLFGSTVSLFEKIFARFGIETTFVD 132 (390)
T ss_pred hHHHHHHHHHHHHh--------CCCcEEEECCHHHHHHHHHHHHhCCCCEEEEccCcchhHHHHHHHHHHHcCcEEEEEC
Confidence 34678899999988 2356889999999999999999999999999999997643 34556788888776
Q ss_pred ccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccC
Q 014603 163 LLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG 242 (422)
Q Consensus 163 ~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~ 242 (422)
.+ |++.+++.++++++++++++|+||+|.+. ++++|+++|+++|+++|+|++|...... .++ ..+
T Consensus 133 ~~-------d~~~l~~~i~~~tklV~ie~p~NptG~v~---dl~~I~~la~~~gi~livD~t~~~~~~~----~pl-~~g 197 (390)
T PRK08133 133 LT-------DLDAWRAAVRPNTKLFFLETPSNPLTELA---DIAALAEIAHAAGALLVVDNCFCTPALQ----QPL-KLG 197 (390)
T ss_pred CC-------CHHHHHHhcCcCCeEEEEECCCCCCCCcC---CHHHHHHHHHHcCCEEEEECCCcccccC----Cch-hhC
Confidence 42 77899999988999999999999999996 5788899999999999999998653221 121 223
Q ss_pred CCCCeEEEecCccccCCCCceeEE-EEeeCCCCcccchhHHHHHHhhhhh-ccCcchHHHHHHHHHHhhchHHHHHHHHH
Q 014603 243 SIVPVLTLGSISKRWIVPGWRLGW-LVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQGAVPQILEKTEEEFFSKITD 320 (422)
Q Consensus 243 ~~~~~i~i~s~sK~~~~~G~r~G~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 320 (422)
.+ +++.|+||.++++|.++|+ ++++ +++++++...... ....++..++.+...++ .+..+.+
T Consensus 198 ~D---ivv~S~sK~~~g~g~~~GG~vv~~--------~~~~~~~~~~~~~~g~~~~~~~a~~~l~gl~-----tl~~R~~ 261 (390)
T PRK08133 198 AD---VVIHSATKYLDGQGRVLGGAVVGS--------KELMEEVFGFLRTAGPTLSPFNAWVFLKGLE-----TLSLRME 261 (390)
T ss_pred Cc---EEEeecceeecCCcceEeEEEEcC--------HHHHHHHHHHHHHhCCCCCHHHHHHHHcccc-----hHHHHHH
Confidence 22 8899999999999999854 5543 3455555544332 22444444444433333 3566667
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCC
Q 014603 321 ILRETADICCDRLKEIPCITCPKKP 345 (422)
Q Consensus 321 ~~~~~~~~l~~~L~~~~~~~~~~~~ 345 (422)
+..+++..+.+.|+++|++..+.+|
T Consensus 262 ~~~~~a~~la~~L~~~p~v~~v~yp 286 (390)
T PRK08133 262 AHSANALALAEWLEAHPGVERVFYP 286 (390)
T ss_pred HHHHHHHHHHHHHHhCCCeeEEECC
Confidence 7778888999999988776544343
No 195
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.94 E-value=2e-24 Score=203.81 Aligned_cols=288 Identities=16% Similarity=0.133 Sum_probs=195.6
Q ss_pred CCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHH----hhCCCe
Q 014603 82 CYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARA----THSHLE 157 (422)
Q Consensus 82 ~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~----~~~g~~ 157 (422)
+|+. +...+|++.++++.+ .+..+++++|++|+..++.+++++||+|+++.+.|.+..... ...|++
T Consensus 57 r~~~-pt~~~Le~~lA~l~G--------~~~al~~~sG~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi~ 127 (386)
T PRK06767 57 RLGN-PTVKLFEERMAVLEG--------GEEALAFGSGMAAISATLIGFLKAGDHIICSNGLYGCTYGFLEVLEEKFMIT 127 (386)
T ss_pred CCCC-cchHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHHHhhcCeE
Confidence 4443 457899999999983 235666677788999999999999999999999887654433 334554
Q ss_pred EEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCC
Q 014603 158 VRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVP 237 (422)
Q Consensus 158 ~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~ 237 (422)
+..++. .|++.+++.++++++++++++|+||+|.+++ +++|.++|+++|+++|+|++|+.... + .+
T Consensus 128 ~~~~~~-------~d~~~l~~~i~~~tklV~lesp~NptG~v~d---l~~I~~la~~~g~~vivD~a~a~~~~-~---~p 193 (386)
T PRK06767 128 HSFCDM-------ETEADIENKIRPNTKLIFVETPINPTMKLID---LKQVIRVAKRNGLLVIVDNTFCSPYL-Q---RP 193 (386)
T ss_pred EEEeCC-------CCHHHHHHhhCcCceEEEEeCCCCCCceecC---HHHHHHHHHHcCCEEEEECCCccccc-C---Cc
Confidence 443322 3788999988889999999999999999964 78888888999999999999864221 1 12
Q ss_pred ccccCCCCCeEEEecCccccCCCCcee-EEEEeeCCCCcccchhHHHHHHh-hhh-hccCcchHHHHHHHHHHhhchHHH
Q 014603 238 MGVFGSIVPVLTLGSISKRWIVPGWRL-GWLVTSDPNGILQDSGIVDSIKS-FLN-ISSDPATFIQGAVPQILEKTEEEF 314 (422)
Q Consensus 238 ~~~~~~~~~~i~i~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~a~~~~l~~~~~~~ 314 (422)
+ ..+.+ +++.|++|.++++|.++ |++++++ +.+.++.. ... ..+..+++.++++...|+.
T Consensus 194 l-~~g~D---iv~~S~sK~l~g~g~~~gG~v~~~~--------~~i~~~~~~~~~~~g~~~~~~~a~l~~~~L~t----- 256 (386)
T PRK06767 194 L-ELGCD---AVVHSATKYIGGHGDVVAGVTICKT--------RALAEKIRPMRKDIGGIMAPFDAWLLLRGLKT----- 256 (386)
T ss_pred h-hcCCc---EEEecCcceecCCCCceeEEEEeCh--------HHHHHHHHHHHHHhCCCCCHHHHHHHHcCCCc-----
Confidence 2 12222 78889999998888885 8888753 44544432 222 2234455656655555543
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC----------CceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecC
Q 014603 315 FSKITDILRETADICCDRLKEIPCITCPKKPE----------GSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPG 384 (422)
Q Consensus 315 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~----------~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g 384 (422)
+..+.++.+++.+.+.+.|+++|++..+..|. .|..+.+.++.. ..+..+++..+ +..++.+.-|
T Consensus 257 l~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~~----~~~~~~f~~~l-~~~~~~~s~G 331 (386)
T PRK06767 257 LAVRMDRHCDNAEKIVSFLKNHDAVEGVWYPEGELASRQMKRGGGVISFSIKGG----KEETQAFINDL-HFITIAVSLG 331 (386)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCccEEECCCcHHHHHhCCCCCceEEEEEcCC----HHHHHHHHHhC-CccEEecCCC
Confidence 45567788999999999999999987544442 233455556421 01234555554 4455555444
Q ss_pred CCCC----------------------C-CCeEEEEeccChHHHHHHHHHHHHHHH
Q 014603 385 ITVG----------------------L-KDWLRITFAVEPSALEDGLGRMKAFYD 416 (422)
Q Consensus 385 ~~~~----------------------~-~~~iRis~~~~~~~l~~~~~~l~~~~~ 416 (422)
.... . ++.||+|++. |+.+.++..|.+++.
T Consensus 332 ~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGl--E~~~dl~~dl~~al~ 384 (386)
T PRK06767 332 DTETLIQHPATMTHAAIPAELRQEMGIYDNLIRLSVGL--ESWEDIVSDLEQALK 384 (386)
T ss_pred CcCccccCCCccccccCCHHHHHhcCCCCCeEEEEecc--CCHHHHHHHHHHHHh
Confidence 3211 0 3679999997 357777777777775
No 196
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.94 E-value=1.2e-24 Score=203.48 Aligned_cols=326 Identities=13% Similarity=0.088 Sum_probs=210.4
Q ss_pred CCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHH
Q 014603 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI 123 (422)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~ 123 (422)
-+.+||-+.--+.. ..-.++++++++|.+..++ |. +.+++++.+.+++.+.+| .+++++++|+|+|+
T Consensus 7 ~~~~ina~g~~t~~-g~s~~~~~v~~a~~~~~~~-----~~---~~~~~~~~~~~~~a~~~g----~~~~~~~~g~t~al 73 (363)
T TIGR01437 7 LKKVINASGKMTIL-GVSTVSDEVADAQKRGAQN-----YF---EIKELVNKTGEYIANLLG----VEDAVIVSSASAGI 73 (363)
T ss_pred CceEEECCcEeecC-CCCCCCHHHHHHHHHHHhc-----CC---CHHHHHHHHHHHHHHhhC----CCeEEEEcCHHHHH
Confidence 34556654333221 1124789999999998643 22 234566666666555443 35789999999999
Q ss_pred HHHHHHhcCCCC---------------EEEecCCCccch----HHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCc
Q 014603 124 EVILTVLARPGA---------------NILLPRPGFPYY----EARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENT 184 (422)
Q Consensus 124 ~~~~~~l~~~gd---------------~Vl~~~~~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~ 184 (422)
.+++.+++++|| +|+++.|.|..| .......|+.++.++.+ +.+|++.+++++++++
T Consensus 74 ~~al~al~~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~~----~~~d~~~le~ai~~~t 149 (363)
T TIGR01437 74 AQSVAAVITRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGYA----NECSAEQLEAAITEKT 149 (363)
T ss_pred HHHHHHHhcCCCcchhhcccccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcCC----CCCCHHHHHHhcChhc
Confidence 999999999988 999999777655 45667789898888752 3589999999999999
Q ss_pred eEEE-EeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCce
Q 014603 185 VALV-IINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWR 263 (422)
Q Consensus 185 ~~i~-i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r 263 (422)
++++ +++|+||+|.+.+ +++|.++|+++|+++|+|++|+.- . ..+..++.+ ++++|++|++ .|++
T Consensus 150 ~ai~~v~~~~~~~g~~~~---~~~i~~~a~~~gi~vivD~a~~~~---~---~~~~~~g~D---~~~~S~~K~l--~gp~ 215 (363)
T TIGR01437 150 AAILYIKSHHCVQKSMLS---VEDAAQVAQEHNLPLIVDAAAEED---L---QKYYRLGAD---LVIYSGAKAI--EGPT 215 (363)
T ss_pred eEEEEEecCCCCcCCcCC---HHHHHHHHHHcCCeEEEECCCCCc---h---HHHHHcCCC---EEEEeCCccc--CCCc
Confidence 8776 5678999999865 567899999999999999999721 1 111223332 7889999975 5777
Q ss_pred eEEEEeeCCCCcccchhHHHHHHhhhhhcc---CcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 014603 264 LGWLVTSDPNGILQDSGIVDSIKSFLNISS---DPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCIT 340 (422)
Q Consensus 264 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 340 (422)
.|+++.+ +++++.++....... ........++.++++... ....+..+...++++.+.+.|+++|++.
T Consensus 216 ~G~l~~~--------~~~i~~~~~~~~~~~~~~~~~~~~~~gl~aAl~~~~-~~~~~~~~~~~~~~~~l~~~L~~i~g~~ 286 (363)
T TIGR01437 216 SGLVLGK--------KKYIEWVKLQSKGIGRAMKVGKENILGLTAALEQYL-STGKESGAEMVAKLTPFIEALNTLKGVS 286 (363)
T ss_pred eEEEEEc--------HHHHHHHHhccCCCcceeccCHHHHHHHHHHHHHHH-ccCcccHHHHHHHHHHHHHHHhcCCCeE
Confidence 8998874 346665543221100 111122233333443321 1112233344456778999999998887
Q ss_pred CCCC-CCCce---EEEEecCcccccCCCCHHHHHHHHHHhcC--eEEecCCCCCCCCeEEEEec-cChHHHHHHHHHHHH
Q 014603 341 CPKK-PEGSM---FVMVKLNYSLLEGINSDMEFALKLAKEES--VIVLPGITVGLKDWLRITFA-VEPSALEDGLGRMKA 413 (422)
Q Consensus 341 ~~~~-~~~g~---~~~~~~~~~~~~~~~~~~~~~~~l~~~~g--i~v~~g~~~~~~~~iRis~~-~~~~~l~~~~~~l~~ 413 (422)
+... +..+. ..-+.++... .+ .+..++...| ++++ |.+++ .+..++.+|+++. .+++|++.++++|.+
T Consensus 287 ~~~~~~~~~~~~~~~~v~~~~~~-~g-~~~~~l~~~L-~~~~~~I~~r~--~~~~~~~~~l~~~~~~~~e~~~~~~~l~~ 361 (363)
T TIGR01437 287 ASIVQDEAGRDIARAEIRFDESE-LG-MTAADVVQAL-RQGEPAIYTRG--YKANEGIIEIDPRSVTGGQLDIIVERIRE 361 (363)
T ss_pred EEEecCCCCCcCceEEEEEeccC-CC-CCHHHHHHHH-hcCCCCEEEee--eeecCCeEEEEeecCCHHHHHHHHHHHHH
Confidence 4311 11111 1112232110 01 2567777766 5556 66655 3555788999997 678999999999987
Q ss_pred H
Q 014603 414 F 414 (422)
Q Consensus 414 ~ 414 (422)
+
T Consensus 362 ~ 362 (363)
T TIGR01437 362 I 362 (363)
T ss_pred h
Confidence 5
No 197
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.94 E-value=4.9e-24 Score=201.43 Aligned_cols=289 Identities=20% Similarity=0.266 Sum_probs=194.5
Q ss_pred CCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHH----HhhCCCe
Q 014603 82 CYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEAR----ATHSHLE 157 (422)
Q Consensus 82 ~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~----~~~~g~~ 157 (422)
+|+. +...++++.+|++++ .+ ..+++++|+.++..++.+++++||+|+++.+.|.++... +...|++
T Consensus 61 r~~~-p~~~~Le~~lA~l~G------~~--~~~~~~sG~~Ai~~~l~~~l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~ 131 (398)
T PRK07504 61 RYSN-PTVDMFEKRMCALEG------AE--DARATASGMAAVTAAILCQVKAGDHVVAARALFGSCRYVVETLLPRYGIE 131 (398)
T ss_pred cCCC-chHHHHHHHHHHHhC------CC--eeeEecCHHHHHHHHHHHHhCCCCEEEEcCCchhHHHHHHHHHHhhcCeE
Confidence 4433 346899999999983 23 345677889999888888889999999999999875433 3456777
Q ss_pred EEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCC
Q 014603 158 VRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVP 237 (422)
Q Consensus 158 ~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~ 237 (422)
++.++ ..|++.+++.++++++++++++|+||+|.+++ +++|.++|+++|+++|+|++|+...+. .+
T Consensus 132 v~~vd-------~~d~e~l~~ai~~~tklV~lesp~NptG~v~d---l~~I~~la~~~gi~lvvD~a~a~~~~~----~~ 197 (398)
T PRK07504 132 STLVD-------GLDLDNWEKAVRPNTKVFFLESPTNPTLEVID---IAAVAKIANQAGAKLVVDNVFATPLFQ----KP 197 (398)
T ss_pred EEEEC-------CCCHHHHHHhcCcCceEEEEECCCCCCcEecC---HHHHHHHHHHcCCEEEEECCccccccC----Cc
Confidence 77664 26899999999889999999999999999965 788888899999999999999753321 12
Q ss_pred ccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHH-HHHHhhh-hhccCcchHHHHHHHHHHhhchHHHH
Q 014603 238 MGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIV-DSIKSFL-NISSDPATFIQGAVPQILEKTEEEFF 315 (422)
Q Consensus 238 ~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~ 315 (422)
+ .++. .+++.|++|.++++|.++|++++.+ ++++ +.++... ......++..++.+...|+. +
T Consensus 198 ~-~~ga---Divv~S~sK~l~g~g~~~GG~vv~~-------~~~i~~~~~~~~~~~g~~~s~~~A~~~l~~L~t-----l 261 (398)
T PRK07504 198 L-ELGA---HIVVYSATKHIDGQGRCLGGVVLSD-------KAWIEEHLQDYFRHTGPSLSPFNAWTLLKGLET-----L 261 (398)
T ss_pred h-hhCC---CEEEeeccccccCCccceEEEEEeC-------cHHHHHHHHHHHHHhCCCCCHHHHHHHHhccch-----H
Confidence 1 2233 3889999999999999987544432 2333 3344322 22335566666666666654 5
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC----------------CceEEEEecCcccccCCCCHHHHHHHHHHhcCe
Q 014603 316 SKITDILRETADICCDRLKEIPCITCPKKPE----------------GSMFVMVKLNYSLLEGINSDMEFALKLAKEESV 379 (422)
Q Consensus 316 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~----------------~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi 379 (422)
..+.++..++.+.+.+.|+++|++.-+.+|. .|..+.+.+.. ..+...+++++-.+
T Consensus 262 ~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~g~g~~~s~~~~~--------~~~~~~~~~~~l~~ 333 (398)
T PRK07504 262 PVRVRQQTESAAAIADFLAGHPKVARVIYPGRADHPQADIIAKQMTGGSTLVAFELKG--------GKEAAFRFLNALKI 333 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHHhCCCCccEEEEEeCC--------CHHHHHHHHHhCCc
Confidence 6677777788899999999887764233331 13355566642 12222333333333
Q ss_pred EEe---cCCCC----------------------CC-CCeEEEEeccChHHHHHHHHHHHHHHHHhc
Q 014603 380 IVL---PGITV----------------------GL-KDWLRITFAVEPSALEDGLGRMKAFYDRHA 419 (422)
Q Consensus 380 ~v~---~g~~~----------------------~~-~~~iRis~~~~~~~l~~~~~~l~~~~~~~~ 419 (422)
.-. -|... +. ++.||+|++.+ +.+.++..|.+++++.+
T Consensus 334 ~~~~~slG~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE--~~~dl~~dl~~al~~~~ 397 (398)
T PRK07504 334 VRISNNLGDAKSLITHPATTTHKNLSPEARAELGISEGFLRLSAGLE--DTDDLIEDLAAALKKVR 397 (398)
T ss_pred ceecccCCCCCeeeeCCCCCCcccCCHHHHHhcCCCCCeEEEEeccC--CHHHHHHHHHHHHHhhh
Confidence 221 11100 00 46899999973 56777778888876543
No 198
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.94 E-value=8.4e-24 Score=201.52 Aligned_cols=350 Identities=14% Similarity=0.153 Sum_probs=219.5
Q ss_pred cCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHH
Q 014603 42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ 121 (422)
Q Consensus 42 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 121 (422)
.+|+.+|||..|......+ ..+|.+.+++.+++.......+.. ...+.+..+++.+.+..+ ....+.++|+++|++
T Consensus 37 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~ql~~~~~~~~~~--~~~~~~~~la~~l~~~~p-~~~~~~~~f~~sGse 112 (421)
T PRK09792 37 VEGNEYIDFAAGIAVLNTG-HRHPDLVAAVEQQLQQFTHTAYQI--VPYESYVTLAEKINALAP-VSGQAKTAFFTTGAE 112 (421)
T ss_pred CCCCEEEEccCchhhhcCC-CCCHHHHHHHHHHHHhccCcccCc--cCCHHHHHHHHHHHHhCC-CCCCceEEEeCChHH
Confidence 4689999998886553333 458999999999987632212211 122344455555544222 112358999999999
Q ss_pred HHHHHHHHhc--CCCCEEEecCCCccchHHHHhhC-CC-------------eEEEeeccCCCCccc----CHHHHHHhhc
Q 014603 122 AIEVILTVLA--RPGANILLPRPGFPYYEARATHS-HL-------------EVRHFDLLPAKGWEV----DLDAVEALAD 181 (422)
Q Consensus 122 a~~~~~~~l~--~~gd~Vl~~~~~~~~~~~~~~~~-g~-------------~~~~~~~~~~~~~~~----d~~~l~~~~~ 181 (422)
|++.+++... ....+|+....+||++...+... +. .+..+|..... .+. +++.+++.+.
T Consensus 113 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~-~~~~~~~~~~~l~~~~~ 191 (421)
T PRK09792 113 AVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDL-HGISTQDSLDAIERLFK 191 (421)
T ss_pred HHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccc-ccccHHHHHHHHHHHHH
Confidence 9999988653 12368999999999875433322 11 11222221110 011 2466777664
Q ss_pred ----CCceEEEEeCC-CCCccccc-CHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCcc
Q 014603 182 ----ENTVALVIINP-GNPCGNVY-TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISK 255 (422)
Q Consensus 182 ----~~~~~i~i~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK 255 (422)
++..+.++..| ++++|..+ |.+.+++|.++|++||+++|+||++.++.++|.. ..+..++..++ +.+++|
T Consensus 192 ~~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~-~a~~~~~~~pD---i~t~gK 267 (421)
T PRK09792 192 SDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKL-FAMDHYADKPD---LMTMAK 267 (421)
T ss_pred hccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCch-hHHHhcCCCCc---EEEeeh
Confidence 23445556666 78999765 8999999999999999999999999998887753 23334432222 567899
Q ss_pred ccCCCCceeEEEEeeCCCCcccchhHHHHHHhhh-hhccCcchHHHHHHHHHHhhchH-HHHHHHHHHHHHHHHHHHHHh
Q 014603 256 RWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQGAVPQILEKTEE-EFFSKITDILRETADICCDRL 333 (422)
Q Consensus 256 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~L 333 (422)
.+ .+|+|+||++++ +++++.+.... ..+...+++.++++.+.++...+ ..+++.+ .+.++.+...+.|
T Consensus 268 ~l-~~G~pigav~~~--------~~i~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~~~~~~~-~~g~~l~~~l~~l 337 (421)
T PRK09792 268 SL-AGGMPLSGVVGN--------ANIMDAPAPGGLGGTYAGNPLAVAAAHAVLNIIDKESLCERAN-QLGQRLKNTLIDA 337 (421)
T ss_pred hh-cCCCceEEEEEc--------HHHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHH-HHHHHHHHHHHHH
Confidence 96 588999999986 45666654332 23557888999988888775432 2333333 2222222222223
Q ss_pred -hcCCCCCCCCCCCC-ceEEEEecCccccc--CCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHH
Q 014603 334 -KEIPCITCPKKPEG-SMFVMVKLNYSLLE--GINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDG 407 (422)
Q Consensus 334 -~~~~~~~~~~~~~~-g~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~ 407 (422)
+++|.+. .+.+ |.++|+.++..... .......+...+ .++||.+.+... ..+.+|+.++ .++++++++
T Consensus 338 ~~~~p~v~---~vrG~Gl~~~ie~~~~~~~~~~~~~~~~l~~~~-~~~Gv~i~~~g~--~~~~irl~P~l~i~~~ei~~~ 411 (421)
T PRK09792 338 KESVPAIA---AVRGLGSMIAAEFNDPQTGEPSAAIAQKIQQRA-LAQGLLLLTCGA--YGNVIRFLYPLTIPDAQFDAA 411 (421)
T ss_pred HHhCCCcc---eecccceEEEEEecCCccCCcchHHHHHHHHHH-HHCCcEEeecCC--CCCEEEEeCCCcCCHHHHHHH
Confidence 2355332 4555 89999998642100 000123444444 567999964221 1588999987 689999999
Q ss_pred HHHHHHHHH
Q 014603 408 LGRMKAFYD 416 (422)
Q Consensus 408 ~~~l~~~~~ 416 (422)
+++|.++++
T Consensus 412 ~~~l~~~l~ 420 (421)
T PRK09792 412 MKILQDALS 420 (421)
T ss_pred HHHHHHHHh
Confidence 999999875
No 199
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.94 E-value=3.6e-24 Score=201.05 Aligned_cols=227 Identities=19% Similarity=0.196 Sum_probs=167.2
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHH----hhCC
Q 014603 80 FNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARA----THSH 155 (422)
Q Consensus 80 ~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~----~~~g 155 (422)
+.+|+. ....+++++++++.+ .+++++++|+++|+..++.+++++||+|+++.|+|.+....+ ...+
T Consensus 45 Y~R~~~-p~~~~le~~lA~l~g--------~~~v~~~~gg~~Ai~~~l~all~~GD~Vl~~~p~y~~~~~~~~~~~~~~~ 115 (382)
T TIGR02080 45 YSRSGN-PTRDLLQQALAELEG--------GAGAVVTNTGMSAIHLVTTALLGPDDLLVAPHDCYGGTYRLLNALAKKGC 115 (382)
T ss_pred ccCCCC-chHHHHHHHHHHHhC--------CCcEEEEcCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhcC
Confidence 445544 346889999999872 468999999999999999999999999999999998644332 2223
Q ss_pred CeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCC
Q 014603 156 LEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPF 235 (422)
Q Consensus 156 ~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~ 235 (422)
.++..++ ..|++.+++.++++++++++++|+||||.+++ +++|.++|+++|+++|+|++|......
T Consensus 116 ~~v~~~d-------~~d~~~l~~ai~~~tklV~l~~p~NPtG~~~d---l~~I~~la~~~g~~vvvD~a~~~~~~~---- 181 (382)
T TIGR02080 116 FRVLFVD-------QGDEQALRAALAQKPKLVLIETPSNPLLRVVD---IAKICHLAKAVGAVVVVDNTFLSPALQ---- 181 (382)
T ss_pred eEEEEEC-------CCCHHHHHHhcCcCceEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCcccccC----
Confidence 4444332 13789999999888999999999999999975 677888889999999999999753221
Q ss_pred CCccccCCCCCeEEEecCccccCC-CCceeEEEEeeCCCCcccchhHHHHHHhhhhh-ccCcchHHHHHHHHHHhhchHH
Q 014603 236 VPMGVFGSIVPVLTLGSISKRWIV-PGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQGAVPQILEKTEEE 313 (422)
Q Consensus 236 ~~~~~~~~~~~~i~i~s~sK~~~~-~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~~ 313 (422)
.++ .++.+ ++++|+||.+++ ++++.|++++.+ +++.+++...... ....+++.++.+...++.
T Consensus 182 ~pl-~~gaD---ivv~S~sK~l~G~~~~~~G~i~~~~-------~~~~~~l~~~~~~~g~~~sp~~a~l~lr~l~t---- 246 (382)
T TIGR02080 182 NPL-ALGAD---LVLHSCTKYLNGHSDVIAGAVIAKD-------PQVAEELAWWANNLGVTGGAFDSYLTLRGLRT---- 246 (382)
T ss_pred Cch-hhCCC---EEEeecceeccCCCCceeEEEEeCC-------HHHHHHHHHHHHccCCCCCHHHHHHHHcccch----
Confidence 122 22332 888999999864 678999988754 4577777655543 345666776666555543
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 014603 314 FFSKITDILRETADICCDRLKEIPCITCPKKP 345 (422)
Q Consensus 314 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 345 (422)
+..+.++..++...+.+.|+.+|.+..+.+|
T Consensus 247 -l~~R~~~~~~na~~~a~~L~~~p~v~~V~yP 277 (382)
T TIGR02080 247 -LVARMRLQQRNAQAIVEYLQTQPLVKKIYYP 277 (382)
T ss_pred -HHHHHHHHHHHHHHHHHHHHhCCCeeEEECC
Confidence 5556777888899999999988765533343
No 200
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.94 E-value=4.8e-24 Score=201.12 Aligned_cols=220 Identities=15% Similarity=0.175 Sum_probs=164.6
Q ss_pred CCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchH----HHHhhCCCeEEEee
Q 014603 87 VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYE----ARATHSHLEVRHFD 162 (422)
Q Consensus 87 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~----~~~~~~g~~~~~~~ 162 (422)
+...++++.++++++ .+..+++++|++|+..++.+++++||+|+++.|+|.+.. ..+...|++++.++
T Consensus 64 p~~~~le~~lA~l~g--------~~~~i~~ssG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~vd 135 (398)
T PRK08249 64 PTVQAFEEKVRILEG--------AEAATAFSTGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFTEFLPRMGVDVTLCE 135 (398)
T ss_pred hHHHHHHHHHHHHhC--------CCeEEEeCChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHHhhCCeEEEEcC
Confidence 456899999999983 345677788899999999999999999999999998653 33456677776554
Q ss_pred ccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccC
Q 014603 163 LLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG 242 (422)
Q Consensus 163 ~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~ 242 (422)
. .|++.+++.++++++++++++|+||+|.+++ +++|.++|+++|+++|+|++|+..... .++ ..+
T Consensus 136 ~-------~d~e~l~~~i~~~tklV~ie~p~NPtg~v~d---l~~I~~la~~~gi~livD~t~a~~~~~----~~l-~~~ 200 (398)
T PRK08249 136 T-------GDHEQIEAEIAKGCDLLYLETPTNPTLKIVD---IERLAAAAKKVGALVVVDNTFATPINQ----NPL-ALG 200 (398)
T ss_pred C-------CCHHHHHHhcCCCCeEEEEECCCCCCCccCC---HHHHHHHHHHcCCEEEEECCcCccccC----Cch-hhC
Confidence 2 5889999999889999999999999999975 777888899999999999999853321 122 223
Q ss_pred CCCCeEEEecCccccCCCCcee-EEEEeeCCCCcccchhHHHHHHhhhhh-ccCcchHHHHHHHHHHhhchHHHHHHHHH
Q 014603 243 SIVPVLTLGSISKRWIVPGWRL-GWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQGAVPQILEKTEEEFFSKITD 320 (422)
Q Consensus 243 ~~~~~i~i~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 320 (422)
.+ +++.|+||.++++|.++ |+++++ +++.+++...... ....++..++.+...++. +..+.+
T Consensus 201 ~D---ivv~S~sK~l~g~~~~~gG~vv~~--------~~l~~~l~~~~~~~g~~~s~~~a~l~l~~l~t-----L~~R~~ 264 (398)
T PRK08249 201 AD---LVIHSATKFLSGHADALGGVVCGS--------KELMEQVYHYREINGATMDPMSAYLILRGMKT-----LKLRVR 264 (398)
T ss_pred CC---EEeccCceecCCCCCceEEEEECC--------HHHHHHHHHHHHhcCCCCCHHHHHHHHhCcch-----HHHHHH
Confidence 33 78899999998878776 555543 4677777666543 335566666666665554 566667
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCC
Q 014603 321 ILRETADICCDRLKEIPCITCPKKP 345 (422)
Q Consensus 321 ~~~~~~~~l~~~L~~~~~~~~~~~~ 345 (422)
+..++++.+.+.|+++|.+.-+.+|
T Consensus 265 ~~~~na~~la~~L~~~p~v~~V~yP 289 (398)
T PRK08249 265 QQQESAMALAKYLQTHPKVEAVYYP 289 (398)
T ss_pred HHHHHHHHHHHHHHcCCCeeEEECC
Confidence 7788889999999987765433333
No 201
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.94 E-value=6e-24 Score=199.61 Aligned_cols=292 Identities=19% Similarity=0.218 Sum_probs=202.9
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHH----hhCC
Q 014603 80 FNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARA----THSH 155 (422)
Q Consensus 80 ~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~----~~~g 155 (422)
+.+|+. ....++++++|++.+ .+.+++++|+++++..++.+++++||+|++++|+|++....+ ...+
T Consensus 46 Y~R~~~-pt~~~L~~~lA~l~g--------~~~~i~~~sg~~Ai~~~l~~l~~~GD~Vl~~~~~y~~~~~~~~~~~~~~g 116 (386)
T PRK08045 46 YSRRGN-PTRDVVQRALAELEG--------GAGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGC 116 (386)
T ss_pred eeCCCC-ccHHHHHHHHHHHhC--------CCeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhCC
Confidence 334544 346899999999873 246999999999999999999999999999999998643222 2233
Q ss_pred CeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCC
Q 014603 156 LEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPF 235 (422)
Q Consensus 156 ~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~ 235 (422)
.++..++ ..|++.+++.++++++++++++|+||||.+++ +++|.++|+++|+++|+|++|..... .
T Consensus 117 i~v~~vd-------~~d~e~l~~~l~~~tklV~l~sP~NPtG~v~d---i~~I~~ia~~~g~~vivDeay~~~~~----~ 182 (386)
T PRK08045 117 YRVLFVD-------QGDEQALRAALAEKPKLVLVESPSNPLLRVVD---IAKICHLAREAGAVSVVDNTFLSPAL----Q 182 (386)
T ss_pred eEEEEeC-------CCCHHHHHHhcccCCeEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCcccc----C
Confidence 4554432 15889999999889999999999999999975 67788888899999999999976322 1
Q ss_pred CCccccCCCCCeEEEecCccccCC-CCceeEEEEeeCCCCcccchhHHHHHHhhhh-hccCcchHHHHHHHHHHhhchHH
Q 014603 236 VPMGVFGSIVPVLTLGSISKRWIV-PGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQGAVPQILEKTEEE 313 (422)
Q Consensus 236 ~~~~~~~~~~~~i~i~s~sK~~~~-~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~ 313 (422)
.++ ..+.+ +++.|++|.+++ ++.+.|++++++ +++.+++..... .....+++.++.+...|+.
T Consensus 183 ~pl-~~gaD---ivv~S~tK~l~G~~d~~~G~vi~~~-------~~~~~~l~~~~~~~g~~~~p~~~~l~~rgl~t---- 247 (386)
T PRK08045 183 NPL-ALGAD---LVLHSCTKYLNGHSDVVAGVVIAKD-------PDVVTELAWWANNIGVTGGAFDSYLLLRGLRT---- 247 (386)
T ss_pred Cch-hhCCC---EEEeecceeccCCCCceeEEEEeCc-------HHHHHHHHHHHHhcCCCCCHHHHHHHHhhhcc----
Confidence 222 22333 889999999864 567899988754 456666654443 3446788888888888875
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC----------------CceEEEEecCcccccCCCCHHHHHHHHHHhc
Q 014603 314 FFSKITDILRETADICCDRLKEIPCITCPKKPE----------------GSMFVMVKLNYSLLEGINSDMEFALKLAKEE 377 (422)
Q Consensus 314 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~----------------~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 377 (422)
+..+.++..+++..+.+.|+++|.+..+.+|. .|-.+.+.++. +.+.+.+++++-
T Consensus 248 -l~~R~~~~~~na~~la~~L~~~p~v~~V~yp~l~~~p~~~~~~~~~~g~g~~~s~~~~~--------~~~~~~~f~~~l 318 (386)
T PRK08045 248 -LVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDG--------DEQTLRRFLGGL 318 (386)
T ss_pred -HHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEecC--------cHHHHHHHHHhc
Confidence 78888899999999999999887764333331 13344555642 112222333332
Q ss_pred CeEE-e--cCCCC----------------------CC-CCeEEEEeccChHHHHHHHHHHHHHHHHhcc
Q 014603 378 SVIV-L--PGITV----------------------GL-KDWLRITFAVEPSALEDGLGRMKAFYDRHAK 420 (422)
Q Consensus 378 gi~v-~--~g~~~----------------------~~-~~~iRis~~~~~~~l~~~~~~l~~~~~~~~~ 420 (422)
.+.. . -|... +. ++.||+|++. |+.+.+++.|.++++...|
T Consensus 319 ~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGl--E~~~dl~~dl~~al~~~~~ 385 (386)
T PRK08045 319 SLFTLAESLGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTGI--EDGEDLIADLENGFRAANK 385 (386)
T ss_pred cceeEeccCCCCceeEeCCCCcccccCCHHHHHhcCCCCCeEEEEeCc--CCHHHHHHHHHHHHHHhhc
Confidence 3321 1 11110 01 4689999997 4577777888888876543
No 202
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.94 E-value=5.3e-24 Score=201.15 Aligned_cols=226 Identities=17% Similarity=0.163 Sum_probs=170.4
Q ss_pred CCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccc----hHHHHhhCCC
Q 014603 81 NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPY----YEARATHSHL 156 (422)
Q Consensus 81 ~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~----~~~~~~~~g~ 156 (422)
.+|+. +...++++.++++.+ .++.+++++|+.|+..++.+++++||+|+++...|.+ +...++..|+
T Consensus 65 ~r~~~-p~~~~le~~lA~l~g--------~~~al~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~ 135 (403)
T PRK07810 65 SRYGN-PTVSMFEERLRLIEG--------AEACFATASGMSAVFTALGALLGAGDRLVAARSLFGSCFVVCNEILPRWGV 135 (403)
T ss_pred eCCCC-chHHHHHHHHHHHhC--------CCcEEEECChHHHHHHHHHHHhCCCCEEEEccCCcchHHHHHHHHHHHcCc
Confidence 34544 347899999999982 3478899999999999999999999999998866633 3455667888
Q ss_pred eEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCC
Q 014603 157 EVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFV 236 (422)
Q Consensus 157 ~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~ 236 (422)
+++.++. .|++.+++.++++++++++++|+||+|.+. ++++|+++|+++|+++|+|++|+...+. .
T Consensus 136 ~v~~vd~-------~d~~~l~~ai~~~tklV~~esp~Nptg~v~---dl~~I~~la~~~g~~vivD~a~a~~~~~----~ 201 (403)
T PRK07810 136 ETVFVDG-------EDLSQWEEALSVPTQAVFFETPSNPMQSLV---DIAAVSELAHAAGAKVVLDNVFATPLLQ----R 201 (403)
T ss_pred EEEEECC-------CCHHHHHHhcCcCceEEEEECCCCCCCeec---CHHHHHHHHHHcCCEEEEECCCCccccC----C
Confidence 8888753 388999999988999999999999999985 6888899999999999999999753321 1
Q ss_pred CccccCCCCCeEEEecCccccCCCCcee-EEEEeeCCCCcccchhHHHHHHhhh-hhccCcchHHHHHHHHHHhhchHHH
Q 014603 237 PMGVFGSIVPVLTLGSISKRWIVPGWRL-GWLVTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQGAVPQILEKTEEEF 314 (422)
Q Consensus 237 ~~~~~~~~~~~i~i~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~ 314 (422)
++ ..+.| +++.|++|.+++.|.++ |++++++ +.+...++... ......++..++.+...|+.
T Consensus 202 ~~-~~gaD---ivv~S~tK~l~g~g~~~gG~v~~~~-------~~~~~~l~~~~~~~g~~~s~~~a~l~l~~L~t----- 265 (403)
T PRK07810 202 GL-PLGAD---VVVYSGTKHIDGQGRVLGGAILGDR-------EYIDGPVQKLMRHTGPALSAFNAWVLLKGLET----- 265 (403)
T ss_pred hh-hcCCc---EEEccCCceecCCcCceeEEEEeCh-------HHHHHHHHHHHHHhCCCCCHHHHHHHHhccCc-----
Confidence 22 22333 88999999998888887 7777653 12223344332 23346677888887777765
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 014603 315 FSKITDILRETADICCDRLKEIPCITCPKKP 345 (422)
Q Consensus 315 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 345 (422)
+..+.++..++...+.+.|+++|.+..+.+|
T Consensus 266 l~~R~~~~~~~a~~~a~~L~~~p~v~~V~yP 296 (403)
T PRK07810 266 LALRVRHSNASALRIAEFLEGHPAVRWVRYP 296 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCccEEECC
Confidence 6777788888888899999998877644444
No 203
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.94 E-value=1.9e-23 Score=196.08 Aligned_cols=325 Identities=13% Similarity=0.095 Sum_probs=221.7
Q ss_pred CCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCC------CCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecC
Q 014603 45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFN------CYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLG 118 (422)
Q Consensus 45 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~------~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g 118 (422)
+.+++|++++ |.++..+|+++++..+.++..... -++....+.++++.+|+|+ ..+..+++++
T Consensus 102 r~~l~FsSnd---YLGL~~~p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~--------g~e~all~sS 170 (476)
T PLN02955 102 KKLLLFSGND---YLGLSSHPTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLK--------KKEDCLVCPT 170 (476)
T ss_pred ceEEEeeccC---ccCCCCCHHHHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHH--------CCCcEEEECC
Confidence 4689999998 778889999999999988763221 1112223578999999999 4567888888
Q ss_pred HHHHHHHHHHHh--------------cCCCCEEEecCCCccchHHHHhhC----CCeEEEeeccCCCCcccCHHHHHHhh
Q 014603 119 CTQAIEVILTVL--------------ARPGANILLPRPGFPYYEARATHS----HLEVRHFDLLPAKGWEVDLDAVEALA 180 (422)
Q Consensus 119 ~~~a~~~~~~~l--------------~~~gd~Vl~~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~d~~~l~~~~ 180 (422)
|..|+..++.++ ..++|.|++...+|.+....++.. +.+++.++. -|++.|++.+
T Consensus 171 Gy~AN~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f~H-------ND~~~Le~~L 243 (476)
T PLN02955 171 GFAANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQGNVEVFVYRH-------CDMYHLNSLL 243 (476)
T ss_pred hHHHHHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhccccCCceEEEeCC-------CCHHHHHHHH
Confidence 898988888876 245678889999999888888766 456665553 2778888776
Q ss_pred cC--CceEEEEeCC-CCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCC-CCCeEEEecCccc
Q 014603 181 DE--NTVALVIINP-GNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IVPVLTLGSISKR 256 (422)
Q Consensus 181 ~~--~~~~i~i~~p-~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~-~~~~i~i~s~sK~ 256 (422)
+. ....++++.+ .++.|.+.| +++|.++|++||+++|+||+|+.+.++..+......++. .+..++++||+|.
T Consensus 244 ~~~~~~~~~Vv~EgV~SmdGdiap---L~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~~di~ii~~TLsKA 320 (476)
T PLN02955 244 SSCKMKRKVVVTDSLFSMDGDFAP---MEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCEADVDLCVGTLSKA 320 (476)
T ss_pred HhCCCCceEEEEeCCCCCCCCcCC---HHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhCCCCCCcEEEEeCccc
Confidence 43 2234555665 788999865 777788888999999999999976664322222223322 2456999999999
Q ss_pred cCCCCceeEEEEeeCCCCcccchhHHHHHHhhhh--hccC-cchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHh
Q 014603 257 WIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN--ISSD-PATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRL 333 (422)
Q Consensus 257 ~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L 333 (422)
+|..| |+++++ +++++.++.... .+++ .++....++.++++.... -...++++.++.+++++.
T Consensus 321 ~G~~G---Gfi~gs--------~~~~~~l~~~~~~~ifStalpp~~aaa~laal~l~~~--~~~~r~~L~~n~~~fr~~- 386 (476)
T PLN02955 321 AGCHG---GFIACS--------KKWKQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVARK--EKWRRKAIWERVKEFKAL- 386 (476)
T ss_pred hhccC---ceeecH--------HHHHHHHHHhCCCCeecccccHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHh-
Confidence 87777 999886 357777765432 1223 333444455555554221 123567777888777763
Q ss_pred hcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCC---CeEEEEec--cChHHHHHHH
Q 014603 334 KEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLK---DWLRITFA--VEPSALEDGL 408 (422)
Q Consensus 334 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~---~~iRis~~--~~~~~l~~~~ 408 (422)
. ++. . + ..++.+.+.... ...++..+| .+.||.+.+..++..+ ..+||+++ ++++||++++
T Consensus 387 --~-G~~-~--~--sPI~pI~ig~~~-----~a~~~~~~L-~~~Gi~v~~i~yPtVP~g~~rLRi~lsA~Ht~edId~lv 452 (476)
T PLN02955 387 --S-GVD-I--S--SPIISLVVGNQE-----KALKASRYL-LKSGFHVMAIRPPTVPPNSCRLRVTLSAAHTTEDVKKLI 452 (476)
T ss_pred --c-CCC-C--C--CCEEEEEeCCHH-----HHHHHHHHH-HHCCCEEEEECCCCCCCCCceEEEeeCCCCCHHHHHHHH
Confidence 2 444 2 1 334444444321 244555655 5669999988777653 46999997 8999999999
Q ss_pred HHHHHHHHHh
Q 014603 409 GRMKAFYDRH 418 (422)
Q Consensus 409 ~~l~~~~~~~ 418 (422)
+.|.++.+..
T Consensus 453 ~~L~~~~~~~ 462 (476)
T PLN02955 453 TALSSCLDFD 462 (476)
T ss_pred HHHHHHHhhh
Confidence 9999876543
No 204
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.94 E-value=5.7e-24 Score=199.96 Aligned_cols=282 Identities=17% Similarity=0.168 Sum_probs=199.2
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHH----HHhhCCCeEEEe
Q 014603 86 TVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEA----RATHSHLEVRHF 161 (422)
Q Consensus 86 ~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~----~~~~~g~~~~~~ 161 (422)
.+...++++.++++.+ .+..+++++|++|+..++.+++++||+|+++.++|++... .+...|.++..+
T Consensus 39 ~p~~~~le~~la~l~g--------~~~a~~~~sG~~Ai~~~l~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v 110 (369)
T cd00614 39 NPTVDALEKKLAALEG--------GEAALAFSSGMAAISTVLLALLKAGDHVVASDDLYGGTYRLFERLLPKLGIEVTFV 110 (369)
T ss_pred ChhHHHHHHHHHHHHC--------CCCEEEEcCHHHHHHHHHHHHcCCCCEEEECCCCcchHHHHHHHHHhhcCeEEEEe
Confidence 4557899999999873 3567888899999999999999999999999999987643 344667777776
Q ss_pred eccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCcccc
Q 014603 162 DLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF 241 (422)
Q Consensus 162 ~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~ 241 (422)
+.+ |++.+++.++++++++++.+|+||+|.+. ++++|.++|+++|+++|+|++|+...+ ..++ .+
T Consensus 111 ~~~-------d~~~l~~~i~~~~~~v~~e~~~np~g~~~---dl~~i~~la~~~g~~livD~t~~~~~~----~~~~-~~ 175 (369)
T cd00614 111 DPD-------DPEALEAAIKPETKLVYVESPTNPTLKVV---DIEAIAELAHEHGALLVVDNTFATPYL----QRPL-EL 175 (369)
T ss_pred CCC-------CHHHHHHhcCCCCeEEEEECCCCCCCeec---CHHHHHHHHHHcCCEEEEECCCcchhc----CChh-hh
Confidence 532 57889998888899999999999999995 478889999999999999999875332 1111 22
Q ss_pred CCCCCeEEEecCccccCCCC-ceeEEEEeeCCCCcccchhHHHHHHhhhh-hccCcchHHHHHHHHHHhhchHHHHHHHH
Q 014603 242 GSIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQGAVPQILEKTEEEFFSKIT 319 (422)
Q Consensus 242 ~~~~~~i~i~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~ 319 (422)
+. .+++.|++|.++++| .+.|++++++ +++.+++..... .....++..++++...|+. +..+.
T Consensus 176 g~---Divv~S~tK~l~g~~~~~gG~v~~~~-------~~l~~~l~~~~~~~g~~~~p~~a~~~l~~l~t-----l~~r~ 240 (369)
T cd00614 176 GA---DIVVHSATKYIGGHSDVIAGVVVGSG-------EALIQRLRFLRLALGTILSPFDAWLLLRGLKT-----LPLRM 240 (369)
T ss_pred CC---cEEEeccceeccCCCCceEEEEEeCc-------HHHHHHHHHHHHhhCCCCCHHHHHHHHcCCCC-----HHHHH
Confidence 33 388999999988766 7889999853 257777766543 2335566666666556653 45567
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCCC----------------CCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEE-e
Q 014603 320 DILRETADICCDRLKEIPCITCPKKP----------------EGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIV-L 382 (422)
Q Consensus 320 ~~~~~~~~~l~~~L~~~~~~~~~~~~----------------~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v-~ 382 (422)
++..++.+.+.+.|+++|.+..+..| ..|..+.+.++. +.+.+..+++...+.. .
T Consensus 241 ~~~~~na~~la~~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~~--------~~~~~~~f~~~l~~~~~~ 312 (369)
T cd00614 241 ERHSENALKVAEFLEKHPKVERVYYPGLPSHPQHELAKKQMSGYGGVFSFELKG--------GLEAAKKFLNALKLFSLA 312 (369)
T ss_pred HHHHHHHHHHHHHHHcCCCccEEECCCCCCCchHHHHHHhcCCCceEEEEEeCC--------CHHHHHHHHHcCCcceEc
Confidence 77888999999999998776534344 134555566642 1222334444444431 1
Q ss_pred c--CC------------CC----------CC-CCeEEEEeccChHHHHHHHHHHHHHH
Q 014603 383 P--GI------------TV----------GL-KDWLRITFAVEPSALEDGLGRMKAFY 415 (422)
Q Consensus 383 ~--g~------------~~----------~~-~~~iRis~~~~~~~l~~~~~~l~~~~ 415 (422)
+ |. .. +. ++.+|+|++. |+.+.++..|++++
T Consensus 313 ~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~liR~svGl--E~~~dl~~dl~~al 368 (369)
T cd00614 313 VSLGGVESLVEHPASMTHSQLPPEERAAAGITPGLVRLSVGI--EDVEDLIADLEQAL 368 (369)
T ss_pred ccCCCCceeeeCCcccccccCCHHHHHhcCCCCCeEEEEeCc--CCHHHHHHHHHHhh
Confidence 0 11 10 11 3689999997 46777777777765
No 205
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.94 E-value=1.5e-23 Score=195.92 Aligned_cols=244 Identities=16% Similarity=0.134 Sum_probs=178.1
Q ss_pred CCCcHHHHHHHHHHhhCCCCCCCCC--CCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEE
Q 014603 61 FRTASVAVDAIVHSVRSARFNCYSS--TVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANIL 138 (422)
Q Consensus 61 ~~~~~~v~~a~~~~~~~~~~~~y~~--~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl 138 (422)
++.++++.++...... ....|.. ......||++++++.+ .+++++++|+++|+..++.+++++||+|+
T Consensus 35 ~~~~~~~~~~~~~~~~--~~~~Y~r~~npt~~~Le~~iA~le~--------~~~~~~~~sG~~Ai~~~l~all~~GD~Vv 104 (394)
T PRK09028 35 FDTVAEMRHAAKNRAN--GEMFYGRRGTPTHFAFQAAIVELEG--------GAGTALYPSGAAAISNALLSFLKAGDHLL 104 (394)
T ss_pred cCCHHHHHHHhccCcc--CCceecCCCCchHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCCCEEE
Confidence 4555566555433211 1134655 2345799999998862 24789999999999999999999999999
Q ss_pred ecCCCccchHHHH----hhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHH
Q 014603 139 LPRPGFPYYEARA----THSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKK 214 (422)
Q Consensus 139 ~~~~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~ 214 (422)
+++|.|.++...+ ...|+++..++. .+.+.+++.++++++++++++|+||+|.+ .++++|+++|++
T Consensus 105 v~~~~Y~~t~~l~~~~l~~~Gi~v~~v~~-------~~~e~l~~~l~~~TklV~lespsNPtg~v---~dl~~I~~la~~ 174 (394)
T PRK09028 105 MVDSCYEPTRDLCDKILKGFGIETTYYDP-------MIGEGIRELIRPNTKVLFLESPGSITMEV---QDVPTLSRIAHE 174 (394)
T ss_pred EECCCcHHHHHHHHHhhhhcceEEEEECC-------CCHHHHHHhcCcCceEEEEECCCCCCCcH---HHHHHHHHHHHH
Confidence 9999997776433 446776665532 14577888888899999999999999888 789999999999
Q ss_pred cCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCC-CceeEEEEeeCCCCcccchhHHHHHHhhhh-hc
Q 014603 215 LGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVP-GWRLGWLVTSDPNGILQDSGIVDSIKSFLN-IS 292 (422)
Q Consensus 215 ~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~-G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 292 (422)
+|+++|+|++|+... ...++ .++.| +++.|.+|+++++ +.-.|+++.+ +++.+++..... ..
T Consensus 175 ~g~~lvvD~t~a~p~----~~~Pl-~~GaD---ivv~S~tK~l~Gh~d~~~G~~~~~--------~~~~~~l~~~~~~~G 238 (394)
T PRK09028 175 HDIVVMLDNTWASPI----NSRPF-EMGVD---ISIQAATKYIVGHSDVMLGTATAN--------EKHWDQLREHSYLMG 238 (394)
T ss_pred cCCEEEEECCccccc----cCCcc-ccCce---EEEEeCCeEecCCCCEEEEEEECC--------HHHHHHHHHHHHhcC
Confidence 999999999997521 11222 34444 9999999999665 4666766543 345555554432 33
Q ss_pred cCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 014603 293 SDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKP 345 (422)
Q Consensus 293 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 345 (422)
...++...+.+..-|+. +.-+.++..++...+.+.|+++|.+.-+.+|
T Consensus 239 ~~~~p~~a~l~~rgl~T-----L~lR~~~~~~na~~la~~L~~~p~v~~V~yP 286 (394)
T PRK09028 239 QCTSPDDVYLAMRGLRT-----LGVRLAQHEKNALKVANWLATRPEVDHVRHP 286 (394)
T ss_pred CCCCHHHHHHHHcccCc-----HHHHHHHHHHHHHHHHHHHhcCCCccEEECC
Confidence 46677777777776765 6778888899999999999998876544444
No 206
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.94 E-value=1.3e-23 Score=194.72 Aligned_cols=353 Identities=18% Similarity=0.150 Sum_probs=228.8
Q ss_pred ccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHH
Q 014603 41 KNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT 120 (422)
Q Consensus 41 ~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~ 120 (422)
..+|+.+|||.+|...... -..+|.|.+|+.+++.......+... ..+....+++.|.+..+.. ..+.++++++|+
T Consensus 52 DvdG~~ylDf~sgi~v~~~-GH~hP~Vv~Av~~q~~~~~h~~~~~~--~~e~~v~~ae~L~~~~p~~-~~~~~~f~~sGa 127 (447)
T COG0160 52 DVDGNEYLDFLSGIAVLNL-GHNHPRVVEAVKRQLAKLNHTHTRDL--YYEPYVELAEKLTALAPGS-GLKKVFFGNSGA 127 (447)
T ss_pred eCCCCEEEEcccCcchhcc-CCCCHHHHHHHHHHHHHhhcccCCcc--cchhHHHHHHHHHHhCCcc-cCCeEEecCCcH
Confidence 3469999999997655423 25689999999999886432222221 1144555555555433211 457899999999
Q ss_pred HHHHHHHHHhc--CCCCEEEecCCCccchHHHHhhC-C-------------CeEEEeeccCC--CCcc--------cCHH
Q 014603 121 QAIEVILTVLA--RPGANILLPRPGFPYYEARATHS-H-------------LEVRHFDLLPA--KGWE--------VDLD 174 (422)
Q Consensus 121 ~a~~~~~~~l~--~~gd~Vl~~~~~~~~~~~~~~~~-g-------------~~~~~~~~~~~--~~~~--------~d~~ 174 (422)
+|++.+++... .....|+.....||+....+..+ + ..++.+|.... +.+. ...+
T Consensus 128 eA~E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~ 207 (447)
T COG0160 128 EAVEAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALE 207 (447)
T ss_pred HHHHHHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHHH
Confidence 99999987642 23478999999998764433322 2 12334443211 1111 1223
Q ss_pred HHHHhhc-----CCceEEEEeCC-CCCccc-ccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCe
Q 014603 175 AVEALAD-----ENTVALVIINP-GNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPV 247 (422)
Q Consensus 175 ~l~~~~~-----~~~~~i~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (422)
.++..+. ....+.+|..| +...|. +.|.+.++++.++|++||+++|+||+|.++.++|+ ...++..+..+++
T Consensus 208 ~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG~-~fa~E~~gv~PDi 286 (447)
T COG0160 208 YIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTGK-MFAFEHFGVEPDI 286 (447)
T ss_pred HHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccc-chhhhhcCCCCCE
Confidence 3444332 24466667777 666776 57778899999999999999999999999999994 4466666654444
Q ss_pred EEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHH
Q 014603 248 LTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETAD 327 (422)
Q Consensus 248 i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~ 327 (422)
++ ++|.++. |+++|.++++ +++++........++..|+++++++.+.|+..+++ .+.++..+.-+
T Consensus 287 vt---~aK~ig~-G~Pl~avv~r--------~ei~~~~~g~~~~Tf~GNpva~Aaa~AvL~vie~e---~L~~~a~~~G~ 351 (447)
T COG0160 287 VT---LAKSLGG-GLPLSAVVGR--------AEIMDWPPGGHGGTFGGNPVACAAALAVLDVIEEE---NLLERAAELGE 351 (447)
T ss_pred EE---ecccccC-CCceeEEecc--------HHhcccCCcccCCCCCcCHHHHHHHHHHHHHHHHc---cHHHHHHHHHH
Confidence 44 4799655 9999999986 56766333444556788999999999999865433 33344444444
Q ss_pred HHHHHhh----cCCCCCCCCCCCCceEEEEecCcccc---cCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--
Q 014603 328 ICCDRLK----EIPCITCPKKPEGSMFVMVKLNYSLL---EGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA-- 398 (422)
Q Consensus 328 ~l~~~L~----~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~-- 398 (422)
++++.|+ +.|.+. - ...-|.++.+.+..... +.......+..+ +.++|+.+..+..+ .+.+||.+.
T Consensus 352 ~l~~~L~~l~~~~~~Ig-d-VRG~Glm~giE~v~d~~t~~p~~~~~~~i~~~-~~~~Glil~~~G~~--~nviRi~PPL~ 426 (447)
T COG0160 352 YLRDRLEELQEKHPLIG-D-VRGLGLMIGVELVKDRDTKEPDAELAAKIVAR-AFERGLLLLTCGPH--GNVLRILPPLT 426 (447)
T ss_pred HHHHHHHHHHhhcCcee-c-ccccceEEEEEEecCCCCCCCCHHHHHHHHHH-HHHcCCEEeccCCC--CcEEEEeCCcc
Confidence 4444444 344333 1 23337788887754211 000112344444 45679888775533 589999997
Q ss_pred cChHHHHHHHHHHHHHHHHh
Q 014603 399 VEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 399 ~~~~~l~~~~~~l~~~~~~~ 418 (422)
.+++++++++++|.+++++.
T Consensus 427 is~e~~d~~l~il~~al~~~ 446 (447)
T COG0160 427 ISDEELDEGLDILEEALKEA 446 (447)
T ss_pred cCHHHHHHHHHHHHHHHHhh
Confidence 68999999999999999764
No 207
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.94 E-value=8e-24 Score=199.47 Aligned_cols=222 Identities=21% Similarity=0.203 Sum_probs=162.4
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHh----hCCCeEEEe
Q 014603 86 TVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARAT----HSHLEVRHF 161 (422)
Q Consensus 86 ~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~----~~g~~~~~~ 161 (422)
.....+++++++++.+. +..+++++|++|+..++.+++++||+|+++.|+|.+...... ..|+++..+
T Consensus 60 ~p~~~~Le~~lA~~~g~--------~~~i~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~~ 131 (388)
T PRK07811 60 NPTRTALEEQLAALEGG--------AYGRAFSSGMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTPV 131 (388)
T ss_pred CccHHHHHHHHHHHhCC--------CceEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHHHHhCcCCCeEEEEe
Confidence 35688999999999842 234555677999999999999999999999999986433222 246666555
Q ss_pred eccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCcccc
Q 014603 162 DLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF 241 (422)
Q Consensus 162 ~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~ 241 (422)
+. .|++++++.++++++++++++|+||+|.. .++++|.++|+++|+++|+|++|+..... .++ ..
T Consensus 132 d~-------~d~e~l~~~i~~~tklV~ie~p~NPtg~~---~dl~~I~~la~~~gi~lIvD~a~a~~~~~----~p~-~~ 196 (388)
T PRK07811 132 DL-------SDLDAVRAAITPRTKLIWVETPTNPLLSI---TDIAALAELAHDAGAKVVVDNTFASPYLQ----QPL-AL 196 (388)
T ss_pred CC-------CCHHHHHHhcCcCCeEEEEECCCCCccee---cCHHHHHHHHHHcCCEEEEECCCCccccC----Cch-hh
Confidence 42 48899999998899999999999999988 67899999999999999999999763321 122 12
Q ss_pred CCCCCeEEEecCccccCCCC-ceeEEEEeeCCCCcccchhHHHHHHhhhhh-ccCcchHHHHHHHHHHhhchHHHHHHHH
Q 014603 242 GSIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQGAVPQILEKTEEEFFSKIT 319 (422)
Q Consensus 242 ~~~~~~i~i~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~ 319 (422)
+.+ +++.|++|.++++| .+.||+++++ +++.+++...... ....++..++.+...|+. +..+.
T Consensus 197 gaD---ivv~S~sK~l~g~~~~~gG~vv~~~-------~~l~~~~~~~~~~~g~~~s~~~a~l~~~~L~t-----l~~R~ 261 (388)
T PRK07811 197 GAD---VVVHSTTKYIGGHSDVVGGALVTND-------EELDEAFAFLQNGAGAVPGPFDAYLTLRGLKT-----LAVRM 261 (388)
T ss_pred CCc---EEEecCceeecCCCCcEEEEEEECC-------HHHHHHHHHHHHhcCCCCCHHHHHHHHhccCc-----HHHHH
Confidence 333 89999999998754 5679988764 3566666554433 224445555544444543 56667
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCCC
Q 014603 320 DILRETADICCDRLKEIPCITCPKKP 345 (422)
Q Consensus 320 ~~~~~~~~~l~~~L~~~~~~~~~~~~ 345 (422)
++..++.+.+.+.|+++|.+..+.+|
T Consensus 262 ~~~~~na~~la~~L~~~p~v~~V~yP 287 (388)
T PRK07811 262 DRHSENAEAVAEFLAGHPEVSTVLYP 287 (388)
T ss_pred HHHHHHHHHHHHHHHhCCCeeEEECC
Confidence 77788899999999988776533344
No 208
>PRK06460 hypothetical protein; Provisional
Probab=99.94 E-value=8.1e-24 Score=198.61 Aligned_cols=221 Identities=16% Similarity=0.158 Sum_probs=157.2
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCcc----chHHHHhhCCCeEEEe
Q 014603 86 TVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFP----YYEARATHSHLEVRHF 161 (422)
Q Consensus 86 ~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~----~~~~~~~~~g~~~~~~ 161 (422)
.....+++++++++++ .+ ..++ +++|++++..++.+++++||+|+++.+.|. .+...++..|+++..+
T Consensus 44 ~p~~~~L~~~lA~l~g------~~-~~v~-~~sG~~ai~~~l~al~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~~ 115 (376)
T PRK06460 44 NPTVLELTKKIVELEN------AE-MGVA-FSSGMGAISTTALALLKPGNSVLVHRDMFGRSYRFFTDYLKNWGVNVDAS 115 (376)
T ss_pred CccHHHHHHHHHHHhC------CC-cEEE-eCCHHHHHHHHHHHHhCCCCEEEEecCCcCcHHHHHHHHHHhhCcEEEEE
Confidence 3567899999999983 32 3444 466679999999999999999999986553 4456677788888776
Q ss_pred eccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCcccc
Q 014603 162 DLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF 241 (422)
Q Consensus 162 ~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~ 241 (422)
+.+ +.+.+++.++++++++++++|+||||.+++. ++|.++|+++|+++|+|++|.... ...++ ..
T Consensus 116 ~~~-------~~~~l~~~~~~~tklV~l~sp~NPtG~v~d~---~~I~~la~~~g~~vivDea~~~~~----~~~~l-~~ 180 (376)
T PRK06460 116 NPG-------SDNIIEKAKSKRYDVVFVENITNPLLRVVDI---TELSKVCKENGSILIVDATFSTPI----NQKPL-EL 180 (376)
T ss_pred CCC-------CHHHHHHhcCCCceEEEEECCCCCCCcccCH---HHHHHHHHHcCCEEEEECCcCccc----cCChh-hc
Confidence 642 2234555556789999999999999999764 567888889999999999987521 11111 11
Q ss_pred CCCCCeEEEecCccccCCC-CceeEEEEeeCCCCcccchhHHHHHHhhhhhcc-CcchHHHHHHHHHHhhchHHHHHHHH
Q 014603 242 GSIVPVLTLGSISKRWIVP-GWRLGWLVTSDPNGILQDSGIVDSIKSFLNISS-DPATFIQGAVPQILEKTEEEFFSKIT 319 (422)
Q Consensus 242 ~~~~~~i~i~s~sK~~~~~-G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~ 319 (422)
+ ..+++.|+||+|++. +.++||++++ +++++++.......+ +.++... ..+++. ..+++.+.
T Consensus 181 ~---~divv~S~sK~l~G~~~~~~G~~~~~--------~~l~~~l~~~~~~~g~~~~~~~a---~~~l~~--~~~l~~r~ 244 (376)
T PRK06460 181 G---ADIVVHSASKFLAGHNDVIAGLAAGY--------GKLLNVIDQMRRTLGTSLDPHAA---YLTLRG--IKTLKIRM 244 (376)
T ss_pred C---CCEEEeecceeccCCCCceEEEEecC--------HHHHHHHHHHHHhcCCCCCHHHH---HHHHhc--hhhHHHHH
Confidence 2 348999999998643 3789999875 467787776554332 3333222 223332 35678888
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCCC
Q 014603 320 DILRETADICCDRLKEIPCITCPKKP 345 (422)
Q Consensus 320 ~~~~~~~~~l~~~L~~~~~~~~~~~~ 345 (422)
+++.++++.+.+.|+++|.+..+..|
T Consensus 245 ~~~~~n~~~l~~~L~~~p~v~~v~yp 270 (376)
T PRK06460 245 DVINRNAEQIAEFLEGHPKVVKVYYP 270 (376)
T ss_pred HHHHHHHHHHHHHHHcCCCccEEECC
Confidence 99999999999999988776534444
No 209
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.94 E-value=7.2e-24 Score=200.63 Aligned_cols=215 Identities=20% Similarity=0.222 Sum_probs=160.6
Q ss_pred CCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccch----HHHHhhCCCeEEEee
Q 014603 87 VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYY----EARATHSHLEVRHFD 162 (422)
Q Consensus 87 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~----~~~~~~~g~~~~~~~ 162 (422)
+...++++.++++.+ . +..+++++|++|+..++.+++++||+|+++.+.|... ...+...|++++.++
T Consensus 65 p~~~~le~~lA~l~g------~--~~~i~~~sG~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v~~vd 136 (403)
T PRK07503 65 PTLALLEQRMASLEG------G--EAAVALASGMGAITATLWTLLRPGDEVIVDQTLYGCTFAFLHHGLGEFGVTVRHVD 136 (403)
T ss_pred chHHHHHHHHHHHhC------C--CcEEEEcCHHHHHHHHHHHHcCCCCEEEEccCccchHHHHHHHHHhhCCEEEEEeC
Confidence 357899999999883 2 3457777889999999999999999999999988653 234456788877776
Q ss_pred ccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccC
Q 014603 163 LLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG 242 (422)
Q Consensus 163 ~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~ 242 (422)
. .|++.+++.++++++++++++|+||+|.+. ++++|.++|+++|+++|+|++|+.... + .++ .++
T Consensus 137 ~-------~d~~~l~~~i~~~tklV~le~p~NPtG~~~---di~~I~~la~~~gi~lIvD~a~a~~~~-~---~~l-~~g 201 (403)
T PRK07503 137 L-------TDPAALKAAISDKTRMVYFETPANPNMRLV---DIAAVAEIAHGAGAKVVVDNTYCTPYL-Q---RPL-ELG 201 (403)
T ss_pred C-------CCHHHHHHhcCccCcEEEEeCCCCCCCeee---CHHHHHHHHHHcCCEEEEECCCccccc-C---Cch-hhC
Confidence 4 278899999988999999999999999985 578889999999999999999975321 1 122 223
Q ss_pred CCCCeEEEecCccccCCCC-ceeEEEEeeCCCCcccchhHHHHHHhh--hh-hccCcchHHHHHHHHHHhhchHHHHHHH
Q 014603 243 SIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKSF--LN-ISSDPATFIQGAVPQILEKTEEEFFSKI 318 (422)
Q Consensus 243 ~~~~~i~i~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~ 318 (422)
.+ +++.|++|.++++| .+.|+++.+ +++.++++.. .. .....+++.++.+...|+. +..+
T Consensus 202 ~D---i~v~S~tK~l~g~gd~~gG~v~~~--------~~l~~~l~~~~~~~~~g~~~s~~~a~l~l~~L~t-----l~~r 265 (403)
T PRK07503 202 AD---LVVHSATKYLGGHGDITAGLVVGG--------KALADRIRLEGLKDMTGAVMSPFDAFLLMRGLKT-----LALR 265 (403)
T ss_pred CC---EEEccccccccCCCceeEEEEEcC--------HHHHHHHHhhhHHhCcCCCCCHHHHHHHHcCcch-----HHHH
Confidence 32 88999999998866 778888853 4677777633 22 2335566666665555543 5556
Q ss_pred HHHHHHHHHHHHHHhhcCCCCC
Q 014603 319 TDILRETADICCDRLKEIPCIT 340 (422)
Q Consensus 319 ~~~~~~~~~~l~~~L~~~~~~~ 340 (422)
.++..++...+.+.|+++|.+.
T Consensus 266 ~~~~~~na~~~a~~L~~~p~v~ 287 (403)
T PRK07503 266 MDRHCASAQAVAEWLARHPAVE 287 (403)
T ss_pred HHHHHHHHHHHHHHHHhCCCcc
Confidence 6666788888888898887655
No 210
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.94 E-value=9.2e-24 Score=197.64 Aligned_cols=221 Identities=16% Similarity=0.175 Sum_probs=168.5
Q ss_pred CCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHH----HhhCCCeEEEee
Q 014603 87 VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEAR----ATHSHLEVRHFD 162 (422)
Q Consensus 87 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~----~~~~g~~~~~~~ 162 (422)
.....|++++|++. ..+++++++|+++|+..++.+++++||+|+++.|+|.+.... ....|+++..++
T Consensus 53 pt~~~Le~~lA~le--------g~e~ivvt~gg~~Ai~~~l~all~~Gd~Il~~~~~y~~~~~~~~~~~~~~gi~v~~vd 124 (388)
T PRK08861 53 PNRGLLEQTLSELE--------SGKGAVVTNCGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLFNTRANKGDFKVQFVD 124 (388)
T ss_pred chHHHHHHHHHHHh--------CCCeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCchHHHHHHHHHHHhcCCeEEEEEC
Confidence 45789999999998 357999999999999999999999999999999999864332 223456666553
Q ss_pred ccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccC
Q 014603 163 LLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG 242 (422)
Q Consensus 163 ~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~ 242 (422)
. .|++.+++.++++++++++++|+||||.+++ +++|.++|+++|+++|+|++|....+. .++ .++
T Consensus 125 ~-------~d~e~l~~~i~~~tklV~lesP~NPtG~v~d---l~~I~~la~~~gi~vIvDea~~~~~~~----~pl-~~G 189 (388)
T PRK08861 125 Q-------SDAAALDAALAKKPKLILLETPSNPLVRVVD---IAELCQKAKAVGALVAVDNTFLTPVLQ----KPL-ELG 189 (388)
T ss_pred C-------CCHHHHHHhcCcCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCccccccC----CCc-ccC
Confidence 1 4789999988889999999999999999975 667788888999999999999753321 122 234
Q ss_pred CCCCeEEEecCccccCCC-CceeEEEEeeCCCCcccchhHHHHHHhhhhh-ccCcchHHHHHHHHHHhhchHHHHHHHHH
Q 014603 243 SIVPVLTLGSISKRWIVP-GWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQGAVPQILEKTEEEFFSKITD 320 (422)
Q Consensus 243 ~~~~~i~i~s~sK~~~~~-G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 320 (422)
.| +++.|++|.++++ +...|++++++ +++.++++..... ....++...+.+..-|+. +.-+.+
T Consensus 190 aD---ivv~S~tK~l~G~~d~~gG~i~~~~-------~~~~~~~~~~~~~~G~~~~p~~a~l~~rgl~T-----l~lR~~ 254 (388)
T PRK08861 190 AD---FVIHSTTKYINGHSDVIGGVLITKT-------KEHAEELAWWGNCIGATGTPFDSYMTLRGIRT-----LGARMR 254 (388)
T ss_pred CC---EEEeecceeccCCCcceeEEEEecH-------HHHHHHHHHHHhccCCCCChHHHHHHHhcCCC-----HHHHHH
Confidence 43 8999999998764 47789888753 3566666654433 345677777777777765 677778
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCC
Q 014603 321 ILRETADICCDRLKEIPCITCPKKP 345 (422)
Q Consensus 321 ~~~~~~~~l~~~L~~~~~~~~~~~~ 345 (422)
+..++...+.+.|+.+|.+.-+.+|
T Consensus 255 ~~~~~a~~~a~~L~~~p~v~~V~yP 279 (388)
T PRK08861 255 VHEESAQQILAYLQTQSLVGTIYHP 279 (388)
T ss_pred HHHHHHHHHHHHHHhCCCeeEEECC
Confidence 8888999999999988776434344
No 211
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.94 E-value=2.8e-23 Score=200.94 Aligned_cols=341 Identities=14% Similarity=0.093 Sum_probs=225.2
Q ss_pred eecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCC---CCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHH
Q 014603 49 PLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYS---STVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEV 125 (422)
Q Consensus 49 ~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~---~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~ 125 (422)
.++.|.+. ...+|.+.+++.+...-...+.|. ...|..+++..+.+++.+.+|. +...+..++|+++.+..
T Consensus 72 ~~g~G~~~----~~~~p~i~~~~~~~~~~~~~tpYq~e~~sqG~lel~~~~~~~la~l~G~--~~~~l~~~~GA~a~~~~ 145 (481)
T PRK04366 72 FYPLGSCT----MKYNPKINEKVARLPGFAELHPLQPEETVQGALELMYELQEWLKEITGM--DAVTLQPAAGAHGELTG 145 (481)
T ss_pred eecCcccC----CCCCHHHHHHHHhCcchhcCCCCCChhhhhHHHHHHHHHHHHHHHHhCC--CceEEEeCcHHHHHHHH
Confidence 35556544 467788888888752112345673 3567888888888888887764 33344444555555443
Q ss_pred H--HH-HhcCCCC----EEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCccc
Q 014603 126 I--LT-VLARPGA----NILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGN 198 (422)
Q Consensus 126 ~--~~-~l~~~gd----~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~ 198 (422)
+ ++ .+.++|| +|+++.++|+.+...+...|++++.++.+ .++.+|++.|++.++++++++++++|+ |+|.
T Consensus 146 l~~~r~~~~~~Gd~~~~~Vlv~~~~hp~~~~~~~~~G~~vv~v~~~--~~~~~D~e~L~~~i~~~t~~V~v~~Pn-~tG~ 222 (481)
T PRK04366 146 LLMIRAYHEARGDTKRTEVIVPDSAHGTNPASAAMAGFKVVEIPSN--EDGLVDLEALKAAVGEDTAALMLTNPN-TLGL 222 (481)
T ss_pred HHHHHHHhhccCcCCCCEEEEcCCccHhHHHHHHHcCCEEEEeecC--CCCCcCHHHHHhhcccCCeEEEEeCCC-Cccc
Confidence 2 33 3456666 99999999999999999999999999874 346789999999998899999999988 8996
Q ss_pred ccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCC----CceeEEEEeeCCCC
Q 014603 199 VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVP----GWRLGWLVTSDPNG 274 (422)
Q Consensus 199 ~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~----G~r~G~~~~~~~~~ 274 (422)
. .+++++|+++|+++|+++++|+++..... +. .+...++.| ++++|.+|+|+.| |..+|++.+++
T Consensus 223 ~--~~dl~eI~~~a~~~gal~iVD~a~~~~~~-g~--~~~~~~GaD---~~~~~~hK~l~~P~g~Ggp~~G~l~~~~--- 291 (481)
T PRK04366 223 F--ERNILEIAEIVHEAGGLLYYDGANLNAIL-GK--ARPGDMGFD---VVHLNLHKTFSTPHGGGGPGSGPVGVKE--- 291 (481)
T ss_pred c--chHHHHHHHHHHHcCCEEEEEecChhhhc-cc--CCccccCCC---EEEEechhhcCCCCCCCCCCeeeeeehh---
Confidence 5 35799999999999999999999863211 21 123344544 8899999998654 45578887753
Q ss_pred cccchhHHHHHHhh--------------------hhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhh
Q 014603 275 ILQDSGIVDSIKSF--------------------LNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLK 334 (422)
Q Consensus 275 ~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~ 334 (422)
++.+.+... +....+.+.....++..++.....+.+++..++...+.+++.+.|+
T Consensus 292 -----~~~~~lp~~~v~~~g~~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~ 366 (481)
T PRK04366 292 -----ELAPFLPVPVVEKDGDRYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKARLK 366 (481)
T ss_pred -----hhHhhCCCCeeeccCCceeecccccccCCCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 233322100 0011122334445555556555567788888888888999999998
Q ss_pred cCCCCCCCCCCCCc-eEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCC-CCCeEEEEec--cChHHHHHHHHH
Q 014603 335 EIPCITCPKKPEGS-MFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVG-LKDWLRITFA--VEPSALEDGLGR 410 (422)
Q Consensus 335 ~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~-~~~~iRis~~--~~~~~l~~~~~~ 410 (422)
++..+. . +... .-+.+.++.....+. +..++..+| .++||.+....... ..+.+|++++ +++++|+.+++.
T Consensus 367 ~~~~~~-~--~~~~~~~~~~~~~~~~~~g~-~~~~v~~~L-~~~Gi~~~~~~~p~~~~~~l~is~~e~~t~edid~l~~~ 441 (481)
T PRK04366 367 DIYDLP-Y--DRPCMHEFVLSGKKLKETGV-RTLDIAKRL-LDYGFHPPTIYFPLIVPEALMIEPTETESKETLDAFIAA 441 (481)
T ss_pred hhCccc-C--CCCeeEEEEEECccccccCC-CHHHHHHHH-HHCCccCCccccccccCCeEEEcccCCCCHHHHHHHHHH
Confidence 863332 1 2111 112222221011111 466777776 45698865322212 2678999997 789999999999
Q ss_pred HHHHHHHhc
Q 014603 411 MKAFYDRHA 419 (422)
Q Consensus 411 l~~~~~~~~ 419 (422)
|+++.++..
T Consensus 442 l~~i~~~~~ 450 (481)
T PRK04366 442 MKQIAEEAK 450 (481)
T ss_pred HHHHHHHHH
Confidence 999887653
No 212
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.94 E-value=8.9e-24 Score=201.33 Aligned_cols=348 Identities=17% Similarity=0.187 Sum_probs=221.6
Q ss_pred cCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHH
Q 014603 42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ 121 (422)
Q Consensus 42 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 121 (422)
.+|+.++||..|......+ ..+|.+.+++.+++.+.....+.. ...+.+..+++.+....+ .-..+.++|+++|++
T Consensus 37 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~ql~~~~~~~~~~--~~~~~~~~la~~l~~~~p-~~~~~~~~f~~sGse 112 (421)
T PRK06777 37 VEGREYIDFAAGIAVLNTG-HRHPKVVAAVRQQLDQFTHTAYQI--VPYASYVTLAERINALAP-IDGPAKTAFFTTGAE 112 (421)
T ss_pred CCCCEEEEcccCHHhhccC-CCCHHHHHHHHHHHhhcccccccc--cCChHHHHHHHHHHHhCC-CCCCceEEEeCCcHH
Confidence 4689999998886543223 457899999999998642222211 112333444555543222 112468999999999
Q ss_pred HHHHHHHHhc--CCCCEEEecCCCccchHHHHhhC-CCe-------------EEEeeccCCCCc----ccCHHHHHHhhc
Q 014603 122 AIEVILTVLA--RPGANILLPRPGFPYYEARATHS-HLE-------------VRHFDLLPAKGW----EVDLDAVEALAD 181 (422)
Q Consensus 122 a~~~~~~~l~--~~gd~Vl~~~~~~~~~~~~~~~~-g~~-------------~~~~~~~~~~~~----~~d~~~l~~~~~ 181 (422)
|++.+++... ....+|+..+.+||+....+... +.. +..++. +.... ..+++.+++.+.
T Consensus 113 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~l~~~~~ 191 (421)
T PRK06777 113 AVENAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALY-PNELHGVSVEEALSSVERLFK 191 (421)
T ss_pred HHHHHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCC-CccccCcCHHHHHHHHHHHHH
Confidence 9999988542 12367999999999886554432 210 011111 11000 113556776664
Q ss_pred ----CCceEEEEeCC-CCCccc-ccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCcc
Q 014603 182 ----ENTVALVIINP-GNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISK 255 (422)
Q Consensus 182 ----~~~~~i~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK 255 (422)
++..+.++..| ++..|. ++|.+.+++|.++|++||+++|+||+|.++.++|.. .....++..+++ .++||
T Consensus 192 ~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g~~-~~~~~~~~~pDi---v~~sK 267 (421)
T PRK06777 192 ADIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGKL-FAMEYYDVKPDL---ITMAK 267 (421)
T ss_pred hccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCCch-hhhhhcCCCCCE---Eeeeh
Confidence 23455666677 667775 678999999999999999999999999998777753 233334333333 36899
Q ss_pred ccCCCCceeEEEEeeCCCCcccchhHHHHHHhhh-hhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhh
Q 014603 256 RWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLK 334 (422)
Q Consensus 256 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~ 334 (422)
.++ +|+|+||++++ +++++.+.... ..+.+.+++.++++.++|+...+ ++..++++++.+++++.|+
T Consensus 268 ~l~-~G~pigav~~~--------~~i~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~---~~l~~~~~~~g~~l~~~L~ 335 (421)
T PRK06777 268 SLG-GGMPISAVVGR--------AEVMDAPAPGGLGGTYAGNPLAVAAALAVLDVIAE---EKLCQRALILGAHLVEVLE 335 (421)
T ss_pred hhc-CCCceEEEEEc--------HHHHhccCCCCCCCCCCcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHH
Confidence 986 89999999986 46766665433 23457789999999999975432 3455666666667766666
Q ss_pred cC----CCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHH---HHhcCeEEecCCCCCCCCeEEEEec--cChHHHH
Q 014603 335 EI----PCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKL---AKEESVIVLPGITVGLKDWLRITFA--VEPSALE 405 (422)
Q Consensus 335 ~~----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~ 405 (422)
++ |.+. ...+.+. ++.+.+..... + ....++...+ +.++||.+.|+..++ +++|++++ .++++++
T Consensus 336 ~l~~~~~~i~-~vrg~G~-~~~i~~~~~~~-~-~~~~~~~~~l~~~~~~~Gv~i~~~~~~g--~~lr~~ppl~i~~~~i~ 409 (421)
T PRK06777 336 KAKASCPAIV-DIRARGS-MVAVEFNDPQT-G-KPSPEFTRQYQRQALEEGLLLLSCGVHG--NVIRFLYPLTIPDAQFS 409 (421)
T ss_pred HHHHhCCCeE-EecCceE-EEEEEEecCcc-C-CccHHHHHHHHHHHHhCCeEEeecCCCC--CEEEEeCCCCCCHHHHH
Confidence 53 4333 2245544 44444432100 0 0122222222 456799999986553 79999996 7899999
Q ss_pred HHHHHHHHHHH
Q 014603 406 DGLGRMKAFYD 416 (422)
Q Consensus 406 ~~~~~l~~~~~ 416 (422)
+++++|++++.
T Consensus 410 ~~~~~l~~~l~ 420 (421)
T PRK06777 410 KALNILTRLLA 420 (421)
T ss_pred HHHHHHHHHHh
Confidence 99999998874
No 213
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.94 E-value=1.9e-23 Score=196.92 Aligned_cols=327 Identities=16% Similarity=0.091 Sum_probs=205.6
Q ss_pred CCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCC-------CCCCC------CCCCCHHHHHHHHHHHhhcCCCCCCC
Q 014603 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSAR-------FNCYS------STVGILPARRAIADYLNRDLPYKLSP 110 (422)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~-------~~~y~------~~~g~~~lr~~ia~~l~~~~~~~~~~ 110 (422)
...+|+|++++ |.++..+|.+.+++.+++.... ....+ ....+.++|+.+|++++ . +
T Consensus 3 ~~~~~~~~s~~---YL~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~------~-~ 72 (370)
T PRK05937 3 ESLSIDFVTND---FLGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHG------A-P 72 (370)
T ss_pred CCceEEeECCC---ccCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhC------C-C
Confidence 35689999998 6677888888888877765421 11111 22347789999999983 2 2
Q ss_pred CCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhc------CCc
Q 014603 111 DDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALAD------ENT 184 (422)
Q Consensus 111 ~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~------~~~ 184 (422)
+.+++++|+ .++..+...+.++||.|++...+|.+....++......+.++ ..|++.|++.++ +.+
T Consensus 73 ~~l~~~sG~-~a~~~~~~~~~~~~d~ii~d~~~H~sv~~~~~~~~~~~~~~~-------~~d~~~l~~~l~~~~~~~~~~ 144 (370)
T PRK05937 73 EAFIVPSGY-MANLGLCAHLSSVTDYVLWDEQVHISVVYSLSVISGWHQSFR-------HNDLDHLESLLESCRQRSFGR 144 (370)
T ss_pred eEEEECChH-HHHHHHHHHhCCCCCEEEEEhhhhHHHHHHHHHcCCceEEec-------CCCHHHHHHHHHhhhccCCCc
Confidence 335555554 566666666677888988888899877776665433333332 147888888775 245
Q ss_pred eEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCcee
Q 014603 185 VALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRL 264 (422)
Q Consensus 185 ~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~ 264 (422)
.++++++++|++|.+.| +++|.++|+++|+++++|++|+...+..........++..+..+.+.|+||.+|..| .
T Consensus 145 ~~v~v~~v~s~~G~i~p---l~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~g~~G--~ 219 (370)
T PRK05937 145 IFIFVCSVYSFKGTLAP---LEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKALGSMG--A 219 (370)
T ss_pred EEEEEecCCCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCcEEEEechhhhhcCc--e
Confidence 56678899999999965 778888899999999999999863332111100111222222366889999988777 3
Q ss_pred EEEEeeCCCCcccchhHHHHHHhh---hhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCC
Q 014603 265 GWLVTSDPNGILQDSGIVDSIKSF---LNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITC 341 (422)
Q Consensus 265 G~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 341 (422)
| ++.. +++...+... ..+..+.++....++.++++...+.. +..+++++++++++.+.|+.. +
T Consensus 220 ~-vl~~--------~~~~~~~~~~~~~~~~s~~~~~~~~~a~~aal~~l~~~~-~~~~~~l~~l~~~l~~~l~~~-~--- 285 (370)
T PRK05937 220 A-LLSS--------SEVKQDLMLNSPPLRYSTGLPPHLLISIQVAYDFLSQEG-ELARKQLFRLKEYFAQKFSSA-A--- 285 (370)
T ss_pred E-EEcC--------HHHHHHHHHhCCCCeecCCCCHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHhcCCC-C---
Confidence 3 3332 2343433321 11223455666666666665432222 345677778888887776542 1
Q ss_pred CCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHHHHHHHHHhc
Q 014603 342 PKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGRMKAFYDRHA 419 (422)
Q Consensus 342 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~l~~~~~~~~ 419 (422)
+. ....+.++.. ...++... +.++||.+..... ...+++|+|++ ++++|++++++.|.++++++.
T Consensus 286 ---~~--~~~~i~~~~~------~~~~~~~~-L~~~gi~v~~~~~-~~~~~iRis~~~~~t~edid~l~~~L~~~~~~~~ 352 (370)
T PRK05937 286 ---PG--CVQPIFLPGI------SEQELYSK-LVETGIRVGVVCF-PTGPFLRVNLHAFNTEDEVDILVSVLATYLEKYQ 352 (370)
T ss_pred ---CC--CEEEEEeCCh------hHHHHHHH-HHHCCeeEEeeCC-CCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHhC
Confidence 11 1111233321 34445444 4667998864321 22568999998 899999999999999998764
Q ss_pred c
Q 014603 420 K 420 (422)
Q Consensus 420 ~ 420 (422)
+
T Consensus 353 ~ 353 (370)
T PRK05937 353 K 353 (370)
T ss_pred C
Confidence 4
No 214
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.94 E-value=1.4e-23 Score=197.72 Aligned_cols=220 Identities=21% Similarity=0.272 Sum_probs=163.1
Q ss_pred CCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccch----HHHHhhCCCe
Q 014603 82 CYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYY----EARATHSHLE 157 (422)
Q Consensus 82 ~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~----~~~~~~~g~~ 157 (422)
+|+. ....++++.++++++ .+.+++++||++|+..++.+++++||+|+++.+.|.+. ...+...|.+
T Consensus 50 r~~~-p~~~~le~~la~l~g--------~~~~~~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~~ 120 (380)
T TIGR01325 50 RYAN-PTVAAFEERIAALEG--------AERAVATATGMSAIQAALMTLLQAGDHVVASRSLFGSTVGFISEILPRFGIE 120 (380)
T ss_pred cCCC-chHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEecCCcchHHHHHHHHHHHhCCE
Confidence 4443 347899999999872 25788899999999999999999999999999888653 3355667888
Q ss_pred EEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCC
Q 014603 158 VRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVP 237 (422)
Q Consensus 158 ~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~ 237 (422)
+..++.. |++.+++.++++++++++++|+||+|.+. ++++|.++|+++|+++|+|++|...... .+
T Consensus 121 v~~v~~~-------d~~~l~~~i~~~tklV~le~p~np~g~~~---dl~~I~~la~~~gi~livD~a~~~~~~~----~p 186 (380)
T TIGR01325 121 VSFVDPT-------DLNAWEAAVKPNTKLVFVETPSNPLGELV---DIAALAELAHAIGALLVVDNVFATPVLQ----QP 186 (380)
T ss_pred EEEECCC-------CHHHHHHhcCCCceEEEEECCCCCCCeee---CHHHHHHHHHHcCCEEEEECCCcccccC----Cc
Confidence 8777642 67889988888899999999999999995 6888899999999999999999753221 12
Q ss_pred ccccCCCCCeEEEecCccccCCCCcee-EEEEeeCCCCcccchhHHHHHHhhhhhc-cCcchHHHHHHHHHHhhchHHHH
Q 014603 238 MGVFGSIVPVLTLGSISKRWIVPGWRL-GWLVTSDPNGILQDSGIVDSIKSFLNIS-SDPATFIQGAVPQILEKTEEEFF 315 (422)
Q Consensus 238 ~~~~~~~~~~i~i~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~~l~~~~~~~~ 315 (422)
+ .++.+ +++.|++|.++++|.++ |+++++ +++.+.+....... ...++...+++...++. +
T Consensus 187 l-~~g~D---ivv~S~sK~l~g~g~~~gG~vv~~--------~~~~~~l~~~~~~~g~~~~p~~a~~~l~~l~t-----l 249 (380)
T TIGR01325 187 L-KLGAD---VVVYSATKHIDGQGRVMGGVIAGS--------EELMAEVAVYLRHTGPAMSPFNAWVLLKGLET-----L 249 (380)
T ss_pred h-hhCCC---EEEeeccceecCCCCeEEEEEEeC--------HHHHHHHHHHHHhhCCCCCHHHHHHHHhccCc-----H
Confidence 2 22333 88889999998888887 566654 35666666554322 23344554444444443 5
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCC
Q 014603 316 SKITDILRETADICCDRLKEIPCITC 341 (422)
Q Consensus 316 ~~~~~~~~~~~~~l~~~L~~~~~~~~ 341 (422)
..+.++..++++.+.+.|+++|.+..
T Consensus 250 ~~r~~~~~~~a~~la~~L~~~p~v~~ 275 (380)
T TIGR01325 250 SLRMQKQFDSALAIAEWLQAQPQVQA 275 (380)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCccE
Confidence 56777788888899999998877653
No 215
>PLN02624 ornithine-delta-aminotransferase
Probab=99.94 E-value=9.6e-24 Score=203.59 Aligned_cols=344 Identities=15% Similarity=0.131 Sum_probs=215.4
Q ss_pred cCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCC-CCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHH
Q 014603 42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNC-YSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT 120 (422)
Q Consensus 42 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~-y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~ 120 (422)
.+|..++||..|...... -..+|.|.+++.+++....... +.......++.+.+++++ ..+.++++++|+
T Consensus 72 ~dG~~ylD~~sg~~~~~~-Gh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~la~~L~~~~--------~~~~~~f~~SGs 142 (474)
T PLN02624 72 PEGKKYLDFLSAYSAVNQ-GHCHPKIIKALTEQAEKLTLSSRAFYNDKFPEFAEYLTSMF--------GYDMVLPMNTGA 142 (474)
T ss_pred CCCCEEEEcccchhcccC-CCCCHHHHHHHHHHHHhcCCcccccCCHHHHHHHHHHHhhc--------CCCeEEEeCChH
Confidence 358889999888654322 2458999999999998632211 111222345555555543 246899999999
Q ss_pred HHHHHHHHHhcC---------CC-CEEEecCCCccchHHHHhhCCCeE-EEe---eccCC---CCcccCHHHHHHhhc--
Q 014603 121 QAIEVILTVLAR---------PG-ANILLPRPGFPYYEARATHSHLEV-RHF---DLLPA---KGWEVDLDAVEALAD-- 181 (422)
Q Consensus 121 ~a~~~~~~~l~~---------~g-d~Vl~~~~~~~~~~~~~~~~g~~~-~~~---~~~~~---~~~~~d~~~l~~~~~-- 181 (422)
+|++.+++.... ++ ..|+....+|++....+....... ... |..+. -.+ -|++.+++.++
T Consensus 143 eA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~-~d~~~l~~~l~~~ 221 (474)
T PLN02624 143 EGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDF-GDLDALEKIFEED 221 (474)
T ss_pred HHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCC-CCHHHHHHHHHhC
Confidence 999999875432 12 368888888988754443322111 000 10000 001 26788888774
Q ss_pred -CCceEEEEeCCCCCcccccCHH-HHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCC
Q 014603 182 -ENTVALVIINPGNPCGNVYTYQ-HLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIV 259 (422)
Q Consensus 182 -~~~~~i~i~~p~nptG~~~~~~-~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~ 259 (422)
.+..++++..++|++|.++|++ .+++|.++|++||+++|+||+|.++.++|... .....+..++++ +++|.+++
T Consensus 222 ~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~GrtG~~~-a~~~~~i~pDiv---~lsK~lgg 297 (474)
T PLN02624 222 GDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLARTGKML-ACDWEEVRPDVV---ILGKALGG 297 (474)
T ss_pred CCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCcCcchh-hHHhcCCCCCEE---EecccccC
Confidence 2455666666799999987666 59999999999999999999999877766432 111122222233 35899987
Q ss_pred CCceeEEEEeeCCCCcccchhHHHHHHhhh-hhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhc---
Q 014603 260 PGWRLGWLVTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKE--- 335 (422)
Q Consensus 260 ~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~--- 335 (422)
+++++|+++.+ ++++..+.... ..+.+.+++.+.++.++|+...+.. ..++..++.+.+++.|++
T Consensus 298 G~~pigav~~~--------~~i~~~~~~~~~~~T~~g~pl~~aaa~aaLe~l~~~~---l~~~~~~~~~~l~~~L~~l~~ 366 (474)
T PLN02624 298 GVIPVSAVLAD--------KDVMLCIKPGEHGSTFGGNPLASAVAMAALQVVQDEK---LAERSAKLGQELRDQLQKIQK 366 (474)
T ss_pred CCCcceeeeec--------HHHHhHhccCCcCCCCCCCHHHHHHHHHHHHHHHhch---HHHHHHHHHHHHHHHHHHHHH
Confidence 77999999985 35666554333 2344678889999999887543222 223334444444444443
Q ss_pred -CCC-CCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHHH
Q 014603 336 -IPC-ITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGRM 411 (422)
Q Consensus 336 -~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~l 411 (422)
++. +. ...+. |.++.+.++.... +.....++...+ .++||.+.|+. .+++|++++ +++++|++++++|
T Consensus 367 ~~~~~i~-~vrg~-G~~~~i~l~~~~~-~~~~a~~~~~~L-~e~GV~v~p~~----~~~lR~~p~l~~t~e~id~~l~~L 438 (474)
T PLN02624 367 QFPKLIK-EVRGR-GLLNAVVLNSPKL-GPVSAYDVCLKL-KERGLLAKPTH----DTIIRLAPPLSISEDELQECSKAL 438 (474)
T ss_pred hCCCceE-EEEee-EEEEEEEecCCCc-ChHHHHHHHHHH-HhCCeEEecCC----CCEEEEECCccCCHHHHHHHHHHH
Confidence 332 22 11233 5555555543210 001244566654 66799998863 578999975 7899999999999
Q ss_pred HHHHHHh
Q 014603 412 KAFYDRH 418 (422)
Q Consensus 412 ~~~~~~~ 418 (422)
++++++.
T Consensus 439 ~~~l~~~ 445 (474)
T PLN02624 439 SDVLEHD 445 (474)
T ss_pred HHHHHHH
Confidence 9998764
No 216
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.94 E-value=8.2e-24 Score=201.99 Aligned_cols=333 Identities=14% Similarity=0.116 Sum_probs=216.5
Q ss_pred CCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCC---CCCC-CC-CC--CCCHHHHHHHHHHHhhcCCCCCCCCCEEEec
Q 014603 45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSA---RFNC-YS-ST--VGILPARRAIADYLNRDLPYKLSPDDVYLTL 117 (422)
Q Consensus 45 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~---~~~~-y~-~~--~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~ 117 (422)
+.+++|+++..+ +.|+.+.+++.+.+... .... +. .. ....+.++.+ +++ ++++++|++++
T Consensus 26 ~~~iyld~~a~g-----~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~------g~~~~~v~~~~ 93 (406)
T TIGR01814 26 NAVIYLDGNSLG-----LMPKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESLLKL-RLV------GAKEDEVVVMN 93 (406)
T ss_pred CCcEEecCCCcC-----cCcHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhhccc-ccc------CCCCCcEEEeC
Confidence 668999988744 44788888888766431 1101 11 11 1112222233 444 46789999999
Q ss_pred CHHHHHHHHHHHhcCCC---CEEEecCCCccch----HHHHhhCCCeEE--EeeccCCCCcccCHHHHHHhh---cCCce
Q 014603 118 GCTQAIEVILTVLARPG---ANILLPRPGFPYY----EARATHSHLEVR--HFDLLPAKGWEVDLDAVEALA---DENTV 185 (422)
Q Consensus 118 g~~~a~~~~~~~l~~~g---d~Vl~~~~~~~~~----~~~~~~~g~~~~--~~~~~~~~~~~~d~~~l~~~~---~~~~~ 185 (422)
|+|++++.++.++.+++ +.|++...+|++. ...++..|.+++ ...+....++.++++.+++.+ .++++
T Consensus 94 ~~t~~l~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~t~ 173 (406)
T TIGR01814 94 TLTINLHLLLASFYKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEPREEETLRLEDILDTIEKNGDDIA 173 (406)
T ss_pred CchHHHHHHHHHhcCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEeccCCCCccCHHHHHHHHHhcCCCeE
Confidence 99999999999876654 3688888899763 334456677762 122222334457888888876 36789
Q ss_pred EEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccC-CCCcee
Q 014603 186 ALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWI-VPGWRL 264 (422)
Q Consensus 186 ~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~-~~G~r~ 264 (422)
++++++++|.||..+ ++++|.++|+++|+++++|++|+. |..+..+...+.| +++.|.+|+++ +|| .
T Consensus 174 lv~~~~v~~~tG~~~---~~~~i~~~~~~~g~~~~vD~aq~~----G~~~id~~~~gvD---~~~~s~hK~l~g~pG--~ 241 (406)
T TIGR01814 174 VILLSGVQYYTGQLF---DMAAITRAAHAKGALVGFDLAHAV----GNVPLDLHDWGVD---FACWCTYKYLNAGPG--A 241 (406)
T ss_pred EEEEeccccccceec---CHHHHHHHHHHcCCEEEEEccccc----CCcccccccCCCC---EEEEcCccccCCCCC--e
Confidence 999999999999996 588888999999999999999987 4444455555554 89999999864 455 3
Q ss_pred EEEEeeCCCCcccchhHHHH----------------HHhhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHH
Q 014603 265 GWLVTSDPNGILQDSGIVDS----------------IKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADI 328 (422)
Q Consensus 265 G~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~ 328 (422)
|.++.++.. ....+.+... ........++++.....++.++++...+..++...++.+++.++
T Consensus 242 ~l~v~~~~~-~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~ 320 (406)
T TIGR01814 242 GAFVHEKHA-HTERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQAGMEALRKKSLLLTDY 320 (406)
T ss_pred EEEEehhhh-hhcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 333332110 0000000000 00000113467777878888888765455678888999999999
Q ss_pred HHHHhhcC----CCCCCCCCCC----CceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEe-c-
Q 014603 329 CCDRLKEI----PCITCPKKPE----GSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITF-A- 398 (422)
Q Consensus 329 l~~~L~~~----~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~-~- 398 (422)
+++.|+++ +++.+. .|. .+..+.+.++. +..++...| .++||.+... ..+.+|+|+ +
T Consensus 321 l~~~l~~~~~~~~~~~i~-~~~~~~~r~~~v~~~~~~-------~~~~~~~~L-~~~gi~v~~~----~~~~iRiS~~~~ 387 (406)
T TIGR01814 321 LEELIKARCGGPPVLTII-TPRDHAQRGCQLSLTHPV-------PGKAVFQAL-IKRGVIGDKR----EPSVIRVAPVPL 387 (406)
T ss_pred HHHHHHhhcCCCCceEEe-CCCChhhcCCeEEEEecC-------CHHHHHHHH-HHCCEEEecc----CCCeEEEechhc
Confidence 99998875 346533 332 12344455541 356666666 5669987532 246899998 4
Q ss_pred -cChHHHHHHHHHHHHHH
Q 014603 399 -VEPSALEDGLGRMKAFY 415 (422)
Q Consensus 399 -~~~~~l~~~~~~l~~~~ 415 (422)
++++|++++++.|++++
T Consensus 388 ~nt~~did~l~~~l~~~~ 405 (406)
T TIGR01814 388 YNTFVDVYDAVNVLEEIL 405 (406)
T ss_pred cCCHHHHHHHHHHHHHHh
Confidence 68999999999998765
No 217
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.94 E-value=1.3e-23 Score=197.99 Aligned_cols=220 Identities=17% Similarity=0.181 Sum_probs=162.1
Q ss_pred CCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccch----HHHHhhCCCeEEEee
Q 014603 87 VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYY----EARATHSHLEVRHFD 162 (422)
Q Consensus 87 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~----~~~~~~~g~~~~~~~ 162 (422)
+...+|++.+|++.+ .+..+++++|++|+..++.+++++||+|+++.+.|.+. ...+...|++++.++
T Consensus 59 p~~~~le~~lA~l~g--------~~~av~~~sG~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~~~~vd 130 (391)
T TIGR01328 59 PTVSNLEGRIAFLEG--------TEAAVATSSGMGAIAATLLTILKAGDHLISDECLYGCTFALLEHALTKFGIQVDFIN 130 (391)
T ss_pred chHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEecCcchHHHHHHHHHHhcCCeEEEEEC
Confidence 346789999999983 24578888889999999999999999999999988643 344455787877776
Q ss_pred ccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccC
Q 014603 163 LLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG 242 (422)
Q Consensus 163 ~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~ 242 (422)
.+ |++.+++.++++++++++++|+||+|.+. ++++|.++|+++|+++|+|++|..... + .++ ..+
T Consensus 131 ~~-------d~e~l~~~i~~~tklV~le~p~Np~G~v~---dl~~I~~la~~~gi~livD~a~a~~~~-~---~~~-~~g 195 (391)
T TIGR01328 131 MA-------IPEEVKAHIKDNTKIVYFETPANPTMKLI---DMERVCRDAHSQGVKVIVDNTFATPML-T---NPV-ALG 195 (391)
T ss_pred CC-------CHHHHHHhhccCCeEEEEECCCCCCCccc---CHHHHHHHHHHcCCEEEEECCCchhcc-C---Cch-hcC
Confidence 42 78899999888999999999999999996 477888889999999999999975322 1 122 122
Q ss_pred CCCCeEEEecCccccCCCCcee-EEEEeeCCCCcccchhHHHHHHhhhh--h-ccCcchHHHHHHHHHHhhchHHHHHHH
Q 014603 243 SIVPVLTLGSISKRWIVPGWRL-GWLVTSDPNGILQDSGIVDSIKSFLN--I-SSDPATFIQGAVPQILEKTEEEFFSKI 318 (422)
Q Consensus 243 ~~~~~i~i~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~a~~~~l~~~~~~~~~~~ 318 (422)
.+ +++.|++|.++++|.++ |+++++ ++++++++.... . ....++...+.+...|+. +..+
T Consensus 196 ~D---ivv~S~sK~lgg~g~~~gG~v~~~--------~~li~~l~~~~~~~~~g~~l~~~~a~l~l~~L~t-----l~~r 259 (391)
T TIGR01328 196 VD---VVVHSATKYIGGHGDVVAGLICGK--------AELLQQIRMVGIKDMTGSVISPFDAWLILRGLKT-----LNIR 259 (391)
T ss_pred CC---EEEccccccccCCCCceEEEEEcC--------HHHHHHHHHHHHHhCCCCCCCcHHHHHHHhCcCc-----HHHH
Confidence 22 88899999999888775 555543 467776664321 2 224455555555555543 4556
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 014603 319 TDILRETADICCDRLKEIPCITCPKKP 345 (422)
Q Consensus 319 ~~~~~~~~~~l~~~L~~~~~~~~~~~~ 345 (422)
.++..++.+.+.+.|+++|.+..+.+|
T Consensus 260 ~~~~~~na~~la~~L~~~p~v~~v~yp 286 (391)
T TIGR01328 260 MKRHSENAMKVAEYLKSHPAVEKVYYP 286 (391)
T ss_pred HHHHHHHHHHHHHHHHhCCCccEEECC
Confidence 777888899999999988776534343
No 218
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.93 E-value=5e-23 Score=196.69 Aligned_cols=351 Identities=16% Similarity=0.154 Sum_probs=217.3
Q ss_pred cCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHH
Q 014603 42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ 121 (422)
Q Consensus 42 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 121 (422)
.+|+.++||..|......+ ..+|.+.+++.+++.+.. .+.......+.+..+++.|.+..+ ...+.++|+++|++
T Consensus 38 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~Ai~~ql~~~~--~~~~~~~~~~~~~~la~~L~~~~p--~~~~~v~f~~sGsE 112 (443)
T PRK08360 38 IEGNEYIDFLSDAAVQNVG-HNNPRVVKAIKEQTDKLI--HYTPIYGFPVEPLLLAEKLIEIAP--GDNPKVSFGLSGSD 112 (443)
T ss_pred CCCCEEEEccccHhhcccC-CCCHHHHHHHHHHHHhcc--CccccccCcHHHHHHHHHHHHhCC--CCCCEEEEcCCHHH
Confidence 4689999999886553233 457899999999997632 122111122344455555544322 22358999999999
Q ss_pred HHHHHHHHhc--CCCCEEEecCCCccchHHHHhh-CCC------------eEEEeeccCCC--Ccc--------cCHHHH
Q 014603 122 AIEVILTVLA--RPGANILLPRPGFPYYEARATH-SHL------------EVRHFDLLPAK--GWE--------VDLDAV 176 (422)
Q Consensus 122 a~~~~~~~l~--~~gd~Vl~~~~~~~~~~~~~~~-~g~------------~~~~~~~~~~~--~~~--------~d~~~l 176 (422)
|++.+++... .....|+....+||+....+.. .+. .+..++..... .+. -+++.+
T Consensus 113 Ave~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (443)
T PRK08360 113 ANDGAIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYI 192 (443)
T ss_pred HHHHHHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHHHH
Confidence 9999988642 2236788889899887433222 121 11222211100 000 123445
Q ss_pred HHhhc----CCceEEEEeCC-CCCcccccC-HHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEE
Q 014603 177 EALAD----ENTVALVIINP-GNPCGNVYT-YQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTL 250 (422)
Q Consensus 177 ~~~~~----~~~~~i~i~~p-~nptG~~~~-~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i 250 (422)
++.+. .+..+.++..| +||+|.+++ .+.+++|.++|++||+++|+||+|.++.++|... ....++..++++
T Consensus 193 ~~~l~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G~~~-a~~~~~~~pDii-- 269 (443)
T PRK08360 193 KEKFEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTGKWF-AIEHFGVEPDII-- 269 (443)
T ss_pred HHHHHhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCccch-hhhhcCCCCCEE--
Confidence 55553 23345555667 699998776 5679999999999999999999999887777532 222233333333
Q ss_pred ecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhh-hhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHH
Q 014603 251 GSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADIC 329 (422)
Q Consensus 251 ~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l 329 (422)
++||.++ +|+|+|+++++ +++++.+.... ..+.+.+++.++++.++|+...+. +..++++++.+++
T Consensus 270 -tlsK~l~-~G~pigav~~~--------~~i~~~~~~~~~~~T~~~~p~~~aaa~a~l~~l~~~---~l~~~~~~~g~~l 336 (443)
T PRK08360 270 -TLGKPLG-GGLPISATIGR--------AEIMDSLPPLAHAFTLSGNPVASAAALAVIEEIEEK---NLLKRAEKLGNYT 336 (443)
T ss_pred -Eeccccc-CCceeEEEEEc--------HHHHhhhcCCCCCCCCCcCHHHHHHHHHHHHHHHHc---CHHHHHHHHHHHH
Confidence 5699976 89999999986 46777775442 334567888899999988864322 2334444444455
Q ss_pred HHHhhc----CCCCCCCCCCCCceEEEEecCcccc-cCC--CCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cC
Q 014603 330 CDRLKE----IPCITCPKKPEGSMFVMVKLNYSLL-EGI--NSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VE 400 (422)
Q Consensus 330 ~~~L~~----~~~~~~~~~~~~g~~~~~~~~~~~~-~~~--~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~ 400 (422)
++.|++ .|.+. . ...-|.++.+.+..... ... .....+... +.++|+.+.+.. .+.+|++++ ++
T Consensus 337 ~~~L~~l~~~~~~v~-~-vrg~Gl~~gie~~~~~~~~~~~~~~~~~~~~~-l~~~Gi~~~~~~----~~~lr~~P~l~~t 409 (443)
T PRK08360 337 KKRLEEMKKKHELIG-D-VRGIGLMIGVDLVKDRETKERAYEEAAKVVWR-AWELGLIVTFFS----GNVLRIQPPLTIE 409 (443)
T ss_pred HHHHHHHHHhCCCee-e-eeccceEEEEEEecCCcccCccHHHHHHHHHH-HHHCCeEEeecC----CCEEEEeCCCCCC
Confidence 554443 33222 2 22346666666632100 000 012344444 456799987532 478999776 79
Q ss_pred hHHHHHHHHHHHHHHHHhcc
Q 014603 401 PSALEDGLGRMKAFYDRHAK 420 (422)
Q Consensus 401 ~~~l~~~~~~l~~~~~~~~~ 420 (422)
+++++++++++.+++++..+
T Consensus 410 ~~~id~~~~~l~~~l~~~~~ 429 (443)
T PRK08360 410 KEVLDEGLDILEEAIEDVEE 429 (443)
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999987643
No 219
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.93 E-value=2e-23 Score=198.95 Aligned_cols=335 Identities=16% Similarity=0.165 Sum_probs=218.7
Q ss_pred cCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCC-CCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHH
Q 014603 42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNC-YSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT 120 (422)
Q Consensus 42 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~-y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~ 120 (422)
.+|+.++||.++..... .-..+|++.+++.++++...... ........++.+.+++++ ..+.++++++|+
T Consensus 34 ~~g~~~lD~~s~~~~~~-~Gh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--------~~~~~~~~~SGs 104 (401)
T TIGR01885 34 VEGKRYLDFLSAYSAVN-QGHCHPKIVKALTEQAQKLTLSSRAFYNDVFGEFAEYVTKLF--------GYDKVLPMNTGA 104 (401)
T ss_pred CCCCEEEEcccCHhhcc-CCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhhc--------CCCEEEEeCccH
Confidence 36888999998754421 12357999999999987532111 001223456666666655 235899999999
Q ss_pred HHHHHHHHHhc----------CCCCEEEecCCCccch-HHHHhhCCC------------eEEEeeccCCCCcccCHHHHH
Q 014603 121 QAIEVILTVLA----------RPGANILLPRPGFPYY-EARATHSHL------------EVRHFDLLPAKGWEVDLDAVE 177 (422)
Q Consensus 121 ~a~~~~~~~l~----------~~gd~Vl~~~~~~~~~-~~~~~~~g~------------~~~~~~~~~~~~~~~d~~~l~ 177 (422)
+|++.++.... ...+.|+....+|++. .......+. ++..++. .|++.|+
T Consensus 105 ~A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~le 177 (401)
T TIGR01885 105 EAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIPY-------NNLEALE 177 (401)
T ss_pred HHHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeCC-------CCHHHHH
Confidence 99999998742 1236788888898874 232222221 1111211 2678888
Q ss_pred Hhhc---CCceEEEEeCCCCCcccccC-HHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecC
Q 014603 178 ALAD---ENTVALVIINPGNPCGNVYT-YQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSI 253 (422)
Q Consensus 178 ~~~~---~~~~~i~i~~p~nptG~~~~-~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~ 253 (422)
+.++ ++..++++..+++++|...+ .+.+++|.++|++||+++|+||+|.++.++|... .....+..++++ ++
T Consensus 178 ~~l~~~~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~G~~~-~~~~~~~~~di~---~~ 253 (401)
T TIGR01885 178 EALEDHGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTGKLL-CVDHENVKPDIV---LL 253 (401)
T ss_pred HHHHhcCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhh-HHhhcCCCCCEE---Ee
Confidence 8774 34455555555889999875 4579999999999999999999998877766432 121222222333 35
Q ss_pred ccccCCCCceeEEEEeeCCCCcccchhHHHHHHhh-hhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHH
Q 014603 254 SKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSF-LNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDR 332 (422)
Q Consensus 254 sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 332 (422)
+|.+++.++|+|+++++ +++++.+... ...+.+.+++.+.++.++|+...++ ...++++++.+++++.
T Consensus 254 gK~l~~g~~~ig~v~~~--------~~i~~~~~~~~~~~t~~~~p~~~~aa~a~L~~i~~~---~l~~~~~~~~~~~~~~ 322 (401)
T TIGR01885 254 GKALSGGVYPVSAVLAD--------DDVMLTIKPGEHGSTYGGNPLACAVAVAALEVLEEE---KLAENAEKLGEIFRDQ 322 (401)
T ss_pred eccccCCCCCcEEEEEc--------HHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHH
Confidence 79987766999999986 4677766542 2234456788899998888764332 3445677778888888
Q ss_pred hhcCCCCCCC-CCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHH
Q 014603 333 LKEIPCITCP-KKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLG 409 (422)
Q Consensus 333 L~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~ 409 (422)
|++++ ..++ ..+..|.+..+.++.... + ....++...+ .++||.+.|+. .+.+|++++ +++++|+++++
T Consensus 323 L~~l~-~~~~~~~~g~g~~~~i~~~~~~~-~-~~~~~l~~~l-~~~Gv~v~~~~----~~~lRi~p~l~~t~~~i~~~l~ 394 (401)
T TIGR01885 323 LKKLP-KPIITEVRGRGLLNAIVIDESKT-G-RTAWDLCLKL-KEKGLLAKPTH----GNIIRLAPPLVITEEQLDEGLE 394 (401)
T ss_pred HHhcc-CCceeEEeecCeeEEEEeccCcc-h-hHHHHHHHHH-HhCCEEEEecC----CCEEEEeCCccCCHHHHHHHHH
Confidence 98873 2211 112335555555543210 0 1245666665 56799998753 578999986 88999999999
Q ss_pred HHHHHH
Q 014603 410 RMKAFY 415 (422)
Q Consensus 410 ~l~~~~ 415 (422)
+|++++
T Consensus 395 ~l~~~l 400 (401)
T TIGR01885 395 IIKKVI 400 (401)
T ss_pred HHHHHh
Confidence 999876
No 220
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.93 E-value=2.6e-23 Score=195.39 Aligned_cols=215 Identities=17% Similarity=0.158 Sum_probs=160.6
Q ss_pred CCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHH---hhCCCeEEEeec
Q 014603 87 VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARA---THSHLEVRHFDL 163 (422)
Q Consensus 87 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~---~~~g~~~~~~~~ 163 (422)
+...++++.++++++ .+++++++||++|+..++.+++++||+|+++.+.|.++...+ ...|++++.+.
T Consensus 53 p~~~~lE~~lA~l~g--------~~~~l~~~sG~~Ai~~~l~~ll~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v~~~~- 123 (385)
T PRK08574 53 PTLRPLEEALAKLEG--------GVDALAFNSGMAAISTLFFSLLKAGDRVVLPMEAYGTTLRLLKSLEKFGVKVVLAY- 123 (385)
T ss_pred ccHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHhhccCcEEEEEC-
Confidence 467899999999983 357788899999999999999999999999999998876555 34566665432
Q ss_pred cCCCCcccCHHHHHHhhcC-CceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccC
Q 014603 164 LPAKGWEVDLDAVEALADE-NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG 242 (422)
Q Consensus 164 ~~~~~~~~d~~~l~~~~~~-~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~ 242 (422)
.|++.+++.+++ +++++++++|+||+|.+++ +++|+++|+++|+++|+|++|+... ...++ ..+
T Consensus 124 -------~d~~~l~~~i~~~~tklV~ie~p~NPtG~v~d---l~~I~~la~~~gi~livD~t~a~~~----~~~~l-~~G 188 (385)
T PRK08574 124 -------PSTEDIIEAIKEGRTKLVFIETMTNPTLKVID---VPEVAKAAKELGAILVVDNTFATPL----LYRPL-RHG 188 (385)
T ss_pred -------CCHHHHHHhcCccCceEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCccc----cCChh-hhC
Confidence 367889998887 8999999999999999975 6788999999999999999986421 11122 223
Q ss_pred CCCCeEEEecCccccCCCCcee-EEEEeeCCCCcccchhHHHHHHhhhhh-ccCcchHHHHHHHHHHhhchHHHHHHHHH
Q 014603 243 SIVPVLTLGSISKRWIVPGWRL-GWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQGAVPQILEKTEEEFFSKITD 320 (422)
Q Consensus 243 ~~~~~i~i~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 320 (422)
. .+++.|++|.++++|-.+ |++++.+ +++.+++...... ....++...+.+...|+. +..+.+
T Consensus 189 a---Divv~S~sK~l~g~~d~~gG~vi~~~-------~~~~~~~~~~~~~~g~~~~p~~a~l~l~~l~t-----L~~R~~ 253 (385)
T PRK08574 189 A---DFVVHSLTKYIAGHNDVVGGVAVAWS-------GEFLEELWEWRRRLGTIMQPFEAYLVLRGLKT-----LEVRFE 253 (385)
T ss_pred C---cEEEeeCceeecCCCCceeEEEEECc-------HHHHHHHHHHHHhcCCCCCHHHHHHHHcccCc-----HHHHHH
Confidence 3 389999999988777554 6566643 4566666655442 334555555555555554 566667
Q ss_pred HHHHHHHHHHHHhhcCCCCC
Q 014603 321 ILRETADICCDRLKEIPCIT 340 (422)
Q Consensus 321 ~~~~~~~~l~~~L~~~~~~~ 340 (422)
+..++...+.+.|+++|.+.
T Consensus 254 ~~~~na~~la~~L~~~p~v~ 273 (385)
T PRK08574 254 RQCRNAMAIAEFLSEHPKVA 273 (385)
T ss_pred HHHHHHHHHHHHHHcCCCcC
Confidence 77788888899999887665
No 221
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.93 E-value=1.9e-23 Score=195.55 Aligned_cols=283 Identities=17% Similarity=0.221 Sum_probs=192.8
Q ss_pred CCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHH----hhCCC
Q 014603 81 NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARA----THSHL 156 (422)
Q Consensus 81 ~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~----~~~g~ 156 (422)
.+|+ .+...+|+++++++. . ++.+++++|++|+..++.+++++||+|+++.|+|+++...+ ...|+
T Consensus 46 ~ry~-~p~~~~Le~~lA~l~--------~-~~~v~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~ 115 (366)
T PRK07582 46 GRAS-NPTWRALEAALGELE--------G-AEALVFPSGMAAITAVLRALLRPGDTVVVPADGYYQVRALAREYLAPLGV 115 (366)
T ss_pred ECCC-CccHHHHHHHHHHHc--------C-CCEEEECCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHHHhcCeE
Confidence 3444 356789999999986 2 35666777788999999999999999999999998876544 34688
Q ss_pred eEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCC
Q 014603 157 EVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFV 236 (422)
Q Consensus 157 ~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~ 236 (422)
+++.++..+. .+ .+.++++++++++|+||+|.+ .++++|+++|+++|+++|+|++|... .+..
T Consensus 116 ~v~~v~~~~~------~~----~~~~~t~lV~le~p~NPtg~v---~di~~I~~~a~~~g~~lvVD~t~~~~--~~~~-- 178 (366)
T PRK07582 116 TVREAPTAGM------AE----AALAGADLVLAETPSNPGLDV---CDLAALAAAAHAAGALLVVDNTTATP--LGQR-- 178 (366)
T ss_pred EEEEECCCCh------HH----HhccCceEEEEECCCCCCCCc---cCHHHHHHHHHHcCCEEEEECCCCCc--cccC--
Confidence 8887765321 11 223578999999999999977 46899999999999999999998631 1222
Q ss_pred CccccCCCCCeEEEecCccccCC-CCceeEEEEeeCCCCcccchhHHHHHHhhhhh-ccCcchHHHHHHHHHHhhchHHH
Q 014603 237 PMGVFGSIVPVLTLGSISKRWIV-PGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQGAVPQILEKTEEEF 314 (422)
Q Consensus 237 ~~~~~~~~~~~i~i~s~sK~~~~-~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~ 314 (422)
++ .++.+ +++.|++|.+++ +|+++||+++++ +++.+++...... ...++++.++.+...|+.
T Consensus 179 p~-~~g~D---ivv~S~sK~l~G~~g~~~G~v~~~~-------~~l~~~l~~~~~~~g~~~~~~~a~l~~r~l~t----- 242 (366)
T PRK07582 179 PL-ELGAD---LVVASDTKALTGHSDLLLGYVAGRD-------PELMAAVERWRLLAGAIPGPFEAWLAHRSLGT----- 242 (366)
T ss_pred ch-hcCCc---EEEecccccccCCCCeeEEEEEcCc-------HHHHHHHHHHHHHhCCCCCHHHHHHHHhcccc-----
Confidence 22 13333 788999999854 679999999753 4577777665543 345677777776666664
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC----------------CceEEEEecCcccccCCCCHHHHHHHHHHhcC
Q 014603 315 FSKITDILRETADICCDRLKEIPCITCPKKPE----------------GSMFVMVKLNYSLLEGINSDMEFALKLAKEES 378 (422)
Q Consensus 315 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~----------------~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g 378 (422)
+..+.++..++...+.+.|+++|.+..+.+|. .|-.+.+.++ +. +.+.+++++.+
T Consensus 243 l~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~--------~~-~~~~~~~~~l~ 313 (366)
T PRK07582 243 LGLRFARQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELA--------DA-AAAERFVAASR 313 (366)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeC--------CH-HHHHHHHHhCC
Confidence 55566777889999999999888765333322 2334455564 12 23344556556
Q ss_pred eEEe-cCCC-----------CC--C-CCeEEEEeccChHHHHHHHHHHHHHHHH
Q 014603 379 VIVL-PGIT-----------VG--L-KDWLRITFAVEPSALEDGLGRMKAFYDR 417 (422)
Q Consensus 379 i~v~-~g~~-----------~~--~-~~~iRis~~~~~~~l~~~~~~l~~~~~~ 417 (422)
+... ++.+ .+ . ++.||+|++.+ +.+.+++.|+++++.
T Consensus 314 ~~~~~~s~G~~~sl~~~~~~~~~~~~~~liR~svGlE--~~~dli~dl~~al~~ 365 (366)
T PRK07582 314 LVVAATSFGGVHTSADRRARWGDAVPEGFVRLSCGIE--DTDDLVADLERALDA 365 (366)
T ss_pred cceecccCCCccchhhhHHHcCCCCCCCeEEEEeccC--CHHHHHHHHHHHHhh
Confidence 5543 1110 01 1 35799999963 445556666666653
No 222
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.93 E-value=9.7e-24 Score=201.76 Aligned_cols=347 Identities=15% Similarity=0.108 Sum_probs=217.4
Q ss_pred cCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHH
Q 014603 42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ 121 (422)
Q Consensus 42 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 121 (422)
.+|+.++||..|.+....+ ..+|.+.+++.+++.+.. ..|.+.....++.+.+++.+ + ..+.+++++||++
T Consensus 47 ~dG~~~lD~~~g~~~~~lG-h~~p~i~~a~~~~~~~~~-~~~~~~~~~~~la~~L~~~~----~---~~~~v~~~~sGse 117 (426)
T PRK00062 47 VDGNEYIDYVGSWGPMILG-HAHPEVVEAVIEAAEKGL-SFGAPTELEVELAELVIELV----P---SIEMVRMVNSGTE 117 (426)
T ss_pred CCCCEEEEcccchhhhhcC-CCCHHHHHHHHHHHHhCC-cCCCCCHHHHHHHHHHHHhC----C---CCCEEEEecCHHH
Confidence 3689999999987654333 378999999999998743 23334444455555555553 1 3568999999999
Q ss_pred HHHHHHHHhcC--CCCEEEecCCCccchHHHHhhC-CCeEE-----EeeccC----CCCc---ccCHHHHHHhhcC--Cc
Q 014603 122 AIEVILTVLAR--PGANILLPRPGFPYYEARATHS-HLEVR-----HFDLLP----AKGW---EVDLDAVEALADE--NT 184 (422)
Q Consensus 122 a~~~~~~~l~~--~gd~Vl~~~~~~~~~~~~~~~~-g~~~~-----~~~~~~----~~~~---~~d~~~l~~~~~~--~~ 184 (422)
|++.+++.... .+++|+..+++||++...+... +.... ..+..+ .... ..|++.+++.+.. +.
T Consensus 118 A~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~ 197 (426)
T PRK00062 118 ATMSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAPYNDLEAVEELFEEYGDE 197 (426)
T ss_pred HHHHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccceEEcCCCCHHHHHHHHHhCCCc
Confidence 99999987543 2579999999999986433221 10000 000000 0000 0267888887742 23
Q ss_pred eEEEEeCC-CCCcccccC-HHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCc
Q 014603 185 VALVIINP-GNPCGNVYT-YQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGW 262 (422)
Q Consensus 185 ~~i~i~~p-~nptG~~~~-~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~ 262 (422)
.+.++..| ...+|.+.+ .+++++|.++|++||+++|+||+|.++ ..|... ....++..++ +.+++|.++ .|+
T Consensus 198 ~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~-r~g~~~-~~~~~~~~pD---i~~~gK~l~-~G~ 271 (426)
T PRK00062 198 IAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGF-RVALGG-AQGYYGVTPD---LTTLGKIIG-GGL 271 (426)
T ss_pred EEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhcc-ccCCcc-HHHHhCCCcc---hHhhhhHhh-CCC
Confidence 44455555 455787765 888999999999999999999999977 333211 1122222222 457899975 789
Q ss_pred eeEEEEeeCCCCcccchhHHHHHHhh---h-hhccCcchHHHHHHHHHHhhch-HHHHHHHHHHHHHHHHHHHHHhhcCC
Q 014603 263 RLGWLVTSDPNGILQDSGIVDSIKSF---L-NISSDPATFIQGAVPQILEKTE-EEFFSKITDILRETADICCDRLKEIP 337 (422)
Q Consensus 263 r~G~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~ 337 (422)
|+|+++++ +++++.+... . ..+.+.+++.++++.++|+... +...++..+.....++.+.+.+++++
T Consensus 272 p~ga~~~~--------~~i~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 343 (426)
T PRK00062 272 PVGAFGGR--------REIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLKLLKEPGFYEELEALTKRLAEGLKEAAKKAG 343 (426)
T ss_pred cceeeeEH--------HHHHHhhccCCCceecccCcCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999885 4677777532 1 1234678899999999888643 23444444444445555554444553
Q ss_pred CCCCCCCCCCceEEEEecCcccccC-----CCC---HHHHHHHHHHhcCeEEecCCCCCCCCeEEEEeccChHHHHHHHH
Q 014603 338 CITCPKKPEGSMFVMVKLNYSLLEG-----INS---DMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALEDGLG 409 (422)
Q Consensus 338 ~~~~~~~~~~g~~~~~~~~~~~~~~-----~~~---~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~l~~~~~ 409 (422)
+... ....|.++.+.+....... ..+ ...+... +.++||.+.|.. .+.+++++.+++++++++++
T Consensus 344 -~~~~-vrg~G~~~~i~l~~~~~~~~~~~~~~~~~~~~~i~~~-l~~~Gv~v~~~~----~~~~~~~~~~t~~ei~~~~~ 416 (426)
T PRK00062 344 -IPLT-VNRVGSMFGLFFTDEPVTNYADAKKSDTERFARFFHA-MLDEGVYLAPSQ----FEAGFVSAAHTDEDIEKTLE 416 (426)
T ss_pred -CceE-EEEecceEEEEEecCCCcchhhhccccHHHHHHHHHH-HHHCCeEeecCC----cCceeeeccCCHHHHHHHHH
Confidence 3211 2233555555553210000 001 1344444 456799998753 24578887799999999999
Q ss_pred HHHHHHHHh
Q 014603 410 RMKAFYDRH 418 (422)
Q Consensus 410 ~l~~~~~~~ 418 (422)
+|+++++++
T Consensus 417 ~l~~~l~~~ 425 (426)
T PRK00062 417 AARKAFAAL 425 (426)
T ss_pred HHHHHHHhh
Confidence 999998764
No 223
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.93 E-value=5.4e-23 Score=197.26 Aligned_cols=351 Identities=19% Similarity=0.162 Sum_probs=219.1
Q ss_pred cCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHH
Q 014603 42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ 121 (422)
Q Consensus 42 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 121 (422)
.+|+.+|||..|......+ ..+|++.+++.+++.+.. .+.......+.+..+++.+....+ ....+.++++++|++
T Consensus 53 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~q~~~~~--~~~~~~~~~~~~~~la~~l~~~~p-~~~~~~v~f~~sGse 128 (443)
T PRK06058 53 VDGNRLIDLGSGIAVTSVG-NSAPRVVEAVREQVARFT--HTCFMVTPYEGYVAVAEQLNRLTP-GDHEKRSALFNSGAE 128 (443)
T ss_pred CCCCEEEEcCcchhhhccC-CCCHHHHHHHHHHHHhcc--CccccccCCHHHHHHHHHHHHhCC-CCCCCEEEEeCCcHH
Confidence 3688899998886443233 457899999999997632 222211233555566666655332 111258999999999
Q ss_pred HHHHHHHHhc--CCCCEEEecCCCccchHHHHhhCCC--------------eEEEeeccCCCC----ccc--------CH
Q 014603 122 AIEVILTVLA--RPGANILLPRPGFPYYEARATHSHL--------------EVRHFDLLPAKG----WEV--------DL 173 (422)
Q Consensus 122 a~~~~~~~l~--~~gd~Vl~~~~~~~~~~~~~~~~g~--------------~~~~~~~~~~~~----~~~--------d~ 173 (422)
|++.+++... ...++|+....+||++...+..... .+..++.....+ ... ..
T Consensus 129 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (443)
T PRK06058 129 AVENAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAI 208 (443)
T ss_pred HHHHHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCcccccccccccchHHHHHHHH
Confidence 9999988432 1237899999999998655442210 111222110000 000 12
Q ss_pred HHHHHhhcCCceEEEEeCCCCCc-ccc-cCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEe
Q 014603 174 DAVEALADENTVALVIINPGNPC-GNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLG 251 (422)
Q Consensus 174 ~~l~~~~~~~~~~i~i~~p~npt-G~~-~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~ 251 (422)
+.+++.+..+..+.++..|.+.. |.. ++.+.+++|.++|++||+++|.||++.++.++|... ....++..+++++
T Consensus 209 ~~l~~~~~~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~~f-a~~~~gv~PDiv~-- 285 (443)
T PRK06058 209 TVIEKQVGADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGAWF-ACEHEGIVPDLIT-- 285 (443)
T ss_pred HHHHHhhCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcChhhh-HHHhcCCCCCEEE--
Confidence 23334444455667778885544 444 568899999999999999999999999987777533 2233333334443
Q ss_pred cCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhh-hhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHH
Q 014603 252 SISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICC 330 (422)
Q Consensus 252 s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~ 330 (422)
++|.++ +|+|+|+++++ +++++.+.... ..+.+.++++++++.+.|+...+. +..++++++.+++.
T Consensus 286 -~gK~l~-~G~Pi~av~~~--------~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~~~~~---~l~~~~~~~g~~l~ 352 (443)
T PRK06058 286 -TAKGIA-GGLPLSAVTGR--------AEIMDAPHPGGLGGTYGGNPVACAAALAAIETIEED---DLVARARQIEALMT 352 (443)
T ss_pred -Eccccc-CCCccEEEEEc--------HHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHc---CHHHHHHHHHHHHH
Confidence 379975 78999999986 46777665433 345678999999999999864322 34455555566666
Q ss_pred HHhhcC----CCCCCCCCCCCceEEEEecCcccccCC--CCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChH
Q 014603 331 DRLKEI----PCITCPKKPEGSMFVMVKLNYSLLEGI--NSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPS 402 (422)
Q Consensus 331 ~~L~~~----~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~ 402 (422)
+.|+++ +.+. ..... |.++.+.+........ .....+... +.++||++.++..+ .+++|+.++ .+++
T Consensus 353 ~~L~~l~~~~~~i~-~vrg~-G~~~~i~~~~~~~~~~~~~~~~~l~~~-~~~~Gv~~~~~~~~--~~~lr~~Ppl~~t~~ 427 (443)
T PRK06058 353 DRLRALAAEDDRIG-DVRGR-GAMIAIELVKPGTTEPDAELTKALAAA-AHAAGVIVLTCGTY--GNVIRLLPPLVIGDE 427 (443)
T ss_pred HHHHHHHhhCCcEE-eeecc-ceEEEEEEecCCCCCCcHHHHHHHHHH-HHHCCeEEeccCCC--CCEEEEECCCccCHH
Confidence 666543 3222 11333 5565666632100000 012233333 35679999886544 378999876 7999
Q ss_pred HHHHHHHHHHHHHHH
Q 014603 403 ALEDGLGRMKAFYDR 417 (422)
Q Consensus 403 ~l~~~~~~l~~~~~~ 417 (422)
++++++++|++++++
T Consensus 428 ~i~~~~~~l~~~l~~ 442 (443)
T PRK06058 428 LLREGLDVLEAALAD 442 (443)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999999875
No 224
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.93 E-value=4.9e-23 Score=197.68 Aligned_cols=353 Identities=19% Similarity=0.147 Sum_probs=219.6
Q ss_pred cCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCC--CCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCH
Q 014603 42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCY--SSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGC 119 (422)
Q Consensus 42 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y--~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~ 119 (422)
.+|+.+|||..|......+ ..+|+|.+++.++++....... .......++.+.+++++ +-..+.++|+++|
T Consensus 40 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~a~~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~------~~~~~~v~f~~SG 112 (433)
T PRK08117 40 VDGKEYLDFTSGIAVANVG-HRHPKVVQAIKEQADKLMHGPSGVIYYESILKLAEELAEIT------PGGLDCFFFSNSG 112 (433)
T ss_pred CCCCEEEECCcchhhccCC-CCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhC------CCCCCEEEEeCcH
Confidence 3688999999886543333 4678999999999876322111 11122234444444443 1234689999999
Q ss_pred HHHHHHHHHHhc--CCCCEEEecCCCccchHHHHhh-CCC-------------eEEEeeccCCC--Ccc--------cCH
Q 014603 120 TQAIEVILTVLA--RPGANILLPRPGFPYYEARATH-SHL-------------EVRHFDLLPAK--GWE--------VDL 173 (422)
Q Consensus 120 ~~a~~~~~~~l~--~~gd~Vl~~~~~~~~~~~~~~~-~g~-------------~~~~~~~~~~~--~~~--------~d~ 173 (422)
++|++.+++... ....+|+..+.+||+....+.. .+. .+..+|..... ... -++
T Consensus 113 seA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (433)
T PRK08117 113 AEAIEGALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECL 192 (433)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHHHHHH
Confidence 999999988632 1236889999999887544321 110 11222221000 000 144
Q ss_pred HHHHHhhc----CCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCe
Q 014603 174 DAVEALAD----ENTVALVIINP-GNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPV 247 (422)
Q Consensus 174 ~~l~~~~~----~~~~~i~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (422)
+.+++.++ .+..+.++..| ....|.+ ++.+.++++.++|++||+++|+||+|.++.++|.... ...++..+
T Consensus 193 ~~l~~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~~~~-~~~~gv~p-- 269 (433)
T PRK08117 193 RDLESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTGEWFA-AQTFGVVP-- 269 (433)
T ss_pred HHHHHHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCccccchh-HhhcCCCC--
Confidence 55666543 24466677777 5556664 5788899999999999999999999998877775422 12233222
Q ss_pred EEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhh-hhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHH
Q 014603 248 LTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQGAVPQILEKTEEEFFSKITDILRETA 326 (422)
Q Consensus 248 i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 326 (422)
.+.+++|.++ +|+|+|+++++ +++++.+.... ..+.+.++++++++.++|+...+. ...++++++.
T Consensus 270 -Di~t~sK~lg-~G~pigav~~~--------~~i~~~~~~~~~~~T~~~np~~~aaa~a~L~~l~~~---~l~~~~~~~g 336 (433)
T PRK08117 270 -DIMTIAKGIA-SGLPLSAVVAS--------KELMEQWPLGSHGTTFGGNPVACAAALATLEVIKEE---KLLDNANEMG 336 (433)
T ss_pred -CEeehhhhcc-CCCcceeEEEc--------HHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHhc---cHHHHHHHHH
Confidence 2468899975 89999999986 46766664332 234467889999999999864322 2344455555
Q ss_pred HHHHHHhhc----CCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cC
Q 014603 327 DICCDRLKE----IPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VE 400 (422)
Q Consensus 327 ~~l~~~L~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~ 400 (422)
+++++.|++ ++.+ ...+..|.++++.+..............+...+.++||.+.+... ..+.+|++++ ++
T Consensus 337 ~~l~~~L~~l~~~~~~~--~~vrg~Gl~~gi~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g~--~~~~lRl~p~~~~t 412 (433)
T PRK08117 337 AYALERLEVLKEKHPVI--GDVRGIGLMIGIEIVDPDGEPDGDAVEKILDKCLEKGLLFYLCGN--AGNVLRMIPPLTVT 412 (433)
T ss_pred HHHHHHHHHHHhcCCce--eeeecCCcEEEEEEecCCCCcchHHHHHHHHHHHHCCCEEeecCC--CCCEEEEeCCccCC
Confidence 555555554 3212 123455677777774321000001122333445667998876322 2578999975 89
Q ss_pred hHHHHHHHHHHHHHHHHhccc
Q 014603 401 PSALEDGLGRMKAFYDRHAKK 421 (422)
Q Consensus 401 ~~~l~~~~~~l~~~~~~~~~~ 421 (422)
+++|++++++|.++++++.+|
T Consensus 413 ~~~i~~~~~~l~~~l~~~~~~ 433 (433)
T PRK08117 413 KEEIDEGLDILDEALTEYEAK 433 (433)
T ss_pred HHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999887654
No 225
>PRK05968 hypothetical protein; Provisional
Probab=99.93 E-value=5.3e-23 Score=193.99 Aligned_cols=283 Identities=18% Similarity=0.127 Sum_probs=196.4
Q ss_pred CCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccch----HHHHhhCCCeEEEeec
Q 014603 88 GILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYY----EARATHSHLEVRHFDL 163 (422)
Q Consensus 88 g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~----~~~~~~~g~~~~~~~~ 163 (422)
...++++.++++.+ . +..+++++|+.|+..++.+++++||+|+++.+.|.+. ...+...|++++.++.
T Consensus 64 ~~~~le~~lA~l~g------~--~~av~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 135 (389)
T PRK05968 64 TVRAFEEMLAKLEG------A--EDARGFASGMAAISSTVLSFVEPGDRIVAVRHVYPDAFRLFETILKRMGVEVDYVDG 135 (389)
T ss_pred hHHHHHHHHHHHhC------C--CcEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCceEEEeCC
Confidence 46799999999983 2 3455667778899999998999999999999999763 3455667888887753
Q ss_pred cCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCC
Q 014603 164 LPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS 243 (422)
Q Consensus 164 ~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~ 243 (422)
.|++.+++.+ ++++++++++|+|+++.. .++++|.++|+++|+++|+|++|+...+.. ++ ..+.
T Consensus 136 -------~d~~~l~~~i-~~tklV~ie~pt~~~~~~---~dl~~i~~la~~~gi~vivD~a~a~~~~~~----p~-~~g~ 199 (389)
T PRK05968 136 -------RDEEAVAKAL-PGAKLLYLESPTSWVFEL---QDVAALAALAKRHGVVTMIDNSWASPVFQR----PI-TLGV 199 (389)
T ss_pred -------CCHHHHHHhc-ccCCEEEEECCCCCCCcH---HHHHHHHHHHHHcCCEEEEECCCcchhccC----ch-hcCC
Confidence 2788898887 578899998877776655 899999999999999999999997543211 22 1233
Q ss_pred CCCeEEEecCccccCCCC-ceeEEEEeeCCCCcccchhHHHHHHhhhh--hccCcchHHHHHHHHHHhhchHHHHHHHHH
Q 014603 244 IVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKSFLN--ISSDPATFIQGAVPQILEKTEEEFFSKITD 320 (422)
Q Consensus 244 ~~~~i~i~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 320 (422)
+ +++.|++|.++++| .+.|+++.+ ++++++++.... .....++..++.+...|+. +..+.+
T Consensus 200 D---ivv~S~tK~l~g~~~~~gG~i~~~--------~~~~~~l~~~~~~~~g~~~~~~~A~~~l~~L~t-----l~~r~~ 263 (389)
T PRK05968 200 D---LVIHSASKYLGGHSDTVAGVVAGS--------KEHIARINAEAYPYLGAKLSPFEAWLLLRGLRT-----LPLRMK 263 (389)
T ss_pred c---EEEeeccccccCCCCeEEEEEEEC--------HHHHHHHHHHHHHhCCCCCChHHHHHHHcccCc-----HHHHHH
Confidence 2 88889999988765 578888764 456676665432 2235566666666666654 566677
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCC-----------CceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCC-
Q 014603 321 ILRETADICCDRLKEIPCITCPKKPE-----------GSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVG- 388 (422)
Q Consensus 321 ~~~~~~~~l~~~L~~~~~~~~~~~~~-----------~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~- 388 (422)
+..++.+.+.+.|+++|.+..+.+|. .|..+.+.++.. .+..+++..| +..++.+.-|..+.
T Consensus 264 ~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~~-----~~~~~f~~~L-~~~~~~~s~G~~~sl 337 (389)
T PRK05968 264 AHEASALEIARRLKAHPVVERVCHPALANHPPAGLSGTSGLFSFIFREG-----IDVRAFADAL-KLFRLGVSWGGHESL 337 (389)
T ss_pred HHHHHHHHHHHHHHhCCCccEEECCCCCCChHHhCCCCceEEEEEECCH-----HHHHHHHHhC-CccEEecCCCCCCce
Confidence 77778889999999998876454441 233445556421 1345555554 44455544444332
Q ss_pred ---------------------C-CCeEEEEeccChHHHHHHHHHHHHHHHHh
Q 014603 389 ---------------------L-KDWLRITFAVEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 389 ---------------------~-~~~iRis~~~~~~~l~~~~~~l~~~~~~~ 418 (422)
. ++.+|+|++. |+.+.+++.|++++++.
T Consensus 338 v~p~~~~~~~~~~~~~~~~~gi~~~liR~SvGl--E~~~dl~~dl~~al~~~ 387 (389)
T PRK05968 338 VVPAEVVLQQKAQPNSAARFGVSPRSVRLHVGL--EGTEALWADLEQALAAA 387 (389)
T ss_pred eeeCcccccccCCHHHHHhcCCCCCeEEEEecc--CCHHHHHHHHHHHHHHh
Confidence 1 4689999996 35666667777777643
No 226
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.93 E-value=3.9e-23 Score=194.85 Aligned_cols=289 Identities=16% Similarity=0.140 Sum_probs=195.1
Q ss_pred CCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHH----HHhhCCCeEEEee
Q 014603 87 VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEA----RATHSHLEVRHFD 162 (422)
Q Consensus 87 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~----~~~~~g~~~~~~~ 162 (422)
+...++++.++++. ..+++++++|+++|+..++.+++++||+|+++.|+|.++.. .+...|++++.++
T Consensus 65 pt~~~Le~~lA~l~--------g~~~~l~~~sgt~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi~v~~vd 136 (394)
T PRK07050 65 PTSLALAQRLAEIE--------GGRHALLQPSGLAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGEWLARDFGITVRFYD 136 (394)
T ss_pred HHHHHHHHHHHHHh--------CCCeEEEeccHHHHHHHHHHHHhCCCCEEEEecCCcccHHHHHHHHHHhcCeEEEEEC
Confidence 44678899999887 34689999999999999999999999999999999987653 4566788887765
Q ss_pred ccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccC
Q 014603 163 LLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG 242 (422)
Q Consensus 163 ~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~ 242 (422)
.. +.+.+++.++++++++++++|+||+|.. .++++|+++|+++|+++|+|++|....+ ..++ .++
T Consensus 137 ~~-------~~~~l~~~i~~~tklV~le~p~Np~~~~---~di~~I~~ia~~~gi~livD~a~a~~~~----~~~l-~~G 201 (394)
T PRK07050 137 PL-------IGAGIADLIQPNTRLIWLEAPGSVTMEV---PDVPAITAAARARGVVTAIDNTYSAGLA----FKPF-EHG 201 (394)
T ss_pred CC-------CHHHHHHhcCCCCeEEEEECCCCCCccH---hhHHHHHHHHHHcCCEEEEECCcccccc----cCHH-HcC
Confidence 21 4467888888899999999999999766 8999999999999999999999975221 1111 123
Q ss_pred CCCCeEEEecCccccCC-CCceeEEEEeeCCCCcccchhHHHHHHhhhhh-ccCcchHHHHHHHHHHhhchHHHHHHHHH
Q 014603 243 SIVPVLTLGSISKRWIV-PGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQGAVPQILEKTEEEFFSKITD 320 (422)
Q Consensus 243 ~~~~~i~i~s~sK~~~~-~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 320 (422)
. .+++.|++|.+++ .+.+.|++++.+ +++.++++..... ..+.++...+.+...|+. +..+.+
T Consensus 202 a---Di~v~S~tK~~~g~~~~~gG~v~~~~-------~~~~~~~~~~~~~~G~~~~~~~a~l~lr~l~t-----l~~Rl~ 266 (394)
T PRK07050 202 V---DISVQALTKYQSGGSDVLMGATITAD-------AELHAKLKLARMRLGIGVSADDCSLVLRGLPS-----LQVRLA 266 (394)
T ss_pred C---eEEEEECCceecCCCCeeEEEEEECC-------HHHHHHHHHHHHhcCCCCCHHHHHHHHcCCCc-----HHHHHH
Confidence 2 3889999999754 456789888754 4677777665543 345565655555444443 444667
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCC----------------CceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecC
Q 014603 321 ILRETADICCDRLKEIPCITCPKKPE----------------GSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPG 384 (422)
Q Consensus 321 ~~~~~~~~l~~~L~~~~~~~~~~~~~----------------~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g 384 (422)
+..++...+.+.|+++|.+..+.+|. .|..+.+.+.... +..+..+++..+ +..++.+.-|
T Consensus 267 ~~~~~a~~la~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~--~~~~~~~~~~~l-~~~~~~~s~G 343 (394)
T PRK07050 267 AHDRSALEVAEWLKARPEIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDERY--SPAQVDAFVEAL-ELFAIGWSWG 343 (394)
T ss_pred HHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCCC--CHHHHHHHHHcC-CCCeeccccC
Confidence 77777778888888877655332221 1223344453210 001223333332 3334322222
Q ss_pred CCCC-----------------CCCeEEEEeccChHHHHHHHHHHHHHHHHh
Q 014603 385 ITVG-----------------LKDWLRITFAVEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 385 ~~~~-----------------~~~~iRis~~~~~~~l~~~~~~l~~~~~~~ 418 (422)
.... .++.||+|++. |+.+.+++.|.+++...
T Consensus 344 ~~~sl~~~~~~~~~~~~~~~~~~~~iR~svGl--E~~~dl~~dl~~al~~~ 392 (394)
T PRK07050 344 GACSLAMPYDVASMRTAKWPHRGTLVRLYIGL--EDEADLIADLEQALEAA 392 (394)
T ss_pred CccceEeeCcccccchhhcCCCCCEEEEEeCc--CCHHHHHHHHHHHHHHh
Confidence 2110 13679999997 35666777777777654
No 227
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.93 E-value=1.7e-22 Score=193.02 Aligned_cols=352 Identities=16% Similarity=0.141 Sum_probs=214.3
Q ss_pred cCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCC-CEEE-ecCH
Q 014603 42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPD-DVYL-TLGC 119 (422)
Q Consensus 42 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~i~~-~~g~ 119 (422)
.+|+.+|||..|......+ ..+|.+.+++.+++...... .. .....+.+..+++.|.+....+...+ .++| ++||
T Consensus 36 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~ql~~~~~~-~~-~~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sG 112 (425)
T PRK09264 36 EDGKEYIDFFAGAGALNYG-HNNPVLKQALIDYLQRDGIT-HG-LDMHTTAKREFLETFEETILKPRGLDYKVQFTGPTG 112 (425)
T ss_pred CCCCEeeecccchhhccCC-CCCHHHHHHHHHHHHhcccc-cc-cccCcHHHHHHHHHHHHhhcCCcCCCceEEEeCCCH
Confidence 3689999999887554333 46899999999998752111 11 11122444455555543211011122 5656 5899
Q ss_pred HHHHHHHHHHhc--CCCCEEEecCCCccchHHHHhhC-CC------------eEEEeeccCCCCc-ccCHHHHHHhhcC-
Q 014603 120 TQAIEVILTVLA--RPGANILLPRPGFPYYEARATHS-HL------------EVRHFDLLPAKGW-EVDLDAVEALADE- 182 (422)
Q Consensus 120 ~~a~~~~~~~l~--~~gd~Vl~~~~~~~~~~~~~~~~-g~------------~~~~~~~~~~~~~-~~d~~~l~~~~~~- 182 (422)
++|++.+++... ....+|+....+||++...+... +. .+..+|....... .-|++.+++.+.+
T Consensus 113 seA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~ 192 (425)
T PRK09264 113 TNAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDS 192 (425)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHHHhc
Confidence 999999988653 22368999999999875443322 10 1222332110000 0256777777642
Q ss_pred ----CceEEEEeCC-CCCccc-ccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccc
Q 014603 183 ----NTVALVIINP-GNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKR 256 (422)
Q Consensus 183 ----~~~~i~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~ 256 (422)
+..+.++..| ....|. ++|.+.+++|.++|++||+++|+||+++++.++|... .....+..++ +.+++|.
T Consensus 193 ~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~-~~~~~~v~PD---i~t~~K~ 268 (425)
T PRK09264 193 SSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTGTFF-SFERAGITPD---IVTLSKS 268 (425)
T ss_pred cCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCccccHHH-HHhhcCCCCC---EEEeccc
Confidence 2355667777 555675 5788999999999999999999999999887766432 2222222233 3356899
Q ss_pred cCCCCceeEEEEeeCCCCcccchhHHHHHHh-hhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhc
Q 014603 257 WIVPGWRLGWLVTSDPNGILQDSGIVDSIKS-FLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKE 335 (422)
Q Consensus 257 ~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 335 (422)
++..|+|+|++++++ ++ ..+.. ....+.+.++++..++.++++...+ -.+..++++++.+++.+.|++
T Consensus 269 l~~~G~pigav~~~~--------~i-~~~~~~~~~~T~~gnp~~~aaa~a~l~~~~~--~~~l~~~~~~~g~~l~~~l~~ 337 (425)
T PRK09264 269 ISGYGLPMALVLIKP--------EL-DVWKPGEHNGTFRGNNLAFVTATAALEEYWS--DDAFEKEVKAKGELVRERLEE 337 (425)
T ss_pred cCCCccceEEEEEch--------hh-hccCCCccCCCCCCCHHHHHHHHHHHHHHHh--hhHHHHHHHHHHHHHHHHHHH
Confidence 766699999999963 33 22222 1223446677777777777742110 112344444555555554443
Q ss_pred ----CCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHH
Q 014603 336 ----IPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLG 409 (422)
Q Consensus 336 ----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~ 409 (422)
.|.+. ...+..|.++++.++... ....+... +.++||.+.+...+ .+.+|++++ +++++++++++
T Consensus 338 l~~~~~~~~-~~vrg~Gl~~~i~l~~~~-----~~~~l~~~-~~~~Gv~~~~~~~~--~~~lr~~p~l~~t~~ei~~~~~ 408 (425)
T PRK09264 338 IAAKYPGLG-AEVRGRGMMQGIDFGDGE-----LAGKIAAE-AFENGLIIETSGPE--DEVVKLLPPLTIDEEELEEGLD 408 (425)
T ss_pred HHHhCCCce-ecceecccEEEEEecChH-----HHHHHHHH-HHHCCCEEeccCCC--CCEEEEeCCCCCCHHHHHHHHH
Confidence 43321 223445788888886421 23345444 45679999875432 378899887 78999999999
Q ss_pred HHHHHHHHhcc
Q 014603 410 RMKAFYDRHAK 420 (422)
Q Consensus 410 ~l~~~~~~~~~ 420 (422)
+|.+++++..+
T Consensus 409 ~l~~~l~~~~~ 419 (425)
T PRK09264 409 ILEEAVAEVLA 419 (425)
T ss_pred HHHHHHHHHHh
Confidence 99999987643
No 228
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.93 E-value=1.8e-22 Score=192.10 Aligned_cols=353 Identities=17% Similarity=0.146 Sum_probs=218.6
Q ss_pred cCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHH
Q 014603 42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ 121 (422)
Q Consensus 42 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 121 (422)
.+|+.++||..|......+ ..+|.+.+++.+++.+... +.......+.+..+++.+.+..+ +...+.++|+++|++
T Consensus 37 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~ql~~l~~--~~~~~~~~~~~~~la~~l~~~~p-~~~~~~v~f~~SGse 112 (425)
T PRK07495 37 KEGRRYIDFAAGIAVVNTG-HRHPRVIAAVKAQLDRFTH--TCHQVVPYENYVRLAERLNALVP-GDFAKKTIFVTTGAE 112 (425)
T ss_pred CCCCEEEEccccHHhhccC-CCCHHHHHHHHHHHhhccC--cccCccCCHHHHHHHHHHHHhCC-CCCCCEEEECCchHH
Confidence 4689999999887553333 4678999999999876321 11111112334445555544322 111258999999999
Q ss_pred HHHHHHHHhc--CCCCEEEecCCCccchHHHHhhC-CC-------------eEEEeeccCCCCcccC----HHHHHHhhc
Q 014603 122 AIEVILTVLA--RPGANILLPRPGFPYYEARATHS-HL-------------EVRHFDLLPAKGWEVD----LDAVEALAD 181 (422)
Q Consensus 122 a~~~~~~~l~--~~gd~Vl~~~~~~~~~~~~~~~~-g~-------------~~~~~~~~~~~~~~~d----~~~l~~~~~ 181 (422)
|++.+++... ....+|+....+||++...+... +. .+..+|..... .+.+ ++.+++.+.
T Consensus 113 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~l~~~~~ 191 (425)
T PRK07495 113 AVENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVEL-HGVSVEQSLAALDKLFK 191 (425)
T ss_pred HHHHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCccc-ccccHHHHHHHHHHHHH
Confidence 9999988642 22368999999999875443221 11 12233322111 1122 344566553
Q ss_pred ----CCceEEEEeCC-CCCcc-cccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCcc
Q 014603 182 ----ENTVALVIINP-GNPCG-NVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISK 255 (422)
Q Consensus 182 ----~~~~~i~i~~p-~nptG-~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK 255 (422)
.+..+.++..| +..+| ..+|.+.+++|.++|++||+++|+||+|.++.++|... .....+. +..+.++||
T Consensus 192 ~~~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~-a~~~~gv---~pDi~tlsK 267 (425)
T PRK07495 192 ADVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGKLF-AMEHHEV---AADLTTMAK 267 (425)
T ss_pred hccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCCCce-eecccCC---CCCEEeehh
Confidence 24456667777 33377 45799999999999999999999999999887776531 2222222 234677899
Q ss_pred ccCCCCceeEEEEeeCCCCcccchhHHHHHHhhh-hhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhh
Q 014603 256 RWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLK 334 (422)
Q Consensus 256 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~ 334 (422)
.+ .+|+|+|+++++ +++.+.+.... ..+.+.+++.++++.++++...+.. ..++++++.+++++.|+
T Consensus 268 ~l-~~G~pigav~~~--------~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~---l~~~~~~~g~~l~~~L~ 335 (425)
T PRK07495 268 GL-AGGFPLAAVTGR--------AEIMDAPGPGGLGGTYGGNPLGIAAAHAVLDVIEEED---LCERANQLGNRLKQRLA 335 (425)
T ss_pred hh-cCCccceEEEEc--------HHHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHhch---HHHHHHHHHHHHHHHHH
Confidence 96 578999999986 35666654432 3345778899998888887643222 33334444444444443
Q ss_pred ----cCCCCCCCCCCCCceEEEEecCcccccCCC--CHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHH
Q 014603 335 ----EIPCITCPKKPEGSMFVMVKLNYSLLEGIN--SDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALED 406 (422)
Q Consensus 335 ----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~ 406 (422)
++|.+. . ....|.++|+.+......... ....+.. .+.++|+.+.+.... .+.+|+.+. .+++++++
T Consensus 336 ~l~~~~~~i~-~-vrG~Gl~~~iel~~~~~~~~~~~~~~~~~~-~~~~~Gvl~~~~g~~--~~~~r~~Ppl~it~~~id~ 410 (425)
T PRK07495 336 SLRETVPEIA-D-IRGPGFMNAVEFNDADSGLPSAEFANRVRL-KALEKGLILLTCGVH--GNVIRFLAPITIQDDVFAE 410 (425)
T ss_pred HHHhhCCCee-e-eecCceEEEEEEecCCCCCccHHHHHHHHH-HHHHCCeEEeecCCC--CCEEEEeCCCccCHHHHHH
Confidence 344332 1 123388999988532110000 0123333 445679998764221 478999987 78999999
Q ss_pred HHHHHHHHHHHhcc
Q 014603 407 GLGRMKAFYDRHAK 420 (422)
Q Consensus 407 ~~~~l~~~~~~~~~ 420 (422)
++++|+++++++..
T Consensus 411 ~~~~l~~~l~~~~~ 424 (425)
T PRK07495 411 ALDILEASILEASA 424 (425)
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999987653
No 229
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.92 E-value=6.2e-23 Score=209.80 Aligned_cols=342 Identities=14% Similarity=0.088 Sum_probs=230.4
Q ss_pred CceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCC---CCC----CCCCHHHHHHHHHHHhhcCCCCCCCC--CEEEe
Q 014603 46 PLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNC---YSS----TVGILPARRAIADYLNRDLPYKLSPD--DVYLT 116 (422)
Q Consensus 46 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~---y~~----~~g~~~lr~~ia~~l~~~~~~~~~~~--~i~~~ 116 (422)
.+++|+++..+ ++++..+.+++.+.......+. |.. ...+.+.|+.++++++ ++++ .|+||
T Consensus 34 ~~iYLD~Aatt----~~~~~~V~~~~~~~~~~~~~np~s~~~~s~~~~~~~e~aR~~ia~~lg------a~~~~~~VvFt 103 (805)
T PLN02724 34 GVVYLDHAGAT----LYSESQLEAALADFSSNVYGNPHSQSDSSMRSSDTIESARQQVLEYFN------APPSDYACVFT 103 (805)
T ss_pred CCEeEeCCCCC----CCCHHHHHHHHHHHHhhccCCCCcCcchhhhHHHHHHHHHHHHHHHhC------CCccceEEEEe
Confidence 37999999865 2344566666666544321111 111 1236788999999984 4454 58999
Q ss_pred cCHHHHHHHHHHHh-cCCCCEEEecCCCccch---HHHHhhCCCeEEEeeccCC------CCcccCH--HHHHHhh----
Q 014603 117 LGCTQAIEVILTVL-ARPGANILLPRPGFPYY---EARATHSHLEVRHFDLLPA------KGWEVDL--DAVEALA---- 180 (422)
Q Consensus 117 ~g~~~a~~~~~~~l-~~~gd~Vl~~~~~~~~~---~~~~~~~g~~~~~~~~~~~------~~~~~d~--~~l~~~~---- 180 (422)
+|+|+|++.++.++ .++||+|++..-.|.+. ...++..|++++.++++.. ....+++ +.|++.+
T Consensus 104 snaT~alnlva~~l~~~~gd~Iv~t~~eH~svl~~~~~a~~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l 183 (805)
T PLN02724 104 SGATAALKLVGETFPWSSESHFCYTLENHNSVLGIREYALEKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKL 183 (805)
T ss_pred CChHHHHHHHHHHCCCCCCCeEEEeeccccchHHHHHHHHHcCCeEEeccchhccccccccccccccchhhhhhhhhhhh
Confidence 99999999999987 67899999987777554 3444567888888887521 1112332 5565543
Q ss_pred ------cCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHc-----CcEEEEcccccccccCCCCCCCccccCCCCCeEE
Q 014603 181 ------DENTVALVIINPGNPCGNVYTYQHLQKIAETAKKL-----GIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLT 249 (422)
Q Consensus 181 ------~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~-----~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~ 249 (422)
.++++++.+++.+|.||.++|.+.++.+.+.++.+ ++++++|.+++. |+.+.++..++.| ++
T Consensus 184 ~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~----g~~piDv~~~~~D---fl 256 (805)
T PLN02724 184 QKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGC----GTSPPDLSRYPAD---FV 256 (805)
T ss_pred ccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhc----CCCCCChhhcCCC---EE
Confidence 13567899999999999999877655554443332 368999999987 6666677777765 89
Q ss_pred EecCccccC-CCCceeEEEEeeCCCCcccchhHHHHHHh-------------------------hhhhccCcchHHHHHH
Q 014603 250 LGSISKRWI-VPGWRLGWLVTSDPNGILQDSGIVDSIKS-------------------------FLNISSDPATFIQGAV 303 (422)
Q Consensus 250 i~s~sK~~~-~~G~r~G~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~a~ 303 (422)
+.|++|+|| ..| +|++++++ ++.+.+.. .....++++.....++
T Consensus 257 ~~S~HK~~GgP~G--~G~L~vr~--------~~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l 326 (805)
T PLN02724 257 VVSFYKIFGYPTG--LGALLVRR--------DAAKLLKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAAL 326 (805)
T ss_pred EEecceeccCCCC--ceEEEEeh--------hhhhhhcCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHH
Confidence 999999987 345 78888763 22222221 1112356777777788
Q ss_pred HHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCC------CCCCCCCCC--------CceEEEEecCcccccCCCCHHHH
Q 014603 304 PQILEKTEEEFFSKITDILRETADICCDRLKEIP------CITCPKKPE--------GSMFVMVKLNYSLLEGINSDMEF 369 (422)
Q Consensus 304 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~------~~~~~~~~~--------~g~~~~~~~~~~~~~~~~~~~~~ 369 (422)
.++++...+..++.+.++.+++.+++.+.|++++ ++.++ .+. .+..+.+.+.... +..-....
T Consensus 327 ~aal~~l~~ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iy-g~~~~~~~~~~r~~ivsFnv~~~~--~~~v~~~~ 403 (805)
T PLN02724 327 RHGFKLLNRLTISAIAMHTWALTHYVANSLRNLKHGNGAPVCVLY-GNHTFKLEFHIQGPIVTFNLKRAD--GSWVGHRE 403 (805)
T ss_pred HHHHHHHHHhChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEc-CCCCCCCCcccccCEEEEEEEcCC--CCEeCHHH
Confidence 8888765555678888999999999999999875 35533 221 1234444443210 00012233
Q ss_pred HHHHHHhcCeEEecCCCCCC-----------------------------------CCeEEEEec--cChHHHHHHHHHHH
Q 014603 370 ALKLAKEESVIVLPGITVGL-----------------------------------KDWLRITFA--VEPSALEDGLGRMK 412 (422)
Q Consensus 370 ~~~l~~~~gi~v~~g~~~~~-----------------------------------~~~iRis~~--~~~~~l~~~~~~l~ 412 (422)
+..++.++||.++.|..|.. .+.+|+|++ ++.+|++++++.|+
T Consensus 404 v~~l~~~~gI~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~ 483 (805)
T PLN02724 404 VEKLASLSGIQLRTGCFCNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFII 483 (805)
T ss_pred HHHHHHhcCcEEeeccccCchHHHHHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcCccCCHHHHHHHHHHHH
Confidence 55677788999999988752 277999998 78999999999999
Q ss_pred HHHHH
Q 014603 413 AFYDR 417 (422)
Q Consensus 413 ~~~~~ 417 (422)
+.+-.
T Consensus 484 ~~~~~ 488 (805)
T PLN02724 484 SSFVS 488 (805)
T ss_pred HHhhc
Confidence 97643
No 230
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.92 E-value=2.3e-22 Score=189.90 Aligned_cols=339 Identities=14% Similarity=0.131 Sum_probs=219.9
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 122 (422)
+|+.++||..|....+.++. +|.+.+++.+++.+... .+ .....+.+..+++++.+.. ..+.+++++||++|
T Consensus 34 dG~~~lD~~sg~~~~~lGh~-~p~v~~a~~~q~~~~~~-~~--~~~~~~~~~~la~~l~~~~----~~~~v~f~~SGseA 105 (395)
T PRK03715 34 NGKRYLDFIQGWAVNCLGHC-NPGMVEALAAQAEKLIN-PS--PAFYNEPMAKLAGLLTQHS----CFDKVFFANSGAEA 105 (395)
T ss_pred CCCEEEECCcChhhccCCCC-CHHHHHHHHHHHHhccc-cc--ccccCHHHHHHHHHHhhcc----CCCEEEEeCCcHHH
Confidence 68899999988655444443 69999999999875321 11 1234577888899886532 24689999999999
Q ss_pred HHHHHHHhcC------CC-CEEEecCCCccchHHHHhhC-CCeEEEeeccCC-CCc----ccCHHHHHHhhcCCceEEEE
Q 014603 123 IEVILTVLAR------PG-ANILLPRPGFPYYEARATHS-HLEVRHFDLLPA-KGW----EVDLDAVEALADENTVALVI 189 (422)
Q Consensus 123 ~~~~~~~l~~------~g-d~Vl~~~~~~~~~~~~~~~~-g~~~~~~~~~~~-~~~----~~d~~~l~~~~~~~~~~i~i 189 (422)
++.+++.... +| .+|++.+.+||+....+... +.........+. .++ ..|++.+++.+.+++.++++
T Consensus 106 ~e~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~aavi~ 185 (395)
T PRK03715 106 NEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAELNDIASVEKLITDKTVAVML 185 (395)
T ss_pred HHHHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceeeCCchHHHHHHHcCCCceEEEE
Confidence 9999987641 23 67888999998875444332 222111000000 011 13678898888766665555
Q ss_pred eCCCCCcccc-cCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEE
Q 014603 190 INPGNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLV 268 (422)
Q Consensus 190 ~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~ 268 (422)
...++..|.. +|++.+++|.++|++||+++|+||+|.++..+|.... ...++..++ +.+++|.++ .|+++|.++
T Consensus 186 Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~~a-~~~~gv~PD---i~t~gK~lg-~G~p~~av~ 260 (395)
T PRK03715 186 EPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLFA-YELSGIEPD---IMTLGKGIG-GGVPLAALL 260 (395)
T ss_pred eCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcchhh-HhhcCCCCc---eeeehhhhh-CCcceEEEE
Confidence 5446667765 4688999999999999999999999998777775421 122232222 345689975 579999998
Q ss_pred eeCCCCcccchhHHHHHHhhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcC---CCCCCCCCC
Q 014603 269 TSDPNGILQDSGIVDSIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEI---PCITCPKKP 345 (422)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---~~~~~~~~~ 345 (422)
+++ ++..........+.+.+++..+++.+.|+...+ ++..++++++.+++++.|+++ .++. . ..
T Consensus 261 ~~~--------~i~~~~~~~~~~T~~g~pl~~aaala~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~~~i~-~-vr 327 (395)
T PRK03715 261 AKA--------EVAVFEAGDQGGTYNGNPLMTAVGVAVISQLLA---PGFLEGVRARGEYLKEKLLELSEERGLE-G-ER 327 (395)
T ss_pred Ecc--------ccccccCCCcCCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHhhcCCcC-e-EE
Confidence 863 333211112223446678888888888876432 334556666666666666543 1232 1 22
Q ss_pred CCceEEEEecCcccccCCCCHHHHHHHHHHhc---CeEEecCCCCCCCCeEEEEec--cChHHHHHHHHHHHHHHHHh
Q 014603 346 EGSMFVMVKLNYSLLEGINSDMEFALKLAKEE---SVIVLPGITVGLKDWLRITFA--VEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 346 ~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~l~~~~~~~ 418 (422)
..|.++.+.+... ....+ ...+.+. |+.+.+.. .+.+|++++ ++++++++++++|+++++++
T Consensus 328 G~Glm~~i~l~~~------~~~~~-~~~~~~~~~~Gi~~~~~~----~~~lR~~p~l~~t~~ei~~~~~~l~~~l~~~ 394 (395)
T PRK03715 328 GEGLLRALLLGKD------IGPQI-VEKARDMQPDGLLLNAPR----PNLLRFMPALNVTTEEIDQMIAMLRSVLDKL 394 (395)
T ss_pred cceeEEEEEecCc------hHHHH-HHHHHhccCCCEEEeecC----CCEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 3466777766431 12222 2333444 99987532 368999998 78999999999999998764
No 231
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.92 E-value=1.4e-22 Score=192.51 Aligned_cols=228 Identities=18% Similarity=0.158 Sum_probs=164.6
Q ss_pred CCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccch----HHHHhhCCCeEEEee
Q 014603 87 VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYY----EARATHSHLEVRHFD 162 (422)
Q Consensus 87 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~----~~~~~~~g~~~~~~~ 162 (422)
+....|++.++++. ..+..++++||++|+..++.+++++||+|+++.+.|.+. ...++..|++++.++
T Consensus 64 p~~~~Le~~lA~le--------g~~~al~~~sG~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd 135 (431)
T PRK08248 64 PTTDVFEKRIAALE--------GGIGALAVSSGQAAITYSILNIASAGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFVD 135 (431)
T ss_pred chHHHHHHHHHHHh--------CCCcEEEECCHHHHHHHHHHHHhCCCCEEEEccCchhhHHHHHHHHHHhCCEEEEEEC
Confidence 34678888899887 245788999999999999999999999999999998653 344566888888876
Q ss_pred ccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccC
Q 014603 163 LLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG 242 (422)
Q Consensus 163 ~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~ 242 (422)
. .|++.+++.++++++++++++|+||||.+++ +++|.++|+++|+++|+|++++. +....++ .++
T Consensus 136 ~-------~d~e~l~~ai~~~tklV~l~sp~NPtG~v~d---i~~I~~la~~~gi~vIvD~t~a~----~~~~~pl-~~g 200 (431)
T PRK08248 136 P-------SDPENFEAAITDKTKALFAETIGNPKGDVLD---IEAVAAIAHEHGIPLIVDNTFAS----PYLLRPI-EHG 200 (431)
T ss_pred C-------CCHHHHHHhcCCCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEeCCCCc----cccCChh-HcC
Confidence 4 3788999999889999999999999999965 67888999999999999999863 2222222 233
Q ss_pred CCCCeEEEecCccccCCCCceeEEEEeeCCCCcccc-------------------------hhH-HHHHHhhh-hhccCc
Q 014603 243 SIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQD-------------------------SGI-VDSIKSFL-NISSDP 295 (422)
Q Consensus 243 ~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~-------------------------~~~-~~~~~~~~-~~~~~~ 295 (422)
.| +++.|++|.++++|.++|++++......... +.+ ........ ......
T Consensus 201 aD---ivv~S~tK~lgg~g~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l 277 (431)
T PRK08248 201 AD---IVVHSATKFIGGHGTSIGGVIVDSGKFDWKGSGKFPGLTEPDPSYHGLVYTDAVGEAAYITKARVQLLRDLGAAL 277 (431)
T ss_pred CC---EEEEcCccccCCCCCceEEEEEeCCccccccccccccccCCccccccchhhhhhchhhHHHHHHHHHHHhcCCCC
Confidence 33 8889999999999999999877533211000 000 00111111 122345
Q ss_pred chHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 014603 296 ATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKP 345 (422)
Q Consensus 296 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 345 (422)
++...+.+..-|+. +..+.++..++...+.+.|+++|.+..+.+|
T Consensus 278 ~p~~a~l~~rgl~t-----l~~R~~~~~~nA~~la~~L~~~p~v~~V~yP 322 (431)
T PRK08248 278 SPFNSFLLLQGLET-----LHLRMERHSENALAVAKFLEEHEAVEWVSYP 322 (431)
T ss_pred CHHHHHHHhcCcCc-----HHHHHHHHHHHHHHHHHHHHhCCCcceEECC
Confidence 55555655555554 6677788889999999999998876544444
No 232
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.92 E-value=9.2e-23 Score=195.17 Aligned_cols=347 Identities=18% Similarity=0.145 Sum_probs=217.7
Q ss_pred cCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHH
Q 014603 42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ 121 (422)
Q Consensus 42 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 121 (422)
.+|+.++||..|......+ ..+|++.+++.+++.......+. ....+.+..+++.+.+..+ ...+.++|+++|++
T Consensus 39 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~q~~~~~~~~~~--~~~~~~~~~la~~l~~~~p--~~~~~v~f~~sGse 113 (423)
T PRK05964 39 ADGRELIDAISSWWVATHG-HNHPYIDQAIREQLDRLDHVIFA--GFTHEPAERLAQRLVALTP--GGLDHVFFSDSGSV 113 (423)
T ss_pred CCCCEEEEcchhHHhccCC-CCCHHHHHHHHHHHhhCCCcccc--ccCCHHHHHHHHHHHHhCC--CCCCEEEEeCCcHH
Confidence 3689999999886554333 45789999999998763221111 1112444556666654332 23468999999999
Q ss_pred HHHHHHHHhcC-------CC-CEEEecCCCccchHHHHhhCCC-------------eEEEeeccCCCCcccCHHHHHHhh
Q 014603 122 AIEVILTVLAR-------PG-ANILLPRPGFPYYEARATHSHL-------------EVRHFDLLPAKGWEVDLDAVEALA 180 (422)
Q Consensus 122 a~~~~~~~l~~-------~g-d~Vl~~~~~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~d~~~l~~~~ 180 (422)
|++.+++.... +| .+|+....+||+....+..... .+..++....+....+++.+++.+
T Consensus 114 A~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~l 193 (423)
T PRK05964 114 AVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGYEQATLDALEALL 193 (423)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcchhHHHHHHHHHHHH
Confidence 99999886421 23 6899999999987544432211 111222211110011267777777
Q ss_pred cC--CceEEEEeCC--CCCcccc-cCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCcc
Q 014603 181 DE--NTVALVIINP--GNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISK 255 (422)
Q Consensus 181 ~~--~~~~i~i~~p--~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK 255 (422)
.. +..+.++..| +..+|.. ++.+++++|.++|++||+++|+||++.++.++|... .....+..++ +.+++|
T Consensus 194 ~~~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~-a~~~~~v~pD---i~~~~K 269 (423)
T PRK05964 194 EKHAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTGTLF-ACEQAGVSPD---IMCLSK 269 (423)
T ss_pred HhCCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchh-HHHhcCCCCC---eeeeeh
Confidence 42 3445556666 5667765 488999999999999999999999998887766432 1122222222 345689
Q ss_pred ccCCCCceeEEEEeeCCCCcccchhHHHHHHhh-------hhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHH
Q 014603 256 RWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSF-------LNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADI 328 (422)
Q Consensus 256 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~ 328 (422)
.++.+++++|+++++ +++.+.+... ...+.+.++++.+++.++|+...+ ++..+++.++.+.
T Consensus 270 ~l~gG~~p~~av~~~--------~~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~l~~---~~~~~~~~~~g~~ 338 (423)
T PRK05964 270 GLTGGYLPLAATLCT--------AEIFEAFYSDDRAKAFMHSPSYTANPLACAAANASLDLFED---EPVLERVAALSAG 338 (423)
T ss_pred hhhcCcccceEEEEc--------HHHHHhhhcCCcccccccCCCCCcCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHH
Confidence 976555899998875 5677776431 112335788888888888875332 2234455555555
Q ss_pred HHHHhhcC---CCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHH
Q 014603 329 CCDRLKEI---PCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSA 403 (422)
Q Consensus 329 l~~~L~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~ 403 (422)
+++.|+++ |.+. . ....|.+..+.+..... . .....+...+ .++||.+.+. .+.+|++++ +++++
T Consensus 339 l~~~l~~l~~~~~i~-~-vrg~Gl~~~i~l~~~~~-~-~~~~~l~~~l-~~~Gv~v~~~-----~~~lR~~p~l~~t~ed 408 (423)
T PRK05964 339 LAEGLEPFRDLPGVA-D-VRVLGAIGAVELDRPVL-E-RDGPALRAFA-LERGVLLRPL-----GNTIYLMPPYIITAEE 408 (423)
T ss_pred HHHHHHhhccCCCeE-E-eecccEEEEEEeccCcc-h-hHHHHHHHHH-HHCCeEEEec-----CCEEEEeCCcccCHHH
Confidence 66555544 3222 1 12335666666643210 0 0133455544 5679999874 257999988 89999
Q ss_pred HHHHHHHHHHHHHHh
Q 014603 404 LEDGLGRMKAFYDRH 418 (422)
Q Consensus 404 l~~~~~~l~~~~~~~ 418 (422)
|++++++++++++++
T Consensus 409 Id~~v~~l~~al~~~ 423 (423)
T PRK05964 409 LDRITDAIVEVADEL 423 (423)
T ss_pred HHHHHHHHHHHHhhC
Confidence 999999999998763
No 233
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.92 E-value=2.2e-22 Score=191.20 Aligned_cols=348 Identities=15% Similarity=0.116 Sum_probs=211.6
Q ss_pred cCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCC-CCCEEE-ecCH
Q 014603 42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLS-PDDVYL-TLGC 119 (422)
Q Consensus 42 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~-~~~i~~-~~g~ 119 (422)
.+|+.+|||..|......+ ..+|.+.+++.+++..... ........+.+..+++.|.+....+.. .+.++| +++|
T Consensus 32 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~ql~~~~~--~~~~~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sG 108 (412)
T TIGR02407 32 EDGKEYIDFFAGAGALNYG-HNNPKLKQALIDYLADDGI--IHSLDMATEAKREFLETFNEIILKPRGLDYKVQFPGPTG 108 (412)
T ss_pred CCCCEEEEcccchhhccCC-CCCHHHHHHHHHHHhhccc--eeccccCcHHHHHHHHHHHHhccCccCCCceEEEeCCCc
Confidence 4689999999887554332 4689999999999875211 111111234555566666542110111 124655 5899
Q ss_pred HHHHHHHHHHhcC--CCCEEEecCCCccchHHHHhhC-CC------------eEEEeeccCCCCc-ccCHHHHHHhhcC-
Q 014603 120 TQAIEVILTVLAR--PGANILLPRPGFPYYEARATHS-HL------------EVRHFDLLPAKGW-EVDLDAVEALADE- 182 (422)
Q Consensus 120 ~~a~~~~~~~l~~--~gd~Vl~~~~~~~~~~~~~~~~-g~------------~~~~~~~~~~~~~-~~d~~~l~~~~~~- 182 (422)
++|++.+++.... ...+|+....+||+....+... +. .+..+|....... .-+++.+++.+.+
T Consensus 109 seA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~ 188 (412)
T TIGR02407 109 TNAVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDS 188 (412)
T ss_pred hHHHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHhc
Confidence 9999999886532 2368999999999886544422 11 1122221100000 0135667776642
Q ss_pred ----CceEEEEeCC-CCCccc-ccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccc
Q 014603 183 ----NTVALVIINP-GNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKR 256 (422)
Q Consensus 183 ----~~~~i~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~ 256 (422)
+..+.++..| +++.|. .+|.+.+++|.++|++||+++|+||++.++.++|... .....+..++ +.+++|.
T Consensus 189 ~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~-a~~~~~v~PD---i~~~~K~ 264 (412)
T TIGR02407 189 SSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGTFF-SFEPAGIEPD---IVCLSKS 264 (412)
T ss_pred cCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhH-HhcccCCCCC---EEEechh
Confidence 2335556666 778887 5788999999999999999999999999887776532 1222222223 3356899
Q ss_pred cCCCCceeEEEEeeCCCCcccchhHHHHHHhh-hhhccCcchHHHHHHHHHHhh-chHHHHHHHHHHHHHHHHHHHHHh-
Q 014603 257 WIVPGWRLGWLVTSDPNGILQDSGIVDSIKSF-LNISSDPATFIQGAVPQILEK-TEEEFFSKITDILRETADICCDRL- 333 (422)
Q Consensus 257 ~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~~l~~~L- 333 (422)
++..|+|+|++++++ ++ +.+... ...+.+.+++..+++.+.++. ..+.. ..+++++..+++++.|
T Consensus 265 lg~~G~pigav~~~~--------~~-~~~~~~~~~~T~~gnpl~~aaa~a~l~~~i~~~~---l~~~~~~~g~~l~~~l~ 332 (412)
T TIGR02407 265 ISGYGLPLALTLIKP--------EL-DVWKPGEHNGTFRGNNLAFVTATAALEYYWSDDA---FEKAVQRKSEIIQERLD 332 (412)
T ss_pred ccCCccceeEEEEch--------hh-hccCCCccCCCCCccHHHHHHHHHHHHHHhcccH---HHHHHHHHHHHHHHHHH
Confidence 644399999999863 23 322211 223446777877777777763 22221 2223333333333333
Q ss_pred ---hcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHH
Q 014603 334 ---KEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGL 408 (422)
Q Consensus 334 ---~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~ 408 (422)
+.++++. ...+..|.++|+.++... ...++...+ .++||.+.+.... .+.+|++++ .+++++++++
T Consensus 333 ~l~~~~~~~~-~~vrg~Gl~~~l~l~~~~-----~~~~~~~~~-~~~Gv~v~~~~~~--~~~lr~~p~l~~t~~~i~~~~ 403 (412)
T TIGR02407 333 RIVAEYPELI-KQVRGRGLMQGIECGDGD-----LAGKIAKAA-FENGLIIETSGPN--DEVIKLLPPLTIDEETLQQGL 403 (412)
T ss_pred HHHhhCCCce-EeeecceeEEEEEecChH-----HHHHHHHHH-HHCCCEEeccCCC--CCEEEEECCCCCCHHHHHHHH
Confidence 3344322 224566899999996421 133444444 5679999874321 478999998 7899999999
Q ss_pred HHHHHHHHH
Q 014603 409 GRMKAFYDR 417 (422)
Q Consensus 409 ~~l~~~~~~ 417 (422)
++|++++++
T Consensus 404 ~~l~~~l~~ 412 (412)
T TIGR02407 404 DILEQAVEE 412 (412)
T ss_pred HHHHHHHhC
Confidence 999998864
No 234
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.92 E-value=1.2e-22 Score=190.90 Aligned_cols=283 Identities=18% Similarity=0.168 Sum_probs=195.2
Q ss_pred CHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHH----HHhhCCCeEEEeecc
Q 014603 89 ILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEA----RATHSHLEVRHFDLL 164 (422)
Q Consensus 89 ~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~----~~~~~g~~~~~~~~~ 164 (422)
..++++.++++++ .+.++++++++.|++.++. ++++||+|+++.+.|.++.. .+...|++++.++.
T Consensus 49 ~~~le~~la~l~g--------~~~~l~~~sG~~al~~~l~-ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~- 118 (378)
T TIGR01329 49 RTALESLLAKLDK--------ADRAFAFSSGMAALDVITR-LLNNGDEIIAGDDLYGGTDRLLTQVVPRSGVVVVHVDT- 118 (378)
T ss_pred HHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHH-HhCCCCEEEEcCCCchHHHHHHHHHHHHcCcEEEEeCC-
Confidence 5677777887762 2567777888889998776 77999999999999987644 34567888888764
Q ss_pred CCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCC
Q 014603 165 PAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSI 244 (422)
Q Consensus 165 ~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~ 244 (422)
.|++.+++.++++++++++++|+||+|.+. ++++|+++|+++|+++|+|+++.. +....++ .++.|
T Consensus 119 ------~d~~~le~~i~~~tklv~le~psnptg~v~---dl~~I~~la~~~g~~vivD~a~~~----~~~~~~l-~~g~D 184 (378)
T TIGR01329 119 ------TDLDKVKAALGPKTKLVLLESPTNPLQKIV---DIRKISEMAHAQNALVVVDNTMMS----PLLCNPL-ELGAD 184 (378)
T ss_pred ------CCHHHHHHhcCcCceEEEEECCCCCCCeee---cHHHHHHHHHHcCCEEEEECCCcc----cccCChh-hcCCc
Confidence 278899999988999999999999999995 589999999999999999999854 2222233 23333
Q ss_pred CCeEEEecCccccCCC-CceeEEEEeeCCCCcccchhHHHHHHhhhhh-ccCcchHHHHHHHHHHhhchHHHHHHHHHHH
Q 014603 245 VPVLTLGSISKRWIVP-GWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQGAVPQILEKTEEEFFSKITDIL 322 (422)
Q Consensus 245 ~~~i~i~s~sK~~~~~-G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~ 322 (422)
+++.|++|.++++ +...|++++++ +++.+++...... ....++...+.+...++. +..+.++.
T Consensus 185 ---i~v~S~tK~l~G~~~~~~G~v~~~~-------~~~~~~~~~~~~~~G~~~~~~~a~l~~~~l~t-----l~~R~e~~ 249 (378)
T TIGR01329 185 ---IVYHSATKFLAGHSDVMAGVLAVKG-------EEIAKKVYFLQNSTGSGLAPFDCWLLLRGIKT-----LAIRIEKQ 249 (378)
T ss_pred ---EEEEecceeccCCccceeEEEEeCc-------HHHHHHHHHHHHhcCCcCCHHHHHHHHccCCC-----HHHHHHHH
Confidence 8999999987654 47789998754 3455666655542 234444544443334433 66667777
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCC----------------CceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCC
Q 014603 323 RETADICCDRLKEIPCITCPKKPE----------------GSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGIT 386 (422)
Q Consensus 323 ~~~~~~l~~~L~~~~~~~~~~~~~----------------~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~ 386 (422)
.++...+.+.|+++|.+..+..|. .|..+.+.+... ....+++..| +..++.+.-|..
T Consensus 250 ~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~~~-----~~~~~~~~~L-~~~~i~~s~G~~ 323 (378)
T TIGR01329 250 QENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETGSV-----ALSKRLVEAT-KLFSITVSFGSV 323 (378)
T ss_pred HHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEECCH-----HHHHHHHHhC-cCcccccCCCCC
Confidence 788888888888776553222221 123444555211 1244565655 666777766654
Q ss_pred CC----------------------C-CCeEEEEeccChHHHHHHHHHHHHHHHHh
Q 014603 387 VG----------------------L-KDWLRITFAVEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 387 ~~----------------------~-~~~iRis~~~~~~~l~~~~~~l~~~~~~~ 418 (422)
.. . ++.||+|++. |+.+.++..|++++++.
T Consensus 324 ~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl--E~~~dl~~dl~~al~~~ 376 (378)
T TIGR01329 324 NSLISMPCFMSHASIPAEVREERGLPEDLVRLSVGI--EDVDDLISDLDIAFVTA 376 (378)
T ss_pred CceeeCCCccccccCCHHHHHhcCCCCCeEEEEecc--CCHHHHHHHHHHHHHhc
Confidence 21 0 3689999997 46777788888887653
No 235
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.92 E-value=1.8e-22 Score=188.13 Aligned_cols=286 Identities=19% Similarity=0.167 Sum_probs=194.5
Q ss_pred CCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCC
Q 014603 87 VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPA 166 (422)
Q Consensus 87 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 166 (422)
+...+|+++++++. ..+++++++|+++|+.+++. ++++||+|+++.+.|.+............ .+..
T Consensus 54 p~~~~le~~lA~le--------g~~~~v~~~sG~aAi~~~l~-~l~~GD~VI~~~~~yg~~~~~~~~~~~~~-~~~~--- 120 (364)
T PRK07269 54 PTRAKLEETLAAIE--------SADYALATSSGMSAIVLAFS-VFPVGSKVVAVRDLYGGSFRWFNQQEKEG-RFHF--- 120 (364)
T ss_pred ccHHHHHHHHHHHh--------CCCeEEEeCCHHHHHHHHHH-HhCCCCEEEEecCCcCchHHHHHHHHhcC-cEEE---
Confidence 45789999999998 45789999999999999984 56899999999999976554333211000 0111
Q ss_pred CCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCC
Q 014603 167 KGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP 246 (422)
Q Consensus 167 ~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~ 246 (422)
.+..|++.+++.++++++++++++|+||+|.+. ++++|+++|+++|+++|+|++|....+ ..++ ..+.|
T Consensus 121 -~~~~d~~~l~~~i~~~TklV~lesP~NPtg~~~---di~~I~~la~~~gi~vvvD~t~~~~~~----~~pl-~~gaD-- 189 (364)
T PRK07269 121 -TYANTEEELIAAIEEDTDIVYIETPTNPLMVEF---DIEKVAKLAHAKGAKVIVDNTFYSPIY----QRPI-ELGAD-- 189 (364)
T ss_pred -EecCCHHHHHHhcCcCceEEEEECCCCCCCeee---CHHHHHHHHHHcCCEEEEECCCccccc----CCch-hhCCc--
Confidence 123588999999988999999999999999884 789999999999999999999754221 1222 23333
Q ss_pred eEEEecCccccCCCCc-eeEEEEeeCCCCcccchhHHHHHHhhhhh-ccCcchHHHHHHHHHHhhchHHHHHHHHHHHHH
Q 014603 247 VLTLGSISKRWIVPGW-RLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQGAVPQILEKTEEEFFSKITDILRE 324 (422)
Q Consensus 247 ~i~i~s~sK~~~~~G~-r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 324 (422)
+++.|++|.+++.|- =.|++++++ +++.+++...... ....+++..+.+...|+. +..+.++.++
T Consensus 190 -ivv~S~tK~l~g~~d~~gG~v~~~~-------~~l~~~~~~~~~~~G~~~s~~~a~l~~~~L~t-----L~~r~~~~~~ 256 (364)
T PRK07269 190 -IVLHSATKYLSGHNDVLAGVVVTND-------LELYEKLFYNLNTTGAVLSPFDSYLLMRGLKT-----LSLRMERSTA 256 (364)
T ss_pred -EEEecCceeccCCCcccceEEEeCc-------HHHHHHHHHHHHHhCCCCCHHHHHHHHcCCCc-----HHHHHHHHHH
Confidence 899999999876442 357777754 4566766644432 235577777777666765 7778888899
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHH---------HHhcCeEEecCCCCC-------
Q 014603 325 TADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKL---------AKEESVIVLPGITVG------- 388 (422)
Q Consensus 325 ~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l---------~~~~gi~v~~g~~~~------- 388 (422)
+...+.+.|+++|.+..+.+|..|-.+.+.+... .....+...+ .....+.+.|+..+.
T Consensus 257 na~~~a~~L~~~p~v~~v~ypg~gg~~sf~~~~~-----~~~~~f~~~l~~~~~~~slG~~~sl~~~p~~~~~~~~~~~~ 331 (364)
T PRK07269 257 NAQEVVAFLKKSPAVKEVLYTGKGGMISFKVADE-----TRIPHILNSLKVFTFAESLGGVESLITYPTTQTHADIPAEV 331 (364)
T ss_pred HHHHHHHHHHhCCCccEEeCCCcCcEEEEEECCH-----HHHHHHHHhCCcceEccCCCCcCeEeeCCcccccccCCHHH
Confidence 9999999999998875455454443444444321 0112222221 112244444543221
Q ss_pred -----C-CCeEEEEeccChHHHHHHHHHHHHHHH
Q 014603 389 -----L-KDWLRITFAVEPSALEDGLGRMKAFYD 416 (422)
Q Consensus 389 -----~-~~~iRis~~~~~~~l~~~~~~l~~~~~ 416 (422)
. ++.||+|++. |+.+.++..|+++++
T Consensus 332 r~~~Gi~~~liRlsvGl--E~~~dli~dl~~al~ 363 (364)
T PRK07269 332 RHSYGLTDDLLRLSIGI--EDARDLIADLKQALE 363 (364)
T ss_pred HHhcCCCCCeEEEEecc--CCHHHHHHHHHHHhc
Confidence 1 4689999997 367777777777763
No 236
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=99.92 E-value=8e-24 Score=182.70 Aligned_cols=378 Identities=19% Similarity=0.200 Sum_probs=269.9
Q ss_pred CCCcCccccHHHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCC-CcHHHHHHHHHHhhCCCCCCCCCCC
Q 014603 9 GNQWGFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFR-TASVAVDAIVHSVRSARFNCYSSTV 87 (422)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~ 87 (422)
.+||+. ++...+++.|-++.+.++++ ..+..|||+.|...+..+-| ..|.|++|=.+.+.....-.|.|..
T Consensus 24 ~~s~~s----~V~maPpDpILGVTeAfk~D----~n~~KiNLgvGaYRdd~gKp~vL~~VrkAE~ql~~~~ldKEYlpI~ 95 (427)
T KOG1411|consen 24 ASSWWS----HVEMAPPDPILGVTEAFKKD----PNPKKINLGVGAYRDDNGKPYVLPSVRKAEQQLASLSLDKEYLPIT 95 (427)
T ss_pred ccchhh----cCCCCCCCCcccHHHHHhcC----CCcceeeecccceecCCCCeeeeHHHHHHHHHHhhhcccchhcccc
Confidence 345554 57889999999999988876 46778999999876545544 4778888877766654455899999
Q ss_pred CCHHHHHHHHHHHhhcCCCCCCCCCEEE--ecCHHHHHHHHHHHh--cCCCCEEEecCCCccchHHHHhhCCCeEEEeec
Q 014603 88 GILPARRAIADYLNRDLPYKLSPDDVYL--TLGCTQAIEVILTVL--ARPGANILLPRPGFPYYEARATHSHLEVRHFDL 163 (422)
Q Consensus 88 g~~~lr~~ia~~l~~~~~~~~~~~~i~~--~~g~~~a~~~~~~~l--~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~ 163 (422)
|++++.+..++++-.....-+..++|+. |-+||.|+.+....+ .-++..|.+++|+|.+...+.+..|+.+..+..
T Consensus 96 Gl~eF~k~sakLa~G~~s~~ik~~Ri~tvQ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh~~if~~ag~~~~~yrY 175 (427)
T KOG1411|consen 96 GLAEFNKLSAKLALGDNSPVIKEKRIVTVQTLSGTGALRVGAEFLARFYPSRDIYIPDPTWGNHKNIFKDAGLPVKFYRY 175 (427)
T ss_pred chHHHHHHHHHHhhcCCchhhhccceeEEEeccCcchhhHHHHHHHhhccccceeecCCcccccCccccccCcceeeeee
Confidence 9999999999998543333345566754 456888888876655 346889999999999999999999999877776
Q ss_pred cCCCCcccCHHHHHHhhcCCc-eEEEEe--CCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCC--CCCc
Q 014603 164 LPAKGWEVDLDAVEALADENT-VALVII--NPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTP--FVPM 238 (422)
Q Consensus 164 ~~~~~~~~d~~~l~~~~~~~~-~~i~i~--~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~--~~~~ 238 (422)
......++|.+.+.+-+..-+ ..++++ ..|||||+-++.++|++|.++.++.+.+-+.|.+|.++.-+... ...+
T Consensus 176 yd~~t~gld~~g~ledl~~~p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~av 255 (427)
T KOG1411|consen 176 YDPKTRGLDFKGMLEDLGEAPEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAV 255 (427)
T ss_pred ccccccccchHHHHHHHhcCCCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhcccccCCchhhHHHH
Confidence 555556788877655444321 223333 34999999999999999999999999999999999987643221 1112
Q ss_pred cccCCC-CCeEEEecCccccCCCCceeEEE--EeeCCCCcccchhHHHHHHhhh-hhccCcchHHHHHHHHHHhhch--H
Q 014603 239 GVFGSI-VPVLTLGSISKRWIVPGWRLGWL--VTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQGAVPQILEKTE--E 312 (422)
Q Consensus 239 ~~~~~~-~~~i~i~s~sK~~~~~G~r~G~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~--~ 312 (422)
..+..+ .++++..|+.|.+|+.|-|+|.+ ++.+.+ .. ..+..+++... ...++|+.....++..+|.+.. .
T Consensus 256 R~F~~~g~~~~laQSyAKNMGLYgERvGa~svvc~~ad-~A--~rV~SQlk~liRpmYSnPP~hGArIv~~Il~d~~l~~ 332 (427)
T KOG1411|consen 256 RLFVEDGHEILLAQSYAKNMGLYGERVGALSVVCKDAD-EA--KRVESQLKILIRPMYSNPPLHGARIVATILSDPDLKN 332 (427)
T ss_pred HHHHHcCCceEeehhhhhhcchhhhccceeEEEecCHH-HH--HHHHHHHHHHhcccccCCCccchhhhhhccCChHHHH
Confidence 222222 34788899999999999999997 443311 11 12333333333 2456788888888888888743 4
Q ss_pred HHH---HHHHHHHHHHHHHHHHHhhcC--CC-CCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCC
Q 014603 313 EFF---SKITDILRETADICCDRLKEI--PC-ITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGIT 386 (422)
Q Consensus 313 ~~~---~~~~~~~~~~~~~l~~~L~~~--~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~ 386 (422)
+|+ +....++...++.+.+.|+.. ++ |. .+..+-|+|.+..+. .+.++.+.+++.|+++.-.
T Consensus 333 ~W~~evk~MadRi~~mR~~L~d~L~~~gs~~~W~-hI~~QIGMF~fTgl~----------peQv~~l~ke~~iYmT~dG- 400 (427)
T KOG1411|consen 333 QWLGEVKGMADRIISMRQQLFDALEKEGSPGNWS-HITKQIGMFCFTGLN----------PEQVDWLTKEYHIYLTKDG- 400 (427)
T ss_pred HHHHHHHHHHHhhhhhHHHHhHHhhcCCCCccHH-HHHHhhheeeecCCC----------HHHHHHHHhhheeeeccCc-
Confidence 443 444567778888888888874 22 33 334566899887773 3567888899999987532
Q ss_pred CCCCCeEEEEec-cChHHHHHHHHHHHHHHH
Q 014603 387 VGLKDWLRITFA-VEPSALEDGLGRMKAFYD 416 (422)
Q Consensus 387 ~~~~~~iRis~~-~~~~~l~~~~~~l~~~~~ 416 (422)
|||++ .+...+..+.++|.++.+
T Consensus 401 -------RiS~aG~ss~nV~yLa~aih~vtk 424 (427)
T KOG1411|consen 401 -------RISMAGLSSSNVPYLADAIHAVTK 424 (427)
T ss_pred -------eEeeccccccCCcccchhhHhHhc
Confidence 99997 677788888888777654
No 237
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.92 E-value=2.5e-22 Score=191.20 Aligned_cols=159 Identities=24% Similarity=0.207 Sum_probs=129.2
Q ss_pred CCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccch----HHHHhhCCCeEEEee
Q 014603 87 VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYY----EARATHSHLEVRHFD 162 (422)
Q Consensus 87 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~----~~~~~~~g~~~~~~~ 162 (422)
....++++.++++++ .+..++++||++|+..++.+++++||+|+++.+.|++. ...+...|++++.++
T Consensus 57 p~~~~le~~lA~l~g--------~~~~v~~~sG~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v~ 128 (418)
T TIGR01326 57 PTTDVLEQRIAALEG--------GVAALAVASGQAAITYAILNLAQAGDNIVSSSYLYGGTYNLFKHTLKRLGIEVRFVD 128 (418)
T ss_pred hhHHHHHHHHHHHhC--------CCeEEEEccHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHHHHHcCcEEEEEC
Confidence 346789999999982 35688999999999999999999999999999998654 344566788888776
Q ss_pred ccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccC
Q 014603 163 LLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG 242 (422)
Q Consensus 163 ~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~ 242 (422)
. .|++.+++.++++++++++++|+||+|.+. ++++|.++|+++|+++|+|++|+... ...++ ..+
T Consensus 129 ~-------~d~~~l~~~l~~~t~~V~le~p~NPtg~v~---dl~~I~~la~~~~i~livD~t~~~~~----~~~~l-~~g 193 (418)
T TIGR01326 129 P-------DDPEEFEKAIDENTKAVFAETIGNPAINVP---DIEAIAEVAHAHGVPLIVDNTFATPY----LCRPI-DHG 193 (418)
T ss_pred C-------CCHHHHHHhcCcCCeEEEEECCCCCCCeec---CHHHHHHHHHHcCCEEEEECCCchhh----cCCch-hcC
Confidence 3 178999999988899999999999999985 57888999999999999999987421 11111 122
Q ss_pred CCCCeEEEecCccccCCCCceeEEEEeeC
Q 014603 243 SIVPVLTLGSISKRWIVPGWRLGWLVTSD 271 (422)
Q Consensus 243 ~~~~~i~i~s~sK~~~~~G~r~G~~~~~~ 271 (422)
..+++.|++|.++++|+|+|+++++.
T Consensus 194 ---~Divv~S~sK~l~g~G~~lGg~v~~~ 219 (418)
T TIGR01326 194 ---ADIVVHSATKYIGGHGTAIGGVIVDG 219 (418)
T ss_pred ---CeEEEECccccccCCccceEEEEEec
Confidence 34999999999999999999999864
No 238
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.92 E-value=5.3e-22 Score=186.65 Aligned_cols=301 Identities=19% Similarity=0.206 Sum_probs=202.4
Q ss_pred HHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHh-cCCCCEEEecCCCccch
Q 014603 69 DAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVL-ARPGANILLPRPGFPYY 147 (422)
Q Consensus 69 ~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l-~~~gd~Vl~~~~~~~~~ 147 (422)
+++.+.+..+. |.......++++.++++++ .+++++++||++|+..++.++ .++||+|+++.++|+.+
T Consensus 3 ~~~~~~~~~~~---~~~~~~~~~~~~~la~~~~--------~~~~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~ 71 (352)
T cd00616 3 EAVEEVLDSGW---LTLGPKVREFEKAFAEYLG--------VKYAVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVAT 71 (352)
T ss_pred HHHHHHHHcCC---ccCCHHHHHHHHHHHHHhC--------CCeEEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHH
Confidence 44555555432 2333457899999999983 356888899999999999998 58999999999999999
Q ss_pred HHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccc
Q 014603 148 EARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDH 227 (422)
Q Consensus 148 ~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~ 227 (422)
...+...|.+++.+++++ .++.+|++.+++.++++++++++++ ++|... ++++|.++|+++|+++|+|++|+.
T Consensus 72 ~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~v~~~~---~~G~~~---~~~~i~~l~~~~~i~li~D~a~~~ 144 (352)
T cd00616 72 ANAILLLGATPVFVDIDP-DTYNIDPELIEAAITPRTKAIIPVH---LYGNPA---DMDAIMAIAKRHGLPVIEDAAQAL 144 (352)
T ss_pred HHHHHHcCCeEEEEecCC-CcCCcCHHHHHHhcCcCCeEEEEEC---CCCCcC---CHHHHHHHHHHcCCeEEEECCCCC
Confidence 888889999999998854 3567899999999888888888764 688874 578888889999999999999985
Q ss_pred ccc-CCCCCCCccccCCCCCeEEEecCc--cccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhhhc------------
Q 014603 228 LAF-GNTPFVPMGVFGSIVPVLTLGSIS--KRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNIS------------ 292 (422)
Q Consensus 228 ~~~-~~~~~~~~~~~~~~~~~i~i~s~s--K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 292 (422)
... .+. .+.... .+.+.|++ |++ ++.+.|++++++ +++.++++......
T Consensus 145 g~~~~~~---~~~~~~----d~~~~S~~~~K~~--~~~~gg~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (352)
T cd00616 145 GATYKGR---KVGTFG----DAGAFSFHPTKNL--TTGEGGAVVTND-------EELAERARLLRNHGRDRDRFKYEHEI 208 (352)
T ss_pred CCeECCE---EcccCc----ceeEEcCCCCCCC--cccCceEEEECC-------HHHHHHHHHHHHcCCCCCCCccccce
Confidence 321 111 111111 25677766 986 333458888754 35666655432211
Q ss_pred ----cCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC----CceEEEEecCcccccCCC
Q 014603 293 ----SDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPE----GSMFVMVKLNYSLLEGIN 364 (422)
Q Consensus 293 ----~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~ 364 (422)
...+.+..+.+... ...+++..++.+++.+++.+.|++++++.+...+. ....+.+.++.. ...
T Consensus 209 ~~~~~~~~~~~aa~~~~~-----l~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 280 (352)
T cd00616 209 LGYNYRLSEIQAAIGLAQ-----LEKLDEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPE---AGE 280 (352)
T ss_pred eeeccCcCHHHHHHHHHH-----HHhhHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECCc---CCC
Confidence 01122222222222 23467777888899999999999988887442222 112333344320 012
Q ss_pred CHHHHHHHHHHhcCeEEecCCCCCC-----------------------CCeEEEEec--cChHHHHHHHHHHH
Q 014603 365 SDMEFALKLAKEESVIVLPGITVGL-----------------------KDWLRITFA--VEPSALEDGLGRMK 412 (422)
Q Consensus 365 ~~~~~~~~l~~~~gi~v~~g~~~~~-----------------------~~~iRis~~--~~~~~l~~~~~~l~ 412 (422)
+..++...| +++||.+........ .+.+|+++. ++++|++.+++.|+
T Consensus 281 ~~~~v~~~L-~~~gI~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 281 SRDELIEAL-KEAGIETRVHYPPLHHQPPYKKLLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred CHHHHHHHH-HHCCCCeeeecCccccCHhhhhccCCCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence 456666665 566997653221100 267999998 78999999988763
No 239
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.92 E-value=1.2e-21 Score=183.78 Aligned_cols=309 Identities=18% Similarity=0.258 Sum_probs=200.0
Q ss_pred cHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHh-cCCCCEEEecCC
Q 014603 64 ASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVL-ARPGANILLPRP 142 (422)
Q Consensus 64 ~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l-~~~gd~Vl~~~~ 142 (422)
.++..+++.+.+..+.. ++......++++.+++++ ..+++++|+|+++|+.+++.++ +++||+|+++.+
T Consensus 10 ~~~e~~a~~~~~~~~~~--~~~g~~~~~~e~~la~~~--------g~~~~v~~~sgt~aL~~~l~al~~~pGd~Viv~~~ 79 (376)
T TIGR02379 10 TGQELEYIAEAISEGKL--SGDGPFSRRCETWLENRT--------GTKKALLTPSCTAALEMAALLLDIQPGDEVIMPSY 79 (376)
T ss_pred CHHHHHHHHHHHHcCCc--cCCcHHHHHHHHHHHHHh--------CCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCC
Confidence 35667888888876433 222222356666666665 3468999999999999999887 799999999999
Q ss_pred CccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEc
Q 014603 143 GFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIAD 222 (422)
Q Consensus 143 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D 222 (422)
+|.++...+...|++++.+++++ +++.+|++.+++.+++++++++ |+||+|... ++++|.++|+++|++||+|
T Consensus 80 t~~~~~~~~~~~G~~~v~vd~d~-~~~~~d~~~le~~i~~~tk~Ii---p~~~~G~~~---d~~~I~~la~~~~i~vIeD 152 (376)
T TIGR02379 80 TFVSTANAFVLRGAKIVFVDIRP-DTMNIDETLIESAITHRTKAIV---PVHYAGVAC---DMDTIMALANKHQLFVIED 152 (376)
T ss_pred CcHHHHHHHHHcCCEEEEEecCC-CcCCCCHHHHHHhcCcCceEEE---EeCCCCCcc---CHHHHHHHHHHCCCEEEEE
Confidence 99999888888999999999875 4477999999999988888876 667889885 5778899999999999999
Q ss_pred ccccccc-cCCCCCCCccccCCCCCeEEEecCc--cccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhhhcc------
Q 014603 223 EVYDHLA-FGNTPFVPMGVFGSIVPVLTLGSIS--KRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISS------ 293 (422)
Q Consensus 223 ~~~~~~~-~~~~~~~~~~~~~~~~~~i~i~s~s--K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 293 (422)
++|+.+. +.+... ..+. .+.++||+ |.+ .+|.+.|++++++ +++.++++.......
T Consensus 153 aa~~~g~~~~~~~~---g~~~----~~~~fSf~~~K~l-~~g~~gG~v~~~~-------~~~~~~~~~~~~~g~~~~~~~ 217 (376)
T TIGR02379 153 AAQGVMSTYKGRAL---GSIG----HLGTFSFHETKNY-TSGGEGGALLIND-------QAFIERAEIIREKGTNRSQFF 217 (376)
T ss_pred CccccCCccCCccc---CCCC----CEEEEeCCCCCcC-cccCCceEEEECC-------HHHHHHHHHHHHhCCCCcccc
Confidence 9998754 444322 2221 13444443 664 5677789999875 567777766543210
Q ss_pred ----------------CcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCC--C-CCCCCCCCCc----eE
Q 014603 294 ----------------DPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIP--C-ITCPKKPEGS----MF 350 (422)
Q Consensus 294 ----------------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--~-~~~~~~~~~g----~~ 350 (422)
..+.+..+.+...| ..+++..++-++..+...+.|++++ + +.....|.+. .+
T Consensus 218 ~~~~~~~~~~~~g~n~~~~~~~Aa~g~~qL-----~~l~~~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~ 292 (376)
T TIGR02379 218 RGEVDKYTWRDIGSSYLPSELQAAYLWAQL-----EQADRINQDRLATWQLYQDALKPLEEKGIIELPSIPNGCQHNAHM 292 (376)
T ss_pred ccCCCcceeeeecccCCccHHHHHHHHHHH-----HHhHHHHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCCCeeeeEE
Confidence 11111222222223 3355555555666666777776653 1 2211112221 23
Q ss_pred EEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCC----------CC------------CCeEEEEec--cChHHHHH
Q 014603 351 VMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITV----------GL------------KDWLRITFA--VEPSALED 406 (422)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~----------~~------------~~~iRis~~--~~~~~l~~ 406 (422)
+++.++.. .+..++...| +++||.+.++... .. ...+.+-+. .++++++.
T Consensus 293 ~~i~~~~~-----~~r~~l~~~L-~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~~~~~~~~~l~LP~~~~l~~~~~~~ 366 (376)
T TIGR02379 293 FYIKLKDE-----DDRNELIKYL-KEQEIMAVFHYVPLHSSPAGRYFGRFHGEDIYTTKESERLVRLPLYYGLSKEDQAR 366 (376)
T ss_pred EEEEECCc-----CCHHHHHHHH-HHCCCCccccCcCCCcchhHHhhCCCCCCChHHHHHHhceEEccCCCCCCHHHHHH
Confidence 34555431 1345565555 6779987743210 00 123444443 67899999
Q ss_pred HHHHHHHHH
Q 014603 407 GLGRMKAFY 415 (422)
Q Consensus 407 ~~~~l~~~~ 415 (422)
.++.|++++
T Consensus 367 i~~~i~~~~ 375 (376)
T TIGR02379 367 VIQTICDYL 375 (376)
T ss_pred HHHHHHHHh
Confidence 999998764
No 240
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.92 E-value=5.2e-22 Score=187.33 Aligned_cols=214 Identities=18% Similarity=0.140 Sum_probs=153.4
Q ss_pred CCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchH----HHHhhCCCeEEEeec
Q 014603 88 GILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYE----ARATHSHLEVRHFDL 163 (422)
Q Consensus 88 g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~----~~~~~~g~~~~~~~~ 163 (422)
...+++++++++.+ .+ . .+++++|+.++..++. ++++||+|+++++.|++.. ..++..|++++.++.
T Consensus 55 ~~~~le~~lA~l~g------~~-~-~v~~~sG~~ai~~~l~-~l~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~~ 125 (390)
T PRK08064 55 TREALEDIIAELEG------GT-K-GFAFASGMAAISTAFL-LLSKGDHVLISEDVYGGTYRMITEVLSRFGIEHTFVDM 125 (390)
T ss_pred hHHHHHHHHHHHhC------CC-C-eEEECCHHHHHHHHHH-HhCCCCEEEEccCccchHHHHHHHHHHHcCCEEEEECC
Confidence 46788999999983 23 3 4555666889988886 6789999999999997532 445568888888764
Q ss_pred cCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCC
Q 014603 164 LPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS 243 (422)
Q Consensus 164 ~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~ 243 (422)
.|++.+++.++++++++++++|+||||.+. ++++|.++|+++|+++|+|++|..... ..++ .++.
T Consensus 126 -------~d~~~l~~~l~~~tklV~l~~p~NptG~~~---dl~~I~~la~~~g~~vvvD~a~~~~~~----~~~~-~~g~ 190 (390)
T PRK08064 126 -------TNLEEVAQNIKPNTKLFYVETPSNPLLKVT---DIRGVVKLAKAIGCLTFVDNTFLTPLL----QKPL-DLGA 190 (390)
T ss_pred -------CCHHHHHHhcCCCceEEEEECCCCCCcEec---cHHHHHHHHHHcCCEEEEECCCCcccc----cCch-hhCC
Confidence 267899999988999999999999999995 678888899999999999999875321 1122 2333
Q ss_pred CCCeEEEecCccccCC-CCceeEEEEeeCCCCcccchhHHHHHHhhhhhcc-CcchHHHHHHHHHHhhchHHHHHHHHHH
Q 014603 244 IVPVLTLGSISKRWIV-PGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISS-DPATFIQGAVPQILEKTEEEFFSKITDI 321 (422)
Q Consensus 244 ~~~~i~i~s~sK~~~~-~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~ 321 (422)
.+++.|++|.+++ +|...|++++.+ +++.++++......+ ..++...+.+..-++ .+..+.++
T Consensus 191 ---Divv~S~tK~~~G~~~~laG~~v~~~-------~~~~~~l~~~~~~~g~~~~~~~a~l~~~gl~-----tl~~R~~~ 255 (390)
T PRK08064 191 ---DVVLHSATKFLAGHSDVLAGLAVVKD-------EELAQKLYFLQNSFGAVLGVQDCWLVLRGLK-----TLHVRLEH 255 (390)
T ss_pred ---cEEEeecceeccCCccceeEEEEeCC-------HHHHHHHHHHHHhcCCCCCHHHHHHHHcccC-----cHHHHHHH
Confidence 3889999999864 345678777653 467777776665332 333333333222222 25667777
Q ss_pred HHHHHHHHHHHhhcCCCCC
Q 014603 322 LRETADICCDRLKEIPCIT 340 (422)
Q Consensus 322 ~~~~~~~l~~~L~~~~~~~ 340 (422)
..++...+.+.|+++|.+.
T Consensus 256 ~~~~a~~la~~L~~~~~v~ 274 (390)
T PRK08064 256 SSETANKIALYLQEHPKVQ 274 (390)
T ss_pred HHHHHHHHHHHHhcCCCcc
Confidence 7888888888888876543
No 241
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=99.92 E-value=2.5e-22 Score=171.14 Aligned_cols=370 Identities=18% Similarity=0.176 Sum_probs=260.6
Q ss_pred hhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCC-cHHHHHHHHHHhhCCC-CCCCCCCCCCHHHHHHHHH
Q 014603 21 KTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRT-ASVAVDAIVHSVRSAR-FNCYSSTVGILPARRAIAD 98 (422)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~-~~~v~~a~~~~~~~~~-~~~y~~~~g~~~lr~~ia~ 98 (422)
...++..+..+...+.+. ..+..+||++|...+..+.|+ .|.|.++=.....+.. ...|.|..|++.++...++
T Consensus 10 ~~a~p~~vf~~~~~y~~d----~~p~KvnL~igAYRtd~g~PWvLPvVk~~e~~i~~d~s~NHEYLpi~Gl~~F~~~A~e 85 (410)
T KOG1412|consen 10 PVAPPIEVFKLNASYGED----LDPVKVNLGIGAYRTDDGKPWVLPVVKKAEKKIANDQSLNHEYLPILGLPTFTKAATE 85 (410)
T ss_pred ccCChHHHHhhHHHhccc----CCcceeecccceEEcCCCCeeEehhhhhhhhhccCchhccchhccccCchhhhhhhHH
Confidence 334444455555444443 356679999998665555554 4555544433333322 3478898999999999999
Q ss_pred HHhhcCCCCCCCCCEE--EecCHHHHHHHHHHHhc--CCCCEEEecCCCccchHHHHhhCC-CeEEEeeccCCCCcccCH
Q 014603 99 YLNRDLPYKLSPDDVY--LTLGCTQAIEVILTVLA--RPGANILLPRPGFPYYEARATHSH-LEVRHFDLLPAKGWEVDL 173 (422)
Q Consensus 99 ~l~~~~~~~~~~~~i~--~~~g~~~a~~~~~~~l~--~~gd~Vl~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~d~ 173 (422)
.+-......+..++++ -+-|||.|+.+....+. -...+|.+..|+|.....+++..| ..+..++....+.-.+|.
T Consensus 86 l~lg~~s~a~kE~Rv~~vQslsGTGAl~~~A~Fl~~~~~~~~VY~SnPTW~nH~~if~~aGf~tv~~Y~yWd~~~k~~d~ 165 (410)
T KOG1412|consen 86 LLLGADSPAIKEDRVFGVQSLSGTGALRIAADFLATFYNKNTVYVSNPTWENHHAIFEKAGFTTVATYPYWDAENKCVDL 165 (410)
T ss_pred HhcCCCchhhhhccccceeeccccchhhhhHHHHHHhcccceeEecCCchhHHHHHHHHcCCceeeeeeeecCCCceecH
Confidence 8865444445556653 45678999988776552 245689999999999999999999 457777776666667899
Q ss_pred HHHHHhhcC--CceEEEEeCC-CCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccc---cCCC-CC
Q 014603 174 DAVEALADE--NTVALVIINP-GNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGV---FGSI-VP 246 (422)
Q Consensus 174 ~~l~~~~~~--~~~~i~i~~p-~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~---~~~~-~~ 246 (422)
+.+...++. ....+++..+ +||||.-++.|+|.+|+++.++.+.+.+.|-+|.++.-++.. .+..+ +..+ ..
T Consensus 166 e~~Lsdl~~APe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~-~DawAiR~fV~~g~e 244 (410)
T KOG1412|consen 166 EGFLSDLESAPEGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLD-ADAWAIRYFVEQGFE 244 (410)
T ss_pred HHHHHHHhhCCCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhhcccccCCcc-ccHHHHHHHHhcCCe
Confidence 988876643 3344555555 999999999999999999999999999999999987654322 12111 1111 23
Q ss_pred eEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHh----hh-hhccCcchHHHHHHHHHHhhch--HHH---HH
Q 014603 247 VLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKS----FL-NISSDPATFIQGAVPQILEKTE--EEF---FS 316 (422)
Q Consensus 247 ~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~a~~~~l~~~~--~~~---~~ 316 (422)
++++.||+|.||+.+-|+|-+..--+ ++..+..+.. .. ...+.|+.....++.+.|.... ++| ++
T Consensus 245 ~fv~QSFaKNfGlYneRvGnltvv~~-----n~a~i~~v~SQl~lviR~~~SNPPAyGArIV~kvL~tP~lre~W~~sik 319 (410)
T KOG1412|consen 245 LFVCQSFAKNFGLYNERVGNLTVVVN-----NPAVIAGVKSQLTLVIRSNWSNPPAYGARIVHKVLSTPELREQWIQSIK 319 (410)
T ss_pred EEEEhhhhhhcccccccccceEEEec-----ChhHHHHHHHHHHHHHhhccCCCcchhhHHHHHHhcCHHHHHHHHHHHH
Confidence 78999999999999999998744211 1344444433 32 2456888889999999998744 444 44
Q ss_pred HHHHHHHHHHHHHHHHhhcC--CC-CCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeE
Q 014603 317 KITDILRETADICCDRLKEI--PC-ITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWL 393 (422)
Q Consensus 317 ~~~~~~~~~~~~l~~~L~~~--~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~i 393 (422)
....++++.|..|++.|..+ || |. .+..+.|+|-+..+. + ..++.|.+++.|++.+..
T Consensus 320 ~MssRI~~MR~aLrd~L~aL~TPGtWD-HI~~QiGMFSyTGLt---------p-~qV~~li~~h~vyLl~~G-------- 380 (410)
T KOG1412|consen 320 TMSSRIKKMRTALRDHLVALKTPGTWD-HITQQIGMFSYTGLT---------P-AQVDHLIENHKVYLLSDG-------- 380 (410)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHH-HHHhhccceeecCCC---------H-HHHHHHHHhceEEEecCC--------
Confidence 45567888888888888876 55 44 446677988886663 3 356788889999988754
Q ss_pred EEEec-cChHHHHHHHHHHHHHHHHhc
Q 014603 394 RITFA-VEPSALEDGLGRMKAFYDRHA 419 (422)
Q Consensus 394 Ris~~-~~~~~l~~~~~~l~~~~~~~~ 419 (422)
||+++ .....++...++|.++++.+.
T Consensus 381 RInisGLN~~NveyVAkAIde~Vr~~~ 407 (410)
T KOG1412|consen 381 RINISGLNMKNVEYVAKAIDETVRAIK 407 (410)
T ss_pred cEeeeccccccHHHHHHHHHHHHHhhc
Confidence 99998 677889999999999888764
No 242
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.92 E-value=2.2e-22 Score=177.34 Aligned_cols=325 Identities=16% Similarity=0.194 Sum_probs=219.0
Q ss_pred eeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHH
Q 014603 48 IPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVIL 127 (422)
Q Consensus 48 i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~ 127 (422)
++|.+.... .+.|+++++|.+.-. .....|+..+....+++.+++.+. .+.++|+++||+++.+++
T Consensus 2 ~~f~SDn~~-----g~~~~m~eam~~a~~-~~~~~YG~D~~~~~~e~~~ae~~g--------~~a~~Fv~sGT~aN~lal 67 (342)
T COG2008 2 IDFRSDNVA-----GPTPEMREALAAANA-VGDDVYGEDPTTNALEQRIAELFG--------KEAALFVPSGTQANQLAL 67 (342)
T ss_pred CccccCccC-----CCCHHHHHHHHhccc-cCCCCCCCCHHHHHHHHHHHHHhC--------CceEEEecCccHHHHHHH
Confidence 456555433 467899999998753 234579988888899999999882 378999999999999999
Q ss_pred HHhcCCCCEEEecCCCccchHH--HHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC------CceEEEEeCCCCCcccc
Q 014603 128 TVLARPGANILLPRPGFPYYEA--RATHSHLEVRHFDLLPAKGWEVDLDAVEALADE------NTVALVIINPGNPCGNV 199 (422)
Q Consensus 128 ~~l~~~gd~Vl~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~i~i~~p~nptG~~ 199 (422)
.+.++||+.|++..-.|-.... ....++ +...+++.+..+..+++++++..+.+ .+..+++.+.+|..|++
T Consensus 68 ~~~~~~~~~vi~~~~aHi~~~E~Ga~~~~~-~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtV 146 (342)
T COG2008 68 AAHCQPGESVICHETAHIYTDECGAPEFFG-GGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTV 146 (342)
T ss_pred HHhcCCCCeEEEeccccceecccCcHHHHc-CCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCcee
Confidence 9999999999999988854432 122222 23344455556678999999997653 34566666666688999
Q ss_pred cCHHHHHHHHHHHHHcCcEEEEcccccc--cccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCccc
Q 014603 200 YTYQHLQKIAETAKKLGIMVIADEVYDH--LAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQ 277 (422)
Q Consensus 200 ~~~~~l~~i~~~~~~~~~~li~D~~~~~--~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~ 277 (422)
+|.+++++|.++|+++|+.|+.|.+--. +...+ .+...+...-+ ++..++||..+.+ +|.++..+
T Consensus 147 y~l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg---~~~~~~~~~~D-~v~~~~tK~g~~~---~gAiv~gn------ 213 (342)
T COG2008 147 YPLDELEAISAVCKEHGLPLHMDGARLANALVALG---VALKTIKSYVD-SVSFCLTKGGGAP---VGAIVFGN------ 213 (342)
T ss_pred cCHHHHHHHHHHHHHhCCceeechHHHHHHHHHcC---CCHHHHHhhCC-EEEEecccCCcce---eeeEEEcC------
Confidence 9999999999999999999999999532 22222 22222222112 4555789996445 48887765
Q ss_pred chhHHHHHHhhhhhcc---CcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEe
Q 014603 278 DSGIVDSIKSFLNISS---DPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVK 354 (422)
Q Consensus 278 ~~~~~~~~~~~~~~~~---~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~ 354 (422)
++++++++..+-..+ .-..+..+....+|++ ........+-.+....|.+.|...||+.+. .|...+.+++.
T Consensus 214 -~~~~~~a~~~rK~~Ggl~~k~r~laA~~~~~l~~---~~~~~~~~Han~mA~~La~~~~~~~G~~~~-~~~~tN~vf~~ 288 (342)
T COG2008 214 -RDFAKRARRWRKRAGGLMRKARFLAAQGLYALED---DVWRLAADHANAMAARLAEGLEAKPGVKLA-FPVETNMVFVR 288 (342)
T ss_pred -HHHHHHHHHHHHHhcccHhhhhHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHhhhhcCCceec-cCCcccEEEEE
Confidence 567777765543222 2234445555555654 222333344455688889999988898844 66667888898
Q ss_pred cCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHHHHHHH
Q 014603 355 LNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGRMKAFY 415 (422)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~l~~~~ 415 (422)
++.... +.... ...+...|+.+.++. ..+|+..+ ++++++++++..++.++
T Consensus 289 l~~~~i----~~l~~-~~~~~~~~~~~~~~~-----~~vRfvts~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 289 LPESAI----EALRL-AGALFYRGVLIGAHG-----EIVRFVTSWATSEEDVDELVAAIKALL 341 (342)
T ss_pred CChHHH----HHHHh-hchhheeeeeccCCC-----ceEEEEeeccCCHHHHHHHHHHHHHhh
Confidence 975211 11111 112233355554432 46899887 88999999999988764
No 243
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.91 E-value=6.9e-22 Score=187.71 Aligned_cols=228 Identities=21% Similarity=0.193 Sum_probs=161.0
Q ss_pred CCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhh----CCCeEEEee
Q 014603 87 VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATH----SHLEVRHFD 162 (422)
Q Consensus 87 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~----~g~~~~~~~ 162 (422)
+...+|++.++++.+ .+..+++++|++|+..++.+++++||+|+++.+.|++....... .|+++..++
T Consensus 58 pt~~~Le~~lA~l~g--------~~~~l~~ssG~~Ai~~al~al~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d 129 (425)
T PRK06084 58 PTNDVLEQRVAALEG--------GVGALAVASGMAAITYAIQTIAEAGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFAA 129 (425)
T ss_pred chHHHHHHHHHHHhC--------CCceeEehhHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHhcccceeEEEEEC
Confidence 346788999999872 34567888999999999999999999999999999865444332 344544443
Q ss_pred ccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccC
Q 014603 163 LLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG 242 (422)
Q Consensus 163 ~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~ 242 (422)
. .|++.+++.++++++++++++|+||+|.+++ +++|.++|+++|+++|+|++|+... ...++ .++
T Consensus 130 ~-------~d~e~le~ai~~~tklV~lesp~NPtG~v~d---l~~I~~la~~~~i~vVvD~a~a~~~----~~~p~-~~g 194 (425)
T PRK06084 130 H-------DDIAALEALIDERTKAVFCESIGNPAGNIID---IQALADAAHRHGVPLIVDNTVATPV----LCRPF-EHG 194 (425)
T ss_pred C-------CCHHHHHHHhccCCcEEEEeCCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccc----cCChh-hcC
Confidence 1 3889999999888999999999999999975 7888899999999999999997422 11122 233
Q ss_pred CCCCeEEEecCccccCCCCceeEEEEeeCCCCcccc---------------------h-----hHHHHHH-h-hhhhccC
Q 014603 243 SIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQD---------------------S-----GIVDSIK-S-FLNISSD 294 (422)
Q Consensus 243 ~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~---------------------~-----~~~~~~~-~-~~~~~~~ 294 (422)
.| +++.|++|.++++|.++|.+++.++...... + ....... . .......
T Consensus 195 aD---ivv~S~tK~l~G~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~ 271 (425)
T PRK06084 195 AD---IVVHSLTKYIGGHGTSIGGIVVDSGKFPWAEHKERFALLNTPDPSYHGVTYTEAFGPAAFIGRCRVVPLRNMGAA 271 (425)
T ss_pred CC---EEEECchhcccccccceeEEEEeCCccchhhccccccccccCCcccccchhhhhcchHHHHHHHHHHHHHhcCCC
Confidence 33 9999999999999999888777432100000 0 0000000 0 1123345
Q ss_pred cchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 014603 295 PATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKP 345 (422)
Q Consensus 295 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 345 (422)
.++...+.+..-|+. +..+.++..++...+.+.|+++|.+..+.+|
T Consensus 272 l~~~~a~l~lrgl~t-----l~~R~~~~~~na~~la~~L~~~p~v~~V~yP 317 (425)
T PRK06084 272 LSPFNAFLILQGLET-----LALRMERHTENALKVARYLQQHPQVAWVKYA 317 (425)
T ss_pred CCHHHHHHHHcCcCc-----HHHHHHHHHHHHHHHHHHHHhCCCccEEECC
Confidence 566666666655655 6777888889999999999998876534343
No 244
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.91 E-value=7.3e-22 Score=186.09 Aligned_cols=229 Identities=17% Similarity=0.132 Sum_probs=163.1
Q ss_pred CCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHH----HhhCCCeEEEee
Q 014603 87 VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEAR----ATHSHLEVRHFD 162 (422)
Q Consensus 87 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~----~~~~g~~~~~~~ 162 (422)
+...+|++.++++.+ .+..+.++||++|+.+++.+++++||+|+++.++|.+.... ....|+++..+.
T Consensus 61 Ptv~~lE~~la~leg--------~~~av~~~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd 132 (432)
T PRK06702 61 PTLAAFEQKLAELEG--------GVGAVATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFN 132 (432)
T ss_pred cHHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEEC
Confidence 346889999999873 34678899999999999999999999999999999866554 567899888774
Q ss_pred ccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccC
Q 014603 163 LLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG 242 (422)
Q Consensus 163 ~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~ 242 (422)
. ..|++.+++++++++++|++.+|+||++.++ ++++|+++|+++|+++|+|+++.. +... ....++
T Consensus 133 ~------~~d~~~l~~~I~~~Tk~I~~e~pgnP~~~v~---Di~~I~~iA~~~gi~livD~T~~t----P~~~-~pl~~G 198 (432)
T PRK06702 133 P------NLTADEIVALANDKTKLVYAESLGNPAMNVL---NFKEFSDAAKELEVPFIVDNTLAT----PYLC-QAFEHG 198 (432)
T ss_pred C------CCCHHHHHHhCCcCCeEEEEEcCCCcccccc---CHHHHHHHHHHcCCEEEEECCCCc----hhhC-ChhhcC
Confidence 3 2688999999999999999999999999995 589999999999999999999852 1111 112334
Q ss_pred CCCCeEEEecCccccCCCCceeEEEEe----------eCCCCcc--------------cchhHHH--HHHhhhhhccCcc
Q 014603 243 SIVPVLTLGSISKRWIVPGWRLGWLVT----------SDPNGIL--------------QDSGIVD--SIKSFLNISSDPA 296 (422)
Q Consensus 243 ~~~~~i~i~s~sK~~~~~G~r~G~~~~----------~~~~~~~--------------~~~~~~~--~~~~~~~~~~~~~ 296 (422)
.+ |++.|+||.+++.+--+|-+++ ++..... .++++.. +......+....+
T Consensus 199 AD---Ivv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s 275 (432)
T PRK06702 199 AN---IIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVSYVQNFGAAAYIVKARVQLLRDYGNCMS 275 (432)
T ss_pred CC---EEEEccccccCCCcceeceEEEeCCCcccccccccccccccccccccchhhccchhhHHHHHHHHHHHHccCCCC
Confidence 43 9999999965544333332222 1111000 0011111 1112223345778
Q ss_pred hHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 014603 297 TFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKP 345 (422)
Q Consensus 297 ~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 345 (422)
++..+.+...|+. +..+.++..++...+.+.|+++|.+..+.+|
T Consensus 276 p~~a~l~~rgL~T-----l~lR~~r~~~Na~~la~~L~~~p~V~~V~yP 319 (432)
T PRK06702 276 PFNAYISNIGLET-----LHLRMERHSENALAVAKWLADHERIEWVNYP 319 (432)
T ss_pred HHHHHHHHhccCc-----HHHHHHHHHHHHHHHHHHHHhCCCcceEECC
Confidence 8888888777875 6667777789999999999988876544344
No 245
>PRK05939 hypothetical protein; Provisional
Probab=99.91 E-value=1.8e-21 Score=183.40 Aligned_cols=287 Identities=17% Similarity=0.138 Sum_probs=191.3
Q ss_pred CHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchH---HHHhhCCCeEEEeeccC
Q 014603 89 ILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYE---ARATHSHLEVRHFDLLP 165 (422)
Q Consensus 89 ~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~---~~~~~~g~~~~~~~~~~ 165 (422)
..++++.++++.+ .+..+++++|++|+..++.+++++||+|+++++.|++.. ..+...|++++.++.
T Consensus 49 ~~~lE~~la~leg--------~~~~v~~ssG~~Ai~~~l~all~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~-- 118 (397)
T PRK05939 49 TAALEAKITKMEG--------GVGTVCFATGMAAIAAVFLTLLRAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMVDA-- 118 (397)
T ss_pred HHHHHHHHHHHhC--------CCeEEEeCCHHHHHHHHHHHHcCCCCEEEECCCccccHHHHHHHHHhcCCEEEEECC--
Confidence 4488999999873 234566667799999999999999999999999987543 345667888887764
Q ss_pred CCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCC
Q 014603 166 AKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIV 245 (422)
Q Consensus 166 ~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~ 245 (422)
.|++.+++.++++++++++++|+||+|.+ .++++|+++|+++|+++|+|++|.... .. ....++.
T Consensus 119 -----~d~e~l~~~l~~~tklV~vesp~NptG~v---~dl~~I~~la~~~gi~livD~t~a~~~----~~-~~~~~ga-- 183 (397)
T PRK05939 119 -----TDVQNVAAAIRPNTRMVFVETIANPGTQV---ADLAGIGALCRERGLLYVVDNTMTSPW----LF-RPKDVGA-- 183 (397)
T ss_pred -----CCHHHHHHhCCCCCeEEEEECCCCCCCCH---HhHHHHHHHHHHcCCEEEEECCccccc----cc-CccccCC--
Confidence 37899999999999999999999999999 689999999999999999999986421 11 1112232
Q ss_pred CeEEEecCccccCCCCceeEEEEeeCCCCccc-chhH-------------HHHHHhhh--hhccCcchHHHHHHHHHHhh
Q 014603 246 PVLTLGSISKRWIVPGWRLGWLVTSDPNGILQ-DSGI-------------VDSIKSFL--NISSDPATFIQGAVPQILEK 309 (422)
Q Consensus 246 ~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~-~~~~-------------~~~~~~~~--~~~~~~~~~~~~a~~~~l~~ 309 (422)
.+++.|+||.+++.|.++|+++..+...... ...+ +..+.... ......++...+.+..-++.
T Consensus 184 -Divv~S~sK~~~g~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~rgl~t 262 (397)
T PRK05939 184 -SLVINSLSKYIAGHGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQWGLTQIRKKGLRDMGATLSSEAAHRIAIGAET 262 (397)
T ss_pred -EEEEecCeecccCCCCeEEEEEecCcccccccccchhhhhhccchhhHHHHHHHHHHHHhcCCCCCHHHHHHHHcCcCc
Confidence 3899999999999999999987743210000 0000 11121111 12234555555555555554
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC----------------CceEEEEecCcccccCCCCHHHHHHHH
Q 014603 310 TEEEFFSKITDILRETADICCDRLKEIPCITCPKKPE----------------GSMFVMVKLNYSLLEGINSDMEFALKL 373 (422)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~----------------~g~~~~~~~~~~~~~~~~~~~~~~~~l 373 (422)
+..+.++..++...+.+.|+.+|.+..+.+|. .|..+.+.+.. .. ...++
T Consensus 263 -----l~~R~~~~~~na~~la~~L~~~p~V~~V~yP~l~~~p~~~~~~~~~~g~g~l~sf~~~~--------~~-~~~~f 328 (397)
T PRK05939 263 -----LALRVDRSCSNALALAQFLEAHPKVARVYYPGLASHPQHARATELFRHYGGLLSFELAD--------GI-DCFDF 328 (397)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCchHHHHHHhccCCceEEEEEeCC--------HH-HHHHH
Confidence 56666777778889999999888765344442 24455556642 11 22333
Q ss_pred HHhcCeE-Eec--CCCC----------------------CC-CCeEEEEeccChHHHHHHHHHHHHHHHH
Q 014603 374 AKEESVI-VLP--GITV----------------------GL-KDWLRITFAVEPSALEDGLGRMKAFYDR 417 (422)
Q Consensus 374 ~~~~gi~-v~~--g~~~----------------------~~-~~~iRis~~~~~~~l~~~~~~l~~~~~~ 417 (422)
+++-.+. ..+ |... +. ++.||+|++.+ +.+.+++.|.+++++
T Consensus 329 ~~~l~l~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~lvR~svGlE--d~~dLi~dl~~Al~~ 396 (397)
T PRK05939 329 LNRLKLVIKATHLGDTRTLVIPVAPTIYYEMGAERRASMGIADSLIRVSVGIE--DEADLIADFEQALDA 396 (397)
T ss_pred HHhCCcceEccCCCCCCeeeecCcccccccCCHHHHHhcCCCCCeEEEEeCCC--CHHHHHHHHHHHHhc
Confidence 3433332 111 1100 00 36899999973 677778888888753
No 246
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.91 E-value=2.4e-21 Score=181.26 Aligned_cols=284 Identities=15% Similarity=0.148 Sum_probs=191.8
Q ss_pred CHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHH----HhhCCCeEEEeecc
Q 014603 89 ILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEAR----ATHSHLEVRHFDLL 164 (422)
Q Consensus 89 ~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~----~~~~g~~~~~~~~~ 164 (422)
...|++.++++.+ .+.+++++|+++|+..++.+++++||+|+++++.|+++... ....|+++..++.
T Consensus 52 ~~~lE~~lA~l~g--------~~~~~~~~sG~~Ai~~al~all~~GD~Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~d~- 122 (377)
T TIGR01324 52 HFALQDAMCELEG--------GAGCYLYPSGLAAVTNSILAFVKAGDHVLMVDSAYEPTRYFCDIVLKRMGVDITYYDP- 122 (377)
T ss_pred HHHHHHHHHHHhC--------CCcEEEECcHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHHHHHHHhcCcEEEEECC-
Confidence 4699999999872 45899999999999999999999999999999999876543 3456777665532
Q ss_pred CCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCC
Q 014603 165 PAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSI 244 (422)
Q Consensus 165 ~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~ 244 (422)
. +.+.+++.++++++++++++|+||+|.. .++++|+++|+++|+++|+|++|+.... ..++ .++.|
T Consensus 123 -~-----~~e~l~~~i~~~tklV~lesp~Np~g~~---~dl~~I~~la~~~g~~livD~t~a~g~~----~~pl-~~gaD 188 (377)
T TIGR01324 123 -L-----IGEDIATLIQPNTKVLFLEAPSSITFEI---QDIPAIAKAARNPGIVIMIDNTWAAGLL----FKPL-EHGVD 188 (377)
T ss_pred -C-----CHHHHHHhcCCCceEEEEECCCCCCCcH---HHHHHHHHHHHHcCCEEEEECCCccccc----cCcc-ccCce
Confidence 1 2278888888899999999999999888 7899999999999999999999986321 1122 23333
Q ss_pred CCeEEEecCccccCCC-CceeEEEEeeCCCCcccchhHHHHHHhhhh-hccCcchHHHHHHHHHHhhchHHHHHHHHHHH
Q 014603 245 VPVLTLGSISKRWIVP-GWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQGAVPQILEKTEEEFFSKITDIL 322 (422)
Q Consensus 245 ~~~i~i~s~sK~~~~~-G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~ 322 (422)
+++.|++|.+++. +...|+++++ ++..+++..... .....++...+.+...++. +..+.++.
T Consensus 189 ---ivv~S~tK~l~G~~d~~gG~v~~~--------~~~~~~l~~~~~~~G~~l~p~~a~~~~rgl~t-----l~~R~~~~ 252 (377)
T TIGR01324 189 ---ISIQAGTKYLVGHSDIMIGTVVAN--------ARTWDQLREHSYLMGQMVDADDAYTTLRGLRT-----LGVRLKQH 252 (377)
T ss_pred ---EEEecCceeccCCCCceEEEEEeC--------HHHHHHHHHHHHHhCCCCCHHHHHHHHhhhhh-----HHHHHHHH
Confidence 8999999998764 4677888764 345555553332 2334566666665555553 55567777
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCC----------------CceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCC
Q 014603 323 RETADICCDRLKEIPCITCPKKPE----------------GSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGIT 386 (422)
Q Consensus 323 ~~~~~~l~~~L~~~~~~~~~~~~~----------------~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~ 386 (422)
.++...+.+.|+++|.+.-+.+|. .|..+.++++... ......+++.+ +-.++.+.-|..
T Consensus 253 ~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~---~~~~~~~~~~l-~~~~~~~slG~~ 328 (377)
T TIGR01324 253 QESSLAIAKWLSEQPEVARVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQRLT---QKQVHAFLDHL-QLFGLGYSWGGY 328 (377)
T ss_pred HHHHHHHHHHHHhCCCcCEEECCCCCCCccHHHHHHhccCCCceEEEEECCCC---HHHHHHHHHhC-CcceEeccCCCc
Confidence 788888888999887664333442 2334455564210 00123333333 322332221211
Q ss_pred C------C-------------CCCeEEEEeccChHHHHHHHHHHHHHHHH
Q 014603 387 V------G-------------LKDWLRITFAVEPSALEDGLGRMKAFYDR 417 (422)
Q Consensus 387 ~------~-------------~~~~iRis~~~~~~~l~~~~~~l~~~~~~ 417 (422)
. . .++.||+|++.+ +.+.+++.|.++++.
T Consensus 329 ~sl~~~~~~~~~~~~~~~~~~~~~liR~svGlE--~~~dl~~dl~~al~~ 376 (377)
T TIGR01324 329 ESLALCNQPELGHRPNIKRNLEGPLIRVHIGLE--NVDDLKADLKAGFEA 376 (377)
T ss_pred cceeecCCCCCCHHHHHhccCCCCEEEEEeCCC--CHHHHHHHHHHHHhc
Confidence 0 0 135799999973 566777777777653
No 247
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.91 E-value=3.3e-21 Score=181.78 Aligned_cols=315 Identities=15% Similarity=0.132 Sum_probs=204.4
Q ss_pred HHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHh-cCCCCEEEecCCC
Q 014603 65 SVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVL-ARPGANILLPRPG 143 (422)
Q Consensus 65 ~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l-~~~gd~Vl~~~~~ 143 (422)
++-.+++.+.+..+.. .++ ....+++++++++++ .+++++++|+|+|+.+++.++ +++||+|+++.++
T Consensus 14 ~~e~~~~~~~l~~~~~-~~g--~~~~~le~~la~~~g--------~~~~v~~~sgt~al~lal~al~~~~Gd~Viv~~~~ 82 (379)
T PRK11658 14 DEELAAVKEVLRSGWI-TTG--PKNQALEQAFCQLTG--------NQHAIAVSSATAGMHITLMALGIGPGDEVITPSLT 82 (379)
T ss_pred HHHHHHHHHHHHcCCc-cCC--HhHHHHHHHHHHHhC--------CCeEEEECCHHHHHHHHHHHcCCCCCCEEEECCCc
Confidence 4557788887765432 233 347899999999993 246888999999999999998 7999999999999
Q ss_pred ccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcc
Q 014603 144 FPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADE 223 (422)
Q Consensus 144 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~ 223 (422)
|.++...+...|++++.+++++ +++.+|++.+++.+++++++++ |.|++|... ++++|.++|+++|+++|+|+
T Consensus 83 ~~~~~~~~~~~G~~~v~vd~~~-~~~~~d~~~l~~~i~~~tkav~---~~~~~G~~~---d~~~i~~~a~~~gi~vi~D~ 155 (379)
T PRK11658 83 WVSTLNMIVLLGATPVMVDVDR-DTLMVTPEAIEAAITPRTKAII---PVHYAGAPA---DLDAIRAIGERYGIPVIEDA 155 (379)
T ss_pred HHHHHHHHHHcCCEEEEEecCC-CcCCcCHHHHHHhcccCCeEEE---EeCCCCCcC---CHHHHHHHHHHcCCeEEEEC
Confidence 9999888889999999999864 4467899999999988888876 556789874 67888999999999999999
Q ss_pred cccc-cccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhhhccC--------
Q 014603 224 VYDH-LAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSD-------- 294 (422)
Q Consensus 224 ~~~~-~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 294 (422)
+|+. ..+.|. .+...+ +.+.||++...+++.+.|++++++ +++.++++........
T Consensus 156 a~a~g~~~~~~---~~g~~g-----~~~~Sf~~~K~l~~g~GG~v~~~~-------~~~~~~~~~~~~~G~~~~~~~~~~ 220 (379)
T PRK11658 156 AHAVGTYYKGR---HIGARG-----TAIFSFHAIKNITCAEGGLVVTDD-------DELADRLRSLKFHGLGVDAFDRQT 220 (379)
T ss_pred CCccCCeECCe---ecCCCC-----CEEEeCCCCCcCcccCceEEEECC-------HHHHHHHHHHHHcCCCcchhhhhc
Confidence 9985 223332 122222 235566644444556678888764 4566666543321100
Q ss_pred ------------cchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCC----ceE-EEEecCc
Q 014603 295 ------------PATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEG----SMF-VMVKLNY 357 (422)
Q Consensus 295 ------------~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~----g~~-~~~~~~~ 357 (422)
....-+..+.+++.......+++..++.+++.+.+.+.|++++... +..|.. .++ +.+.++.
T Consensus 221 ~~~~~~~~~~~~G~n~~~~~l~AAl~~~ql~~l~~~~~~r~~~a~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 299 (379)
T PRK11658 221 QGRAPQAEVLTPGYKYNLADINAAIALVQLAKLEALNARRREIAARYLQALADLPFQP-LSLPAWPHQHAWHLFIIRVDE 299 (379)
T ss_pred ccCCCcceeeccccccCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcc-CcCCCCCCceeEEEEEEEECC
Confidence 0000011112222222234577778888888888999998875433 212221 112 2233432
Q ss_pred ccccCCCCHHHHHHHHHHhcCeEEecCCC-------C---------CC-----CCeEEEEec--cChHHHHHHHHHHHHH
Q 014603 358 SLLEGINSDMEFALKLAKEESVIVLPGIT-------V---------GL-----KDWLRITFA--VEPSALEDGLGRMKAF 414 (422)
Q Consensus 358 ~~~~~~~~~~~~~~~l~~~~gi~v~~g~~-------~---------~~-----~~~iRis~~--~~~~~l~~~~~~l~~~ 414 (422)
.. .+ .+..++...| +++||.+..... | .. ...+-+-+. .++++++..++.|+++
T Consensus 300 ~~-~~-~~r~~~~~~L-~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lP~~~~l~~~~~~~i~~~i~~~ 376 (379)
T PRK11658 300 ER-CG-ISRDALMEAL-KERGIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICSLPLFPDMTDADVDRVITALQQI 376 (379)
T ss_pred cc-cc-CCHHHHHHHH-HHCCCCCcccCcCcccChhhhccCCCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHH
Confidence 10 01 1355666666 567987653210 0 00 233444433 6789999999999887
Q ss_pred HH
Q 014603 415 YD 416 (422)
Q Consensus 415 ~~ 416 (422)
+.
T Consensus 377 ~~ 378 (379)
T PRK11658 377 AG 378 (379)
T ss_pred Hh
Confidence 53
No 248
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.91 E-value=5.3e-22 Score=185.66 Aligned_cols=312 Identities=13% Similarity=0.099 Sum_probs=209.2
Q ss_pred CCCcHHHHHHHHHHhhCCC---CCCCCCC-------CCCHHHHHHHHHHHhhcCCCCCCCCCEEEecC-HHHHHHHHHHH
Q 014603 61 FRTASVAVDAIVHSVRSAR---FNCYSST-------VGILPARRAIADYLNRDLPYKLSPDDVYLTLG-CTQAIEVILTV 129 (422)
Q Consensus 61 ~~~~~~v~~a~~~~~~~~~---~~~y~~~-------~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g-~~~a~~~~~~~ 129 (422)
.+.|+.|++++.+.+.+.. -..|... .-+.+.|+.++++++. -++++++|++| +|++++.++.+
T Consensus 8 ~~~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~-----~~~~~vvf~~gs~T~a~~~~~~~ 82 (355)
T cd00611 8 AALPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNI-----PDNYKVLFLQGGATGQFAAVPLN 82 (355)
T ss_pred CCCCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCC-----CCCceEEEEcCCchHHHHHHHHh
Confidence 3678999999999874311 0111111 2356778888888831 14568999877 99999999999
Q ss_pred hcC---CCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccC-HHHHHHhhcCCceEEEEeCCCCCcccccCHHHH
Q 014603 130 LAR---PGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVD-LDAVEALADENTVALVIINPGNPCGNVYTYQHL 205 (422)
Q Consensus 130 l~~---~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d-~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l 205 (422)
+.. +||.|++ .+..+.+...++..|.+++.++.+...++ .+ ++..+..++++++++.+++..|.||+.++
T Consensus 83 l~~~~~~~~~i~~-g~~~~~~~~~a~~~g~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~lV~~~h~~t~tG~~~~---- 156 (355)
T cd00611 83 LLGDKGTADYVVT-GAWSAKAAKEAKRYGGVVVIVAAKEEGKY-TKIPDVETWDLAPDAAYVHYCSNETIHGVEFD---- 156 (355)
T ss_pred cCCCCCeEEEEEC-CHHHHHHHHHHHhcCCCcEEEecccccCC-CCCCCHhhcCCCCCCCEEEEeCCcccccEEcc----
Confidence 987 4455544 22223334577888988888886432222 13 23333445678999999999999999742
Q ss_pred HHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHH
Q 014603 206 QKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSI 285 (422)
Q Consensus 206 ~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~ 285 (422)
++++.+|+++++|.+++. |..+.++..++ +.+.|.+|.||.+| +|++++++ ++.+++
T Consensus 157 ----~i~~~~g~~~~VDa~qs~----g~~~idv~~~~-----~~~ss~~K~lGP~G--~g~l~~~~--------~~~~~~ 213 (355)
T cd00611 157 ----EVPDTGGVPLVADMSSNI----LSRPIDVSKFG-----VIYAGAQKNLGPAG--VTVVIVRK--------DLLGKA 213 (355)
T ss_pred ----eecccCCCeEEEEccccc----cCCCCCHHHhC-----EEEeecccccCCCc--eEEEEECH--------HHHhhc
Confidence 233458999999999987 54455555443 45677899988777 78888763 333332
Q ss_pred Hhh-------------hhhccCcchHHHHHHHHHHhhchHH-HHHHHHHHHHHHHHHHHHHhhcCCCCC-CCCCC--CCc
Q 014603 286 KSF-------------LNISSDPATFIQGAVPQILEKTEEE-FFSKITDILRETADICCDRLKEIPCIT-CPKKP--EGS 348 (422)
Q Consensus 286 ~~~-------------~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~--~~g 348 (422)
... ....++|+....+++.++|+...+. .++.+.++.+++.+++++.|+++|++. ....+ ..+
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~ 293 (355)
T cd00611 214 RKITPSMLNYKTHADNNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGFYRGPVDKRARSR 293 (355)
T ss_pred ccCCCCcccHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCccccccCCCHHHcCc
Confidence 221 1124578888888988898876666 689999999999999999999998763 12111 222
Q ss_pred eEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHHHHHH
Q 014603 349 MFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGRMKAF 414 (422)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~l~~~ 414 (422)
..+.+.++.. ....++.. .+.+.|+.+.++.. ..+.+|+|+. ++.+||+++++.|+++
T Consensus 294 ~vvsf~~~~~-----~l~~~~~~-~~~r~G~~~~~~~~--~~g~vR~S~~~~nt~edi~~l~~al~~~ 353 (355)
T cd00611 294 MNVPFRLGKE-----ELEKEFLK-EAEAAGMIGLKGHR--SVGGIRASIYNALSLEGVQALADFMKEF 353 (355)
T ss_pred eEEEEEcCCh-----hhhHHHHH-HHHHCCCcccCCCc--ccCeEEEEccCCCCHHHHHHHHHHHHHH
Confidence 3344455421 01233323 34567998666654 3478999998 6999999999998874
No 249
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.91 E-value=3.8e-22 Score=188.05 Aligned_cols=326 Identities=16% Similarity=0.091 Sum_probs=213.3
Q ss_pred ceeecCCCCCCCCCCCCcHH-HHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCC-CCCCEEEec-CHHHHH
Q 014603 47 LIPLGHGDPSAFPSFRTASV-AVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKL-SPDDVYLTL-GCTQAI 123 (422)
Q Consensus 47 ~i~l~~g~~~~~~~~~~~~~-v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~-~~~~i~~~~-g~~~a~ 123 (422)
.++|+.|.. .++|. |++++.+...........-..-+.+.|+.++++++ . ++++|++++ |+|.++
T Consensus 13 ~~~f~~Gp~------~~~~~~v~~a~~~~~~~~~hr~~~f~~~~~~~r~~l~~l~~------~~~~~~v~~~~gs~T~~~ 80 (378)
T PRK03080 13 DPRFSSGPC------KKRPGWQLEALADALLGRSHRQKPVKALLKRVIEGTRELLS------LPEGYEVGIVPGSDTGAW 80 (378)
T ss_pred CCCcCCCCc------CCChHHHHHHHHhhhcccCcCCHHHHHHHHHHHHHHHHHhC------CCCCceEEEECCchHHHH
Confidence 466766652 34556 99999876542111111112346778888888883 3 345788775 899999
Q ss_pred HHHHHHhcCC-CCEEEecCCCccc-hHH-HHhhCCC-eEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccc
Q 014603 124 EVILTVLARP-GANILLPRPGFPY-YEA-RATHSHL-EVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNV 199 (422)
Q Consensus 124 ~~~~~~l~~~-gd~Vl~~~~~~~~-~~~-~~~~~g~-~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~ 199 (422)
+.++.+++++ ++.|++ .-.|.. +.. .++..|. +++.++.+ .+..+|+++++. ++.+.+++.+|.||..
T Consensus 81 ~~~~~~l~~~~~~~vi~-~g~f~~~~~~~~~~~~g~~~v~~~~~~--~g~~~d~~~i~~-----~~~V~~~h~~t~tG~~ 152 (378)
T PRK03080 81 EMALWSLLGARRVDHLA-WESFGSKWATDVVKQLKLEDPRVLEAD--YGSLPDLSAVDF-----DRDVVFTWNGTTTGVR 152 (378)
T ss_pred HHHHHhcCCCCcceEEE-eCHHHHHHHHHHHhhcCCCCceEeccC--CCCCCCHhhcCC-----CCCEEEEecCCcccee
Confidence 9999999874 445554 445543 232 2356788 88877754 233467665432 4568899999999999
Q ss_pred cCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCC-CCceeEEEEeeCCCCcccc
Q 014603 200 YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIV-PGWRLGWLVTSDPNGILQD 278 (422)
Q Consensus 200 ~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~-~G~r~G~~~~~~~~~~~~~ 278 (422)
.| +++|++ +++|+++|+|.+++. |..+.++..+ | ++++|.+|++++ +| +|+++.+
T Consensus 153 ~p---i~~I~~--~~~g~~~vVDa~qs~----G~~pidv~~i--D---~~~~s~~K~l~~P~G--~g~l~v~-------- 208 (378)
T PRK03080 153 VP---VARWIG--ADREGLTICDATSAA----FALPLDWSKL--D---VYTFSWQKVLGGEGG--HGMAILS-------- 208 (378)
T ss_pred cc---chhhcc--ccCCCeEEEeccccc----ccCCCCHHHC--c---EEEEehhhhCCCCCc--eEEEEEC--------
Confidence 76 555555 688999999999987 4444455543 2 889999999755 66 7888876
Q ss_pred hhHHHHHHhh----------------------h--hhccCcchHHHHHHHHHHhhchHH-HHHHHHHHHHHHHHHHHHHh
Q 014603 279 SGIVDSIKSF----------------------L--NISSDPATFIQGAVPQILEKTEEE-FFSKITDILRETADICCDRL 333 (422)
Q Consensus 279 ~~~~~~~~~~----------------------~--~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L 333 (422)
++..+++... . ...++++.....++.++|+...+. .++.+.++.+++.+.+++.|
T Consensus 209 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l 288 (378)
T PRK03080 209 PRAVERLESYTPARPIPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAANASVLYDWA 288 (378)
T ss_pred HHHHHhhhcccCCCCCchhheeccchHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHH
Confidence 3344443321 0 012345555666667777765555 68889999999999999999
Q ss_pred hcCCCCCCCC-CCC--CceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHH
Q 014603 334 KEIPCITCPK-KPE--GSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGL 408 (422)
Q Consensus 334 ~~~~~~~~~~-~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~ 408 (422)
++++++.+.. .+. ++..+.+.++... . . ...++...++++ |+.+..|......+.+|+|++ ++++++++++
T Consensus 289 ~~~~~~~~~~~~~~~~s~~i~~~~~~~~~-~-~-~~~~~~~~l~~~-~i~v~~g~~~~~~~~vRis~~~~~t~~di~~l~ 364 (378)
T PRK03080 289 EKTPWATPLVADPATRSNTSVTLDFVDAQ-A-A-VDAAAVAKLLRE-NGAVDIEPYRDAPNGLRIWCGPTVEPADVEALT 364 (378)
T ss_pred HhCCCcccccCCccccCccEEEEEcCCch-H-H-HHHHHHHHHHHc-CCeeccccccCCCCcEEEecCCCCCHHHHHHHH
Confidence 9987665331 121 2234444554300 0 0 133455666554 888877653323578999998 7899999999
Q ss_pred HHHHHHHHHhcc
Q 014603 409 GRMKAFYDRHAK 420 (422)
Q Consensus 409 ~~l~~~~~~~~~ 420 (422)
+.|++++++++.
T Consensus 365 ~al~~~~~~~~~ 376 (378)
T PRK03080 365 PWLDWAFERLKA 376 (378)
T ss_pred HHHHHHHHHHhh
Confidence 999999887653
No 250
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.91 E-value=4.8e-21 Score=183.62 Aligned_cols=353 Identities=15% Similarity=0.114 Sum_probs=212.1
Q ss_pred cCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCC-EEEecCHH
Q 014603 42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDD-VYLTLGCT 120 (422)
Q Consensus 42 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~-i~~~~g~~ 120 (422)
.+|+.+|||..|......+ ..+|.+.+++.+++......... ....+.+..+++.|....+....... ++++++|+
T Consensus 36 ~dG~~ylD~~~g~~~~~lG-h~~p~i~~ai~~q~~~~~~~~~~--~~~~~~~~~lae~L~~~~p~~~~~~~~~f~~~sGs 112 (442)
T TIGR00709 36 VEGKEYLDFLAGAGTLALG-HNHPNMKQKILDYLQSGLPLHTL--DLTTPLKDAFIEALLNIIPKRKMDYKLQFPGPSGA 112 (442)
T ss_pred CCCCEEEEccccHhhhcCC-CCCHHHHHHHHHHHHhccCcccc--ccCcHHHHHHHHHHHHhCCCcCCCccEEEeCCCHH
Confidence 3689999999887553233 45789999999998763211111 11234555566666543321111124 45568999
Q ss_pred HHHHHHHHHhc--CCCCEEEecCCCccchHHHHhhC-CC------------eEEEeeccCCCC--cc----cCH----HH
Q 014603 121 QAIEVILTVLA--RPGANILLPRPGFPYYEARATHS-HL------------EVRHFDLLPAKG--WE----VDL----DA 175 (422)
Q Consensus 121 ~a~~~~~~~l~--~~gd~Vl~~~~~~~~~~~~~~~~-g~------------~~~~~~~~~~~~--~~----~d~----~~ 175 (422)
+|++.+++... ....+|+....+||+....+... +. .+..++...... ++ .+. +.
T Consensus 113 EA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (442)
T TIGR00709 113 DAVEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGIGGEAGSNASIEY 192 (442)
T ss_pred HHHHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCccccccccCCchhHHHHHHHH
Confidence 99999988643 22368999999999886554432 20 112222111000 00 011 12
Q ss_pred HHHhhc-----CCceEEEEeCC-CCCcc-cccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeE
Q 014603 176 VEALAD-----ENTVALVIINP-GNPCG-NVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVL 248 (422)
Q Consensus 176 l~~~~~-----~~~~~i~i~~p-~nptG-~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i 248 (422)
+++.+. .+..+.++..| ++..| ..+|++.++++.++|++||+++|.||++.++.++|... ....++..++++
T Consensus 193 ~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~-a~~~~gv~PDiv 271 (442)
T TIGR00709 193 FENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSGTMF-AFEHAGIEPDFV 271 (442)
T ss_pred HHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchh-HHHHcCCCCcEE
Confidence 333332 12344445555 54455 45899999999999999999999999999988877532 333344444444
Q ss_pred EEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHh-hhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHH
Q 014603 249 TLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKS-FLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETAD 327 (422)
Q Consensus 249 ~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~ 327 (422)
+ ++|.++. |+|+|++++++ + .+.+.. ....+.+.++++++++.++|+...+.. ..++++++.+
T Consensus 272 ~---~gK~l~~-G~Pigav~~~~--------~-~~~~~~~~~~~T~~gnpla~aaa~a~L~~i~~~~---l~~~~~~~g~ 335 (442)
T TIGR00709 272 V---MSKAVGG-GLPLAVLLIAP--------E-FDAWQPAGHTGTFRGNQLAMVTGTEALNYWKDDN---LAQNAQERGE 335 (442)
T ss_pred E---EcccccC-CcccEEEEEch--------H-HhccCCCcCCCCCCcCHHHHHHHHHHHHHHHhcC---HHHHHHHHHH
Confidence 4 5899765 89999999863 3 233221 123455789999999999997644322 3334555555
Q ss_pred HHHHHhhc----CCCCCCCCCCCCceEEEEecCccc-ccC----CC----CHHHHHHHHHHhcCeEEecCCCCCCCCeEE
Q 014603 328 ICCDRLKE----IPCITCPKKPEGSMFVMVKLNYSL-LEG----IN----SDMEFALKLAKEESVIVLPGITVGLKDWLR 394 (422)
Q Consensus 328 ~l~~~L~~----~~~~~~~~~~~~g~~~~~~~~~~~-~~~----~~----~~~~~~~~l~~~~gi~v~~g~~~~~~~~iR 394 (422)
++.+.|++ .|.+. . ...-|.++.+.+.... ... .. ....+. ..+.++|+++.+... ..+.+|
T Consensus 336 ~l~~~L~~l~~~~~~v~-~-vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~Gvl~~~~~~--~~~~l~ 410 (442)
T TIGR00709 336 RITSFLDDMIKEHPCIG-N-VRGRGLMQGIMIVDERQSKDATGAYPRDCELAAAIQ-GACFENGLLLETGGR--EGEVFR 410 (442)
T ss_pred HHHHHHHHHHHhCCCee-e-eeccceEEEEEEccCcccccccccCCcchHHHHHHH-HHHHHCCeEEeecCC--CCCEEE
Confidence 55555543 33332 1 2344677777774211 000 00 012333 334567999976432 147899
Q ss_pred EEec--cChHHHHHHHHHHHHHHHHhc
Q 014603 395 ITFA--VEPSALEDGLGRMKAFYDRHA 419 (422)
Q Consensus 395 is~~--~~~~~l~~~~~~l~~~~~~~~ 419 (422)
+.++ +++++++++++++++++.+..
T Consensus 411 ~~Ppl~it~~ei~~~~~~l~~~l~~~~ 437 (442)
T TIGR00709 411 LLCPITIDQEECEEGISRFKQAVEEAL 437 (442)
T ss_pred EECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9887 799999999999999997753
No 251
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.91 E-value=6.6e-21 Score=181.40 Aligned_cols=354 Identities=15% Similarity=0.084 Sum_probs=213.8
Q ss_pred cHHHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCC------CCCCCH
Q 014603 17 NEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYS------STVGIL 90 (422)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~------~~~g~~ 90 (422)
+..++... .+|+.+.+.-... ....++|--.. + ..+|.+++++...+.+....+++ ......
T Consensus 6 ~~~~~~~~-~~~~~~~~~~~~~-----~~~~~~l~~se-----n-~~~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~ 73 (416)
T PRK13034 6 SDSLEEYD-DEVFAAINKELER-----QQDHLELIASE-----N-FTSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVD 73 (416)
T ss_pred hhhHhhhC-HHHHHHHHHHHHH-----HhcCeeecccc-----c-CCCHHHHHHhcchhhcCCCCCCCCCcccCCChHHH
Confidence 44454443 4566655422221 24456554433 2 24789999998885321111111 123466
Q ss_pred HHHH----HHHHHHhhcCCCCCCCCCE-EEecCHHHHHHHHHHHhcCCCCEEEecCCCccc-hHHHHhh--CCCeE--EE
Q 014603 91 PARR----AIADYLNRDLPYKLSPDDV-YLTLGCTQAIEVILTVLARPGANILLPRPGFPY-YEARATH--SHLEV--RH 160 (422)
Q Consensus 91 ~lr~----~ia~~l~~~~~~~~~~~~i-~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~-~~~~~~~--~g~~~--~~ 160 (422)
++++ .++++++ .+.. ++++||+.|+..++.+++++||+|+++..+|.+ +...++. .+... ..
T Consensus 74 ~lE~~~~~~la~l~g--------~~~alv~~~SG~~A~~~~l~al~~~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~ 145 (416)
T PRK13034 74 EVEALAIERAKQLFG--------CDYANVQPHSGSQANGAVYLALLKPGDTILGMSLSHGGHLTHGAKVSLSGKWYNAVQ 145 (416)
T ss_pred HHHHHHHHHHHHHhC--------CCceEEecCCcHHHHHHHHHHhcCCCCEEEEcCccceeeeecCCcceeccceeeeEE
Confidence 7787 7888773 2345 556899999999999999999999999999976 2222222 12111 23
Q ss_pred eeccCCCCcccCHHHHHHhhcC-CceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccC-CCCCCCc
Q 014603 161 FDLLPAKGWEVDLDAVEALADE-NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFG-NTPFVPM 238 (422)
Q Consensus 161 ~~~~~~~~~~~d~~~l~~~~~~-~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~-~~~~~~~ 238 (422)
+++++ ..+.+|++++++.++. +++++++.++. +|.. .++.+|.++|+++|+++|+|++|+...+. |...
T Consensus 146 ~~~~~-~~~~~d~~~le~~l~~~~~klVi~~~~~--~g~~---~dl~~l~~la~~~g~~livD~Aha~G~~~~g~~~--- 216 (416)
T PRK13034 146 YGVDR-LTGLIDYDEVEELAKEHKPKLIIAGFSA--YPRE---LDFARFREIADEVGALLMVDMAHIAGLVAAGEHP--- 216 (416)
T ss_pred ccccc-ccCCcCHHHHHHHHhhcCCeEEEECCCc--cccc---cCHHHHHHHHHHcCCEEEEeCcccccCcccCCCC---
Confidence 33332 2456899999988743 56777665554 4555 47888888999999999999999864442 2211
Q ss_pred cccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhhhc--cCcchHHHHHHHHHHhhchHHHHH
Q 014603 239 GVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNIS--SDPATFIQGAVPQILEKTEEEFFS 316 (422)
Q Consensus 239 ~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~ 316 (422)
..+. .-.++++|++|+++++. .|++++++ +++..+++...... ..+.+...+++..++....+....
T Consensus 217 ~~~~--~~Di~~~s~~K~l~g~~--GG~v~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~ 285 (416)
T PRK13034 217 NPFP--HAHVVTTTTHKTLRGPR--GGMILTND-------EEIAKKINSAVFPGLQGGPLMHVIAAKAVAFGEALQPEFK 285 (416)
T ss_pred CCCC--CceEEEEeCcccCCCCC--CeEEEECc-------HHHHHHHHhhcCCcccCCccHHHHHHHHHHHHHHhChhHH
Confidence 1111 12388899999974332 37777753 34445444432211 123333333333333322112234
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCCCCC-CCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecC------CCCCC
Q 014603 317 KITDILRETADICCDRLKEIPCITCPKKP-EGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPG------ITVGL 389 (422)
Q Consensus 317 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g------~~~~~ 389 (422)
+.++++.++.+++++.|++. |+.+. .+ ......++.+.... .....+...+++.||.+.+. .....
T Consensus 286 ~~~~~l~~~a~~l~~~L~~~-G~~~~-~~~~~t~i~~v~~~~~~-----~~~~~~~~~L~~~GI~v~~~~~p~~~~~p~~ 358 (416)
T PRK13034 286 TYAKQVIANAQALAEVLKER-GYDLV-SGGTDNHLLLVDLRPKG-----LSGKDAEQALERAGITVNKNTVPGDTESPFV 358 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHc-CCEec-cCCCCCcEEEEEcCCCC-----CCHHHHHHHHHhCCcEEeccCCCCCCcCCCC
Confidence 56788999999999999988 77633 22 33455666664321 13334434457789999752 12223
Q ss_pred CCeEEEEec------cChHHHHHHHHHHHHHHHH
Q 014603 390 KDWLRITFA------VEPSALEDGLGRMKAFYDR 417 (422)
Q Consensus 390 ~~~iRis~~------~~~~~l~~~~~~l~~~~~~ 417 (422)
...+|++++ .++++++++++.|++++.+
T Consensus 359 ~~~lR~~~~~~t~~~~~~~di~~l~~~l~~~~~~ 392 (416)
T PRK13034 359 TSGIRIGTPAGTTRGFGEAEFREIANWILDVLDD 392 (416)
T ss_pred CCeeEeCcHHHHhCCCCHHHHHHHHHHHHHHHhc
Confidence 567999975 3579999999999988764
No 252
>PLN02509 cystathionine beta-lyase
Probab=99.91 E-value=3.6e-21 Score=183.04 Aligned_cols=228 Identities=18% Similarity=0.187 Sum_probs=160.0
Q ss_pred CCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchH----HHHhhCCC
Q 014603 81 NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYE----ARATHSHL 156 (422)
Q Consensus 81 ~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~----~~~~~~g~ 156 (422)
..|... +.+ .++.+.+++.+.. ..+..++++|+++++.+++ .++++||+|+++.+.|.++. ......|+
T Consensus 125 ~~Y~r~-gnp-t~~aLE~~lA~le----g~e~ai~~~SG~aAi~~il-~ll~~GD~VI~~~~~y~~t~~ll~~~l~~~G~ 197 (464)
T PLN02509 125 YDYTRS-GNP-TRDALESLLAKLD----KADRAFCFTSGMAALSAVT-HLIKNGEEIVAGDDVYGGSDRLLSQVVPRSGV 197 (464)
T ss_pred CccCCC-CCH-HHHHHHHHHHHHh----CCCEEEEeCcHHHHHHHHH-HHhCCCCEEEEcCCchhhHHHHHHHHHHHCCe
Confidence 356654 433 4555555554432 3456777788899987666 56899999999999998875 33456788
Q ss_pred eEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCC
Q 014603 157 EVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFV 236 (422)
Q Consensus 157 ~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~ 236 (422)
+++.++. .|++.+++.++++++++++++|+||+|.+ .++++|+++|+++|+++|+|++|..... + .
T Consensus 198 ~v~~vd~-------~d~e~l~~ai~~~TklV~lesPsNPtG~i---~Dl~~I~~lAk~~g~~lIVD~A~a~~~~-~---~ 263 (464)
T PLN02509 198 VVKRVNT-------TNLDEVAAAIGPQTKLVWLESPTNPRQQI---SDIRKIAEMAHAQGALVLVDNSIMSPVL-S---R 263 (464)
T ss_pred EEEEeCC-------CCHHHHHHhCCcCCeEEEEECCCCCCCCH---HHHHHHHHHHHHcCCEEEEECCcccccc-C---C
Confidence 8776642 36889999998899999999999999997 7899999999999999999999865322 1 1
Q ss_pred CccccCCCCCeEEEecCccccCCCC-ceeEEEEeeCCCCcccchhHHHHHHhhhhh-ccCcchHHHHHHHHHHhhchHHH
Q 014603 237 PMGVFGSIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQGAVPQILEKTEEEF 314 (422)
Q Consensus 237 ~~~~~~~~~~~i~i~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~ 314 (422)
++ .++.| +++.|++|.++++| .-.|++++.+ +.+..++...... ....++...+.+...|+.
T Consensus 264 pl-~~gaD---ivv~S~tK~l~G~gdv~gG~v~~~~-------~~l~~~~~~~~~~~g~~l~p~~A~l~lr~L~t----- 327 (464)
T PLN02509 264 PL-ELGAD---IVMHSATKFIAGHSDVMAGVLAVKG-------EKLAKEVYFLQNSEGSGLAPFDCWLCLRGIKT----- 327 (464)
T ss_pred hh-hcCCc---EEEecCcccccCCCccceeEEEecc-------HHHHHHHHHHHHhcCCCcCHHHHHHHHhhhhh-----
Confidence 22 22333 88999999987644 3357676643 2344444333322 223455665655555554
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 014603 315 FSKITDILRETADICCDRLKEIPCITCPKKP 345 (422)
Q Consensus 315 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 345 (422)
+..+.++..++++.+.+.|+++|.+.-+.+|
T Consensus 328 L~~R~~r~~~nA~~la~~L~~~p~V~~V~yP 358 (464)
T PLN02509 328 MALRIEKQQENARKIAMYLSSHPRVKKVYYA 358 (464)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCccEEECC
Confidence 6778888899999999999998877544444
No 253
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.91 E-value=3.1e-21 Score=183.31 Aligned_cols=293 Identities=15% Similarity=0.123 Sum_probs=193.7
Q ss_pred CCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHH----hhCCCeEEEee
Q 014603 87 VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARA----THSHLEVRHFD 162 (422)
Q Consensus 87 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~----~~~g~~~~~~~ 162 (422)
+...++++.+|++.+ .+..++++||++|+++++.+++++||+|+++...|.+..... ...|++++.++
T Consensus 64 p~~~~le~~lA~l~g--------~~~av~~sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd 135 (433)
T PRK08134 64 PTVAVLEERVAALEG--------GVGAIATASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLHYTLRRFGIETTFVK 135 (433)
T ss_pred hHHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEEC
Confidence 346889999999883 235788999999999999998999999999999997654433 44788888776
Q ss_pred ccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccC
Q 014603 163 LLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG 242 (422)
Q Consensus 163 ~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~ 242 (422)
.+ |++.+++.+++++++|++.+|+||+|.+. ++++|+++|+++|+++|+|.++.. +....++ .++
T Consensus 136 ~~-------d~~~l~~~i~~~TklV~~e~~~np~g~v~---Di~~I~~la~~~gi~livD~t~a~----~~~~~pl-~~G 200 (433)
T PRK08134 136 PG-------DIDGWRAAIRPNTRLLFGETLGNPGLEVL---DIPTVAAIAHEAGVPLLVDSTFTT----PYLLRPF-EHG 200 (433)
T ss_pred CC-------CHHHHHHhcCCCCeEEEEECCCcccCccc---CHHHHHHHHHHcCCEEEEECCCcc----cccCCch-hcC
Confidence 42 78999999999999999999999999995 688889999999999999999865 2222233 344
Q ss_pred CCCCeEEEecCccccCCCCceeEEEEeeCCCCcccch-------------------------hHHHHHH--hhhhhccCc
Q 014603 243 SIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDS-------------------------GIVDSIK--SFLNISSDP 295 (422)
Q Consensus 243 ~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~-------------------------~~~~~~~--~~~~~~~~~ 295 (422)
.| +++.|.+|.++++|-.+|.+++......+... .+..+.+ .........
T Consensus 201 aD---~vv~S~tK~l~g~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~~l 277 (433)
T PRK08134 201 AD---LVYHSATKFLGGHGTAIGGVLVDGGRFDWEASGKFPELTEPYAGFHGMVFAEESTVAAFLLRARREGLRDFGACL 277 (433)
T ss_pred CC---EEEeccccccCCCCCceEEEEEecCccccccccccccccCCcccccccchhhccchhHHHHHHHHHHHHhcCCCC
Confidence 44 89999999998888777777653221110000 0000111 111122244
Q ss_pred chHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC-----------------CceEEEEecCcc
Q 014603 296 ATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPE-----------------GSMFVMVKLNYS 358 (422)
Q Consensus 296 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-----------------~g~~~~~~~~~~ 358 (422)
++...+.+..-|+. +..+.++..++...+.+.|+++|.+.-+.+|. .|..+.+.++.
T Consensus 278 s~~~A~l~~~gL~t-----l~~R~~~~~~nA~~la~~L~~~p~V~~V~yP~l~~~p~~~~~~~~~~~g~gg~~s~~l~~- 351 (433)
T PRK08134 278 SPMNAWQLLQGIET-----LPLRMERHVANTRKVVAFLASHPAVARVAHPELESHPDHALAKRLLPRGAGSVFSFDLKG- 351 (433)
T ss_pred CHHHHHHHhcCCCc-----HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEEecC-
Confidence 55555555444544 67777888888889999999887654332321 23344455532
Q ss_pred cccCCCCHHHHHHHHHHhcCeEE---ecCCCC----------------------CC-CCeEEEEeccChHHHHHHHHHHH
Q 014603 359 LLEGINSDMEFALKLAKEESVIV---LPGITV----------------------GL-KDWLRITFAVEPSALEDGLGRMK 412 (422)
Q Consensus 359 ~~~~~~~~~~~~~~l~~~~gi~v---~~g~~~----------------------~~-~~~iRis~~~~~~~l~~~~~~l~ 412 (422)
..+.+.++++.-.+.. .-|... +. ++.||+|++. |+.+.+++.|.
T Consensus 352 -------~~~~~~~f~~~l~l~~~~~slG~~~sL~~~p~~~~h~~~~~~~~~~~Gi~~~liRlsvGl--E~~~dli~dl~ 422 (433)
T PRK08134 352 -------GRAAGRKFIESLKLFSHLANVGDARSLVIHPASTTHFRMDAAALAAAGIGEGTIRLSIGL--EDADDLIDDLK 422 (433)
T ss_pred -------CHHHHHHHHHhCCcceeccccCCCCceeeCCCccCcccCCHHHHHhcCCCCCeEEEEecc--CCHHHHHHHHH
Confidence 1122233333333322 111111 11 4679999997 45777778888
Q ss_pred HHHHHhcc
Q 014603 413 AFYDRHAK 420 (422)
Q Consensus 413 ~~~~~~~~ 420 (422)
+++++.++
T Consensus 423 ~Al~~~~~ 430 (433)
T PRK08134 423 RALKAAEK 430 (433)
T ss_pred HHHHhhhh
Confidence 88876544
No 254
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.91 E-value=2.6e-21 Score=183.84 Aligned_cols=342 Identities=14% Similarity=0.115 Sum_probs=211.1
Q ss_pred cCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCC-CCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHH
Q 014603 42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARF-NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT 120 (422)
Q Consensus 42 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~-~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~ 120 (422)
.+|+.++||..|...... -..+|.|.+++.+++.+... ..|.. .+.+..+++.|.+..+ ...+.++|+++|+
T Consensus 72 ~dG~~ylD~~~g~~~~~l-Gh~hp~v~~Av~~ql~~l~~~~~~~~----~~~~~~lAe~L~~~~p--~~~~~v~f~~SGs 144 (442)
T TIGR03372 72 TQGNEFIDCLGGFGIFNV-GHRNPNVIAAVENQLAKQPLHSQELL----DPLRALLAKTLAALTP--GKLKYSFFCNSGT 144 (442)
T ss_pred CCCCEEEECCccHHhhhc-CCCCHHHHHHHHHHHHhCCCcccccC----CHHHHHHHHHHHHhCC--CCcCEEEEeCCch
Confidence 458889999888433222 24678999999999876321 11222 2344445555544322 2236799999999
Q ss_pred HHHHHHHHHhcC----CC-CEEEecCCCccchHHHHhhCCCeEE----EeeccCCCC--cccCHHHHHHhhc-----CCc
Q 014603 121 QAIEVILTVLAR----PG-ANILLPRPGFPYYEARATHSHLEVR----HFDLLPAKG--WEVDLDAVEALAD-----ENT 184 (422)
Q Consensus 121 ~a~~~~~~~l~~----~g-d~Vl~~~~~~~~~~~~~~~~g~~~~----~~~~~~~~~--~~~d~~~l~~~~~-----~~~ 184 (422)
+|++.+++.... .| .+|+....+||+....+........ ..|..+.-. --.|.+.+++.++ .+.
T Consensus 145 EA~e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~~d~~~~~~~l~~~~~~~~~ 224 (442)
T TIGR03372 145 ESVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFGDIEAMLKALNECKKTGDD 224 (442)
T ss_pred HHHHHHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCCCCHHHHHHHHHHHhcCCCc
Confidence 999999886432 23 6899999999987654443321110 111111000 0025566666553 234
Q ss_pred eEEEEeCC-CCCcccc-cCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCC-
Q 014603 185 VALVIINP-GNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPG- 261 (422)
Q Consensus 185 ~~i~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G- 261 (422)
.+.++..| ....|.. +|++.++++.++|++||+++|+||++.++..+|.. ..+..++..++++ +++|.+ ..|
T Consensus 225 vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~-~a~e~~gv~PDiv---t~gK~l-g~G~ 299 (442)
T TIGR03372 225 VAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTGKM-FACEHEGVQPDIL---CLAKAL-GGGV 299 (442)
T ss_pred EEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCccccc-hhhhhcCCCCCee---eehhhh-cCCc
Confidence 56666777 5556664 57888999999999999999999999888777753 2333334333333 368996 567
Q ss_pred ceeEEEEeeCCCCcccchhHHHHHHhh---hhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhh----
Q 014603 262 WRLGWLVTSDPNGILQDSGIVDSIKSF---LNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLK---- 334 (422)
Q Consensus 262 ~r~G~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~---- 334 (422)
+++|.++++ +++.+.+... ...+.+.++++.+++.+.|+...++. ..++.++.-+++++.|+
T Consensus 300 ~Pigavv~~--------~~i~~~~~~~~~~~~~T~~gnp~~~Aaa~a~L~~i~~~~---l~~~~~~~G~~l~~~L~~l~~ 368 (442)
T TIGR03372 300 MPIGATIAT--------EAVFSVLFDNPFLHTTTFGGNPLACAAALATINELLEKN---LPAQAAIKGDFLLDGFQQLAA 368 (442)
T ss_pred ccceEEEec--------HHHHHhhhccCccccCCCCCCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHH
Confidence 689999885 4676666321 12344668899999999998654322 22333344444444443
Q ss_pred cCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHHHH
Q 014603 335 EIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGRMK 412 (422)
Q Consensus 335 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~l~ 412 (422)
++|... ......|.++.+.+.... ....+...+ .++||++.+... ..+.+|+.++ ++++++++++++++
T Consensus 369 ~~~~~i-~~vRG~Gl~~giel~~~~-----~~~~i~~~l-~~~Gvl~~~~~~--~~~~lr~~Ppl~~t~~~id~~~~~l~ 439 (442)
T TIGR03372 369 EYPDLI-IEARGKGLLMAIEFRDNE-----IGYAFAKEL-FQQNILVAGTLN--NAKSIRIEPPLTITIEQCALVIKAAK 439 (442)
T ss_pred hCCCce-EEEecceEEEEEEeCChH-----HHHHHHHHH-HHCCcEEeecCC--CCCEEEEECCcccCHHHHHHHHHHHH
Confidence 344211 112344777777775320 133455554 567999975321 1478999987 79999999999998
Q ss_pred HHH
Q 014603 413 AFY 415 (422)
Q Consensus 413 ~~~ 415 (422)
+++
T Consensus 440 ~~~ 442 (442)
T TIGR03372 440 DAL 442 (442)
T ss_pred HhC
Confidence 764
No 255
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.91 E-value=5.4e-21 Score=173.87 Aligned_cols=347 Identities=16% Similarity=0.136 Sum_probs=229.3
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 122 (422)
+|+.+|||..++.....+ +.+|.|.+|+.+++.++. .|+.+ .+++-.+|+.+.+..+ ..+.|-|+++||+|
T Consensus 51 DGn~YIDy~~~~Gp~ilG-H~~p~V~~Av~~~l~~G~--~fg~P---te~Ei~~Aell~~~~p---~~e~vrfvnSGTEA 121 (432)
T COG0001 51 DGNEYIDYVLGWGPLILG-HAHPAVVEAVQEQLERGL--SFGAP---TELEVELAELLIERVP---SIEKVRFVNSGTEA 121 (432)
T ss_pred CCCEeeehhccCcccccC-CCCHHHHHHHHHHHHhcC--CCCCC---CHHHHHHHHHHHHhcC---cccEEEEecchhHH
Confidence 799999999998665444 467889999999998864 46543 2556667777766443 44899999999999
Q ss_pred HHHHHHHh---cCCCCEEEecCCCccchHHHHhh-CCCeEEEe--eccC---C--------CCcccCHHHHHHhhcCC--
Q 014603 123 IEVILTVL---ARPGANILLPRPGFPYYEARATH-SHLEVRHF--DLLP---A--------KGWEVDLDAVEALADEN-- 183 (422)
Q Consensus 123 ~~~~~~~l---~~~gd~Vl~~~~~~~~~~~~~~~-~g~~~~~~--~~~~---~--------~~~~~d~~~l~~~~~~~-- 183 (422)
...+++.. +++ |+|+..+-|||+..+.+.. .|..+-.. |-.+ . -.|+ |++.+++++.+.
T Consensus 122 tmsAiRlARa~TgR-~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~yN-D~~al~~~~~~~g~ 199 (432)
T COG0001 122 TMSAIRLARAYTGR-DKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPYN-DLEALEEAFEEYGD 199 (432)
T ss_pred HHHHHHHHHHhhCC-CeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecCC-CHHHHHHHHHHcCC
Confidence 99988754 443 8999999999987655442 22111100 1000 0 0011 889999988763
Q ss_pred ceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCC
Q 014603 184 TVALVIINP-GNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPG 261 (422)
Q Consensus 184 ~~~i~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G 261 (422)
..+.+|+.| ....|.+ +.++.+++|.++|+++|+++|.||+..++...-........+.+| +.++.|. .+.|
T Consensus 200 ~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gGaq~~~gi~PD-----lttlGKi-IGGG 273 (432)
T COG0001 200 DIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGGAQGYYGVEPD-----LTTLGKI-IGGG 273 (432)
T ss_pred cEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCcccccccCcCcc-----hhhhhhh-hcCC
Confidence 677788888 3336664 556679999999999999999999998766542233344455554 6667899 6899
Q ss_pred ceeEEEEeeCCCCcccchhHHHHHHhhhh----hccCcchHHHHHHHHHHhhchH--HHHHHHHHHHHHHHHHHHHHhhc
Q 014603 262 WRLGWLVTSDPNGILQDSGIVDSIKSFLN----ISSDPATFIQGAVPQILEKTEE--EFFSKITDILRETADICCDRLKE 335 (422)
Q Consensus 262 ~r~G~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~~~l~~~L~~ 335 (422)
+++|.+.++ .++++.+..... .+.+.+++++.|..+.|+...+ ..++++.+.-.++++-+.+.+++
T Consensus 274 lP~ga~gGr--------~eiM~~~~p~g~vyqaGT~sgnplamaAG~atl~~l~~~~~~y~~l~~~~~~L~~gl~~~~~~ 345 (432)
T COG0001 274 LPIGAFGGR--------AEIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLEELMTEEGVYERLDALGERLAEGLRAAAER 345 (432)
T ss_pred cceeeeccH--------HHHHhhhCCCCCccccCCCCCcHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999886 578887765442 3457788999999998886432 23455545555555555555555
Q ss_pred CCCCCCCCCCCCceEEEEecCccc--c-----cCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEeccChHHHHHHH
Q 014603 336 IPCITCPKKPEGSMFVMVKLNYSL--L-----EGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALEDGL 408 (422)
Q Consensus 336 ~~~~~~~~~~~~g~~~~~~~~~~~--~-----~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~l~~~~ 408 (422)
. ++.+.....+++|-+.-.+... + .....-..++..+ .++||++.|+.+ ...=+|..+++++|++.+
T Consensus 346 ~-g~~~~v~~~gsm~~i~F~~~~~~n~~da~~sd~~~~~~~~~~~-l~~GV~l~ps~~----ea~flS~ahte~di~~~~ 419 (432)
T COG0001 346 H-GIPLTVNRVGSMFGIFFTEEGVRNYADAKRSDVERFAKFFHHL-LNRGVYLAPSQF----EAGFLSTAHTEEDIDRTL 419 (432)
T ss_pred h-CCCeEEeeecceEEEEecCCCCCCHHHHHhhchHHHHHHHHHH-HhCCcccCCccc----cceeeecccCHHHHHHHH
Confidence 5 5543323344444332222110 0 0000123344544 456999999752 234577779999999999
Q ss_pred HHHHHHHHHhcc
Q 014603 409 GRMKAFYDRHAK 420 (422)
Q Consensus 409 ~~l~~~~~~~~~ 420 (422)
+++++++++...
T Consensus 420 ~a~~~~~~~~~~ 431 (432)
T COG0001 420 EAADEAFKELAG 431 (432)
T ss_pred HHHHHHHHHhhc
Confidence 999999987653
No 256
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.91 E-value=5.8e-21 Score=178.17 Aligned_cols=270 Identities=16% Similarity=0.099 Sum_probs=182.0
Q ss_pred CEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHH----HHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEE
Q 014603 112 DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEA----RATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVAL 187 (422)
Q Consensus 112 ~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i 187 (422)
..+++++|++|++.++.+++++||+|+++.|.|.++.. .++..|+++..++.. +.+.+++.++++++++
T Consensus 81 ~~v~~sSG~aAi~~~l~all~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd~~-------~~e~l~~al~~~TklV 153 (395)
T PRK05967 81 GTILVPSGLAAVTVPFLGFLSPGDHALIVDSVYYPTRHFCDTMLKRLGVEVEYYDPE-------IGAGIAKLMRPNTKVV 153 (395)
T ss_pred CEEEECcHHHHHHHHHHHhcCCCCEEEEccCCcHHHHHHHHHHHHhcCeEEEEeCCC-------CHHHHHHhcCcCceEE
Confidence 44666668999999999999999999999999988764 456778888776421 3477999999899999
Q ss_pred EEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCC-CCceeEE
Q 014603 188 VIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIV-PGWRLGW 266 (422)
Q Consensus 188 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~-~G~r~G~ 266 (422)
++++|+||++.+ .++++|+++|+++|+++|+|++|....+ ..+ ..++.| +++.|.+|.+++ .+.-.|+
T Consensus 154 ~lesPsNP~l~v---~dl~~I~~la~~~g~~vvVD~t~a~p~~----~~p-l~~GaD---ivv~S~tKy~~Gh~d~~~G~ 222 (395)
T PRK05967 154 HTEAPGSNTFEM---QDIPAIAEAAHRHGAIVMMDNTWATPLY----FRP-LDFGVD---ISIHAATKYPSGHSDILLGT 222 (395)
T ss_pred EEECCCCCCCcH---HHHHHHHHHHHHhCCEEEEECCccCcee----cCh-hHcCCC---EEEEecccccCCCCCeeEEE
Confidence 999999998766 8999999999999999999999975221 112 234444 999999999755 4466776
Q ss_pred EEeeCCCCcccchhHHHHHHhhhh-hccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 014603 267 LVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKP 345 (422)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 345 (422)
++.+ ++..+++..... .....++...+.+..-|+. +.-+.++..++...+.+.|+++|.+.-+.+|
T Consensus 223 v~~~--------~~~~~~l~~~~~~~G~~~~p~da~l~~rgl~T-----l~lR~~~~~~na~~lA~~L~~hp~v~~V~yP 289 (395)
T PRK05967 223 VSAN--------EKCWPQLLEAHGTLGLCAGPDDTYQILRGLRT-----MGIRLEHHRKSALEIARWLEGRPDVARVLHP 289 (395)
T ss_pred EEcC--------HHHHHHHHHHHHHcCCCCCHHHHHHHHcCccc-----HHHHHHHHHHHHHHHHHHHHhCCCCcEEECC
Confidence 6653 344555543332 2335566666666555554 6667778888889999999998877534444
Q ss_pred C----------------CceEEEEecCcccccCCCCHHHHHHHHHHhcCeE-Eec--CCCC----------------CC-
Q 014603 346 E----------------GSMFVMVKLNYSLLEGINSDMEFALKLAKEESVI-VLP--GITV----------------GL- 389 (422)
Q Consensus 346 ~----------------~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~-v~~--g~~~----------------~~- 389 (422)
. .|-.+.+.++.... +..+.+.+++++-.+. ..+ |... +.
T Consensus 290 gl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~----~~~~~~~~f~~~l~l~~~~~slG~~~sLi~~~~~~~~~~~~~~~~ 365 (395)
T PRK05967 290 ALPSFPGHEIWKRDFSGASGIFSFVLAAGPE----KGKAKAHAFLDALEIFGLGYSWGGYESLALHVKLGDRTVAKAPYA 365 (395)
T ss_pred CCCCCccHHHHHHhCCCCceEEEEEEcCCCc----ccHHHHHHHHHhCCcceEccCCCCcceeeeeCCCChhHhhhccCC
Confidence 2 23345556642100 0123333443433332 111 1110 01
Q ss_pred CCeEEEEeccChHHHHHHHHHHHHHHHHh
Q 014603 390 KDWLRITFAVEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 390 ~~~iRis~~~~~~~l~~~~~~l~~~~~~~ 418 (422)
++.||+|++.+ +.+.+++.|.++++..
T Consensus 366 ~~liRlSvGlE--d~~dLi~Dl~~Al~~~ 392 (395)
T PRK05967 366 GPVIRLQIGLE--DVPDLKADLERGFAAA 392 (395)
T ss_pred CCeEEEEeccC--CHHHHHHHHHHHHHhh
Confidence 35799999973 5666777777777643
No 257
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.90 E-value=3.4e-21 Score=180.79 Aligned_cols=220 Identities=17% Similarity=0.167 Sum_probs=156.8
Q ss_pred CCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHH----HHhhCCCeEEEee
Q 014603 87 VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEA----RATHSHLEVRHFD 162 (422)
Q Consensus 87 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~----~~~~~g~~~~~~~ 162 (422)
+...+|++.++++.+ . +..+++++|++++..++ .++++||+|+++.|.|.+... .+...|++++.++
T Consensus 50 p~~~~Le~~lA~l~g------~--~~~~~~~sG~aai~~~~-~~l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v~ 120 (377)
T PRK07671 50 PTRAALEELIAVLEG------G--HAGFAFGSGMAAITAVM-MLFSSGDHVILTDDVYGGTYRVMTKVLNRFGIEHTFVD 120 (377)
T ss_pred hHHHHHHHHHHHHhC------C--CceEEeCCHHHHHHHHH-HHhCCCCEEEECCCccchHHHHHHHHHhcCCeEEEEEC
Confidence 346789999999873 2 23455666778888765 567899999999999984432 3345688877765
Q ss_pred ccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccC
Q 014603 163 LLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG 242 (422)
Q Consensus 163 ~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~ 242 (422)
. .|++.+++.++++++++++++|+||+|.+ .++++|.++|+++|+++|+|++|....+. . ++ .++
T Consensus 121 ~-------~d~~~l~~ai~~~tklV~le~P~NPtg~~---~dl~~I~~la~~~g~~lvvD~a~~~~~~~-~---p~-~~g 185 (377)
T PRK07671 121 T-------SNLEEVEEAIRPNTKAIYVETPTNPLLKI---TDIKKISTIAKEKGLLTIVDNTFMTPYWQ-S---PI-SLG 185 (377)
T ss_pred C-------CCHHHHHHhcCCCCeEEEEECCCCCCCcc---cCHHHHHHHHHHcCCEEEEECCCCccccC-C---hh-hhC
Confidence 2 37899999998899999999999999998 56888888999999999999998753221 1 12 223
Q ss_pred CCCCeEEEecCccccCCCC-ceeEEEEeeCCCCcccchhHHHHHHhhhhhc-cCcchHHHHHHHHHHhhchHHHHHHHHH
Q 014603 243 SIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKSFLNIS-SDPATFIQGAVPQILEKTEEEFFSKITD 320 (422)
Q Consensus 243 ~~~~~i~i~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 320 (422)
. .+++.|++|.+++++ .-.|++++++ +++.+++...+... ...++...+.+..-++. +..+.+
T Consensus 186 ~---Divv~S~sK~l~G~~~~~~G~~v~~~-------~~l~~~~~~~~~~~g~~~~~~~a~l~~~~l~t-----l~~R~~ 250 (377)
T PRK07671 186 A---DIVLHSATKYLGGHSDVVAGLVVVNS-------PELAEDLHFVQNSTGGILGPQDSWLLLRGLKT-----LGIRME 250 (377)
T ss_pred C---eEEEecCcccccCCccceeEEEEeCc-------HHHHHHHHHHHHhhcCCCCHHHHHHHHcCcCh-----HHHHHH
Confidence 3 389999999987654 3456666643 45777776655432 34455555554444433 556777
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCC
Q 014603 321 ILRETADICCDRLKEIPCITCPKKP 345 (422)
Q Consensus 321 ~~~~~~~~l~~~L~~~~~~~~~~~~ 345 (422)
+..++...+.+.|++.|.+..+.+|
T Consensus 251 ~~~~na~~la~~L~~~~~v~~v~~p 275 (377)
T PRK07671 251 EHETNSRAIAEFLNNHPAVNKVYYP 275 (377)
T ss_pred HHHHHHHHHHHHHHcCCCeeEEECC
Confidence 8889999999999988776434343
No 258
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.90 E-value=9e-21 Score=178.82 Aligned_cols=311 Identities=17% Similarity=0.229 Sum_probs=195.3
Q ss_pred HHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHh-cCCCCEEEecCCC
Q 014603 65 SVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVL-ARPGANILLPRPG 143 (422)
Q Consensus 65 ~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l-~~~gd~Vl~~~~~ 143 (422)
++-.+++.+.+..+. .|+......++++.+++++ +.+++++++|+++|+.+++.++ +++||+|+++.++
T Consensus 11 ~~~~~~~~~~l~~~~--~~g~~~~~~~~e~~la~~~--------g~~~~v~~~sgt~al~~~l~~~~~~~Gd~Viv~~~t 80 (375)
T PRK11706 11 GTELDYIQQAMSSGK--LCGDGGFTRRCQQWLEQRF--------GSAKVLLTPSCTAALEMAALLLDIQPGDEVIMPSYT 80 (375)
T ss_pred HHHHHHHHHHHHcCC--ccCCCHHHHHHHHHHHHHh--------CCCeEEEECCHHHHHHHHHHHhCCCCCCEEEECCCC
Confidence 444677777776543 2332222344445555554 3468999999999999987765 6899999999999
Q ss_pred ccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcc
Q 014603 144 FPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADE 223 (422)
Q Consensus 144 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~ 223 (422)
|.++...+...|++++.+++++ +++.+|++++++.++++++++++++ ++|.. .++++|.++|+++|++||+|+
T Consensus 81 ~~~~~~~~~~~G~~~v~~d~d~-~~~~~d~~~le~~i~~~tk~i~~~~---~~G~~---~~~~~i~~la~~~~i~vIeD~ 153 (375)
T PRK11706 81 FVSTANAFVLRGAKIVFVDIRP-DTMNIDETLIEAAITPKTRAIVPVH---YAGVA---CEMDTIMALAKKHNLFVVEDA 153 (375)
T ss_pred cHHHHHHHHHcCCEEEEEecCC-CcCCcCHHHHHHhcCCCCeEEEEeC---CCCCc---cCHHHHHHHHHHcCCEEEEEC
Confidence 9999999999999999999865 3467899999999988899888764 68877 467889999999999999999
Q ss_pred cccccc-cCCCCCCCccccCCCCCeEEEecCc--cccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhhhc--------
Q 014603 224 VYDHLA-FGNTPFVPMGVFGSIVPVLTLGSIS--KRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNIS-------- 292 (422)
Q Consensus 224 ~~~~~~-~~~~~~~~~~~~~~~~~~i~i~s~s--K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 292 (422)
+|+.+. +.+. ++..++ .+.+.||+ |.+ .+|.+.+++..+ +++.++++......
T Consensus 154 a~a~g~~~~~~---~~g~~~----~~~~~Sf~~~K~l-~~g~gG~~~~~~--------~~~~~~~~~~~~~g~~~~~~~~ 217 (375)
T PRK11706 154 AQGVMSTYKGR---ALGTIG----HIGCFSFHETKNY-TAGEGGALLIND--------PALIERAEIIREKGTNRSQFFR 217 (375)
T ss_pred ccccccccCCe---eeecCc----CEEEEeCCCCccc-cccCCeEEEECC--------HHHHHHHHHHHHcCCCcchhhc
Confidence 998765 3332 122222 14455655 996 446665555532 45666555443210
Q ss_pred ----------cCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCC---CCCCCCCCC----ceEEEEec
Q 014603 293 ----------SDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPC---ITCPKKPEG----SMFVMVKL 355 (422)
Q Consensus 293 ----------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~---~~~~~~~~~----g~~~~~~~ 355 (422)
.+.+........+++. ..-..+++..++-+++.+.+.+.|++++. +.....+.+ ..++++.+
T Consensus 218 ~~~~~~~~~~~g~~~~~~~~~aa~~~-~ql~~l~~~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (375)
T PRK11706 218 GQVDKYTWVDIGSSYLPSELQAAYLW-AQLEAADRINQRRLALWQRYYDALAPLAEAGRIELPSIPDDCKHNAHMFYIKL 296 (375)
T ss_pred cCCCcceeeecccccCcCHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCeeecCCCCCCCceeeEEEEEEE
Confidence 0111111111111111 11133566666677777788888887652 331212221 23455656
Q ss_pred CcccccCCCCHHHHHHHHHHhcCeEEecCCCC----------C-----C-------CCeEEEEec--cChHHHHHHHHHH
Q 014603 356 NYSLLEGINSDMEFALKLAKEESVIVLPGITV----------G-----L-------KDWLRITFA--VEPSALEDGLGRM 411 (422)
Q Consensus 356 ~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~----------~-----~-------~~~iRis~~--~~~~~l~~~~~~l 411 (422)
+.. .+..++...| .++||.+...... + . ...+-+-+. .++++++..++.|
T Consensus 297 ~~~-----~~r~~l~~~L-~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~~~~~i~~~i 370 (375)
T PRK11706 297 RDL-----EDRSALINFL-KEAGIMAVFHYIPLHSSPAGERFGRFHGEDRYTTKESERLLRLPLFYNLTDVEQRTVIDTI 370 (375)
T ss_pred CCc-----CCHHHHHHHH-HHCCCCccccCCccCcchhhHhcCCCCCCChHHHHHHhCcEeccCCCCCCHHHHHHHHHHH
Confidence 432 1345665655 6679987532100 0 0 233444333 5789999999998
Q ss_pred HHHH
Q 014603 412 KAFY 415 (422)
Q Consensus 412 ~~~~ 415 (422)
++++
T Consensus 371 ~~~~ 374 (375)
T PRK11706 371 LEFF 374 (375)
T ss_pred HHHh
Confidence 8764
No 259
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.90 E-value=4.2e-21 Score=178.15 Aligned_cols=313 Identities=14% Similarity=0.092 Sum_probs=213.9
Q ss_pred CCcHHHHHHHHHHhhCCC---CCCCCCC-------CCCHHHHHHHHHHHhhcCCCCCCCCCEEEecC-HHHHHHHHHHHh
Q 014603 62 RTASVAVDAIVHSVRSAR---FNCYSST-------VGILPARRAIADYLNRDLPYKLSPDDVYLTLG-CTQAIEVILTVL 130 (422)
Q Consensus 62 ~~~~~v~~a~~~~~~~~~---~~~y~~~-------~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g-~~~a~~~~~~~l 130 (422)
..|..|++++.+.+.+.. ...+... .-+.++++.+++++ +.+ +..+|++++| ||.|+++++.++
T Consensus 2 ~~p~~v~~~~~~~~~~~~~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~----~~~-~~~~v~~~~gsgT~a~ea~~~nl 76 (349)
T TIGR01364 2 ALPEEVLEQAQKELLNFNGTGMSVMEISHRSKEFEAVANEAESDLRELL----NIP-DNYEVLFLQGGATGQFAAVPLNL 76 (349)
T ss_pred CCCHHHHHHHHHHHhCccCCCccccccCCCchHHHHHHHHHHHHHHHHh----CCC-CCceEEEEcCCchHHHHHHHHhc
Confidence 356789999998887421 1122221 12344455566655 211 2346777755 999999999999
Q ss_pred cCCCCEEEecCCCccc--hHHHHhhCCCeEEEeeccCCC--CcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHH
Q 014603 131 ARPGANILLPRPGFPY--YEARATHSHLEVRHFDLLPAK--GWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQ 206 (422)
Q Consensus 131 ~~~gd~Vl~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~--~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~ 206 (422)
..+|+++++...+.++ +...++..|. +..+...+.. +..+++++++ ++++++++.+++..+.||+..+
T Consensus 77 ~~~~~~~l~i~~G~fg~r~~~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~th~ETstGv~~~----- 148 (349)
T TIGR01364 77 LAEGKVADYIVTGAWSKKAAKEAKKYGV-VNVVASGKEGNYTKIPDPSTWE--ISEDAAYVHYCANETIHGVEFR----- 148 (349)
T ss_pred CCCCCeEEEEECCHHHHHHHHHHHHhCC-cEEEeccccCCCCCCCCHHhcC--CCCCCCEEEEcCCCCcccEecc-----
Confidence 9899998888777644 4677888888 6666543222 1234555544 3457889999999999999864
Q ss_pred HHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHH
Q 014603 207 KIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIK 286 (422)
Q Consensus 207 ~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~ 286 (422)
++++.+++++++|.+++. |..+.++..++ ++++|.+|.||.+| +|+++.++ +..+++.
T Consensus 149 ---~l~~~~~~l~iVDavss~----g~~~id~~~~d-----~~~~ssqK~lgP~G--lg~l~~s~--------~~~~~~~ 206 (349)
T TIGR01364 149 ---ELPDVKNAPLVADMSSNI----LSRPIDVSKFG-----LIYAGAQKNIGPAG--LTVVIVRK--------DLLGRAS 206 (349)
T ss_pred ---eecccCCCeEEEEccccc----cCccCCHHHcc-----EEEEecccccCCCc--eEEEEECH--------HHHhhcc
Confidence 455578999999999987 44444554432 88899999998777 78888763 3333321
Q ss_pred h-----------h--hhhccCcchHHHHHHHHHHhhchHH-HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC-C--CCce
Q 014603 287 S-----------F--LNISSDPATFIQGAVPQILEKTEEE-FFSKITDILRETADICCDRLKEIPCITCPKK-P--EGSM 349 (422)
Q Consensus 287 ~-----------~--~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~--~~g~ 349 (422)
. . ....++|+....+++.++|+...+. .++.+.++.+++.+++++.|++++++..... + ....
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~ 286 (349)
T TIGR01364 207 RITPSMLNYKIHAENDSMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRM 286 (349)
T ss_pred cCCCCcchHHHHHhcCCCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCe
Confidence 1 0 1123588888899999999876666 6999999999999999999999977642311 2 1223
Q ss_pred EEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHHHHHHHHH
Q 014603 350 FVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGRMKAFYDR 417 (422)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~l~~~~~~ 417 (422)
.+.+.++.. ....++.. .+.++|+.+.+|.. ..+.+|+|+. ++.+||+++++.|++++++
T Consensus 287 v~sf~~~~~-----~~~~~~~~-~~~~~Gi~~~~~~~--~~g~vRvS~~~~nt~edid~l~~al~~~~~~ 348 (349)
T TIGR01364 287 NVVFTLGNE-----ELEKRFLK-EAEERGLVSLKGHR--SVGGMRASIYNAMPLEGVQALVDFMKEFQKK 348 (349)
T ss_pred EEEEecCCh-----hHhHHHHH-HHHHCCCcccCCcc--ccCeeEEECcCCCCHHHHHHHHHHHHHHHHh
Confidence 344455431 01233334 44667998877765 3468999997 7899999999999987654
No 260
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.90 E-value=6.7e-21 Score=182.37 Aligned_cols=347 Identities=15% Similarity=0.161 Sum_probs=218.4
Q ss_pred cCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHH
Q 014603 42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ 121 (422)
Q Consensus 42 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 121 (422)
.+|+.++||..|......+ ..+|+|.+++.+++..... +.. ....+.+..+++.|.+..+ ...+.++|+++|++
T Consensus 79 ~dG~~ylD~~~g~~~~~lG-H~~p~v~~Ai~~ql~~l~~--~~~-~~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGsE 152 (459)
T PRK11522 79 TQGQEFIDCLGGFGIFNVG-HRNPVVVSAVQNQLAKQPL--HSQ-ELLDPLRAMLAKTLAALTP--GKLKYSFFCNSGTE 152 (459)
T ss_pred CCCCEEEECCcCHHhhhcC-CCCHHHHHHHHHHHhhCcc--ccc-ccCCHHHHHHHHHHHHhCC--CCCCEEEEeCCchH
Confidence 3588899998885443222 4678999999999976322 111 1123444455555544322 23468999999999
Q ss_pred HHHHHHHHhc---C-CC-CEEEecCCCccchHHHHhhC-CCeEEE---eeccCC---CCcccCHHHHHHhhcC-----Cc
Q 014603 122 AIEVILTVLA---R-PG-ANILLPRPGFPYYEARATHS-HLEVRH---FDLLPA---KGWEVDLDAVEALADE-----NT 184 (422)
Q Consensus 122 a~~~~~~~l~---~-~g-d~Vl~~~~~~~~~~~~~~~~-g~~~~~---~~~~~~---~~~~~d~~~l~~~~~~-----~~ 184 (422)
|++.+++... . +| ..|+....+||++...+... +..... .+..+. -.+ .|.+.+++.++. +.
T Consensus 153 Ave~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~-~d~~~l~~~l~~~~~~~~~ 231 (459)
T PRK11522 153 SVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPF-GNIEAMRTALSECKKTGDD 231 (459)
T ss_pred HHHHHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCC-CCHHHHHHHHHHhhccCCc
Confidence 9999988642 1 22 47899999999886544432 211111 111110 001 156777776642 34
Q ss_pred eEEEEeCC-CCCcccc-cCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCC-
Q 014603 185 VALVIINP-GNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPG- 261 (422)
Q Consensus 185 ~~i~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G- 261 (422)
.+.++..| +...|.+ +|.+.++++.++|++||+++|+||++.++..+|... ....++..++++ +++|.+ ..|
T Consensus 232 iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~~-a~e~~gv~PDiv---t~gK~l-ggG~ 306 (459)
T PRK11522 232 VAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGKMF-ACEHENVQPDIL---CLAKAL-GGGV 306 (459)
T ss_pred EEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccchhh-hhhccCCCCCEE---Eechhh-hCCC
Confidence 55666777 5556764 577889999999999999999999998877776532 223333333333 568995 456
Q ss_pred ceeEEEEeeCCCCcccchhHHHHHHhh---hhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcC--
Q 014603 262 WRLGWLVTSDPNGILQDSGIVDSIKSF---LNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEI-- 336 (422)
Q Consensus 262 ~r~G~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-- 336 (422)
+++|.++++ +++.+.+... ...+.+.++++.+++.+.|+...++ +..++++++-+++++.|+++
T Consensus 307 ~Pigav~~~--------~~i~~~~~~~~~~~~~T~~gnp~~~Aaala~L~~i~~~---~l~~~~~~~g~~l~~~L~~l~~ 375 (459)
T PRK11522 307 MPIGATIAT--------EEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLEQ---NLPAQAEQKGDYLLDGFRQLAR 375 (459)
T ss_pred ccceeEEEc--------HHHHHHhccCCcccCCCCCCCHHHHHHHHHHHHHHhcc---hHHHHHHHHHHHHHHHHHHHHH
Confidence 689999985 4566655321 1234466889999999988864422 24455555566666666543
Q ss_pred --CCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHHHH
Q 014603 337 --PCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGRMK 412 (422)
Q Consensus 337 --~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~l~ 412 (422)
|.+. ......|.++.+.+... .....+...+ .++||.+.+... ..+.+|++++ ++++++++++++|.
T Consensus 376 ~~~~~i-~~VrG~Gl~~giel~~~-----~~~~~i~~~l-~~~Gvl~~~~~~--~~~~lr~~Ppl~~t~~~id~~l~~l~ 446 (459)
T PRK11522 376 EYPDLV-QEARGKGMLMAIEFVDN-----EIGYNFASEM-FRQRVLVAGTLN--NAKTIRIEPPLTLTIEQCEQVLKAAR 446 (459)
T ss_pred hCCCce-eeEEeceeEEEEEecCc-----hHHHHHHHHH-HHCCeEEEecCC--CCCEEEEECCccCCHHHHHHHHHHHH
Confidence 3211 11223467777777532 0133454544 557999976421 2478999987 78999999999999
Q ss_pred HHHHHhcc
Q 014603 413 AFYDRHAK 420 (422)
Q Consensus 413 ~~~~~~~~ 420 (422)
+++++..+
T Consensus 447 ~~l~~~~~ 454 (459)
T PRK11522 447 KALAAMRV 454 (459)
T ss_pred HHHHHHHH
Confidence 99987653
No 261
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.90 E-value=3.1e-20 Score=177.62 Aligned_cols=349 Identities=18% Similarity=0.157 Sum_probs=213.4
Q ss_pred cCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHH
Q 014603 42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ 121 (422)
Q Consensus 42 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 121 (422)
.+|+.++||..|......+ ..+|++.+++.+++..... +.......+....+|+.|....+ .-..+.++|+++|++
T Consensus 51 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~Ai~~ql~~~~~--~~~~~~~~~~~~~lAe~L~~~~p-~~~~~~v~f~~SGsE 126 (441)
T PRK05769 51 VDGNVYLDFNAGIAVTNVG-HAHPKVVKAVKEQAEKFLH--YSLTDFYYEPAVELAERLVEIAP-GGFEKKVFFTNSGTE 126 (441)
T ss_pred CCCCEEEECCCchhhcccC-CCCHHHHHHHHHHHHhccC--ccCcccCCHHHHHHHHHHHHhCC-CCCCCEEEECCchHH
Confidence 3688899999887553333 4578999999999976321 11111123445556666654322 112368999999999
Q ss_pred HHHHHHHHhc--CCCCEEEecCCCccchHHHHhhC-CC-------------eEEEeeccCC--CCcc---------cCHH
Q 014603 122 AIEVILTVLA--RPGANILLPRPGFPYYEARATHS-HL-------------EVRHFDLLPA--KGWE---------VDLD 174 (422)
Q Consensus 122 a~~~~~~~l~--~~gd~Vl~~~~~~~~~~~~~~~~-g~-------------~~~~~~~~~~--~~~~---------~d~~ 174 (422)
|++.+++... ...++|+....+||++...+... +. ++..++.... ..+. .+.+
T Consensus 127 A~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (441)
T PRK05769 127 SNEAAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLD 206 (441)
T ss_pred HHHHHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccccccccCCchHHHHHHHHH
Confidence 9999987542 12368999999999876544322 11 1122221100 0000 0123
Q ss_pred HHHH-hhc----CCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCe
Q 014603 175 AVEA-LAD----ENTVALVIINP-GNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPV 247 (422)
Q Consensus 175 ~l~~-~~~----~~~~~i~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (422)
.+++ .++ .+..+.++..| ....|.. .+.+.+++|.++|++||+++|+||++.++.++|... ....++..+++
T Consensus 207 ~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~G~~~-a~~~~gv~pDi 285 (441)
T PRK05769 207 FIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRTGKMF-AIEHFGVEPDI 285 (441)
T ss_pred HHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccccee-hhhccCCCCCE
Confidence 3555 222 34566677777 4556664 567889999999999999999999999877766432 22233333333
Q ss_pred EEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHH
Q 014603 248 LTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETAD 327 (422)
Q Consensus 248 i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~ 327 (422)
+ +++|.++ .|+++|++++++ ++...+......+.+.++++++++.++|+...+ +..++++++.+
T Consensus 286 v---t~~K~l~-~G~p~gav~~~~--------~i~~~~~~~~~~T~~g~p~~~aaa~a~L~~l~~----~~~~~~~~~g~ 349 (441)
T PRK05769 286 I---TLAKAIA-GGLPLGAVIGRA--------ELMFLPPGSHANTFGGNPVAAAAALATLEELEE----GLLENAQKLGE 349 (441)
T ss_pred E---EEccccc-CCcccEEEEEeh--------hhhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHH----HHHHHHHHHHH
Confidence 3 4689975 689999999863 454332222233446688999999999886433 44555666666
Q ss_pred HHHHHhhc----CCCCCCCCCCCCceEEEEecCcccccCC-CCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cC
Q 014603 328 ICCDRLKE----IPCITCPKKPEGSMFVMVKLNYSLLEGI-NSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VE 400 (422)
Q Consensus 328 ~l~~~L~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~ 400 (422)
+|++.|++ ++.+. ....-|.++.+.+.....+.. .....+... +.++||++.+.. .+.+|++++ ++
T Consensus 350 ~l~~~L~~l~~~~~~~~--~vrg~G~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~Gil~~~~~----~~~lr~~p~l~~t 422 (441)
T PRK05769 350 YLRKELKELKEKYEFIG--DVRGLGLMIGVELVKDRKEPDPKLRDKVLYE-AFKRGLLLLGAG----KSAIRIIPPLIIT 422 (441)
T ss_pred HHHHHHHHHHHhCCCee--eeecceEEEEEEeccCCccccHHHHHHHHHH-HHhCCcEEecCC----CCEEEEeCCCCCC
Confidence 66666654 33221 122336666666632110000 012234444 456799997642 367999987 69
Q ss_pred hHHHHHHHHHHHHHHHHh
Q 014603 401 PSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 401 ~~~l~~~~~~l~~~~~~~ 418 (422)
+++|+++++++++++++.
T Consensus 423 ~~~id~~~~~l~~~l~~~ 440 (441)
T PRK05769 423 EEEADIGLEILEEAIKEL 440 (441)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 999999999999998764
No 262
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.90 E-value=1e-20 Score=179.56 Aligned_cols=229 Identities=18% Similarity=0.098 Sum_probs=160.1
Q ss_pred CCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHH----HhhCCCeEEEee
Q 014603 87 VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEAR----ATHSHLEVRHFD 162 (422)
Q Consensus 87 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~----~~~~g~~~~~~~ 162 (422)
+....|++.++++.+ .+..+++++|++|+..++.+++++||+|+++...|.+.... +...|++++.++
T Consensus 69 p~~~~Le~~lA~l~g--------~~~av~~sSG~aAi~~al~all~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vd 140 (436)
T PRK07812 69 PTQDVVEQRIAALEG--------GVAALLLASGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFVE 140 (436)
T ss_pred chHHHHHHHHHHHhC--------CCeEEEEccHHHHHHHHHHHHhCCCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEEC
Confidence 345788888888873 34578888999999999999999999999999888765432 334566666653
Q ss_pred ccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccC
Q 014603 163 LLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG 242 (422)
Q Consensus 163 ~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~ 242 (422)
++ .|++.+++.+++++++|++.+|+||+|.+. ++++|.++|+++|+++|+|+++.. +....++ .++
T Consensus 141 -d~-----~d~e~l~~ai~~~tklV~ie~~sNp~G~v~---Dl~~I~~la~~~gi~liVD~t~a~----~~~~~pl-~~G 206 (436)
T PRK07812 141 -DP-----DDLDAWRAAVRPNTKAFFAETISNPQIDVL---DIPGVAEVAHEAGVPLIVDNTIAT----PYLIRPL-EHG 206 (436)
T ss_pred -CC-----CCHHHHHHhCCCCCeEEEEECCCCCCCeec---CHHHHHHHHHHcCCEEEEECCCcc----cccCCch-hcC
Confidence 11 388999999998999999999999999994 688888999999999999999864 2112222 233
Q ss_pred CCCCeEEEecCccccCCCCceeEEEEeeCCCCccc-----------------------chhHHHHHH--hhhhhccCcch
Q 014603 243 SIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQ-----------------------DSGIVDSIK--SFLNISSDPAT 297 (422)
Q Consensus 243 ~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~-----------------------~~~~~~~~~--~~~~~~~~~~~ 297 (422)
.| +++.|++|.+++.|--+|.+++......++ ++.++.+.. .........++
T Consensus 207 aD---ivv~S~tK~lgg~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p 283 (436)
T PRK07812 207 AD---IVVHSATKYLGGHGTAIAGVIVDGGTFDWTQGRFPGFTTPDPSYHGVVFAELGPPAYALKARVQLLRDLGSAISP 283 (436)
T ss_pred CC---EEEEecccccCCCCCeEEEEEEcCCccccccccccccccCCcccccchhhhcchhHHHHHHHHHHHHhcCCCCCH
Confidence 33 788999999988876677766642210000 011111111 11122335566
Q ss_pred HHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 014603 298 FIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKP 345 (422)
Q Consensus 298 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 345 (422)
...+.+..-|+. +..+.++..++...+.+.|+++|.+.-+.+|
T Consensus 284 ~~a~l~~rgl~t-----L~~R~~~~~~nA~~la~~L~~~p~v~~V~yP 326 (436)
T PRK07812 284 FNAFLIAQGLET-----LSLRIERHVANAQRVAEFLEARDEVASVNYA 326 (436)
T ss_pred HHHHHHhcCcCc-----HHHHHHHHHHHHHHHHHHHHhCCCccEEECC
Confidence 666655555554 6777888889999999999998876544444
No 263
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.90 E-value=2.4e-20 Score=176.73 Aligned_cols=308 Identities=19% Similarity=0.192 Sum_probs=205.1
Q ss_pred HHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHh-cCCCCEEEecCCC
Q 014603 65 SVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVL-ARPGANILLPRPG 143 (422)
Q Consensus 65 ~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l-~~~gd~Vl~~~~~ 143 (422)
++-.+++.+.+..+. |.......++|+.++++++. ++.++++|+++|+..++.++ +++||+|+++.++
T Consensus 10 ~~~~~~v~~~~~~~~---~~~g~~~~~le~~la~~~g~--------~~~v~~~sgt~al~~~l~al~~~~Gd~Viv~~~~ 78 (380)
T TIGR03588 10 QDDIDAVVEVLKSDF---LTQGPTVPAFEEALAEYVGA--------KYAVAFNSATSALHIACLALGVGPGDRVWTTPIT 78 (380)
T ss_pred HHHHHHHHHHHhcCC---ccCChhHHHHHHHHHHHHCC--------CeEEEEcCHHHHHHHHHHHcCCCCCCEEEeCCcc
Confidence 455777777776543 33334578999999999942 35667778999999999998 7899999999999
Q ss_pred ccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhc----CCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEE
Q 014603 144 FPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALAD----ENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMV 219 (422)
Q Consensus 144 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~----~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~l 219 (422)
|.++...+...|++++.+++++ +++.+|++.+++.++ ++++++++++ ++|.. .++++|.++|+++|++|
T Consensus 79 ~~~~~~~~~~~G~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~t~~v~~~~---~~G~~---~~~~~i~~l~~~~~~~l 151 (380)
T TIGR03588 79 FVATANCALYCGAKVDFVDIDP-DTGNIDEDALEKKLAAAKGKLPKAIVPVD---FAGKS---VDMQAIAALAKKHGLKI 151 (380)
T ss_pred hHHHHHHHHHcCCEEEEEecCC-CcCCcCHHHHHHHhhcccCCCceEEEEeC---CCCcc---CCHHHHHHHHHHcCCEE
Confidence 9999888889999999999865 346789999999988 6788887554 57877 45888899999999999
Q ss_pred EEcccccccc-cCCCCCCCccc--cCCCCCeEEEecCc--cccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhhhcc-
Q 014603 220 IADEVYDHLA-FGNTPFVPMGV--FGSIVPVLTLGSIS--KRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISS- 293 (422)
Q Consensus 220 i~D~~~~~~~-~~~~~~~~~~~--~~~~~~~i~i~s~s--K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 293 (422)
|+|++|+... +.+.. +.. ++ .+.+.|++ |.++.+ ..|++++.+ +++.++++.......
T Consensus 152 I~D~a~a~g~~~~~~~---~g~~~~~----d~~~~S~~~~K~~~~~--~GG~v~~~~-------~~~~~~~~~~~~~g~~ 215 (380)
T TIGR03588 152 IEDASHALGAEYGGKP---VGNCRYA----DATVFSFHPVKIITTA--EGGAVTTND-------EELAERMRLLRSHGIT 215 (380)
T ss_pred EEECCCcccCccCCEe---CCCcccc----ceEEEecCCCCccccc--CceEEEECC-------HHHHHHHHHHHHCCCC
Confidence 9999998642 33321 111 21 27777776 876443 357777764 456666654322110
Q ss_pred -------------------------CcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCC-
Q 014603 294 -------------------------DPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEG- 347 (422)
Q Consensus 294 -------------------------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~- 347 (422)
..+.+..+.+...| ..+++..++-+++.+++.+.|+++|++.....+.+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~g~n~~m~~l~aa~g~~qL-----~~l~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~ 290 (380)
T TIGR03588 216 KDPLLFEKQDEGPWYYEQQELGFNYRMTDIQAALGLSQL-----KKLDRFVAKRREIAARYDRLLKDLPYFTPLTIPLGS 290 (380)
T ss_pred CCcccccccccCcceeeeeccccccCccHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCC
Confidence 00111112222222 22567777788888899999999877663322211
Q ss_pred --ceE-EEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCC-----------CC----------CCeEEEEec--cCh
Q 014603 348 --SMF-VMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITV-----------GL----------KDWLRITFA--VEP 401 (422)
Q Consensus 348 --g~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~-----------~~----------~~~iRis~~--~~~ 401 (422)
..+ +.+.++.. .+ .+..++...| +++||.+.....+ .. ...+++.+. .++
T Consensus 291 ~~~~~~~~i~~~~~--~~-~~r~~l~~~L-~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~ 366 (380)
T TIGR03588 291 KSAWHLYPILLDQE--FG-CTRKEVFEAL-RAAGIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHPALTL 366 (380)
T ss_pred EeEEEEEEEEECCc--CC-CCHHHHHHHH-HHCCCCcccCCcccccChhhhccCCcCCCcHHHHHHhceEEcCCCCCCCH
Confidence 122 22233321 01 1455666655 6779988643311 00 255777766 688
Q ss_pred HHHHHHHHHHHHHH
Q 014603 402 SALEDGLGRMKAFY 415 (422)
Q Consensus 402 ~~l~~~~~~l~~~~ 415 (422)
++++..++.|++++
T Consensus 367 ~dv~~i~~~l~~~~ 380 (380)
T TIGR03588 367 EQQQRVVETLRKVL 380 (380)
T ss_pred HHHHHHHHHHHHhC
Confidence 99999999988764
No 264
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.90 E-value=9.7e-21 Score=177.75 Aligned_cols=214 Identities=18% Similarity=0.193 Sum_probs=149.8
Q ss_pred CCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchH----HHHhhCCCeEEEeec
Q 014603 88 GILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYE----ARATHSHLEVRHFDL 163 (422)
Q Consensus 88 g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~----~~~~~~g~~~~~~~~ 163 (422)
....|+++++++.+ .+..+++++|+.|+.+++ .++++||+|+++++.|.+.. ..+...|++++.++.
T Consensus 51 ~~~~Le~~la~l~g--------~~~al~~~SG~~Al~~~l-~~l~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~vd~ 121 (380)
T PRK06176 51 TRFALEELIADLEG--------GVKGFAFASGLAGIHAVF-SLFQSGDHVLLGDDVYGGTFRLFDKVLVKNGLSCTIIDT 121 (380)
T ss_pred hHHHHHHHHHHHhC--------CCCEEEECCHHHHHHHHH-HHcCCCCEEEEcCCChhHHHHHHHHHHHhcCeEEEEcCC
Confidence 36788999999873 234566677788998777 46789999999999997543 344556777776643
Q ss_pred cCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCC
Q 014603 164 LPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS 243 (422)
Q Consensus 164 ~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~ 243 (422)
.|++.+++.++++++++++++|+||+|.+. ++++|.++|+++|+++|+|++|+...+ +. ++ .++.
T Consensus 122 -------~d~e~l~~ai~~~t~lV~lesP~Nptg~~~---di~~I~~la~~~gi~vivD~t~a~~~~-~~---p~-~~ga 186 (380)
T PRK06176 122 -------SDLSQIKKAIKPNTKALYLETPSNPLLKIT---DLAQCASVAKDHGLLTIVDNTFATPYY-QN---PL-LLGA 186 (380)
T ss_pred -------CCHHHHHHhcCcCceEEEEECCCCCCceec---CHHHHHHHHHHcCCEEEEECCcccccc-CC---cc-ccCC
Confidence 378999999988999999999999999995 578889999999999999999975322 11 22 2333
Q ss_pred CCCeEEEecCccccCCCC-ceeEEEEeeCCCCcccchhHHHHHHhhhhhc-cCcchHHHHHHHHHHhhchHHHHHHHHHH
Q 014603 244 IVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKSFLNIS-SDPATFIQGAVPQILEKTEEEFFSKITDI 321 (422)
Q Consensus 244 ~~~~i~i~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~ 321 (422)
| +++.|++|.++++| .-.|++++++ +++.+++....... ...++...+.+...++. +..+.++
T Consensus 187 D---ivv~S~tK~l~g~~d~~gG~vv~~~-------~~~~~~~~~~~~~~G~~~~~~~~~l~~~gl~t-----l~~R~~~ 251 (380)
T PRK06176 187 D---IVVHSGTKYLGGHSDVVAGLVTTNN-------EALAQEIAFFQNAIGGVLGPQDSWLLQRGIKT-----LGLRMEA 251 (380)
T ss_pred C---EEEecCceeccCCccceeeEEEecH-------HHHHHHHHHHHHHhcCCCCHHHHHHHHhccCc-----HHHHHHH
Confidence 3 89999999987765 3456666643 35666665544432 23344444443333332 4455566
Q ss_pred HHHHHHHHHHHhhcCCCCC
Q 014603 322 LRETADICCDRLKEIPCIT 340 (422)
Q Consensus 322 ~~~~~~~l~~~L~~~~~~~ 340 (422)
..++...+.+.|+++|.+.
T Consensus 252 ~~~~a~~la~~L~~~p~v~ 270 (380)
T PRK06176 252 HQKNALCVAEFLEKHPKVE 270 (380)
T ss_pred HHHHHHHHHHHHHhCCCee
Confidence 6677777888888776654
No 265
>PRK07678 aminotransferase; Validated
Probab=99.90 E-value=1.8e-20 Score=179.78 Aligned_cols=355 Identities=14% Similarity=0.104 Sum_probs=213.8
Q ss_pred cCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHH
Q 014603 42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ 121 (422)
Q Consensus 42 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 121 (422)
.+|+.+|||..|......+ ..+|++.+++.+++...... .. ....+.+..+++.|.+..+ ..+.++|+++|++
T Consensus 44 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~q~~~~~~~--~~-~~~~~~~~~lae~l~~~~~---~~~~v~f~~sGse 116 (451)
T PRK07678 44 IQGNRYLDGMSGLWCVNVG-YGRKELAEAAYEQLKTLSYF--PL-TQSHEPAIKLAEKLNEWLG---GEYVIFFSNSGSE 116 (451)
T ss_pred CCCCEEEEccccHHhhcCC-CCCHHHHHHHHHHHHhcCcc--cc-ccCCHHHHHHHHHHHHhCC---CCCEEEEeCCcHH
Confidence 4689999998886543333 45789999999998863221 11 1112333445555544332 2358999999999
Q ss_pred HHHHHHHHhcC-------CC-CEEEecCCCccchHHHHhhC-CC------------eEEEeeccCCCC--cc-----cCH
Q 014603 122 AIEVILTVLAR-------PG-ANILLPRPGFPYYEARATHS-HL------------EVRHFDLLPAKG--WE-----VDL 173 (422)
Q Consensus 122 a~~~~~~~l~~-------~g-d~Vl~~~~~~~~~~~~~~~~-g~------------~~~~~~~~~~~~--~~-----~d~ 173 (422)
|++.+++.... +| .+|+....+||++...+... +. .+..++...... +. .+.
T Consensus 117 A~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (451)
T PRK07678 117 ANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYRMPGIESEDIYDL 196 (451)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCCccccccccCChHHHHH
Confidence 99999876421 23 68999999999876544422 11 111121110000 00 011
Q ss_pred ---HHHHHhhc---CCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCC
Q 014603 174 ---DAVEALAD---ENTVALVIINP-GNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIV 245 (422)
Q Consensus 174 ---~~l~~~~~---~~~~~i~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~ 245 (422)
+.+++.+. ++..+.+|..| +...|.+ +|++.++++.++|++||+++|+||++.++.++|... ....++..+
T Consensus 197 ~~~~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~-~~~~~gv~P 275 (451)
T PRK07678 197 ECVKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGKAF-GFMNYGVKP 275 (451)
T ss_pred HHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCchhH-HHHhcCCCC
Confidence 22455553 34566677777 4445654 677889999999999999999999999887777432 223344334
Q ss_pred CeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhh-------hhhccCcchHHHHHHHHHHhhchHH-HHHH
Q 014603 246 PVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSF-------LNISSDPATFIQGAVPQILEKTEEE-FFSK 317 (422)
Q Consensus 246 ~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~ 317 (422)
+++ +++|.++...+++|.++++ +++++.+... ...+.+.++++++++.+.|+...++ .+++
T Consensus 276 Div---t~gK~lggG~~Pi~av~~~--------~~i~~~~~~~~~~~~~~h~~T~~gnp~~~aaa~a~l~~l~~~~~~~~ 344 (451)
T PRK07678 276 DII---TMAKGITSAYLPLSATAVK--------KEIYEAFKGKGEYEHFRHVNTFGGNPAACALALKNLEIMENENLIER 344 (451)
T ss_pred CEE---EeecccccCCcceeEEEEc--------HHHHHHHhccCcccccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHH
Confidence 444 4479964433799999986 4677776531 2345678899999999999865432 2233
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccc-cC---CCCHHHHHHHHHHhcCeEEecCCC--CCCCC
Q 014603 318 ITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLL-EG---INSDMEFALKLAKEESVIVLPGIT--VGLKD 391 (422)
Q Consensus 318 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~---~~~~~~~~~~l~~~~gi~v~~g~~--~~~~~ 391 (422)
..+.-...++.+.+.+++++.+. . ....|.++.+.+..... .. ......+... +.++||++.+... ....+
T Consensus 345 ~~~~g~~l~~~l~~~~~~~~~v~-~-vrg~Gl~~~i~~~~~~~~~~~~~~~~a~~i~~~-l~~~Gv~~~~~g~~v~~~~~ 421 (451)
T PRK07678 345 SAQLGELLLEQLKEELGEHPLVG-D-IRGKGLLVGIELVNDKETKEPADNDKVASVVAA-CKEKGLIIGKNGDTVAGYNN 421 (451)
T ss_pred HHHHHHHHHHHHHHHHhcCCCEE-E-EEeeceEEEEEEecCCcccCcCchHHHHHHHHH-HHHCCcEEeecCccccCCCC
Confidence 22222333344444444444322 1 23346666666632110 00 0012334444 4567999976321 12247
Q ss_pred eEEEEec--cChHHHHHHHHHHHHHHHHh
Q 014603 392 WLRITFA--VEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 392 ~iRis~~--~~~~~l~~~~~~l~~~~~~~ 418 (422)
.+|+++. +++++|+++++++.++++++
T Consensus 422 ~lrl~Ppl~it~~eid~~~~~l~~~l~~~ 450 (451)
T PRK07678 422 VLTLSPPLVISSEEIAFIVGTLKTALERI 450 (451)
T ss_pred EEEEECCCcCCHHHHHHHHHHHHHHHHhc
Confidence 8999987 69999999999999999765
No 266
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.90 E-value=1.6e-20 Score=178.80 Aligned_cols=227 Identities=16% Similarity=0.142 Sum_probs=161.1
Q ss_pred CCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchH----HHHhhCCCeEEEeec
Q 014603 88 GILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYE----ARATHSHLEVRHFDL 163 (422)
Q Consensus 88 g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~----~~~~~~g~~~~~~~~ 163 (422)
...++++.++++.+ .+..+++++|++|+.+++.+++++||+|+++.+.|.+.. ..+...|++++.++.
T Consensus 64 ~~~~le~~lA~l~g--------~~~al~~~SG~~Ai~~al~all~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 135 (427)
T PRK05994 64 TNAVLEERVAALEG--------GTAALAVASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADA 135 (427)
T ss_pred cHHHHHHHHHHHhC--------CCcEEEEcCHHHHHHHHHHHHhCCCCEEEEecCcchhHHHHHHHHHHhcCcEEEEECC
Confidence 45788889998872 345888999999999999999999999999999998643 335667888877753
Q ss_pred cCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCC
Q 014603 164 LPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS 243 (422)
Q Consensus 164 ~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~ 243 (422)
.|++.+++.++++++++++++|+||+|.++ ++++|.++|+++|+++|+|+++.. +....++ .++.
T Consensus 136 -------~d~~~l~~ai~~~tklV~vesp~NptG~v~---dl~~I~~la~~~gi~livD~a~a~----~~~~~pl-~~ga 200 (427)
T PRK05994 136 -------DDPASFERAITPRTKAIFIESIANPGGTVT---DIAAIAEVAHRAGLPLIVDNTLAS----PYLIRPI-EHGA 200 (427)
T ss_pred -------CCHHHHHHhcCcCCeEEEEECCCCCCCeec---CHHHHHHHHHHcCCEEEEECCccc----cccCCcc-ccCC
Confidence 278899999988999999999999999996 478889999999999999999974 2212222 2344
Q ss_pred CCCeEEEecCccccCCCCceeEEEEeeCCCCcccc-----------hh-----HHH-----------HHHhhhhhccCcc
Q 014603 244 IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQD-----------SG-----IVD-----------SIKSFLNISSDPA 296 (422)
Q Consensus 244 ~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~-----------~~-----~~~-----------~~~~~~~~~~~~~ 296 (422)
| +++.|++|.++.+|-.+|.+++......+.. +. +.+ ............+
T Consensus 201 D---ivv~S~tK~lgg~~~~~gG~v~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 277 (427)
T PRK05994 201 D---IVVHSLTKFLGGHGNSMGGIIVDGGTFDWSKSGKYPMLSEPRPEYHGLVLHETFGNFAFAIAARVLGLRDLGPAIS 277 (427)
T ss_pred c---EEEEcCccccCCCCCcEEEEEEeCCccccccccccccccCCcchhhhhhHHHHhhhhhhHHHHHHHHHHhcCCCCC
Confidence 4 8899999998887766776665321100000 00 111 1111122223455
Q ss_pred hHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 014603 297 TFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKP 345 (422)
Q Consensus 297 ~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 345 (422)
++..+.+..-|+. +..+.++..++...+.+.|+++|.+.-+.+|
T Consensus 278 ~~~A~l~~~~l~t-----L~~r~~~~~~~a~~la~~L~~~p~v~~v~yP 321 (427)
T PRK05994 278 PFNAFLILTGIET-----LPLRMQRHSDNALAVAEWLKGHPKVSWVNYA 321 (427)
T ss_pred HHHHHHHHcCccc-----HHHHHHHHHHHHHHHHHHHHhCCCccEEECC
Confidence 5555555555554 6777788888899999999988876533333
No 267
>PRK06541 hypothetical protein; Provisional
Probab=99.90 E-value=2.4e-20 Score=178.96 Aligned_cols=355 Identities=13% Similarity=0.093 Sum_probs=221.3
Q ss_pred cCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHH
Q 014603 42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ 121 (422)
Q Consensus 42 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 121 (422)
.+|+.+|||..|......+ ..+|.+.+++.+++..... +.......+.+..+++.+.+.. +...+.++|+++|++
T Consensus 49 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~Av~~q~~~~~~--~~~~~~~~~~~~~la~~l~~~~--p~~~~~v~f~~sGse 123 (460)
T PRK06541 49 DRGKRYLDGLAGLFVVQVG-HGRAELAEAAAKQAGTLAF--FPLWSYAHPPAIELAERLAALA--PGDLNRVFFTTGGSE 123 (460)
T ss_pred CCCCEEEECCccHHhccCC-CCCHHHHHHHHHHHhhCcC--ccccccCCHHHHHHHHHHHHhC--CCCcCEEEEcCCcHH
Confidence 4689999999886443233 4578999999999976321 1111112233444555554422 223468999999999
Q ss_pred HHHHHHHHhcC--------CCCEEEecCCCccchHHHHhhC-CC------------eEEEeeccCCCC---cccC-----
Q 014603 122 AIEVILTVLAR--------PGANILLPRPGFPYYEARATHS-HL------------EVRHFDLLPAKG---WEVD----- 172 (422)
Q Consensus 122 a~~~~~~~l~~--------~gd~Vl~~~~~~~~~~~~~~~~-g~------------~~~~~~~~~~~~---~~~d----- 172 (422)
|++.+++.... ...+|+....+||+....+... +. .+..++...... +.-+
T Consensus 124 Ave~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 203 (460)
T PRK06541 124 AVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFG 203 (460)
T ss_pred HHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCccccccccCCCHHHHH
Confidence 99999875421 1368999999999875443322 11 112222110000 1112
Q ss_pred ---HHHHHHhhc---CCceEEEEeCC-CCCccccc-CHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCC
Q 014603 173 ---LDAVEALAD---ENTVALVIINP-GNPCGNVY-TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSI 244 (422)
Q Consensus 173 ---~~~l~~~~~---~~~~~i~i~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~ 244 (422)
++.+++.+. ++..++++..| ++++|.+. |.+.+++|.++|++||+++|+||++.++...|... ....++..
T Consensus 204 ~~~~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G~~~-a~~~~gv~ 282 (460)
T PRK06541 204 RWAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGEMF-GCERFGYV 282 (460)
T ss_pred HHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchhh-hhhhcCCC
Confidence 255666664 35677778888 78889865 58889999999999999999999998876666532 22223333
Q ss_pred CCeEEEecCccccCCCCc-eeEEEEeeCCCCcccchhHHHHHHhh-----hhhccCcchHHHHHHHHHHhhchHHHHHHH
Q 014603 245 VPVLTLGSISKRWIVPGW-RLGWLVTSDPNGILQDSGIVDSIKSF-----LNISSDPATFIQGAVPQILEKTEEEFFSKI 318 (422)
Q Consensus 245 ~~~i~i~s~sK~~~~~G~-r~G~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~ 318 (422)
++++ +++|.++ .|+ ++|+++++ +++++.+... ...+...++++.+++.+.|+...+ +..
T Consensus 283 PDiv---t~gK~l~-~G~~pigav~~~--------~~i~~~~~~~~~~~~~~~T~~gnp~~~aaala~l~~l~~---~~~ 347 (460)
T PRK06541 283 PDII---TCAKGIT-SGYSPLGAMIAS--------DRLFEPFLDGPTMFLHGYTFGGHPVSAAVALANLDIFER---EGL 347 (460)
T ss_pred CCEE---Eeccccc-CCccceeEEEEc--------HHHHHHhhcCCCccccCCCCCCCHHHHHHHHHHHHHHHh---ccH
Confidence 3333 4789965 776 99999986 4666666432 122456778888888888876332 234
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCC-CCCCCceEEEEecCccc--ccCCCC------HHHHHHHHHHhcCeEEecCCCCCC
Q 014603 319 TDILRETADICCDRLKEIPCITCP-KKPEGSMFVMVKLNYSL--LEGINS------DMEFALKLAKEESVIVLPGITVGL 389 (422)
Q Consensus 319 ~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~g~~~~~~~~~~~--~~~~~~------~~~~~~~l~~~~gi~v~~g~~~~~ 389 (422)
.++++++.+++.+.|+++....++ .....|.++.+.+.... ...... ....+...+.++||++.+.. . .
T Consensus 348 ~~~~~~~g~~l~~~L~~l~~~~~v~~vrg~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-~-g 425 (460)
T PRK06541 348 LDHVRDNEPAFRATLEKLLDLPIVGDVRGDGYFYGIELVKDKATKETFTDDESERLLRGFLSPALFEAGLYCRADD-R-G 425 (460)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCeEEEEecceEEEEEEecCcccccCCcchhhhhhHHHHHHHHHHhCCeEEEecC-C-C
Confidence 566777777777777765222111 12244667667663210 000000 00122333456799998731 1 1
Q ss_pred CCeEEEEec--cChHHHHHHHHHHHHHHHHhc
Q 014603 390 KDWLRITFA--VEPSALEDGLGRMKAFYDRHA 419 (422)
Q Consensus 390 ~~~iRis~~--~~~~~l~~~~~~l~~~~~~~~ 419 (422)
.+.+|+++. +++++|++++++|.+++.+..
T Consensus 426 ~~~lrl~Ppl~~t~~~id~~~~~l~~~l~~~~ 457 (460)
T PRK06541 426 DPVVQLAPPLISGQEEFDEIEQILRSVLTEAW 457 (460)
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 368999998 899999999999999997653
No 268
>PRK07482 hypothetical protein; Provisional
Probab=99.90 E-value=1.7e-20 Score=180.21 Aligned_cols=353 Identities=16% Similarity=0.101 Sum_probs=217.6
Q ss_pred cCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCC-CCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHH
Q 014603 42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSS-TVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT 120 (422)
Q Consensus 42 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~-~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~ 120 (422)
.+|+.+|||..|......+ ..+|++.+++.+++..... +.. .....+.+..+|+.|.+..+ .+.+.++|+++|+
T Consensus 47 ~dG~~ylD~~sg~~~~~lG-h~~p~v~~Av~~q~~~~~~--~~~~~~~~~~~~~~lAe~L~~~~p--~~~~~v~f~~sGS 121 (461)
T PRK07482 47 AQGRRYIDAFAGLYCVNVG-YGRTEVAEAIAEQAKELAY--YHTYVGHGTEASITLSKRIIDRAP--AGMSKVYYGLSGS 121 (461)
T ss_pred CCCCEEEEcccchhhhcCC-CCCHHHHHHHHHHHHhcCc--cccccccCCHHHHHHHHHHHHhCC--CCcCEEEEeCchH
Confidence 3699999999987654333 4578999999999986321 111 01123445556665554322 2346899999999
Q ss_pred HHHHHHHHHhc------C-C-CCEEEecCCCccchHHHHhhCCC-------------eEEEeeccCCCC---cc------
Q 014603 121 QAIEVILTVLA------R-P-GANILLPRPGFPYYEARATHSHL-------------EVRHFDLLPAKG---WE------ 170 (422)
Q Consensus 121 ~a~~~~~~~l~------~-~-gd~Vl~~~~~~~~~~~~~~~~g~-------------~~~~~~~~~~~~---~~------ 170 (422)
+|++.+++... . + ..+|+....+||+....+..... .+..++...... ..
T Consensus 122 EAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 201 (461)
T PRK07482 122 DANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQF 201 (461)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCccccccccCCCHHHH
Confidence 99999988653 1 2 26799999999987543332111 111111110000 00
Q ss_pred --cCHHHHHHhhc---CCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCC
Q 014603 171 --VDLDAVEALAD---ENTVALVIINP-GNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS 243 (422)
Q Consensus 171 --~d~~~l~~~~~---~~~~~i~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~ 243 (422)
.+++.+++.+. ++..+.+|..| +...|.+ +|.+.+++|.++|++||+++|.||++.++.++|... ....++.
T Consensus 202 ~~~~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~-a~~~~gv 280 (461)
T PRK07482 202 SAYCADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLGSMF-GSDHYGI 280 (461)
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCcchh-hHHhcCC
Confidence 03466677663 24466677777 5555665 677889999999999999999999999988777543 2233444
Q ss_pred CCCeEEEecCccccCCCCc-eeEEEEeeCCCCcccchhHHHHHHhh--------hhhccCcchHHHHHHHHHHhhchHH-
Q 014603 244 IVPVLTLGSISKRWIVPGW-RLGWLVTSDPNGILQDSGIVDSIKSF--------LNISSDPATFIQGAVPQILEKTEEE- 313 (422)
Q Consensus 244 ~~~~i~i~s~sK~~~~~G~-r~G~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~a~~~~l~~~~~~- 313 (422)
.++++++ +|.+ ..|. ++|.++++ +++.+.+... ...+.+.++++++++.+.|+...++
T Consensus 281 ~PDiv~~---gKgl-~gG~~Pi~av~~~--------~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~~~~~~ 348 (461)
T PRK07482 281 EPDLITV---AKGL-TSAYAPLSGSIVG--------EKVWDVLEQGSDEHGAIGHGWTYSGHPICAAAALANLDILEREN 348 (461)
T ss_pred CCCEEEE---cccc-ccCccccceeeec--------HHHHHHHhcccccCCccccCCCCCcCHHHHHHHHHHHHHHHhCC
Confidence 4444544 6995 5574 89988885 4666666421 2235578899999999999865432
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccc--cCCCC----HHHHHHHHHHhcCeEEecCCCC
Q 014603 314 FFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLL--EGINS----DMEFALKLAKEESVIVLPGITV 387 (422)
Q Consensus 314 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~----~~~~~~~l~~~~gi~v~~g~~~ 387 (422)
.+++..+.-...++.+.+.++++|.+. . ...-|.++.+.+..... ..... ...+... +.++|+++.++.
T Consensus 349 l~~~~~~~g~~l~~~L~~l~~~~~~v~-~-vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~-~~~~Gvl~~~~~-- 423 (461)
T PRK07482 349 LVGNAAEVGAYFRARLRAAFGDHPLVG-E-VRGVGMLAAVEFVADRDDRTPFDPALKIGPQVSAA-ALERGVIARAMP-- 423 (461)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCEE-E-EeeceeEEEEEeccCCCcCCCCChhhHHHHHHHHH-HHHCCcEEecCC--
Confidence 233332223333333333334454332 1 23446777777743110 00000 1234444 456799986532
Q ss_pred CCCCeEEEEec--cChHHHHHHHHHHHHHHHHh
Q 014603 388 GLKDWLRITFA--VEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 388 ~~~~~iRis~~--~~~~~l~~~~~~l~~~~~~~ 418 (422)
..+.+|+.++ +++++|+++++++.+++++.
T Consensus 424 -~~~~i~~~Ppl~it~~ei~~~~~~l~~~l~~~ 455 (461)
T PRK07482 424 -HGDILGFAPPLVLTRAEADEIVAIAKDAVDEV 455 (461)
T ss_pred -CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 1367899876 79999999999999999775
No 269
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.89 E-value=2.7e-20 Score=178.25 Aligned_cols=350 Identities=17% Similarity=0.156 Sum_probs=210.7
Q ss_pred cCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCC--CCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCH
Q 014603 42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFN--CYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGC 119 (422)
Q Consensus 42 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~--~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~ 119 (422)
.+|+.+|||..|......+ ..+|++.+++.+++.+.... .|.. .+.+..+++.|.+.. +...+.++|+++|
T Consensus 50 ~dG~~ylD~~~g~~~~~lG-h~~p~i~~Ai~~ql~~~~~~~~~~~~----~~~~~~lae~L~~~~--p~~~~~v~f~~SG 122 (457)
T PRK05639 50 VDGNVFIDFLAGAAAASTG-YSHPKLVKAVQEQVALIQHSMIGYTH----SERAIRVAEKLAEIS--PIENPKVLFGLSG 122 (457)
T ss_pred CCCCEEEECCcCHHhhccC-CCCHHHHHHHHHHHHhccccccCccC----CHHHHHHHHHHHhhC--CCCcCEEEEeCch
Confidence 4688999998886443222 46789999999998763211 2222 133333444444322 2233689999999
Q ss_pred HHHHHHHHHHhc--CCCCEEEecCCCccchHHHHhhC-CC-------------eEEEeeccCCCC--cc----cCH----
Q 014603 120 TQAIEVILTVLA--RPGANILLPRPGFPYYEARATHS-HL-------------EVRHFDLLPAKG--WE----VDL---- 173 (422)
Q Consensus 120 ~~a~~~~~~~l~--~~gd~Vl~~~~~~~~~~~~~~~~-g~-------------~~~~~~~~~~~~--~~----~d~---- 173 (422)
++|++.+++... ....+|+....+||+....+... +. ++..+|...... +. -+.
T Consensus 123 sEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 202 (457)
T PRK05639 123 SDAVDMAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDELI 202 (457)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCccccccccccccCCHHHHH
Confidence 999999988653 23368999999999875443321 10 122233211000 00 022
Q ss_pred ----HHHHHhh-----cCCceEEEEeCC-CCCccc-ccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccC
Q 014603 174 ----DAVEALA-----DENTVALVIINP-GNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG 242 (422)
Q Consensus 174 ----~~l~~~~-----~~~~~~i~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~ 242 (422)
+.+++.+ .++..+.+|..| +...|. .+|.+.++++.++|++||+++|+||++.++..+|... ....++
T Consensus 203 ~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~-a~~~~g 281 (457)
T PRK05639 203 NRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGRTGKWF-ASEWFE 281 (457)
T ss_pred HHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCcCchHH-HHHhcC
Confidence 2344433 234566677777 555666 4678889999999999999999999999877666532 122233
Q ss_pred CCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHH
Q 014603 243 SIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDIL 322 (422)
Q Consensus 243 ~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~ 322 (422)
..+++++ ++|.+ ..|.++|+++++ +++++........+...+++..+++.+.|+...++. ..++.
T Consensus 282 v~PDiv~---~gK~l-~gG~pi~av~~~--------~~i~~~~~~~~~~T~~g~p~~~aaa~a~l~~l~~~~---l~~~~ 346 (457)
T PRK05639 282 VKPDLII---FGKGV-ASGMGLSGVIGR--------KELMDLTSGSALLTPAANPVISAAAEATLEIIEEEN---LLKNA 346 (457)
T ss_pred CCCCEEE---echhh-cCCCcceeEEeh--------HHHHhhcCCCcccCCCcCHHHHHHHHHHHHHHHHcc---HHHHH
Confidence 3333444 58995 457899999986 356652221222345678888888888887644222 22333
Q ss_pred HHHHHHHHHHhhc----CCCCCCCCCCCCceEEEEecCcccccC-CCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEe
Q 014603 323 RETADICCDRLKE----IPCITCPKKPEGSMFVMVKLNYSLLEG-INSDMEFALKLAKEESVIVLPGITVGLKDWLRITF 397 (422)
Q Consensus 323 ~~~~~~l~~~L~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~ 397 (422)
+++-++|++.|++ .+-+. . ...-|.++.+.+....... ......+... +.++|+++.+... ..+.+|+.+
T Consensus 347 ~~~g~~l~~~L~~l~~~~~~~~-~-VrG~Gl~~gve~~~~~~~~~~~~~~~~~~~-~~~~Gv~~~~~g~--~~~~lr~~P 421 (457)
T PRK05639 347 LKVGEFIKKRLLEMKESFEVIG-D-VRGKGLMIGVEIVKENGKPDPELTGKICWR-AFELGLILPSYGM--FGNVIRITP 421 (457)
T ss_pred HHHHHHHHHHHHHHHHhCCCEE-e-eccceeEEEEEEecCCCCCCHHHHHHHHHH-HHhCCeEEeecCC--CCCEEEEeC
Confidence 3344444444443 33222 1 2344666666663211000 0012334444 4567999976421 147899999
Q ss_pred c--cChHHHHHHHHHHHHHHHHhc
Q 014603 398 A--VEPSALEDGLGRMKAFYDRHA 419 (422)
Q Consensus 398 ~--~~~~~l~~~~~~l~~~~~~~~ 419 (422)
. .++++++++++++++++++..
T Consensus 422 pl~it~~~id~~~~~l~~~l~~~~ 445 (457)
T PRK05639 422 PLVITKEIAEKGLEIMERAIKDAL 445 (457)
T ss_pred CCccCHHHHHHHHHHHHHHHHHHH
Confidence 8 789999999999999998764
No 270
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.89 E-value=2.7e-20 Score=179.82 Aligned_cols=349 Identities=17% Similarity=0.144 Sum_probs=215.1
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCC-CCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSST-VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ 121 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~-~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 121 (422)
+|+.+|||..|......+ ..+|+|.+++.+++..... +... ....+....+++.|.+.+. +.+.+.++|+++|++
T Consensus 87 dG~~ylD~~sg~~~~~lG-h~hp~v~~Av~~ql~~~~~--~~~~~~~~~~~~~~lae~L~~~~~-~~~~~~v~f~~SGsE 162 (504)
T PLN02760 87 NGKKYLDALAGLWCTALG-GSEPRLVAAATEQLNKLPF--YHSFWNRTTKPSLDLAKELLEMFT-ARKMGKVFFTNSGSE 162 (504)
T ss_pred CCCEEEEcCcCHHhcccC-CCCHHHHHHHHHHHhhccc--eecccccCcHHHHHHHHHHHhhcC-CCCCCEEEEeCChHH
Confidence 689999999986554444 5689999999999976321 1110 1123444445555443211 223357999999999
Q ss_pred HHHHHHHHhc------C-CC-CEEEecCCCccchHHHHhh-CCCe------------EEEeeccCCCCcc----------
Q 014603 122 AIEVILTVLA------R-PG-ANILLPRPGFPYYEARATH-SHLE------------VRHFDLLPAKGWE---------- 170 (422)
Q Consensus 122 a~~~~~~~l~------~-~g-d~Vl~~~~~~~~~~~~~~~-~g~~------------~~~~~~~~~~~~~---------- 170 (422)
|++.+++... . ++ .+|+..+.+||+....+.. .|.. +..++.. ..+.
T Consensus 163 A~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p--~~~~~~~~~~~~~~ 240 (504)
T PLN02760 163 ANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCP--HYWRFHLPGETEEE 240 (504)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCC--cccccCCCCCcHHH
Confidence 9999998763 1 23 6899999999887543322 2211 1111110 0000
Q ss_pred ---cCHHHHHHhhc---CCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccC
Q 014603 171 ---VDLDAVEALAD---ENTVALVIINP-GNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG 242 (422)
Q Consensus 171 ---~d~~~l~~~~~---~~~~~i~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~ 242 (422)
...+.+++.+. ++..+.+|..| ....|.+ +|++.+++|.++|++||+++|+||++.+++++|... ....++
T Consensus 241 ~~~~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~-a~e~~g 319 (504)
T PLN02760 241 FSTRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGTMF-GCDKYN 319 (504)
T ss_pred HHHHHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccchhh-HHHhcC
Confidence 01134555552 24466677777 4455654 678889999999999999999999999887777643 233333
Q ss_pred CCCCeEEEecCccccCCCC-ceeEEEEeeCCCCcccchhHHHHHHhh--------hhhccCcchHHHHHHHHHHhhchHH
Q 014603 243 SIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKSF--------LNISSDPATFIQGAVPQILEKTEEE 313 (422)
Q Consensus 243 ~~~~~i~i~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~a~~~~l~~~~~~ 313 (422)
..++ +.+++|.++ .| +++|.++++ +++++.+... ...+.+.++++++++.+.|+...++
T Consensus 320 v~PD---ivtlgK~lg-gG~~PigAv~~~--------~~i~d~~~~~~~~~~~~~h~~T~~gnPl~~Aaala~Le~i~~~ 387 (504)
T PLN02760 320 IKPD---LVSLAKALS-SAYMPIGAVLVS--------PEISDVIHSQSNKLGSFAHGFTYSGHPVSCAVALEALKIYKER 387 (504)
T ss_pred CCCc---EEEeccccc-CCccccceEeec--------HHHHhhhhcccccccCcccCCCCCCCHHHHHHHHHHHHHHHhC
Confidence 3333 345689964 45 589998886 4677776531 2334567899999999999864422
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCC-CCCCCCceEEEEecCcccc-cC-CCC----HHHHHHHHHHhcCeEEecCCC
Q 014603 314 FFSKITDILRETADICCDRLKEIPCITC-PKKPEGSMFVMVKLNYSLL-EG-INS----DMEFALKLAKEESVIVLPGIT 386 (422)
Q Consensus 314 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~g~~~~~~~~~~~~-~~-~~~----~~~~~~~l~~~~gi~v~~g~~ 386 (422)
+..++++++.++|++.|+++....+ .....-|.++.+.+..... .. ... ...+... +.++||++.+.
T Consensus 388 ---~l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~-~~~~Gvl~~~~-- 461 (504)
T PLN02760 388 ---NIPEHVNKIAPRFQDGIKAFSGSPIIGEIRGTGLILGTEFVDNKSPNDPFPAEWGVGAYFGAE-CKKRGMLVRVA-- 461 (504)
T ss_pred ---CHHHHHHHHHHHHHHHHHHHhcCCCeeeEEeCceEEEEEEecCCcccccccchhHHHHHHHHH-HHhCCcEEEec--
Confidence 3445555555555555554311111 1122336666666633110 00 000 2234444 45679999774
Q ss_pred CCCCCeEEEEec--cChHHHHHHHHHHHHHHHHhc
Q 014603 387 VGLKDWLRITFA--VEPSALEDGLGRMKAFYDRHA 419 (422)
Q Consensus 387 ~~~~~~iRis~~--~~~~~l~~~~~~l~~~~~~~~ 419 (422)
.+.+|+++. +++++|++++++++++++++.
T Consensus 462 ---g~~lrl~Ppl~it~eeid~~~~~l~~al~~~~ 493 (504)
T PLN02760 462 ---GDNIMMSPPLIITPEEVDELISIYGKALKATE 493 (504)
T ss_pred ---CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 257899977 899999999999999987763
No 271
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.89 E-value=1.8e-20 Score=179.58 Aligned_cols=349 Identities=14% Similarity=0.055 Sum_probs=215.9
Q ss_pred cCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHH
Q 014603 42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ 121 (422)
Q Consensus 42 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 121 (422)
.+|+.+|||..|......+ ..+|++.+++.+++.+..... ......+.+..+++.+.+..+ ...+.++|+++|++
T Consensus 51 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~Ai~~ql~~~~~~~--~~~~~~~~~~~lAe~L~~~~p--~~~~~v~f~~sGse 125 (453)
T PRK06943 51 RDGRRYLDAISSWWVNLFG-HANPRINAALKDQLDTLEHAM--LAGCTHEPAIELAERLAALTG--GTLGHAFFASDGAS 125 (453)
T ss_pred CCCCEEEEcchHHHHhcCC-CCCHHHHHHHHHHHHhcCCcc--ccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCCCHH
Confidence 4689999998885443222 457899999999997632111 101112344445555544322 22358999999999
Q ss_pred HHHHHHHHhc-------CC-CCEEEecCCCccchHHHHhhCCC-------------eEEEeeccCCCC--cc--------
Q 014603 122 AIEVILTVLA-------RP-GANILLPRPGFPYYEARATHSHL-------------EVRHFDLLPAKG--WE-------- 170 (422)
Q Consensus 122 a~~~~~~~l~-------~~-gd~Vl~~~~~~~~~~~~~~~~g~-------------~~~~~~~~~~~~--~~-------- 170 (422)
|++.+++... .+ ..+|+....+||+....+..... .+..++.....+ +.
T Consensus 126 Ave~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 205 (453)
T PRK06943 126 AVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAADVAA 205 (453)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCccccccCCCHHHHHH
Confidence 9999988752 12 36899999999987533332111 111222111000 00
Q ss_pred cCHHHHHHhhc--CCceEEEEeCC--CCCccc-ccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCC
Q 014603 171 VDLDAVEALAD--ENTVALVIINP--GNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIV 245 (422)
Q Consensus 171 ~d~~~l~~~~~--~~~~~i~i~~p--~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~ 245 (422)
-+++.+++.+. .+..+.++..| +...|. .+|++.++++.++|++||+++|.||++.++.++|... ....++..+
T Consensus 206 ~~~~~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG~~f-a~~~~gv~P 284 (453)
T PRK06943 206 RALADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTGTFF-ACEQAGVWP 284 (453)
T ss_pred HHHHHHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCcchh-HHHhCCCCC
Confidence 12356666664 24456666777 566676 5688889999999999999999999999987777532 223344444
Q ss_pred CeEEEecCccccCCCC-ceeEEEEeeCCCCcccchhHHHHHHhh-------hhhccCcchHHHHHHHHHHhhchHHHHHH
Q 014603 246 PVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKSF-------LNISSDPATFIQGAVPQILEKTEEEFFSK 317 (422)
Q Consensus 246 ~~i~i~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~ 317 (422)
+++++ +|.+ ..| +++|.++++ +++.+.+... ...+.+.++++++++.+.|+...++.
T Consensus 285 Divt~---gKgl-~gG~~Pi~av~~~--------~ei~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~~~~--- 349 (453)
T PRK06943 285 DFLCL---SKGI-SGGYLPLSLVLSR--------DAIFAAFYDDDVTRGFLHSHSYTGNPLACRAALATLDLFAEDD--- 349 (453)
T ss_pred CeEee---ehhh-ccCcccceEEEEc--------HHHHHhhcccCccCCccCCCCCCCCHHHHHHHHHHHHHHHhcC---
Confidence 44554 6995 468 599999986 4677766421 22345678999999999998754322
Q ss_pred HHHHHHHHHHHHHHHhhc---CCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEE
Q 014603 318 ITDILRETADICCDRLKE---IPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLR 394 (422)
Q Consensus 318 ~~~~~~~~~~~l~~~L~~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iR 394 (422)
..++.+++-+++.+.|++ .+.+. . ...-|.++.+.+.............+... +.++||++.+.. +.+|
T Consensus 350 l~~~~~~~G~~l~~~L~~l~~~~~v~-~-vrG~Gl~~gvel~~~~~~~~~~~~~i~~~-~~~~Gll~~~~g-----~~l~ 421 (453)
T PRK06943 350 VLARNARKSARLRAALAPLAAHPQVR-H-LRQRGTIFAFDVALDGDAARTFSRRFFEA-ALERELLLRPIG-----TTVY 421 (453)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCEE-e-EeccccEEEEEEccCCCcchHHHHHHHHH-HHHCCcEEEecC-----CEEE
Confidence 233344444444444443 44433 1 23446677777742110000012334444 466799997642 4699
Q ss_pred EEec--cChHHHHHHHHHHHHHHHHhc
Q 014603 395 ITFA--VEPSALEDGLGRMKAFYDRHA 419 (422)
Q Consensus 395 is~~--~~~~~l~~~~~~l~~~~~~~~ 419 (422)
+++. .++++|++++++|+++++++.
T Consensus 422 ~~Ppl~it~~eid~~~~~l~~al~~~~ 448 (453)
T PRK06943 422 LMPPYVLDDDEIAWLAERTRATLDATL 448 (453)
T ss_pred EeCCCcCCHHHHHHHHHHHHHHHHHHH
Confidence 9966 899999999999999998764
No 272
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.89 E-value=5.3e-20 Score=176.25 Aligned_cols=351 Identities=13% Similarity=0.122 Sum_probs=213.0
Q ss_pred cCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCC-CCCEEEecCHH
Q 014603 42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLS-PDDVYLTLGCT 120 (422)
Q Consensus 42 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~-~~~i~~~~g~~ 120 (422)
.+|+.++||..|......+ ..+|.|.+++.+++.+... +.......+....+++.|.+..+ .. .+.++|+++|+
T Consensus 39 ~dG~~ylD~~~g~~~~~lG-H~~p~v~~Ai~~ql~~~~~--~~~~~~~~~~~~~lae~L~~~~p--~~~~~~v~f~~SGs 113 (445)
T PRK08593 39 VDGKTYIDLLASASSQNVG-HAPPRVVEAIKAQADKFIH--YTPAYMYHEPLVRLAKKLCELAP--GDFEKRVTFGLSGS 113 (445)
T ss_pred CCCCEEEECCccHHhhcCC-CCCHHHHHHHHHHHHhccC--ccccccCCHHHHHHHHHHHHhCC--CCCCCEEEECCchH
Confidence 3689999998886543333 3689999999999876322 11111112333444555543222 12 25899999999
Q ss_pred HHHHHHHHHhc--CCCCEEEecCCCccchHHHHhhC-CC-------------eEEEeeccCCCC--cc-cC-------HH
Q 014603 121 QAIEVILTVLA--RPGANILLPRPGFPYYEARATHS-HL-------------EVRHFDLLPAKG--WE-VD-------LD 174 (422)
Q Consensus 121 ~a~~~~~~~l~--~~gd~Vl~~~~~~~~~~~~~~~~-g~-------------~~~~~~~~~~~~--~~-~d-------~~ 174 (422)
+|++.+++... ....+|+..+.+||+....+... +. ++..+|...... +. .+ ++
T Consensus 114 eA~e~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 193 (445)
T PRK08593 114 DANDGIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLA 193 (445)
T ss_pred HHHHHHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHHH
Confidence 99999988532 12357899999999875443311 10 122232211000 00 01 13
Q ss_pred HHHHhhc----CCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeE
Q 014603 175 AVEALAD----ENTVALVIINP-GNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVL 248 (422)
Q Consensus 175 ~l~~~~~----~~~~~i~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i 248 (422)
.+++.+. .+..+.++..| ....|.. +|.+.+++|.++|++||+++|+||++.++.++|... ....++..++
T Consensus 194 ~~~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~GrtG~~~-a~~~~gv~pD-- 270 (445)
T PRK08593 194 PLKEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTGKWS-SISHFNITPD-- 270 (445)
T ss_pred HHHHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchHH-HHHhcCCCCC--
Confidence 3444332 23455666666 5666775 788899999999999999999999998887766431 1222332233
Q ss_pred EEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhh-hhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHH
Q 014603 249 TLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQGAVPQILEKTEEEFFSKITDILRETAD 327 (422)
Q Consensus 249 ~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~ 327 (422)
+.+++|.++ .|+++|+++++ +++++.+.... ..+...++++++++.+.|+...++ +..++++++.+
T Consensus 271 -i~t~gK~l~-~G~p~gav~~~--------~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~---~l~~~~~~~g~ 337 (445)
T PRK08593 271 -LMSFGKSLA-GGMPMSAIVGR--------KEIMESLEAPAHLFTTGANPVSCAAALATIDMIEDE---SLLQRSAEKGE 337 (445)
T ss_pred -Eeeeccccc-CCcccEEEEEc--------HHHHhhhccCCCCCCCCCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHH
Confidence 336789964 67999999986 46777664322 235577888999888888764422 23444444445
Q ss_pred HHHHHhhc----CCCCCCCCCCCCceEEEEecCcccccCCCC---HHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--
Q 014603 328 ICCDRLKE----IPCITCPKKPEGSMFVMVKLNYSLLEGINS---DMEFALKLAKEESVIVLPGITVGLKDWLRITFA-- 398 (422)
Q Consensus 328 ~l~~~L~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~---~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~-- 398 (422)
++++.|++ +|.+. . ...-|.++.+.+.........+ ...+...+ .++||++.+.. .+.+|++++
T Consensus 338 ~l~~~L~~l~~~~~~v~-~-vrG~Gl~~gi~l~~~~~~~~~~~~~~~~~~~~~-~~~Gv~~~~~~----~~~lr~~p~l~ 410 (445)
T PRK08593 338 YARKRFDQWVSKYNFVG-D-VRGYGLSIGIDIVSDKKLKTRDNEAALKICNYC-FEHGVVIIAVA----GNVLRFQPPLV 410 (445)
T ss_pred HHHHHHHHHHhcCCcEE-E-EeccceEEEEEEecCCCcCCCcHHHHHHHHHHH-HHCCeEEeccC----CCEEEEECCCc
Confidence 55555543 43222 1 2333556556553210000001 23344444 56799997632 368999987
Q ss_pred cChHHHHHHHHHHHHHHHHhcc
Q 014603 399 VEPSALEDGLGRMKAFYDRHAK 420 (422)
Q Consensus 399 ~~~~~l~~~~~~l~~~~~~~~~ 420 (422)
+++++++++++++.++++++.+
T Consensus 411 ~t~~~id~~~~~l~~~l~~~~~ 432 (445)
T PRK08593 411 ITYEQLDTALNTIEQAFTALEA 432 (445)
T ss_pred cCHHHHHHHHHHHHHHHHHHhc
Confidence 7899999999999999987644
No 273
>PRK05965 hypothetical protein; Provisional
Probab=99.89 E-value=2.4e-20 Score=179.12 Aligned_cols=350 Identities=15% Similarity=0.104 Sum_probs=216.3
Q ss_pred cCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHH
Q 014603 42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ 121 (422)
Q Consensus 42 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 121 (422)
.+|+.+|||..|......+ ..+|++.+++.+++.+.... ........+.+..+++.|.+.. +.+.+.++|+++|++
T Consensus 43 ~dG~~ylD~~~g~~~~~lG-h~~p~i~~Ai~~q~~~~~~~-~~~~~~~~~~~~~lae~L~~~~--p~~~~~v~f~~sGSE 118 (459)
T PRK05965 43 ASGHQLLDAFAGLWCVNVG-YGQESIVEAAAEQMRELPYA-TGYFHFGSEPAIRLAAKLAERA--PGSLNHVYFTLGGSD 118 (459)
T ss_pred CCCCEEEECcccHHhccCC-CCCHHHHHHHHHHHHhcCCc-ccccccCCHHHHHHHHHHHhhC--CCCcCEEEEeCChhH
Confidence 4689999998886543233 35799999999999763210 0000111233344555554432 223468999999999
Q ss_pred HHHHHHHHhcC-------C-CCEEEecCCCccchHHHHhhC-CC------------eEEEeeccCC--CCcccC------
Q 014603 122 AIEVILTVLAR-------P-GANILLPRPGFPYYEARATHS-HL------------EVRHFDLLPA--KGWEVD------ 172 (422)
Q Consensus 122 a~~~~~~~l~~-------~-gd~Vl~~~~~~~~~~~~~~~~-g~------------~~~~~~~~~~--~~~~~d------ 172 (422)
|++.+++.... + ..+|+....+||+....+... +. .+..++.... ..+.-|
T Consensus 119 Ave~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (459)
T PRK05965 119 AVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIA 198 (459)
T ss_pred HHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcccccccCCChHHHHH
Confidence 99999876431 2 257999999999875432221 11 0112221100 001112
Q ss_pred --HHHHHHhhcC---CceEEEEeCC-CCCccc-ccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCC
Q 014603 173 --LDAVEALADE---NTVALVIINP-GNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIV 245 (422)
Q Consensus 173 --~~~l~~~~~~---~~~~i~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~ 245 (422)
++.+++.+.. +..+.+|..| +...|. .+|.+.++++.++|++||+++|.||++.++.++|... ....++..+
T Consensus 199 ~~~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~~-a~~~~gv~P 277 (459)
T PRK05965 199 ASVAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGPLF-ACEAEGVVP 277 (459)
T ss_pred HHHHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCchhh-hHhhcCCCC
Confidence 2456666642 4556667777 555666 5678889999999999999999999999988877542 333444444
Q ss_pred CeEEEecCccccCCCC-ceeEEEEeeCCCCcccchhHHHHHHhh--------hhhccCcchHHHHHHHHHHhhchHHHHH
Q 014603 246 PVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKSF--------LNISSDPATFIQGAVPQILEKTEEEFFS 316 (422)
Q Consensus 246 ~~i~i~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~a~~~~l~~~~~~~~~ 316 (422)
+++++ +|.+ ..| +++|.++++ +++++.+... ...+.+.++++++++.+.|+...++.
T Consensus 278 Div~~---gKgl-~gG~~Pi~av~~~--------~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~l~~~~-- 343 (459)
T PRK05965 278 DLMTV---AKGL-TSGYVPMGAVLMS--------DHVYQGIADGAGAAAPVGHGYTYSAHPVSAAVGLEVLRLYHEGG-- 343 (459)
T ss_pred CeEEe---chhh-ccCCcceeEEEEc--------HHHHHHHhccccccccccccCCCCCCHHHHHHHHHHHHHHHhcc--
Confidence 44444 6995 567 599999986 4677766431 22355788999999999988654322
Q ss_pred HHHHHHHHHHHHHHHHhhc---CCCCCCCCCCCCceEEEEecCccc-c-cCCC----CHHHHHHHHHHhcCeEEecCCCC
Q 014603 317 KITDILRETADICCDRLKE---IPCITCPKKPEGSMFVMVKLNYSL-L-EGIN----SDMEFALKLAKEESVIVLPGITV 387 (422)
Q Consensus 317 ~~~~~~~~~~~~l~~~L~~---~~~~~~~~~~~~g~~~~~~~~~~~-~-~~~~----~~~~~~~~l~~~~gi~v~~g~~~ 387 (422)
..++.++.-+++.+.|++ .|.+. - ...-|.++.+.+.... . .... ....+.. .+.++|+++.+..
T Consensus 344 -l~~~~~~~g~~l~~~l~~l~~~~~v~-~-vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~-~~~~~Gll~~~~g-- 417 (459)
T PRK05965 344 -LLANGQKAGPRFAAGLDALRAHPLVG-D-VRGRGLLGALELVADKATKTPFDAALDPADRIFD-RAYANGLVFRAFG-- 417 (459)
T ss_pred -HHHHHHHHHHHHHHHHHhhccCCCEE-E-EeecceEEEEEEeccccccCCCCchhHHHHHHHH-HHHhCCeEEEecC--
Confidence 333444555555555554 33222 1 2334666667663211 0 0000 0223333 3466799997632
Q ss_pred CCCCeEEEEec--cChHHHHHHHHHHHHHHHHh
Q 014603 388 GLKDWLRITFA--VEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 388 ~~~~~iRis~~--~~~~~l~~~~~~l~~~~~~~ 418 (422)
.+.+|+.+. .++++++++++++.++++++
T Consensus 418 --~~~i~~~PpL~it~~ei~~~~~~l~~~l~~~ 448 (459)
T PRK05965 418 --DGVLGFAPALCCTEGEFDLIFERTRKTLDDV 448 (459)
T ss_pred --CcEEEEECCCcCCHHHHHHHHHHHHHHHHHH
Confidence 467899987 78999999999999999875
No 274
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.89 E-value=9.5e-20 Score=166.09 Aligned_cols=310 Identities=21% Similarity=0.252 Sum_probs=212.9
Q ss_pred cHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHh-cCCCCEEEecCC
Q 014603 64 ASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVL-ARPGANILLPRP 142 (422)
Q Consensus 64 ~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l-~~~gd~Vl~~~~ 142 (422)
..+..+++.+.+.++.... ++ ...++++++++|+ .....+.++++|.|+.+++.++ .++||+|++++.
T Consensus 14 ~~~e~~~v~~vl~sg~i~~-G~--~v~~FE~~~ae~~--------G~k~ava~~sgT~AL~laL~al~ig~GDeVI~ps~ 82 (374)
T COG0399 14 GEEELAAVQEVLKSGWLTG-GP--FVRRFEQAFAEYL--------GVKYAVAVSSGTAALHLALLALAIGPGDEVIVPSF 82 (374)
T ss_pred chHHHHHHHHHHHcCCeec-Ch--HHHHHHHHHHHHh--------CCCeEEEecChHHHHHHHHHhcCCCCCCEEEecCC
Confidence 3567788888888766544 43 4689999999999 4578999999999999999966 589999999999
Q ss_pred CccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEc
Q 014603 143 GFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIAD 222 (422)
Q Consensus 143 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D 222 (422)
+|..........|++++.+.+++ +.+.+|++.+|+.+++++++|+.++- .|.. .++++|.++|++||++||+|
T Consensus 83 TfvATan~i~~~Ga~PVFvDid~-~T~nid~~~ie~aIt~~tKAIipVhl---~G~~---~dm~~i~~la~~~~l~vIED 155 (374)
T COG0399 83 TFVATANAVLLVGAKPVFVDIDP-DTLNIDPDLIEAAITPRTKAIIPVHL---AGQP---CDMDAIMALAKRHGLPVIED 155 (374)
T ss_pred chHHHHHHHHHcCCeEEEEecCC-cccCCCHHHHHHHcccCCeEEEEehh---ccCC---CCHHHHHHHHHHcCCeEEEE
Confidence 99999999999999999999986 46789999999999999999986654 4444 37888899999999999999
Q ss_pred ccccccc-cCCCCCCCccccCCCCCeEEEecCc--cccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhhhccC-----
Q 014603 223 EVYDHLA-FGNTPFVPMGVFGSIVPVLTLGSIS--KRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSD----- 294 (422)
Q Consensus 223 ~~~~~~~-~~~~~~~~~~~~~~~~~~i~i~s~s--K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 294 (422)
.+++... |.|+. +..++. +.++||. |.+... --|.+++++ +++.++++......-.
T Consensus 156 aAqa~Ga~y~gk~---vGt~Gd----~~~fSF~~~K~ittg--EGGav~tnd-------~ela~k~~~lr~hG~~~~~~~ 219 (374)
T COG0399 156 AAQAHGATYKGKK---VGSFGD----IGAFSFHATKNLTTG--EGGAVVTND-------EELAEKARSLRNHGLSRDAVF 219 (374)
T ss_pred cchhccCeecCcc---cccccc----eEEEEecCCCCcccc--CceEEEeCC-------HHHHHHHHHHHHhCcCCCccc
Confidence 9998643 34442 333332 4555554 775433 348888876 6787777665432111
Q ss_pred ------------cchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceE----EEEecCcc
Q 014603 295 ------------PATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMF----VMVKLNYS 358 (422)
Q Consensus 295 ------------~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~----~~~~~~~~ 358 (422)
.+.+.++.+..-| +.+++..++-++..+.+.+.|++++++.....+.+... +.+.++..
T Consensus 220 ~y~~~~~G~N~rm~~iqAAigl~QL-----~~l~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~~~~~i~~~~~ 294 (374)
T COG0399 220 KYLHEELGYNYRLTEIQAAIGLAQL-----ERLDEINERRREIAQIYAEALKGLPGITLPPEPDGAVHAWHLYTILVDEE 294 (374)
T ss_pred cceeeecccccCHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCceeeeeeeEEEecCC
Confidence 1111222222223 34677777777888888899998876654434443322 22233321
Q ss_pred cccCCCCHHHHHHHHHHhcCeE----EecCCCC--------C---C--------CCeEEEEec--cChHHHHHHHHHHHH
Q 014603 359 LLEGINSDMEFALKLAKEESVI----VLPGITV--------G---L--------KDWLRITFA--VEPSALEDGLGRMKA 413 (422)
Q Consensus 359 ~~~~~~~~~~~~~~l~~~~gi~----v~~g~~~--------~---~--------~~~iRis~~--~~~~~l~~~~~~l~~ 413 (422)
..+-..+ ...+++.||. ..|-+.. . . ...+.+-+. .+++++++.++.|++
T Consensus 295 ----~~~R~~l-~~~L~~~gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP~~p~l~~~~~~~V~~~l~~ 369 (374)
T COG0399 295 ----GISRDAL-MESLKEAGVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSERILSLPLHPNLSEEDVDRVIEALKE 369 (374)
T ss_pred ----CCCHHHH-HHHHHhCCCCceEEeeccccchhhhcccccccCCCchHHHHhhCeEEccCCCCCCHHHHHHHHHHHHH
Confidence 1123444 4445776544 3442211 0 0 244555554 678999999999998
Q ss_pred HHHH
Q 014603 414 FYDR 417 (422)
Q Consensus 414 ~~~~ 417 (422)
++.+
T Consensus 370 ~~~~ 373 (374)
T COG0399 370 VLGS 373 (374)
T ss_pred Hhcc
Confidence 8753
No 275
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.89 E-value=4.2e-20 Score=172.19 Aligned_cols=220 Identities=12% Similarity=0.130 Sum_probs=165.7
Q ss_pred CCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHH----hhCCCeEEEee
Q 014603 87 VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARA----THSHLEVRHFD 162 (422)
Q Consensus 87 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~----~~~g~~~~~~~ 162 (422)
+....|++.++++- ..+..++++||++|++.++.+++++||+|+++...|.++...+ +..|+++..++
T Consensus 62 Pt~~~le~~la~LE--------g~~~a~~~~SGmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~vd 133 (395)
T PRK08114 62 LTHFSLQEAMCELE--------GGAGCALYPCGAAAVANAILAFVEQGDHVLMTGTAYEPTQDFCSKILSKLGVTTTWFD 133 (395)
T ss_pred hhHHHHHHHHHHHh--------CCCeEEEEhHHHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEEC
Confidence 34567788888764 3457888888999999999999999999999999997765543 56788887765
Q ss_pred ccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcC--cEEEEcccccccccCCCCCCCccc
Q 014603 163 LLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLG--IMVIADEVYDHLAFGNTPFVPMGV 240 (422)
Q Consensus 163 ~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~--~~li~D~~~~~~~~~~~~~~~~~~ 240 (422)
. .|.+.+++.++++++++++.+|+||+|.+ .++++|+++|+++| +++++|.+++. +.. .....
T Consensus 134 ~-------~d~~~l~~~l~~~TrlV~~EtpsNp~~~v---~DI~~Ia~ia~~~g~g~~lvVDnT~a~----p~~-~~pl~ 198 (395)
T PRK08114 134 P-------LIGADIAKLIQPNTKVVFLESPGSITMEV---HDVPAIVAAVRSVNPDAVIMIDNTWAA----GVL-FKALD 198 (395)
T ss_pred C-------CCHHHHHHhcCCCceEEEEECCCCCCCEe---ecHHHHHHHHHHhCCCCEEEEECCCcc----ccc-cCHHH
Confidence 2 36788999999899999999999999999 57899999999984 99999999975 222 23334
Q ss_pred cCCCCCeEEEecCccccCCCC-ceeEEEEeeCCCCcccchhHHHHHHhhhh-hccCcchHHHHHHHHHHhhchHHHHHHH
Q 014603 241 FGSIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQGAVPQILEKTEEEFFSKI 318 (422)
Q Consensus 241 ~~~~~~~i~i~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~ 318 (422)
++.| +++.|.+|.+++++ .-.|.++.+ ++..+.+..... .....++...+.+..-|+. +.-+
T Consensus 199 ~GaD---ivv~S~tKyl~Ghsdv~~G~v~~~--------~~~~~~l~~~~~~~G~~~~p~~a~l~~rgl~T-----L~lR 262 (395)
T PRK08114 199 FGID---ISIQAGTKYLVGHSDAMIGTAVAN--------ARCWEQLRENSYLMGQMVDADTAYMTSRGLRT-----LGVR 262 (395)
T ss_pred cCCc---EEEEcCcccccCCCcceeEEEEcC--------HHHHHHHHHHHHhccCCCCHHHHHHHHcCCCc-----HHHH
Confidence 5555 99999999887765 567766553 344454543332 2335666777766666665 6677
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 014603 319 TDILRETADICCDRLKEIPCITCPKKP 345 (422)
Q Consensus 319 ~~~~~~~~~~l~~~L~~~~~~~~~~~~ 345 (422)
.++..++...+.+.|+++|.+.-+.+|
T Consensus 263 ~~~~~~na~~va~~L~~hp~V~~V~yP 289 (395)
T PRK08114 263 LRQHEESSLKVAEWLAEHPEVARVNHP 289 (395)
T ss_pred HHHHHHHHHHHHHHHHcCCCEeEEECC
Confidence 788889999999999998876534444
No 276
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.89 E-value=7.1e-20 Score=173.28 Aligned_cols=338 Identities=14% Similarity=0.079 Sum_probs=217.1
Q ss_pred CCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEE--ecCHHHHHHHHHHHhc--------
Q 014603 62 RTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYL--TLGCTQAIEVILTVLA-------- 131 (422)
Q Consensus 62 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~--~~g~~~a~~~~~~~l~-------- 131 (422)
++.|++.+.|...+.....+... .....++++.+.+++.+.+|.+-..+++.+ |+|||+|++.++.+..
T Consensus 52 ~~~p~~~~~~~~~l~~~~~np~s-~~~~~~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~ 130 (431)
T TIGR01788 52 WMEPEARKLMDETINKNMIDKDE-YPQTAEIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRME 130 (431)
T ss_pred CCCHHHHHHHHHHHhcCCCCccc-CccHHHHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHH
Confidence 45677889998888643222111 222336666666666655553211134544 8999999998876542
Q ss_pred CCC-----CEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHH
Q 014603 132 RPG-----ANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQ 206 (422)
Q Consensus 132 ~~g-----d~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~ 206 (422)
..| ..|+++...|+++...++..|++++.+++++ +++.+|++.|++.+++++.+++++..+|.||.+ ++++
T Consensus 131 ~~g~~~~~~~ii~s~~~H~sv~ka~~~lg~~v~~i~~d~-~~~~vd~~~L~~~i~~~t~lV~~t~g~t~tG~i---dpi~ 206 (431)
T TIGR01788 131 AAGKPTDKPNLVMGSNVQVCWEKFARYFDVELREVPMDP-GRYVIDPEQVVEAVDENTIGVVCILGTTYTGEY---EDVK 206 (431)
T ss_pred hcCCCCCCcEEEEcCcchHHHHHHHHHcCceeEEEecCC-CceeeCHHHHHHHHhhCCeEEEEEeCCCCCccc---CCHH
Confidence 111 3799999999999999999999999999865 345789999999999899999999999999999 6788
Q ss_pred HHHHHHHHc------CcEEEEccccccccc---CCCCCCCccccCCCCCeEEEecCcccc-CCCCceeEEEEeeCCCCcc
Q 014603 207 KIAETAKKL------GIMVIADEVYDHLAF---GNTPFVPMGVFGSIVPVLTLGSISKRW-IVPGWRLGWLVTSDPNGIL 276 (422)
Q Consensus 207 ~i~~~~~~~------~~~li~D~~~~~~~~---~~~~~~~~~~~~~~~~~i~i~s~sK~~-~~~G~r~G~~~~~~~~~~~ 276 (422)
+|+++|+++ |+++++|.+|+++.. .++....+..... ..+..|.+|++ +..| +|+++.+++.
T Consensus 207 ~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~~~~~---DSis~s~HK~~~~P~g--~G~l~~r~~~--- 278 (431)
T TIGR01788 207 ALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFRLPRV---KSINVSGHKYGLVYPG--VGWVIWRDEE--- 278 (431)
T ss_pred HHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhcCCCCc---eEEEECchhccCCCCC--cEEEEEeChH---
Confidence 888899999 999999999985331 1222222221111 25667999984 4445 8999887531
Q ss_pred cchhHHHHHHh---hhh-----hccCcchH--HHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC-C
Q 014603 277 QDSGIVDSIKS---FLN-----ISSDPATF--IQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKK-P 345 (422)
Q Consensus 277 ~~~~~~~~~~~---~~~-----~~~~~~~~--~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~ 345 (422)
.+.+.+.. +.. .+...+.. .....-..|.......+.+..++..++.+++.+.|++.|+++++.. |
T Consensus 279 ---~l~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~~~~ 355 (431)
T TIGR01788 279 ---ALPEELIFHVNYLGGDEPTFTLNFSRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEIISDGS 355 (431)
T ss_pred ---HcchhheecccccCCCCCCcceecCchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeCCC
Confidence 11122111 000 00111111 1111122233333577888999999999999999999988885533 3
Q ss_pred CCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCC---CCCeEEEEec--cChHHHHHHHHHHHHHHHHh
Q 014603 346 EGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVG---LKDWLRITFA--VEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 346 ~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~---~~~~iRis~~--~~~~~l~~~~~~l~~~~~~~ 418 (422)
..+ .+.++++.... ...+..++.+.| .+.|+.+....... ..-.+|+++. .+.+.++.++..|+.++.++
T Consensus 356 ~~~-iV~Fr~~~~~~-~~~~~~~l~~~L-~~~G~~~~~~~~p~~~~~~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (431)
T TIGR01788 356 GIP-LVAFKLKDDAD-PGYTLYDLSHRL-RERGWIVPAYTLPKNAEDIVVMRIVVREGFSRDLAELLIEDIEAALAYL 430 (431)
T ss_pred Cce-EEEEEeCCCCC-CCcCHHHHHHHH-HHCCCcccCCCCCCccCCeEEEEEEecCCCCHHHHHHHHHHHHHHHHhh
Confidence 333 44445542110 011455666665 56798753322211 1346899985 67889999999999988654
No 277
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.89 E-value=3.1e-20 Score=173.24 Aligned_cols=313 Identities=15% Similarity=0.121 Sum_probs=213.8
Q ss_pred CCcHHHHHHHHHHhhCC---C-----CCCCCC--CCCCHHHHHHHHHHHhhcCCCCC-CCCCE-EEecCHHHHHHHHHHH
Q 014603 62 RTASVAVDAIVHSVRSA---R-----FNCYSS--TVGILPARRAIADYLNRDLPYKL-SPDDV-YLTLGCTQAIEVILTV 129 (422)
Q Consensus 62 ~~~~~v~~a~~~~~~~~---~-----~~~y~~--~~g~~~lr~~ia~~l~~~~~~~~-~~~~i-~~~~g~~~a~~~~~~~ 129 (422)
+.|+.|++++.+.+.+. . .....+ ..-+.+.++.++++++ . +..++ +++++|+.++++++..
T Consensus 13 ~~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~------~~~~~~v~~~~gsgt~~~Ea~~~n 86 (360)
T PRK05355 13 MLPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELLN------IPDNYKVLFLQGGASLQFAMVPMN 86 (360)
T ss_pred CCCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHhC------CCCCcEEEEEcCCchHHHHHHHHh
Confidence 67899999999886321 0 011111 0234566667777663 2 22345 5557789999999999
Q ss_pred hcCCCCEEEecCCCccc--hHHHHhhCCCeEEEeeccCCCCcccCHHHHHH-hhcCCceEEEEeCCCCCcccccCHHHHH
Q 014603 130 LARPGANILLPRPGFPY--YEARATHSHLEVRHFDLLPAKGWEVDLDAVEA-LADENTVALVIINPGNPCGNVYTYQHLQ 206 (422)
Q Consensus 130 l~~~gd~Vl~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~-~~~~~~~~i~i~~p~nptG~~~~~~~l~ 206 (422)
++.+|+++++...+.++ +...++..|.. ..+...+..+ ..+..++++ .++++++++.+++..+.||+..+ ++.
T Consensus 87 l~~~g~~~l~i~~G~fg~r~~~~a~~~g~~-~~~~~~~~~g-~~~~~~~~~~~l~~~~~~V~~th~eTstGv~~~--~i~ 162 (360)
T PRK05355 87 LLGGGKKADYVDTGSWSKKAIKEAKKYGEV-NVAASSEDDG-FTYIPPLDEWQLSDDAAYVHYTSNETIDGTEFH--ELP 162 (360)
T ss_pred cCCCCCeEEEEECCHHHHHHHHHHHHhCCc-eEEecccccC-CCCCCChhhccCCCCCCEEEEccCCCcceEecC--ccc
Confidence 99999998887766644 46677788854 4454432122 234444444 67778899999999999999974 455
Q ss_pred HHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHH
Q 014603 207 KIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIK 286 (422)
Q Consensus 207 ~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~ 286 (422)
+| +|+++|+|.+++. |..+.++..++ ++++|.+|.||.+| +|++++++ +..+++.
T Consensus 163 ~i------~g~l~vVDavss~----g~~~idv~~~d-----~~~~ssqK~lgP~G--lg~l~~s~--------~~l~~~~ 217 (360)
T PRK05355 163 DT------GDVPLVADMSSDI----LSRPIDVSKFG-----LIYAGAQKNIGPAG--LTIVIVRE--------DLLGRAL 217 (360)
T ss_pred cc------CCCcEEEEcCccc----cCccCCHHHcc-----EEEEeccccccCCc--eEEEEECH--------HHHhhcc
Confidence 55 7999999999987 44444554432 88899999998777 78888863 3333332
Q ss_pred h-----------h--hhhccCcchHHHHHHHHHHhhchHH-HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC--CCceE
Q 014603 287 S-----------F--LNISSDPATFIQGAVPQILEKTEEE-FFSKITDILRETADICCDRLKEIPCITCPKKP--EGSMF 350 (422)
Q Consensus 287 ~-----------~--~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~--~~g~~ 350 (422)
. . ....++|+....+++.++|+...+. .++.+.++.+++.+.+++.|++++.+.....+ ..+..
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~v 297 (360)
T PRK05355 218 PSIPSMLDYKTHADNDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDSSDFYRNPVAPEDRSRMN 297 (360)
T ss_pred cCCChHHHHHHHHhcCCccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCChhhcCCcE
Confidence 2 0 1124688888999999999876666 79999999999999999999998633322111 22234
Q ss_pred EEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHHHHHHHHH
Q 014603 351 VMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGRMKAFYDR 417 (422)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~l~~~~~~ 417 (422)
..+.++.. ....++... +.++|+.+.+|.. ..+.+|+|+. ++.+||+++++.|++++++
T Consensus 298 ~sf~~~~~-----~~~~~~~~~-~~~~Gi~~~~~~~--~~g~vRiS~~~~nt~eei~~l~~~l~~~~~~ 358 (360)
T PRK05355 298 VPFTLADE-----ELDKKFLAE-AKAAGLVGLKGHR--SVGGMRASIYNAMPLEGVQALVDFMKEFERR 358 (360)
T ss_pred EEEEcCCh-----HHHHHHHHH-HHHCCCcccCCCC--ccCcEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 44555532 122344344 4567999866653 3578999997 7899999999999998765
No 278
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.89 E-value=7.4e-20 Score=172.17 Aligned_cols=342 Identities=11% Similarity=0.044 Sum_probs=221.8
Q ss_pred CCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCC------CCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecC
Q 014603 45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNC------YSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLG 118 (422)
Q Consensus 45 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~------y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g 118 (422)
.+.|+|--.. | -.++.+++++...+.+....+ |+....+.+++....+...+.++ .+..+|-.- |
T Consensus 49 ~~~l~LiasE-----N-~~s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ra~~lf~--a~~anvqp~-S 119 (493)
T PRK13580 49 RSSLKLIASE-----N-YSSLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAEHAKELFG--AEHAYVQPH-S 119 (493)
T ss_pred hcCceEeccc-----c-cCCHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHHHHHHHhC--CCcccccCC-C
Confidence 5667774443 2 356889898887776543323 33344566777666666666554 333344444 5
Q ss_pred HHHHHHHHHHHhcCC-------------------------------CCEEEecCCCccchHH---HHhhCC--CeEEEee
Q 014603 119 CTQAIEVILTVLARP-------------------------------GANILLPRPGFPYYEA---RATHSH--LEVRHFD 162 (422)
Q Consensus 119 ~~~a~~~~~~~l~~~-------------------------------gd~Vl~~~~~~~~~~~---~~~~~g--~~~~~~~ 162 (422)
|+.|+.+++.++++| ||+|+..++.+.+... .....+ ..++.++
T Consensus 120 g~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg~~~n~~~~~~~~~~y~ 199 (493)
T PRK13580 120 GADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHGFRPNISGKMFHQRSYG 199 (493)
T ss_pred cHHHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecCcccchhhheeeeEecc
Confidence 577888888888876 7999988766643311 111122 4566677
Q ss_pred ccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCC-Ccccc
Q 014603 163 LLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFV-PMGVF 241 (422)
Q Consensus 163 ~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~-~~~~~ 241 (422)
++++ ...+|.+.+++.+.++++.++++..+|-++ .. ++++|.++|+++|+++++|++|+.....+.... .....
T Consensus 200 vd~~-~g~iD~d~l~~~~~~~~plvii~g~S~~~~-~~---dl~~i~eia~~~gA~L~VD~AH~~Gligg~~~~~~~~~~ 274 (493)
T PRK13580 200 VDPD-TGLLDYDEIAALAREFKPLILVAGYSAYPR-RV---NFAKLREIADEVGAVLMVDMAHFAGLVAGKVFTGDEDPV 274 (493)
T ss_pred cCcc-cCccCHHHHHHHHhhcCCEEEEeCccccCC-Cc---CHHHHHHHHHHcCCEEEEECchhhceeccccchhhcCCC
Confidence 6643 356999999999998999999998887655 42 688889999999999999999987555432211 00111
Q ss_pred CCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhh-hhccCcchHHHHHHHHHHhhchHHHHHHHHH
Q 014603 242 GSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQGAVPQILEKTEEEFFSKITD 320 (422)
Q Consensus 242 ~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 320 (422)
. ...++++|++|++. |.+.|+++++ +++.+.+.... ...+++.+...++...++.+..+....+.++
T Consensus 275 ~--~~D~vtgT~hKaL~--GP~GG~I~~~--------~~l~~~L~~a~P~i~gg~l~p~iAA~avAl~e~~~~ef~~y~~ 342 (493)
T PRK13580 275 P--HADIVTTTTHKTLR--GPRGGLVLAK--------KEYADAVDKGCPLVLGGPLPHVMAAKAVALAEARTPEFQKYAQ 342 (493)
T ss_pred C--CCcEEEeCChhhcc--CCCeEEEEec--------HHHHHHHhhCCCcccCCCccHHHHHHHHHHHHHhCccHHHHHH
Confidence 1 12288999999863 3334888885 45667664332 2234554455555555555432223366788
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC------CCeEE
Q 014603 321 ILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL------KDWLR 394 (422)
Q Consensus 321 ~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~------~~~iR 394 (422)
++.++.+.|.+.|++. |+.++........+++.+.... .....+...|.+.||.+.+...+.. ...+|
T Consensus 343 ~l~~Na~~La~~L~~~-G~~vv~ggTdshIV~V~lg~~~-----~~g~~a~~~L~e~GI~vn~i~~Ptvp~g~~~~srLR 416 (493)
T PRK13580 343 QVVDNARALAEGFLKR-GARLVTGGTDNHLVLIDVTSFG-----LTGRQAESALLDAGIVTNRNSIPSDPNGAWYTSGIR 416 (493)
T ss_pred HHHHHHHHHHHHHHhc-CCCccCCCCCCCEEEEEeCCHH-----HHHHHHHHHHHHCCeEEccccCCCCCCCCCCCceEE
Confidence 9999999999999987 7763322233456677775321 1333455566788999987655433 45799
Q ss_pred EEec--c----ChHHHHHHHHHHHHHHHHh
Q 014603 395 ITFA--V----EPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 395 is~~--~----~~~~l~~~~~~l~~~~~~~ 418 (422)
|++. + ++++++++++.|.++++..
T Consensus 417 Ig~~A~ttrg~teedi~~iad~l~~~l~~~ 446 (493)
T PRK13580 417 LGTPALTTLGMGSDEMDEVAELIVKVLSNT 446 (493)
T ss_pred eccchhhhcCCCHHHHHHHHHHHHHHHHhh
Confidence 9986 2 5799999999999988653
No 279
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.89 E-value=6.6e-20 Score=175.95 Aligned_cols=354 Identities=15% Similarity=0.071 Sum_probs=219.6
Q ss_pred cCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCC---CCCCCEEEecC
Q 014603 42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYK---LSPDDVYLTLG 118 (422)
Q Consensus 42 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~---~~~~~i~~~~g 118 (422)
.+|+.+|||..|......+ ..+|++.+++.+++..-.. ........+.+..+++.+....+.. .+.+.++++++
T Consensus 61 ~dG~~ylD~~~g~~~~~lG-h~~p~i~~Ai~~q~~~l~~--~~~~~~~~~~~~~lae~L~~~~p~~~~~~~~~~v~f~~s 137 (472)
T PRK08742 61 HDGRRYLDAVSSWWTNLFG-HAEPRIGAAIAAQAGELEQ--VMLAGFTHEPAVQLAEQLLAIAPRQDGRAPLSKVFYADN 137 (472)
T ss_pred CCCCEEEEcCccHHhccCC-CCCHHHHHHHHHHHHhCCC--ccccccCCHHHHHHHHHHHHhCCCcccCCCCCEEEEeCC
Confidence 4688999999886543233 4578999999999864211 1111111234455565555432211 12358999999
Q ss_pred HHHHHHHHHHHhcC-------C-CCEEEecCCCccchHHHHhhCCCe-------------EEEeeccCCC--Ccc-----
Q 014603 119 CTQAIEVILTVLAR-------P-GANILLPRPGFPYYEARATHSHLE-------------VRHFDLLPAK--GWE----- 170 (422)
Q Consensus 119 ~~~a~~~~~~~l~~-------~-gd~Vl~~~~~~~~~~~~~~~~g~~-------------~~~~~~~~~~--~~~----- 170 (422)
|++|++.+++.... + ..+|+....+||+....+...... +..+|..... .++
T Consensus 138 GSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~ 217 (472)
T PRK08742 138 GSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAED 217 (472)
T ss_pred chHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCCccccccCCCHHH
Confidence 99999999886521 2 268999999999876444432211 1112211000 001
Q ss_pred ---cCHHHHHHhhc--CCceEEEEeCC--CCCccc-ccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccC
Q 014603 171 ---VDLDAVEALAD--ENTVALVIINP--GNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG 242 (422)
Q Consensus 171 ---~d~~~l~~~~~--~~~~~i~i~~p--~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~ 242 (422)
.+++.+++.+. .+..+.+|..| +...|. .+|++.++++.++|++||+++|.||++.++.++|... ....++
T Consensus 218 ~~~~~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRtG~~~-a~e~~g 296 (472)
T PRK08742 218 YALQAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTGTLF-ACEQAG 296 (472)
T ss_pred HHHHHHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccch-HHHhcC
Confidence 12455666653 24566677777 456676 5678889999999999999999999999988877543 233344
Q ss_pred CCCCeEEEecCccccCCCC-ceeEEEEeeCCCCcccchhHHHHHHhh-------hhhccCcchHHHHHHHHHHhhchHHH
Q 014603 243 SIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKSF-------LNISSDPATFIQGAVPQILEKTEEEF 314 (422)
Q Consensus 243 ~~~~~i~i~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~a~~~~l~~~~~~~ 314 (422)
..++++++ +|.+ ..| +++|.++++ +++.+.+... ...+.+.++++++++.+.|+...++.
T Consensus 297 v~PDiv~~---gKgl-~gG~~Plaav~~~--------~ei~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~i~~~~ 364 (472)
T PRK08742 297 VMPDLLCL---SKGL-TGGFLPLSAVLAT--------QQLYDAFLDDSRERAFLHSHSYTGNPLACAAALATLDIFADDD 364 (472)
T ss_pred CCCCEEEE---cccc-cCCCCCcceeecc--------HHHHHHhhccCccCccCcCCCCCccHHHHHHHHHHHHHHHHCC
Confidence 44444544 6995 567 489999986 4676666421 22345678999999999998755444
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccc-c-CCCC----HHHHHHHHHHhcCeEEecCCCCC
Q 014603 315 FSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLL-E-GINS----DMEFALKLAKEESVIVLPGITVG 388 (422)
Q Consensus 315 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~-~-~~~~----~~~~~~~l~~~~gi~v~~g~~~~ 388 (422)
+.+..++..+....+.+.++++|.+. . ...-|.++.+.+..... . .... ...+... +.++||++.+.
T Consensus 365 l~~~~~~~g~~l~~~~~~~~~~~~i~-d-vRG~Gl~~giel~~~~~~~~~~~~~~~~~~~~~~~-~~~~Gll~~~~---- 437 (472)
T PRK08742 365 VIARNQPTAARMTQLAAQIGEHPHVA-D-VRQAGMVVAFELTRGGNKRTPFPPAARVGLHAYRA-ALARGVVLRPL---- 437 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCee-e-EeccceEEEEEeccCccccccCCchhHHHHHHHHH-HHHCCeEEEec----
Confidence 43333333333334444455555433 1 23447777777742110 0 0000 1233443 45679999873
Q ss_pred CCCeEEEEec--cChHHHHHHHHHHHHHHHHhc
Q 014603 389 LKDWLRITFA--VEPSALEDGLGRMKAFYDRHA 419 (422)
Q Consensus 389 ~~~~iRis~~--~~~~~l~~~~~~l~~~~~~~~ 419 (422)
.+.+|+.+. .+++++++++++|++++++.-
T Consensus 438 -g~vi~~~PpL~it~~ei~~~~~~l~~~l~~~~ 469 (472)
T PRK08742 438 -GDVLYWMPPYCVDEAQLALLADTTRHAIDEAV 469 (472)
T ss_pred -CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 268999998 789999999999999998753
No 280
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.89 E-value=1.4e-19 Score=173.02 Aligned_cols=351 Identities=17% Similarity=0.140 Sum_probs=212.7
Q ss_pred cCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHH
Q 014603 42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ 121 (422)
Q Consensus 42 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 121 (422)
.+|+.++||..|...... -..+|.+.+++.+++.+... ........+.+..+++.|.+..+ ...+.++++++|++
T Consensus 43 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~ql~~l~~--~~~~~~~~~~~~~la~~l~~~~p--~~~~~v~f~~sGse 117 (442)
T PRK13360 43 HDGRRVLDGTAGLWCVNA-GHGRPEIVEAVRAQAGELDY--APAFQMGHPKAFELANRIAEIAP--GGLNHVFFTNSGSE 117 (442)
T ss_pred CCCCEEEECchhHHHhcc-CCCCHHHHHHHHHHHHhCCC--cccCCcCCHHHHHHHHHHHHhCC--CCCCEEEEeCCcHH
Confidence 368999999888644322 24678999999999875211 11111112334445555544222 23468999999999
Q ss_pred HHHHHHHHhcC-------C-CCEEEecCCCccchHHHHhhC-C------------CeEEEeeccCC---CCccc------
Q 014603 122 AIEVILTVLAR-------P-GANILLPRPGFPYYEARATHS-H------------LEVRHFDLLPA---KGWEV------ 171 (422)
Q Consensus 122 a~~~~~~~l~~-------~-gd~Vl~~~~~~~~~~~~~~~~-g------------~~~~~~~~~~~---~~~~~------ 171 (422)
|++.+++.... + ..+|+....+||++...+... + ..+..+|.... ..+..
T Consensus 118 A~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 197 (442)
T PRK13360 118 SVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEHG 197 (442)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCChHHHH
Confidence 99999875431 2 258999999999875433211 1 01122222100 00111
Q ss_pred --CHHHHHHhhc---CCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCC
Q 014603 172 --DLDAVEALAD---ENTVALVIINP-GNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSI 244 (422)
Q Consensus 172 --d~~~l~~~~~---~~~~~i~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~ 244 (422)
..+.+++.+. .+..+.+++.| +...|.. +|.+.+++|.++|++||+++|+||++.++..+|... ....++..
T Consensus 198 ~~~~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~~~-a~~~~gv~ 276 (442)
T PRK13360 198 AELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAPF-AAQYFGVT 276 (442)
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccch-hhhhcCCC
Confidence 1346666663 24456667777 5556664 677889999999999999999999998877766542 22233333
Q ss_pred CCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhh--------hhhccCcchHHHHHHHHHHhhchHHHHH
Q 014603 245 VPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSF--------LNISSDPATFIQGAVPQILEKTEEEFFS 316 (422)
Q Consensus 245 ~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~a~~~~l~~~~~~~~~ 316 (422)
++++ +++|.++...+++|.++++ +++.+.+... ...+.+.++++.+++.+.|+...+.
T Consensus 277 PDiv---t~gK~l~gG~~P~gav~~~--------~~i~~~~~~~~~~~~~~~~~~T~~g~pl~~aaa~a~L~~l~~~--- 342 (442)
T PRK13360 277 PDLL---TCAKGLTNGAIPMGAVFVS--------SEIHDAFMQGPEAGIEFFHGYTYSGHPLACAAALATLDLYERE--- 342 (442)
T ss_pred Ccee---eeeeccccCccceEEEEEc--------HHHHHHhhcCCccccccccCCCCCCCHHHHHHHHHHHHHHHhC---
Confidence 3333 5689964433789998885 4676665431 2234567888999999888764322
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCCC-CCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEE
Q 014603 317 KITDILRETADICCDRLKEIPCITCPK-KPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRI 395 (422)
Q Consensus 317 ~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi 395 (422)
...++++++.+++.+.|+++.....+. ...-|.+..+.+............++...+ .++||++.++ .+.+|+
T Consensus 343 ~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl~~~~~l~~~~~~~~~~~~~~~~~l-~~~Gvl~~~~-----~~~lr~ 416 (442)
T PRK13360 343 GLLTRAARLAPYWEDALHSLRDAPHVIDIRNLGLVGAVELAPRDGKPGKRAYEVFLKC-FEKGLMIRYT-----GDILAL 416 (442)
T ss_pred CHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccceEEEEEEecCCCCcchhHHHHHHHH-HHCCcEEEec-----CCEEEE
Confidence 244555566666666666542111111 122244444455321100011234555554 5679999764 367999
Q ss_pred Eec--cChHHHHHHHHHHHHHHHHh
Q 014603 396 TFA--VEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 396 s~~--~~~~~l~~~~~~l~~~~~~~ 418 (422)
+++ +++++|++++++|.+++++.
T Consensus 417 ~Ppl~~t~~eid~~~~~l~~~l~~~ 441 (442)
T PRK13360 417 SPPLIIEEAQIDELFDILAQALKET 441 (442)
T ss_pred eCCCccCHHHHHHHHHHHHHHHHHh
Confidence 976 78999999999999998764
No 281
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.89 E-value=2.9e-20 Score=172.62 Aligned_cols=330 Identities=13% Similarity=0.119 Sum_probs=208.4
Q ss_pred cCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHH
Q 014603 42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ 121 (422)
Q Consensus 42 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 121 (422)
.+|+.++||..|......+ ..+|++.+++.+++.+... +.+. ...+.+..+++.+.+.. ..+.+++++++++
T Consensus 21 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~ql~~~~~--~~~~-~~~~~~~~la~~l~~~~----~~~~v~~~~SGse 92 (364)
T PRK04013 21 SQGRRYLDLIAGIGVNVLG-HNHPEWVEEMSEQLEKLVV--AGPM-FEHEEKEEMLEELSKWV----NYEYVYMGNSGTE 92 (364)
T ss_pred CCCCEEEEcccChhhccCC-CCCHHHHHHHHHHHHhcCC--ccCC-cCCHHHHHHHHHHHhhc----CCCEEEEeCchHH
Confidence 3689999998886443222 3568999999999986321 1111 11233334444443322 2358999999999
Q ss_pred HHHHHHHHhc-CCC-CEEEecCCCccchHHHHhhC-CCeEE---EeeccCC---CCcccCHHHHHHhhcCCceEEEEeCC
Q 014603 122 AIEVILTVLA-RPG-ANILLPRPGFPYYEARATHS-HLEVR---HFDLLPA---KGWEVDLDAVEALADENTVALVIINP 192 (422)
Q Consensus 122 a~~~~~~~l~-~~g-d~Vl~~~~~~~~~~~~~~~~-g~~~~---~~~~~~~---~~~~~d~~~l~~~~~~~~~~i~i~~p 192 (422)
|++.+++... ..| ++|+..+.+|++....+... +.... .-|..+. -.+ .|++.+++.+.+++.++++...
T Consensus 93 A~e~Alklar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~~-~d~~~l~~~i~~~~aAvivEpi 171 (364)
T PRK04013 93 AVEAALKFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIPF-NDVEAAKEAITKETAAVIFEPI 171 (364)
T ss_pred HHHHHHHHHHHHhCCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEecC-CCHHHHHHHhcCCcEEEEEcCC
Confidence 9999998653 234 89999999999875444331 11000 0010000 011 2678888888766666655544
Q ss_pred CCCccc-ccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeC
Q 014603 193 GNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD 271 (422)
Q Consensus 193 ~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~ 271 (422)
+...|. .++.+.++++.++|++||+++|+||++.++ ++|... ....++..+++++ ++|.++ .|+++|.++.+.
T Consensus 172 ~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~-RtG~~~-a~~~~gv~PDiv~---~gK~lg-gG~P~~a~~~~~ 245 (364)
T PRK04013 172 QGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGL-RTGKFL-AIEHYKVEPDIVT---MGKGIG-NGVPVSLTLTNF 245 (364)
T ss_pred cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcC-CCCchh-HHHhcCCCCCEEE---eccccc-CCceeEEEEecc
Confidence 555565 456788999999999999999999999987 666532 2333343344444 479964 579999998753
Q ss_pred CCCcccchhHHHHHHhhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEE
Q 014603 272 PNGILQDSGIVDSIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFV 351 (422)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~ 351 (422)
++.. .....+...++++++++.+.|+...++.+.+..+ +. +. .+.. +.+. . ...-|.++
T Consensus 246 --------~~~~---~~~~~T~~gnp~~~aaa~a~l~~i~~~~l~~~~~---~~---l~-~l~~-~~v~-~-vRG~Gl~~ 304 (364)
T PRK04013 246 --------DVER---GKHGSTFGGNPLACKAVAVTLRILRRERLVEKAG---EK---FI-EIKG-ERVV-T-TRGRGLMI 304 (364)
T ss_pred --------cccC---CCcCCCCCcCHHHHHHHHHHHHHHHhccHHHHHH---HH---HH-Hhcc-Ccce-e-eeeCcEEE
Confidence 2211 1233456788999999999998754333222222 21 22 2222 3222 1 23447787
Q ss_pred EEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHHHHHHHHHhc
Q 014603 352 MVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGRMKAFYDRHA 419 (422)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~l~~~~~~~~ 419 (422)
.+.+.. ....+... +.++|+++.+.. .+.+|+.++ .+++++++++++|++++++..
T Consensus 305 gve~~~-------~~~~i~~~-~~~~Gll~~~~g----~~vlr~~Ppl~it~~~i~~~~~~l~~~l~~~~ 362 (364)
T PRK04013 305 GIVLKK-------PVGKYVEE-LQNRGYLVHTAG----QRVIRLLPPLIISKDTMEEAKSAIEGVINDIL 362 (364)
T ss_pred EEEeCC-------cHHHHHHH-HHhCCcEEeeCC----CCEEEEeCCcccCHHHHHHHHHHHHHHHHHHh
Confidence 777753 23445444 456799997642 478999998 789999999999999997653
No 282
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.88 E-value=5.8e-20 Score=177.14 Aligned_cols=338 Identities=12% Similarity=0.071 Sum_probs=211.3
Q ss_pred CCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCC------CCCCHH----HHHHHHHHHhhcCCCCCCCCCEE
Q 014603 45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSS------TVGILP----ARRAIADYLNRDLPYKLSPDDVY 114 (422)
Q Consensus 45 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~------~~g~~~----lr~~ia~~l~~~~~~~~~~~~i~ 114 (422)
...|+|--.. + .++|.+++++...+.+.....++. ...... .|+.+++++ +.+++++.
T Consensus 34 ~~~l~l~~se-----n-~~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~lf------~a~~~~~~ 101 (452)
T PTZ00094 34 IEGLELIASE-----N-FTSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALEAF------GLDPEEWG 101 (452)
T ss_pred HcCeeEeccc-----c-cCCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHHHh------CCCcccce
Confidence 5678886654 2 456889999988876532112221 111222 345677777 34666776
Q ss_pred Ee---cCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhh--------CC--CeEEEeeccCCCCcccCHHHHHHhhc
Q 014603 115 LT---LGCTQAIEVILTVLARPGANILLPRPGFPYYEARATH--------SH--LEVRHFDLLPAKGWEVDLDAVEALAD 181 (422)
Q Consensus 115 ~~---~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~--------~g--~~~~~~~~~~~~~~~~d~~~l~~~~~ 181 (422)
++ +||++++..++.+++++||+|++....|.+....+.. .+ .++..+++++ ++.+|++.|++.++
T Consensus 102 ~~~~~~sgt~an~~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~--~g~id~~~L~~~l~ 179 (452)
T PTZ00094 102 VNVQPYSGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNE--KGLIDYDKLEELAK 179 (452)
T ss_pred eecCCCchHHHHHHHHHHhcCCCCEEEecccccCCcccccccccccccccceeeeeeeecccCC--CCCcCHHHHHHHHH
Confidence 66 7899999999999999999999988888665332211 11 2233444433 35689999999885
Q ss_pred C-CceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCC-CCCccccCCCCCeEEEecCccccCC
Q 014603 182 E-NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTP-FVPMGVFGSIVPVLTLGSISKRWIV 259 (422)
Q Consensus 182 ~-~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~-~~~~~~~~~~~~~i~i~s~sK~~~~ 259 (422)
+ +++.+++. ++.+|... ++++|.++|+++|+++++|++|+.....+.. ..++. +. .++++|++|++++
T Consensus 180 ~~~~~lvi~~--~s~~g~~~---di~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~~~~--~~---D~l~~S~hK~l~G 249 (452)
T PTZ00094 180 AFRPKLIIAG--ASAYPRDI---DYKRFREICDSVGAYLMADIAHTSGLVAAGVLPSPFP--YA---DVVTTTTHKSLRG 249 (452)
T ss_pred HhCCCEEEEe--CCCCCCcc---CHHHHHHHHHHcCCEEEEeccchhccccCCCCCCCCC--CC---cEEEcCCccCCCC
Confidence 4 55555543 33488874 5777788899999999999999874432211 11111 22 2889999998644
Q ss_pred CCceeEEEEeeCCCCcccchhHHHHHHhhh--hhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 014603 260 PGWRLGWLVTSDPNGILQDSGIVDSIKSFL--NISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIP 337 (422)
Q Consensus 260 ~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 337 (422)
|. .|++++++. .. +.+...+.... .+.++++....+++.++++.......++..+++.++.+++.+.|++.
T Consensus 250 P~--Gg~l~~~~~--~~--~~l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~~- 322 (452)
T PTZ00094 250 PR--SGLIFYRKK--VK--PDIENKINEAVFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALEKR- 322 (452)
T ss_pred CC--ceEEEEecc--cc--hHHHHhhccccCCCCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhC-
Confidence 33 477777531 11 11222221111 12235666677777777776434556778889999999999999886
Q ss_pred CCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEe-cCCCCCC----CCeEEEEec--cC----hHHHHH
Q 014603 338 CITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVL-PGITVGL----KDWLRITFA--VE----PSALED 406 (422)
Q Consensus 338 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~-~g~~~~~----~~~iRis~~--~~----~~~l~~ 406 (422)
++.+...........+.+... + .+..++ ..+++++||.+. ++..+.. ++++|++++ ++ ++|+++
T Consensus 323 g~~v~~~~~~~~~~~v~~~~~---~-~~~~~~-~~~L~~~gI~vs~~~~p~~~~~~~~~~vRis~~~~tt~g~~~~di~~ 397 (452)
T PTZ00094 323 GYDLVTGGTDNHLVLVDLRPF---G-ITGSKM-EKLLDAVNISVNKNTIPGDKSALNPSGVRLGTPALTTRGAKEKDFKF 397 (452)
T ss_pred CcEEecCCCCCceEeecCCcC---C-CCHHHH-HHHHHHCCcEEecccCCCCCcCCCCCeEEECCHHHHhCCCCHHHHHH
Confidence 665332111122334444321 1 134444 444577899994 4444332 578999996 44 899999
Q ss_pred HHHHHHHHHHHh
Q 014603 407 GLGRMKAFYDRH 418 (422)
Q Consensus 407 ~~~~l~~~~~~~ 418 (422)
+++.|.+++..+
T Consensus 398 l~~~l~~~~~~~ 409 (452)
T PTZ00094 398 VADFLDRAVKLA 409 (452)
T ss_pred HHHHHHHHHHHH
Confidence 999999998753
No 283
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.88 E-value=4.9e-20 Score=175.05 Aligned_cols=341 Identities=16% Similarity=0.139 Sum_probs=215.5
Q ss_pred cCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHH
Q 014603 42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ 121 (422)
Q Consensus 42 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 121 (422)
.+|+.++||..|......+ ..+|.+.+++.+++.+....... ....+.+..+++.|.+..+ ...+.++++++|++
T Consensus 40 ~dG~~ylD~~~g~~~~~lG-h~~p~i~~Ai~~q~~~~~~~~~~--~~~~~~~~~la~~L~~~~p--~~~~~v~f~~SGsE 114 (428)
T PRK07986 40 ADGRRLVDGMSSWWAAIHG-YNHPQLNAAMKSQIDAMSHVMFG--GITHPPAIELCRKLVAMTP--QPLECVFLADSGSV 114 (428)
T ss_pred CCCCEEEEcchhHHhhcCC-CCCHHHHHHHHHHHhhcCCcccc--ccCCHHHHHHHHHHHhhCC--CCcCEEEEeCCcHH
Confidence 3689999999886443222 45789999999998763221111 1122444556666654332 23468999999999
Q ss_pred HHHHHHHHhcC-------CCCEEEecCCCccchHHHHhhC-CC-------------eEEEeeccCCCCc-----ccCHHH
Q 014603 122 AIEVILTVLAR-------PGANILLPRPGFPYYEARATHS-HL-------------EVRHFDLLPAKGW-----EVDLDA 175 (422)
Q Consensus 122 a~~~~~~~l~~-------~gd~Vl~~~~~~~~~~~~~~~~-g~-------------~~~~~~~~~~~~~-----~~d~~~ 175 (422)
|++.+++.... ...+|+....+||+....+... +. .+..++.. ...+ .-|++.
T Consensus 115 Ave~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~d~~~ 193 (428)
T PRK07986 115 AVEVAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAP-QSRFDGEWDERDIAP 193 (428)
T ss_pred HHHHHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCC-CcccchhhHHHHHHH
Confidence 99999886431 2368999999999865433322 11 01112111 0000 114556
Q ss_pred HHHhhcC--CceEEEEeCC--CCCccc-ccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEE
Q 014603 176 VEALADE--NTVALVIINP--GNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTL 250 (422)
Q Consensus 176 l~~~~~~--~~~~i~i~~p--~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i 250 (422)
+++.+.. +..+.++..| +...|. .++++.+++|.++|++||+++|+||++.++..+|... ....++..++++
T Consensus 194 l~~~l~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG~~f-a~~~~gv~PDi~-- 270 (428)
T PRK07986 194 FARLMAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTGKLF-ACEHAGIAPDIL-- 270 (428)
T ss_pred HHHHHHhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCCee-eecccCCCCCEE--
Confidence 6766642 3455666666 445565 4567899999999999999999999998876666542 222333333333
Q ss_pred ecCccccCCCC-ceeEEEEeeCCCCcccchhHHHHHHhh------hhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHH
Q 014603 251 GSISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKSF------LNISSDPATFIQGAVPQILEKTEEEFFSKITDILR 323 (422)
Q Consensus 251 ~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 323 (422)
+++|.+ ..| +++|.++++ +++.+.+... ...+.+.++++.+++.+.|+...+. +..++++
T Consensus 271 -t~gK~l-~gG~~p~~av~~~--------~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~L~~i~~~---~~~~~~~ 337 (428)
T PRK07986 271 -CLGKAL-TGGTMTLSATLTT--------REVAETISNGEAGCFMHGPTFMGNPLACAVANASLSLLESG---DWQQQVA 337 (428)
T ss_pred -Eechhh-hCCcccCcchhch--------HHHHHHhhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhC---CHHHHHH
Confidence 468996 467 588888875 4677777542 2234567889999999888864322 2345555
Q ss_pred HHHHHHHHHhhcC---CCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--
Q 014603 324 ETADICCDRLKEI---PCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA-- 398 (422)
Q Consensus 324 ~~~~~l~~~L~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~-- 398 (422)
++.+++.+.|+++ +.+. . ...-|.+..+.+... .....+...+ .++|+.+.+. .+.+|+.++
T Consensus 338 ~~g~~l~~~l~~l~~~~~i~-~-vRg~Gl~~~ve~~~~-----~~~~~~~~~l-~~~Gl~~~~~-----g~~i~~~Ppl~ 404 (428)
T PRK07986 338 AIEAQLREELAPLRDAPMVA-D-VRVLGAIGVVETTRP-----VNMAALQRFF-VEQGVWIRPF-----GKLIYLMPPYI 404 (428)
T ss_pred HHHHHHHHHHHHHhcCCCEE-e-EeccceEEEEEeCCc-----ccHHHHHHHH-HHCCcEEEec-----CCEEEEeCCCC
Confidence 5556666666553 3222 1 123366666666432 1234454544 6679999874 258999877
Q ss_pred cChHHHHHHHHHHHHHHHH
Q 014603 399 VEPSALEDGLGRMKAFYDR 417 (422)
Q Consensus 399 ~~~~~l~~~~~~l~~~~~~ 417 (422)
.+++++++++++|.+++++
T Consensus 405 it~~ei~~~~~~l~~~l~~ 423 (428)
T PRK07986 405 ILPEQLQRLTAAVNRAVQD 423 (428)
T ss_pred CCHHHHHHHHHHHHHHHhh
Confidence 7999999999999999865
No 284
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.88 E-value=5.6e-20 Score=174.88 Aligned_cols=345 Identities=14% Similarity=0.107 Sum_probs=214.8
Q ss_pred cCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHH
Q 014603 42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ 121 (422)
Q Consensus 42 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 121 (422)
.+|+.++||..|......+ ..+|++.+++.+++.+...... .....+.+..+++.+.... +...+.++|+++|++
T Consensus 41 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~q~~~~~~~~~--~~~~~~~~~~lae~L~~~~--p~~~~~v~f~~sGse 115 (429)
T PRK06173 41 KDGRRLIDGMSSWWAALHG-YNHPRLNAAATNQLAKMSHIMF--GGFTHEPAVELAQKLLEIL--PPSLNKIFFADSGSV 115 (429)
T ss_pred CCCCEEEEccchHHhccCC-CCCHHHHHHHHHHHHhcCCccc--cccCCHHHHHHHHHHHhhC--CCCcCEEEEeCCchH
Confidence 4789999998875443222 4579999999999876321111 0111233344454444322 223468999999999
Q ss_pred HHHHHHHHhcC-------CC-CEEEecCCCccchHHHHhhC-CC-------------eEEEeeccCCCCc-----ccCHH
Q 014603 122 AIEVILTVLAR-------PG-ANILLPRPGFPYYEARATHS-HL-------------EVRHFDLLPAKGW-----EVDLD 174 (422)
Q Consensus 122 a~~~~~~~l~~-------~g-d~Vl~~~~~~~~~~~~~~~~-g~-------------~~~~~~~~~~~~~-----~~d~~ 174 (422)
|++.+++.... +| .+|+....+||+....+... +. .+..+|.. ...+ .-+++
T Consensus 116 Ave~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~l~ 194 (429)
T PRK06173 116 AVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQP-SIKFGEEWNDEAIE 194 (429)
T ss_pred HHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCC-CcccchhHHHHHHH
Confidence 99999876431 23 57999999999853322211 10 01112211 0000 01355
Q ss_pred HHHHhhc--CCceEEEEeCC--CCCcccc-cCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEE
Q 014603 175 AVEALAD--ENTVALVIINP--GNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLT 249 (422)
Q Consensus 175 ~l~~~~~--~~~~~i~i~~p--~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~ 249 (422)
.+++.+. .+..+.++..| +...|.. +|++.++++.++|++||+++|+||++.++..+|... ....++..+++++
T Consensus 195 ~l~~~i~~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~-a~~~~gv~PDiv~ 273 (429)
T PRK06173 195 PLQDLLEQKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTGKLF-ALEHAGVVPDIMC 273 (429)
T ss_pred HHHHHHHhCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCcCCcch-HHHhcCCCCCEEE
Confidence 5666664 24466677777 5666765 788899999999999999999999998876666542 1222333333333
Q ss_pred EecCccccCCCC-ceeEEEEeeCCCCcccchhHHHHHHhh------hhhccCcchHHHHHHHHHHhhchHHHHHHHHHHH
Q 014603 250 LGSISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKSF------LNISSDPATFIQGAVPQILEKTEEEFFSKITDIL 322 (422)
Q Consensus 250 i~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~ 322 (422)
++|.+ ..| ++++.++++ +++.+.+... ...+...+++.++++.+.|+...+. ...+++
T Consensus 274 ---~gK~l-~gG~~p~~a~~~~--------~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~i~~~---~~~~~~ 338 (429)
T PRK06173 274 ---IGKAL-TGGYLTLSATITT--------EAIAQTICSGEAKCFMHGPTFMANPLACAIAAESIRLLLES---PWQQNI 338 (429)
T ss_pred ---eehhh-hCCccccceEEec--------HHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhC---CHHHHH
Confidence 68996 467 578888875 4677766421 1223457889999999888764322 235556
Q ss_pred HHHHHHHHHHhhcCCCCCCC-CCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--c
Q 014603 323 RETADICCDRLKEIPCITCP-KKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--V 399 (422)
Q Consensus 323 ~~~~~~l~~~L~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~ 399 (422)
+++.+++.+.|+++.+...+ .....|.+..+.+... .....+...+ .++||++.+.. +.+|+.++ .
T Consensus 339 ~~~g~~l~~~L~~~~~~~~v~~vRg~Gl~~~iel~~~-----~~~~~i~~~l-~e~Gi~v~~~g-----~~l~~~Ppl~i 407 (429)
T PRK06173 339 QRIEAQLKQELAPAAEFDSVAEVRVLGAIGVVEMKEP-----VNMATLQPRF-VEHGIWVRPFG-----KLVYIMPPFII 407 (429)
T ss_pred HHHHHHHHHHHHHhhcCCCeeeeeccceEEEEEeCCc-----ccHHHHHHHH-HHCCeEEEecC-----CEEEEeCCccC
Confidence 66666666666643122211 0123466766767532 1234555554 66799998742 58999998 7
Q ss_pred ChHHHHHHHHHHHHHHHHhc
Q 014603 400 EPSALEDGLGRMKAFYDRHA 419 (422)
Q Consensus 400 ~~~~l~~~~~~l~~~~~~~~ 419 (422)
+++++++++++|++++.+..
T Consensus 408 t~~ei~~~~~~l~~~l~~~~ 427 (429)
T PRK06173 408 SPDELSQLTSGLLRVLKQEY 427 (429)
T ss_pred CHHHHHHHHHHHHHHHHHHh
Confidence 89999999999999997753
No 285
>PRK06062 hypothetical protein; Provisional
Probab=99.88 E-value=8.2e-20 Score=175.07 Aligned_cols=351 Identities=16% Similarity=0.136 Sum_probs=213.2
Q ss_pred cCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHH
Q 014603 42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ 121 (422)
Q Consensus 42 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 121 (422)
.+|+.+|||..|......+ ..+|+|.+++.+++..... +.+ ....+.+..+++.|.+..+ ...+.++|+++|++
T Consensus 50 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~Ai~~q~~~~~~--~~~-~~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGsE 123 (451)
T PRK06062 50 YEGRRYLDFSSQLVNTNIG-HQHPKVVAAIQEQAARLCT--VAP-AHANDARSEAARLIAERAP--GDLSKVFFTNGGAD 123 (451)
T ss_pred CCCCEEEEcccCHHhhcCC-CCCHHHHHHHHHHHHhcCC--cCC-ccCCHHHHHHHHHHHHhCC--CCCCEEEEcCChHH
Confidence 4689999999886543222 4578999999999876322 111 1123444555555544322 23468999999999
Q ss_pred HHHHHHHHhc--CCCCEEEecCCCccchHHHHhhC-CC-----------eEEEeeccCCC--Ccc--cC-------HHHH
Q 014603 122 AIEVILTVLA--RPGANILLPRPGFPYYEARATHS-HL-----------EVRHFDLLPAK--GWE--VD-------LDAV 176 (422)
Q Consensus 122 a~~~~~~~l~--~~gd~Vl~~~~~~~~~~~~~~~~-g~-----------~~~~~~~~~~~--~~~--~d-------~~~l 176 (422)
|++.+++... ....+|+....+||++...+... +. .+..++..... .+. -| ++.+
T Consensus 124 Ave~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l 203 (451)
T PRK06062 124 ANEHAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECERALAHL 203 (451)
T ss_pred HHHHHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHHHHHHHHH
Confidence 9999988643 12368999999999885544422 11 11111111000 010 01 4566
Q ss_pred HHhhcC---CceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEe
Q 014603 177 EALADE---NTVALVIINP-GNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLG 251 (422)
Q Consensus 177 ~~~~~~---~~~~i~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~ 251 (422)
++.++. +..+.++..| +...|.+ +|.+.++++.++|++||+++|+||++.++..+|... ....++..++++
T Consensus 204 e~~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~-a~~~~gv~PDi~--- 279 (451)
T PRK06062 204 ERVIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTGKWF-AIEHFGVVPDLI--- 279 (451)
T ss_pred HHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCcHHH-HHHhcCCCCCee---
Confidence 776642 4456677777 4455665 678889999999999999999999999877666432 122233333333
Q ss_pred cCccccCCCC-ceeEEEEeeCCCCcccchhHHHHHHhh---hhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHH--HH
Q 014603 252 SISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKSF---LNISSDPATFIQGAVPQILEKTEEEFFSKITDILR--ET 325 (422)
Q Consensus 252 s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~--~~ 325 (422)
+++|.+ ..| +++|.++++ +++++.+... ...+.+.++++++++.+.|+...++.+.+..++.. ..
T Consensus 280 t~gK~l-ggG~~Pigav~~~--------~~i~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~~~l~~~~~~~G~~~l 350 (451)
T PRK06062 280 TFAKGV-NSGYVPLGGVAIS--------EAIAATFADRPYPGGLTYSGHPLACAAAVATINAMEEEGIVENAARIGAEVL 350 (451)
T ss_pred eechhh-hcCCcCcEEEEEc--------HHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 468995 457 489999986 4677776432 22345778899999999998644332222222221 23
Q ss_pred HHHHHHHhhcCCCCCCCCCCCCceEEEEecCccc--ccCC-C------CHHHHHHHHHHhcCeEEecCCCCCCCCeEEEE
Q 014603 326 ADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSL--LEGI-N------SDMEFALKLAKEESVIVLPGITVGLKDWLRIT 396 (422)
Q Consensus 326 ~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~-~------~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis 396 (422)
++.|.+..++.|.+. . ...-|.++.+.+.... .... . ....+... +.++||++.+. .+.+|++
T Consensus 351 ~~~L~~l~~~~~~v~-~-vrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~Gvl~~~~-----~~~lrl~ 422 (451)
T PRK06062 351 GPGLRELAERHPSVG-E-VRGLGVFWALELVADRETREPLAPYGASSAAMAAVKAA-CKERGLLPFVN-----GNRIHVV 422 (451)
T ss_pred HHHHHHHHhcCCcEE-e-EeccccEEEEEEcccccccCCCcccchhhHHHHHHHHH-HHHCCcEEeec-----CCEEEEE
Confidence 333333333343222 1 2233666666663210 0000 0 02234444 45679998652 3679998
Q ss_pred ec--cChHHHHHHHHHHHHHHHHhc
Q 014603 397 FA--VEPSALEDGLGRMKAFYDRHA 419 (422)
Q Consensus 397 ~~--~~~~~l~~~~~~l~~~~~~~~ 419 (422)
++ +++++|++++++++++++++.
T Consensus 423 ppl~~t~~eid~~~~~l~~~l~~~~ 447 (451)
T PRK06062 423 PPCTVTEDEVREGLAILDAALAVAD 447 (451)
T ss_pred CCccCCHHHHHHHHHHHHHHHHHhh
Confidence 85 799999999999999998754
No 286
>PRK07046 aminotransferase; Validated
Probab=99.88 E-value=8.8e-20 Score=174.60 Aligned_cols=341 Identities=13% Similarity=0.084 Sum_probs=207.8
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 122 (422)
+|+.+|||..|...... -..+|.+.+++.+++.......+ + .+.+..+++.+.+.. ..+.+.|+++|++|
T Consensus 73 DG~~yiD~~~g~g~~~l-Gh~~p~i~~Av~~q~~~~~~~~~-~----~~~~~~lAe~l~~~~----~~~~v~F~nSGtEA 142 (453)
T PRK07046 73 DGHRYDDFCLGDTGAMF-GHSPAPVARALAEQARRGLTTML-P----SEDAAWVGEELARRF----GLPYWQVATTATDA 142 (453)
T ss_pred CCCEEEEeccccccccc-CCCCHHHHHHHHHHHHhCCCCCC-C----CHHHHHHHHHHHHHh----CCCEEEEECCHHHH
Confidence 68889999877644322 24678999999999987433222 2 244444555554432 25789999999999
Q ss_pred HHHHHHHhc--CCCCEEEecCCCccchHHHHhh--CCCeEE----E--ee--ccC---CCCcccCHHHHHHhhcCCceEE
Q 014603 123 IEVILTVLA--RPGANILLPRPGFPYYEARATH--SHLEVR----H--FD--LLP---AKGWEVDLDAVEALADENTVAL 187 (422)
Q Consensus 123 ~~~~~~~l~--~~gd~Vl~~~~~~~~~~~~~~~--~g~~~~----~--~~--~~~---~~~~~~d~~~l~~~~~~~~~~i 187 (422)
.+.+++... ...++|+....+||++...... ...... . ++ ... .-.| -|++.+++.+..+..+.
T Consensus 143 ~e~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-nd~~~l~~~l~~~~vAa 221 (453)
T PRK07046 143 NRFVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVEF-NDLAALEAALADGDVAA 221 (453)
T ss_pred HHHHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeCC-CCHHHHHHHhCCCCeEE
Confidence 999988642 2237899999999997432221 010000 0 00 000 0011 17888988886555677
Q ss_pred EEeCC-CCCccc-ccCHHHHHHHHHHHHHcCcEEEEcccccccc--cCCCCCCCccccCCCCCeEEEecCccccCCCCce
Q 014603 188 VIINP-GNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLA--FGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWR 263 (422)
Q Consensus 188 ~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~--~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r 263 (422)
+|..| +...|. .++++.++++.++|++||+++|+||++. +. ++|. . ..++..++++ +++|.+ ..|++
T Consensus 222 vi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~t-fr~g~Gg~--~--~~~gv~PDi~---t~gK~l-ggG~P 292 (453)
T PRK07046 222 VLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHT-ISSGPGGY--T--RAHGLEPDFL---VVGKPI-AGGVP 292 (453)
T ss_pred EEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccc-CccCCcch--h--HHhCCCccce---eehhhh-cCCCc
Confidence 77888 434454 4566789999999999999999999997 32 2221 1 1223223333 468995 56899
Q ss_pred eEEEEeeCCCCcccchhHHHHHHhh----------hhhccCcchHHHHHHHHHHhhch-HHHHHHHHHHHHHHHHHHHHH
Q 014603 264 LGWLVTSDPNGILQDSGIVDSIKSF----------LNISSDPATFIQGAVPQILEKTE-EEFFSKITDILRETADICCDR 332 (422)
Q Consensus 264 ~G~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~ 332 (422)
+|.++++ +++++.+... ...+.+.++++++++.+.|+... ++.+++..+.-...++.+.+.
T Consensus 293 i~av~g~--------~~i~~~~~~~~~~~~~~~~~~~~T~~gnpl~~aa~~a~L~~l~~~~~~~~~~~~g~~l~~~L~~l 364 (453)
T PRK07046 293 CAVYGFS--------AELAERAQAAKASAPPGHSGIGTTLSANALAMAAMRATLAEVMTEAAYAHMLALAARLAAGLRAV 364 (453)
T ss_pred ceeeeeh--------HHHHHHHhhccccCCCCCceeCCCCcccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 9999885 4677777531 12245678899999999888643 233444444444444444444
Q ss_pred hhcCCCCCCCCCCCCceEEEEecCcccccCC------CC---HHHHHHHHHHhcCeEEecCCCCCCCCeEEEEeccChHH
Q 014603 333 LKEIPCITCPKKPEGSMFVMVKLNYSLLEGI------NS---DMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSA 403 (422)
Q Consensus 333 L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~---~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~ 403 (422)
+++. ++... ...-|..+.+.+........ .+ ...+...+ .++||.+.|. .+.+++++.+++++
T Consensus 365 ~~~~-~~~~~-v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Gv~~~~~-----~~~~~~~p~~t~~d 436 (453)
T PRK07046 365 IARH-GLPWH-VTRVGARVEFQFAPTPPRNGAEAAAALDPELEAALHLYL-LNRGVLITPF-----HNMMLVCPATTAAD 436 (453)
T ss_pred HHhC-CCCeE-EEEeCcEEEEEEeCCCCCCHHHHhcccCHHHHHHHHHHH-HHCCCEEecc-----cCcEEEeCCCCHHH
Confidence 4444 22211 11223333344321100000 01 12233333 4579999873 24678998899999
Q ss_pred HHHHHHHHHHHHHHhc
Q 014603 404 LEDGLGRMKAFYDRHA 419 (422)
Q Consensus 404 l~~~~~~l~~~~~~~~ 419 (422)
|+++++++.++++++.
T Consensus 437 id~~~~~~~~~l~~~~ 452 (453)
T PRK07046 437 VDRLVAAFDACLGELL 452 (453)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999998753
No 287
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.88 E-value=5.7e-20 Score=174.66 Aligned_cols=341 Identities=15% Similarity=0.110 Sum_probs=211.0
Q ss_pred cCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHH
Q 014603 42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ 121 (422)
Q Consensus 42 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 121 (422)
.+|+.++||..|......+ ..+|++.+++.+++.+.....+.. ...+.+..+++.+.+..+ ...+.++++++|++
T Consensus 37 ~dG~~ylD~~~g~~~~~lG-h~~p~i~~ai~~q~~~~~~~~~~~--~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGse 111 (422)
T PRK05630 37 EDGSTVIDAMSSWWSAAHG-HGHPRLKAAAHKQIDTMSHVMFGG--LTHEPAIKLTRKLLNLTD--NGLDHVFYSDSGSV 111 (422)
T ss_pred CCCCEEEEcchhHHHhcCC-CCCHHHHHHHHHHHHhCCCcccCC--cCCHHHHHHHHHHHhhCC--CCcCEEEEeCCcHH
Confidence 4789999998886553222 457899999999998632211111 112334445555544222 22468999999999
Q ss_pred HHHHHHHHhcC-------CC-CEEEecCCCccchHHHHhhC-CC-------------eEEEeeccCCCCccc-C----HH
Q 014603 122 AIEVILTVLAR-------PG-ANILLPRPGFPYYEARATHS-HL-------------EVRHFDLLPAKGWEV-D----LD 174 (422)
Q Consensus 122 a~~~~~~~l~~-------~g-d~Vl~~~~~~~~~~~~~~~~-g~-------------~~~~~~~~~~~~~~~-d----~~ 174 (422)
|++.+++.... ++ .+|+....+||+....+... +. ....+|..+...... + .+
T Consensus 112 A~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 191 (422)
T PRK05630 112 SVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPVRGSSPQEISEYLR 191 (422)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCcccCCChHHHHHHHH
Confidence 99999876431 23 57999999999865443322 10 112222211000000 1 23
Q ss_pred HHHHhhcCCceEEEEeCC--CCCccc-ccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEe
Q 014603 175 AVEALADENTVALVIINP--GNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLG 251 (422)
Q Consensus 175 ~l~~~~~~~~~~i~i~~p--~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~ 251 (422)
.+++.+.+ ..+.+|..| +...|. .++.+.++++.++|++||+++|+||++.++..+|... .....+..++++
T Consensus 192 ~~~~~~~~-~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG~~~-a~~~~gv~PDi~--- 266 (422)
T PRK05630 192 SLELLIDE-TVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTGELF-ATLAAGVTPDIM--- 266 (422)
T ss_pred HHHHHHhh-ceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCchhh-HHHhcCCCCCee---
Confidence 34444543 455566666 566676 4677889999999999999999999998877666432 222233333333
Q ss_pred cCccccCCCC-ceeEEEEeeCCCCcccchhHHHHHHhh-------hhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHH
Q 014603 252 SISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKSF-------LNISSDPATFIQGAVPQILEKTEEEFFSKITDILR 323 (422)
Q Consensus 252 s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 323 (422)
+++|.+ ..| .++|+++++ +++.+.+... ...+...+++.++++.++|+...+. ...++++
T Consensus 267 t~gK~l-~gG~~p~~av~~~--------~~i~~~~~~~~~~~~~~h~~T~~g~Pla~aaa~aaL~~l~~~---~~~~~~~ 334 (422)
T PRK05630 267 CVGKAL-TGGFMSFAATLCT--------DKVAQLISTPNGGGALMHGPTFMANPLACAVAHASLEIIETG---MWRKQVK 334 (422)
T ss_pred eeechh-hcCccccceeecc--------HHHHHHHhccCCCCccccCCCCcCCHHHHHHHHHHHHHHHhC---cHHHHHH
Confidence 568985 456 578999886 4677766421 1234577889999998888864422 2233455
Q ss_pred HHHHHHHHHhhc---CCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--
Q 014603 324 ETADICCDRLKE---IPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA-- 398 (422)
Q Consensus 324 ~~~~~l~~~L~~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~-- 398 (422)
++.+++++.|++ .|.+. . ...-|.+..+.+... .+...+... +.++|+++.+. .+.+|+.++
T Consensus 335 ~~g~~l~~~L~~l~~~~~v~-~-vRg~Gl~~~ie~~~~-----~~~~~~~~~-~~~~Gl~~~~~-----g~~l~~~PpL~ 401 (422)
T PRK05630 335 RIEAELIAGLSPLAHLPGVA-D-VRVLGAIGVVEMEQP-----VDMEEATQA-AVDHGVWLRPF-----GRLVYVMPPYI 401 (422)
T ss_pred HHHHHHHHHHHHhhcCCCee-e-eeccccEEEEEECCc-----ccHHHHHHH-HHHCCeEEEec-----CCEEEEECCcc
Confidence 555555555543 33322 1 123367777777432 123444444 56679999763 268999987
Q ss_pred cChHHHHHHHHHHHHHHHH
Q 014603 399 VEPSALEDGLGRMKAFYDR 417 (422)
Q Consensus 399 ~~~~~l~~~~~~l~~~~~~ 417 (422)
.+++++++++++|++++++
T Consensus 402 it~~~i~~~~~~l~~al~~ 420 (422)
T PRK05630 402 TTSEQIAQICAALAAAVKA 420 (422)
T ss_pred CCHHHHHHHHHHHHHHHhc
Confidence 7899999999999999864
No 288
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.88 E-value=1.4e-19 Score=171.82 Aligned_cols=227 Identities=17% Similarity=0.112 Sum_probs=159.0
Q ss_pred CCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchH----HHHhhCCCeEEEeec
Q 014603 88 GILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYE----ARATHSHLEVRHFDL 163 (422)
Q Consensus 88 g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~----~~~~~~g~~~~~~~~ 163 (422)
....+++.++++++ .+..++++++++|+.+++.+++++||+|+++...|.+.. ..+...|++++.++
T Consensus 70 t~~~le~~la~l~g--------~~~~v~fsSG~~Ai~~al~~ll~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~vd- 140 (437)
T PRK05613 70 TVEALENRIASLEG--------GVHAVAFASGQAAETAAILNLAGAGDHIVTSPRLYGGTETLFLVTLNRLGIEVTFVE- 140 (437)
T ss_pred HHHHHHHHHHHHhC--------CCeEEEeCCHHHHHHHHHHHhcCCCCEEEECCCccHHHHHHHHHHHHhcCeEEEEEC-
Confidence 35678888888872 245566666668998888888899999999999998763 34466788888876
Q ss_pred cCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCC
Q 014603 164 LPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS 243 (422)
Q Consensus 164 ~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~ 243 (422)
++ .|++.+++.++++++++++.++.||+|.+ .++++|.++|+++|+++|+|.+++... ...++ .++.
T Consensus 141 ~~-----~d~e~l~~~l~~~tk~V~~e~~~Np~~~v---~di~~I~~la~~~gi~livD~t~a~g~----~~~p~-~~Ga 207 (437)
T PRK05613 141 NP-----DDPESWQAAVQPNTKAFFGETFANPQADV---LDIPAVAEVAHRNQVPLIVDNTIATAA----LVRPL-ELGA 207 (437)
T ss_pred CC-----CCHHHHHHhCCccCeEEEEECCCCCCCcc---cCHHHHHHHHHHcCCeEEEECCCcccc----ccChH-HhCC
Confidence 22 27899999999999999989999999988 468888999999999999999986522 11122 3344
Q ss_pred CCCeEEEecCccccCCCCceeEEEEeeCCCCcc----------------------------cchhHHHHHH--hhhhhcc
Q 014603 244 IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGIL----------------------------QDSGIVDSIK--SFLNISS 293 (422)
Q Consensus 244 ~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~----------------------------~~~~~~~~~~--~~~~~~~ 293 (422)
| +++.|++|.+++.|.-+|.+++.++...+ ....+..+.. .......
T Consensus 208 D---ivv~S~~K~l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 284 (437)
T PRK05613 208 D---VVVASLTKFYTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYFVTPDPAYHGLKYADLGAPAFGLKARAGLLRDTGA 284 (437)
T ss_pred C---EEEeeccceecCCCcceeEEEEecCcccccccccccccCCCCCCCccccccccccccchHHHHHHHHHHHHHhcCC
Confidence 3 89999999988777666665553211000 0000111111 1112334
Q ss_pred CcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC
Q 014603 294 DPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKK 344 (422)
Q Consensus 294 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 344 (422)
..++...+.+..-|+. +.-+.++..++...+.+.|+++|.+..+.+
T Consensus 285 ~~~p~~a~l~~rgl~T-----L~lR~~~~~~nA~~lA~~L~~hp~V~~V~y 330 (437)
T PRK05613 285 TLSPFNAWVTAQGLDT-----LSLRLERHNENAIKVAEFLNNHEKVAKVNF 330 (437)
T ss_pred CCCHHHHHHHHcccCc-----HHHHHHHHHHHHHHHHHHHHcCCCcceEEC
Confidence 6677777776666665 677778888999999999999887643333
No 289
>PRK06105 aminotransferase; Provisional
Probab=99.88 E-value=1.1e-19 Score=174.63 Aligned_cols=350 Identities=17% Similarity=0.149 Sum_probs=215.3
Q ss_pred cCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCC-CCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHH
Q 014603 42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARF-NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT 120 (422)
Q Consensus 42 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~-~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~ 120 (422)
.+|+.+|||..|......+ ..+|++.+++.+++.+... .... ....+.+..+++.|.+..+ .+.+.++|+++|+
T Consensus 45 ~dG~~ylD~~~g~~~~~lG-h~~p~i~~Ai~~q~~~~~~~~~~~--~~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGs 119 (460)
T PRK06105 45 DAGKRYIEGMAGLWSVALG-FSEQRLVEAAARQMKKLPFYHTFS--HKSHGPVIDLAEKLVAMAP--VPMSKVFFTNSGS 119 (460)
T ss_pred CCCCEEEEcchhHHhccCC-CCCHHHHHHHHHHHHhCCCeeccc--ccCCHHHHHHHHHHHHhCC--CCCCEEEEeCCcH
Confidence 3689999999886553333 4578999999999976321 1111 1122344445555544332 2346899999999
Q ss_pred HHHHHHHHHhc------C-C-CCEEEecCCCccchHHHHhhC-CCe------------EEEeeccCCCCc----------
Q 014603 121 QAIEVILTVLA------R-P-GANILLPRPGFPYYEARATHS-HLE------------VRHFDLLPAKGW---------- 169 (422)
Q Consensus 121 ~a~~~~~~~l~------~-~-gd~Vl~~~~~~~~~~~~~~~~-g~~------------~~~~~~~~~~~~---------- 169 (422)
+|++++++... . + ..+|+....+||+....+... +.. +..++......+
T Consensus 120 eAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 199 (460)
T PRK06105 120 EANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESEEAF 199 (460)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCcccccccCCCChHHH
Confidence 99999998742 1 2 257999999998875443221 111 111111000000
Q ss_pred -ccCHHHHHHhhc---CCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCC
Q 014603 170 -EVDLDAVEALAD---ENTVALVIINP-GNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS 243 (422)
Q Consensus 170 -~~d~~~l~~~~~---~~~~~i~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~ 243 (422)
....+++++.+. .+..+.+|..| +...|.. +|++.++++.++|++||+++|+||++.++..+|... ....++.
T Consensus 200 ~~~~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~~f-~~~~~~v 278 (460)
T PRK06105 200 ATRLANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGNMF-GCETFGI 278 (460)
T ss_pred HHHHHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCchhh-hHHhcCC
Confidence 001345666552 24556677777 5555664 688899999999999999999999999887777543 2333333
Q ss_pred CCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhh--------hhhccCcchHHHHHHHHHHhhchHHHH
Q 014603 244 IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSF--------LNISSDPATFIQGAVPQILEKTEEEFF 315 (422)
Q Consensus 244 ~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~a~~~~l~~~~~~~~ 315 (422)
.++++ +++|.++...+++|.++++ +++.+.+... ...+.+.++++.+++.+.|+...++
T Consensus 279 ~PDi~---~~gK~lggG~~P~~av~~~--------~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~i~~~-- 345 (460)
T PRK06105 279 KPDIL---VMSKQLSSSYQPLSAVLMN--------EKVYDPIADESGKIGTFGHGFTASGHPVAAAVALENLAIIEER-- 345 (460)
T ss_pred CCCee---eeecccccCcccceEEEEc--------HHHHHHHhcccccCcccccCCCCCCCHHHHHHHHHHHHHHHhc--
Confidence 33333 4579965433689999986 4677766532 2234577889999998888865422
Q ss_pred HHHHHHHHHHHHHHHHHhhc---CCCCCCCCCCCCceEEEEecCcccc--cCCCC----HHHHHHHHHHhcCeEEecCCC
Q 014603 316 SKITDILRETADICCDRLKE---IPCITCPKKPEGSMFVMVKLNYSLL--EGINS----DMEFALKLAKEESVIVLPGIT 386 (422)
Q Consensus 316 ~~~~~~~~~~~~~l~~~L~~---~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~----~~~~~~~l~~~~gi~v~~g~~ 386 (422)
+..++++++.+++++.|++ +|.+. . ...-|.+..+.+..... ..... ...+... +.++||.+.+.
T Consensus 346 -~l~~~v~~~g~~l~~~L~~l~~~~~v~-~-vrG~Gl~~gie~~~~~~~~~~~~~~~~~a~~i~~~-~~~~Gvl~~~~-- 419 (460)
T PRK06105 346 -DLVGNAAERGARLQARLRALADHPLVG-E-VRGVGLIAAVELVADKATKTPFEPPGKVGARANAA-AHEHGVISRAM-- 419 (460)
T ss_pred -cHHHHHHHHHHHHHHHHHHhhcCCCeE-E-EEecceEEEEEEecCcccCCCCCchhHHHHHHHHH-HHHCCeEEEec--
Confidence 2344455555555555544 33222 1 22336666666632110 00001 1234444 46779999874
Q ss_pred CCCCCeEEEEec--cChHHHHHHHHHHHHHHHHhc
Q 014603 387 VGLKDWLRITFA--VEPSALEDGLGRMKAFYDRHA 419 (422)
Q Consensus 387 ~~~~~~iRis~~--~~~~~l~~~~~~l~~~~~~~~ 419 (422)
.+.+|+++. .++++++++++++.++++++.
T Consensus 420 ---g~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~ 451 (460)
T PRK06105 420 ---GDTLAFCPPLIITAAQVDEMVDRFGRALDDVA 451 (460)
T ss_pred ---CCEEEEECCCccCHHHHHHHHHHHHHHHHHHH
Confidence 258999987 689999999999999998764
No 290
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.88 E-value=4.8e-20 Score=156.50 Aligned_cols=326 Identities=16% Similarity=0.191 Sum_probs=213.0
Q ss_pred CCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHH
Q 014603 45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIE 124 (422)
Q Consensus 45 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~ 124 (422)
...+||-+...+ -+..+++++|.++...+.. |+......+|++.+|++++ .+.-+|+++||.++.
T Consensus 21 ~~~vDLRSDTvT-----~PTdeMr~am~eA~vgDdV--yGeD~tt~rLE~~vA~l~G--------KEAgLFv~SGTmgNl 85 (384)
T KOG1368|consen 21 HRSVDLRSDTVT-----VPTDEMRRAMAEASVGDDV--YGEDPTTNRLEQRVAELFG--------KEAGLFVPSGTMGNL 85 (384)
T ss_pred eecccccccccc-----CChHHHHHHHhhcccCccc--ccCCccHHHHHHHHHHHhC--------ccceeeecccccccH
Confidence 445677665544 3457899999998776554 6665567899999999984 344455555555555
Q ss_pred HHHHH-hcCCCCEEEecCCCc-cchHH--HHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC--------CceEEEEeCC
Q 014603 125 VILTV-LARPGANILLPRPGF-PYYEA--RATHSHLEVRHFDLLPAKGWEVDLDAVEALADE--------NTVALVIINP 192 (422)
Q Consensus 125 ~~~~~-l~~~gd~Vl~~~~~~-~~~~~--~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~--------~~~~i~i~~p 192 (422)
++++. +-++|.+|++.+.+| +.|.. ++.+.|+.++ ++.++++..+++++++..+.. -++++.+.|-
T Consensus 86 laIm~Hc~~rg~eii~gd~~HI~~~E~gg~s~l~gv~~~--tv~~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT 163 (384)
T KOG1368|consen 86 LAIMVHCHQRGSEIIVGDRAHIHRYEQGGISQLAGVHVR--TVKNENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENT 163 (384)
T ss_pred HHHHHHhcCCCceEEeccchheeehhccChhhhccceeE--eeeeCCCCeeeHHHHHHhhcCCCCCccCCCceEEEeecc
Confidence 55554 556999999999888 33433 3334454444 445667778999999998752 3688889998
Q ss_pred CCCcc-cccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeC
Q 014603 193 GNPCG-NVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD 271 (422)
Q Consensus 193 ~nptG-~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~ 271 (422)
+|.+| .++|.+++.++.++|+++|+.++.|.+--+-.-... -.++..+...-+.+.+ .+||.+|.| +|.++..+
T Consensus 164 ~~~~Gg~vlPle~~~~v~~lak~~glkLH~DGARi~NAavas-gV~vk~i~~~fDSVsi-CLSKglgAP---VGSViVG~ 238 (384)
T KOG1368|consen 164 HNNCGGKVLPLEELDRVKALAKRHGLKLHMDGARIFNAAVAS-GVPVKKICSAFDSVSI-CLSKGLGAP---VGSVIVGS 238 (384)
T ss_pred ccccCceEeeHHHHHHHHHHHhccCCeeecchhhhhhHHHHc-CCCHHHHHHhhhhhhh-hhhccCCCC---cccEEEcc
Confidence 76555 999999999999999999999999998643111111 1123332211111222 578997555 68777653
Q ss_pred CCCcccchhHHHHHHhhhhhcc---CcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC-CC
Q 014603 272 PNGILQDSGIVDSIKSFLNISS---DPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKP-EG 347 (422)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~ 347 (422)
.+++++.+..+-..+ ..+.+..+|+..+|++. +. ..+.-.++...+.+.+...+++. +..| ..
T Consensus 239 -------k~FI~kA~~~RKalGGGmRQsGvLaaaaLval~~~----~~-~L~~dHk~A~~lAe~~~~~~~i~-v~v~a~e 305 (384)
T KOG1368|consen 239 -------KDFIDKARHFRKALGGGMRQSGVLAAAALVALDEN----VP-LLRADHKRAKELAEYINTPEEIR-VEVPAVE 305 (384)
T ss_pred -------HHHHHHHHHHHHHhcCchhHHHHHHHHHHHHhhcc----hH-HHHHHHHHHHHHHHHhcccccee-eecchhh
Confidence 567777766553222 23445556666666542 22 33334455666666777666566 3344 44
Q ss_pred ceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHHHHHH
Q 014603 348 SMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGRMKAF 414 (422)
Q Consensus 348 g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~l~~~ 414 (422)
.++..+.+.... .+..++...+ +++||.+.+|.. ..+||.+. .++++++..+..+.+.
T Consensus 306 tNiv~~~l~q~~----~~~~~l~~~~-~k~gi~lm~~~s----~r~Rivlh~Qvt~~~ve~~~~~~~k~ 365 (384)
T KOG1368|consen 306 TNIVNMVLCQAR----LTAEELCKFL-EKNGILLMGGAS----RRIRIVLHHQVTDEDVEYVKSVLSKK 365 (384)
T ss_pred cceeeeeccccc----CCHHHHHHHH-HHCCeEEeeccc----cceEEEEEEecCHHHHHHHHHHHHHH
Confidence 566666554322 2566776665 788999998764 34899997 7899999999999543
No 291
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.88 E-value=1.5e-19 Score=173.47 Aligned_cols=348 Identities=13% Similarity=0.108 Sum_probs=210.3
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 122 (422)
+|+.+|||..+. ....+ ..+|.|.+++.+++.... +.......+.+..+++.|.+..+ ...+.++|++||++|
T Consensus 70 dG~~ylD~~g~~-~~~lG-h~~p~v~~Ai~~ql~~~~---~~~~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGseA 142 (459)
T PRK06082 70 DGKKYMDFHGNN-VHQLG-YGHPHVIEKVKEQMAKLP---FSPRRFTNETAIECAEKLTEIAG--GELNRVLFAPGGTSA 142 (459)
T ss_pred CCCEEEEcccHh-hcccC-CCCHHHHHHHHHHHHhCC---CccCccCCHHHHHHHHHHHHhCC--CCCCEEEECCCcHHH
Confidence 578899987432 21122 368999999999987532 11111123444455555544332 224689999999999
Q ss_pred HHHHHHHhc--CCCCEEEecCCCccchHHHHhh-CCCe------------EEEeeccCCC--Ccc-c------CHHHHHH
Q 014603 123 IEVILTVLA--RPGANILLPRPGFPYYEARATH-SHLE------------VRHFDLLPAK--GWE-V------DLDAVEA 178 (422)
Q Consensus 123 ~~~~~~~l~--~~gd~Vl~~~~~~~~~~~~~~~-~g~~------------~~~~~~~~~~--~~~-~------d~~~l~~ 178 (422)
++.+++... ....+|+....+||+....+.. .+.. +..++..... .+. . .++.+++
T Consensus 143 ve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 222 (459)
T PRK06082 143 IGMALKLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEY 222 (459)
T ss_pred HHHHHHHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHH
Confidence 999987653 2237899999999887543332 2211 1112110000 010 0 1244666
Q ss_pred hhcC-CceEEEEeCC-CCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccc
Q 014603 179 LADE-NTVALVIINP-GNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKR 256 (422)
Q Consensus 179 ~~~~-~~~~i~i~~p-~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~ 256 (422)
.+.. +..+.+|..| ++..+..+|.+.++++.++|++||+++|+||++.++..+|... ....++..+++++ ++|.
T Consensus 223 ~i~~~~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~f-a~e~~gv~PDiv~---~gKg 298 (459)
T PRK06082 223 VIEKEGGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTGEWF-THQAYGIEPDILC---IGKG 298 (459)
T ss_pred HHhcCCCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhh-HhHhhCCCCCEEE---eccc
Confidence 6642 3456677777 4444456788899999999999999999999999887777532 2223333334443 6899
Q ss_pred cCCCC-ceeEEEEeeCCCCcccchhHHHHHHh-hhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhh
Q 014603 257 WIVPG-WRLGWLVTSDPNGILQDSGIVDSIKS-FLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLK 334 (422)
Q Consensus 257 ~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~ 334 (422)
++ .| +++|.+++++ ++...... ....+.+.++++.+++.+.|+...++ +..++++++-+++.+.|+
T Consensus 299 l~-gG~~P~~av~~~~--------~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~L~ 366 (459)
T PRK06082 299 LG-GGLVPIAAMITKD--------KYNTAAQISLGHYTHEKSPLGCAAALATIEVIEQE---GLLEKVKADSQFMRERLL 366 (459)
T ss_pred cc-CCCCcceEEEEcH--------HHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHH
Confidence 65 56 6999998863 44433221 11235577889999998888864322 244455555555555554
Q ss_pred c----CCCCCCCCCCCCceEEEEecCcccc-cCC--CCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHH
Q 014603 335 E----IPCITCPKKPEGSMFVMVKLNYSLL-EGI--NSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALE 405 (422)
Q Consensus 335 ~----~~~~~~~~~~~~g~~~~~~~~~~~~-~~~--~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~ 405 (422)
+ +|.+. . ...-|.++.+.+..... ... .....+... +.++|+.+.+.. .+.+|+++. +++++|+
T Consensus 367 ~l~~~~~~i~-~-vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~-~~~~Gvl~~~~~----~~~i~~~Ppl~it~~eid 439 (459)
T PRK06082 367 EMKAKYPLIG-D-VRGIGLLWGVELVTDRHTKERAYDEAEAVLYR-CLNNGLSFKVSQ----GNVIQLSPPLIITREELT 439 (459)
T ss_pred HHHhhCCCee-e-eeeccceeEEEEccCccccCccHHHHHHHHHH-HHhCCCEEEecC----CCEEEEeCCCccCHHHHH
Confidence 4 33222 1 23346677777742110 000 002234443 456799997742 478999986 6899999
Q ss_pred HHHHHHHHHHHHhcc
Q 014603 406 DGLGRMKAFYDRHAK 420 (422)
Q Consensus 406 ~~~~~l~~~~~~~~~ 420 (422)
++++++++++.++.+
T Consensus 440 ~~~~~l~~~l~~~~~ 454 (459)
T PRK06082 440 QALAILEEAIAKICQ 454 (459)
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999987644
No 292
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.88 E-value=1.9e-19 Score=172.26 Aligned_cols=351 Identities=16% Similarity=0.140 Sum_probs=214.2
Q ss_pred cCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHH
Q 014603 42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ 121 (422)
Q Consensus 42 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 121 (422)
.+|+.+|||..|......+ ..+|++.+++.+++.+... +.......+.+..+++.|.+..+ ...+.++|+++|++
T Consensus 46 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~ql~~l~~--~~~~~~~~~~~~~la~~L~~~~p--~~~~~v~f~~sGse 120 (445)
T PRK09221 46 ADGRKILDGTAGLWCCNAG-HGRPEIVEAVARQAATLDY--APAFQMGHPLAFELAERLAELAP--GGLDHVFFTNSGSE 120 (445)
T ss_pred CCCCEEEEccccHhhccCC-CCCHHHHHHHHHHHHhccC--ccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCCcHH
Confidence 4689999998886553222 4678999999999876211 11111112333445555544322 22468999999999
Q ss_pred HHHHHHHHhc------C-C-CCEEEecCCCccchHHHHhhCCC-------------eEEEeeccC---CCCccc------
Q 014603 122 AIEVILTVLA------R-P-GANILLPRPGFPYYEARATHSHL-------------EVRHFDLLP---AKGWEV------ 171 (422)
Q Consensus 122 a~~~~~~~l~------~-~-gd~Vl~~~~~~~~~~~~~~~~g~-------------~~~~~~~~~---~~~~~~------ 171 (422)
|++.+++... . + ..+|+....+||+....+..... .+..++... ...+..
T Consensus 121 Ave~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (445)
T PRK09221 121 SVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQPEHG 200 (445)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCccccccccCCChHHHH
Confidence 9999987543 1 1 25899999999987543322110 112222110 000000
Q ss_pred --CHHHHHHhhc---CCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCC
Q 014603 172 --DLDAVEALAD---ENTVALVIINP-GNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSI 244 (422)
Q Consensus 172 --d~~~l~~~~~---~~~~~i~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~ 244 (422)
..+.+++.+. .+..+.++..| +...|.. +|.+.++++.++|+++|+++|+||++.++..+|... ....++..
T Consensus 201 ~~~~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~-~~~~~gv~ 279 (445)
T PRK09221 201 AELADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAAF-AAERFGVT 279 (445)
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCchhh-HHHhcCCC
Confidence 1245666554 24455666777 5566764 577889999999999999999999998877766532 22233333
Q ss_pred CCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhh--------hhhccCcchHHHHHHHHHHhhchHHHHH
Q 014603 245 VPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSF--------LNISSDPATFIQGAVPQILEKTEEEFFS 316 (422)
Q Consensus 245 ~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~a~~~~l~~~~~~~~~ 316 (422)
+++ .+++|.++...+++|.++++ +++++.+... ...+.+.++++.+++.+.|+...++
T Consensus 280 PDi---~~~gK~l~gG~~Pi~av~~~--------~~i~~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~L~~i~~~--- 345 (445)
T PRK09221 280 PDI---ITFAKGLTNGAIPMGAVIAS--------DEIYDAFMQGPEYAIEFFHGYTYSAHPVACAAGLATLDIYREE--- 345 (445)
T ss_pred CCE---EEeccccccCcccceeeEEc--------HHHHHhhccCcccccccccccCCCcCHHHHHHHHHHHHHHHhc---
Confidence 333 35689964333788998885 4666665421 1234567888888888888764322
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCCC-CCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEE
Q 014603 317 KITDILRETADICCDRLKEIPCITCPK-KPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRI 395 (422)
Q Consensus 317 ~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi 395 (422)
...++++++.+++++.|+++.....+. ...-|.+..+.+............++...+ .++||++.++ .+.+|+
T Consensus 346 ~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrg~Gl~~~v~~~~~~~~~~~~~~~~~~~~-~~~Gv~~~~~-----~~~lr~ 419 (445)
T PRK09221 346 DLFERAAELAPYFEDAVHSLKGLPHVIDIRNIGLVAGIELAPRPGAPGARGYEAFMKC-FEKGLLVRYT-----GDTIAL 419 (445)
T ss_pred cHHHHHHHHHHHHHHHHHhhccCCCEEEEecCceEEEEEEecccccccchHHHHHHHH-HHCCeEEeec-----CCEEEE
Confidence 345666777777777776652211111 122355555555421110011133455544 5679999764 367999
Q ss_pred Eec--cChHHHHHHHHHHHHHHHHh
Q 014603 396 TFA--VEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 396 s~~--~~~~~l~~~~~~l~~~~~~~ 418 (422)
+++ .++++|++++++|++++.++
T Consensus 420 ~Ppl~~t~~eid~~~~~l~~~l~~~ 444 (445)
T PRK09221 420 SPPLIIEKAQIDELVDALGDALRAV 444 (445)
T ss_pred ECCccCCHHHHHHHHHHHHHHHHhh
Confidence 977 78999999999999999764
No 293
>PRK07483 hypothetical protein; Provisional
Probab=99.88 E-value=1.4e-19 Score=173.12 Aligned_cols=358 Identities=17% Similarity=0.169 Sum_probs=214.9
Q ss_pred cCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHH
Q 014603 42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ 121 (422)
Q Consensus 42 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 121 (422)
.+|+.+|||..|......+ ..+|.+.+++.+++++..... ......+....+++.|....+ ...+.++++++|++
T Consensus 27 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~av~~ql~~~~~~~--~~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGsE 101 (443)
T PRK07483 27 ATGKRYLDASGGAAVSCLG-HSHPRVIAAIHAQIDRLAYAH--TSFFTTEPAEALADRLVAAAP--AGLEHVYFVSGGSE 101 (443)
T ss_pred CCCCEEEEcCccHhhhccC-CCCHHHHHHHHHHHHhccCcc--ccccCCHHHHHHHHHHHHhCC--CCCCEEEEcCCcHH
Confidence 3689999999886553222 457899999999998632111 111112444455555544322 23468999999999
Q ss_pred HHHHHHHHhcC-------CC-CEEEecCCCccchHHHHhhCC-C------------eEEEeeccCCCCc---cc------
Q 014603 122 AIEVILTVLAR-------PG-ANILLPRPGFPYYEARATHSH-L------------EVRHFDLLPAKGW---EV------ 171 (422)
Q Consensus 122 a~~~~~~~l~~-------~g-d~Vl~~~~~~~~~~~~~~~~g-~------------~~~~~~~~~~~~~---~~------ 171 (422)
|++.+++.... ++ .+|+....+||+....+.... . .+..++.....+. ..
T Consensus 102 Ave~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (443)
T PRK07483 102 AVEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYAYREQRAGESDEAYG 181 (443)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCccccccccCCCHHHHH
Confidence 99999875431 23 579999999998754333221 1 1111211100000 00
Q ss_pred --CHHHHHHhhc---CCceEEEEeCCCC--Cccc-ccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCC
Q 014603 172 --DLDAVEALAD---ENTVALVIINPGN--PCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS 243 (422)
Q Consensus 172 --d~~~l~~~~~---~~~~~i~i~~p~n--ptG~-~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~ 243 (422)
.++.+++.+. .+..+.++..|-. ..|. .+|++.++++.++|++||+++|.||++.++.++|... ....++.
T Consensus 182 ~~~~~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~~-a~~~~gv 260 (443)
T PRK07483 182 QRLADELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTGTLF-ACEEDGV 260 (443)
T ss_pred HHHHHHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCcHHH-HHhhcCC
Confidence 0245565443 2455667777743 2354 5678889999999999999999999999987777532 2223333
Q ss_pred CCCeEEEecCccccCCCCc-eeEEEEeeCCCCcccchhHHHHHHhh-----hhhccCcchHHHHHHHHHHhhchH-HHHH
Q 014603 244 IVPVLTLGSISKRWIVPGW-RLGWLVTSDPNGILQDSGIVDSIKSF-----LNISSDPATFIQGAVPQILEKTEE-EFFS 316 (422)
Q Consensus 244 ~~~~i~i~s~sK~~~~~G~-r~G~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~a~~~~l~~~~~-~~~~ 316 (422)
.+++++ ++|.+ ..|. ++|.++++ +++.+.+... ...+.+.++++.+++.+.|+...+ ..++
T Consensus 261 ~PDiv~---~gK~l-~gG~~Pi~av~~~--------~~i~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~l~~i~~~~l~~ 328 (443)
T PRK07483 261 APDLVT---IAKGL-GAGYQPIGAVLAS--------DRIYDAIADGSGFFQHGHTYLGHATACAAALAVQRVIAEDGLLA 328 (443)
T ss_pred CCCeee---ehhhh-ccCccccEEEEEc--------HHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhcCHHH
Confidence 334444 47995 6685 99999986 4677766532 223557789999999999886443 2233
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCccc--ccCCC----CHHHHHHHHHHhcCeEEecCCCC--C
Q 014603 317 KITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSL--LEGIN----SDMEFALKLAKEESVIVLPGITV--G 388 (422)
Q Consensus 317 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~----~~~~~~~~l~~~~gi~v~~g~~~--~ 388 (422)
+..+.-...++.+.+.+++.|.+. . ...-|.++.+.+.... ..... ....+... +.++|+++.+.... +
T Consensus 329 ~~~~~g~~l~~~L~~l~~~~~~i~-~-vRG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Gll~~~~~~~~~~ 405 (443)
T PRK07483 329 NVRARGEQLRARLRERLGQHPHVG-D-IRGRGLFVGVELVADRATKAPFDPALKLHARIKRE-AMARGLMVYPMGGTIDG 405 (443)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCee-e-EeecccEEEEEEeecccccCCCCchhhHHHHHHHH-HHHCCcEEEecCccccC
Confidence 333323333333433334444332 1 2334666666663210 00000 01234444 45679999874321 1
Q ss_pred -CCCeEEEEec--cChHHHHHHHHHHHHHHHHhcc
Q 014603 389 -LKDWLRITFA--VEPSALEDGLGRMKAFYDRHAK 420 (422)
Q Consensus 389 -~~~~iRis~~--~~~~~l~~~~~~l~~~~~~~~~ 420 (422)
..+.+|+.+. .+++++++++++|++++.+...
T Consensus 406 ~~~~~l~~~PpL~it~~eid~~~~~l~~~l~~~~~ 440 (443)
T PRK07483 406 VRGDHVLLAPPFIITAAQIDEIVERLGDAIDAALA 440 (443)
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 1478999987 7899999999999999987643
No 294
>PRK07481 hypothetical protein; Provisional
Probab=99.88 E-value=4.1e-19 Score=170.35 Aligned_cols=351 Identities=15% Similarity=0.129 Sum_probs=212.2
Q ss_pred cCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHH
Q 014603 42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ 121 (422)
Q Consensus 42 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 121 (422)
.+|+.+|||..|......+ ..+|++.+++.+++.+....... .....+.+..+++.|.+..+ +...+.++|+++|++
T Consensus 39 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~Ai~~ql~~~~~~~~~-~~~~~~~~~~lae~L~~~~~-~~~~~~v~f~~sGsE 115 (449)
T PRK07481 39 IDGKKLLDGVGGLWNVNVG-HNREEVKEAIVRQLDELEYYSTF-DGTTHPRAIELSYELIDMFA-PEGMRRVFFSSGGSD 115 (449)
T ss_pred CCCCEEEECchhHHhhcCC-CCCHHHHHHHHHHHHhccceecc-cccCCHHHHHHHHHHHHhcC-CCCCCEEEEcCchHH
Confidence 4789999998876543222 45789999999998763221100 01112444455555554332 113468999999999
Q ss_pred HHHHHHHHhcC-------CC-CEEEecCCCccchHHHHhhCCC-------------eEEEeeccCC--CCcc-cCHHH--
Q 014603 122 AIEVILTVLAR-------PG-ANILLPRPGFPYYEARATHSHL-------------EVRHFDLLPA--KGWE-VDLDA-- 175 (422)
Q Consensus 122 a~~~~~~~l~~-------~g-d~Vl~~~~~~~~~~~~~~~~g~-------------~~~~~~~~~~--~~~~-~d~~~-- 175 (422)
|++.+++.... +| .+|+....+||++...+..... ++..++.... ..+. .|++.
T Consensus 116 Ave~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~ 195 (449)
T PRK07481 116 SVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPEELA 195 (449)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCcccccccCCCCHHHHH
Confidence 99999886431 23 5799999999987544332211 1111211100 0011 13333
Q ss_pred ------HHHhhc---CCceEEEEeCC-CCCccc-ccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCC
Q 014603 176 ------VEALAD---ENTVALVIINP-GNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSI 244 (422)
Q Consensus 176 ------l~~~~~---~~~~~i~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~ 244 (422)
+++.+. ++..+.++..| +...|. .++.+.++++.++|++||+++|.||++.++.++|.... ...++..
T Consensus 196 ~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a-~~~~gv~ 274 (449)
T PRK07481 196 RICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTGSWFG-SRGWGVK 274 (449)
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCchhhH-hhhcCCC
Confidence 333332 24456677777 555666 46778899999999999999999999999877765321 2233333
Q ss_pred CCeEEEecCccccCCCC-ceeEEEEeeCCCCcccchhHHHHHHhh--------hhhccCcchHHHHHHHHHHhhchHHHH
Q 014603 245 VPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKSF--------LNISSDPATFIQGAVPQILEKTEEEFF 315 (422)
Q Consensus 245 ~~~i~i~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~a~~~~l~~~~~~~~ 315 (422)
++++++ +|.+ ..| +++|.++++ +++++.+... ...+.+.++++++++.+.|+...++
T Consensus 275 PDiv~~---gKgl-~gG~~Pi~av~~~--------~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~l~~~-- 340 (449)
T PRK07481 275 PDIMCL---AKGI-TSGYVPLGATMVN--------ARIADAFEANADFGGAIMHGYTYSGHPVACAAALATLDIVVRE-- 340 (449)
T ss_pred CCEEEE---eecc-cCCCcCceEEEEc--------HHHHHHHhccCccccccccCCCCCCCHHHHHHHHHHHHHHHhh--
Confidence 444444 7995 557 599999986 4677766531 2234567899999999998864422
Q ss_pred HHHHHHHHHHHHHHHHHhhc----CCCCCCCCCCCCceEEEEecCccc-ccCCC-----CHHHHHHHHHHhcCeEEecCC
Q 014603 316 SKITDILRETADICCDRLKE----IPCITCPKKPEGSMFVMVKLNYSL-LEGIN-----SDMEFALKLAKEESVIVLPGI 385 (422)
Q Consensus 316 ~~~~~~~~~~~~~l~~~L~~----~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~-----~~~~~~~~l~~~~gi~v~~g~ 385 (422)
+..+++++.-+++.+.|++ +|.+. . ...-|.++.+.+.... ..... ....+... +.++||++.+..
T Consensus 341 -~l~~~~~~~g~~l~~~L~~l~~~~~~i~-~-vrG~Glm~gi~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~Gvl~~~~g 416 (449)
T PRK07481 341 -DLPANAAKRGAYLLEGLQPLKERFELVG-D-VRGKGLMLALDLVADKATREPIDPSKGYANAVADV-ARENGVLVRPSG 416 (449)
T ss_pred -hHHHHHHHHHHHHHHHHHHHhhcCCCeE-E-EeecceEEEEEecccccccCCCCchhHHHHHHHHH-HHhCCeEEEecC
Confidence 2233344444444444443 33222 1 2233667667663210 00000 11233343 456799998742
Q ss_pred CCCCCCeEEEEec--cChHHHHHHHHHHHHHHHHhc
Q 014603 386 TVGLKDWLRITFA--VEPSALEDGLGRMKAFYDRHA 419 (422)
Q Consensus 386 ~~~~~~~iRis~~--~~~~~l~~~~~~l~~~~~~~~ 419 (422)
+.+|+++. .++++|+++++++.++++++.
T Consensus 417 -----~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~ 447 (449)
T PRK07481 417 -----TKIILSPPLVIQREDVDRIVDALDAGLSAVP 447 (449)
T ss_pred -----CEEEEECCCCCCHHHHHHHHHHHHHHHHhcc
Confidence 45899976 699999999999999998764
No 295
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.88 E-value=2.2e-19 Score=153.45 Aligned_cols=320 Identities=15% Similarity=0.098 Sum_probs=229.3
Q ss_pred CCcHHHHHHHHHHhhCCCCCCCCC---CCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEE
Q 014603 62 RTASVAVDAIVHSVRSARFNCYSS---TVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANIL 138 (422)
Q Consensus 62 ~~~~~v~~a~~~~~~~~~~~~y~~---~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl 138 (422)
..++.|++|+..... .|.. .+.+.++++-+..-++ ..++.-.++..+|+.++++++..++.|||.|+
T Consensus 27 nl~~~V~~A~~~~~l-----gh~sPe~~qIm~~v~egikyVFk-----T~n~~tf~isgsGh~g~E~al~N~lePgd~vL 96 (385)
T KOG2862|consen 27 NLSGRVQEAMSRPSL-----GHMSPEFVQIMDEVLEGIKYVFK-----TANAQTFVISGSGHSGWEAALVNLLEPGDNVL 96 (385)
T ss_pred CCCHHHHHhhcCCcc-----ccCCHHHHHHHHHHHHHHHHHhc-----cCCCceEEEecCCcchHHHHHHhhcCCCCeEE
Confidence 346777777665432 2222 1234455555555553 23445677888899999999999999999999
Q ss_pred ecCCCccc--hHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC-CceEEEEeCCCCCcccccCHHH-HHHHHHHHHH
Q 014603 139 LPRPGFPY--YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE-NTVALVIINPGNPCGNVYTYQH-LQKIAETAKK 214 (422)
Q Consensus 139 ~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~i~~p~nptG~~~~~~~-l~~i~~~~~~ 214 (422)
+...+-++ +.+.+++.|+++..++.+. +..+.++.+.+.+.+ +++++++++....||+. ++ ++.+.++|++
T Consensus 97 v~~~G~wg~ra~D~~~r~ga~V~~v~~~~--G~~~~le~i~~~lsqh~p~~vfv~hgdsSTgV~---q~~~~~~g~lc~k 171 (385)
T KOG2862|consen 97 VVSTGTWGQRAADCARRYGAEVDVVEADI--GQAVPLEEITEKLSQHKPKAVFVTHGDSSTGVL---QDLLAISGELCHK 171 (385)
T ss_pred EEEechHHHHHHHHHHhhCceeeEEecCc--ccCccHHHHHHHHHhcCCceEEEEecCcccccc---chHHHHHHHHhhc
Confidence 87766544 4678889999999997654 446899999988765 57888999999999999 56 6777889999
Q ss_pred cCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCC-CCceeEEEEeeCCCCcccchhHHHHHHhhhh---
Q 014603 215 LGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIV-PGWRLGWLVTSDPNGILQDSGIVDSIKSFLN--- 290 (422)
Q Consensus 215 ~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~-~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~--- 290 (422)
|++++++|.+.+. |.....+.+++.| +......|.+++ +| ++.+..++ ...++++..+.
T Consensus 172 ~~~lllVD~VaSl----ggt~F~mDewgVD---vaytgSQKaL~aP~G--LsiisfS~--------ka~~~~~~rK~~~~ 234 (385)
T KOG2862|consen 172 HEALLLVDTVASL----GGTEFEMDEWGVD---VAYTGSQKALGAPAG--LSIISFSD--------KALEAIRDRKTKPV 234 (385)
T ss_pred CCeEEEEechhhc----CCccceehhhccc---EEEecchhhcCCCCC--cceeecCH--------HHHHHHhhccCCce
Confidence 9999999999875 2222234444444 555566798865 45 44465543 34444543211
Q ss_pred ---------------------hccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC---CC
Q 014603 291 ---------------------ISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKK---PE 346 (422)
Q Consensus 291 ---------------------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~---~~ 346 (422)
+..+++....+.+.++|....++++++.+++.++..+.++..|+++ |++.... +.
T Consensus 235 ~~yFd~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~-GLq~fv~~e~~r 313 (385)
T KOG2862|consen 235 SFYFDILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALALIAEEGLENSWRRHREMSKWLKLSLEAL-GLQLFVVDEELR 313 (385)
T ss_pred EEEEeHHhhcchhccCCcccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CccceecChhhc
Confidence 2347777788899999988778999999999999999999999997 5442211 12
Q ss_pred CceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec---cChHHHHHHHHHHHHHHHHhc
Q 014603 347 GSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA---VEPSALEDGLGRMKAFYDRHA 419 (422)
Q Consensus 347 ~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~---~~~~~l~~~~~~l~~~~~~~~ 419 (422)
......+..|.. .|..+++.++..++++.+..|.....+..+||.+. -+.+.++..++.|..++.+..
T Consensus 314 lptvttv~vp~g-----vDw~dVv~~~~~~~~vei~gglg~~~gKv~RIGl~gcna~~e~i~~v~~ll~~alq~~~ 384 (385)
T KOG2862|consen 314 LPTVTTVKVPYG-----VDWKDVVAYAMSHYVVEIGGGLGPTVGKVFRIGLLGCNANVEYIDNVVELLKLALQRKK 384 (385)
T ss_pred cCcceeeecCCC-----CCHHHHHHHHHHhcCEEeccccCCCcccEEEEEEeeccCCcHHHHHHHHHHHHHHhhcc
Confidence 222333444433 37889999988888999988887777899999985 357899999999999886643
No 296
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.87 E-value=1.3e-19 Score=174.14 Aligned_cols=348 Identities=13% Similarity=0.058 Sum_probs=215.3
Q ss_pred cCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHH
Q 014603 42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ 121 (422)
Q Consensus 42 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 121 (422)
.+|+.++||..|......+ ..+|++.+++.+++.+..... ......+.+..+++.|.... +...+.++|+++|++
T Consensus 44 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~Ai~~ql~~l~~~~--~~~~~~~~~~~lae~L~~~~--p~~~~~v~f~~sGsE 118 (466)
T PRK07030 44 FEGKRYLDAVSSWWVNVFG-HANPRINQRIKDQVDQLEHVI--LAGFSHEPVIELSERLVKIT--PPGLSRCFYADNGSS 118 (466)
T ss_pred CCCCEEEEcchhHHhhcCC-CCCHHHHHHHHHHHHhcCCcc--ccccCCHHHHHHHHHHHHhC--CCCcCEEEEeCCcHH
Confidence 4789999998886543223 457899999999997632111 10112234444555554422 223468999999999
Q ss_pred HHHHHHHHhc------C-C-CCEEEecCCCccchHHHHhhCCCe-------------EEEeeccCCC--Ccc--------
Q 014603 122 AIEVILTVLA------R-P-GANILLPRPGFPYYEARATHSHLE-------------VRHFDLLPAK--GWE-------- 170 (422)
Q Consensus 122 a~~~~~~~l~------~-~-gd~Vl~~~~~~~~~~~~~~~~g~~-------------~~~~~~~~~~--~~~-------- 170 (422)
|++.+++... . + ..+|+....+||+....+...+.. +..+|..... .++
T Consensus 119 Ave~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~ 198 (466)
T PRK07030 119 AIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSR 198 (466)
T ss_pred HHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCccccccCCCHHHHHH
Confidence 9999988652 1 2 357999999999875444332111 1112211000 000
Q ss_pred cCHHHHHHhhc--CCceEEEEeCC--CCCccc-ccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCC
Q 014603 171 VDLDAVEALAD--ENTVALVIINP--GNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIV 245 (422)
Q Consensus 171 ~d~~~l~~~~~--~~~~~i~i~~p--~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~ 245 (422)
-+++.+++.+. .+..+.+|..| +...|. .+|++.++++.++|++||+++|.||++.++.++|... ....++..+
T Consensus 199 ~~l~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG~~~-a~~~~gv~P 277 (466)
T PRK07030 199 RMFAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGTMF-ACEQAGIRP 277 (466)
T ss_pred HHHHHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCccccch-HHHhcCCCC
Confidence 12445666664 24556667777 455566 5677889999999999999999999999987777532 223334444
Q ss_pred CeEEEecCccccCCCC-ceeEEEEeeCCCCcccchhHHHHHHh--------hhhhccCcchHHHHHHHHHHhhchHHHHH
Q 014603 246 PVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKS--------FLNISSDPATFIQGAVPQILEKTEEEFFS 316 (422)
Q Consensus 246 ~~i~i~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~a~~~~l~~~~~~~~~ 316 (422)
+++++ +|.+ ..| +++|.++++ +++++.+.. ....+.+.++++++++.+.|+...++.
T Consensus 278 Div~~---gKgl-~gG~~Pi~av~~~--------~ei~~~~~~~~~~~~~~~h~~T~~gnpla~aaa~a~L~~i~~~~-- 343 (466)
T PRK07030 278 DFLCL---SKAL-TGGYLPLAAVLTT--------DTVYQAFYDDYPTLRAFLHSHSYTGNPLACAAALATLDIFEQDN-- 343 (466)
T ss_pred CEEee---ehhc-cCCcccceEEEec--------HHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHhcC--
Confidence 44444 6995 568 599999986 467776642 122345678999999999988654322
Q ss_pred HHHHHHHHHHHHHHHHhhc---CCCCCCCCCCCCceEEEEecCcccc--cCC-CC---HHHHHHHHHHhcCeEEecCCCC
Q 014603 317 KITDILRETADICCDRLKE---IPCITCPKKPEGSMFVMVKLNYSLL--EGI-NS---DMEFALKLAKEESVIVLPGITV 387 (422)
Q Consensus 317 ~~~~~~~~~~~~l~~~L~~---~~~~~~~~~~~~g~~~~~~~~~~~~--~~~-~~---~~~~~~~l~~~~gi~v~~g~~~ 387 (422)
..++.++.-+++++.|++ .|.+. . ...-|.++.+.+..... ... .+ ...+... +.++|+++.+.
T Consensus 344 -l~~~~~~~G~~l~~~L~~l~~~~~v~-~-vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~-~~~~Gvl~~~~--- 416 (466)
T PRK07030 344 -VIENNRALARRMAEATAHLADHPHVA-E-VRQTGMILAIEMVQDKASKTPYPWQERRGLKVYQH-ALERGALLRPL--- 416 (466)
T ss_pred -HHHHHHHHHHHHHHHHHHHhcCCCEE-E-eEeceeEEEEEeccCccccccCcchhHHHHHHHHH-HHHCCeEEEec---
Confidence 334444444444444443 33332 1 23346677776632110 000 00 1234444 45679999763
Q ss_pred CCCCeEEEEec--cChHHHHHHHHHHHHHHHHh
Q 014603 388 GLKDWLRITFA--VEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 388 ~~~~~iRis~~--~~~~~l~~~~~~l~~~~~~~ 418 (422)
.+.+|+.++ +++++|+++++++++++++.
T Consensus 417 --g~~i~~~Ppl~it~~eid~~~~~l~~al~~~ 447 (466)
T PRK07030 417 --GSVVYFLPPYVITPEQIDFLAEVASEGIDIA 447 (466)
T ss_pred --CCEEEEECCccCCHHHHHHHHHHHHHHHHHH
Confidence 257899876 78999999999999999876
No 297
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.87 E-value=3.7e-19 Score=165.58 Aligned_cols=289 Identities=21% Similarity=0.240 Sum_probs=193.7
Q ss_pred CCCCCC--CCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHh----hC
Q 014603 81 NCYSST--VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARAT----HS 154 (422)
Q Consensus 81 ~~y~~~--~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~----~~ 154 (422)
..|... +....++++++++- ..+.++++++|++|+..++.+++++||+|+++...|.+....++ ..
T Consensus 47 ~~Y~R~gnPt~~~le~~la~Le--------~g~~a~~~~SGmaAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~~~~~l~~~ 118 (386)
T PF01053_consen 47 YIYSRYGNPTVRALEQRLAALE--------GGEDALLFSSGMAAISAALLALLKPGDHIVASDDLYGGTYRLLEELLPRF 118 (386)
T ss_dssp CSBTTTC-HHHHHHHHHHHHHH--------T-SEEEEESSHHHHHHHHHHHHS-TTBEEEEESSSSHHHHHHHHHCHHHT
T ss_pred cceeccccccHHHHHHHHHHhh--------cccceeeccchHHHHHHHHHhhcccCCceEecCCccCcchhhhhhhhccc
Confidence 455542 23456777777776 33678999999999999999999999999999999988765544 36
Q ss_pred CCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcC-cEEEEcccccccccCCC
Q 014603 155 HLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLG-IMVIADEVYDHLAFGNT 233 (422)
Q Consensus 155 g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~-~~li~D~~~~~~~~~~~ 233 (422)
|+++..++. -|+++|++.++++++++++..|.||+..+ .|+++|+++|+++| +++++|..+....
T Consensus 119 gv~v~~~d~-------~d~~~l~~~l~~~t~~v~~EspsNP~l~v---~Dl~~i~~~a~~~g~~~~vVDnT~atp~---- 184 (386)
T PF01053_consen 119 GVEVTFVDP-------TDLEALEAALRPNTKLVFLESPSNPTLEV---PDLEAIAKLAKEHGDILVVVDNTFATPY---- 184 (386)
T ss_dssp TSEEEEEST-------TSHHHHHHHHCTTEEEEEEESSBTTTTB------HHHHHHHHHHTTT-EEEEECTTTHTT----
T ss_pred CcEEEEeCc-------hhHHHHHhhccccceEEEEEcCCCccccc---ccHHHHHHHHHHhCCceEEeecccccee----
Confidence 888776642 38899999999999999999999999888 68999999999998 9999999986521
Q ss_pred CCCCccccCCCCCeEEEecCccccCCCCce-eEEEEeeCCCCcccchhHHHHHHhhhh-hccCcchHHHHHHHHHHhhch
Q 014603 234 PFVPMGVFGSIVPVLTLGSISKRWIVPGWR-LGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQGAVPQILEKTE 311 (422)
Q Consensus 234 ~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r-~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~ 311 (422)
...+ ..++.| +++.|.+|.+++.|-- .|.+++++ .+++.++++.... .....++...+.+..-|+.
T Consensus 185 ~~~p-L~~GaD---ivv~S~TKyl~Ghsdv~~G~vv~~~------~~~~~~~l~~~~~~~G~~~~p~da~ll~rgl~T-- 252 (386)
T PF01053_consen 185 NQNP-LELGAD---IVVHSATKYLSGHSDVMGGAVVVNG------SSELYDRLREFRRLLGATLSPFDAWLLLRGLRT-- 252 (386)
T ss_dssp TC-G-GGGT-S---EEEEETTTTTTTSSSE-EEEEEESS------HHHHHHHHHHHHHHHT-B--HHHHHHHHHHHTT--
T ss_pred eecc-CcCCce---EEEeeccccccCCcceeeEEEEECc------hhhhhhhhcchhhhcCccchHHHHHHHhcCCCc--
Confidence 1112 223444 9999999998655533 56666543 1356666665543 3345666777776666765
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC----------------CCceEEEEecCcccccCCCCHHHHHHHHHH
Q 014603 312 EEFFSKITDILRETADICCDRLKEIPCITCPKKP----------------EGSMFVMVKLNYSLLEGINSDMEFALKLAK 375 (422)
Q Consensus 312 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~----------------~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~ 375 (422)
+.-+.++..++...+.+.|+++|.+.-+.+| ..|..+.+.++.. .+.+..+++
T Consensus 253 ---l~~R~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~~--------~~~~~~f~~ 321 (386)
T PF01053_consen 253 ---LPLRMERQNENAEALAEFLEEHPKVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKGG--------EEAARRFLD 321 (386)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHHTSTTEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESSH--------HHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHHHHHHHHhCCCCCeEEEcccccccceeeeeecccccCceeEEEeccc--------hhhhHhHHh
Confidence 6777888889999999999998776534344 2334666777642 233344444
Q ss_pred hcCeE-EecC--CCC----------------------CC-CCeEEEEeccChHHHHHHHHHHHHHHH
Q 014603 376 EESVI-VLPG--ITV----------------------GL-KDWLRITFAVEPSALEDGLGRMKAFYD 416 (422)
Q Consensus 376 ~~gi~-v~~g--~~~----------------------~~-~~~iRis~~~~~~~l~~~~~~l~~~~~ 416 (422)
+-.+. ..+. ... +. ++.||+|++. |+.+.+++.|+++++
T Consensus 322 ~l~l~~~~~SlGg~~SLi~~p~~~~h~~~~~e~~~~~Gi~~~liRlSvGl--Ed~~dLi~Dl~~AL~ 386 (386)
T PF01053_consen 322 ALKLFSIAPSLGGVESLISHPASTSHRSLSPEERAEAGISDGLIRLSVGL--EDPDDLIADLEQALE 386 (386)
T ss_dssp H-SSSEESSS-SSSS-EEEETTCTTTTTSCHHHHHHTTS-TTEEEEE--S--S-HHHHHHHHHHHHH
T ss_pred hhhhHhhhhhcCCcccccccccchhhccCChhhhhccCCCCCeeEEEecc--CCHHHHHHHHHHhcC
Confidence 44443 1111 110 01 4689999997 567778888888774
No 298
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.87 E-value=1.3e-19 Score=184.16 Aligned_cols=301 Identities=12% Similarity=0.076 Sum_probs=211.7
Q ss_pred CHHHHHHHHHHHhhcCCCCCCCCCEEEecCHH----HHHHHHHHHhcCC-CC----EEEecCCCccchHHHHhhCCCeEE
Q 014603 89 ILPARRAIADYLNRDLPYKLSPDDVYLTLGCT----QAIEVILTVLARP-GA----NILLPRPGFPYYEARATHSHLEVR 159 (422)
Q Consensus 89 ~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~----~a~~~~~~~l~~~-gd----~Vl~~~~~~~~~~~~~~~~g~~~~ 159 (422)
+.++|+.+++++ ..+.|.|+++++ ++++.+++++.++ || .|+++...|......+...|++++
T Consensus 570 ~~~~r~~la~i~--------g~~~v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~a~~~G~~vv 641 (993)
T PLN02414 570 FEDLGDLLCEIT--------GFDSFSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPASAAMCGMKIV 641 (993)
T ss_pred HHHHHHHHHHHh--------CCCeEEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHHHHHHCCCEEE
Confidence 456777777777 238999999998 8999999998765 87 899999999988888888999999
Q ss_pred EeeccCCCCcccCHHHHHHhhcC---CceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCC
Q 014603 160 HFDLLPAKGWEVDLDAVEALADE---NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFV 236 (422)
Q Consensus 160 ~~~~~~~~~~~~d~~~l~~~~~~---~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~ 236 (422)
.++.+. ++.+|+++|++.+++ +++++++++|+|-+|.. +++++|+++|+++|+++++|.++..... ...
T Consensus 642 ~v~~d~--~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e---~~I~eI~~iah~~Galv~vDgAq~~a~~---~l~ 713 (993)
T PLN02414 642 VVGTDA--KGNINIEELRKAAEAHKDNLAALMVTYPSTHGVYE---EGIDEICDIIHDNGGQVYMDGANMNAQV---GLT 713 (993)
T ss_pred EeccCC--CCCcCHHHHHHHHhccCCCeEEEEEECCCcccccc---chHHHHHHHHHHcCCEEEEEecCHHhcc---CcC
Confidence 999853 346999999999984 67899999999999988 6799999999999999999999965211 222
Q ss_pred CccccCCCCCeEEEecCccccCC----CCceeEEEEeeCCCCcccchhHHHHHHhh------------h-hhccC-----
Q 014603 237 PMGVFGSIVPVLTLGSISKRWIV----PGWRLGWLVTSDPNGILQDSGIVDSIKSF------------L-NISSD----- 294 (422)
Q Consensus 237 ~~~~~~~~~~~i~i~s~sK~~~~----~G~r~G~~~~~~~~~~~~~~~~~~~~~~~------------~-~~~~~----- 294 (422)
....++.| ++++|.+|+|+. .|..+|++.+.. .+...+... . ...++
T Consensus 714 ~p~~~GaD---~~~~s~HK~f~~P~G~GGPg~G~l~~~~--------~L~p~lPg~~v~~~~~~~~r~~~s~iGt~~~a~ 782 (993)
T PLN02414 714 SPGFIGAD---VCHLNLHKTFCIPHGGGGPGMGPIGVKK--------HLAPFLPSHPVVPTGGIPRPEKTQPLGTISAAP 782 (993)
T ss_pred CccccCCC---EEEecCCccCCcCcccCCCCeeeEEEch--------hhcccCCCCccccCCCcccccCCCCcCCccchh
Confidence 34455655 888999997753 346689987753 222222110 1 00112
Q ss_pred -cchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceE--EEEecCcccccCCCCHHHHHH
Q 014603 295 -PATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMF--VMVKLNYSLLEGINSDMEFAL 371 (422)
Q Consensus 295 -~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~ 371 (422)
.+.+...++..++.....+++.+..++...+.++++++|++..++. ...|.+.++ +.+.++........+..++..
T Consensus 783 ~g~al~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~~~~~~-~~~~~~~~~hEfv~~~~~l~~~~g~~~~di~k 861 (993)
T PLN02414 783 WGSALILPISYTYIAMMGSEGLTDASKIAILNANYMAKRLEGHYPVL-FRGKNGTCAHEFIIDLRPFKNTAGIEPEDVAK 861 (993)
T ss_pred hhhHHHHHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHhhCCcc-ccCCCCCeeeeEEEeccccccccCCCHHHHHH
Confidence 1113333444455554567888888889999999999998754444 223332211 112333110000124677888
Q ss_pred HHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHHHHHHHHHhc
Q 014603 372 KLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGRMKAFYDRHA 419 (422)
Q Consensus 372 ~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~l~~~~~~~~ 419 (422)
+|+ ++|+.... ..|...+.+||+++ .+++|||++++.+..+..+..
T Consensus 862 rL~-d~Gihapt-~~~pv~~~lmiepTE~~skeelDrf~~al~~i~~e~~ 909 (993)
T PLN02414 862 RLM-DYGFHAPT-MSWPVPGTLMIEPTESESKAELDRFCDALISIREEIA 909 (993)
T ss_pred HHH-HcCcEEee-eccccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHH
Confidence 876 77998654 33445789999998 688999999999998877654
No 299
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.87 E-value=1.3e-18 Score=165.99 Aligned_cols=328 Identities=16% Similarity=0.169 Sum_probs=204.3
Q ss_pred CceeecCCCCCCCCC-CCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHH
Q 014603 46 PLIPLGHGDPSAFPS-FRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIE 124 (422)
Q Consensus 46 ~~i~l~~g~~~~~~~-~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~ 124 (422)
....|+.|.+..... ...++.-.+++.+.+..... .+++ ...++++.++++++ .+++++++||++++.
T Consensus 24 ~~~~~~~~~~~ip~~~~~~~~~~~~a~~~~~~~~~~-~~G~--~~~~fe~~lA~~~g--------~~~~v~~~sGt~al~ 92 (438)
T PRK15407 24 APKPFVPGKSPIPPSGKVIDAKELQNLVDASLDFWL-TTGR--FNDAFEKKLAEFLG--------VRYALLVNSGSSANL 92 (438)
T ss_pred ccccccCCCCCCCcCccCCCHHHHHHHHHHHHhCcc-cCCh--hHHHHHHHHHHHhC--------CCeEEEECCHHHHHH
Confidence 344567777642111 11223333444454443222 2333 35899999999993 347999999999999
Q ss_pred HHHHHh---------cCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCC
Q 014603 125 VILTVL---------ARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNP 195 (422)
Q Consensus 125 ~~~~~l---------~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~np 195 (422)
.++.++ +++||+|+++.++|..+...+...|..++.+++++ .++.+|++.+++.+++++++++++++
T Consensus 93 ~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~~~G~~pv~vdvd~-~~~~id~~~le~~i~~~tkaVi~~~~--- 168 (438)
T PRK15407 93 LAFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPIIQNGLVPVFVDVEL-PTYNIDASLLEAAVSPKTKAIMIAHT--- 168 (438)
T ss_pred HHHHHHhhccccccCCCCCCEEEECCCCcHHHHHHHHHcCCEEEEEecCC-CcCCcCHHHHHHHcCcCCeEEEEeCC---
Confidence 998876 47899999999999999988889999999988764 45778999999999889999998875
Q ss_pred cccccCHHHHHHHHHHHHHcCcEEEEcccccccc-cCCCCCCCccccCCCCCeEEEecCc--cccCCCCceeEEEEeeCC
Q 014603 196 CGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLA-FGNTPFVPMGVFGSIVPVLTLGSIS--KRWIVPGWRLGWLVTSDP 272 (422)
Q Consensus 196 tG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~-~~~~~~~~~~~~~~~~~~i~i~s~s--K~~~~~G~r~G~~~~~~~ 272 (422)
+|.. .++++|.++|+++|++||+|++|+... +.|. .+..++ + +.++||+ |.+.. |- -|++++++
T Consensus 169 ~G~p---~dl~~I~~la~~~gi~vIeDaa~a~G~~~~g~---~~G~~g-d---~~~fSf~~~k~~~~-ge-GG~l~t~d- 235 (438)
T PRK15407 169 LGNP---FDLAAVKAFCDKHNLWLIEDNCDALGSTYDGR---MTGTFG-D---IATLSFYPAHHITM-GE-GGAVFTND- 235 (438)
T ss_pred CCCh---hhHHHHHHHHHHCCCEEEEECccchhhhcCCe---eeeccC-c---eEEEeCCCCCCccc-cC-ceEEEECC-
Confidence 4443 578999999999999999999998643 3332 233333 1 5566665 54432 32 38999875
Q ss_pred CCcccchhHHHHHHhhhhhc----------------------------------------cCcchHHHHHHHHHHhhchH
Q 014603 273 NGILQDSGIVDSIKSFLNIS----------------------------------------SDPATFIQGAVPQILEKTEE 312 (422)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~----------------------------------------~~~~~~~~~a~~~~l~~~~~ 312 (422)
+++.++++...... ...+.+..+.+..-|
T Consensus 236 ------~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~rmsel~AAig~~qL----- 304 (438)
T PRK15407 236 ------PLLKKIIESFRDWGRDCWCAPGCDNTCGKRFGWQLGELPFGYDHKYTYSHLGYNLKITDMQAAIGLAQL----- 304 (438)
T ss_pred ------HHHHHHHHHHHHhCcccccccccccccccccccccccccccccccccccccccccCccHHHHHHHHHHH-----
Confidence 45655554433211 011112222222223
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCC-CCCCCCCCCceE----EEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCC-
Q 014603 313 EFFSKITDILRETADICCDRLKEIPC-ITCPKKPEGSMF----VMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGIT- 386 (422)
Q Consensus 313 ~~~~~~~~~~~~~~~~l~~~L~~~~~-~~~~~~~~~g~~----~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~- 386 (422)
..+++..++-+++.+++.+.|+.+++ +.....+.+... +.+.++... + .+..++...| +++||...+...
T Consensus 305 ~~l~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~-~~Rd~l~~~L-~~~GI~~~~~~~~ 380 (438)
T PRK15407 305 EKLPGFIEARKANFAYLKEGLASLEDFLILPEATPNSDPSWFGFPITVKEDA--G-FTRVELVKYL-EENKIGTRLLFAG 380 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCccccCcCCCCCeeEEEEEEEEECCcC--C-CCHHHHHHHH-HHCCCCccccCCC
Confidence 33666777777788888888888764 322222222211 222333210 1 1345666655 667997654221
Q ss_pred -CCC----------------------CCeEEEEec--cChHHHHHHHHHHHHHHH
Q 014603 387 -VGL----------------------KDWLRITFA--VEPSALEDGLGRMKAFYD 416 (422)
Q Consensus 387 -~~~----------------------~~~iRis~~--~~~~~l~~~~~~l~~~~~ 416 (422)
+.. ...+-+-+. .++++++..++.|+++++
T Consensus 381 ~~~~~p~~~~~~~~~~~~~P~ae~~~~~~l~LP~~~~l~~~~v~~i~~~i~~~~~ 435 (438)
T PRK15407 381 NLTRQPYFKGVKYRVVGELTNTDRIMNDTFWIGVYPGLTEEMLDYVIEKIEEFFG 435 (438)
T ss_pred ccccChhhhhcCCCCCCCChHHHHHHhCeEEecCCCCCCHHHHHHHHHHHHHHHh
Confidence 000 112222222 478999999999998875
No 300
>PRK06917 hypothetical protein; Provisional
Probab=99.87 E-value=4.8e-19 Score=169.59 Aligned_cols=355 Identities=15% Similarity=0.142 Sum_probs=216.3
Q ss_pred cCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHH
Q 014603 42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ 121 (422)
Q Consensus 42 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 121 (422)
.+|+.+|||..|......+ ..+|.|.+++.+++..... .+.. ....+.+..+++.|....+ ...+.++|+++|++
T Consensus 28 ~dG~~ylD~~~g~~~~~lG-h~hp~v~~Ai~~ql~~~~~-~~~~-~~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGsE 102 (447)
T PRK06917 28 QNGNKYFDGSSGAVTAGIG-HGVKEIADAIKEQAEEVSF-VYRS-QFTSEPAEKLAKKLSDLSP--GDLNWSFFVNSGSE 102 (447)
T ss_pred CCCCEEEECchhHHhccCC-CCCHHHHHHHHHHHhhCcC-cccc-ccCCHHHHHHHHHHHHhCC--CCCCEEEEeCChHH
Confidence 3789999998886443222 4579999999999986321 1111 1112444455555554322 23358999999999
Q ss_pred HHHHHHHHhcC-------CC-CEEEecCCCccchHHHHhhC-CC------------eEEEeeccCCCC--ccc-------
Q 014603 122 AIEVILTVLAR-------PG-ANILLPRPGFPYYEARATHS-HL------------EVRHFDLLPAKG--WEV------- 171 (422)
Q Consensus 122 a~~~~~~~l~~-------~g-d~Vl~~~~~~~~~~~~~~~~-g~------------~~~~~~~~~~~~--~~~------- 171 (422)
|++.+++.... +| .+|+....+||++...+... +. .+..++...... +..
T Consensus 103 Ave~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 182 (447)
T PRK06917 103 ANETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQL 182 (447)
T ss_pred HHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccccccCCChHHHHH
Confidence 99999986521 23 68999999999875544321 11 111111100000 000
Q ss_pred -CHHHHHHhhcC---CceEEEEeCC-CC-Cccc-ccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCC
Q 014603 172 -DLDAVEALADE---NTVALVIINP-GN-PCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSI 244 (422)
Q Consensus 172 -d~~~l~~~~~~---~~~~i~i~~p-~n-ptG~-~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~ 244 (422)
+++.+++.++. +..+.++..| .. ..|. .+|++.++++.++|++||+++|+||++.++..+|... ....++..
T Consensus 183 ~~~~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG~~~-a~~~~gv~ 261 (447)
T PRK06917 183 ACATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRTGAMF-AMEHWGVE 261 (447)
T ss_pred HHHHHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCcccchh-hHHhcCCC
Confidence 23455666542 3466677777 33 3444 5678899999999999999999999999877666532 12233333
Q ss_pred CCeEEEecCccccCCCCc-eeEEEEeeCCCCcccchhHHHHHHhh-----hhhccCcchHHHHHHHHHHhhchHHHHHHH
Q 014603 245 VPVLTLGSISKRWIVPGW-RLGWLVTSDPNGILQDSGIVDSIKSF-----LNISSDPATFIQGAVPQILEKTEEEFFSKI 318 (422)
Q Consensus 245 ~~~i~i~s~sK~~~~~G~-r~G~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~ 318 (422)
++++ +++|.+ ..|. ++|.++++ +++++.+... ...+.+.++++.+++.+.|+...++ +.
T Consensus 262 PDi~---~~gK~l-~~G~~Pi~a~~~~--------~~i~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~---~l 326 (447)
T PRK06917 262 PDIM---TLGKGL-GAGYTPIAATVVS--------DRVMEPILRGSRSIMSGHTLSANPLSAATALAVLEYMEKH---NL 326 (447)
T ss_pred CCEE---Eeeehh-ccCCcceEEEEEc--------HHHHHHHhccCcccccccCCCCCHHHHHHHHHHHHHHHHC---CH
Confidence 3333 458995 5675 89999986 4677766532 1234567889999999998864322 23
Q ss_pred HHHHHHHHHHHHHHhhc----CCCCCCCCCCCCceEEEEecCcc-cc-cCCCC----HHHHHHHHHHhcCeEEecCCCC-
Q 014603 319 TDILRETADICCDRLKE----IPCITCPKKPEGSMFVMVKLNYS-LL-EGINS----DMEFALKLAKEESVIVLPGITV- 387 (422)
Q Consensus 319 ~~~~~~~~~~l~~~L~~----~~~~~~~~~~~~g~~~~~~~~~~-~~-~~~~~----~~~~~~~l~~~~gi~v~~g~~~- 387 (422)
.++++++-++|++.|++ .|.+. . ...-|.++.+.+... .. ..... ...+... +.++||++.+...-
T Consensus 327 ~~~~~~~g~~l~~~L~~l~~~~~~i~-~-vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Gvl~~~~~~~~ 403 (447)
T PRK06917 327 PEKAAEKGEYLIKGLQKVQQQSTIIG-D-VRGKGLLIGVEFVADKKTKQPFSKSQAVASELISV-AAKNGLLLYPAVAGQ 403 (447)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCEE-E-EeecceEEEEEEeccCCcCCCCcchhHHHHHHHHH-HHhCCcEEEeccccc
Confidence 34455555555555544 33222 1 223466666666321 00 00001 2234444 45679999875211
Q ss_pred -C-CCCeEEEEec--cChHHHHHHHHHHHHHHHHhcc
Q 014603 388 -G-LKDWLRITFA--VEPSALEDGLGRMKAFYDRHAK 420 (422)
Q Consensus 388 -~-~~~~iRis~~--~~~~~l~~~~~~l~~~~~~~~~ 420 (422)
+ ..+.+|+++. +++++|+++++++.+++++..+
T Consensus 404 ~g~~~~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~~ 440 (447)
T PRK06917 404 DGKEGDAVIIAPPMTITYSELDELLSIFAKSVEEMMQ 440 (447)
T ss_pred CCCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHHHHH
Confidence 1 1478999987 8999999999999999987644
No 301
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.87 E-value=9.3e-20 Score=167.98 Aligned_cols=354 Identities=18% Similarity=0.138 Sum_probs=218.8
Q ss_pred cCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCC--CHHHHHHHHHHHhhcCCCCCCCCCEEEecCH
Q 014603 42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVG--ILPARRAIADYLNRDLPYKLSPDDVYLTLGC 119 (422)
Q Consensus 42 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g--~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~ 119 (422)
.+|+.++|-.+|.-...- -.-.|++.+|+.+|+..-......-... -.+|-+++++.. + +-+-++|+|++||
T Consensus 41 ~~G~r~lDg~sg~W~~~~-Gh~~~~i~~Ai~~Q~~~l~~~~~~~~t~~Pa~~LA~~L~~~a----P-~~~l~~vFf~~sG 114 (449)
T COG0161 41 IDGRRYLDGMSGLWCVNH-GHGRPEIAEAIKKQLDKLPHVMFGGFTHEPAIELAEKLAELA----P-EGGLDHVFFTDSG 114 (449)
T ss_pred CCCCEEEecccHHHHhhc-CcCCHHHHHHHHHHHHhCCchhhcccCCchHHHHHHHHHHhC----C-CCCccEEEEeCCc
Confidence 357777776666422111 2346899999999998632110011111 234555555554 2 1236799999999
Q ss_pred HHHHHHHHHHhc-------CCC-CEEEecCCCccchHHHHhhCCC--------------eEEEeeccC-----C-CCcc-
Q 014603 120 TQAIEVILTVLA-------RPG-ANILLPRPGFPYYEARATHSHL--------------EVRHFDLLP-----A-KGWE- 170 (422)
Q Consensus 120 ~~a~~~~~~~l~-------~~g-d~Vl~~~~~~~~~~~~~~~~g~--------------~~~~~~~~~-----~-~~~~- 170 (422)
++|++.+++... +|. .+++.-..+||+-...+...+. .+..++... . +.+.
T Consensus 115 SeAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~ 194 (449)
T COG0161 115 SEAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDE 194 (449)
T ss_pred hHHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCcccccCCCCCChH
Confidence 999999987643 233 3588889999875333332221 111222111 0 1111
Q ss_pred ---cCHHHHHHhhcC---CceEEEEeCC-CCC-ccc-ccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCcccc
Q 014603 171 ---VDLDAVEALADE---NTVALVIINP-GNP-CGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF 241 (422)
Q Consensus 171 ---~d~~~l~~~~~~---~~~~i~i~~p-~np-tG~-~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~ 241 (422)
-..++|++.+.. ++.+.+|..| ... +|+ ++|+..++++.++|++||+++|.||+-.+++++|+.+. ....
T Consensus 195 ~~~~~a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFGRTG~~FA-~e~~ 273 (449)
T COG0161 195 EFAEAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGRTGKMFA-CEHA 273 (449)
T ss_pred HHHHHHHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCCCcCchhhh-hhhc
Confidence 224566666543 6788888988 344 676 57778899999999999999999999999999987543 2334
Q ss_pred CCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhh------hhhccCcchHHHHHHHHHHhhch-HHH
Q 014603 242 GSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSF------LNISSDPATFIQGAVPQILEKTE-EEF 314 (422)
Q Consensus 242 ~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~a~~~~l~~~~-~~~ 314 (422)
+..++++. ++|.+...=+++|.++++ .++.+.+... +..+.+.++++++++.+.|+..+ +.+
T Consensus 274 gi~PDi~~---~aKGLT~GY~Pl~a~l~~--------~~I~~~~~~~~~~~f~HG~TYsghPlacAaAla~L~i~e~e~l 342 (449)
T COG0161 274 GIVPDILC---LAKGLTGGYLPLSAVLTS--------DRIYEAFSDGDAGAFMHGHTYSGNPLACAAALANLDILEEEDL 342 (449)
T ss_pred CCCCCeee---ecccccccchhhHhHhhh--------HHHHHHHhcccCCeeccCCccccCHHHHHHHHHHHHHHHhcCH
Confidence 44444444 469864444888888876 3677777653 23456889999999999998755 333
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccccC--C-CCHHHHHHHHHHhcCeEEecCCCCCCCC
Q 014603 315 FSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEG--I-NSDMEFALKLAKEESVIVLPGITVGLKD 391 (422)
Q Consensus 315 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--~-~~~~~~~~~l~~~~gi~v~~g~~~~~~~ 391 (422)
+++..+.-....+.|.+.|.+.|.+. - ...-|.+.-+++....... . ......+...+.++|++++|.. +
T Consensus 343 ~~~~~~~~~~l~~~L~~~l~~~p~Vg-d-VR~~Gli~~iElv~d~~t~~~f~~~~~~~~~~~~~e~Gl~iRp~g-----~ 415 (449)
T COG0161 343 LERVAEIGAYLQAGLQAALADHPLVG-D-VRGLGLIGAIELVADKATKTPFEARVGARVRAAALERGLLIRPLG-----D 415 (449)
T ss_pred HHHHHHHHHHHHHHHHHhcccCCcEE-E-eeccceEEEEEEecccccccchhhhHHHHHHHHHHHCCeEEeecC-----C
Confidence 44433333333444443344334433 1 2344677777764321100 0 0123344555667899999972 4
Q ss_pred eEEEEec--cChHHHHHHHHHHHHHHHHhcc
Q 014603 392 WLRITFA--VEPSALEDGLGRMKAFYDRHAK 420 (422)
Q Consensus 392 ~iRis~~--~~~~~l~~~~~~l~~~~~~~~~ 420 (422)
.+=+++. .++++|+++++++++++++..+
T Consensus 416 ~i~~~PPliit~~eid~l~~~l~~al~~~~~ 446 (449)
T COG0161 416 VIYLMPPLIITREEIDELVDALREALDETLA 446 (449)
T ss_pred EEEEcCCccCCHHHHHHHHHHHHHHHHHHHh
Confidence 5666665 7899999999999999987654
No 302
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.87 E-value=1.3e-20 Score=171.79 Aligned_cols=227 Identities=19% Similarity=0.182 Sum_probs=156.9
Q ss_pred CCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeecc
Q 014603 85 STVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLL 164 (422)
Q Consensus 85 ~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~ 164 (422)
|...+.++++.+|++++ . .+.+++++|+++++..++.+++++||+|+++.++|.+....+...|.+++.++..
T Consensus 57 ~~g~i~~~~~~~A~~~g------a-~~~~~~~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~~~~~~~g~~~~~v~~~ 129 (294)
T cd00615 57 PTGPIKEAQELAARAFG------A-KHTFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVINGLVLSGAVPVYLKPE 129 (294)
T ss_pred CChHHHHHHHHHHHHhC------C-CCEEEEcCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHHHHHHHCCCEEEEecCc
Confidence 44557899999999983 2 2345569999999999999999999999999999999888888899998888764
Q ss_pred CCCC----cccCHHHHHHhhc--CCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccc-cccCCCCCCC
Q 014603 165 PAKG----WEVDLDAVEALAD--ENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDH-LAFGNTPFVP 237 (422)
Q Consensus 165 ~~~~----~~~d~~~l~~~~~--~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~-~~~~~~~~~~ 237 (422)
.... ..+|++.+++.++ ++++++++++| |++|.++ ++++|+++|+++|+++|+|++|+. +.+.+..+..
T Consensus 130 ~~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p-~~~G~~~---dl~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~ 205 (294)
T cd00615 130 RNPYYGIAGGIPPETFKKALIEHPDAKAAVITNP-TYYGICY---NLRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSS 205 (294)
T ss_pred cCcccCcCCCCCHHHHHHHHHhCCCceEEEEECC-CCCCEec---CHHHHHHHHHhcCCeEEEECcchhhhccCcccCcc
Confidence 4332 3689999999885 46788999998 7899996 478899999999999999999974 2333322212
Q ss_pred ccccCCCCCeEEEecCccccCCCCceeEEEE-eeCCCCcccchhHHHHHHhhhh--hccCcchHHHHHHHHHHhhchHHH
Q 014603 238 MGVFGSIVPVLTLGSISKRWIVPGWRLGWLV-TSDPNGILQDSGIVDSIKSFLN--ISSDPATFIQGAVPQILEKTEEEF 314 (422)
Q Consensus 238 ~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~~~~l~~~~~~~ 314 (422)
.... +..+++.|++|++ +|++.|+++ .++. .. ...++..... .+++++.....++..+++.....
T Consensus 206 ~~~~---~~div~~S~hK~l--~g~~~~~~l~~~~~--~~----~~~~~~~~~~~~~ttsps~~~~asl~~a~~~~~~~- 273 (294)
T cd00615 206 AAMA---GADIVVQSTHKTL--PALTQGSMIHVKGD--LV----NPDRVNEALNLHQSTSPSYLILASLDVARAMMALE- 273 (294)
T ss_pred hhhc---CCcEEEEchhccc--chHhHHHHHHhCCC--cC----CHHHHHHHHHHHCCCCcHHHHHHHHHHHHHHHHHH-
Confidence 2122 2349999999984 667665544 4321 11 1223332222 23466666666666666542212
Q ss_pred HHHHHHHHHHHHHHHHHHhh
Q 014603 315 FSKITDILRETADICCDRLK 334 (422)
Q Consensus 315 ~~~~~~~~~~~~~~l~~~L~ 334 (422)
-.+..+++.++.+.+++.|.
T Consensus 274 g~~~~~~~~~~~~~~r~~l~ 293 (294)
T cd00615 274 GKELVEELIELALYARQEIN 293 (294)
T ss_pred hHHHHHHHHHHHHHHHHHHh
Confidence 23345556666666666654
No 303
>PRK02769 histidine decarboxylase; Provisional
Probab=99.87 E-value=1.1e-18 Score=162.94 Aligned_cols=287 Identities=15% Similarity=0.117 Sum_probs=197.9
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCC--EEEecCHHHHHHHHHHHh--cCCCCEEEecCCCccchHHHHhhCCCeEEEeeccC
Q 014603 90 LPARRAIADYLNRDLPYKLSPDD--VYLTLGCTQAIEVILTVL--ARPGANILLPRPGFPYYEARATHSHLEVRHFDLLP 165 (422)
Q Consensus 90 ~~lr~~ia~~l~~~~~~~~~~~~--i~~~~g~~~a~~~~~~~l--~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~ 165 (422)
.++++.+.+++.+.+| .++++ -++|+|||+++..++... ..++++|++++..|++....++.+|.+.+.++.++
T Consensus 64 ~~~e~~~~~~~a~l~g--~~~~~~~G~~TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~Sv~ka~~~lg~~~~~V~~~~ 141 (380)
T PRK02769 64 FDFERDVMNFFAELFK--IPFNESWGYITNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSVSKIARLLRIKSRVITSLP 141 (380)
T ss_pred HHHHHHHHHHHHHHhC--CCCCCCCEEEecChHHHHHHHHHHHHHhCCCcEEEeCCCceehHHHHHHHcCCCCceeccCC
Confidence 4555555555544444 33444 488999999987766543 24678999999999999999999999888888754
Q ss_pred CCCcccCHHHHHHhhcCC---ceEEEEeCCCCCcccccCHHHHHHHHHHHHHcC---cEEEEcccccccccC---CCCCC
Q 014603 166 AKGWEVDLDAVEALADEN---TVALVIINPGNPCGNVYTYQHLQKIAETAKKLG---IMVIADEVYDHLAFG---NTPFV 236 (422)
Q Consensus 166 ~~~~~~d~~~l~~~~~~~---~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~---~~li~D~~~~~~~~~---~~~~~ 236 (422)
++.+|++.|++.++++ +.+++++.++|++|.+ +++++|.++|+++| +++++|.+|+.+... .....
T Consensus 142 --~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~i---dpi~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~~~ 216 (380)
T PRK02769 142 --NGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAI---DNIKEIQEILKKIGIDDYYIHADAALSGMILPFVNNPPPF 216 (380)
T ss_pred --CCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCccc---CCHHHHHHHHHHhCCCceEEEEEecccceeecccCccccC
Confidence 4569999999988775 8888999999999999 67888899999998 699999999874321 00011
Q ss_pred CccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhh--------hhccCcchHHHHHHHHHHh
Q 014603 237 PMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL--------NISSDPATFIQGAVPQILE 308 (422)
Q Consensus 237 ~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~a~~~~l~ 308 (422)
++.. +. ..+..|.+|++++| ..+|+++.++ +..+.+.... ...++.+.....++-.+|+
T Consensus 217 d~~~-~v---Dsis~s~HK~~~~P-~g~G~l~~r~--------~~~~~~~~~~~yl~~~d~t~~GSR~g~~~l~lw~aL~ 283 (380)
T PRK02769 217 SFAD-GI---DSIAISGHKFIGSP-MPCGIVLAKK--------KYVERISVDVDYIGSRDQTISGSRNGHTALLLWAAIR 283 (380)
T ss_pred CccC-CC---CEEEECCcccCCCC-CCcEEEEEeh--------hhhhhcccCccccCCCCCCccCCCCcHHHHHHHHHHH
Confidence 2211 22 26778999996522 4489988864 2333331110 1123444455566666666
Q ss_pred hchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCC
Q 014603 309 KTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVG 388 (422)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~ 388 (422)
......+++..++..++.+++.+.|++. ++..+..|... .+.++.+ ..++ . +|..+.+-
T Consensus 284 ~lg~~G~~~~~~~~~~la~~l~~~L~~~-g~~~~~~p~~~-~v~f~~~---------~~~~----~--~~w~l~~~---- 342 (380)
T PRK02769 284 SLGSKGLRQRVQHCLDMAQYAVDRLQAN-GIPAWRNPNSI-TVVFPCP---------SERI----W--KKWHLATS---- 342 (380)
T ss_pred HHCHHHHHHHHHHHHHHHHHHHHHHHhC-CCEEEcCCCce-EEEEcCC---------CHHH----H--hCeeEccc----
Confidence 6566788999999999999999999886 77756566533 3333332 1222 2 35555442
Q ss_pred CCCeEEEEec--cChHHHHHHHHHHHHHHHHh
Q 014603 389 LKDWLRITFA--VEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 389 ~~~~iRis~~--~~~~~l~~~~~~l~~~~~~~ 418 (422)
++++||++. ++.+.++.+++.|...+...
T Consensus 343 -~~~~hi~~~~~~~~~~~~~f~~dl~~~~~~~ 373 (380)
T PRK02769 343 -GNQAHIITMPHHNKQQIDSLIDELIFDLKNP 373 (380)
T ss_pred -CCEEEEEECCCCCHHHHHHHHHHHHHHHhcc
Confidence 357899987 67889999999998887644
No 304
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.87 E-value=2.8e-19 Score=171.86 Aligned_cols=349 Identities=12% Similarity=0.086 Sum_probs=214.1
Q ss_pred cCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHH
Q 014603 42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ 121 (422)
Q Consensus 42 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 121 (422)
.+|+.+|||..|...... -..+|+|.+++.+++.+... ........+.+..+++.|.+.. +...+.++++++|++
T Consensus 53 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~Ai~~ql~~l~~--~~~~~~~~~~~~~lae~L~~~~--p~~~~~v~f~~SGse 127 (460)
T PRK06916 53 VNGNEYYDGVSSIWLNVH-GHQVPELDEAIREQLNKIAH--STLLGLANVPSILLAEKLIEVV--PEGLKKVFYSDSGAT 127 (460)
T ss_pred CCCCEEEEcchhHHHhhc-CCCCHHHHHHHHHHHHhCCC--ccccccCCHHHHHHHHHHHHhC--CCCCCEEEEeCCcHH
Confidence 368899999877543222 24678999999999986211 1110111233444555554432 223368999999999
Q ss_pred HHHHHHHHhcC-------CC-CEEEecCCCccchHHHHhhCCC-------------eEEEeeccCCC--Ccc--------
Q 014603 122 AIEVILTVLAR-------PG-ANILLPRPGFPYYEARATHSHL-------------EVRHFDLLPAK--GWE-------- 170 (422)
Q Consensus 122 a~~~~~~~l~~-------~g-d~Vl~~~~~~~~~~~~~~~~g~-------------~~~~~~~~~~~--~~~-------- 170 (422)
|++.+++.... +| .+|+....+||+....+..... .+..+|..... .+.
T Consensus 128 Ave~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~ 207 (460)
T PRK06916 128 AVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVK 207 (460)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCcccccccCCChHHHHH
Confidence 99999886432 33 6899999999987544433211 11222211000 000
Q ss_pred cCHHHHHHhhc--CCceEEEEeCC--CCCcccc-cCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCC
Q 014603 171 VDLDAVEALAD--ENTVALVIINP--GNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIV 245 (422)
Q Consensus 171 ~d~~~l~~~~~--~~~~~i~i~~p--~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~ 245 (422)
.+++.+++.++ .+..+.+|..| +...|.+ +|++.++++.++|+++|+++|+||++.++.++|... ....++..+
T Consensus 208 ~~~~~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRtG~~~-a~~~~gv~P 286 (460)
T PRK06916 208 KHLEELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTGKMF-ACEHENVTP 286 (460)
T ss_pred HHHHHHHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcCchhh-HHHhcCCCC
Confidence 12455666664 24456667777 5566764 688899999999999999999999999887777532 222333333
Q ss_pred CeEEEecCccccCCCC-ceeEEEEeeCCCCcccchhHHHHHHh--------hhhhccCcchHHHHHHHHHHhhchHHHHH
Q 014603 246 PVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKS--------FLNISSDPATFIQGAVPQILEKTEEEFFS 316 (422)
Q Consensus 246 ~~i~i~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~a~~~~l~~~~~~~~~ 316 (422)
+++ +++|.+ ..| +++|.++++ +++.+.+.. ....+.+.++++++++.+.|+...+.
T Consensus 287 Div---~~gK~l-~gG~~Pi~av~~~--------~ei~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~--- 351 (460)
T PRK06916 287 DIM---TAGKGL-TGGYLPIAITVTT--------DEIYNAFYGDYEEQKTFFHGHSYTGNPLGCAVALANLELYEKT--- 351 (460)
T ss_pred Cee---eeehhh-hcCccccceeeec--------HHHHHHhhccccccCccccCCCCCCCHHHHHHHHHHHHHHHhc---
Confidence 444 357995 567 599999986 467666542 11234467889999999888764322
Q ss_pred HHHHHHHHHHHHHHHHhhcC---CCCCCCCCCCCceEEEEecCcccc-c-CCCC----HHHHHHHHHHhcCeEEecCCCC
Q 014603 317 KITDILRETADICCDRLKEI---PCITCPKKPEGSMFVMVKLNYSLL-E-GINS----DMEFALKLAKEESVIVLPGITV 387 (422)
Q Consensus 317 ~~~~~~~~~~~~l~~~L~~~---~~~~~~~~~~~g~~~~~~~~~~~~-~-~~~~----~~~~~~~l~~~~gi~v~~g~~~ 387 (422)
+..++++++-+++.+.|+++ +.+. . ...-|.++.+.+..... . .... ...+... +.++||++.+.
T Consensus 352 ~l~~~~~~~g~~l~~~l~~l~~~~~v~-~-vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~-~~~~Gvl~~~~--- 425 (460)
T PRK06916 352 NLIEQVARKTEYVATQLEDLFALKHVG-D-IRQLGLMVGIELVKNKETKEPFEWTERVGVQVCKR-SRELGMLTRPL--- 425 (460)
T ss_pred cHHHHHHHHHHHHHHHHHHhhcCCCeE-E-eecCCceeeEEeecccccccCCCchhhHHHHHHHH-HHHCCeEEEec---
Confidence 23445555555555555543 3222 1 22336666666632110 0 0000 1234444 45679999874
Q ss_pred CCCCeEEEEec--cChHHHHHHHHHHHHHHHHhc
Q 014603 388 GLKDWLRITFA--VEPSALEDGLGRMKAFYDRHA 419 (422)
Q Consensus 388 ~~~~~iRis~~--~~~~~l~~~~~~l~~~~~~~~ 419 (422)
.+.+|+.++ +++++|++++++|+++++++.
T Consensus 426 --g~~l~~~Ppl~it~~~id~~~~~l~~~l~~~~ 457 (460)
T PRK06916 426 --GNTIVFMPPLASTIDELDEMLRILYKAISDVT 457 (460)
T ss_pred --CCEEEEeCCcccCHHHHHHHHHHHHHHHHhhc
Confidence 257898876 789999999999999998764
No 305
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.87 E-value=1.1e-18 Score=167.62 Aligned_cols=353 Identities=14% Similarity=0.107 Sum_probs=211.5
Q ss_pred cCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCC-CCCEEEe-cCH
Q 014603 42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLS-PDDVYLT-LGC 119 (422)
Q Consensus 42 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~-~~~i~~~-~g~ 119 (422)
.+|+.+|||..|......+ ..+|.|.+++.+++.+....... ....+.+..+++.+....+.... .+.++++ ++|
T Consensus 60 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~Ai~~ql~~~~~~~~~--~~~~~~~~~la~~L~~~~p~~~~~~~~v~f~~~SG 136 (464)
T PRK06938 60 VEGRQFIDCLAGAGTLALG-HNHPVVIEAIQQVLADELPLHTL--DLTTPVKDQFVQDLFASLPEAFAREAKIQFCGPTG 136 (464)
T ss_pred CCCCEEEEccCCccccccC-CCCHHHHHHHHHHHHhhhccccc--ccCCHHHHHHHHHHHHhCcccccccceEEEeCCCc
Confidence 3688999998887553333 45789999999998642211111 11123444455555432221111 1356665 799
Q ss_pred HHHHHHHHHHhc--CCCCEEEecCCCccchHHHHhhC-CC------------eEEEeeccCCCC--cc--------cCHH
Q 014603 120 TQAIEVILTVLA--RPGANILLPRPGFPYYEARATHS-HL------------EVRHFDLLPAKG--WE--------VDLD 174 (422)
Q Consensus 120 ~~a~~~~~~~l~--~~gd~Vl~~~~~~~~~~~~~~~~-g~------------~~~~~~~~~~~~--~~--------~d~~ 174 (422)
++|++.+++... ....+|+....+||++...+... +. ++..++...... ++ .+.+
T Consensus 137 SEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 216 (464)
T PRK06938 137 TDAVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLH 216 (464)
T ss_pred HHHHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccccccCchhhHHHHHHH
Confidence 999999988643 12368999999999875444331 10 122222211100 00 1255
Q ss_pred HHHHhhcC-----CceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCe
Q 014603 175 AVEALADE-----NTVALVIINP-GNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPV 247 (422)
Q Consensus 175 ~l~~~~~~-----~~~~i~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (422)
.+++.+.+ +..+.+|..| +...|.+ +|.+.++++.++|++||+++|.||++.++.++|... ....++..+++
T Consensus 217 ~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~-a~e~~gv~PDi 295 (464)
T PRK06938 217 YLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTGKMF-AFEHAGIIPDV 295 (464)
T ss_pred HHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcHHH-HHHhcCCCCCE
Confidence 67776653 2456677778 4445664 568899999999999999999999999987777532 22334444444
Q ss_pred EEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhh-hhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHH
Q 014603 248 LTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSF-LNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETA 326 (422)
Q Consensus 248 i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 326 (422)
+++ +|.+ ..|+++|.+++++ ++ +.+... ...+.+.++++++++.+.|+...++.+ .++.+++-
T Consensus 296 v~~---gKgl-ggG~PlsAv~~~~--------~~-~~~~~~~~~~T~~gnpla~Aaa~a~L~~l~~~~l---~~~~~~~G 359 (464)
T PRK06938 296 VVL---SKAI-GGSLPLAVVVYRE--------WL-DTWQPGAHAGTFRGNQMAMAAGSATLRYIKEHRL---AEHAAAMG 359 (464)
T ss_pred EEe---eccc-cCCCceEEEeehh--------Hh-hccCCCCCCCCCCcCHHHHHHHHHHHHHHHHhHH---HHHHHHHH
Confidence 444 6996 4689999999852 32 333222 233557889999999999886543322 23333333
Q ss_pred HHHHHHhh----cCCCCCCCCCCCCceEEEEecCccc-ccC----CC-C---HHHHHHHHHHhcCeEEecCCCCCCCCeE
Q 014603 327 DICCDRLK----EIPCITCPKKPEGSMFVMVKLNYSL-LEG----IN-S---DMEFALKLAKEESVIVLPGITVGLKDWL 393 (422)
Q Consensus 327 ~~l~~~L~----~~~~~~~~~~~~~g~~~~~~~~~~~-~~~----~~-~---~~~~~~~l~~~~gi~v~~g~~~~~~~~i 393 (422)
+++.+.|+ ++|.+. . ...-|.++.+.+.... ... .. + ...+... +.++|+++.++..+ .+.+
T Consensus 360 ~~l~~~L~~l~~~~~~i~-~-VrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Gll~~~~g~~--~~~l 434 (464)
T PRK06938 360 ERLREHLRQLQRDYPQLG-D-VRGRGLMLGVEIVDPQGEPDALGHPPANGELASLIQRE-CLRRGLILELGGRH--GSVV 434 (464)
T ss_pred HHHHHHHHHHHHhCCCee-e-eeccceEEEEEeccCcccccccccCCccHHHHHHHHHH-HHHCCeEEeecCCC--CCEE
Confidence 33333333 344332 1 2344677777773210 000 00 0 1233343 45679999875322 4789
Q ss_pred EEEec--cChHHHHHHHHHHHHHHHHhc
Q 014603 394 RITFA--VEPSALEDGLGRMKAFYDRHA 419 (422)
Q Consensus 394 Ris~~--~~~~~l~~~~~~l~~~~~~~~ 419 (422)
|+.++ .++++++++++++++++.+.-
T Consensus 435 ~~~Ppl~it~~eid~~~~~l~~~l~~~~ 462 (464)
T PRK06938 435 RFLPPLIITAEQIDEVAEIFAEAVAAAV 462 (464)
T ss_pred EEECCCccCHHHHHHHHHHHHHHHHHHh
Confidence 99876 789999999999999998754
No 306
>PRK12403 putative aminotransferase; Provisional
Probab=99.87 E-value=5.2e-19 Score=169.98 Aligned_cols=351 Identities=15% Similarity=0.155 Sum_probs=208.2
Q ss_pred cCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCC-CC-C-CCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecC
Q 014603 42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFN-CY-S-STVGILPARRAIADYLNRDLPYKLSPDDVYLTLG 118 (422)
Q Consensus 42 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~-~y-~-~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g 118 (422)
.+|+.+|||..|......++ .+|.|.+++.+++.+.... .+ . ......++.+++++++ +...+.++++++
T Consensus 51 ~dG~~ylD~~~g~~~~~lGh-~hp~v~~A~~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~------p~~~~~v~f~~S 123 (460)
T PRK12403 51 NDGKRYLDGMSGLWCTNLGY-GRKDLAAAAARQMEQLPYYNMFFHTTHPAVIELSELLFSLL------PGHYSHAIYTNS 123 (460)
T ss_pred CCCCEEEECchhHHhhcCCC-CCHHHHHHHHHHHHhCCCeecccccCCHHHHHHHHHHHHhC------CCCcCEEEEeCC
Confidence 36889999988864433343 6799999999999763211 11 1 1112234455555444 223468999999
Q ss_pred HHHHHHHHHHHhc-------CCCC-EEEecCCCccchHHHHhh-CCCe-----------EEEeeccCC--CCccc-----
Q 014603 119 CTQAIEVILTVLA-------RPGA-NILLPRPGFPYYEARATH-SHLE-----------VRHFDLLPA--KGWEV----- 171 (422)
Q Consensus 119 ~~~a~~~~~~~l~-------~~gd-~Vl~~~~~~~~~~~~~~~-~g~~-----------~~~~~~~~~--~~~~~----- 171 (422)
|++|++.+++... ++++ .|+....+||+....+.. .+.. +..+|.... .++..
T Consensus 124 GseA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 203 (460)
T PRK12403 124 GSEANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEF 203 (460)
T ss_pred cHHHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCcccccccCCChHHH
Confidence 9999999998763 2333 456667788876443322 2211 112211000 00011
Q ss_pred ---CHHHHHHhhc---CCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCC
Q 014603 172 ---DLDAVEALAD---ENTVALVIINP-GNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS 243 (422)
Q Consensus 172 ---d~~~l~~~~~---~~~~~i~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~ 243 (422)
+.+.+++.+. ++..+.++..| +...|.+ .|.+.++++.++|++||+++|+||+++++..+|.... ...++.
T Consensus 204 ~~~~~~~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a-~e~~gv 282 (460)
T PRK12403 204 GRRAALQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTGEWFA-HEHFGF 282 (460)
T ss_pred HHHHHHHHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhh-hhhcCC
Confidence 1244555442 24455667777 4555654 6778899999999999999999999998877775432 233333
Q ss_pred CCCeEEEecCccccCCCC-ceeEEEEeeCCCCcccchhHHHHHHhh-----hhhccCcchHHHHHHHHHHhhchHH-HHH
Q 014603 244 IVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKSF-----LNISSDPATFIQGAVPQILEKTEEE-FFS 316 (422)
Q Consensus 244 ~~~~i~i~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~a~~~~l~~~~~~-~~~ 316 (422)
.+++++ ++|.+ ..| +++|.++++ +++.+.+... ...+.+.++++++++.+.|+...++ .++
T Consensus 283 ~PDiv~---~gK~l-ggG~~Piga~v~~--------~~i~~~~~~~~~~~~~~~T~~gnPl~~Aaala~L~~i~~~~l~~ 350 (460)
T PRK12403 283 EPDTLS---IAKGL-TSGYVPMGGLVLS--------KRIAEALVEQGGVFAHGLTYSGHPVAAAVAIANLKALRDEGVVT 350 (460)
T ss_pred CCCeEE---Ecccc-cccccceEEEEEC--------HHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhccHHH
Confidence 334443 68995 557 489998875 4676666421 1234467889999999999865432 233
Q ss_pred HHH-HHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccc--cCCCCHHHH---HHHHHHhcCeEEecCCCCCCC
Q 014603 317 KIT-DILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLL--EGINSDMEF---ALKLAKEESVIVLPGITVGLK 390 (422)
Q Consensus 317 ~~~-~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~---~~~l~~~~gi~v~~g~~~~~~ 390 (422)
+.. +.-...++.+.+..++.|.+. . ...-|.++.+.+..... ......... +...+.++|+.+.+. .
T Consensus 351 ~~~~~~g~~l~~~L~~l~~~~~~i~-~-vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~-----~ 423 (460)
T PRK12403 351 RVKDDTGPYLQRCLREVFGDHPLVG-E-VQGAGLVAALQFAEDKATRKRFANENDLAWRCRTIGFEEGVIIRST-----L 423 (460)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCEE-e-EeecceEEEEEEccCccccccccchhHHHHHHHHHHHhCCEEEEec-----C
Confidence 332 223333344443334444322 1 23446677776642110 000000111 222345679999753 2
Q ss_pred CeEEEEec--cChHHHHHHHHHHHHHHHHhc
Q 014603 391 DWLRITFA--VEPSALEDGLGRMKAFYDRHA 419 (422)
Q Consensus 391 ~~iRis~~--~~~~~l~~~~~~l~~~~~~~~ 419 (422)
+.+|+++. .++++++++++++++++++..
T Consensus 424 ~~~~l~Ppl~it~~eid~~~~~l~~al~~~~ 454 (460)
T PRK12403 424 GRMIMAPALVAGRAEIDELVDKTRIAVDRTA 454 (460)
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 45899988 599999999999999998874
No 307
>PRK06149 hypothetical protein; Provisional
Probab=99.87 E-value=5e-19 Score=184.43 Aligned_cols=344 Identities=16% Similarity=0.136 Sum_probs=210.3
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCC-CCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNC-YSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ 121 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~-y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 121 (422)
+|+.++||..|... . -..+|+|.+++.+++....... | ......++.+++++++ +...+.++|+++|++
T Consensus 583 dG~~ylD~~~~~~~--l-Gh~hp~v~~Ai~~q~~~l~~~~~~-~~~~~~elae~L~~~~------p~~~~~v~f~~SGsE 652 (972)
T PRK06149 583 AGRSYLDMVNNVTV--L-GHGHPRLAAAAARQWSLLNTNSRF-HYAAVAEFSERLAALA------PDGLDTVFLVNSGSE 652 (972)
T ss_pred CCCEEEECCCCccc--c-CCCCHHHHHHHHHHHHhccccccc-cCHHHHHHHHHHHHhC------CCCcCEEEEeCCchH
Confidence 58889999987532 1 2368999999999987632221 2 1112334444444443 223468999999999
Q ss_pred HHHHHHHH---hcCCCCEEEecCCCccchHHHHhhC-C-----C--------eEEEeeccCC--CCcc-cC-----HHHH
Q 014603 122 AIEVILTV---LARPGANILLPRPGFPYYEARATHS-H-----L--------EVRHFDLLPA--KGWE-VD-----LDAV 176 (422)
Q Consensus 122 a~~~~~~~---l~~~gd~Vl~~~~~~~~~~~~~~~~-g-----~--------~~~~~~~~~~--~~~~-~d-----~~~l 176 (422)
|++.+++. ..+ ..+|+....+||++...+... + . .+..++.... ..+. .+ .+.+
T Consensus 653 A~e~AlklAr~~tg-r~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~ 731 (972)
T PRK06149 653 ANDLAIRLAWAASG-RRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDV 731 (972)
T ss_pred HHHHHHHHHHHhcC-CCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHH
Confidence 99999884 333 367888888898765433211 0 0 0111211100 0011 11 1233
Q ss_pred HHhh-----cCCceEEEEeCC-CCCcc-cccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEE
Q 014603 177 EALA-----DENTVALVIINP-GNPCG-NVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLT 249 (422)
Q Consensus 177 ~~~~-----~~~~~~i~i~~p-~nptG-~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~ 249 (422)
++.+ ..+..+.+|+.| ....| ..+|++.++++.++|++||+++|+||++.+++..|.....+..++..++++
T Consensus 732 ~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv~PDiv- 810 (972)
T PRK06149 732 VAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGVVPDII- 810 (972)
T ss_pred HHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCccchhhhhcCCCCCEE-
Confidence 3322 124566677777 33345 567888999999999999999999999988877775433344444434444
Q ss_pred EecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHh--hhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHH
Q 014603 250 LGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKS--FLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETAD 327 (422)
Q Consensus 250 i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~ 327 (422)
+++|.+ ..|.++|+++++ +++++.+.. ....+.+.++++++++.+.|+...++ +..+..++.-+
T Consensus 811 --t~gK~l-g~G~Pl~av~~~--------~~i~~~~~~~~~~~sT~~gnP~~~aaala~L~~i~~e---~l~~~~~~~G~ 876 (972)
T PRK06149 811 --TMAKGM-GNGHPLGAVITR--------REIAEALEAEGYFFSSTGGSPVSCRIGMAVLDVLREE---KLQENARRVGD 876 (972)
T ss_pred --Eecccc-cCCeeeEEEEEc--------HHHHhhhccCCcccCCCCCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHH
Confidence 568995 568999999986 467776653 12223467899999999999864433 23334444444
Q ss_pred HHHHHhhc----CCCCCCCCCCCCceEEEEecCccc--ccC-CCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--
Q 014603 328 ICCDRLKE----IPCITCPKKPEGSMFVMVKLNYSL--LEG-INSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA-- 398 (422)
Q Consensus 328 ~l~~~L~~----~~~~~~~~~~~~g~~~~~~~~~~~--~~~-~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~-- 398 (422)
++++.|++ .|.+. . ...-|.++.+.+.... ... ......+...+ .++||++.+.... .+.+|+.+.
T Consensus 877 ~l~~~L~~l~~~~~~i~-~-vrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~l-~~~Gvl~~~~g~~--~~vl~~~Ppl~ 951 (972)
T PRK06149 877 HLKARLEALADRHPLIG-A-VHGMGLYLGVELVRDRQTLEPATEETAAICDRL-LELGVIMQPTGDH--LNILKIKPPLC 951 (972)
T ss_pred HHHHHHHHHHHhCCCeE-E-EeecceEEEEEEecCcccCCCChHHHHHHHHHH-HhCCeEEeecCCC--CCEEEEECCCc
Confidence 44444443 43232 1 2334677777763210 000 00123344444 5679999875321 478999887
Q ss_pred cChHHHHHHHHHHHHHHHH
Q 014603 399 VEPSALEDGLGRMKAFYDR 417 (422)
Q Consensus 399 ~~~~~l~~~~~~l~~~~~~ 417 (422)
++++++++++++|++++.+
T Consensus 952 it~~~id~~~~~l~~~l~~ 970 (972)
T PRK06149 952 LDRESADFFVDMLDRVLTE 970 (972)
T ss_pred CCHHHHHHHHHHHHHHHHh
Confidence 7999999999999999865
No 308
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.86 E-value=2.6e-19 Score=168.11 Aligned_cols=306 Identities=21% Similarity=0.283 Sum_probs=202.9
Q ss_pred HHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHh-cCCCCEEEecCCC
Q 014603 65 SVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVL-ARPGANILLPRPG 143 (422)
Q Consensus 65 ~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l-~~~gd~Vl~~~~~ 143 (422)
++..+++.+.++++....++ ....++++.+++++ ..++++.++++|.|+.+++.++ +++||+|+++..+
T Consensus 5 ~e~~~~v~~~l~s~~~~~~g--~~~~~fE~~~a~~~--------g~~~~~~~~sgt~Al~~al~~l~~~~gdeVi~p~~t 74 (363)
T PF01041_consen 5 EEEIDAVLEVLRSGWLSTYG--PYVEEFEKEFAEYF--------GVKYAVAVSSGTSALHLALRALGLGPGDEVIVPAYT 74 (363)
T ss_dssp HHHHHHHHHHHHHTCCSSSS--HHHHHHHHHHHHHH--------TSSEEEEESSHHHHHHHHHHHTTGGTTSEEEEESSS
T ss_pred HHHHHHHHHHHHhCCccCCC--HHHHHHHHHHHHHh--------CCCeEEEeCChhHHHHHHHHhcCCCcCceEecCCCc
Confidence 45667778887776443333 34789999999999 4578999999999999999998 5799999999999
Q ss_pred ccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcc
Q 014603 144 FPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADE 223 (422)
Q Consensus 144 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~ 223 (422)
|..........|.+++.+++++ +.+.+|++.+++.++++++++++++. .|.. .++.+|.++|+++|++||+|.
T Consensus 75 ~~~~~~ai~~~G~~pv~~Di~~-~~~~id~~~~~~~i~~~t~ai~~~h~---~G~~---~d~~~i~~~~~~~~i~lIeD~ 147 (363)
T PF01041_consen 75 FPATASAILWAGAEPVFVDIDP-ETLNIDPEALEKAITPKTKAILVVHL---FGNP---ADMDAIRAIARKHGIPLIEDA 147 (363)
T ss_dssp -THHHHHHHHTT-EEEEE-BET-TTSSB-HHHHHHHHHTTEEEEEEE-G---GGB------HHHHHHHHHHTT-EEEEE-
T ss_pred chHHHHHHHHhccEEEEEeccC-CcCCcCHHHHHHHhccCccEEEEecC---CCCc---ccHHHHHHHHHHcCCcEEEcc
Confidence 9999999999999999999986 46789999999999999999997764 4544 479999999999999999999
Q ss_pred ccccccc-CCCCCCCccccCCCCCeEEEecC--ccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhhhc--------
Q 014603 224 VYDHLAF-GNTPFVPMGVFGSIVPVLTLGSI--SKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNIS-------- 292 (422)
Q Consensus 224 ~~~~~~~-~~~~~~~~~~~~~~~~~i~i~s~--sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 292 (422)
+++.... .|. .+..++ .+.++|| +|.+... ..|++++++ +++.++++......
T Consensus 148 a~a~g~~~~g~---~~G~~g----d~~~fSf~~~K~i~~g--eGG~v~~~~-------~~~~~~~~~~~~~g~~~~~~~~ 211 (363)
T PF01041_consen 148 AQAFGARYKGR---PVGSFG----DIAIFSFHPTKIITTG--EGGAVVTND-------PELAERARALRNHGRSRDAFRR 211 (363)
T ss_dssp TTTTT-EETTE---ETTSSS----SEEEEESSTTSSS-SS--S-EEEEEST-------HHHHHHHHHHTBTTEETSECST
T ss_pred ccccCceeCCE---eccCCC----CceEecCCCCCCCcCC--CCeeEEecH-------HHHHHHhhhhhccCcCcccccc
Confidence 9987432 232 223333 2777787 4775322 248888875 56777776654311
Q ss_pred ----------cCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCc-----eEEEEecCc
Q 014603 293 ----------SDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGS-----MFVMVKLNY 357 (422)
Q Consensus 293 ----------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g-----~~~~~~~~~ 357 (422)
...+.+..+.+..-|+. +++..++-+++.+.+.+.|++++++.....+... ..+.+.++.
T Consensus 212 ~~~~~~~g~n~rm~~~~AAigl~QL~~-----L~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~~~ 286 (363)
T PF01041_consen 212 YRHELPPGYNFRMSELQAAIGLAQLKR-----LDEIIARRRENAQRYREALAGIPGIKPPPIPDGAERSSYYRFPIRLPD 286 (363)
T ss_dssp TEESSSS--B-B-BHHHHHHHHHHHHT-----HHHHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTEEBCESSEEEEETC
T ss_pred ccccccCCcccccHHHHHHHHHHHHHH-----hhhhHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccccccc
Confidence 12233333343444443 6777777788888999999998876322222221 122334443
Q ss_pred ccccCCCCHHHHHHHHHHhcCeEEecCCC-C-C------C----------------CCeEEEEec--cChHHHHHHHHHH
Q 014603 358 SLLEGINSDMEFALKLAKEESVIVLPGIT-V-G------L----------------KDWLRITFA--VEPSALEDGLGRM 411 (422)
Q Consensus 358 ~~~~~~~~~~~~~~~l~~~~gi~v~~g~~-~-~------~----------------~~~iRis~~--~~~~~l~~~~~~l 411 (422)
... .+..++...| ++.||.+.+... + . . +..+-+-+. .++++++..++.|
T Consensus 287 ~~~---~~rd~l~~~L-~~~GI~~~~~~~~pl~~~~~~~~~~~~~~~~~P~ae~l~~r~l~LP~~~~lt~edv~~I~~~i 362 (363)
T PF01041_consen 287 EAL---ADRDELVEAL-RARGIETRPHYPKPLHRQPVYRSYPYYAPGDLPNAERLSQRLLSLPIHPRLTEEDVDYIAEAI 362 (363)
T ss_dssp CGC---STHHHHHHHH-HHTTBEEBCSTSSCGGGSGGGTTGEEEETSSSHHHHHHHHHEEEEEHSTTSCHHHHHHHHHHH
T ss_pred ccc---chHHHHHHHH-HHCCCcccccccCchhhhHHHHhcCccccCCCHHHHHHHhCeEECcCCCCCCHHHHHHHhhcc
Confidence 111 1345565555 667999987652 1 0 0 123444443 5788999888877
Q ss_pred H
Q 014603 412 K 412 (422)
Q Consensus 412 ~ 412 (422)
+
T Consensus 363 r 363 (363)
T PF01041_consen 363 R 363 (363)
T ss_dssp H
T ss_pred C
Confidence 4
No 309
>PRK07480 putative aminotransferase; Validated
Probab=99.86 E-value=3e-19 Score=171.28 Aligned_cols=353 Identities=14% Similarity=0.123 Sum_probs=209.9
Q ss_pred cCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHH
Q 014603 42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ 121 (422)
Q Consensus 42 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 121 (422)
.+|+.+|||..|......+ ..+|.+.+++.+++....... .......+.+..+++.|.... +...+.++|+++|++
T Consensus 47 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~Ai~~q~~~~~~~~-~~~~~~~~~~~~lae~L~~~~--p~~~~~v~f~~SGse 122 (456)
T PRK07480 47 SEGNKILDGMAGLWCVNVG-YGRKELADAAARQMRELPYYN-TFFKTTHPPAIELAAKLAEVA--PPGFNHVFFTNSGSE 122 (456)
T ss_pred CCCCEEEEccchHHHhcCC-CCCHHHHHHHHHHHHhcCCcc-cccccCCHHHHHHHHHHHHhC--CCCcCEEEEeCCcHH
Confidence 4689999998876443222 457899999999997632110 000112244444555554432 223468999999999
Q ss_pred HHHHHHHHhcC-------CC-CEEEecCCCccchHHHHhhCC-Ce------------EEEeeccCC--CCcccC------
Q 014603 122 AIEVILTVLAR-------PG-ANILLPRPGFPYYEARATHSH-LE------------VRHFDLLPA--KGWEVD------ 172 (422)
Q Consensus 122 a~~~~~~~l~~-------~g-d~Vl~~~~~~~~~~~~~~~~g-~~------------~~~~~~~~~--~~~~~d------ 172 (422)
|++.+++.... +| .+|+....+||+....+...+ .. +..++.... .....+
T Consensus 123 A~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 202 (456)
T PRK07480 123 ANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGL 202 (456)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCcccccccCCChHHHHH
Confidence 99999876421 22 578999999988654332221 11 111110000 000011
Q ss_pred --HHHHHHhhc---CCceEEEEeCC-CCCccc-ccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCC
Q 014603 173 --LDAVEALAD---ENTVALVIINP-GNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIV 245 (422)
Q Consensus 173 --~~~l~~~~~---~~~~~i~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~ 245 (422)
.+.+++.+. .+..+.+|..| +...|. .+|.+.++++.++|++||+++|+||++.++..+|... ....++..+
T Consensus 203 ~~~~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~-a~~~~gv~P 281 (456)
T PRK07480 203 AAARQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTGEWF-GSQHFGIKP 281 (456)
T ss_pred HHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchh-hhhhcCCCC
Confidence 245554432 24456667777 455666 4677789999999999999999999999887777532 223334333
Q ss_pred CeEEEecCccccCCCC-ceeEEEEeeCCCCcccchhHHHHHHh-----hhhhccCcchHHHHHHHHHHhhchHHH-HHHH
Q 014603 246 PVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKS-----FLNISSDPATFIQGAVPQILEKTEEEF-FSKI 318 (422)
Q Consensus 246 ~~i~i~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~a~~~~l~~~~~~~-~~~~ 318 (422)
+++ +++|.+ ..| +++|.++++ +++++.+.. ....+.+.++++++++.+.|+...++. +++.
T Consensus 282 Div---~~gK~l-~gG~~Pi~av~~~--------~~i~~~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~~~l~~~~ 349 (456)
T PRK07480 282 DLM---TIAKGL-TSGYIPMGAVGVG--------DRVAEVLIEEGGEFNHGFTYSGHPVAAAVALANLRILRDEGIVERV 349 (456)
T ss_pred Cee---eeehhh-ccCCccceEEEEc--------HHHHHHHhcCCCCcccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHH
Confidence 433 457995 457 489999986 467776631 123455788999999999998654322 2222
Q ss_pred H-HHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccc--cCCCC---HHHHHHHHHHhcCeEEecCCCCCCCCe
Q 014603 319 T-DILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLL--EGINS---DMEFALKLAKEESVIVLPGITVGLKDW 392 (422)
Q Consensus 319 ~-~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~---~~~~~~~l~~~~gi~v~~g~~~~~~~~ 392 (422)
. +.-...++.+.+ ++++|.+. . ...-|.++.+.+..... ....+ ....+...+.++||++.+. .+.
T Consensus 350 ~~~~g~~l~~~l~~-l~~~~~i~-~-vrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~-----~~~ 421 (456)
T PRK07480 350 RDDTGPYLQKRLRE-LADHPLVG-E-VRGVGLVGAIELVKDKATRERFEAGGGVGTICRDHCFANGLIMRAV-----GDR 421 (456)
T ss_pred HHHHHHHHHHHHHH-hhcCCCee-e-EEeecceEEEEEeccccccccCcchhhHHHHHHHHHHHCCcEEeec-----CCE
Confidence 1 222233333333 34443222 1 22346677777732110 00001 1123333456679999763 267
Q ss_pred EEEEec--cChHHHHHHHHHHHHHHHHhc
Q 014603 393 LRITFA--VEPSALEDGLGRMKAFYDRHA 419 (422)
Q Consensus 393 iRis~~--~~~~~l~~~~~~l~~~~~~~~ 419 (422)
+|+++. .++++|++++++|.+++.+..
T Consensus 422 l~~~Ppl~it~~eid~~~~~l~~al~~~~ 450 (456)
T PRK07480 422 MIISPPLVITHAEIDELVEKARKALDATA 450 (456)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 999988 589999999999999998763
No 310
>PRK06148 hypothetical protein; Provisional
Probab=99.86 E-value=5.2e-19 Score=184.30 Aligned_cols=346 Identities=14% Similarity=0.075 Sum_probs=213.2
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCC-CCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFN-CYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ 121 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~-~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 121 (422)
+|+.++||..|... . -..+|+|.+++.+++.....+ .|. .+.+..+++.|.+..+ ...+.++|++||++
T Consensus 622 dG~~ylD~~~g~~~--l-GH~hp~v~~Ai~~q~~~l~~~~~~~-----~~~~~~lAe~L~~~~p--~~~~~v~f~nSGsE 691 (1013)
T PRK06148 622 RGRAYLDCFNNVCH--V-GHAHPRVVAAAARQAARLNTNTRYL-----HDAIVAYAERLTATLP--DGLTVAFFVNSGSE 691 (1013)
T ss_pred CCCEEEEcccChhh--c-CCCCHHHHHHHHHHHhhcCCcCCcC-----CHHHHHHHHHHHHhCC--CCcCEEEEeCCcHH
Confidence 48889999888522 2 346899999999998763121 221 2334445555544322 23368999999999
Q ss_pred HHHHHHHHhc--CCCCEEEecCCCccchHHHHhhCCC-------------eEEEeeccC--CCCccc-C-------HHHH
Q 014603 122 AIEVILTVLA--RPGANILLPRPGFPYYEARATHSHL-------------EVRHFDLLP--AKGWEV-D-------LDAV 176 (422)
Q Consensus 122 a~~~~~~~l~--~~gd~Vl~~~~~~~~~~~~~~~~g~-------------~~~~~~~~~--~~~~~~-d-------~~~l 176 (422)
|++.+++... ....+|++...+||+....+..... .+..++... ...+.. + .+.+
T Consensus 692 A~e~AlklAr~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l 771 (1013)
T PRK06148 692 ANSLALRLARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESV 771 (1013)
T ss_pred HHHHHHHHHHHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHH
Confidence 9999988653 2236899999999887543222110 111111100 001111 1 1234
Q ss_pred HHhhc-----CCceEEEEeCC-CCCccc-ccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEE
Q 014603 177 EALAD-----ENTVALVIINP-GNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLT 249 (422)
Q Consensus 177 ~~~~~-----~~~~~i~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~ 249 (422)
++.+. .+..+.+|+.| ....|. .+|++.++++.++|+++|+++|.||++.++.++|........++..++++
T Consensus 772 ~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv~PDiv- 850 (1013)
T PRK06148 772 AEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGVVPDIV- 850 (1013)
T ss_pred HHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCCcchhhhhcCCCccee-
Confidence 44332 24466677777 444454 56888899999999999999999999999887775333334444444443
Q ss_pred EecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhh--hhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHH
Q 014603 250 LGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSF--LNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETAD 327 (422)
Q Consensus 250 i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~ 327 (422)
+++|.+ ..|+++|.++++ +++++.+... ...+.+.++++++++.+.|+...++. ..++++++-+
T Consensus 851 --t~gK~l-ggG~Plgav~~~--------~ei~~~~~~g~~~~~Tf~gnpla~aaa~a~L~~i~~e~---l~~~~~~~G~ 916 (1013)
T PRK06148 851 --TMGKPI-GNGHPMGAVVTT--------REIADSFDNGMEYFNTFGGNPVSCAIGLAVLDIIEDED---LQRNALEIGN 916 (1013)
T ss_pred --eecccc-cCCcceEEEEEc--------HHHHhhccCCCccccCCCCCHHHHHHHHHHHHHHhhcc---HHHHHHHHHH
Confidence 347995 568999999986 4677776542 22455788999999999988654322 3333444444
Q ss_pred HHHHHhhc----CCCCCCCCCCCCceEEEEecCcccc-cCC--CCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--
Q 014603 328 ICCDRLKE----IPCITCPKKPEGSMFVMVKLNYSLL-EGI--NSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA-- 398 (422)
Q Consensus 328 ~l~~~L~~----~~~~~~~~~~~~g~~~~~~~~~~~~-~~~--~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~-- 398 (422)
+|++.|++ .|.+. . ...-|.++.+.+..... ... .....+... +.++||++.+.... .+.+|+.++
T Consensus 917 ~l~~~L~~l~~~~~~i~-~-VrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~-~~~~Gvl~~~~g~~--~~vlr~~Ppl~ 991 (1013)
T PRK06148 917 YLLAGLRELQDRFDIIG-D-VRGMGLFLGIELVTDRKTKAPATAIARYVKNG-ARERGILIGTEGPH--DNVLKIRPPLI 991 (1013)
T ss_pred HHHHHHHHHHHhCCCce-E-EeeeceEEEEEecCCccccCccHHHHHHHHHH-HHhCCeEEeccCCC--CCEEEEeCCcc
Confidence 44444443 43222 1 23346677776642110 000 012234444 45679999774322 478999887
Q ss_pred cChHHHHHHHHHHHHHHHHh
Q 014603 399 VEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 399 ~~~~~l~~~~~~l~~~~~~~ 418 (422)
++++++++++++|++++.+.
T Consensus 992 it~~~id~~l~~l~~~l~~~ 1011 (1013)
T PRK06148 992 FSRADADHLLEVLDDVLAAA 1011 (1013)
T ss_pred CCHHHHHHHHHHHHHHHHHH
Confidence 78999999999999999875
No 311
>PRK07036 hypothetical protein; Provisional
Probab=99.86 E-value=5.9e-19 Score=169.70 Aligned_cols=348 Identities=16% Similarity=0.165 Sum_probs=212.6
Q ss_pred cCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCC-CCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHH
Q 014603 42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARF-NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT 120 (422)
Q Consensus 42 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~-~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~ 120 (422)
.+|+.+|||..|......+ ..+|++.+++.+++..... ..+. ....+.+..+++.|.... +...+.++|++||+
T Consensus 48 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~Ai~~q~~~~~~~~~~~--~~~~~~~~~lae~L~~~~--p~~~~~v~f~~sGs 122 (466)
T PRK07036 48 ADGRRYLDGIGGMWCVNVG-YGREEMADAIADQARRLPYYTPFG--DMTNAPAAELAAKLAELA--PGDLNHVFLTTGGS 122 (466)
T ss_pred CCCCEEEECcccHHhhcCC-CCCHHHHHHHHHHHHhCccccccc--ccCCHHHHHHHHHHHHhC--CCCcCEEEEeCCch
Confidence 3689999998886553333 4578999999999875311 1111 012244455555555432 22346899999999
Q ss_pred HHHHHHHHHhc------C-C-CCEEEecCCCccchHHHHhhCCC-------------eEEEeeccCC--CCcccC-----
Q 014603 121 QAIEVILTVLA------R-P-GANILLPRPGFPYYEARATHSHL-------------EVRHFDLLPA--KGWEVD----- 172 (422)
Q Consensus 121 ~a~~~~~~~l~------~-~-gd~Vl~~~~~~~~~~~~~~~~g~-------------~~~~~~~~~~--~~~~~d----- 172 (422)
+|++.+++... . + ..+|+....+||+....+..... .+..++.... ...+..
T Consensus 123 eAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 202 (466)
T PRK07036 123 TAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFC 202 (466)
T ss_pred HHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCcccccccCCChHHHH
Confidence 99999988642 1 2 26899999999987544332211 1122221100 001111
Q ss_pred ---HHHHHHhhc---CCceEEEEeCC-CCCccc-ccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCcc-ccCC
Q 014603 173 ---LDAVEALAD---ENTVALVIINP-GNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMG-VFGS 243 (422)
Q Consensus 173 ---~~~l~~~~~---~~~~~i~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~-~~~~ 243 (422)
.+.+++.+. .+..+.+|..| +...|. .+|++.++++.++|++||+++|+||++.++.++|... ... .++.
T Consensus 203 ~~~~~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~-~~~~~~gv 281 (466)
T PRK07036 203 DFLVDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLGHFF-ASEAVFGI 281 (466)
T ss_pred HHHHHHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCchhh-hhhhhcCC
Confidence 233444442 24566667777 555666 4678889999999999999999999999887776432 222 2333
Q ss_pred CCCeEEEecCccccCCCC-ceeEEEEeeCCCCcccchhHHHHHHhh--------hhhccCcchHHHHHHHHHHhhchHHH
Q 014603 244 IVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKSF--------LNISSDPATFIQGAVPQILEKTEEEF 314 (422)
Q Consensus 244 ~~~~i~i~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~a~~~~l~~~~~~~ 314 (422)
.++++ +++|.+ ..| +++|.++++ +++++.+... ...+.+.++++++++.+.|+...+.
T Consensus 282 ~PDiv---t~gK~l-~gG~~Pi~av~~~--------~~i~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~Le~i~~~- 348 (466)
T PRK07036 282 QPDII---TFAKGL-TSGYQPLGAVIIS--------ERLLDVISGPNAKGNVFTHGFTYSGHPVACAAALKNIEIMERE- 348 (466)
T ss_pred CCCEE---EEcccc-ccCccccEEEEEc--------HHHHHHHhcccCcCcccccCCCCCCCHHHHHHHHHHHHHHHhC-
Confidence 33333 457995 567 589999986 4677766531 1224577899999999998864322
Q ss_pred HHHHHHHHHHHHHHHHHHhhc---CCCCCCCCCCCCceEEEEecCccc-ccCC-CC----HHHHHHHHHHhcCeEEecCC
Q 014603 315 FSKITDILRETADICCDRLKE---IPCITCPKKPEGSMFVMVKLNYSL-LEGI-NS----DMEFALKLAKEESVIVLPGI 385 (422)
Q Consensus 315 ~~~~~~~~~~~~~~l~~~L~~---~~~~~~~~~~~~g~~~~~~~~~~~-~~~~-~~----~~~~~~~l~~~~gi~v~~g~ 385 (422)
+..++++++-+++++.|++ .|.+. . ...-|.++.+.+.... .... .. ...+.. .+.++||++.+..
T Consensus 349 --~l~~~~~~~g~~l~~~L~~l~~~~~v~-~-vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Gvl~~~~~ 423 (466)
T PRK07036 349 --GLCEHVREVGPYFEERLASLRELPLVG-D-VRGDHLMACVECVADKGSKALLPEDIAIGQRIDR-HCQERGLLVRPLE 423 (466)
T ss_pred --CHHHHHHHHHHHHHHHHHHhccCCCEE-E-EEeeceEEEEEEccCccccCCCCchhHHHHHHHH-HHHHCCcEEeecC
Confidence 2334445555555555543 33222 1 2233667777774211 0000 01 123333 3567799997642
Q ss_pred CCCCCCeEEEEec--cChHHHHHHHHHHHHHHHHh
Q 014603 386 TVGLKDWLRITFA--VEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 386 ~~~~~~~iRis~~--~~~~~l~~~~~~l~~~~~~~ 418 (422)
+.+|+++. +++++|+++++++.++++++
T Consensus 424 -----~~~~l~Ppl~it~~~id~~~~~l~~al~~~ 453 (466)
T PRK07036 424 -----HLCVLSPPLIITRAQIDEIVAILRAAIEET 453 (466)
T ss_pred -----CEEEEeCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 57899976 69999999999999998776
No 312
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.86 E-value=9.1e-19 Score=167.39 Aligned_cols=343 Identities=15% Similarity=0.086 Sum_probs=208.2
Q ss_pred cCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHH
Q 014603 42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ 121 (422)
Q Consensus 42 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 121 (422)
.+|+.+|||..|...... -..+|.+.+++.+++.......+ +. +.+..+++.+.+..+ ..+.++|+++|++
T Consensus 50 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~q~~~~~~~~~-~~----~~~~~la~~l~~~~p---~~~~v~f~~sGse 120 (428)
T PRK12389 50 VDGNKYIDYLAAYGPIIT-GHAHPHITKAITEAAENGVLYGT-PT----ELEIEFAKMLKEAIP---SLEKVRFVNSGTE 120 (428)
T ss_pred CCCCEEEEcccccccccc-CCCCHHHHHHHHHHHHhCCccCC-CC----HHHHHHHHHHHHhCC---CCcEEEEeCCHHH
Confidence 368999999888655322 24678999999999986432222 22 334445555544322 2468999999999
Q ss_pred HHHHHHHHhcC--CCCEEEecCCCccchHHHHhhC-CCeEEEe------ecc--CCCC-c---ccCHHHHHHhhcC--Cc
Q 014603 122 AIEVILTVLAR--PGANILLPRPGFPYYEARATHS-HLEVRHF------DLL--PAKG-W---EVDLDAVEALADE--NT 184 (422)
Q Consensus 122 a~~~~~~~l~~--~gd~Vl~~~~~~~~~~~~~~~~-g~~~~~~------~~~--~~~~-~---~~d~~~l~~~~~~--~~ 184 (422)
|++.+++.... ...+|+....+||++...+... +...... ... ...+ . ..|++.+++.+.. +.
T Consensus 121 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 200 (428)
T PRK12389 121 AVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFNDIEALKEALDKWGDE 200 (428)
T ss_pred HHHHHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCCCCHHHHHHHHHhcCCc
Confidence 99999886432 2368999999999875544322 2111000 000 0000 0 1167888877742 34
Q ss_pred eEEEEeCC-CCCcccc-cCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCc
Q 014603 185 VALVIINP-GNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGW 262 (422)
Q Consensus 185 ~~i~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~ 262 (422)
.+.++..| ....|.+ +|.+.+++|.++|++||+++|+||++.++ ..+... ....++..+++ -+++|.+ ..|+
T Consensus 201 vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~-Rt~~~~-a~~~~gv~PDi---vt~gK~l-ggG~ 274 (428)
T PRK12389 201 VAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAF-RFMYGG-AQDLLGVEPDL---TALGKII-GGGL 274 (428)
T ss_pred EEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEcccccc-ccCcch-hhHHhCCCCCe---eeechhh-cCCC
Confidence 55666666 5556764 56788999999999999999999999987 443221 11122333333 3568995 5679
Q ss_pred eeEEEEeeCCCCcccchhHHHHHHh----hhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhc---
Q 014603 263 RLGWLVTSDPNGILQDSGIVDSIKS----FLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKE--- 335 (422)
Q Consensus 263 r~G~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~--- 335 (422)
++|.++++ +++++.+.. ....+.+.++++++++.+.|+...++ +..++++++-+++++.|++
T Consensus 275 Pi~av~~~--------~~i~~~~~~~~~~~~~~T~~gnpl~~Aaala~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~ 343 (428)
T PRK12389 275 PIGAYGGR--------KDIMEQVAPLGPAYQAGTMAGNPASMAAGIACLEVLQQE---GVYEKLDRLGAMLEEGILEAAE 343 (428)
T ss_pred ceeEEeEH--------HHHHhhhccCCCcccccCCccCHHHHHHHHHHHHHHhcc---cHHHHHHHHHHHHHHHHHHHHH
Confidence 99999875 467777642 12234577889999999998864322 2344455555555555543
Q ss_pred -CCCCCCCCCCCCceEEEEecCcccccC--------CCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEeccChHHHHH
Q 014603 336 -IPCITCPKKPEGSMFVMVKLNYSLLEG--------INSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALED 406 (422)
Q Consensus 336 -~~~~~~~~~~~~g~~~~~~~~~~~~~~--------~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~l~~ 406 (422)
+|.+. ......| ++.+.+....... ......+... +.++||.+.+.. .+.+.+++.++++++++
T Consensus 344 ~~~~~~-~v~r~~g-~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~Gv~~~~~~----~~~~~~~l~~t~e~id~ 416 (428)
T PRK12389 344 KHGITI-TINRLKG-ALTVYFTDEKVTNYDQAERSDGEAFGKFFKL-MLNQGINLAPSK----YEAWFLTTAHTEEDIEE 416 (428)
T ss_pred hCCCCE-EEEecCc-EEEEEEeCCCCCChhhhcccCHHHHHHHHHH-HHHCCcEeecCC----CCCeeecCCCCHHHHHH
Confidence 43221 1112234 3334442210000 0002234444 456799998753 12356666789999999
Q ss_pred HHHHHHHHHHH
Q 014603 407 GLGRMKAFYDR 417 (422)
Q Consensus 407 ~~~~l~~~~~~ 417 (422)
+++++++++++
T Consensus 417 ~~~~l~~~l~~ 427 (428)
T PRK12389 417 TLEAVDRAFAQ 427 (428)
T ss_pred HHHHHHHHHHh
Confidence 99999999865
No 313
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=99.86 E-value=3.2e-19 Score=157.23 Aligned_cols=348 Identities=18% Similarity=0.147 Sum_probs=229.6
Q ss_pred HhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCC--CCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCE
Q 014603 36 LENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSA--RFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDV 113 (422)
Q Consensus 36 ~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i 113 (422)
++++...+|+.++|+..|..+...+ ..+|.+.+++.+++..- ....|... -..++.+++++.+ +-+-+.+
T Consensus 41 ~~ylyDe~G~ryLD~f~Gi~tvslG-HchP~v~~a~~kQl~~l~H~t~~~~~~-pi~~~Ae~L~s~~------P~~l~~v 112 (442)
T KOG1404|consen 41 GQYLYDEEGRRYLDAFGGIVTVSLG-HCHPDVVAAAVKQLKKLYHTTSGYLNP-PIHDLAEALVSKL------PGDLKVV 112 (442)
T ss_pred eEEEEcCCCceeehhhCCeEEEEcC-CCChHHHHHHHHhhhhhEEeeccccCC-cHHHHHHHHHHhC------CCCceEE
Confidence 3455555799999999998765443 57899999999998542 23355543 3568888888887 5566789
Q ss_pred EEecCHHHHHHHHHHHhcC-CC-CEEEecCCCccchHHHHh-hCCCeEEEeecc-----------CC---CCccc-----
Q 014603 114 YLTLGCTQAIEVILTVLAR-PG-ANILLPRPGFPYYEARAT-HSHLEVRHFDLL-----------PA---KGWEV----- 171 (422)
Q Consensus 114 ~~~~g~~~a~~~~~~~l~~-~g-d~Vl~~~~~~~~~~~~~~-~~g~~~~~~~~~-----------~~---~~~~~----- 171 (422)
+|++||++|+++++..... -| -.++....+|++....+. ..+......+.. |. ..|+-
T Consensus 113 fF~nsGsEANelal~mar~Yt~~~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e 192 (442)
T KOG1404|consen 113 FFVNSGSEANELALKMARLYTGNLDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEE 192 (442)
T ss_pred EEecCCchHHHHHHHHHHHhcCCceEEEeeccccCCchhhcccccCCcccccCCCCCCcccccCCCCcccccCCCCchhh
Confidence 9999999999998876421 22 377888888887654433 223322222111 10 00000
Q ss_pred ----CHHHHHHhh---cCCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccC
Q 014603 172 ----DLDAVEALA---DENTVALVIINP-GNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG 242 (422)
Q Consensus 172 ----d~~~l~~~~---~~~~~~i~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~ 242 (422)
-.+++++.+ .+++.+.++..+ +...|++ +|+..+++..++|+++|.++|.||+++++.++| .+..++..+
T Consensus 193 ~~d~~a~~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRtG-~~wgfe~h~ 271 (442)
T KOG1404|consen 193 ASDRYAKELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRTG-HMWGFESHG 271 (442)
T ss_pred hHHHHHHHHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhcccccc-ccccccccC
Confidence 113444443 235677777777 5555654 788999999999999999999999999999888 444554444
Q ss_pred CCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhh--hhccCcchHHHHHHHHHHhhchHHHHHHHHH
Q 014603 243 SIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL--NISSDPATFIQGAVPQILEKTEEEFFSKITD 320 (422)
Q Consensus 243 ~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 320 (422)
. +--+-+++|. .+.|+++|.+++. +++.+-+.... ..+...++++.+++.+.|+...++.+.+..+
T Consensus 272 v---~PDIvTmAKg-iGnG~Pl~AVvtt--------~EIa~v~~~~~~~fnTyggnP~a~avg~aVL~Vikee~LqE~aa 339 (442)
T KOG1404|consen 272 V---VPDIVTMAKG-IGNGFPLGAVVTT--------PEIADVLNQKSSHFNTYGGNPVACAVGLAVLKVIKEENLQENAA 339 (442)
T ss_pred C---CccHHHHHhh-ccCCCcceeeecC--------HHHHHHHHhccccccccCCCchhHHHHHHHHHHHHHHhHHHHHH
Confidence 3 3446678899 5788999999986 67888876655 2356888999999999998766555554443
Q ss_pred HHHHHHHHHHHHhhcC----CCCCCCCCCCCceEEEEecCcccccCC--C-CHHHHHHHHHHhcCeEEecCCCCCCCCeE
Q 014603 321 ILRETADICCDRLKEI----PCITCPKKPEGSMFVMVKLNYSLLEGI--N-SDMEFALKLAKEESVIVLPGITVGLKDWL 393 (422)
Q Consensus 321 ~~~~~~~~l~~~L~~~----~~~~~~~~~~~g~~~~~~~~~~~~~~~--~-~~~~~~~~l~~~~gi~v~~g~~~~~~~~i 393 (422)
+.-.+|++.|.++ |-+- - ...-|.++.+++-....+.. . ....+..+.+++.|+.|.-|..++ +.+
T Consensus 340 ---~vG~yl~~~l~~l~d~h~iIG-d-VRG~GLm~GvE~V~dk~~~~pp~~~~~~~i~~~cke~Gvlvg~g~i~G--~vf 412 (442)
T KOG1404|consen 340 ---EVGSYLLEKLAALKDKHPIIG-D-VRGRGLMLGVELVSDKSEPKPPATAEGAVIGEQCKELGVLVGKGGIHG--NVF 412 (442)
T ss_pred ---HHHHHHHHHHHHHhhcCCcee-e-cccceeEEEEEEecccCCCCCcchHHHHHHHHHHHHhCeeeecccccc--eEE
Confidence 4444455555443 3232 1 23346777777643321111 0 112344555788899997777665 499
Q ss_pred EEEec--cChHHHHHHHHHH
Q 014603 394 RITFA--VEPSALEDGLGRM 411 (422)
Q Consensus 394 Ris~~--~~~~~l~~~~~~l 411 (422)
||++. .+.+|++.++...
T Consensus 413 riaPPlciT~edi~f~~~~~ 432 (442)
T KOG1404|consen 413 RIAPPLCITKEDIDFAVEYF 432 (442)
T ss_pred EecCCeeccHHHHHHHHHHH
Confidence 99987 7899997777754
No 314
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.86 E-value=8.4e-19 Score=168.03 Aligned_cols=342 Identities=14% Similarity=0.103 Sum_probs=206.5
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 122 (422)
+|+.+|||..|......+ ..+|.+.+++.+++.... .+.. ..+.+..+++.+.+..+ ..+.+.|+++|++|
T Consensus 97 dG~~yiD~~~g~g~~~lG-h~~p~v~~av~~ql~~~~--~~~~---~~~~~~~lAe~l~~~~p---~~~~v~f~~SGsEA 167 (474)
T PLN02482 97 DGNEYIDYVGSWGPAIIG-HADDEVLAALAETMKKGT--SFGA---PCLLENVLAEMVIDAVP---SVEMVRFVNSGTEA 167 (474)
T ss_pred CCCEEEEecccccccccC-CCCHHHHHHHHHHHhhCC--CCCC---CCHHHHHHHHHHHHhCC---CCCEEEEeCChHHH
Confidence 588899998887553333 457899999999998643 2222 12445556666655432 24799999999999
Q ss_pred HHHHHHHhc--CCCCEEEecCCCccchHHHHh-hC--CCeEE------EeeccCC-----CCcccCHHHHHHhhcC--Cc
Q 014603 123 IEVILTVLA--RPGANILLPRPGFPYYEARAT-HS--HLEVR------HFDLLPA-----KGWEVDLDAVEALADE--NT 184 (422)
Q Consensus 123 ~~~~~~~l~--~~gd~Vl~~~~~~~~~~~~~~-~~--g~~~~------~~~~~~~-----~~~~~d~~~l~~~~~~--~~ 184 (422)
.+.+++... ...++|+....+||++..... .. +.... .++.... -.+ -|++.+++.+.. +.
T Consensus 168 ~e~AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-nd~~~l~~~l~~~~~~ 246 (474)
T PLN02482 168 CMGVLRLARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPY-NDLEAVKKLFEANKGE 246 (474)
T ss_pred HHHHHHHHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecC-CChHHHHHHHHhCCCc
Confidence 999988643 123689999999999753211 10 00000 0000000 011 167888887753 34
Q ss_pred eEEEEeCC-CCCccccc-CHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCc
Q 014603 185 VALVIINP-GNPCGNVY-TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGW 262 (422)
Q Consensus 185 ~~i~i~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~ 262 (422)
.+.+|..| ....|.+. +++.++++.++|++||+++|+||++.++ +.+.. .....++..+++ .+++|.+ ..|+
T Consensus 247 iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGf-R~g~~-ga~~~~gv~PDi---~t~gK~l-ggG~ 320 (474)
T PLN02482 247 IAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGF-RIAYG-GAQEYFGITPDL---TTLGKVI-GGGL 320 (474)
T ss_pred eEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCe-ecCcc-hHhHHhCCCCCE---EEecchh-hCCC
Confidence 56677777 45567654 5788999999999999999999999876 44432 122223333333 3568996 4789
Q ss_pred eeEEEEeeCCCCcccchhHHHHHHhh----hhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCC-
Q 014603 263 RLGWLVTSDPNGILQDSGIVDSIKSF----LNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIP- 337 (422)
Q Consensus 263 r~G~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~- 337 (422)
++|.++++ +++++.+... ...+.+.+++.++++.+.|+...+ ++..++++++-+++++.|+++.
T Consensus 321 Pigav~g~--------~ei~~~~~~~~~~~~~~T~~gnpl~~aAala~L~~l~~---~~~~~~~~~~g~~l~~~L~~l~~ 389 (474)
T PLN02482 321 PVGAYGGR--------REIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLQQ---PGTYEYLDKITKKLIQGILEAGK 389 (474)
T ss_pred ceEEEEEc--------HHHHHhhccCCCcccccCcchhHHHHHHHHHHHHHHhc---cCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999875 5777777532 122345788888888888876432 2344555555555555555430
Q ss_pred --CCCCCCCCCCceEEEEecCcccc---cC--CCC---HHHHHHHHHHhcCeEEecCCCCCCCCeEEEEeccChHHHHHH
Q 014603 338 --CITCPKKPEGSMFVMVKLNYSLL---EG--INS---DMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALEDG 407 (422)
Q Consensus 338 --~~~~~~~~~~g~~~~~~~~~~~~---~~--~~~---~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~l~~~ 407 (422)
++.+......+++ .+.+..... .. ..+ ...+...+ .++||++.|.... .+ -+++.+++++|+++
T Consensus 390 ~~g~~~~~~~v~g~~-gi~f~~~~~~~~~~~~~~d~~~~~~~~~~l-~~~Gv~~~~~~~~---~~-~psl~ht~~dId~~ 463 (474)
T PLN02482 390 KAGHEMCGGYISGMF-GFFFTEGPVYNFADAKKSDTAKFARFHRGM-LEEGVYLAPSQFE---AG-FTSLAHTEEDIDFT 463 (474)
T ss_pred hcCCCEEEcccceEE-EEEEecCCccChhhhccCCHHHHHHHHHHH-HHCCeEEeccCCC---CC-cCCCCCCHHHHHHH
Confidence 1221112223333 232321100 00 001 12344444 5679999874321 11 15566899999999
Q ss_pred HHHHHHHHHH
Q 014603 408 LGRMKAFYDR 417 (422)
Q Consensus 408 ~~~l~~~~~~ 417 (422)
++++++++++
T Consensus 464 l~al~~~l~~ 473 (474)
T PLN02482 464 IAAAERVLAR 473 (474)
T ss_pred HHHHHHHHHh
Confidence 9999999865
No 315
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=99.85 E-value=2.1e-20 Score=163.40 Aligned_cols=289 Identities=15% Similarity=0.183 Sum_probs=184.8
Q ss_pred CCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCC----C--CEEEecCCCccchHHHHhhCCCeEEEe
Q 014603 88 GILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARP----G--ANILLPRPGFPYYEARATHSHLEVRHF 161 (422)
Q Consensus 88 g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~----g--d~Vl~~~~~~~~~~~~~~~~g~~~~~~ 161 (422)
..++|++.|.++....-..-.+...|++++|+|+.+++++.+|... + -.|+...|.|+.|......+.......
T Consensus 44 ~s~eL~~~Ir~LH~~VGNAvt~gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt~~f~s~~y~w 123 (363)
T PF04864_consen 44 ISPELERQIRRLHRVVGNAVTDGRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPEQTDFFDSRLYKW 123 (363)
T ss_dssp S-HHHHHHHHHHHHHH-SB--TTSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHCCCT-BTTEEE
T ss_pred ccHHHHHHHHHHHHHhccccccCcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHHHHHhccccCccc
Confidence 3578888888766543333345568999999999999999998543 1 389999999999988887665443332
Q ss_pred eccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCcccc
Q 014603 162 DLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF 241 (422)
Q Consensus 162 ~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~ 241 (422)
.- |...+...-+..+-+=++++||||.|.+ .+.++ +..+..+|.|-+|..-.|+. +..-
T Consensus 124 ~G--------da~~~~~~~~~~~~IElVTSPNNPDG~l-----r~~V~---~g~~~k~I~D~AYYWPhyTp-----I~~~ 182 (363)
T PF04864_consen 124 AG--------DASNFKNSDNPSPYIELVTSPNNPDGQL-----REAVL---NGSSGKVIHDLAYYWPHYTP-----ITAP 182 (363)
T ss_dssp EE--------ECCCGTT-S-CCGEEEEEESS-TTT-----------SS---TTTEEEEEEE-TT-STTTS--------S-
T ss_pred cc--------cHHhhccCCCCCCeEEEEeCCCCCcccc-----cchhc---CCCCcceeeeeeeecccccc-----cCCC
Confidence 21 2122211111234445899999999988 34444 35667789999998754442 2221
Q ss_pred CCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhhh-ccCcchHHHHHHHHHHhhchH--------
Q 014603 242 GSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQGAVPQILEKTEE-------- 312 (422)
Q Consensus 242 ~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~-------- 312 (422)
.+..+.++|+||.-|-+|.|+||.++.| +++..+|..+... +.+++.=+|.-+..+|+...+
T Consensus 183 --aD~DiMLFT~SK~TGHAGSR~GWAlVKD-------~~Va~kM~~y~~lnTiGvS~dsQLRa~kiLk~v~~~~~~~~~~ 253 (363)
T PF04864_consen 183 --ADHDIMLFTLSKLTGHAGSRFGWALVKD-------EEVAKKMTKYMELNTIGVSRDSQLRALKILKVVLDGYGTEKGT 253 (363)
T ss_dssp --B--SEEEEEHHHHCS-GGG-EEEEEES--------HHHHHHHHHHHHHHCSS--HHHHHHHHHHHHHHHHHCCHHTTT
T ss_pred --CCCceEEEEEecccCccccccceeeecC-------HHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHhcccCCCCc
Confidence 1223999999999899999999999986 6788888888754 447777888888887765321
Q ss_pred -HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCC------------CCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCe
Q 014603 313 -EFFSKITDILRETADICCDRLKEIPCITCPK------------KPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESV 379 (422)
Q Consensus 313 -~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~------------~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi 379 (422)
..+.--.+.+++|.+.|.+.++.-.-+.+.. ......|.|+++... ..+.+...+++.||
T Consensus 254 ~~~F~f~~~~M~~RW~~L~~~~~~S~rFSLq~~~~~yC~ff~~~~~psPafAWlkCe~e-------ed~DC~~~l~~~~I 326 (363)
T PF04864_consen 254 EDIFHFGYSTMRERWEKLRAAVSASKRFSLQKFSPQYCNFFKRVREPSPAFAWLKCERE-------EDEDCYAVLREAKI 326 (363)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHCCSSSEEE---SCEEETTTTCEEE---SEEEEEESSC-------GGSSHHHHHHCTTE
T ss_pred cchHHHHHHHHHHHHHHHHHHHHhcCceecCcCCchhccccccccCCCCCeEEEecCCc-------ccccHHHHHHhCCc
Confidence 2566667889999999999988531111110 112345999999753 22334556678899
Q ss_pred EEecCCCCCC-CCeEEEEeccChHHHHHHHHHHHH
Q 014603 380 IVLPGITVGL-KDWLRITFAVEPSALEDGLGRMKA 413 (422)
Q Consensus 380 ~v~~g~~~~~-~~~iRis~~~~~~~l~~~~~~l~~ 413 (422)
..+.|..|+. ..++|||+--++++++.++++|..
T Consensus 327 ~tr~G~~fga~~ryVRlSml~~~d~Fd~l~~rL~~ 361 (363)
T PF04864_consen 327 ITRSGVLFGADSRYVRLSMLKRDDDFDQLLERLSK 361 (363)
T ss_dssp EEEEGGGGTS-TTEEEEESSS-HHHHHHHHHHHHC
T ss_pred ccCCCCccCCCCCeEEEeccCCHHHHHHHHHHHHh
Confidence 9999999987 679999999999999999999875
No 316
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.85 E-value=7.5e-19 Score=167.61 Aligned_cols=342 Identities=16% Similarity=0.125 Sum_probs=211.5
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 122 (422)
+|+.++||..|......+ ..+|++.+++.+++.+......... ..+....+++.+.+..+ ...+.++++++|++|
T Consensus 43 dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~~~~~~~~~~~~~~--~~~~~~~la~~l~~~~~--~~~~~v~f~~sGseA 117 (427)
T TIGR00508 43 DGRRLIDGMSSWWAAIHG-YNHPRLNAAAQKQIDKMSHVMFGGF--THKPAIELCQKLVKMTP--NALDCVFLADSGSVA 117 (427)
T ss_pred CCCEEEEccchHHHhcCC-CCCHHHHHHHHHHHHhcCCcccccc--CCHHHHHHHHHHHhhCC--CCCCEEEEeCCcHHH
Confidence 688999999886554333 5678999999999876321111100 11223334444443222 234689999999999
Q ss_pred HHHHHHHhcC-------CC-CEEEecCCCccchHHHHhhC-CCe-------------EEEeeccCCCCc-----ccCHHH
Q 014603 123 IEVILTVLAR-------PG-ANILLPRPGFPYYEARATHS-HLE-------------VRHFDLLPAKGW-----EVDLDA 175 (422)
Q Consensus 123 ~~~~~~~l~~-------~g-d~Vl~~~~~~~~~~~~~~~~-g~~-------------~~~~~~~~~~~~-----~~d~~~ 175 (422)
++.+++.... +| .+|+....+|++....+... +.. ...++. +...+ .-|.++
T Consensus 118 ~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~ 196 (427)
T TIGR00508 118 VEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPA-PQNRFDEEWNEEAITP 196 (427)
T ss_pred HHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCC-CCccccchhHHHHHHH
Confidence 9998875431 23 68999999999875433322 211 011111 10111 013456
Q ss_pred HHHhhcC--CceEEEEeCC--CCCccc-ccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEE
Q 014603 176 VEALADE--NTVALVIINP--GNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTL 250 (422)
Q Consensus 176 l~~~~~~--~~~~i~i~~p--~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i 250 (422)
+++.+.. +..+.+++.| +...|. .++.+++++|.++|++||+++|+||++.++.++|..... ..++..++++
T Consensus 197 l~~~l~~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G~~~~~-~~~~v~pDi~-- 273 (427)
T TIGR00508 197 LAKLMELHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTGKLFAC-EHAGVVPDIL-- 273 (427)
T ss_pred HHHHHHhcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCccchh-hhcCCCCCEE--
Confidence 6666542 3456677777 455555 457899999999999999999999999887776654222 2223223333
Q ss_pred ecCccccCCCC-ceeEEEEeeCCCCcccchhHHHHHHhh------hhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHH
Q 014603 251 GSISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKSF------LNISSDPATFIQGAVPQILEKTEEEFFSKITDILR 323 (422)
Q Consensus 251 ~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 323 (422)
+++|.+ ..| ++++.++.+ +++++.+... ...+...++++.+++.++|+...+. +..++++
T Consensus 274 -~~gK~l-~gG~~p~~a~~~~--------~~~~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~l~~~---~~~~~~~ 340 (427)
T TIGR00508 274 -CVGKAL-TGGYMTLSATVTT--------DKVAQTISSGEAGCFMHGPTFMGNPLACAVAEASLAILLEG---EWQKQVS 340 (427)
T ss_pred -Eechhh-hcCcccceEEEEc--------HHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhC---CHHHHHH
Confidence 368997 567 478888875 4677777542 1223356788888888888753321 3346666
Q ss_pred HHHHHHHHHhhcCCCCCCC-CCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cC
Q 014603 324 ETADICCDRLKEIPCITCP-KKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VE 400 (422)
Q Consensus 324 ~~~~~l~~~L~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~ 400 (422)
++.+++++.|+++...... ....-|.+..+.+... .....+..++ .++||.+.+.. +.+|++++ ++
T Consensus 341 ~~~~~l~~~L~~l~~~~~i~~vrg~G~~~~i~~~~~-----~~~~~~~~~l-~~~Gv~~~~~~-----~~l~~~ppl~~t 409 (427)
T TIGR00508 341 AIENQLKRELSPLRKNPVVKDVRVLGAIGVVEMYKP-----VNVEELQKKF-VEQGVWIRPFG-----KLIYVMPPYIIT 409 (427)
T ss_pred HHHHHHHHHHHHhhcCCCEEeEeccccEEEEEECCc-----cCHHHHHHHH-HHCCeEEEecC-----CEEEEECCCCCC
Confidence 6667777777665211101 0112255666666421 1344555554 56799997642 47999987 78
Q ss_pred hHHHHHHHHHHHHHHHH
Q 014603 401 PSALEDGLGRMKAFYDR 417 (422)
Q Consensus 401 ~~~l~~~~~~l~~~~~~ 417 (422)
+++|+++++++++++.+
T Consensus 410 ~~~id~~~~~l~~~l~~ 426 (427)
T TIGR00508 410 TEQLQKLTAALIEALHE 426 (427)
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 99999999999999864
No 317
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.85 E-value=1.7e-18 Score=152.77 Aligned_cols=324 Identities=16% Similarity=0.177 Sum_probs=227.9
Q ss_pred CCCCCCcHHHHHHHHHHhhCCCC------CCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhc
Q 014603 58 FPSFRTASVAVDAIVHSVRSARF------NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLA 131 (422)
Q Consensus 58 ~~~~~~~~~v~~a~~~~~~~~~~------~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~ 131 (422)
|.+...+|.|.+||++.++.... +--+......+|++.+|++-+ .+..++.++.--|+...+..|.
T Consensus 181 YLgms~Hp~V~~A~~~tl~~hG~GAGGTRNIsG~s~~hv~LE~eLA~LHq--------K~aALlFsSCfVANDstLftLa 252 (570)
T KOG1360|consen 181 YLGMSRHPEVLDAMHDTLDRHGAGAGGTRNISGHSKHHVRLEAELADLHQ--------KEAALLFSSCFVANDSTLFTLA 252 (570)
T ss_pred cccccCChHHHHHHHHHHHHcCCCcCCccccCCCCchhhhHHHHHHHHhc--------CcceeeeeeeeeccchHHHHHH
Confidence 56667899999999999986321 111223446789999999873 3445555565666666666553
Q ss_pred --CCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC----CceEEEEeCCCCCcccccCHHHH
Q 014603 132 --RPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE----NTVALVIINPGNPCGNVYTYQHL 205 (422)
Q Consensus 132 --~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~----~~~~i~i~~p~nptG~~~~~~~l 205 (422)
-||-+|+.....|.+.....+..+.+-..+..+ |++.|++++.. -++++.+...+..+|.+. ++
T Consensus 253 k~lpgcei~SD~gNHASMI~GIrns~v~K~IFrHN-------D~~hL~~lL~~~~~svPKivAFEtVhSM~Gavc---pl 322 (570)
T KOG1360|consen 253 KKLPGCEIFSDEGNHASMIQGIRNSRVPKHIFRHN-------DLDHLEQLLQSSPKSVPKIVAFETVHSMDGAVC---PL 322 (570)
T ss_pred HHCCCcEEeccccchHHHHHHhhhcCCcceeeccC-------CHHHHHHHHHhCCCCCCceEEEeeeeccCCCcC---CH
Confidence 388999999999998888888888776665532 67777776643 467788889999999995 57
Q ss_pred HHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCC-eEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHH
Q 014603 206 QKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP-VLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDS 284 (422)
Q Consensus 206 ~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~-~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~ 284 (422)
++|++++++||.+-++||++....|+.++..--+.-+.-++ .|+.+++.|.||+-| ||+... ..+++.
T Consensus 323 eelcDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsGTLgKafGcVG---GYIAat--------~~LvDm 391 (570)
T KOG1360|consen 323 EELCDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISGTLGKAFGCVG---GYIAAT--------RKLVDM 391 (570)
T ss_pred HHHHHHHHHhCceeeeehhhhhccccCCCCCccccCCcchhhhhcccchhhhccccc---ceehhh--------hhHHHH
Confidence 88888999999999999999987776544322111111112 388899999999888 999875 357777
Q ss_pred HHhhhh---hccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCccccc
Q 014603 285 IKSFLN---ISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLE 361 (422)
Q Consensus 285 ~~~~~~---~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 361 (422)
++.+.. ++.+.++..+..+.++.+....+.-...++..+++..++++.|.++ |+.+. |....++-+++.+.
T Consensus 392 iRSyAaGFIFTTSLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~~-GiPVi--~~pSHIiPv~vgda--- 465 (570)
T KOG1360|consen 392 IRSYAAGFIFTTSLPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLMEL-GIPVI--PNPSHIIPVRVGDA--- 465 (570)
T ss_pred HHHhcCceEEecCCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHc-CCccc--CCCcceeeeeccCH---
Confidence 776642 2334455566666666654332222445566778888899999988 77643 33334555555432
Q ss_pred CCCCHHHHHHHHHHhcCeEEecCCCCCC---CCeEEEEec--cChHHHHHHHHHHHHHHHHh
Q 014603 362 GINSDMEFALKLAKEESVIVLPGITVGL---KDWLRITFA--VEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 362 ~~~~~~~~~~~l~~~~gi~v~~g~~~~~---~~~iRis~~--~~~~~l~~~~~~l~~~~~~~ 418 (422)
..+.+..+.|+.+++|+|....++.. ...+||.++ .+++.++.+++.+..++.++
T Consensus 466 --~l~~~~sd~Li~~h~iYvQaINyPTV~rG~E~LRiaPTP~HT~~mm~~lv~~l~~vw~~v 525 (570)
T KOG1360|consen 466 --ALAKQASDILISKHNIYVQAINYPTVARGTERLRIAPTPHHTPQMMNILVNALLDVWNEV 525 (570)
T ss_pred --HHHHHHHHHHHHhcCeEEEeccCCcccccceeeecCCCCCCCHHHHHHHHHHHHHHHHHc
Confidence 13556777888999999998877655 457999987 78899999999999988765
No 318
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.85 E-value=5.2e-18 Score=162.90 Aligned_cols=357 Identities=15% Similarity=0.097 Sum_probs=210.5
Q ss_pred cCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCC-CCCEEEecCHH
Q 014603 42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLS-PDDVYLTLGCT 120 (422)
Q Consensus 42 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~-~~~i~~~~g~~ 120 (422)
.+|+.+|||..|......+ ..+|++.+++.+++......... ....+.+..+++.|....+.... ...++++++|+
T Consensus 55 ~dG~~ylD~~~g~~~~~lG-H~~p~v~~Ai~~q~~~~~~~~~~--~~~~~~~~~lAe~L~~~~p~~~~~~~~~f~~~SGs 131 (459)
T PRK06931 55 VEGNQYLDCLAGAGTLALG-HNHPDVLQSIQDVLTSGLPLHTL--DLTTPLKDAFSEYLLSLLPGQGKEYCLQFTGPSGA 131 (459)
T ss_pred CCCCEEEEcccchhhccCC-CCCHHHHHHHHHHHhhhcccccc--ccCCHHHHHHHHHHHHhCCCccccceEEEeCCCcH
Confidence 4689999999987553333 46789999999998752211111 11234555566666543321101 12346668999
Q ss_pred HHHHHHHHHhc--CCCCEEEecCCCccchHHHHhhCCC-------------eEEEeeccCCC--Ccc----cCHHHH---
Q 014603 121 QAIEVILTVLA--RPGANILLPRPGFPYYEARATHSHL-------------EVRHFDLLPAK--GWE----VDLDAV--- 176 (422)
Q Consensus 121 ~a~~~~~~~l~--~~gd~Vl~~~~~~~~~~~~~~~~g~-------------~~~~~~~~~~~--~~~----~d~~~l--- 176 (422)
+|++.+++... ...++|+....+||++...+..... ++..++..... .+. -+.+.+
T Consensus 132 EAve~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (459)
T PRK06931 132 DAVEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYY 211 (459)
T ss_pred HHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccccccCCchhHHHHHHHH
Confidence 99999988642 2336899999999988655553211 12222221100 000 012222
Q ss_pred -HHhhc-----CCceEEEEeCC-CCCccc-ccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeE
Q 014603 177 -EALAD-----ENTVALVIINP-GNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVL 248 (422)
Q Consensus 177 -~~~~~-----~~~~~i~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i 248 (422)
++.+. .+..+.+|..| +...|. .+|.+.++++.++|++||+++|.||++.++.++|... ....++..++++
T Consensus 212 ~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~~~-a~~~~gv~PDiv 290 (459)
T PRK06931 212 FENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTGKMF-AFEHAGIEPDII 290 (459)
T ss_pred HHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCchHH-HhhhcCCCCCEE
Confidence 33332 13456677777 444565 4678889999999999999999999999987777532 233344334444
Q ss_pred EEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhh-hhhccCcchHHHHHHHHHHhhchHH-HHHHHHHHHHHHH
Q 014603 249 TLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSF-LNISSDPATFIQGAVPQILEKTEEE-FFSKITDILRETA 326 (422)
Q Consensus 249 ~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~ 326 (422)
+ ++|.+ ..|+++|.++.++ + ++.+... ...+.+.++++++++.+.|+...++ .+++..+.-...+
T Consensus 291 t---~gK~l-~gG~Pi~av~~~~--------~-~~~~~~~~~~~T~~gnpla~aaala~L~~l~~~~l~~~~~~~G~~l~ 357 (459)
T PRK06931 291 V---MSKAV-GGGLPLAVLGIKK--------E-FDAWQPGGHTGTFRGNQLAMATGLTTLKILKEENLAQNAAERGEWLK 357 (459)
T ss_pred E---ecccc-cCCcceeeeeeHH--------H-HhhccCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 4 47995 5679999888742 2 2433222 2334578899999999998864432 2233222223333
Q ss_pred HHHHHHhhcCCCCCCCCCCCCceEEEEecCccc-cc----CCC-C---HHHHHHHHHHhcCeEEecCCCCCCCCeEEEEe
Q 014603 327 DICCDRLKEIPCITCPKKPEGSMFVMVKLNYSL-LE----GIN-S---DMEFALKLAKEESVIVLPGITVGLKDWLRITF 397 (422)
Q Consensus 327 ~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~-~~----~~~-~---~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~ 397 (422)
+.|.+..+++|.+. . ...-|.++.+.+.... .. ... + ...+... +.++|+++.++.. ..+.+|+.+
T Consensus 358 ~~L~~l~~~~~~i~-~-vrG~Glm~giel~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Gvl~~~~~~--~~~~l~~~P 432 (459)
T PRK06931 358 AQLAELQKRYPCIG-N-VRGRGLMIGIEIVDERQPADAMGSYPADGELAAAIQKA-CFENGLLLERGGR--NGNVVRLLP 432 (459)
T ss_pred HHHHHHHHhCCCeE-e-EecCceEEEEEEccCcccccccccCCccHHHHHHHHHH-HHHCCcEEeecCC--CCCEEEEEC
Confidence 33333323444332 1 2334667777763210 00 000 0 1233333 4567999976432 147899888
Q ss_pred c--cChHHHHHHHHHHHHHHHHhcc
Q 014603 398 A--VEPSALEDGLGRMKAFYDRHAK 420 (422)
Q Consensus 398 ~--~~~~~l~~~~~~l~~~~~~~~~ 420 (422)
+ .++++++++++++.+++.+..|
T Consensus 433 pl~it~~eid~~~~~l~~~l~~~~~ 457 (459)
T PRK06931 433 PLLITQAECEEFIDRFEQALLAAVK 457 (459)
T ss_pred CCCcCHHHHHHHHHHHHHHHHHHHh
Confidence 7 7999999999999999988654
No 319
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.85 E-value=1.2e-18 Score=165.77 Aligned_cols=348 Identities=12% Similarity=0.037 Sum_probs=205.3
Q ss_pred cCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHH
Q 014603 42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ 121 (422)
Q Consensus 42 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 121 (422)
.+|+.+|||..|......+ ..+|.+.+++.+++.......+ + .+.+..+++.+.+..+ ...+.++|+++|++
T Consensus 50 ~dG~~yiD~~~g~~~~~lG-h~~p~v~~ai~~q~~~~~~~~~-~----~~~~~~la~~L~~~~~--~~~~~v~f~~SGsE 121 (433)
T PRK00615 50 SLGKTFIDFCGSWGSLIHG-HSHPKICDAIQQGAERGTSYGL-T----SEQEILFAEELFSYLG--LEDHKIRFVSSGTE 121 (433)
T ss_pred CCCCEEEEcccchhccccC-CCCHHHHHHHHHHHHhCCCCCC-C----CHHHHHHHHHHHHhCC--CCcCEEEEeCchHH
Confidence 3689999999887553222 4589999999999976432111 1 1233344444443222 22368999999999
Q ss_pred HHHHHHHHhcC--CCCEEEecCCCccchHHH---HhhCCCeE-----EEeeccCCCCc-----ccCHHHHHHhhcC--Cc
Q 014603 122 AIEVILTVLAR--PGANILLPRPGFPYYEAR---ATHSHLEV-----RHFDLLPAKGW-----EVDLDAVEALADE--NT 184 (422)
Q Consensus 122 a~~~~~~~l~~--~gd~Vl~~~~~~~~~~~~---~~~~g~~~-----~~~~~~~~~~~-----~~d~~~l~~~~~~--~~ 184 (422)
|++.+++.... ...+|+....+||++... +....... ......+.... .-|++.+++.+.. +.
T Consensus 122 A~e~AiklAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 201 (433)
T PRK00615 122 ATMTAVRLARGITGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMNSLGHR 201 (433)
T ss_pred HHHHHHHHHHHhhCCCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhcCCc
Confidence 99999886532 236899999999986521 11111000 00000000000 0167788877642 34
Q ss_pred eEEEEeCC-CCCcccc-cCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCc
Q 014603 185 VALVIINP-GNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGW 262 (422)
Q Consensus 185 ~~i~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~ 262 (422)
.+++++.| ....|.. ++++.+++|.++|++||+++|+||++.++ +.|.. .....++..++++ +++|.+ ..|+
T Consensus 202 ~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~-R~G~~-ga~~~~gv~PDi~---~~gK~l-ggG~ 275 (433)
T PRK00615 202 VAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGF-RVAQG-GAAAIYHVKPDIT---VYGKIL-GGGL 275 (433)
T ss_pred eEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccccc-cccHh-HHHHhcCCCCCeE---EEcccc-cCCc
Confidence 55667777 4445664 56788999999999999999999999876 44432 1122233333333 368996 4568
Q ss_pred eeEEEEeeCCCCcccchhHHHHHHhhh----hhccCcchHHHHHHHHHHhhchH-HHHHHHHHHHHHHHHHHHHHhhcCC
Q 014603 263 RLGWLVTSDPNGILQDSGIVDSIKSFL----NISSDPATFIQGAVPQILEKTEE-EFFSKITDILRETADICCDRLKEIP 337 (422)
Q Consensus 263 r~G~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~ 337 (422)
++|+++++ +++++.+.... ..+.+.+++.++++.+.|+...+ ..+++..+.-...++.+.+.+++.
T Consensus 276 p~~av~~~--------~~i~~~~~~~~~~~~~~T~~g~p~~~aa~la~L~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~- 346 (433)
T PRK00615 276 PAAAVVAH--------KSIMDHLAPEGTIFQAGTLSGNPLAMAAGKASINLCREQGFYTQLSTLEQNFLSPIEEMIRSQ- 346 (433)
T ss_pred ceeeeeec--------HHHHhhhcCCCCcccCCCCcccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHc-
Confidence 89999986 46777764321 12345688889999998886432 223333333333333334444442
Q ss_pred CCCCCCCCCCceEEEEecCcccc---cCC-----CCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEeccChHHHHHHHH
Q 014603 338 CITCPKKPEGSMFVMVKLNYSLL---EGI-----NSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALEDGLG 409 (422)
Q Consensus 338 ~~~~~~~~~~g~~~~~~~~~~~~---~~~-----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~l~~~~~ 409 (422)
++.+.... -|.++.+.+..... ... .....+...+ .++||++.|..... + =+|..+++++|+++++
T Consensus 347 g~~v~~~r-~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~~~~~~~~~---~-~ls~~ht~~did~~~~ 420 (433)
T PRK00615 347 GFPVSLVR-YGSMFSFFFNENRPNNLAEAQLSDIEAFQTFYQSA-FSKGVYLSPSPFEA---S-FLSSAHSMENLDYAQN 420 (433)
T ss_pred CCCeEEEe-eceEEEEEEeCCCCCChHHHhhCCHHHHHHHHHHH-HHCCeeecCccccc---c-ceecCCCHHHHHHHHH
Confidence 22211122 46666666643210 000 0012344444 56799998764211 1 3566689999999999
Q ss_pred HHHHHHHHh
Q 014603 410 RMKAFYDRH 418 (422)
Q Consensus 410 ~l~~~~~~~ 418 (422)
++++++.+.
T Consensus 421 a~~~~~~~~ 429 (433)
T PRK00615 421 VLIDSLEKV 429 (433)
T ss_pred HHHHHHHHH
Confidence 999999875
No 320
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.85 E-value=4.1e-18 Score=156.34 Aligned_cols=282 Identities=19% Similarity=0.171 Sum_probs=196.0
Q ss_pred CCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHH----HHhhCCCeEEEee
Q 014603 87 VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEA----RATHSHLEVRHFD 162 (422)
Q Consensus 87 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~----~~~~~g~~~~~~~ 162 (422)
+....++++++++- ..+..+.+++|++|+..++.+++++||.|++++..|.+... ..+..|+++..+.
T Consensus 63 PT~~~lE~~~a~LE--------g~~~~~afsSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~d 134 (396)
T COG0626 63 PTRDALEEALAELE--------GGEDAFAFSSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFVD 134 (396)
T ss_pred ccHHHHHHHHHHhh--------CCCcEEEecCcHHHHHHHHHHhcCCCCEEEecCCccchHHHHHHHHHHhcCeEEEEEC
Confidence 34567888888875 45788999999999999999999999999999999977644 3445677776554
Q ss_pred ccCCCCcccCHHHHHHhhc-CCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCcccc
Q 014603 163 LLPAKGWEVDLDAVEALAD-ENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF 241 (422)
Q Consensus 163 ~~~~~~~~~d~~~l~~~~~-~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~ 241 (422)
. .+.+.+++.+. ++++++++..|+||+-.+ .||.+|+++|+++|+++|+|..+....+ ..+ ..+
T Consensus 135 ~-------~~~~~~~~~~~~~~tk~v~lEtPsNP~l~v---~DI~~i~~~A~~~g~~vvVDNTfatP~~----q~P-L~~ 199 (396)
T COG0626 135 P-------GDDEALEAAIKEPNTKLVFLETPSNPLLEV---PDIPAIARLAKAYGALVVVDNTFATPVL----QRP-LEL 199 (396)
T ss_pred C-------CChHHHHHHhcccCceEEEEeCCCCccccc---ccHHHHHHHHHhcCCEEEEECCcccccc----cCh-hhc
Confidence 2 24456666666 599999999999999888 6899999999999999999999876332 112 234
Q ss_pred CCCCCeEEEecCccccCCCC-ceeEEEEeeCCCCcccchhHHHHHHhhhh--hccCcchHHHHHHHHHHhhchHHHHHHH
Q 014603 242 GSIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKSFLN--ISSDPATFIQGAVPQILEKTEEEFFSKI 318 (422)
Q Consensus 242 ~~~~~~i~i~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~ 318 (422)
+.| |++.|.+|.+++-+ .=.|.+++++ +++.+.+..... .....++...+.+..-|+. +.-+
T Consensus 200 GaD---IVvhSaTKyl~GHsDvl~G~v~~~~-------~~~~~~~~~~~~~~~G~~l~p~dA~l~lRGlkT-----L~~R 264 (396)
T COG0626 200 GAD---IVVHSATKYLGGHSDVLGGVVLTPN-------EELYELLFFAQRANTGAVLSPFDAWLLLRGLRT-----LALR 264 (396)
T ss_pred CCC---EEEEeccccccCCcceeeeEEecCh-------HHHHHHHHHHHHhhcCCCCCHHHHHHHHhccch-----HHHH
Confidence 444 99999999986644 4456555543 455555533322 3446677888877777765 6667
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCCCC----------------CceEEEEecCcccccCCCCHHHHHHHHHHhcCeEE-
Q 014603 319 TDILRETADICCDRLKEIPCITCPKKPE----------------GSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIV- 381 (422)
Q Consensus 319 ~~~~~~~~~~l~~~L~~~~~~~~~~~~~----------------~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v- 381 (422)
.++..++...+.+.|++.|.+.-+.+|. .|-.+.+.+.. . +.+..+++.-.+..
T Consensus 265 m~~~~~nA~~IA~~L~~~p~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~--------~-~~~~~f~~~L~l~~~ 335 (396)
T COG0626 265 MERHNENALKIAEFLADHPKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKN--------E-EAAKKFLDSLKLFKL 335 (396)
T ss_pred HHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCC--------h-HHHHHHHHhCCccEE
Confidence 7888888999999999988876555663 34455566653 1 22333333333332
Q ss_pred --ecCCCC----------------------CC-CCeEEEEeccChHHHHHHHHHHHHHHHH
Q 014603 382 --LPGITV----------------------GL-KDWLRITFAVEPSALEDGLGRMKAFYDR 417 (422)
Q Consensus 382 --~~g~~~----------------------~~-~~~iRis~~~~~~~l~~~~~~l~~~~~~ 417 (422)
.-|... +. ++.+|+|++. |+++.++..|+++++.
T Consensus 336 a~SlGgveSLi~~pa~~th~~~~~~~r~~~Gi~~~LvRlSVGl--Ed~eDLi~Dl~~Al~~ 394 (396)
T COG0626 336 AESLGGVESLISHPATMTHASIPLEERAKAGITDGLVRLSVGL--EDVEDLIADLEQALAK 394 (396)
T ss_pred eccCCCcccccccccccCcccCCHhHHHhcCCCCCeEEEEecC--CCHHHHHHHHHHHHHh
Confidence 112111 01 5789999997 4666667777777765
No 321
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.85 E-value=4.7e-19 Score=165.64 Aligned_cols=313 Identities=12% Similarity=0.060 Sum_probs=200.8
Q ss_pred CCcHHHHHHHHHHhhCCC-CCCCCC--CCCCHHHHHHHHHHHhhcCCCCCC-CCCEEEe-cCHHHHHHHHHHHhcCCCCE
Q 014603 62 RTASVAVDAIVHSVRSAR-FNCYSS--TVGILPARRAIADYLNRDLPYKLS-PDDVYLT-LGCTQAIEVILTVLARPGAN 136 (422)
Q Consensus 62 ~~~~~v~~a~~~~~~~~~-~~~y~~--~~g~~~lr~~ia~~l~~~~~~~~~-~~~i~~~-~g~~~a~~~~~~~l~~~gd~ 136 (422)
..++++++++.+....-. .+.+.+ ...+.+.|+.++++++ +. ..+|+|+ +|+|.+++.++.+++.+ +.
T Consensus 13 ~~~~~v~~a~~~~~~~~~~~~hr~~~f~~~~~~~r~~l~~l~~------~~~~~~v~f~~gs~T~a~~~~~~~l~~~-~~ 85 (361)
T TIGR01366 13 KVRLEQLQALTTTAASLFGTSHRQAPVKNLVGRVREGLAELFS------LPDGYEVILGNGGATAFWDAATFGLIEK-KS 85 (361)
T ss_pred CCCHHHHHHHHhcCccccccCcCChHHHHHHHHHHHHHHHHhC------CCCCceEEEECCchhHHHHHHHHhcccc-cc
Confidence 567899999876421100 112222 2346788889999883 33 3478876 66999999999998743 33
Q ss_pred EEecCCCcc-chHHHHhhC--CCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHH
Q 014603 137 ILLPRPGFP-YYEARATHS--HLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAK 213 (422)
Q Consensus 137 Vl~~~~~~~-~~~~~~~~~--g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~ 213 (422)
+++....|. .+...+... +.++..++... +..++ ..+.++++++.+++..|.||+..|.++ | ++
T Consensus 86 l~i~~G~~~~~~~~~a~~~~~~~~~~~~~~~~--~~~~~-----~~~~~~~~lV~~~h~et~tG~~~pi~~---I---~~ 152 (361)
T TIGR01366 86 LHLSFGEFSSKFAKAVKLAPWLGEPIIVTADP--GSAPE-----PQADPGVDVIAWAHNETSTGVAVPVRR---P---EG 152 (361)
T ss_pred cEEecCHHHHHHHHHHHhhhccCCceEEecCC--CCCCC-----CccCCCCCEEEEcccCCccceeccccc---c---cc
Confidence 344444442 334444432 22556665432 21222 234668999999999999999976544 4 47
Q ss_pred HcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhh-----
Q 014603 214 KLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSF----- 288 (422)
Q Consensus 214 ~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~----- 288 (422)
++|+++++|.+++. |..+.++.. .| ++++|.+|+++++|- ++.++.+ ++..+++...
T Consensus 153 ~~g~~~iVDavqs~----g~~~idv~~--~D---~~~~s~~K~lg~~~G-l~~~~~s--------~~~~~~~~~~~~~~~ 214 (361)
T TIGR01366 153 SDDALVVIDATSGA----GGLPVDIAE--TD---VYYFAPQKNFASDGG-LWLAIMS--------PAALERIEAIAASGR 214 (361)
T ss_pred cCCCeEEEEcCccc----cCCCCCHHH--CC---EEEEEchhhcCCCCc-eEEEEEC--------HHHHhhhhcccCCCC
Confidence 89999999999987 444445443 22 788999999988741 5555554 2333333210
Q ss_pred -----------------hhhccCcchHHHHHHHHHHhhchHH-HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC---C
Q 014603 289 -----------------LNISSDPATFIQGAVPQILEKTEEE-FFSKITDILRETADICCDRLKEIPCITCPKKPE---G 347 (422)
Q Consensus 289 -----------------~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~---~ 347 (422)
....++++....+++.++++...+. .++...++.+++.+.+++.|++++.+....... .
T Consensus 215 ~~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s 294 (361)
T TIGR01366 215 WVPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKRS 294 (361)
T ss_pred CCchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcc
Confidence 0123455556666777777765544 478888999999999999999986555331111 1
Q ss_pred ceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHHHHHHHHHh
Q 014603 348 SMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 348 g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~l~~~~~~~ 418 (422)
.....+.++.+ .+..++...+ +++||.+.++...-..+.+|||+. ++.++++++++.|+++++++
T Consensus 295 ~~v~~v~~~~g-----~~~~~v~~~L-~~~gI~i~~~~~~l~~~~vRis~~~~~t~~di~~l~~al~~~~~~~ 361 (361)
T TIGR01366 295 QVVGTIDFVDD-----IDAATVAKIL-RANGIVDTEPYRKLGRNQLRVAMFPAIDPDDVEALTECVDWVVERL 361 (361)
T ss_pred cceEEEECCCc-----cCHHHHHHHH-HHCCCeeccCccccCCCcEEEEcCCCCCHHHHHHHHHHHHHHHhhC
Confidence 11222334321 2566666666 667999987653222568999997 78999999999999988753
No 322
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.85 E-value=3e-18 Score=159.99 Aligned_cols=278 Identities=14% Similarity=0.124 Sum_probs=183.8
Q ss_pred CCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchH----HHHhhCCCeEEEee
Q 014603 87 VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYE----ARATHSHLEVRHFD 162 (422)
Q Consensus 87 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~----~~~~~~g~~~~~~~ 162 (422)
+...++++.++++. ..+..+.+++|++|+.+++.+++++||+|+++.+.|.+.. ..+...|++++.++
T Consensus 64 P~~~~lE~~la~le--------g~~~av~~sSG~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~fvd 135 (384)
T PRK06434 64 PTVQAFEEKYAVLE--------NAEHALSFSSGMGAITSAILSLIKKGKRILSISDLYGQTFYFFNKVLKTLGIHVDYID 135 (384)
T ss_pred hhHHHHHHHHHHHh--------CCCcEEEeCCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHHhcCcEEEEEC
Confidence 44678899999987 3356888999999999999999999999999888765543 55667899998887
Q ss_pred ccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccC
Q 014603 163 LLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG 242 (422)
Q Consensus 163 ~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~ 242 (422)
+++.+.+.++ .++++++++..|.||++.+ .++++|.++|++++ +++|.+++.. +.+ .++. .+
T Consensus 136 ~~~~~~~~l~--------~~~tklv~~e~~snpt~~v---~Di~~I~~la~~~~--lvVD~t~~s~-~~~---~pl~-~g 197 (384)
T PRK06434 136 TDRLNSLDFD--------PSNYDLIYAESITNPTLKV---PDIKNVSSFCHEND--VIVDATFASP-YNQ---NPLD-LG 197 (384)
T ss_pred CCChhheeec--------CCCeeEEEEEcCCCCCcee---ecHHHHHHHHHHcC--eEEECCCCCc-ccC---Cchh-cC
Confidence 6532222221 1268899999999999988 57999999999998 4669997431 111 1222 23
Q ss_pred CCCCeEEEecCccccCCCC-ceeEEEEeeCCCCcccchhHHHHHHhhh-hhccCcchHHHHHHHHHHhhchHHHHHHHHH
Q 014603 243 SIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQGAVPQILEKTEEEFFSKITD 320 (422)
Q Consensus 243 ~~~~~i~i~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 320 (422)
.| +++.|.+|.++++| .=.|.+++++ +++.++++... ......+++..+.+..-|+. +..+.+
T Consensus 198 aD---ivv~S~tK~i~G~~d~~gG~vv~~~-------~~~~~~~~~~~~~~G~~~~~~~A~l~~~gL~t-----L~~R~~ 262 (384)
T PRK06434 198 AD---VVIHSATKYISGHSDVVMGVAGTNN-------KSIFNNLVERRKTLGSNPDPIQAYLALRGLKT-----LGLRME 262 (384)
T ss_pred CC---EEEeecccccCCCCCceEEEEecCc-------HHHHHHHHHHHHhcCCCCCHHHHHHHHhCCCc-----HHHHHH
Confidence 33 88999999987655 3346666543 35656655443 22234455555555555554 677888
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCC----------CceEEEEecCcccccCCCCHHHHHHHHHHhcCeE---EecCCC-
Q 014603 321 ILRETADICCDRLKEIPCITCPKKPE----------GSMFVMVKLNYSLLEGINSDMEFALKLAKEESVI---VLPGIT- 386 (422)
Q Consensus 321 ~~~~~~~~l~~~L~~~~~~~~~~~~~----------~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~---v~~g~~- 386 (422)
+.+++...+.+.|+.+|.+.-+.+|. .|..+.+.++. .+.+.+++++-.+. +.-|..
T Consensus 263 r~~~~a~~~a~~L~~~p~v~~V~yPgl~~~~~~~~g~g~~~sf~l~~---------~~~~~~f~~~l~l~~~~~slG~~~ 333 (384)
T PRK06434 263 KHNKNGMELARFLRDSKKISNVYYPDTEIGKKVLRGFGGMLSFELRS---------MEDVHKFIRNLEIPMVAASLGGVE 333 (384)
T ss_pred HHHHHHHHHHHHHHcCCCccEEECCChHHHHHhcCCCCceEEEEECC---------HHHHHHHHHhCCcceEccCCCCCC
Confidence 88999999999999998875455554 23445555642 12223333333332 111110
Q ss_pred ---------------------CCC-CCeEEEEeccChHHHHHHHHHHHHHHH
Q 014603 387 ---------------------VGL-KDWLRITFAVEPSALEDGLGRMKAFYD 416 (422)
Q Consensus 387 ---------------------~~~-~~~iRis~~~~~~~l~~~~~~l~~~~~ 416 (422)
.+. ++.||+|++. |+.+.+++.|.+++.
T Consensus 334 sl~~~p~~~~h~~~~~e~~~~~gi~~~liRlsvGl--Ed~~dLi~dl~~Al~ 383 (384)
T PRK06434 334 SLITLPVETSHSSLSPEERERLGISDNLVRFSIGI--EDIDDLIKDIENALS 383 (384)
T ss_pred eeeECCCccccccCCHHHHHhcCCCcCeEEEEeCc--CCHHHHHHHHHHHhc
Confidence 001 4689999997 467777778777764
No 323
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.84 E-value=1.2e-17 Score=154.94 Aligned_cols=335 Identities=16% Similarity=0.142 Sum_probs=215.8
Q ss_pred CCceeecCCCCCCCCCCCCcHHHHHH-HHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHH
Q 014603 45 RPLIPLGHGDPSAFPSFRTASVAVDA-IVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI 123 (422)
Q Consensus 45 ~~~i~l~~g~~~~~~~~~~~~~v~~a-~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~ 123 (422)
.-+|||=+...+ +.+.++ +......+ ..|...+...+|++.+++++ ..+.++++++|+.|+
T Consensus 38 ~v~iDLltDsgT--------~aMs~~q~a~~~~GD--e~yag~~s~~~lE~~va~~~--------G~~~av~v~sGT~Al 99 (450)
T TIGR02618 38 DVYIDLLTDSGT--------NAMSDKQWAGLMMGD--EAYAGSRNFYHLERTVRELY--------GFKYVVPTHQGRGAE 99 (450)
T ss_pred ceEEEcccCCCc--------HHHHHHHHHHhhhcc--hhhcCCCcHHHHHHHHHHHH--------CCCeEEEcCCHHHHH
Confidence 335676554422 566666 55544333 25887788899999999999 446899999999999
Q ss_pred HHHHHHhcCCCCEEEecCCCccchHH-HHhhCCCeEEEeecc--------CCCCcccCHHHHHHhhcC----CceEEEEe
Q 014603 124 EVILTVLARPGANILLPRPGFPYYEA-RATHSHLEVRHFDLL--------PAKGWEVDLDAVEALADE----NTVALVII 190 (422)
Q Consensus 124 ~~~~~~l~~~gd~Vl~~~~~~~~~~~-~~~~~g~~~~~~~~~--------~~~~~~~d~~~l~~~~~~----~~~~i~i~ 190 (422)
+++....++|||.| +.+.|..... .....|..++.++.+ ....+.+|++.+++.+++ +++.+.+.
T Consensus 100 ~ll~~l~l~pGDeV--psn~~f~Tt~ahIe~~Gav~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e 177 (450)
T TIGR02618 100 NLLSQIAIKPGDYV--PGNMYFTTTRYHQEKNGATFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLA 177 (450)
T ss_pred HHHHHhCCCCcCEE--CCceeHHHHHHHHHhCCeEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCcccCceEEE
Confidence 98877778999977 6677744433 356777755555333 123467899999998875 33467778
Q ss_pred CCCCC-cccccCHHHHHHHHHHHHHcCcEEEEcccccccc--c-----CCCCCCCc----cccCCCCCeEEEecCccccC
Q 014603 191 NPGNP-CGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLA--F-----GNTPFVPM----GVFGSIVPVLTLGSISKRWI 258 (422)
Q Consensus 191 ~p~np-tG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~--~-----~~~~~~~~----~~~~~~~~~i~i~s~sK~~~ 258 (422)
+++|. .|..+|.++++++.++|++||+.||.|.++.... + .|....++ ..+.... ..++.|..|.++
T Consensus 178 ~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~a-D~~~~S~~Kd~~ 256 (450)
T TIGR02618 178 VTVNLAGGQPVSMANMREVRELCEAHGIKVFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMSYA-DGCTMSGKKDCL 256 (450)
T ss_pred EecccCCCeeCCHHHHHHHHHHHHHcCCEEEEEccchhhChhhhhcccccccCCCHHHHHHHHhccC-cEEEEeeccCCC
Confidence 88774 5899999999999999999999999999986511 1 01111122 1111011 157889999976
Q ss_pred CC-CceeEEEEeeCCCCcccchhHHHHHHhhhhhc-c-----CcchHHHHHHHHHHhhch-HHHHHHHHHHHHHHHHHHH
Q 014603 259 VP-GWRLGWLVTSDPNGILQDSGIVDSIKSFLNIS-S-----DPATFIQGAVPQILEKTE-EEFFSKITDILRETADICC 330 (422)
Q Consensus 259 ~~-G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~ 330 (422)
.+ | |++++++ +++.++++...-.. + ..+.-.+.++...|++.. +.+..+ .....++|.
T Consensus 257 ~~~G---G~l~~~d-------~~l~~k~r~~~~~~eG~~tyGgla~r~~~ala~gL~e~~~~~y~~~----r~~~a~~La 322 (450)
T TIGR02618 257 VNIG---GFLCMND-------DEMFQSAKELVVVFEGMPSYGGLAGRDMEAMAIGIREAVDYEYIEH----RVKQVRYLG 322 (450)
T ss_pred CCCc---eEEEeCC-------HHHHHHHHHHhhhcCCccccCchhhhhHHHHHHHHHHhhhHHHHHH----HHHHHHHHH
Confidence 66 5 7777665 57888877764221 1 112223344444554422 222222 333466777
Q ss_pred HHhhcCCCCCCCCCCCCceEEEEecCc----ccccCCCCHHHHHHHHHHhcCeEEec-CCCC-CC-----------CCeE
Q 014603 331 DRLKEIPCITCPKKPEGSMFVMVKLNY----SLLEGINSDMEFALKLAKEESVIVLP-GITV-GL-----------KDWL 393 (422)
Q Consensus 331 ~~L~~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~gi~v~~-g~~~-~~-----------~~~i 393 (422)
+.|.+. |+.+ ..|.+|..+++.... -..... ....+..+|-.+.||--.- |+.. +. -..+
T Consensus 323 ~~L~~~-Gvpv-~~p~ggh~V~vda~~~lph~~~~~~-p~~al~~~ly~~~gir~~e~g~~~~~~~~~~~~~~~~~~el~ 399 (450)
T TIGR02618 323 DKLKAA-GVPI-VEPVGGHAVFLDARRFLPHIPQDQF-PAQSLAASIYVETGVRSMERGIVSAGRNNVTGEHHRPKLELV 399 (450)
T ss_pred HHHHHC-CCcc-cCCCCcceEEEEhHHhCCCCChhhC-hHHHHHHHHHHHhCccEEeecceecccCCCCCcccCCcccee
Confidence 777777 8874 478888888876432 111111 3556666666677875432 2221 11 1579
Q ss_pred EEEec---cChHHHHHHHHHHHHHHHH
Q 014603 394 RITFA---VEPSALEDGLGRMKAFYDR 417 (422)
Q Consensus 394 Ris~~---~~~~~l~~~~~~l~~~~~~ 417 (422)
|+++. .+.+.++...++|..+.++
T Consensus 400 rlaiprr~yt~~h~~~v~~~~~~~~~~ 426 (450)
T TIGR02618 400 RLTIPRRVYTYAHMDVVADGIIKLYKH 426 (450)
T ss_pred eeccccccccHhHHHHHHHHHHHHHhh
Confidence 99997 4789999999999887754
No 324
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.84 E-value=6.8e-18 Score=161.52 Aligned_cols=346 Identities=17% Similarity=0.153 Sum_probs=199.2
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHH--HHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVD--AIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT 120 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~--a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~ 120 (422)
+|+.++||..|......+ ..+|.+.+ ++.+++.+-............+....+++.+.+..+ +...+.++|++||+
T Consensus 43 dG~~ylD~~~g~~~~~lG-h~~p~v~~~~ai~~ql~~l~~~~~~~~~~~~~~~~~la~~l~~~~~-p~~~~~v~f~~SGs 120 (443)
T PRK08297 43 TGRRYLDMFTFFASSALG-MNHPALADDPEFRAELGRAALNKPSNSDVYTVEMARFVDTFARVLG-DPELPHLFFVDGGA 120 (443)
T ss_pred CCCEeeecccCHhhhcCC-CCChHHhhHHHHHHHHHHhhhhccccCCcCCHHHHHHHHHHHhhcC-CCCCCEEEEeCchH
Confidence 688999998886553233 45789999 999998652110000000111233334444433221 11346899999999
Q ss_pred HHHHHHHHHhc----------C---C-CCEEEecCCCccchHHHHhhCCC-eEE---Eeec-----c--CCC-----Ccc
Q 014603 121 QAIEVILTVLA----------R---P-GANILLPRPGFPYYEARATHSHL-EVR---HFDL-----L--PAK-----GWE 170 (422)
Q Consensus 121 ~a~~~~~~~l~----------~---~-gd~Vl~~~~~~~~~~~~~~~~g~-~~~---~~~~-----~--~~~-----~~~ 170 (422)
+|++.+++... . + ..+|+....+||+....+..... ... ..+. . +.. ...
T Consensus 121 EAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (443)
T PRK08297 121 LAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLRFPLPGED 200 (443)
T ss_pred HHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccCCCCCCCCCcccc
Confidence 99999988652 1 1 25799999999987655443321 100 0010 0 000 000
Q ss_pred ---c------CHHHHHHhhc--CCceEEEEeCC-CCCccc-ccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCC
Q 014603 171 ---V------DLDAVEALAD--ENTVALVIINP-GNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVP 237 (422)
Q Consensus 171 ---~------d~~~l~~~~~--~~~~~i~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~ 237 (422)
. +++.+++.+. ++..+.++..| +...|. .+|++.+++|.++|++||+++|.||++.++.++|... .
T Consensus 201 ~~~~~~~~~~~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~-a 279 (443)
T PRK08297 201 LEEVEALEAEALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGVGLTGTAW-A 279 (443)
T ss_pred cchhhHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCccchHH-H
Confidence 0 2344455553 24456667777 444565 4788899999999999999999999999887776432 1
Q ss_pred ccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHH------hhhhhccCcchHHHHHHHHHHhhch
Q 014603 238 MGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIK------SFLNISSDPATFIQGAVPQILEKTE 311 (422)
Q Consensus 238 ~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~a~~~~l~~~~ 311 (422)
...++..++++ +++|.++ +|.++..+ ++.+.+. .....+.+.++++++++.+.|+...
T Consensus 280 ~~~~gv~PDiv---~~gK~l~-----~~a~l~~~--------~i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~ 343 (443)
T PRK08297 280 YQQLGVRPDIV---AFGKKTQ-----VCGIMAGR--------RVDEVEDNVFAVSSRINSTWGGNLVDMVRARRILEVIE 343 (443)
T ss_pred HHhcCCCCCEE---Eeccccc-----ccceecch--------HHHHhhhhhccCccccCCCCCccHHHHHHHHHHHHHHH
Confidence 22233333334 3579852 23333321 2222111 1122345678899999998888643
Q ss_pred H-HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCC
Q 014603 312 E-EFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLK 390 (422)
Q Consensus 312 ~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~ 390 (422)
+ ..+++..+.-+..++.+.+..++.|.+... ....|.++.+.++... ....+...+ .++||++.|+. .
T Consensus 344 ~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~-vrg~G~~~~i~~~~~~-----~~~~~~~~l-~~~Gvl~~~~~----~ 412 (443)
T PRK08297 344 EDGLVENAARQGEYLLARLEELAAEFPAVVSN-VRGRGLMCAFDLPTTA-----DRDEVIRRL-WEEGVLVLPCG----E 412 (443)
T ss_pred hcCHHHHHHHHHHHHHHHHHHHHHHCCCccee-eeccceEEEEEecCHH-----HHHHHHHHH-HHCCEEEecCC----C
Confidence 2 223333333333333333333334433201 2234677777775320 133455555 46799998753 3
Q ss_pred CeEEEEec--cChHHHHHHHHHHHHHHHHh
Q 014603 391 DWLRITFA--VEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 391 ~~iRis~~--~~~~~l~~~~~~l~~~~~~~ 418 (422)
+.+|++++ ++++++++++++|.++++++
T Consensus 413 ~~lr~~P~l~~t~~eid~~l~~l~~~l~~~ 442 (443)
T PRK08297 413 RSIRFRPALTVTTEEIDAAIDALRRALPEV 442 (443)
T ss_pred CeEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 56899766 78999999999999998764
No 325
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.84 E-value=1.4e-18 Score=154.53 Aligned_cols=349 Identities=15% Similarity=0.168 Sum_probs=225.3
Q ss_pred cCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCC--CCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCH
Q 014603 42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSA--RFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGC 119 (422)
Q Consensus 42 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~ 119 (422)
.++.++|||..+.....++ +..|++.+++.++.... ..+.|-... ..++.+.+.+.+.+ -.++.|+|+++|
T Consensus 53 ~~g~EyiD~~ssw~~~~~G-hanpev~ral~~q~~k~~hs~~~~~t~e-av~l~~~l~~~~~~-----~~~~rvff~nsG 125 (433)
T KOG1401|consen 53 PDGKEYIDFTSSWAVTILG-HANPEVARALAEQAKKLGHSSNGYFTLE-AVELEEVLSAVLGK-----GSAERVFFCNSG 125 (433)
T ss_pred CCcceeeeeccceeccccC-CCCHHHHHHHHHHHhhheeccCccccHH-HHHHHHHHHhcccC-----CCccEEEEecCC
Confidence 4689999999998665555 45899999999998763 223333322 34556666665543 277899999999
Q ss_pred HHHHHHHHHHhcC------CC--CEEEecCCCccchHHHHhh-CCCeEEEeeccCCC-C----cccCHHHHHHhhcCCc-
Q 014603 120 TQAIEVILTVLAR------PG--ANILLPRPGFPYYEARATH-SHLEVRHFDLLPAK-G----WEVDLDAVEALADENT- 184 (422)
Q Consensus 120 ~~a~~~~~~~l~~------~g--d~Vl~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~-~----~~~d~~~l~~~~~~~~- 184 (422)
|+|++.++....+ +- ..++....+||+-...+.. .+...+..|.+|.- + .--|...+++.++.+.
T Consensus 126 TeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~~ynd~t~l~k~~~~h~~ 205 (433)
T KOG1401|consen 126 TEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTAEYNDSTALEKLFESHKG 205 (433)
T ss_pred cHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCceeecccCCHHHHHHHHHhCCC
Confidence 9999999876432 11 2499999999876444332 23222333322210 0 1126788888886544
Q ss_pred -eEEEEeCC-CCCcccc-cCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCC
Q 014603 185 -VALVIINP-GNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPG 261 (422)
Q Consensus 185 -~~i~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G 261 (422)
.+.+|..| +...|.+ ..++.+..|.++|+++|+++|.||++.++.+.|... ..+.+...++ +.++.|. ...|
T Consensus 206 ~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~~~-a~e~~~~~PD---I~t~aK~-L~gG 280 (433)
T KOG1401|consen 206 EIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYGW-AQEYFGVTPD---ITTVAKP-LGGG 280 (433)
T ss_pred ceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccchHH-HHHHhCcCCc---ceeehhh-ccCC
Confidence 56667777 5566664 577889999999999999999999999987776431 2222333333 4455799 4678
Q ss_pred ceeEEEEeeCCCCcccchhHHHHHHhhh----hhccCcchHHHHHHHHHHhhch-HHHHHHHHHHHHHHHHHHHHHhhcC
Q 014603 262 WRLGWLVTSDPNGILQDSGIVDSIKSFL----NISSDPATFIQGAVPQILEKTE-EEFFSKITDILRETADICCDRLKEI 336 (422)
Q Consensus 262 ~r~G~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~ 336 (422)
+++|+.++++ ++.+.+.... ..+++.+++.+.++...|+... .++++++.+.-+..++.+.+.+.+-
T Consensus 281 lPigA~~v~~--------kV~~~i~~~~~l~hg~Tf~gnpLacsa~~~~l~~l~~~e~~k~vs~~~k~L~~~l~e~~~~~ 352 (433)
T KOG1401|consen 281 LPIGATGVRD--------KVAEMISPGDHLYHGGTFSGNPLACSAGIKVLDELKDPETLKNVSKIGKELRKLLDEYLKKT 352 (433)
T ss_pred ceeEEEeehH--------HHHhhcCCCCccccCcccCCChhhhhHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 9999999863 6777775433 3456888999999999998744 6778888888888899999888876
Q ss_pred CCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEe------ccChHHHHHHHHH
Q 014603 337 PCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITF------AVEPSALEDGLGR 410 (422)
Q Consensus 337 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~------~~~~~~l~~~~~~ 410 (422)
+...+- ....++++.+.+..+..+.. +.. .+.+.++.++........+|+.+ .+++|.+++++++
T Consensus 353 ~~~i~g-~~grgl~ig~~~~~p~~~~~-d~~-------~~~~ll~~~~~~~~~~~gv~i~P~~~l~~~~~~E~i~~~l~i 423 (433)
T KOG1401|consen 353 PNSICG-GVGRGLVIGFEFEGPVYKFA-DAA-------REQGLLILTLGKGLLEEGVRIAPIYLLTVEHTPEVIQRLLTI 423 (433)
T ss_pred CCceee-eeeeEEEEEEEEeechhhhh-hhh-------hhhhHHHHHHhcccccceEEEeccccccccCcHHHHHHHHHH
Confidence 443312 24446666655543211111 111 11122222211111123344443 2458999999999
Q ss_pred HHHHHHHhc
Q 014603 411 MKAFYDRHA 419 (422)
Q Consensus 411 l~~~~~~~~ 419 (422)
+.+.+.++.
T Consensus 424 ~~~~l~~~~ 432 (433)
T KOG1401|consen 424 LEKVLSALN 432 (433)
T ss_pred HHHHHHHhc
Confidence 999988764
No 326
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.84 E-value=4.2e-18 Score=160.40 Aligned_cols=285 Identities=13% Similarity=0.149 Sum_probs=187.2
Q ss_pred CCEEEecCHH-HHHHHHHHHhcC---CCCEEEecCCCccchHHHHhhCCCeEEEeec-cCCCCcccCHHHHHHhhcC---
Q 014603 111 DDVYLTLGCT-QAIEVILTVLAR---PGANILLPRPGFPYYEARATHSHLEVRHFDL-LPAKGWEVDLDAVEALADE--- 182 (422)
Q Consensus 111 ~~i~~~~g~~-~a~~~~~~~l~~---~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~d~~~l~~~~~~--- 182 (422)
+..++++|+| .++.+++.++.. +||.|+++...|.+....+...|++++.++. .+++.+.+|++.|++++++
T Consensus 124 ~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~kAi~~~G~~pv~Vd~~~d~~~~~iD~e~Le~aIt~~~~ 203 (444)
T TIGR03531 124 KSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKAISTAGFEPRVIETVLDGDELTTDVEDIERAIEEIGP 203 (444)
T ss_pred CEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHHHHHHcCCeEEEeeeeecCcCCCcCHHHHHHHHHhccC
Confidence 4688899999 588877777652 5899999999999999999999999999985 2345688999999999875
Q ss_pred CceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCc--cccCCCCC-eEEEecCccccCC
Q 014603 183 NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPM--GVFGSIVP-VLTLGSISKRWIV 259 (422)
Q Consensus 183 ~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~--~~~~~~~~-~i~i~s~sK~~~~ 259 (422)
+.+++++.+|+ ++.....+++++|.++|++||+++|+|++|+..... ...+ ..... ++ .+++.|++|.+.+
T Consensus 204 kai~~Vv~Tp~--t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~~---~~~~~~~g~~~-Grad~vv~s~hK~l~~ 277 (444)
T TIGR03531 204 DNILCVLSTTS--CFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSNK---YMELINKAIKV-GRVDAVVSSTDKNFMV 277 (444)
T ss_pred CCEEEEEEcCC--cCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcChh---hhhhhhccccc-cCCCeEEEeCccCCCC
Confidence 45666666665 333334489999999999999999999999852211 0011 11110 11 3668899999887
Q ss_pred CCceeEEEEeeCCCCcccchhHHHHHHhhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCC--
Q 014603 260 PGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIP-- 337 (422)
Q Consensus 260 ~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-- 337 (422)
+|. .|.+++++ +++.+++...... ...+...+.+...++.. ..+++++..++..++++.+.+.|+++.
T Consensus 278 pg~-Gg~I~~~d-------~el~~~i~~~y~g-~~~~s~~~~~~~~ll~~-G~~g~~~li~~~~~~a~~l~~~L~~l~~~ 347 (444)
T TIGR03531 278 PVG-GAIIYSFD-------ENFIQEISKSYPG-RASASPSLDVLITLLSL-GSKGYLELLKERKEMYKYLKELLQKLAER 347 (444)
T ss_pred CCC-EEEEEECC-------HHHHHHHHHhccC-CCCChHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 775 34444544 5677776654321 22334566666656643 457888889999999999999888652
Q ss_pred -CCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCe----EEecCC-------CC---CC------CCeEEEE
Q 014603 338 -CITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESV----IVLPGI-------TV---GL------KDWLRIT 396 (422)
Q Consensus 338 -~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi----~v~~g~-------~~---~~------~~~iRis 396 (422)
+..+...|.+...+-+.+.... ..+...+-.. |-..+| .|.||. .| +. ..++-++
T Consensus 348 ~~~~~~~~~~n~is~~~~~~~~~---~~~~~~~g~~-l~~~~v~g~r~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~ 423 (444)
T TIGR03531 348 HGERLLDTPENPISSAMTLSTLK---GKDPTMLGSM-LYSRRVTGPRVVTNGDSKTVGGCEFKGYGSHTSNYPCPYITAA 423 (444)
T ss_pred hCcEeecCCCCceeEEEeccccc---ccCHHHHHHH-HHhCCCCCceeecCCCceEECCEEeecccccccCCCchhHHHH
Confidence 3343445565555555554221 0133444333 333455 244555 12 11 1233333
Q ss_pred e--ccChHHHHHHHHHHHHHH
Q 014603 397 F--AVEPSALEDGLGRMKAFY 415 (422)
Q Consensus 397 ~--~~~~~~l~~~~~~l~~~~ 415 (422)
. +++++|++.++++|++++
T Consensus 424 ~~~g~~~~~~~~~~~~l~~~~ 444 (444)
T TIGR03531 424 AAIGMTKEDVDTFVSRLEKSL 444 (444)
T ss_pred HHhCCcHHHHHHHHHHHhhcC
Confidence 3 378999999999998753
No 327
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.84 E-value=9.4e-18 Score=161.10 Aligned_cols=346 Identities=13% Similarity=0.060 Sum_probs=205.6
Q ss_pred CCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCC------CCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEE---
Q 014603 45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCY------SSTVGILPARRAIADYLNRDLPYKLSPDDVYL--- 115 (422)
Q Consensus 45 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y------~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~--- 115 (422)
...|+|--.. | ..++.+++++...+.+....+| +-...+.++++...+...+.++ ...+.+.+
T Consensus 34 ~~~l~liase-----n-~~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~~~~~~~f~--~~~~~~~~nv~ 105 (475)
T PLN03226 34 WKGLELIASE-----N-FTSRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQKRALEAFR--LDPEKWGVNVQ 105 (475)
T ss_pred HcCeeEecCC-----c-cCCHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHHHHHHHHhC--CCcceeEEecC
Confidence 5557764433 2 3568899999888844222222 2223455666533333333332 23333333
Q ss_pred ecCHHHHHHHHHHHhcCCCCEEEecCC---Cccch---HHHHhhCCCeEE----EeeccCCCCcccCHHHHHHhhcC-Cc
Q 014603 116 TLGCTQAIEVILTVLARPGANILLPRP---GFPYY---EARATHSHLEVR----HFDLLPAKGWEVDLDAVEALADE-NT 184 (422)
Q Consensus 116 ~~g~~~a~~~~~~~l~~~gd~Vl~~~~---~~~~~---~~~~~~~g~~~~----~~~~~~~~~~~~d~~~l~~~~~~-~~ 184 (422)
..+|+.|+..++.++++|||+|+..+. +|... ....+..+.... .+.+++ +++.+|+++|++.+.+ ++
T Consensus 106 ~~SG~~AN~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~~-~~g~iD~d~Le~~l~~~~p 184 (475)
T PLN03226 106 PLSGSPANFAVYTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDE-STGLIDYDKLEKKAMLFRP 184 (475)
T ss_pred cCchHHHHHHHHHHhCCCCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeeecC-CCCCcCHHHHHHHHhhcCC
Confidence 378899999999999999999998553 33221 111111222221 334443 3457899999998764 56
Q ss_pred eEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCC-CCccccCCCCCeEEEecCcccc-CCCCc
Q 014603 185 VALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPF-VPMGVFGSIVPVLTLGSISKRW-IVPGW 262 (422)
Q Consensus 185 ~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~-~~~~~~~~~~~~i~i~s~sK~~-~~~G~ 262 (422)
+.++ +..++ +|.. .++++|.++|+++|+++++|++|.......... .++. .. .++++|++|++ |..|
T Consensus 185 klIv-~~~S~-~s~~---~D~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~p~~--~~---Div~~t~hK~L~GP~G- 253 (475)
T PLN03226 185 KLII-AGASA-YPRD---WDYARMRKIADKVGALLMCDMAHISGLVAAQEAASPFE--YC---DVVTTTTHKSLRGPRG- 253 (475)
T ss_pred eEEE-EecCc-CCCc---cCHHHHHHHHHHcCCEEEEEchhhhCcccCCCCCCCCC--CC---eEEEecCcccccCCCc-
Confidence 6554 43333 5665 467788899999999999999998644322211 1221 12 28889999997 3344
Q ss_pred eeEEEEeeCCCCcc------cchhHHHHHHhhh--hhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhh
Q 014603 263 RLGWLVTSDPNGIL------QDSGIVDSIKSFL--NISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLK 334 (422)
Q Consensus 263 r~G~~~~~~~~~~~------~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~ 334 (422)
|++++++..... ...++...+.... .+.+++++...+++..+++.......++..+++.++.+.+.+.|+
T Consensus 254 --g~I~~~~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~~na~~L~~~L~ 331 (475)
T PLN03226 254 --GMIFFRKGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKAYQKQVKANAAALANRLM 331 (475)
T ss_pred --eEEEEchhhcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHH
Confidence 888875311000 0001221222111 133456666666777777764444567778999999999999999
Q ss_pred cCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCC-----CCCeEEEEec------cChHH
Q 014603 335 EIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVG-----LKDWLRITFA------VEPSA 403 (422)
Q Consensus 335 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~-----~~~~iRis~~------~~~~~ 403 (422)
+. |+.++.........++.+... + .+..+. ...+++.||.+..+.-++ ....+|++.. .++++
T Consensus 332 ~~-G~~l~~~~t~~hi~lv~~~~~---g-i~~~~~-~~~L~~~~I~~nk~~~p~~~~~~~~~giRiGt~~lt~~g~~~~d 405 (475)
T PLN03226 332 SK-GYKLVTGGTDNHLVLWDLRPL---G-LTGSRV-EKVLDLAHITLNKNAVPGDSSALVPGGVRIGTPAMTSRGLVEKD 405 (475)
T ss_pred hC-CCEEEcCCCCCCEEEEEccCC---C-CCHHHH-HHHHHHCCCEECCCCCCCCcccCCCCCcccCcHHHHHCCCCHHH
Confidence 85 777442222244566666321 1 134444 445577899998765222 1466898653 56789
Q ss_pred HHHHHHHHHHHHHHh
Q 014603 404 LEDGLGRMKAFYDRH 418 (422)
Q Consensus 404 l~~~~~~l~~~~~~~ 418 (422)
++++.+.|.++++.+
T Consensus 406 ~~~ia~~i~~~~~~~ 420 (475)
T PLN03226 406 FEKVAEFLHRAVTIA 420 (475)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999998743
No 328
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.83 E-value=2.2e-17 Score=138.66 Aligned_cols=323 Identities=13% Similarity=0.134 Sum_probs=214.8
Q ss_pred CCcHHHHHHHHHHhhCCCCCCCC--------CCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCC
Q 014603 62 RTASVAVDAIVHSVRSARFNCYS--------STVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARP 133 (422)
Q Consensus 62 ~~~~~v~~a~~~~~~~~~~~~y~--------~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~ 133 (422)
-.+++.++|+.+.-+..+...|- ..+.+.++.+.+++|+ .-|.+-+|.|+.++-++++.+++++
T Consensus 28 iLt~eArkal~E~gDGYSvCD~C~~Grldei~kPpI~~F~~dlaeFl--------g~D~~R~t~GARe~KfavMhal~~~ 99 (382)
T COG1103 28 ILTEEARKALLEWGDGYSVCDFCLEGRLDEITKPPIKDFLEDLAEFL--------GMDEVRVTAGAREAKFAVMHALCKE 99 (382)
T ss_pred cCCHHHHHHHHHhcCCcchhhhhccCccccccCCcHHHHHHHHHHHh--------CCceeeecccchhhHHHHHHHhccC
Confidence 34678888888876542221111 1123567778899999 4578899999999999999999999
Q ss_pred CCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhh----cC---CceEEEEeCCCCCcccccCHHHHH
Q 014603 134 GANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALA----DE---NTVALVIINPGNPCGNVYTYQHLQ 206 (422)
Q Consensus 134 gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~----~~---~~~~i~i~~p~nptG~~~~~~~l~ 206 (422)
||.|++...+|+....+++..|.++..+|......+.+++|...+.+ ++ .+.+++++++....|.. .|.+
T Consensus 100 gd~vV~D~~aHYttyvAAEragl~v~eVp~tg~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl---~Dak 176 (382)
T COG1103 100 GDWVVVDSLAHYTTYVAAERAGLNVAEVPNTGYPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNL---ADAK 176 (382)
T ss_pred CCEEEEcCcchHHHHHHHHhcCCeEEecCCCCCCceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCc---hhhH
Confidence 99999999999998999999999999999665566888888765544 22 35677899998888888 7899
Q ss_pred HHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHH
Q 014603 207 KIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIK 286 (422)
Q Consensus 207 ~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~ 286 (422)
+++++|+++|+.++...+|.. |..+.+...++.| ++++|-+|++ .+.-++|.+.++ .++.+..-
T Consensus 177 kva~ic~e~gvPlllN~AYt~----Grmpvs~ke~g~D---FiVgSGHKsm-AAs~PiGvl~~~--------eE~ae~V~ 240 (382)
T COG1103 177 KVAKICREYGVPLLLNCAYTV----GRMPVSGKEIGAD---FIVGSGHKSM-AASAPIGVLAMS--------EEWAEIVL 240 (382)
T ss_pred HHHHHHHHcCCceEeecceee----ccccccccccCCC---EEEecCccch-hccCCeeEEeeh--------hHHHHHHH
Confidence 999999999999999999987 5556666677766 9999999995 555679999885 35555443
Q ss_pred hhhh---------hccCcc-hHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC-CCCCCceEEEEec
Q 014603 287 SFLN---------ISSDPA-TFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCP-KKPEGSMFVMVKL 355 (422)
Q Consensus 287 ~~~~---------~~~~~~-~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~g~~~~~~~ 355 (422)
+... ..++.+ ......+.+.+-. -.+.+.++.+. -+..+.+.+.|+++.|+... ..|..--.+.+..
T Consensus 241 r~Sg~~~~~KEvellGCT~rGapivTlmASfP~-V~eRVkrWdeE-v~kaR~fv~elEkigg~~qlG~rPk~HdLm~Fet 318 (382)
T COG1103 241 RRSGRAFPKKEVELLGCTVRGAPIVTLMASFPH-VVERVKRWDEE-VEKARWFVAELEKIGGVKQLGERPKNHDLMKFET 318 (382)
T ss_pred hhcccccccceeeeecccccCchHHHHHhcCHH-HHHHHHHHHHH-HHHHHHHHHHHHHhhhHHHhCCCCcccceeeecC
Confidence 3221 111111 1111111111111 01222222222 34566778888888666522 2344333333333
Q ss_pred Cccc--c-cCCCCHHHHHHHHHHhcCeE-EecCCCCCCCCeEEEEec-cChHHHHHHHHHHHHHHHHh
Q 014603 356 NYSL--L-EGINSDMEFALKLAKEESVI-VLPGITVGLKDWLRITFA-VEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 356 ~~~~--~-~~~~~~~~~~~~l~~~~gi~-v~~g~~~~~~~~iRis~~-~~~~~l~~~~~~l~~~~~~~ 418 (422)
|... . +......-+.++| +++||. |.|| ...++.+|.- .+.|+++..+++++++++++
T Consensus 319 p~f~eIakk~~r~gyFlY~EL-K~RgI~GI~~G----~Tk~~K~svyGl~~Eqve~V~~afkeI~eky 381 (382)
T COG1103 319 PVFHEIAKKHKRKGYFLYEEL-KKRGIHGIQPG----QTKYFKLSVYGLSWEQVEYVVDAFKEIAEKY 381 (382)
T ss_pred chHHHHHHhCcCCceeeHHHH-HhcCccccccC----ceeEEEEEeecCCHHHHHHHHHHHHHHHHhc
Confidence 3210 0 0000111233444 555665 4444 3578999975 89999999999999999876
No 329
>PLN02590 probable tyrosine decarboxylase
Probab=99.83 E-value=6.2e-17 Score=156.18 Aligned_cols=340 Identities=11% Similarity=0.059 Sum_probs=215.8
Q ss_pred HHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCC-----CCCEEEecCHHHHHHHHHHHhcC--------
Q 014603 66 VAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLS-----PDDVYLTLGCTQAIEVILTVLAR-------- 132 (422)
Q Consensus 66 ~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~-----~~~i~~~~g~~~a~~~~~~~l~~-------- 132 (422)
-+-+.+...+.. ....|...+...++++.+.+|+.+.+|.+-. ...=++++|+|+|+..++.+...
T Consensus 146 ~lgd~l~sa~n~-~~~~~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~ 224 (539)
T PLN02590 146 FLGEMLNAGLSV-VGFTWLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGK 224 (539)
T ss_pred HHHHHHHHhccc-ccCCcccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcc
Confidence 334444444433 2234555566789999999999998875532 13456788999888776654321
Q ss_pred ---CCCEEEecCCCccchHHHHhhCCC---eEEEeeccCCCCcccCHHHHHHhhcCC------ceEEEEeCCCCCccccc
Q 014603 133 ---PGANILLPRPGFPYYEARATHSHL---EVRHFDLLPAKGWEVDLDAVEALADEN------TVALVIINPGNPCGNVY 200 (422)
Q Consensus 133 ---~gd~Vl~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~i~i~~p~nptG~~~ 200 (422)
+.-.|++.+..|+++..++...|+ .++.+|.+..+++.+|++.|++.+.+. +-+|+.+-.+..+|.+
T Consensus 225 ~~~~~~vvy~S~~aH~Sv~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGai- 303 (539)
T PLN02590 225 TLLPQLVVYGSDQTHSSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAV- 303 (539)
T ss_pred cCCCCEEEEecCCchHHHHHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCccc-
Confidence 112566678899999999999998 478888765456789999999988542 3445555668889999
Q ss_pred CHHHHHHHHHHHHHcCcEEEEcccccccccC-CCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccch
Q 014603 201 TYQHLQKIAETAKKLGIMVIADEVYDHLAFG-NTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDS 279 (422)
Q Consensus 201 ~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~-~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~ 279 (422)
+++++|.++|++||+++++|.+|++...- .....-+..++..+ -+..+++|+ +.....+|.++++++.
T Consensus 304 --Dpl~~Ia~i~~~~g~WlHVDaA~GG~al~~~~~r~~~~Gie~AD--Sit~D~HK~-l~~p~~cg~llvr~~~------ 372 (539)
T PLN02590 304 --DPLVPLGNIAKKYGIWLHVDAAYAGNACICPEYRKFIDGIENAD--SFNMNAHKW-LFANQTCSPLWVKDRY------ 372 (539)
T ss_pred --CCHHHHHHHHHHhCCeEEEecchhhhhhcChhhHHHhcCCccCC--EEEECchhh-cCcCcCEEEEEecCHH------
Confidence 88999999999999999999999875421 11111112222111 455689999 5666779999987642
Q ss_pred hHHHHHHh---hh--------------hhccCc-chHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCC
Q 014603 280 GIVDSIKS---FL--------------NISSDP-ATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITC 341 (422)
Q Consensus 280 ~~~~~~~~---~~--------------~~~~~~-~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 341 (422)
.+...+.. +. ..+... -.+....+-..|+....+.+.+..++.-++.+++.+.|++.|++++
T Consensus 373 ~l~~a~~~~~~YL~~~~~~~~~~~d~~d~~i~lsRr~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel 452 (539)
T PLN02590 373 SLIDALKTNPEYLEFKVSKKDTVVNYKDWQISLSRRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEV 452 (539)
T ss_pred HHHHHhhcCHHHhCCcccccccCCCccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Confidence 12222211 00 000011 1122222223344444678889999999999999999999999986
Q ss_pred CCCCCCceEEEEecCcccccC---CCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec---cChHHHHHHHHHHHHHH
Q 014603 342 PKKPEGSMFVMVKLNYSLLEG---INSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA---VEPSALEDGLGRMKAFY 415 (422)
Q Consensus 342 ~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~---~~~~~l~~~~~~l~~~~ 415 (422)
+..|.-+. +.+++....... ..-..++.+++.+...+++.+ ......-++|++++ +++++++.+++.|.+..
T Consensus 453 ~~~~~l~i-VcFr~~~~~~~~~~~~~ln~~l~~~l~~~G~~~vs~-t~~~g~~~lR~~i~n~~T~~~dv~~~~~~i~~~a 530 (539)
T PLN02590 453 VTTRYFSL-VCFRLAPVDGDEDQCNERNRELLAAVNSTGKIFISH-TALSGKFVLRFAVGAPLTEEKHVTEAWQIIQKHA 530 (539)
T ss_pred ecCCceEE-EEEEecCCCCCHHHHHHHHHHHHHHHHhCCCEEEEe-eEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Confidence 65555443 334443211000 001234455554444444544 33333568999997 67899999999999988
Q ss_pred HHhcc
Q 014603 416 DRHAK 420 (422)
Q Consensus 416 ~~~~~ 420 (422)
+++.+
T Consensus 531 ~~~~~ 535 (539)
T PLN02590 531 SKFTR 535 (539)
T ss_pred HHhcc
Confidence 77644
No 330
>PLN02880 tyrosine decarboxylase
Probab=99.83 E-value=3.1e-17 Score=158.29 Aligned_cols=339 Identities=10% Similarity=0.014 Sum_probs=212.7
Q ss_pred HHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCC-----CCCEEEecCHHHHHHHHHHHhcC--------
Q 014603 66 VAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLS-----PDDVYLTLGCTQAIEVILTVLAR-------- 132 (422)
Q Consensus 66 ~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~-----~~~i~~~~g~~~a~~~~~~~l~~-------- 132 (422)
.+-+.+...++. ....|...+...++++.+.+|+.+.+|.+-. ...-++|+|||+|+..++.+...
T Consensus 98 ~lad~l~~~~n~-~~~~~~~sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~ 176 (490)
T PLN02880 98 FLGEMLSAGLNI-VGFSWITSPAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGK 176 (490)
T ss_pred HHHHHHHHhhcc-CCcccccCcccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcc
Confidence 334444444433 2224444456789999999999987775532 12467789999988776654321
Q ss_pred ---CCCEEEecCCCccchHHHHhhCCCe---EEEeeccCCCCcccCHHHHHHhhcCC------ceEEEEeCCCCCccccc
Q 014603 133 ---PGANILLPRPGFPYYEARATHSHLE---VRHFDLLPAKGWEVDLDAVEALADEN------TVALVIINPGNPCGNVY 200 (422)
Q Consensus 133 ---~gd~Vl~~~~~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~i~i~~p~nptG~~~ 200 (422)
+.-.|++++..|+++..++...|++ ++.+|.+..+++.+|++.|++.+.+. +-+++.+-.+..+|.+
T Consensus 177 ~~~~~~vv~~S~~aH~Sv~Kaa~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~Gai- 255 (490)
T PLN02880 177 NALEKLVVYASDQTHSALQKACQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAV- 255 (490)
T ss_pred cccCCeEEEEcCCchHHHHHHHHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCccc-
Confidence 1125667888999999999999985 67888765556789999999887531 3445555668899999
Q ss_pred CHHHHHHHHHHHHHcCcEEEEcccccccccC-CCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccch
Q 014603 201 TYQHLQKIAETAKKLGIMVIADEVYDHLAFG-NTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDS 279 (422)
Q Consensus 201 ~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~-~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~ 279 (422)
+++++|+++|+++|+++++|.+|++...- ......+..+... ..+..+++|++ .....+|+++++++.
T Consensus 256 --Dpl~eI~~i~~~~~iwlHVDaA~gg~~~~~~~~~~~l~gie~a--DSit~d~HKwl-~~P~~~g~llvr~~~------ 324 (490)
T PLN02880 256 --DPLLELGKIAKSNGMWFHVDAAYAGSACICPEYRHYIDGVEEA--DSFNMNAHKWF-LTNFDCSLLWVKDRN------ 324 (490)
T ss_pred --CcHHHHHHHHHHcCCEEEEehhhHHHHHhCHHHHHHhcCchhc--CEEEECchhhc-CCCccEEEEEEeCHH------
Confidence 78999999999999999999999875321 1100012222111 26677999994 666779999987521
Q ss_pred hHHHHHHhhhhh-c-------c----------CcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCC
Q 014603 280 GIVDSIKSFLNI-S-------S----------DPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITC 341 (422)
Q Consensus 280 ~~~~~~~~~~~~-~-------~----------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 341 (422)
.+...+.....+ . . ....+....+-..|+....+.+.++.++..++++++.+.|++.+++++
T Consensus 325 ~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~~i~~~rr~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el 404 (490)
T PLN02880 325 ALIQSLSTNPEFLKNKASQANSVVDYKDWQIPLGRRFRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEV 404 (490)
T ss_pred HHHHHHccCHHHhcCccccccCCCChhccCcCCCCcccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 222222111110 0 0 000011111111244334566777777777999999999999888886
Q ss_pred CCCCCCceEEEEecCcccccCC---CCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec---cChHHHHHHHHHHHHHH
Q 014603 342 PKKPEGSMFVMVKLNYSLLEGI---NSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA---VEPSALEDGLGRMKAFY 415 (422)
Q Consensus 342 ~~~~~~g~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~---~~~~~l~~~~~~l~~~~ 415 (422)
+..|..+ .+.++++....... .-..++.+++.++..+.+.+.. +....++|+++. +++++++.+++.|.+..
T Consensus 405 ~~~~~~~-iv~Fr~~~~~~~~~~~~~~n~~l~~~l~~~g~~~v~~t~-~~g~~~lR~~~~n~~tt~~di~~~~~~i~~~~ 482 (490)
T PLN02880 405 VTPRIFS-LVCFRLVPPKNNEDNGNKLNHDLLDAVNSSGKIFISHTV-LSGKYVLRFAVGAPLTEERHVTAAWKVLQDEA 482 (490)
T ss_pred ecCCceE-EEEEEEeCCCCChhhHHHHHHHHHHHHHhCCCEEEEEEE-ECCEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Confidence 6445544 44455542110000 0013455555555666665533 333678999997 56799999999999988
Q ss_pred HHhc
Q 014603 416 DRHA 419 (422)
Q Consensus 416 ~~~~ 419 (422)
+++.
T Consensus 483 ~~~~ 486 (490)
T PLN02880 483 SKLL 486 (490)
T ss_pred HHHH
Confidence 7764
No 331
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.82 E-value=2.3e-17 Score=157.76 Aligned_cols=344 Identities=16% Similarity=0.141 Sum_probs=195.9
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHH--HHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAV--DAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT 120 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~--~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~ 120 (422)
+|+.+|||..|......+ ..+|.+. +++.+++.+.............+....+++.|.+..+ +-..+.++++++|+
T Consensus 36 dG~~ylD~~~g~~~~~lG-h~~p~v~~~~ai~~q~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~v~f~~sGs 113 (431)
T TIGR03251 36 DGRRYLDMFSFFASMALG-MNHPALVDDLAFRARLGAAAVNKPSNSDVYTVAMARFVDTFARVLG-DPALPHLFFIEGGA 113 (431)
T ss_pred CCCChhhcccChhhcCCC-CCChhhhHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHHHHHhcC-CCCcCEEEEeCCcH
Confidence 689999998887554333 4578888 8999988753211111111112222334433333211 11346899999999
Q ss_pred HHHHHHHHHhc----------C----CCCEEEecCCCccchHHHHhhC-CCe-EE--Eeec-------cCCC--Cc----
Q 014603 121 QAIEVILTVLA----------R----PGANILLPRPGFPYYEARATHS-HLE-VR--HFDL-------LPAK--GW---- 169 (422)
Q Consensus 121 ~a~~~~~~~l~----------~----~gd~Vl~~~~~~~~~~~~~~~~-g~~-~~--~~~~-------~~~~--~~---- 169 (422)
+|++.+++... . .+.+|+....+||+....+... +.. .. ..+. .+.. ++
T Consensus 114 EAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 193 (431)
T TIGR03251 114 LAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLTFPLDAPN 193 (431)
T ss_pred HHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCCCCcccCCccccc
Confidence 99999987652 1 1368999999999875544432 211 00 0110 0000 00
Q ss_pred -c-------cCHHHHHHhhc--CCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCC
Q 014603 170 -E-------VDLDAVEALAD--ENTVALVIINP-GNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVP 237 (422)
Q Consensus 170 -~-------~d~~~l~~~~~--~~~~~i~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~ 237 (422)
. -+++.+++.+. .+..+.++..| +...|.. +|++.+++|.++|++||+++|+||+++++.++|... .
T Consensus 194 ~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~-a 272 (431)
T TIGR03251 194 LDQVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGVGLTGTAW-A 272 (431)
T ss_pred cchhhHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhccCccchHH-H
Confidence 0 12334444553 23455556666 5556754 678899999999999999999999999887766432 2
Q ss_pred ccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHH-HH--hhhhhccCcchHHHHHHHHHHhhchH-H
Q 014603 238 MGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDS-IK--SFLNISSDPATFIQGAVPQILEKTEE-E 313 (422)
Q Consensus 238 ~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~a~~~~l~~~~~-~ 313 (422)
...++..+++++ ++|.+ +. .|++.... + .++... +. .....+.+.++++.+++.++|+...+ .
T Consensus 273 ~~~~gv~PDi~~---~gK~~--~~--~g~~~~~~---i---~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~ 339 (431)
T TIGR03251 273 YQQLGVQPDIVA---FGKKT--QV--CGIMAGRR---V---DEVADNVFAVPSRLNSTWGGNLVDMVRATRILEIIEEER 339 (431)
T ss_pred HHhcCCCCCEEE---ecccC--cc--ceEEecch---H---HHhhhhcccCccccCCCCCCCHHHHHHHHHHHHHHHhcC
Confidence 222333333343 57874 22 25554321 0 011111 11 01223446788889998888886433 2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeE
Q 014603 314 FFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWL 393 (422)
Q Consensus 314 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~i 393 (422)
.+++..+.-+..++.+.+..++.+++... ....|.++.+.++... ....+...+ .++||++.|.. .+.+
T Consensus 340 l~~~~~~~g~~l~~~L~~l~~~~~~~i~~-vrg~G~~~~i~~~~~~-----~~~~~~~~l-~~~Gvl~~~~g----~~~l 408 (431)
T TIGR03251 340 LVDNARVQGAHLLARLHELAAEFPHLVSN-PRGRGLMCAFDLPSTA-----DRDEVIRQL-YREGVLLLGCG----ERSI 408 (431)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCccceec-ccccceeEEEEeCCHH-----HHHHHHHHH-HhCCeEEecCC----CCeE
Confidence 23444444444444554433445423212 2233667777775320 123455555 56799998743 3568
Q ss_pred EEEec--cChHHHHHHHHHHHH
Q 014603 394 RITFA--VEPSALEDGLGRMKA 413 (422)
Q Consensus 394 Ris~~--~~~~~l~~~~~~l~~ 413 (422)
|++++ ++++++++++++|.+
T Consensus 409 r~~P~l~~t~~eid~~l~~l~~ 430 (431)
T TIGR03251 409 RFRPPLTVTREEIDAAIDAIRR 430 (431)
T ss_pred EEECCccCCHHHHHHHHHHHHh
Confidence 98887 789999999999876
No 332
>PLN03032 serine decarboxylase; Provisional
Probab=99.82 E-value=8.2e-17 Score=149.33 Aligned_cols=307 Identities=17% Similarity=0.081 Sum_probs=198.5
Q ss_pred HHHHHHHHHhhCCCCCCCCC---CCCCHHHHHHHHHHHhhcCCCCCCCCCE--EEecCHHHHHHHHHHHhc--CCCCEEE
Q 014603 66 VAVDAIVHSVRSARFNCYSS---TVGILPARRAIADYLNRDLPYKLSPDDV--YLTLGCTQAIEVILTVLA--RPGANIL 138 (422)
Q Consensus 66 ~v~~a~~~~~~~~~~~~y~~---~~g~~~lr~~ia~~l~~~~~~~~~~~~i--~~~~g~~~a~~~~~~~l~--~~gd~Vl 138 (422)
...+++.+...+...+.+.. .....++++.+.+++.+.+| .+++++ +||+|||+|+..++.+.. .++..|+
T Consensus 38 ~~~~~~~~~~~~~~gnP~s~~~~g~~a~~~e~~v~~~ia~llg--~~~~~~~G~fTsGGTEaNl~al~~ar~~~~~~~vi 115 (374)
T PLN03032 38 GELSQLMKYSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWE--LEKDEYWGYITTCGTEGNLHGILVGREVFPDGILY 115 (374)
T ss_pred HHHHHHHHhcccCCCCCcccCCCCccHHHHHHHHHHHHHHHhC--CCCccCCEEEeCchHHHHHHHHHHHHHhCCCcEEE
Confidence 45677777665422221111 11234555555555554443 456666 999999999998887653 2456899
Q ss_pred ecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC---CceEEEEeCCCCCcccccCHHHHHHHHHHHHHc
Q 014603 139 LPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE---NTVALVIINPGNPCGNVYTYQHLQKIAETAKKL 215 (422)
Q Consensus 139 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~---~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~ 215 (422)
++.-.|++....++.++.+++.+|.++ ++.+|++.|++.+++ ++.+++++..+|++|.+ +++++|+++|+++
T Consensus 116 ~s~~~H~Sv~kaa~~lg~~~~~V~~d~--~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~i---dpi~eI~~i~~~~ 190 (374)
T PLN03032 116 ASRESHYSVFKAARMYRMEAVKVPTLP--SGEIDYDDLERALAKNRDKPAILNVNIGTTVKGAV---DDLDRILRILKEL 190 (374)
T ss_pred eCCCceeHHHHHHHHcCCCCeEeeeCC--CCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccC---CCHHHHHHHHHHh
Confidence 999999999999999999988888754 456999999999876 46677788889999999 7788899999999
Q ss_pred C-----cEEEEccccccccc--CCC-CCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHh
Q 014603 216 G-----IMVIADEVYDHLAF--GNT-PFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKS 287 (422)
Q Consensus 216 ~-----~~li~D~~~~~~~~--~~~-~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~ 287 (422)
| +++++|.++++... ... +..++. ... ..+..|.+|.++ ....+|+++.++ +..+.+..
T Consensus 191 g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~~~-~~v---DSis~s~HK~~g-~P~g~G~ll~r~--------~~~~~~~~ 257 (374)
T PLN03032 191 GYTEDRFYIHCDGALFGLMMPFVSRAPEVTFR-KPI---GSVSVSGHKFLG-CPMPCGVALTRK--------KHVKALSQ 257 (374)
T ss_pred CCCCCCeeEEEEccchhhhhhccCCCcccCCC-cCC---cEEEECcccccC-CCcCeEEEEEEc--------hhhHhhcc
Confidence 6 58999999976321 110 011111 111 256679999954 234589998874 23333321
Q ss_pred hhh--------hccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCccc
Q 014603 288 FLN--------ISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSL 359 (422)
Q Consensus 288 ~~~--------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~ 359 (422)
... ..++-+......+-..|.....+.+.+..++..++.+++.+.|++. ++.++..|... .+.++-+.
T Consensus 258 ~~~Yl~~~d~ti~gSR~g~~~l~~w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~-~~~~~~~p~~~-~V~f~~~~-- 333 (374)
T PLN03032 258 NVEYLNSRDATIMGSRNGHAPLYLWYTLRRKGYRGIKRDVQHCMRNAHYLKDRLTEA-GLTCRLNELSS-TVVFERPM-- 333 (374)
T ss_pred CCcccCCCCCcccCCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC-CCcEEECCCce-EEEEcCCC--
Confidence 111 1112122233333344555556788889999999999999999987 66655566533 33333331
Q ss_pred ccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHHHHH
Q 014603 360 LEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGRMKA 413 (422)
Q Consensus 360 ~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~l~~ 413 (422)
.. .+. +|..+.+- ++.+|+++. ++.+.++++++.|++
T Consensus 334 ------~~----~~~--~~w~l~~~-----~~~~hi~vm~~~~~~~id~fi~dl~~ 372 (374)
T PLN03032 334 ------DE----AFI--KKWQLACE-----GDIAHVVVMPNVTVEKLDEFVEELVE 372 (374)
T ss_pred ------cH----hHh--heeeeccc-----CCEEEEEECCCCCHHHHHHHHHHHhc
Confidence 11 122 25555431 357899987 677889998888765
No 333
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.82 E-value=1.7e-17 Score=150.23 Aligned_cols=215 Identities=19% Similarity=0.106 Sum_probs=157.6
Q ss_pred CCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHh----hCCCeEEEeec
Q 014603 88 GILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARAT----HSHLEVRHFDL 163 (422)
Q Consensus 88 g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~----~~g~~~~~~~~ 163 (422)
....+++.+++.. ..++++++++|+.|+..++..++..|+.|+....+|.+.....+ .+|+....+..
T Consensus 78 t~~~le~~iaal~--------ga~~~l~fsSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~ 149 (409)
T KOG0053|consen 78 TRDVLESGIAALE--------GAAHALLFSSGMAAITVALLHLLPAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDV 149 (409)
T ss_pred chHHHHHHHHHHh--------CCceEEEecccHHHHHHHHHHhcCCCCcEEEeCCCcccHHHHHHHHHHHhCceeeeech
Confidence 3567778888876 44569999999999999999999999999999999988755544 45656555432
Q ss_pred cCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCC
Q 014603 164 LPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS 243 (422)
Q Consensus 164 ~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~ 243 (422)
-+++.+++.++++++++++..|.||+..+ .||++|+++|+++|+++|+|+.++...+ .....++.
T Consensus 150 -------~~~~~~~~~i~~~t~~V~~ESPsNPll~v---~DI~~l~~la~~~g~~vvVDnTf~~p~~-----~~pL~lGA 214 (409)
T KOG0053|consen 150 -------DDLKKILKAIKENTKAVFLESPSNPLLKV---PDIEKLARLAHKYGFLVVVDNTFGSPYN-----QDPLPLGA 214 (409)
T ss_pred -------hhHHHHHHhhccCceEEEEECCCCCcccc---ccHHHHHHHHhhCCCEEEEeCCcCcccc-----cChhhcCC
Confidence 26778888899899999999999999999 6899999999999999999999876421 12234455
Q ss_pred CCCeEEEecCccccCCCC-ceeEEEEeeCCCCcccchhHHHHHHhhhh-hccCcchHHHHHHHHHHhhchHHHHHHHHHH
Q 014603 244 IVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQGAVPQILEKTEEEFFSKITDI 321 (422)
Q Consensus 244 ~~~~i~i~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~ 321 (422)
| |++.|.+|.+++.+ .=.|.++.+. +++..+++.... ...+++++......+-|+. +.-+.++
T Consensus 215 D---IV~hSaTKyi~Ghsdvi~G~iv~n~-------~~~~~~l~~~~~~lg~~~~p~~~~ll~Rglkt-----l~lRi~~ 279 (409)
T KOG0053|consen 215 D---IVVHSATKYIGGHSDVIGGSVVLNS-------EELASRLKFLQEDLGWCEDPFDLFLLSRGLKT-----LHLRINK 279 (409)
T ss_pred C---EEEEeeeeeecCCcceeeeEEecCc-------HHHHHHHHHHHHHhcCCCCHHHHHHHhcCcch-----hhhhHHH
Confidence 4 99999999987654 3345555532 567777777664 3446677766666555544 3344455
Q ss_pred HHHHHHHHHHHhhcCCCCC
Q 014603 322 LRETADICCDRLKEIPCIT 340 (422)
Q Consensus 322 ~~~~~~~l~~~L~~~~~~~ 340 (422)
..++...+...|+..|.++
T Consensus 280 ~~ena~~~A~~Le~~~~v~ 298 (409)
T KOG0053|consen 280 HSENALKIALLLEAHPKVK 298 (409)
T ss_pred HHHHHHHHHHHhhhCCcee
Confidence 5566666666777655544
No 334
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.82 E-value=4.4e-17 Score=143.24 Aligned_cols=294 Identities=19% Similarity=0.183 Sum_probs=196.0
Q ss_pred CCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccch----HHHHhhCCCeEEEee
Q 014603 87 VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYY----EARATHSHLEVRHFD 162 (422)
Q Consensus 87 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~----~~~~~~~g~~~~~~~ 162 (422)
+....++++|+.+=+ + -.-+.+.+|++|+..++..+.++||.|+..+.-|.+. ...++.+|++++.+.
T Consensus 62 PT~~vlE~RiAaLEG-----G---~aa~a~aSG~AA~~~ai~~la~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~fvd 133 (426)
T COG2873 62 PTTDVLEERIAALEG-----G---VAALAVASGQAAITYAILNLAGAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRFVD 133 (426)
T ss_pred chHHHHHHHHHHhhc-----c---hhhhhhccchHHHHHHHHHhccCCCeeEeeccccCchHHHHHHHHHhcCcEEEEeC
Confidence 456788888888642 1 2346678899999999999999999999999888664 445577899998875
Q ss_pred ccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccC
Q 014603 163 LLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG 242 (422)
Q Consensus 163 ~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~ 242 (422)
. .|++.+++.++++|+++++....||.+.+ -|+++|+++|+++|+++|+|.....- -...++ ..+
T Consensus 134 ~-------~d~~~~~~aI~~nTkavf~EtigNP~~~v---~Die~ia~iAh~~gvpliVDNT~atp----yl~rP~-~hG 198 (426)
T COG2873 134 P-------DDPENFEAAIDENTKAVFAETIGNPGLDV---LDIEAIAEIAHRHGVPLIVDNTFATP----YLCRPI-EHG 198 (426)
T ss_pred C-------CCHHHHHHHhCcccceEEEEeccCCCccc---cCHHHHHHHHHHcCCcEEEecCCCcc----eecchh-hcC
Confidence 2 37899999999999999999999999999 47999999999999999999998641 111122 233
Q ss_pred CCCCeEEEecCccccCCCCceeEEEEeeCCCCcccc----hhH---------------------HHHHHhh--hhhccCc
Q 014603 243 SIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQD----SGI---------------------VDSIKSF--LNISSDP 295 (422)
Q Consensus 243 ~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~----~~~---------------------~~~~~~~--~~~~~~~ 295 (422)
.+ |++.|.+|+.++.|.-+|-+++......+.. |.+ +-+.+.. +....+.
T Consensus 199 AD---IVvHS~TK~igGhGt~iGG~iVD~G~FDw~~~~rfP~~~~p~p~YhGl~~~~~~g~~af~~~~r~~~lRDlGa~l 275 (426)
T COG2873 199 AD---IVVHSATKYIGGHGTAIGGVIVDGGKFDWTANGRFPEFTTPDPSYHGLVYTETFGNAAFIIKARVQLLRDLGATL 275 (426)
T ss_pred CC---EEEEeecccccCCccccceEEEeCCccccccCCCCcccCCCCccccceehhhhcccHHHHHHHHHHHHHhccccc
Confidence 33 9999999999999999998888655444421 110 0011111 1112233
Q ss_pred chHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC-----------------CceEEEEecCcc
Q 014603 296 ATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPE-----------------GSMFVMVKLNYS 358 (422)
Q Consensus 296 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-----------------~g~~~~~~~~~~ 358 (422)
+++.......-|+. +.-+.++..++...+.+.|+++|.+..+.+|. .|-.+.+.+..+
T Consensus 276 sPfnAfl~lqGlET-----L~LRmerH~~NA~~vA~~L~~HpkV~~V~YpgL~~~~~h~la~kyl~~g~g~vltF~~kgg 350 (426)
T COG2873 276 SPFNAFLLLQGLET-----LSLRMERHCENALKVAEFLENHPKVAWVNYPGLASHPYHALAKKYLPKGAGAVLTFGVKGG 350 (426)
T ss_pred CcHHHHHHHhchhh-----hHHHHHHHHHhHHHHHHHHhcCCCeeeeecCCCCCCcchhHHHhhccCCCceEEEEEecCh
Confidence 33333333333322 45566778889999999999988876554442 233445555432
Q ss_pred cccCCCCHHHHHHHH------H---HhcCeEEecCCCCCC-------------CCeEEEEeccChHHHHHHHHHHHHHHH
Q 014603 359 LLEGINSDMEFALKL------A---KEESVIVLPGITVGL-------------KDWLRITFAVEPSALEDGLGRMKAFYD 416 (422)
Q Consensus 359 ~~~~~~~~~~~~~~l------~---~~~gi~v~~g~~~~~-------------~~~iRis~~~~~~~l~~~~~~l~~~~~ 416 (422)
. .....+++.+ + ..+-+.+-|.+.-.. ++.||+|++. |+++.++..|+++++
T Consensus 351 ~----ea~~~fi~~l~L~s~laNvGD~rsLvIHPAsTTH~ql~~ee~~~aGv~~~~IRlSVGI--Ed~~DiiaDl~qAl~ 424 (426)
T COG2873 351 Y----EAGKKFIDALKLFSHLANIGDARSLVIHPASTTHRQLSEEEQAAAGVTPDLIRLSVGI--EDIDDIIADLEQALE 424 (426)
T ss_pred H----HHHHHHHHHHHHHHhhccccccceeEecCcccchhcCCHHHHHhcCCCCCcEEEEecc--CCHHHHHHHHHHHHh
Confidence 1 1122332322 1 122344555443211 6789999997 567777778887775
Q ss_pred H
Q 014603 417 R 417 (422)
Q Consensus 417 ~ 417 (422)
.
T Consensus 425 ~ 425 (426)
T COG2873 425 A 425 (426)
T ss_pred c
Confidence 3
No 335
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.81 E-value=2.2e-16 Score=147.09 Aligned_cols=309 Identities=17% Similarity=0.150 Sum_probs=198.5
Q ss_pred CCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHH-HhhCCCeEEE
Q 014603 82 CYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEAR-ATHSHLEVRH 160 (422)
Q Consensus 82 ~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~-~~~~g~~~~~ 160 (422)
.|...+...+|++.+++++ ..+.++.+++||.|+++++...+++||.| +...|...... ....|...+.
T Consensus 73 ~Yagd~s~~~LE~~vAe~l--------G~e~aV~v~sGTaAl~ll~~l~v~pGd~V--p~n~~f~Tt~ahI~~~Ga~fvD 142 (460)
T PRK13237 73 AYAGSRNFYHLEETVQEYY--------GFKHVVPTHQGRGAENLLSRIAIKPGQYV--PGNMYFTTTRYHQELNGGIFVD 142 (460)
T ss_pred hhcCCCcHHHHHHHHHHHH--------CCCeEEEeCCHHHHHHHHHHhCCCCcCEE--CCccchHhhHHHHHhCCcEEEe
Confidence 6887778899999999999 34579999999999999877778999965 55545433333 5566664443
Q ss_pred eecc--------CCCCcccCHHHHHHhhcCC----ceEEEEeCCCCCc-ccccCHHHHHHHHHHHHHcCcEEEEcccccc
Q 014603 161 FDLL--------PAKGWEVDLDAVEALADEN----TVALVIINPGNPC-GNVYTYQHLQKIAETAKKLGIMVIADEVYDH 227 (422)
Q Consensus 161 ~~~~--------~~~~~~~d~~~l~~~~~~~----~~~i~i~~p~npt-G~~~~~~~l~~i~~~~~~~~~~li~D~~~~~ 227 (422)
+..+ ....+.+|++.|++.++++ +..+.+..++|.. |...|.++++++.++|++||+.||+|.++..
T Consensus 143 i~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAra~ 222 (460)
T PRK13237 143 IIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDATRCV 222 (460)
T ss_pred eecccccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcchh
Confidence 3211 1235789999999988653 3346667777877 7888999999999999999999999999864
Q ss_pred cc----------cCCCCCCC-ccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhhhc-c--
Q 014603 228 LA----------FGNTPFVP-MGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNIS-S-- 293 (422)
Q Consensus 228 ~~----------~~~~~~~~-~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-- 293 (422)
.. |.+..... +..+... -...+.|++|.++.+- -|++++++ +++.++++...-.+ +
T Consensus 223 gna~fI~~re~~y~~~~i~ei~~e~~s~-aD~~t~S~~K~~~~~~--GG~i~t~D-------~eL~~~~r~~~~~~eG~~ 292 (460)
T PRK13237 223 ENAYFIKEREEGYQDKSIKEIVHEMFSY-ADGCTMSGKKDCLVNI--GGFLAMND-------EELFDEAKELVVVYEGMP 292 (460)
T ss_pred cChhhhcccccccCCCcHhHHhhhccCc-CcEEEEeCCCCCCCCC--ceEEEECC-------HHHHHHHHHhccccCCCc
Confidence 21 22211100 0011111 1267778999976651 28888876 67888887764211 1
Q ss_pred ---CcchHHHHHHHHHHhhch-HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCc----ccccCCCC
Q 014603 294 ---DPATFIQGAVPQILEKTE-EEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNY----SLLEGINS 365 (422)
Q Consensus 294 ---~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~~~ 365 (422)
+.+.--+.++...|.+.. ..++..+... .++|.+.|.+. |+.++ .|.+|.-+++.... -..... .
T Consensus 293 tygg~~grd~~alAvgl~E~~~~~y~~~ri~~----~~~l~~~L~~~-Gvpv~-~p~ggH~v~vda~~~lph~~~~~~-p 365 (460)
T PRK13237 293 SYGGMAGRDMEAMAIGIEESVQYEYIEHRVGQ----VRYLGEKLLAA-GVPIV-EPVGGHAVFLDARRFLPHLPQDQF-P 365 (460)
T ss_pred CCCChhhhHHHHHHhHHHhhchHHHHHHHHHH----HHHHHHHHHHC-CCcee-cCCCceEEEEEhHHhCCCCCcccC-h
Confidence 222223444444454422 3444444444 45566666665 78744 78888777775322 111111 3
Q ss_pred HHHHHHHHHHhcCeEEec-CCC-CCC-----------CCeEEEEec---cChHHHHHHHHHHHHHHHH
Q 014603 366 DMEFALKLAKEESVIVLP-GIT-VGL-----------KDWLRITFA---VEPSALEDGLGRMKAFYDR 417 (422)
Q Consensus 366 ~~~~~~~l~~~~gi~v~~-g~~-~~~-----------~~~iRis~~---~~~~~l~~~~~~l~~~~~~ 417 (422)
...+..+|-.+.||--.- |+. ++. -..+|+.+. .+.+.++...++|..+.++
T Consensus 366 ~~al~~~ly~~~GiR~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~ 433 (460)
T PRK13237 366 AQALAAELYIESGVRSMERGIVSAGRDPKTGENHYPKLELVRLTIPRRVYTYAHMDVVADSVIKLYKH 433 (460)
T ss_pred HHHHHHHHHHHhCcCeEeecceecccCCCCCccCCCccceeeeccccccccHHHHHHHHHHHHHHHHh
Confidence 566666766677875432 221 111 157999997 4789999999999887654
No 336
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.81 E-value=1.1e-17 Score=144.08 Aligned_cols=339 Identities=17% Similarity=0.186 Sum_probs=221.8
Q ss_pred CCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCC---CCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHH
Q 014603 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFN---CYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT 120 (422)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~---~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~ 120 (422)
|..++||=.+.... ..-..+|.+++++.++.+.-... .|.. -..++.+.+.+++ ..+.++-++.|-
T Consensus 58 Gk~ylDflsaysaV-nqGhchpki~~aLqeq~~kLtlssrafYnd--~~~~f~~~vt~lf--------~~~kvlpmnTGa 126 (427)
T KOG1402|consen 58 GKEYLDFLSAYSAV-NQGHCHPKIIKALQEQADKLTLSSRAFYND--VLGEFAEYVTKLF--------GYDKVLPMNTGA 126 (427)
T ss_pred ccchhhhhhhhhhc-ccCCCCHHHHHHHHHHHhHhhhhhHHHhhh--hHHHHHHHHHHhc--------Ccceeeecccch
Confidence 66777776554332 33467899999999998752221 2222 2345555555555 456788888889
Q ss_pred HHHHHHHHHhc------C--CC--CEEEecCCCccchHHHHhhCCCeEE----EeeccCCC----CcccCHHHHHHhhcC
Q 014603 121 QAIEVILTVLA------R--PG--ANILLPRPGFPYYEARATHSHLEVR----HFDLLPAK----GWEVDLDAVEALADE 182 (422)
Q Consensus 121 ~a~~~~~~~l~------~--~g--d~Vl~~~~~~~~~~~~~~~~g~~~~----~~~~~~~~----~~~~d~~~l~~~~~~ 182 (422)
+|.+.++.... + |. ..|+....+|++-...+-..+.+.. +-|.-|.. .| -|.+.|+.+++.
T Consensus 127 Ea~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~~~~v~Y-~d~eale~~l~~ 205 (427)
T KOG1402|consen 127 EAVETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGVVDKVPY-GDAEALEVALKS 205 (427)
T ss_pred hHHHHHHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEecCCcchhhccCCCCCCcceeecc-CCHHHHHHHhcC
Confidence 99998876543 1 32 2566666777664322222221110 00111110 11 278899999887
Q ss_pred CceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCC
Q 014603 183 NTVALVIINP-GNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVP 260 (422)
Q Consensus 183 ~~~~i~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~ 260 (422)
...+.++..| +...|++ +|+..+++..++|.+||+++|.||+|.++.++|+.. ....-+..++++++ .|.+++.
T Consensus 206 ~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk~l-a~d~env~PDivil---gKalSGG 281 (427)
T KOG1402|consen 206 PNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGKLL-ACDYENVRPDIVIL---GKALSGG 281 (427)
T ss_pred CCeeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCcEE-EeehhhcCCCeEEE---eccccCC
Confidence 6677777777 7788875 667789999999999999999999999999988632 11111222335555 4987555
Q ss_pred CceeEEEEeeCCCCcccchhHHHHHHhhhh-hccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcC---
Q 014603 261 GWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEI--- 336 (422)
Q Consensus 261 G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--- 336 (422)
=.++..+++. .+++..++...+ .+.+.+++..+++.++|+...+ +++.++.+.+-+.++..|.++
T Consensus 282 ~~Pvsavl~~--------~~im~~~~pgeHgsTyggNpLg~~vaiAalevi~e---ekL~era~~lG~~l~~~L~~l~~~ 350 (427)
T KOG1402|consen 282 VYPVSAVLAD--------DDIMLNIKPGEHGSTYGGNPLGCAVAIAALEVIVE---EKLVERAAKLGEILRDQLNKLQKK 350 (427)
T ss_pred eeeeEEEEec--------HHHHhccCCCccccccCCChHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHhcccc
Confidence 5788888875 467777766553 3568899999999999886443 344555666666777777765
Q ss_pred -CCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHHHHH
Q 014603 337 -PCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGRMKA 413 (422)
Q Consensus 337 -~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~l~~ 413 (422)
|++. .....-|++..+.+.....++. ++.+.+..+ ++.|++..|.+ .+.||+.+. .+++++++++++|.+
T Consensus 351 ~p~~v-~~VRGrGl~~ai~i~~~~~~~~-~aw~~cl~l-k~~g~LAkptH----~~IiRfaPPL~I~e~dl~eg~e~i~k 423 (427)
T KOG1402|consen 351 FPHVV-KEVRGRGLLNAIVINPSKTSGQ-DAWDVCLAL-KENGLLAKPTH----GNIIRFAPPLVISEEDLREGIEAIEK 423 (427)
T ss_pred ccchh-heeeccceEEEEEeccccccch-hHHHHHHcc-cccccccCCCC----CCeEEecCCcccCHHHHHHHHHHHHH
Confidence 3333 2234457787777764332222 455665554 77899988865 578999987 789999999999998
Q ss_pred HHH
Q 014603 414 FYD 416 (422)
Q Consensus 414 ~~~ 416 (422)
++.
T Consensus 424 ~i~ 426 (427)
T KOG1402|consen 424 TIA 426 (427)
T ss_pred Hhc
Confidence 864
No 337
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.81 E-value=2.2e-17 Score=157.23 Aligned_cols=340 Identities=13% Similarity=0.080 Sum_probs=195.5
Q ss_pred cCCCCceeecCCCCCCCCCCCCcHHHHHHHHHH-hhCCCC--CCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecC
Q 014603 42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHS-VRSARF--NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLG 118 (422)
Q Consensus 42 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~-~~~~~~--~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g 118 (422)
.+|+.++||..|......+ ..+|.+.+++.++ ...... ..+.. ....++.+.+++.+.... +...+.++|++|
T Consensus 55 ~dG~~ylD~~sg~~~~~lG-h~~p~i~~Ai~~q~~~~~l~~~~~~~~-~~~~~la~~l~~~l~~~~--p~~~~~v~f~~S 130 (464)
T TIGR00699 55 VDGNRLLDLYSQISSIPIG-YNNPALLKAAQSPEMATTLINRPALGN-FPSKDWAKILKEGILKVA--PKGQDQVWTGMS 130 (464)
T ss_pred CCCCEEEEccCCHhhhcCC-CCCHHHHHHHHHHHHHHhhcccccCCc-HHHHHHHHHHHHhHHhhC--CCCcCEEEEeCC
Confidence 3688899999887654232 4688999999984 232111 11211 112334444443222222 123468999999
Q ss_pred HHHHHHHHHHHhcC--------------------------C---CCEEEecCCCccchHHHHhhC-CCe-----------
Q 014603 119 CTQAIEVILTVLAR--------------------------P---GANILLPRPGFPYYEARATHS-HLE----------- 157 (422)
Q Consensus 119 ~~~a~~~~~~~l~~--------------------------~---gd~Vl~~~~~~~~~~~~~~~~-g~~----------- 157 (422)
|++|++.+++.... + ..+|+....+||+....+... +..
T Consensus 131 GsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~~~~~~~~~ 210 (464)
T TIGR00699 131 GSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAFD 210 (464)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCC
Confidence 99999999886521 1 127999999999875544432 211
Q ss_pred EEEeeccCC-CCc-----------ccCHHHHHHhhcC--CceEEEEeCC-CCCccccc-CHHHHHHHHHHHHHcCcEEEE
Q 014603 158 VRHFDLLPA-KGW-----------EVDLDAVEALADE--NTVALVIINP-GNPCGNVY-TYQHLQKIAETAKKLGIMVIA 221 (422)
Q Consensus 158 ~~~~~~~~~-~~~-----------~~d~~~l~~~~~~--~~~~i~i~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~ 221 (422)
...+|.... ..+ .-+++.+++.+.. +..+.+|..| ....|.+. +++.++++.++|++||+++|+
T Consensus 211 ~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~ 290 (464)
T TIGR00699 211 WPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIV 290 (464)
T ss_pred ceecCCCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEE
Confidence 011111100 000 0134556666642 3456666777 55567654 788899999999999999999
Q ss_pred cccccccccCCCCCCCccccCCC--CCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHh-hhhhccCcchH
Q 014603 222 DEVYDHLAFGNTPFVPMGVFGSI--VPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKS-FLNISSDPATF 298 (422)
Q Consensus 222 D~~~~~~~~~~~~~~~~~~~~~~--~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 298 (422)
||++.++..+|... ....++.. +++ .+++|.++..| +++.. +....... ....+...+++
T Consensus 291 DEV~tGfGrtG~~f-a~e~~gv~~~PDi---~t~gK~lg~gG----~~~~~---------~~~~~~~~~~~~~T~~gnp~ 353 (464)
T TIGR00699 291 DEVQTGVGATGKFW-AHEHWNLDDPPDM---VTFSKKFQTAG----YFFHD---------PAFRPNKPYRQFNTWMGDPS 353 (464)
T ss_pred eeeeeCCCCCcchh-HHHhcCCCCCCCE---EEehhhhccCC----ccccc---------hhccCCCCcccccCCCCCHH
Confidence 99999887766432 22222221 233 34579864444 33322 11110011 12335577888
Q ss_pred HHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhh----cCCC-CCCCCCCCCceEEEEecCcccccCCCCHHHHHHHH
Q 014603 299 IQGAVPQILEKTEEEFFSKITDILRETADICCDRLK----EIPC-ITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKL 373 (422)
Q Consensus 299 ~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~----~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l 373 (422)
+.+++.+.|+...++ +..++++++-+++.+.|+ ++|. +..+-....|.++.+.++... ....+...+
T Consensus 354 ~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vRg~G~Glm~gie~~~~~-----~~~~i~~~~ 425 (464)
T TIGR00699 354 RALILREIIQEIKRK---DLLENVAHVGDYLYTGLEDLQKKYPEFIQNLRGKGRGTFIAWDTPDEA-----KRDKLLKKA 425 (464)
T ss_pred HHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHhCCCceeeecccCeEEEEEEecCCHH-----HHHHHHHHH
Confidence 888888888764322 223333333334444443 3442 221101134777777775320 133454544
Q ss_pred HHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHHHHHHH
Q 014603 374 AKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGRMKAFY 415 (422)
Q Consensus 374 ~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~l~~~~ 415 (422)
.++|+++.+.. .+.+|+.++ ++++++++++++|.+++
T Consensus 426 -~~~Gvl~~~~g----~~~ir~~Ppl~it~~eid~~~~~l~~~~ 464 (464)
T TIGR00699 426 -RNNGVNIGGCG----VKAIRLRPMLVFQKHHADIFLEIISKII 464 (464)
T ss_pred -HHCCcEEecCC----CCeEEEeCCCCCCHHHHHHHHHHHHHhC
Confidence 55699997641 478999987 79999999999998764
No 338
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.81 E-value=1.5e-17 Score=141.09 Aligned_cols=328 Identities=13% Similarity=0.116 Sum_probs=208.8
Q ss_pred CCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCC------CCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEec
Q 014603 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFN------CYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTL 117 (422)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~------~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~ 117 (422)
...++||+.++ |.++..+|++.++-.+++...... -.+....+..|+.+||+|- ..++.++.+
T Consensus 66 ~k~ilnFcaNn---YLGLsshPeii~a~~~aleeyGaGlssvrfIcGtq~iHk~LE~kiAqfh--------~rED~ilyp 134 (417)
T KOG1359|consen 66 DKKILNFCANN---YLGLSSHPEIINAGQKALEEYGAGLSSVRFICGTQDIHKLLESKIAQFH--------GREDTILYP 134 (417)
T ss_pred ccceeeecccc---cccccCChHHHHHHHHHHHHhCCCccceeEEecchHHHHHHHHHHHHHh--------CCCceEEec
Confidence 34578998887 667788999999988888752110 0111234678899999987 456788899
Q ss_pred CHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhh----cCCceEEEEeCC-
Q 014603 118 GCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALA----DENTVALVIINP- 192 (422)
Q Consensus 118 g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~----~~~~~~i~i~~p- 192 (422)
++-.|+..++.+++.|.|.|+.....|.++....+... .+ ..+|+-.++..+ +.+-+ ++++..
T Consensus 135 scfdANag~feail~pedAvfSDeLNhASIIdGirLck----ry-------~h~dv~~l~~~l~~a~k~r~k-lv~TDg~ 202 (417)
T KOG1359|consen 135 SCFDANAGAFEAILTPEDAVFSDELNHASIIDGIRLCK----RY-------RHVDVFDLEHCLISACKMRLK-LVVTDGV 202 (417)
T ss_pred cccccchHHHHHhcChhhhhhccccccchhhhhhHHHh----hh-------ccchhHHHHHHHHHhhhheEE-EEEecce
Confidence 99999999999999999999999999988766655433 11 114545555432 22333 444544
Q ss_pred CCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCC-CCeEEEecCccccC-CCCceeEEEEee
Q 014603 193 GNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSI-VPVLTLGSISKRWI-VPGWRLGWLVTS 270 (422)
Q Consensus 193 ~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~-~~~i~i~s~sK~~~-~~G~r~G~~~~~ 270 (422)
-...|.+. ++++|.+++++||.++++||+|..+.++..+...-+.++.. +..++.++++|.+| ..| ||..+|
T Consensus 203 FSMDGdia---Pl~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlGga~G---Gyttgp 276 (417)
T KOG1359|consen 203 FSMDGDIA---PLEEISQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALGGASG---GYTTGP 276 (417)
T ss_pred eccCCCcc---cHHHHHHHHHhcCcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhhhhcCCCC---CCccCC
Confidence 56778874 57777888889999999999998766543333333334322 23488889999986 455 899887
Q ss_pred CCCCcccchhHHHHHHhhhh--hcc-CcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCC
Q 014603 271 DPNGILQDSGIVDSIKSFLN--ISS-DPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEG 347 (422)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~ 347 (422)
. .++..++.... .++ +.++.....+.++++.. ..-.+...+.+.+.+++++..+.- |+.+. ...
T Consensus 277 ~--------~li~llrqr~RpylFSnslppavV~~a~ka~dll--m~s~~~i~~~~a~~qrfr~~me~a-GftIs-g~~- 343 (417)
T KOG1359|consen 277 K--------PLISLLRQRSRPYLFSNSLPPAVVGMAAKAYDLL--MVSSKEIQSRQANTQRFREFMEAA-GFTIS-GAS- 343 (417)
T ss_pred h--------hHHHHHHhcCCceeecCCCChhhhhhhHHHHHHH--HhhHHHHHHHHHHHHHHHHHHHhc-Cceec-CCC-
Confidence 4 46665554432 122 22222222223333321 112344556667777777776654 66622 211
Q ss_pred ceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC---CCeEEEEec--cChHHHHHHHHHHHHHHHHhc
Q 014603 348 SMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL---KDWLRITFA--VEPSALEDGLGRMKAFYDRHA 419 (422)
Q Consensus 348 g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~---~~~iRis~~--~~~~~l~~~~~~l~~~~~~~~ 419 (422)
-...-+.+.+. ..+....++++++ ||.|..-+.+.. .-.+|+.++ +++++++++++++.++.+.+.
T Consensus 344 hPI~pv~lGda-----~lA~~~ad~lLk~-Gi~Vigfs~PvVP~gkariRVqiSAaHt~edid~~i~Af~~vgr~~~ 414 (417)
T KOG1359|consen 344 HPICPVMLGDA-----RLASKMADELLKR-GIYVIGFSYPVVPKGKARIRVQISAAHTEEDIDRLIEAFSEVGRFLN 414 (417)
T ss_pred CCccceecccH-----HHHHHHHHHHHhc-CceEEeecCCcCCCCceEEEEEEehhcCHHHHHHHHHHHHHHHHhhc
Confidence 12322333221 1345667777665 999987665544 346777776 899999999999999887653
No 339
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.80 E-value=1.1e-16 Score=142.34 Aligned_cols=338 Identities=17% Similarity=0.148 Sum_probs=224.7
Q ss_pred CCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCC------CCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecC
Q 014603 45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFN------CYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLG 118 (422)
Q Consensus 45 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~------~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g 118 (422)
+..|+|=-.. | -.++.|++++-..+.+...- .|+--...+++++...+..++.+| .+..+|... |
T Consensus 26 ~~~ieLIASE-----N-~~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFg--a~~anVQPh-S 96 (413)
T COG0112 26 REHIELIASE-----N-FTSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFG--AEYANVQPH-S 96 (413)
T ss_pred hhceeeeecc-----c-cCCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHHhC--CCccccCCC-C
Confidence 4566664332 2 35689999998887663332 333344566777777676666554 333455544 4
Q ss_pred HHHHHHHHHHHhcCCCCEEEecCCCccchHHHH---hhCC--CeEEEeeccCCCCcccCHHHHHHhhcC-CceEEEEeCC
Q 014603 119 CTQAIEVILTVLARPGANILLPRPGFPYYEARA---THSH--LEVRHFDLLPAKGWEVDLDAVEALADE-NTVALVIINP 192 (422)
Q Consensus 119 ~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~---~~~g--~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~i~~p 192 (422)
|++|+.+++.++++|||+|+-.+-.+.++.... ...| .+.+.++++++ +..+|.|++++...+ ++++++.-..
T Consensus 97 Gs~AN~av~~All~pGDtimgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd~e-t~~IDyD~~~k~a~e~kPK~ii~G~S 175 (413)
T COG0112 97 GSQANQAVYLALLQPGDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVDPE-TGLIDYDEVEKLAKEVKPKLIIAGGS 175 (413)
T ss_pred chHHHHHHHHHHcCCCCeEecccCCCCCcccCCCCCCccceeEEeEecccccc-cCccCHHHHHHHHHHhCCCEEEECcc
Confidence 567888999999999999999887775543222 1222 45667777653 457999999987654 6666654322
Q ss_pred CCCcccccCHHHHHHHHHHHHHcCcEEEEccccc-ccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeC
Q 014603 193 GNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYD-HLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD 271 (422)
Q Consensus 193 ~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~-~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~ 271 (422)
..|- .-+++++.++|++-|.++++|.+|- ++.-+|..+.++.. . .++.+|.+|+| +|.|-|.+++++
T Consensus 176 aY~r-----~id~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~~~--A---dvVTtTTHKTl--rGPrGG~Il~~~ 243 (413)
T COG0112 176 AYSR-----PIDFKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPLPH--A---DVVTTTTHKTL--RGPRGGIILTND 243 (413)
T ss_pred cccc-----ccCHHHHHHHHHHhCceEEehHHHHHHHHhcccCCCCCCc--c---ceEeCCcccCC--CCCCceEEEecc
Confidence 2211 1368999999999999999999985 45455655555443 2 28899999994 788889998864
Q ss_pred CCCcccchhHHHHHHhhhhh--ccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCce
Q 014603 272 PNGILQDSGIVDSIKSFLNI--SSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSM 349 (422)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~ 349 (422)
+++.+++...... .++|.....++...++.+..+..+++..+++-++.+.|.+.|.+. |+.++.......
T Consensus 244 -------eel~kkin~aVFPg~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~-G~~vvsGgTdnH 315 (413)
T COG0112 244 -------EELAKKINSAVFPGLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKER-GFKVVSGGTDNH 315 (413)
T ss_pred -------HHHHHHhhhhcCCccCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHc-CCeEecCCccce
Confidence 4677777765432 345544555555556665445667888899999999999999987 777553333344
Q ss_pred EEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCC-C-----CCCeEEEEec------cChHHHHHHHHHHHHHHHH
Q 014603 350 FVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITV-G-----LKDWLRITFA------VEPSALEDGLGRMKAFYDR 417 (422)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~-~-----~~~~iRis~~------~~~~~l~~~~~~l~~~~~~ 417 (422)
.+.+.+... + -....++.++.+.||.+.--.-+ . ....|||... ..++++++..+.|.+++..
T Consensus 316 l~lVDl~~~---~--~~Gk~ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl~~ 390 (413)
T COG0112 316 LVLVDLRSK---G--LTGKKAEAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIADLIADVLDG 390 (413)
T ss_pred EEEEEcccC---C--CCHHHHHHHHHHcCEeeccCCCCCCCCCCCCCccceeccHHHhhcCCCHHHHHHHHHHHHHHHhc
Confidence 555666521 1 13445566778889988743221 1 1567999975 3467999998888888765
No 340
>PLN02271 serine hydroxymethyltransferase
Probab=99.80 E-value=2.5e-16 Score=148.94 Aligned_cols=346 Identities=12% Similarity=0.033 Sum_probs=219.2
Q ss_pred CCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCC------CCCCCHHHHHHHHHHHhhcCCCCCCC--CCEEEe
Q 014603 45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYS------STVGILPARRAIADYLNRDLPYKLSP--DDVYLT 116 (422)
Q Consensus 45 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~------~~~g~~~lr~~ia~~l~~~~~~~~~~--~~i~~~ 116 (422)
..-|+|=-.. | -+++.+++++...+.+....+|+ -...+.+++....+...+.++..... .+|...
T Consensus 148 ~~~l~LIASE-----N-~~S~av~~algS~ltnkYaEG~pG~Ryy~G~~~iD~iE~la~era~~lF~~~~~~~gaNVQp~ 221 (586)
T PLN02271 148 FKGIELIASE-----N-FVCRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIERLCCERALAAFGLDSEKWGVNVQPY 221 (586)
T ss_pred hcCeeecccc-----c-cCCHHHHHHhcCcccccCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHhCCcccccccceeec
Confidence 4456663332 2 35688888888777664333333 23345567666666666555422111 344444
Q ss_pred cCHHHHHHHHHHHhcCCCCEEEecCCCccchHHH---------HhhCCCeEEE--eeccCCCCcccCHHHHHH-hhcCCc
Q 014603 117 LGCTQAIEVILTVLARPGANILLPRPGFPYYEAR---------ATHSHLEVRH--FDLLPAKGWEVDLDAVEA-LADENT 184 (422)
Q Consensus 117 ~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~---------~~~~g~~~~~--~~~~~~~~~~~d~~~l~~-~~~~~~ 184 (422)
+|+.|+.+++.++++|||+|+..+..|.+.... +...|..... +++++ ..+.+|.+++++ +...++
T Consensus 222 -SGs~AN~aV~~ALl~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~-~~g~IDyd~lek~a~~~rP 299 (586)
T PLN02271 222 -SCTSANFAVYTGLLLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNP-QTGYIDYDKLEEKALDFRP 299 (586)
T ss_pred -cHHHHHHHHHHHhcCCCCEEEEecCCCCCchhcccccccccccccccceEEEEEccccc-ccCccCHHHHHHHhhhcCC
Confidence 778899999999999999999988877654332 2334544444 44543 345689999998 557788
Q ss_pred eEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCC-CCCCccccCCCCCeEEEecCccccCCCCce
Q 014603 185 VALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNT-PFVPMGVFGSIVPVLTLGSISKRWIVPGWR 263 (422)
Q Consensus 185 ~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r 263 (422)
++|++....+| .. -+++++.++|+++|+++++|.+|......+. .+.++. .. .++.+|.+|++ .|.|
T Consensus 300 KLII~g~Sayp--r~---~D~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~~sP~~--~a---Dvvt~TTHKtL--rGPr 367 (586)
T PLN02271 300 KILICGGSSYP--RE---WDYARFRQIADKCGAVLMCDMAHISGLVAAKECVNPFD--YC---DIVTSTTHKSL--RGPR 367 (586)
T ss_pred eEEEECchhcc--Cc---CCHHHHHHHHHHcCCEEEEECcccccccccCcCCCCCc--CC---cEEEeCCcccC--CCCC
Confidence 98887666676 33 2578888999999999999999976443222 112222 12 28899999995 5556
Q ss_pred eEEEEeeCCCC------------cccchhHHHHHHhhhh--hccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHH
Q 014603 264 LGWLVTSDPNG------------ILQDSGIVDSIKSFLN--ISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADIC 329 (422)
Q Consensus 264 ~G~~~~~~~~~------------~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l 329 (422)
.|.+++++... ....+++.+++..... +.+++.....++...++.+.....+.+..+++.++.+.|
T Consensus 368 GG~I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea~~~efk~Ya~QVv~NAkaL 447 (586)
T PLN02271 368 GGIIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVATPEYKAYMQQVKKNAQAL 447 (586)
T ss_pred ceEEEecccccccccCCccccccccccHHHHHHhhcccCCccccChhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHH
Confidence 68888753200 0000234455544332 223444445666666676544344578889999999999
Q ss_pred HHHhhcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCC-----CCCeEEEEec------
Q 014603 330 CDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVG-----LKDWLRITFA------ 398 (422)
Q Consensus 330 ~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~-----~~~~iRis~~------ 398 (422)
.+.|.+. |+.++........+++.+.... .....+++.|++.||.+..-.-++ ..+.+||...
T Consensus 448 A~~L~~~-G~~vv~ggTdnHlvLvDl~~~g-----~~G~~ae~~Le~~~I~~Nkn~iP~d~~~~~psGiRiGT~alT~rG 521 (586)
T PLN02271 448 ASALLRR-KCRLVTGGTDNHLLLWDLTTLG-----LTGKNYEKVCEMCHITLNKTAIFGDNGTISPGGVRIGTPAMTSRG 521 (586)
T ss_pred HHHHHHC-CCeEeeCCCCcceeeecCcccC-----CCHHHHHHHHHHcCeEeccccCCCCCCCCCCCcccccCHHHHhcC
Confidence 9999887 7775544444556777774321 134556777788899886433222 2567999975
Q ss_pred cChHHHHHHHHHHHHHHH
Q 014603 399 VEPSALEDGLGRMKAFYD 416 (422)
Q Consensus 399 ~~~~~l~~~~~~l~~~~~ 416 (422)
..+++++++.+.|.++++
T Consensus 522 ~~e~d~~~iA~~i~~~~~ 539 (586)
T PLN02271 522 CLESDFETIADFLLRAAQ 539 (586)
T ss_pred CCcHHHHHHHHHHHHHHh
Confidence 356888888888888875
No 341
>PLN02452 phosphoserine transaminase
Probab=99.80 E-value=1.2e-16 Score=148.16 Aligned_cols=324 Identities=13% Similarity=0.098 Sum_probs=212.6
Q ss_pred CceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCC--------CCCCCC--CCCCHHHHHHHHHHHhhcCCCCCCCCCEEE
Q 014603 46 PLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSAR--------FNCYSS--TVGILPARRAIADYLNRDLPYKLSPDDVYL 115 (422)
Q Consensus 46 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~--------~~~y~~--~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~ 115 (422)
..++|+-|. ...|++|++++.+.+.+.. ..+..+ ...+.+.++.+.+++ +.+-+.+-+++
T Consensus 7 ~~~~f~pGP------~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~f~~i~~~~~~~L~~l~----~~p~~y~v~~l 76 (365)
T PLN02452 7 RVFNFSAGP------ATLPANVLAKAQAELYNWEGSGMSVMEMSHRGKEFLSIIQKAEADLRELL----DIPDNYEVLFL 76 (365)
T ss_pred ceEeeeCCC------CCCCHHHHHHHHHHHhcccccCccccccCCCchHHHHHHHHHHHHHHHHh----CCCCCceEEEE
Confidence 357887775 3567899999988753311 111111 122344455555555 32223345567
Q ss_pred ecCHHHHHHHHHHHhcCCCCEEEecCCCccc--hHHHHhhCCCeEEEeeccCCCC--cccCHHHHHHhhcCCceEEEEeC
Q 014603 116 TLGCTQAIEVILTVLARPGANILLPRPGFPY--YEARATHSHLEVRHFDLLPAKG--WEVDLDAVEALADENTVALVIIN 191 (422)
Q Consensus 116 ~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~--~~~d~~~l~~~~~~~~~~i~i~~ 191 (422)
..|||.++++++..++.+|+++++...+.++ +...++.+|...+.... +..+ ..+++++++. +++...+.+++
T Consensus 77 ~Gsgt~~~ea~~~nl~~~~~~~l~~~~G~fg~r~~~~a~~~g~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~v~~~h 153 (365)
T PLN02452 77 QGGASTQFAAIPLNLCKPGDKADFVVTGSWSKKAAKEAKKYCKTNVIASG-KDEKYTKIPSVSEWEL--TPDAKFVHICA 153 (365)
T ss_pred eCccHHHHHHHHHhcCCCCCeEEEEECCHHHHHHHHHHHHhCCCcEEEec-CCCCCCCCCChHHcCC--CCCCcEEEECC
Confidence 7999999999999999999999988877765 35666777753333311 1121 1345665522 34567788888
Q ss_pred CCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeC
Q 014603 192 PGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD 271 (422)
Q Consensus 192 p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~ 271 (422)
....||+.++ +++++. ++++|+|.+++. +..+.++..++ +.+.|..|.+|.+| +|++++++
T Consensus 154 nETstGv~~~--~~~~i~------~~~lvVDa~Ss~----g~~pidv~~~~-----v~~~saqK~lGP~G--l~~v~vr~ 214 (365)
T PLN02452 154 NETIHGVEFK--DYPDVG------NVPLVADMSSNF----LSKPVDVSKYG-----VIYAGAQKNVGPSG--VTIVIIRK 214 (365)
T ss_pred CCCCCcEecC--cccccC------CCeEEEECCccc----cCcccCHHHcC-----EEEEecccccCCCC--eEEEEEcH
Confidence 8889999642 344442 389999999987 33344555444 34569999998888 78888763
Q ss_pred CCCcccchhHHHHHHhh-------------hhhccCcchHHHHHHHHHHhhchHH-HHHHHHHHHHHHHHHHHHHhhcCC
Q 014603 272 PNGILQDSGIVDSIKSF-------------LNISSDPATFIQGAVPQILEKTEEE-FFSKITDILRETADICCDRLKEIP 337 (422)
Q Consensus 272 ~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~ 337 (422)
++++++... ....++|+....+++..+|+...+. .++.+.++.+++++.+++.|++.+
T Consensus 215 --------~~l~~~~~~~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~~ 286 (365)
T PLN02452 215 --------DLIGNARPITPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAIDESN 286 (365)
T ss_pred --------HHHhhcccCCCchhhHHHHHhcCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 343333211 1123588888999999999876554 799999999999999999999987
Q ss_pred CCCCC-CCC--CCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHHHH
Q 014603 338 CITCP-KKP--EGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGRMK 412 (422)
Q Consensus 338 ~~~~~-~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~l~ 412 (422)
++... ..+ ...+.+.+.++.. ....++.. .++++|+...+|...- .+ +|+|+- ++.++++++++.++
T Consensus 287 G~y~~~~~~~~rs~~~vsF~~~~~-----~~~~~f~~-~~~~~g~~~~~G~r~~-gg-~R~s~yna~~~~~v~~L~~~m~ 358 (365)
T PLN02452 287 GFYVCPVEKSVRSLMNVPFTLGGS-----ELEAEFVK-EAAKAGMVQLKGHRSV-GG-MRASIYNAMPLAGVEKLVAFMK 358 (365)
T ss_pred CcccCCCChHHhCCeEEEEEcCCc-----hhHHHHHH-HHHHCCCcccCCcccc-Cc-eEEECcCCCCHHHHHHHHHHHH
Confidence 76211 111 2344555556542 12444444 4578899999998652 33 999985 78999999999988
Q ss_pred HHHHH
Q 014603 413 AFYDR 417 (422)
Q Consensus 413 ~~~~~ 417 (422)
++-++
T Consensus 359 ~f~~~ 363 (365)
T PLN02452 359 DFQAK 363 (365)
T ss_pred HHHHh
Confidence 87654
No 342
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.79 E-value=5.8e-17 Score=155.04 Aligned_cols=335 Identities=13% Similarity=0.140 Sum_probs=188.8
Q ss_pred cCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCC-CCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHH
Q 014603 42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSS-TVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT 120 (422)
Q Consensus 42 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~-~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~ 120 (422)
.+|+.+|||..|......+ ..+|.+.+++.+++.... .+.. .....++.+.+++.+ + ..+.++|+++|+
T Consensus 45 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~Ai~~q~~~~~--~~~~~~~~~~~la~~l~~~~----p---~~~~v~f~~sGs 114 (431)
T PRK06209 45 VDGNEYIEYGMGLRAVGLG-HAYPPVVEAVREALQDGC--NFTRPSAIELDAAESFLELI----D---GADMVKFCKNGS 114 (431)
T ss_pred CCCCEEEEccccccchhcC-CCCHHHHHHHHHHHHhCc--CCCCCCHHHHHHHHHHHHhC----C---ccceEEEecCHH
Confidence 3789999999886553333 457899999999998643 2322 111113444444443 1 236899999999
Q ss_pred HHHHHHHHHhcC-CC-CEEEec-CCCccchHHHHh-----hCCCe--EEEeeccCCCCcccCHHHHHHhhcC--CceEEE
Q 014603 121 QAIEVILTVLAR-PG-ANILLP-RPGFPYYEARAT-----HSHLE--VRHFDLLPAKGWEVDLDAVEALADE--NTVALV 188 (422)
Q Consensus 121 ~a~~~~~~~l~~-~g-d~Vl~~-~~~~~~~~~~~~-----~~g~~--~~~~~~~~~~~~~~d~~~l~~~~~~--~~~~i~ 188 (422)
+|++.+++.... .| .+|+.. ..+|+++..... ..+.. ....... -. .-|++.+++.++. +..+.+
T Consensus 115 eA~e~AlklAr~~tgr~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~--~~-~~d~~~l~~~l~~~~~~~aav 191 (431)
T PRK06209 115 DATSAAVRLARAYTGRDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTVT--FR-YNDIASLEALFEDHPGRIACV 191 (431)
T ss_pred HHHHHHHHHHHHHhCCCeEEEeccCccccccccccccCCCCCCCChhHhccccc--cC-CCCHHHHHHHHHhCCCCEEEE
Confidence 999999885421 23 456555 344433211100 00100 0000000 00 1277888887743 345666
Q ss_pred EeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEE
Q 014603 189 IINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLV 268 (422)
Q Consensus 189 i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~ 268 (422)
++.|. .|...+.+.+++|.++|++||+++|+||++.++.+.+..... .++..++ +.+++|.++ .|+++|+++
T Consensus 192 i~Epv--~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~~~~~~g~~~--~~gv~PD---i~t~gK~lg-gG~p~~av~ 263 (431)
T PRK06209 192 ILEPA--TADEPQDGFLHEVRRLCHENGALFILDEMITGFRWHMRGAQK--LYGIVPD---LSCFGKALG-NGFAVSALA 263 (431)
T ss_pred EEccc--cCCCCCHHHHHHHHHHHHHcCCEEEEEcccccCCcCcchhhH--HhCCCcc---eeeehhhhc-CCcccEEEE
Confidence 77774 244777899999999999999999999999876543211111 1222222 355689964 578899999
Q ss_pred eeCCCCcccchhHHHH--HHh---h----hhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhh----c
Q 014603 269 TSDPNGILQDSGIVDS--IKS---F----LNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLK----E 335 (422)
Q Consensus 269 ~~~~~~~~~~~~~~~~--~~~---~----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~----~ 335 (422)
++ +++++. +.. . ...+.+++++..+++.+.|+...++. ..++++++-+++++.|+ +
T Consensus 264 ~~--------~~i~~~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~~~~---~~~~~~~~g~~l~~~L~~~~~~ 332 (431)
T PRK06209 264 GK--------REYMELGGLEHTDRERVFLLSTTHGAETHALAAAIATMAIYRDED---VIERLHEQGAKLAAGVNEAAAE 332 (431)
T ss_pred EH--------HHHHhhhcccccCCCCceeeccCCCCCHHHHHHHHHHHHHHhccC---HHHHHHHHHHHHHHHHHHHHHh
Confidence 86 356654 211 1 12344667788888888887643222 33444444444444443 3
Q ss_pred CCCCCCCCCCCCceEEEEecCcccccCCCCH--HHHHHHHHHhcCeEEecCCCCCCCCeEEEEeccChHHHHHHHHHHHH
Q 014603 336 IPCITCPKKPEGSMFVMVKLNYSLLEGINSD--MEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALEDGLGRMKA 413 (422)
Q Consensus 336 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~l~~~~~~l~~ 413 (422)
++ +.......+.......+........... ..+...+ .++|+.+.| ++|+..+++++|+++++++.+
T Consensus 333 ~~-~~~~vr~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gi~~p~---------l~is~~ht~~dId~~l~~l~~ 401 (431)
T PRK06209 333 HG-LQDHVRVSGRPCCLTYSTLDGNGQPSQAFRTLFLQET-IRRGVLMPS---------LVVSYAHGDADIERTIDAVHG 401 (431)
T ss_pred CC-CCeEEEeecceEEEEEecCCcccCCcHHHHHHHHHHH-HHCCccccc---------ccccccCCHHHHHHHHHHHHH
Confidence 42 2201111222222111111000000011 1333444 566998732 477766899999999999999
Q ss_pred HHHHhc
Q 014603 414 FYDRHA 419 (422)
Q Consensus 414 ~~~~~~ 419 (422)
++++..
T Consensus 402 ~l~~~~ 407 (431)
T PRK06209 402 ALGVYR 407 (431)
T ss_pred HHHHHH
Confidence 998763
No 343
>PRK04311 selenocysteine synthase; Provisional
Probab=99.79 E-value=3.9e-16 Score=148.79 Aligned_cols=320 Identities=16% Similarity=0.113 Sum_probs=194.0
Q ss_pred CCcHHHHHHHHHHhhCCCCCCCCC-----CCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCE
Q 014603 62 RTASVAVDAIVHSVRSARFNCYSS-----TVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGAN 136 (422)
Q Consensus 62 ~~~~~v~~a~~~~~~~~~~~~y~~-----~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~ 136 (422)
+.++++.+++.+.+.......|.- ..-+..+++.++++++ .+..++++++++|+..++.++ .+||+
T Consensus 97 ~l~~~v~eav~~~~~~~~~le~~l~~g~~g~r~~~~e~~lA~l~G--------ae~a~vv~sgtaAl~l~l~~l-~~Gde 167 (464)
T PRK04311 97 LLSEAAIEAVTEAARGYSNLEYDLATGKRGSRDRALAALLCALTG--------AEDALVVNNNAAAVLLALNAL-AAGKE 167 (464)
T ss_pred CCCHHHHHHHHHHHhcccccccchhhcccchHHHHHHHHHHHHhC--------CCeEEEECCHHHHHHHHHHHh-CCCCE
Confidence 467899999998876532112211 1123578888888873 346788888999999988665 78999
Q ss_pred EEecCCCccc------hHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCc--ccccCHHHHHHH
Q 014603 137 ILLPRPGFPY------YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPC--GNVYTYQHLQKI 208 (422)
Q Consensus 137 Vl~~~~~~~~------~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~npt--G~~~~~~~l~~i 208 (422)
|++++.++.. +.......|++++.++... ..+++++++.++++++++++++++|++ |.. ...++++|
T Consensus 168 VIvs~~e~~~~ggs~~i~~~~~~~G~~l~~v~~~~----~t~~~dle~aI~~~TklV~~vh~sN~~i~G~~-~~~dl~eI 242 (464)
T PRK04311 168 VIVSRGELVEIGGAFRIPDVMRQAGARLVEVGTTN----RTHLRDYEQAINENTALLLKVHTSNYRIEGFT-KEVSLAEL 242 (464)
T ss_pred EEEcchhhhhcCcchhhHHHHHHCCcEEEEECCCC----CCCHHHHHHhcCccCeEEEEEcCCCccccccC-CcCCHHHH
Confidence 9999875541 2335567898888886532 257889999999999999999999983 422 11468999
Q ss_pred HHHHHHcCcEEEEcccccccc----cCCCCCCCcc---ccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhH
Q 014603 209 AETAKKLGIMVIADEVYDHLA----FGNTPFVPMG---VFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGI 281 (422)
Q Consensus 209 ~~~~~~~~~~li~D~~~~~~~----~~~~~~~~~~---~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~ 281 (422)
+++|+++|+++|+|..++.+. +.-.....+. ..+.| ++++|.+|.+++| ..|+++++ +++
T Consensus 243 ~~lak~~gi~vivD~gsG~l~~~~~~gl~~~p~~~~~l~~GaD---iv~fSg~K~LgGp--~~G~i~g~--------~~l 309 (464)
T PRK04311 243 AALGKEHGLPVVYDLGSGSLVDLSQYGLPDEPTVQELLAAGVD---LVTFSGDKLLGGP--QAGIIVGK--------KEL 309 (464)
T ss_pred HHHHHHcCCeEEEECCCcccccchhccCCCCCchhhHHhcCCc---EEEecCcccccCC--ceEEEEEc--------HHH
Confidence 999999999999999654331 1100011111 13333 8999999997666 37888875 467
Q ss_pred HHHHHhhhh-hccCcchHHHHHHHHHHhhch---H--------HHHHHHHHHHHHHHHHHHHHhhcCC--CC--CCCC--
Q 014603 282 VDSIKSFLN-ISSDPATFIQGAVPQILEKTE---E--------EFFSKITDILRETADICCDRLKEIP--CI--TCPK-- 343 (422)
Q Consensus 282 ~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~---~--------~~~~~~~~~~~~~~~~l~~~L~~~~--~~--~~~~-- 343 (422)
+++++.... ...........+..+.|.... + ..+....+++.++.+.+.+.|+.++ ++ .+..
T Consensus 310 i~~l~~~~~~r~lr~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~ 389 (464)
T PRK04311 310 IARLKKHPLKRALRVDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKAALGAAFAVEVVPSF 389 (464)
T ss_pred HHHHhhchhHHHHhcchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhccCCCeeEEEEEcc
Confidence 776663221 111222333333333443211 1 1123334667778888888887753 22 1110
Q ss_pred -CCCCce-------EEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec-cChHHHHHHHHHHHHH
Q 014603 344 -KPEGSM-------FVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA-VEPSALEDGLGRMKAF 414 (422)
Q Consensus 344 -~~~~g~-------~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~-~~~~~l~~~~~~l~~~ 414 (422)
...+|. .+-+.+... ..+..++..+| ++....|..- -.++.+.+.+- ..++|++.++++|.++
T Consensus 390 ~~~gggs~p~~~~~~~~v~~~~~----~~~~~~l~~~l-r~~~~~i~~r---~~~~~~~ld~r~~~~~~~~~~~~~~~~~ 461 (464)
T PRK04311 390 SQVGGGSLPVDRLPSAAVTLTPK----DRSLEALAARL-RLLPPPVIGR---IEDGRLLLDLRTLEEEDEERLAAALLEA 461 (464)
T ss_pred CccCCCCCcCCCCCeEEEEEeCC----CCCHHHHHHHH-hcCCCCEEEE---EECCEEEEEeCcCCHHHHHHHHHHHHHH
Confidence 001111 111222211 12455555544 5544333221 12566777775 6788999999998887
Q ss_pred HH
Q 014603 415 YD 416 (422)
Q Consensus 415 ~~ 416 (422)
+.
T Consensus 462 ~~ 463 (464)
T PRK04311 462 LN 463 (464)
T ss_pred hh
Confidence 53
No 344
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=99.79 E-value=1.8e-16 Score=159.67 Aligned_cols=347 Identities=13% Similarity=0.097 Sum_probs=211.5
Q ss_pred CceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHH
Q 014603 46 PLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEV 125 (422)
Q Consensus 46 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~ 125 (422)
.++|+..+.-....++..+|++.+|+.+++.+... +.......+....+|+.|.+..+ .-..+.|+|+++|++|++.
T Consensus 366 ~ylD~~sg~w~~~lG~h~~p~I~~Ai~~Qa~rl~h--v~~~~~~hepa~~LAe~L~~~~~-~~~l~rVffs~sGSeAvE~ 442 (817)
T PLN02974 366 QQFDACASWWTQGPDPTLQPELARAVAYAAGRYGH--VMFPENVHEPALRAAELLLGGPG-KGWASRVFFSDNGSTAIEV 442 (817)
T ss_pred eEEEcchhHHHhCCCcCCCHHHHHHHHHHHhhCCc--cccCccCCHHHHHHHHHHHhccC-CCCCCEEEECCchHHHHHH
Confidence 67888777533222223589999999999976322 21111223455556666654211 0113689999999999999
Q ss_pred HHHHhc-------C--------------CCCEEEecCCCccchHHHHhhCCCe---------E------EEe--ecc---
Q 014603 126 ILTVLA-------R--------------PGANILLPRPGFPYYEARATHSHLE---------V------RHF--DLL--- 164 (422)
Q Consensus 126 ~~~~l~-------~--------------~gd~Vl~~~~~~~~~~~~~~~~g~~---------~------~~~--~~~--- 164 (422)
+++... . ...+|+....+||+....+...+.. . ..+ |..
T Consensus 443 AlKmA~r~y~~~~G~~~~~~~~~~~~~~~r~kIIa~~gsYHG~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~~~~~ 522 (817)
T PLN02974 443 ALKMAFRKFIVDHGFLENSGNEKRGGDLIELKVLALDGSYHGDTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTVGMR 522 (817)
T ss_pred HHHHHHHHHHHhcCCCcccccccccccCCCCEEEEECCCcCCCCHHHHhhCCchhhhcccccccccCCCcccCCCccccc
Confidence 887542 1 1246999999998864433332210 0 001 000
Q ss_pred --------CCC--C--------cc-----cC------------HHHHHHhhc-------CCceEEEEeCC--CCCcccc-
Q 014603 165 --------PAK--G--------WE-----VD------------LDAVEALAD-------ENTVALVIINP--GNPCGNV- 199 (422)
Q Consensus 165 --------~~~--~--------~~-----~d------------~~~l~~~~~-------~~~~~i~i~~p--~nptG~~- 199 (422)
+.. . |. ++ .+.+++.+. .+..+.+|..| +...|.+
T Consensus 523 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~f~~~r~~~~~~~~~~~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~ 602 (817)
T PLN02974 523 NGRWNISLPEGFSSGLEGEETTWESRDEVFDKTRDSTPLAKAYRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLL 602 (817)
T ss_pred cccccccCCccccccccccccccccccccccccccchhhhHHHHHHHHHHHHhhccccCCCCEEEEEEeccccCCCCccc
Confidence 000 0 00 00 134555553 24567777888 4666775
Q ss_pred cCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCC-ceeEEEEeeCCCCcccc
Q 014603 200 YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQD 278 (422)
Q Consensus 200 ~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G-~r~G~~~~~~~~~~~~~ 278 (422)
++++.++++.++|++||+++|.||++.++.++|..+ ....++..+++++ ++|.+ ..| +++|.++++
T Consensus 603 ~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~f-a~e~~gv~PDIi~---~gKgL-tgG~~Plaa~l~~-------- 669 (817)
T PLN02974 603 IDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVES-AWELLGCKPDIAC---YAKLL-TGGLVPLAATLAT-------- 669 (817)
T ss_pred CCHHHHHHHHHHHHHhCCEEEEeecccCCCcccchh-hHHhcCCCCCEEe---ecccc-cCCCCccEEEEEc--------
Confidence 578889999999999999999999999998888643 2334444444444 46994 678 699999986
Q ss_pred hhHHHHHHh-------hhhhccCcchHHHHHHHHHHhhchH-HHHHHHHHHHHHHHHHHHH----HhhcCCCCCCCCCCC
Q 014603 279 SGIVDSIKS-------FLNISSDPATFIQGAVPQILEKTEE-EFFSKITDILRETADICCD----RLKEIPCITCPKKPE 346 (422)
Q Consensus 279 ~~~~~~~~~-------~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~----~L~~~~~~~~~~~~~ 346 (422)
+++.+.+.. .+..+.+.++++++++.+.|+...+ +...+..+..++..+.+.+ .|+++|.+. - ...
T Consensus 670 ~~I~~~f~~~~~~~~~~hg~Ty~gnpl~cAaala~L~~~~~~~~~~~l~~~~~~l~~~l~~~l~~~l~~~p~V~-~-VRg 747 (817)
T PLN02974 670 EEVFEAFRGPSKLDALLHGHSYTAHPMGCAAAAKALQWYKDPSTNPNLIPPGSRLRELWDEELVRAISSLPNVE-R-VVS 747 (817)
T ss_pred HHHHHhhccccccCCcccCCCCCcCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCee-E-EEe
Confidence 467777642 1234568899999999999887543 2333344444444444443 444555443 1 223
Q ss_pred CceEEEEecCcccc-cCC--CCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHHHHHHH
Q 014603 347 GSMFVMVKLNYSLL-EGI--NSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGRMKAFY 415 (422)
Q Consensus 347 ~g~~~~~~~~~~~~-~~~--~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~l~~~~ 415 (422)
-|.++.+.+..... .+. .....+...+..++|+.++|. .+.+|+.+. ++++++++++++|.+.+
T Consensus 748 ~Gl~~~iel~~~~~~~~~~~~~a~~v~~~~~~~~Gl~~r~~-----Gnvi~l~pP~~i~~e~l~~~~~~l~~~~ 816 (817)
T PLN02974 748 LGTVLALELDAEGSGSGYSSLYARSVVRRLRREDGIYARPL-----GNVVYLMCGPTTSPETCTRLLRKVYRRL 816 (817)
T ss_pred eeeEEEEEEecCCcccccchHHHHHHHHHHHHhCCEEEEec-----CCEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 36677777743210 011 012334444432789999884 267888765 78999999999998865
No 345
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.79 E-value=1e-17 Score=140.27 Aligned_cols=166 Identities=20% Similarity=0.141 Sum_probs=128.0
Q ss_pred CHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchH-HHHhhCCCeEEEeeccCCC
Q 014603 89 ILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYE-ARATHSHLEVRHFDLLPAK 167 (422)
Q Consensus 89 ~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~ 167 (422)
+.++++.++++++ .+.+++++++|+++|+..++.++..++++|+++.++|++.. ..+...|.+++.++.+...
T Consensus 2 ~~~~~~~l~~~~~------~~~~~~~~~~~~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 75 (170)
T cd01494 2 LEELEEKLARLLQ------PGNDKAVFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYWVAAELAGAKPVPVPVDDAG 75 (170)
T ss_pred HHHHHHHHHHHcC------CCCCcEEEeCCcHHHHHHHHHHhCCCCCEEEEeecccceehhhHHHhcCCEEEEeccCCCC
Confidence 4688999999983 46778999999999999999999888999999999999887 7888889999988876543
Q ss_pred CcccCHHHHHHh-hcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCC
Q 014603 168 GWEVDLDAVEAL-ADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP 246 (422)
Q Consensus 168 ~~~~d~~~l~~~-~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~ 246 (422)
....+.+.+++. ..++++++++++++|++|...+. ++|.++|+++|+++|+|++|..+...... ......+ .
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~~---~~l~~~~~~~~~~li~D~a~~~~~~~~~~-~~~~~~~---~ 148 (170)
T cd01494 76 YGGLDVAILEELKAKPNVALIVITPNTTSGGVLVPL---KEIRKIAKEYGILLLVDAASAGGASPAPG-VLIPEGG---A 148 (170)
T ss_pred ccchhhhhhhhccccCceEEEEEecCcCCCCeEcCH---HHHHHHHHHcCCEEEEecccccccccccc-ccccccc---C
Confidence 333333355443 35578888999999999998654 78888899999999999999876553211 1111122 2
Q ss_pred eEEEecCccccCCCCceeEEEEe
Q 014603 247 VLTLGSISKRWIVPGWRLGWLVT 269 (422)
Q Consensus 247 ~i~i~s~sK~~~~~G~r~G~~~~ 269 (422)
.+++.|++|.++. .++|++++
T Consensus 149 d~~~~s~~K~~~~--~~~G~l~~ 169 (170)
T cd01494 149 DVVTFSLHKNLGG--EGGGVVIV 169 (170)
T ss_pred CEEEEEcccccCC--CceEEEEe
Confidence 3888999999765 56899876
No 346
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.78 E-value=8.1e-17 Score=148.52 Aligned_cols=339 Identities=17% Similarity=0.130 Sum_probs=195.9
Q ss_pred CCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCC------CCCCCHHHHHHHHHHHhhcCCCCCCCCC--EE-E
Q 014603 45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYS------STVGILPARRAIADYLNRDLPYKLSPDD--VY-L 115 (422)
Q Consensus 45 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~------~~~g~~~lr~~ia~~l~~~~~~~~~~~~--i~-~ 115 (422)
...|+|--.. | .++|.+++++...+.+.....|+ -.....++++...+...+.++ .++++ +- =
T Consensus 20 ~~~l~LiaSE-----N-~~Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~--~~~~~w~anvq 91 (399)
T PF00464_consen 20 RSTLNLIASE-----N-YMSPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFG--AEPKEWYANVQ 91 (399)
T ss_dssp HHSEE-CTT-----------HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT---STTTEEEE--
T ss_pred hcCccccCcc-----c-ccCHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhC--CCcccceEEee
Confidence 4557774433 2 35678888888777654333332 223344555555555555443 33332 22 2
Q ss_pred ecCHHHHHHHHHHHhcCCCCEEEecCCCccchHH-----HH-----hhCCCeEEEeeccCCCCcccCHHHHHHhhcC-Cc
Q 014603 116 TLGCTQAIEVILTVLARPGANILLPRPGFPYYEA-----RA-----THSHLEVRHFDLLPAKGWEVDLDAVEALADE-NT 184 (422)
Q Consensus 116 ~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~-----~~-----~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~ 184 (422)
..||+.|+.+++.+|++|||+|+..++.+.+... .. .-...+.+.++++++ ...+|.+++++.+.+ ++
T Consensus 92 p~SGs~An~av~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~-~~~ID~d~l~~~a~~~kP 170 (399)
T PF00464_consen 92 PHSGSQANLAVYMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPD-TGLIDYDELEKLAKEHKP 170 (399)
T ss_dssp -SSHHHHHHHHHHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TT-TSSB-HHHHHHHHHHH--
T ss_pred cCCchHHHHHHHHHHHhhcCcEEecChhhcccccccccccccccccccceEEEEeeeeecC-CCeECHHHHHHHHhhcCC
Confidence 4678889999999999999999998877644321 11 112356778888764 567999999997754 66
Q ss_pred eEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEccccc-ccccCCCCCCCccccCCCCCeEEEecCccccCCCCce
Q 014603 185 VALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYD-HLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWR 263 (422)
Q Consensus 185 ~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~-~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r 263 (422)
++|++.....|- .-+++++.++|++.|.+|++|.+|. ++.-+|..+.++.. .| ++.+|.+|+| +|.|
T Consensus 171 klIi~G~S~y~~-----~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~~~--AD---vvt~sThKtl--~GPr 238 (399)
T PF00464_consen 171 KLIICGASSYPR-----PIDFKRFREIADEVGAYLMADISHIAGLIAGGLFPNPFPY--AD---VVTGSTHKTL--RGPR 238 (399)
T ss_dssp SEEEEE-SSTSS--------HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GCCT--SS---EEEEESSGGG---SSS
T ss_pred CEEEECchhccC-----ccCHHHHHHHHHhcCcEEEecccccccceehheecCcccc--ce---EEEeeccccc--cccC
Confidence 766654433322 2468999999999999999999986 34445555555543 22 8899999995 7888
Q ss_pred eEEEEeeC------CCCcccchhHHHHHHhhhhh--ccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhc
Q 014603 264 LGWLVTSD------PNGILQDSGIVDSIKSFLNI--SSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKE 335 (422)
Q Consensus 264 ~G~~~~~~------~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 335 (422)
.|.++++. +..-...+++.+++...... .+++.....++...+|.+.....+++..+++-++.+.|.+.|.+
T Consensus 239 ggiI~~~~~~~~~~~~~~~~~~~l~~~I~~avfP~~qg~~h~~~iaalAval~ea~~~~fk~Ya~qVv~NAk~La~~L~~ 318 (399)
T PF00464_consen 239 GGIILTNKGSKNVDKKGKEIDEELAEKIDSAVFPGLQGGPHMHRIAALAVALKEALSPEFKEYAKQVVKNAKALAEALQE 318 (399)
T ss_dssp -EEEEES-SEEEE-TTS-EEEHHHHHHHHHHHTTTT-SS--HHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEcCCccccCCcccccHHHHHHHhccccCCCcccCcchhHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHhh
Confidence 89999861 00000015678888776543 23444445555555666533445678889999999999999999
Q ss_pred CCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEec----CCCC-CCCCeEEEEec------cChHHH
Q 014603 336 IPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLP----GITV-GLKDWLRITFA------VEPSAL 404 (422)
Q Consensus 336 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~----g~~~-~~~~~iRis~~------~~~~~l 404 (422)
. |+.++........+|+.+.... -+...+...|++.||.+.. +..- .....+||+.. ..++++
T Consensus 319 ~-G~~v~~ggTd~H~vlvd~~~~~-----~~g~~a~~~Le~~gI~vnkn~iP~d~~~~~~sGlRlGT~~lT~rG~~e~dm 392 (399)
T PF00464_consen 319 R-GFKVVTGGTDNHQVLVDLRSFG-----IDGKEAEKALEEAGIIVNKNTIPGDRSPFVPSGLRLGTPALTRRGMKEEDM 392 (399)
T ss_dssp T-T-EEGGGS-SSSEEEEEGGGGT-----S-HHHHHHHHHHTTEE-EEE--TTTSTTTT-SEEEEESHHHHHTT--HHHH
T ss_pred C-CcEEEECCCCCCeEEEEecccc-----cchHHHHHHHHhcCeeecccccCCCCCCCCCCEEEECCHHHHhCCCCHHHH
Confidence 8 7775533444567788875421 1334456677889999864 3311 11468999985 345677
Q ss_pred HHHHHH
Q 014603 405 EDGLGR 410 (422)
Q Consensus 405 ~~~~~~ 410 (422)
.++.+.
T Consensus 393 ~~iA~~ 398 (399)
T PF00464_consen 393 KEIAEL 398 (399)
T ss_dssp HHHHHH
T ss_pred HHHHhh
Confidence 666554
No 347
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.76 E-value=6.4e-16 Score=146.79 Aligned_cols=281 Identities=18% Similarity=0.152 Sum_probs=196.1
Q ss_pred CCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcC-----C---
Q 014603 62 RTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLAR-----P--- 133 (422)
Q Consensus 62 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~-----~--- 133 (422)
.+++...+.+...+..... .....++..++++.+..++.+.++.+ ....=.+|+|+|+|+..++.+... .
T Consensus 73 ~~~~~a~~~~~~~~~~nl~-d~~~~p~a~~~E~~~v~~l~~l~~~~-~~~~G~~t~GgTean~lal~aar~~~~~~~~~~ 150 (460)
T COG0076 73 RVPPVAAELLVSALNKNLG-DPDESPAAAELEERVVNMLSDLLGAP-EEASGTFTSGGTEANLLALLAARERWRKRALAE 150 (460)
T ss_pred CCHHHHHHHHHHHHhhcCC-CcccChhHHHHHHHHHHHHHHHhCCC-CCCceEEEcChHHHHHHHHHHHHHHHHHHhhhc
Confidence 4556777777777765321 22222356799999999999877644 333457899999999877765421 1
Q ss_pred C------CEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceE--EEEeCCCCCcccccCHHHH
Q 014603 134 G------ANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVA--LVIINPGNPCGNVYTYQHL 205 (422)
Q Consensus 134 g------d~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~--i~i~~p~nptG~~~~~~~l 205 (422)
+ .+|+++...|.++...+..+|++.+.++..+. ++.+|++.+++++++.+.. ++-+-++.++|.+ +++
T Consensus 151 ~~~~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v~~~~~-~~~id~~~l~~~i~~~t~~g~vV~~aGtT~~G~i---Ddi 226 (460)
T COG0076 151 SGKPGGKPNIVCSETAHFSFEKAARYLGLGLRRVPTVPT-DYRIDVDALEEAIDENTIGGVVVGTAGTTDTGSI---DDI 226 (460)
T ss_pred ccccCCCCeEEecCcchhHHHHHHHHhCCCceeEEeccC-ccccCHHHHHHHHHhhccCceEEEEecCCCCCcc---CCH
Confidence 1 27999999999999999999999999998875 6789999999999988777 8888889999999 899
Q ss_pred HHHHHHHHHcCcEEEEcccccccccC-CCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHH
Q 014603 206 QKIAETAKKLGIMVIADEVYDHLAFG-NTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDS 284 (422)
Q Consensus 206 ~~i~~~~~~~~~~li~D~~~~~~~~~-~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~ 284 (422)
++|.++|+++++++++|.+++++..- ...... ..+....-.-+..+++|. +..-..+||++.+|++ .+.+.
T Consensus 227 ~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~-~~f~l~~vdSIt~d~HK~-g~aP~~~G~il~rd~e------~l~~~ 298 (460)
T COG0076 227 EELADIAEEYGIWLHVDAAFGGFLLPFLEPDGR-WDFGLEGVDSITVDGHKY-GLAPIGCGVVLFRDEE------ALRRI 298 (460)
T ss_pred HHHHHHHHHcCCcEEEEccccceeecccCccch-hhcCCCCceEEEECcccc-cCCCCCceEEEEECHH------Hhhhh
Confidence 99999999999999999999875531 111111 011111112555699999 6776789999998742 23333
Q ss_pred HHhhhh---------h--ccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEE
Q 014603 285 IKSFLN---------I--SSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMV 353 (422)
Q Consensus 285 ~~~~~~---------~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~ 353 (422)
+..... . .++.+.....+....|.....+++.++.++..+.++++.+.|++.+.++++..|. ...+.+
T Consensus 299 ~~~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~p~-l~~V~f 377 (460)
T COG0076 299 LIFADYYLPGGGIPNFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEELEKLGDFELVNEPE-LPIVAF 377 (460)
T ss_pred hhcccccCCCCCcCceeEeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhCCCcEeecCCc-cceEEE
Confidence 321110 1 1111111223333344444467888899999999999999999997788665564 445566
Q ss_pred ecCc
Q 014603 354 KLNY 357 (422)
Q Consensus 354 ~~~~ 357 (422)
+.+.
T Consensus 378 r~~~ 381 (460)
T COG0076 378 RLKD 381 (460)
T ss_pred EcCC
Confidence 6643
No 348
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.76 E-value=7.9e-16 Score=142.77 Aligned_cols=315 Identities=16% Similarity=0.059 Sum_probs=194.6
Q ss_pred HHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhc-CCCCEEEecCCCcc
Q 014603 67 AVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLA-RPGANILLPRPGFP 145 (422)
Q Consensus 67 v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~-~~gd~Vl~~~~~~~ 145 (422)
+++++.+.+-.. .++.+ ...++-+.+.+.|.+.++.+.+.+-+++++|||.++++++.+++ ++|++|++.. .|.
T Consensus 19 ~~~~~~~~~~~~--~HRs~--~F~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~~~g~~vLv~g-~FG 93 (374)
T TIGR01365 19 SIEELKNAPLGR--SHRSK--LGKEKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLGCRGVDVLAWE-SFG 93 (374)
T ss_pred hHHHHhhhhccc--CcCCH--HHHHHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCCCCCCeEEEEC-HHH
Confidence 667776654331 12222 22333333333343333322223346779999999999999998 5888998865 342
Q ss_pred -chH-HHHhhCCCe-EEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEc
Q 014603 146 -YYE-ARATHSHLE-VRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIAD 222 (422)
Q Consensus 146 -~~~-~~~~~~g~~-~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D 222 (422)
.+. .+++..|.+ +..+... .+..+++++++. + +.+.+++....||+..|. +++...+ ++.++|+|
T Consensus 94 ~r~~~eia~~~g~~~v~~l~~~--~g~~~~~~~ve~--~---~~v~~vhnETSTGv~npv---~~i~~~~--~~~lliVD 161 (374)
T TIGR01365 94 KGWVTDVTKQLKLPDVRVLEAE--YGKLPDLKKVDF--K---NDVVFTWNGTTSGVRVPN---GDFIPAD--REGLTICD 161 (374)
T ss_pred HHHHHHHHHhcCCCCcEEEcCC--CCCCCCHHHcCC--C---CCEEEecCCCchheeccc---ccccccc--CCCcEEEE
Confidence 234 778888984 6666543 334578888873 1 225688888899999664 4444322 48999999
Q ss_pred ccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHh---------------
Q 014603 223 EVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKS--------------- 287 (422)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~--------------- 287 (422)
.+.+.. ..+..+.. .| +++.|..|.+++|+ .+++++.++ +.+++.+.
T Consensus 162 avSs~g----~~~l~~d~--iD---v~~tgsQK~L~~pp-Gls~v~vs~--------~Al~~~~~~~~y~~~~~~~~~~~ 223 (374)
T TIGR01365 162 ATSAAF----AQDLDYHK--LD---VVTFSWQKVLGGEG-AHGMLILSP--------RAVARLESYTPAWPLPKIFRLTK 223 (374)
T ss_pred ccchhc----CCCCChhH--Cc---EEEEechhccCCCC-ceEEEEECH--------HHHHHHhhcCCCCCChhhhcccc
Confidence 998863 22233332 22 88889999997643 267777753 23322221
Q ss_pred --------h-hhhccCcchHHHHHHHHHHhhchHH-HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC-CC--CceEEEEe
Q 014603 288 --------F-LNISSDPATFIQGAVPQILEKTEEE-FFSKITDILRETADICCDRLKEIPCITCPKK-PE--GSMFVMVK 354 (422)
Q Consensus 288 --------~-~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~~--~g~~~~~~ 354 (422)
. ..+..+|+....+++..+|+...++ +++.+.++++++++.+++.+++++.+..... +. +.....+.
T Consensus 224 ~~~~~~~~~~~~t~~TP~v~~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l~~~~~~~~~rS~tvt~v~ 303 (374)
T TIGR01365 224 GGKLNKKIFEGSTINTPSMLCVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAKNNWIHFLAETPEIRSNTSVCLK 303 (374)
T ss_pred ccchhhhhhcCCCCCChHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCChhhcCCCeEEEE
Confidence 0 1123356666677777777644443 6999999999999999999999843553321 11 22223344
Q ss_pred cCcccccCCC-C-----HHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHHHHHHHHH
Q 014603 355 LNYSLLEGIN-S-----DMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGRMKAFYDR 417 (422)
Q Consensus 355 ~~~~~~~~~~-~-----~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~l~~~~~~ 417 (422)
++.+...... + ..++ ...++++||.+.+|.....+..+||+.. .+.+++++++..|.=+.++
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~-~~~l~~~gi~i~~G~~~~~~~~fRIg~~G~i~~~di~~l~~~l~~~~~~ 373 (374)
T TIGR01365 304 VVDPAIDALDEDAQADFAKEL-ISTLEKEGVAYDIGSYRDAPSGLRIWCGATVEKSDLECLCPWLDWAFAL 373 (374)
T ss_pred eCCccccccccchhhHHHHHH-HHHHHHCCEEEeccccccCCCceEEecCCcCCHHHHHHHHHHHHHHHhc
Confidence 4332110000 1 2444 4445677999998876554688999985 7899999999998866543
No 349
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.74 E-value=7.7e-15 Score=139.57 Aligned_cols=313 Identities=16% Similarity=0.134 Sum_probs=184.2
Q ss_pred CCcHHHHHHHHHHhhCCCCCCCCC-----CCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCE
Q 014603 62 RTASVAVDAIVHSVRSARFNCYSS-----TVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGAN 136 (422)
Q Consensus 62 ~~~~~v~~a~~~~~~~~~~~~y~~-----~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~ 136 (422)
+.++++.+++.+.+.......|.- ..-+..+++.++++++ .+..+++++++.|+..++.+ +.+||+
T Consensus 92 ~l~~~vieAv~~~~~~y~~l~~~l~~g~~g~r~~~le~~lA~l~g--------ae~alvv~sg~aAi~l~l~~-l~~Gde 162 (454)
T TIGR00474 92 PLAEEAIEAVTDAARGYSNLEYDLETGKRGSRYSHVEGLLCELTG--------AEDALVVNNNAAAVLLALNT-LAKGKE 162 (454)
T ss_pred CCCHHHHHHHHHHHhcccchhccccccccchHHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHH-hCCcCE
Confidence 567999999998886532112211 1124688899999883 23456778888999988865 578999
Q ss_pred EEecCCCccc------hHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCc--cc--ccCHHHHH
Q 014603 137 ILLPRPGFPY------YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPC--GN--VYTYQHLQ 206 (422)
Q Consensus 137 Vl~~~~~~~~------~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~npt--G~--~~~~~~l~ 206 (422)
|++++..|.. +....+..|++++.++.+. ..++++++++++++++++++++++|++ |. . .+++
T Consensus 163 VIvs~~e~v~~ggs~~i~~~~~~~G~~~~~v~~~~----~~~l~dle~aI~~~T~lv~~~h~sN~~~~G~~~~---~dl~ 235 (454)
T TIGR00474 163 VIVSRGELVEIGGSFRIPDVMEQSGAKLVEVGTTN----RTHLKDYEDAITENTALLLKVHTSNYRIVGFTEE---VSIA 235 (454)
T ss_pred EEECCChhhhhcchhhHHHHHHHcCCEEEEeCCCC----CCCHHHHHHhcCcCCEEEEEEccCcccccCCCCC---CCHH
Confidence 9999876521 2345567898888886532 247899999999999999999999985 53 3 3689
Q ss_pred HHHHHHHHcCcEEEEcccccccccCC-----CCC--CCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccch
Q 014603 207 KIAETAKKLGIMVIADEVYDHLAFGN-----TPF--VPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDS 279 (422)
Q Consensus 207 ~i~~~~~~~~~~li~D~~~~~~~~~~-----~~~--~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~ 279 (422)
+|+++|+++|+++++|.+.+.+.-.+ ..+ ......+.| ++++|.+|++++| ..|+++++ +
T Consensus 236 ~I~~la~~~g~~vivD~~sG~l~~~~~~gl~~~p~~~~~~~~GaD---iv~fSg~K~LgGp--~~G~i~g~--------~ 302 (454)
T TIGR00474 236 ELVALGREHGLPVMEDLGSGSLVDLSRYGLPDEPTVQEVIAAGVD---LVTFSGDKLLGGP--QAGIIVGK--------K 302 (454)
T ss_pred HHHHHHHHcCCeEEEECCCcccccchhccCCCCcccccHhHcCCC---EEEecCccccCCC--eEEEEEEC--------H
Confidence 99999999999999998644321100 101 011223333 8899999997666 37888875 3
Q ss_pred hHHHHHHhhhhh-ccCcchHHHHHHHHHHhhc---hH--------HHHHHHHHHHHHHHHHHHHHhhcC--CCCCCCCCC
Q 014603 280 GIVDSIKSFLNI-SSDPATFIQGAVPQILEKT---EE--------EFFSKITDILRETADICCDRLKEI--PCITCPKKP 345 (422)
Q Consensus 280 ~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~---~~--------~~~~~~~~~~~~~~~~l~~~L~~~--~~~~~~~~~ 345 (422)
+++++++..... .........++..+.+... .+ .-+....++++++.+.+.+.|++. +++.+-..+
T Consensus 303 ~~i~~l~~~~l~r~lr~~k~~la~l~~~l~~~~~~~~a~~~~~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~ 382 (454)
T TIGR00474 303 ELIERLKKNPLTRALRVDKLTLAALEATLRLYLDPEKALEKIPTLRMLTQSPEELRARAERLAKRLKAALGPGFELEIVP 382 (454)
T ss_pred HHHHhhhhchhHHHHhhChHHHHHHHHHHHHHhCchhhhhhchHHHHhccCHHHHHHHHHHHHHHHHhhccCCceEEEEE
Confidence 555554432210 0111122222222222211 11 112233356667777788888764 332211011
Q ss_pred -----CCce-------EEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec-cChHHHHHHHHHH
Q 014603 346 -----EGSM-------FVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA-VEPSALEDGLGRM 411 (422)
Q Consensus 346 -----~~g~-------~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~-~~~~~l~~~~~~l 411 (422)
.+|. .+-+.+... + .+..++..+| ++....|..- -.++.+.+.+- ..++|++.++++|
T Consensus 383 ~~~~~ggg~~p~~~l~~~~v~~~~~---~-~~~~~l~~~l-r~~~~~ii~r---~~~~~~~ld~r~~~~~~~~~~~~~~ 453 (454)
T TIGR00474 383 GLSQVGGGSLPDERLPSYAVTLTPD---G-LSAEKLEARL-RELPPPIIGR---IEDDRFLLDLRTLLEDEEELLIEAL 453 (454)
T ss_pred cCCcccCCCCcCCCCCeEEEEEecC---C-CCHHHHHHHH-hcCCCCEEEE---EECCEEEEEeCcCCHHHHHHHHHHh
Confidence 1111 111222211 1 2455555544 6655333321 12566677765 5678888887765
No 350
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.74 E-value=1.4e-14 Score=146.20 Aligned_cols=261 Identities=13% Similarity=0.084 Sum_probs=171.5
Q ss_pred CEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC---CceEEEEeCCCCCcccccCHHH-HHHHHH
Q 014603 135 ANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE---NTVALVIINPGNPCGNVYTYQH-LQKIAE 210 (422)
Q Consensus 135 d~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~---~~~~i~i~~p~nptG~~~~~~~-l~~i~~ 210 (422)
++|+++...|......+...|++++.++.+ .++.+|+++|++.+++ +++++++++|+| +|.. ++ +++|++
T Consensus 579 ~~vlip~saHgtnPasa~~~G~~Vv~V~~d--~~G~iDle~L~~~i~~~~~~taaV~iT~pst-~G~~---e~~I~eI~~ 652 (939)
T TIGR00461 579 NICLIPVSAHGTNPASAAMAGMQVVPVNCD--QDGNIDLVDLKNKAEQHGDELAAVMVTYPST-HGVF---EPTIQHACD 652 (939)
T ss_pred CEEEEEccccCcCHHHHHHCCCEEEEeccC--CCCCcCHHHHHHHHhhcCCceEEEEEEeCCc-Ccee---cccHHHHHH
Confidence 689999999977777888899999999875 3456999999999864 788999999999 7887 45 999999
Q ss_pred HHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccC----CCCceeEEEEeeCCCCcccchhHHHHHH
Q 014603 211 TAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWI----VPGWRLGWLVTSDPNGILQDSGIVDSIK 286 (422)
Q Consensus 211 ~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~----~~G~r~G~~~~~~~~~~~~~~~~~~~~~ 286 (422)
+|+++|.++++|.++..... .......++.| ++++|.+|+|+ ..|..+|.+.+.+. +...+.
T Consensus 653 iah~~G~~v~VDgAq~~al~---~l~~Pg~~GaD---i~~~s~HKtf~~P~G~GGPg~G~i~vr~~--------L~~~lP 718 (939)
T TIGR00461 653 IVHSFGGQVYLDGANMNAQV---GLTSPGDLGAD---VCHLNLHKTFCIPHGGGGPGMGPIGVKSH--------LIPFLP 718 (939)
T ss_pred HHHHcCCEEEEEecChhhCC---CCCCccccCCC---EEEecCCccCCCCCCCCCCCeEEEEEhhh--------chhhcC
Confidence 99999999999999964111 11223445555 88899999765 24566899988632 111111
Q ss_pred h------------hh---hhc--cCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCce
Q 014603 287 S------------FL---NIS--SDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSM 349 (422)
Q Consensus 287 ~------------~~---~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~ 349 (422)
. .. ... ...+......+..+|.....+.+.+..+..-.+.+++.++|++. +.+......+.
T Consensus 719 g~~v~~t~d~~greq~Iga~s~~~~g~a~~~l~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~~--~~~l~~~~~~~ 796 (939)
T TIGR00461 719 KHDVVSMITGIGGSKSIGSVSAAPYGSASILPISWMYIKMMGNEGLPKASVVAILNANYMATRLKDH--YPILFVGTLKH 796 (939)
T ss_pred CCcccccccCCCCccccccccccccCcHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhcc--CcccccCCCCc
Confidence 0 00 000 11222233344444554456788888888888999999999874 34232222222
Q ss_pred E---EEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHHHHHHHHHhc
Q 014603 350 F---VMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGRMKAFYDRHA 419 (422)
Q Consensus 350 ~---~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~l~~~~~~~~ 419 (422)
+ +.++++...........++..+|+ ++|+.... ..|...+.+-|.++ .+.++||++++.+.++.++..
T Consensus 797 ~~hEfv~~~~~~~~~~g~~~~dIakrL~-d~G~hapt-~~~pv~g~lmiepTE~eskeelD~f~~al~~I~~e~~ 869 (939)
T TIGR00461 797 VAHECILDLRPLKAKTGIEAIDVAKRLQ-DYGFHAPT-LSFPVPGTLMVEPTESESLEELDRFCDAMIAIKEEIN 869 (939)
T ss_pred eeEEEEEeccchhhhcCCCHHHHHHHHH-hCCeeccc-cCCccCCeEEEEeeccCCHHHHHHHHHHHHHHHHHHH
Confidence 1 223443211111125677888775 56987543 33434455555555 788999999999988776653
No 351
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.73 E-value=1.1e-14 Score=149.44 Aligned_cols=305 Identities=16% Similarity=0.085 Sum_probs=187.3
Q ss_pred CHHHHHHHHHHHhhcCCCCCCCCCEEEecC-HHHHHHHHHHHh----cCCCC----EEEecCCCccchHHHHhhCCCeEE
Q 014603 89 ILPARRAIADYLNRDLPYKLSPDDVYLTLG-CTQAIEVILTVL----ARPGA----NILLPRPGFPYYEARATHSHLEVR 159 (422)
Q Consensus 89 ~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g-~~~a~~~~~~~l----~~~gd----~Vl~~~~~~~~~~~~~~~~g~~~~ 159 (422)
..++...+.+++.+.+| .+++.+.++ ++++....+.++ .++|+ +|++++..|......+...|++++
T Consensus 540 ~l~~i~e~q~~l~eltG----~d~~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~~~G~~vv 615 (954)
T PRK05367 540 YRELIDQLEAWLAEITG----YDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPASAVMAGMKVV 615 (954)
T ss_pred HHHHHHHHHHHHHHHHC----CCCEEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHHHHHCCCEEE
Confidence 44555555555555444 235766664 444443333222 24554 699999999888888889999999
Q ss_pred EeeccCCCCcccCHHHHHHhhcC---CceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCC
Q 014603 160 HFDLLPAKGWEVDLDAVEALADE---NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFV 236 (422)
Q Consensus 160 ~~~~~~~~~~~~d~~~l~~~~~~---~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~ 236 (422)
.++.+. ++.+|++.|++.+++ ++.++++++|++-.+.. +++++|+++|+++|+++++|.++..... + ..
T Consensus 616 ~v~~d~--~G~iD~~~L~~~i~~~~~~la~V~it~pst~G~~e---~~I~eI~~i~h~~G~~v~VDgA~~~al~-~--l~ 687 (954)
T PRK05367 616 VVACDE--NGNIDLDDLRAKAEEHADNLAAIMITYPSTHGVFE---ETIREICEIVHEHGGQVYLDGANMNAQV-G--LA 687 (954)
T ss_pred EECCCC--CCCcCHHHHHHHHhccCCCeEEEEEEcCCCCeeec---CCHHHHHHHHHHcCCEEEEECcChhhcc-C--CC
Confidence 998753 346899999998865 46677888888753334 4689999999999999999999964211 1 11
Q ss_pred CccccCCCCCeEEEecCccccCC----CCceeEEEEeeCCCCcccchhHHHHHHhhh-------hhccCc--chH----H
Q 014603 237 PMGVFGSIVPVLTLGSISKRWIV----PGWRLGWLVTSDPNGILQDSGIVDSIKSFL-------NISSDP--ATF----I 299 (422)
Q Consensus 237 ~~~~~~~~~~~i~i~s~sK~~~~----~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~--~~~----~ 299 (422)
....++.| +++.|++|+|+. .|..+|.+.+.+. +...+.... ...+.. ++. .
T Consensus 688 ~pg~~GAD---i~~~s~HK~f~~P~G~GGPg~G~l~vr~~--------l~p~lpg~~v~~~~~~~~~g~v~ta~~g~al~ 756 (954)
T PRK05367 688 RPGDIGAD---VSHLNLHKTFCIPHGGGGPGVGPIGVKAH--------LAPFLPGHPVQIAGGETGIGAVSAAPFGSASI 756 (954)
T ss_pred ChhhcCCC---EEEecCcccCCCCcCCCCCceEEEeeccc--------ccccCCCCccCcCCCCCCcCcchhHHHHHHHH
Confidence 22344444 888899999753 3455888877521 222221110 000111 111 2
Q ss_pred HHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCce--EEEEecCcccccCCCCHHHHHHHHHHhc
Q 014603 300 QGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSM--FVMVKLNYSLLEGINSDMEFALKLAKEE 377 (422)
Q Consensus 300 ~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 377 (422)
...+..++.....+.+.+..+..-.+.+++.++|++...+. ...|.+.. -+.+.+.........+..++..+| .++
T Consensus 757 ~~~a~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~L~~~~~~~-~~~~~~~~~~e~i~~~~~~~~~~g~~~~di~krL-~d~ 834 (954)
T PRK05367 757 LPISWMYIRMMGAEGLRQATEVAILNANYIAKRLKDHYPVL-YTGANGRVAHECILDLRPLKESTGITVDDIAKRL-IDY 834 (954)
T ss_pred HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhhcCcc-ccCCCCCcccceEEEeecccccCCCCHHHHHHHH-HHC
Confidence 22233344444467777777777789999999998753333 11221110 112222110000012457777777 677
Q ss_pred CeEEecCCCCCCCCeEEEEec--cChHHHHHHHHHHHHHHHHhc
Q 014603 378 SVIVLPGITVGLKDWLRITFA--VEPSALEDGLGRMKAFYDRHA 419 (422)
Q Consensus 378 gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~l~~~~~~~~ 419 (422)
|+....- .|...+.+||+++ ++++||+++++.++.+..+..
T Consensus 835 G~~~~t~-~~pv~~~l~i~ptE~~s~~elDr~~~al~~i~~e~~ 877 (954)
T PRK05367 835 GFHAPTM-SFPVAGTLMVEPTESESKAELDRFCDAMIAIRAEID 877 (954)
T ss_pred CCeEeec-CCccCCEEEEEeeecCCHHHHHHHHHHHHHHHHHHH
Confidence 9987552 3445788999998 788999999999988877654
No 352
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.73 E-value=8.9e-15 Score=141.61 Aligned_cols=263 Identities=17% Similarity=0.177 Sum_probs=169.2
Q ss_pred HHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCC-C---------C-CCCCEEEecCHHHHHHHHHHHhc----C---
Q 014603 71 IVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPY-K---------L-SPDDVYLTLGCTQAIEVILTVLA----R--- 132 (422)
Q Consensus 71 ~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~-~---------~-~~~~i~~~~g~~~a~~~~~~~l~----~--- 132 (422)
+...++.. ...+...+...++++.+.+|+.+..+. + . +...-++|+|||+|+..++.+.. .
T Consensus 110 l~~~lN~n-~~~~~~spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~ 188 (522)
T TIGR03799 110 LMVALNQN-LVKIETSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADG 188 (522)
T ss_pred HHHHhcCC-cceeecCcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccc
Confidence 44444432 224444556779999999998775421 0 0 11234678999998877665421 1
Q ss_pred -------------------CCCEEEecCCCccchHHHHhhCCC---eEEEeeccCCCCcccCHHHHHHhhc----CCceE
Q 014603 133 -------------------PGANILLPRPGFPYYEARATHSHL---EVRHFDLLPAKGWEVDLDAVEALAD----ENTVA 186 (422)
Q Consensus 133 -------------------~gd~Vl~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~~~----~~~~~ 186 (422)
++..|++++-+|+++...+...|+ +++.+|.+. ++.+|++.|++.++ ++++.
T Consensus 189 ~~~~~~~~gl~~~~~~~~~~~~~v~~S~~~H~S~~kaa~~lglg~~~v~~vp~d~--~g~~d~~~L~~~i~~~~~~g~~~ 266 (522)
T TIGR03799 189 DFKGVAREGLFAALKHYGYDGLAILVSERGHYSLGKAADVLGIGRDNLIAIKTDA--NNRIDVDALRDKCAELAEQNIKP 266 (522)
T ss_pred cccccccccchhhhhhccCCceEEEECCCchHHHHHHHHHcCCCcccEEEEEeCC--CCcCCHHHHHHHHHHHHHCCCCc
Confidence 134688899999999999998888 678888753 45799999999875 35444
Q ss_pred EEEe--CCCCCcccccCHHHHHHHHHHHHHcCcEEEEccccccccc-CCCCCCCccccCCCCCeEEEecCccccCCCCce
Q 014603 187 LVII--NPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAF-GNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWR 263 (422)
Q Consensus 187 i~i~--~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~-~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r 263 (422)
++++ ..++.||.+ +++++|+++|+++|+++++|.+|++... .......+..+... ..+..|.+|++++| ..
T Consensus 267 ~~vvataGtt~tGai---Dpl~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gle~a--DSit~d~HK~l~~P-~g 340 (522)
T TIGR03799 267 LAIVGVAGTTETGNI---DPLDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGIERA--DSVTIDAHKQLYVP-MG 340 (522)
T ss_pred EEEEEEecCcCCCCc---CCHHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCchhC--CEEEEChhhcCCcC-cc
Confidence 4444 557789999 7789999999999999999999986321 11000012222111 26777999974332 44
Q ss_pred eEEEEeeCCCCcccchhHHHHHHhh---h-----------hhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHH
Q 014603 264 LGWLVTSDPNGILQDSGIVDSIKSF---L-----------NISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADIC 329 (422)
Q Consensus 264 ~G~~~~~~~~~~~~~~~~~~~~~~~---~-----------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l 329 (422)
+|+++.+++ .+.+.+... . ...++-+.. ...+..+|+......++++.++..++++++
T Consensus 341 ~G~llvr~~-------~~~~~~~~~~~Yl~~~~~~d~~~~~legsR~~~-al~lw~aL~~lG~~G~~~ii~~~~~la~~l 412 (522)
T TIGR03799 341 AGMVLFKDP-------ALMSAIEHHAEYILRKGSKDLGSHTLEGSRPGM-AMLVYAGLHIIGRKGYELLIDQSIEKAKYF 412 (522)
T ss_pred cEEEEEeCH-------HHHHHhccCcchhcCCCCCccccceeecCcchH-HHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 899988753 233333221 0 011111111 123444455545678999999999999999
Q ss_pred HHHhhcCCCCCCCCCCCCceE
Q 014603 330 CDRLKEIPCITCPKKPEGSMF 350 (422)
Q Consensus 330 ~~~L~~~~~~~~~~~~~~g~~ 350 (422)
.+.|++.|+++++..|.-+..
T Consensus 413 ~~~L~~~~~~el~~~p~l~iv 433 (522)
T TIGR03799 413 ADLIQQQPDFELVTEPELCLL 433 (522)
T ss_pred HHHHhhCCCeEEecCCCccEE
Confidence 999999999986655554433
No 353
>PRK15029 arginine decarboxylase; Provisional
Probab=99.73 E-value=8.2e-15 Score=145.65 Aligned_cols=237 Identities=11% Similarity=0.045 Sum_probs=153.3
Q ss_pred CCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEee
Q 014603 83 YSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFD 162 (422)
Q Consensus 83 y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~ 162 (422)
+.|...+.+.++..|+.++ .....++++|+|.++.+++.+++++||+|+++.+||.+........|+.++++.
T Consensus 201 ~~p~G~I~eAq~~aA~~fg-------A~~t~FlvNGST~gn~a~i~a~~~~gd~Vlv~RN~HKSv~~al~L~ga~Pvyl~ 273 (755)
T PRK15029 201 LDHTGAFGESEKYAARVFG-------ADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLILTGAKPVYMV 273 (755)
T ss_pred CCCCcHHHHHHHHHHHHhC-------CCcEEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEec
Confidence 3445557788888888884 235678899999999999999999999999999999999999999999998885
Q ss_pred ccCCC-C--cccC-----HHHHHHhhcC--Cce--------EEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEccc
Q 014603 163 LLPAK-G--WEVD-----LDAVEALADE--NTV--------ALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEV 224 (422)
Q Consensus 163 ~~~~~-~--~~~d-----~~~l~~~~~~--~~~--------~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~ 224 (422)
-.... + ..++ ++.+++++.. ..+ ++++++|+. -|+++ ++++|+++|+++++.|++|||
T Consensus 274 P~~~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY-~Gv~~---di~~I~~~~h~~~~~llvDEA 349 (755)
T PRK15029 274 PSRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTY-DGVCY---NAKEAQDLLEKTSDRLHFDEA 349 (755)
T ss_pred ccccccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCC-cceee---CHHHHHHHHHhcCCeEEEECc
Confidence 32211 1 1234 8888887743 223 889999987 78884 789999999999999999999
Q ss_pred cccc-ccCCCCCCCcccc-----C-CCCCeEEEecCccccCCCCceeEE-EEeeCCCCcccchhHHHHHHhhhhh--ccC
Q 014603 225 YDHL-AFGNTPFVPMGVF-----G-SIVPVLTLGSISKRWIVPGWRLGW-LVTSDPNGILQDSGIVDSIKSFLNI--SSD 294 (422)
Q Consensus 225 ~~~~-~~~~~~~~~~~~~-----~-~~~~~i~i~s~sK~~~~~G~r~G~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 294 (422)
|+.. .|... +.....+ . ....++++.|.+|++ +++..|. +...+.....+ .++++..... +++
T Consensus 350 hGah~~F~~~-~p~~sa~~~~~~~~~Gad~~vvqStHKtL--~alTQaS~LHv~~~~~~id----~~r~~~~l~~~qSTS 422 (755)
T PRK15029 350 WYGYARFNPI-YADHYAMRGEPGDHNGPTVFATHSTHKLL--NALSQASYIHVREGRGAIN----FSRFNQAYMMHATTS 422 (755)
T ss_pred cccccccCcc-ccccccccccccccCCCceEEEEchhhcc--cchhhhhhheeCCCccccC----HHHHHHHHHHHcCCC
Confidence 9753 33321 1111222 1 112359999999994 5665555 44433211111 2445544432 346
Q ss_pred cchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 014603 295 PATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIP 337 (422)
Q Consensus 295 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 337 (422)
|+.+.++.+..+........-.+..++..+....+++.+.+++
T Consensus 423 PSY~LmASLD~ar~~m~~~~G~~l~~~~i~~~~~~r~~l~~~~ 465 (755)
T PRK15029 423 PLYAICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLY 465 (755)
T ss_pred cHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhcc
Confidence 6666555544443322111223334444455555555555543
No 354
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.73 E-value=1.5e-14 Score=132.79 Aligned_cols=323 Identities=16% Similarity=0.121 Sum_probs=204.7
Q ss_pred ceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCC--------CCCCCC--CCCCHHHHHHHHHHHhhcCCCCCCCCCEEEe
Q 014603 47 LIPLGHGDPSAFPSFRTASVAVDAIVHSVRSAR--------FNCYSS--TVGILPARRAIADYLNRDLPYKLSPDDVYLT 116 (422)
Q Consensus 47 ~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~--------~~~y~~--~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~ 116 (422)
..+|+-|. -..|++|.+++.+.+.+-. ..+..+ ...+.+.++.+.+++ +.+.+.+-+++.
T Consensus 5 ~~nF~aGP------a~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~~F~~i~~~~~~~Lr~Ll----~~P~~y~Vlfl~ 74 (364)
T PRK12462 5 QLNFSGGP------GALPDTVLEQVRQAVVELPETGLSVLGMSHRSSWFSSLLAQAEADLRDLL----GIPDEYGVVFLQ 74 (364)
T ss_pred cceecCCC------cCCCHHHHHHHHHHHhcccccCccccccccccHHHHHHHHHHHHHHHHHh----CCCCCCeEEEEe
Confidence 56787775 2456888888887765411 111111 112334444444444 333333344667
Q ss_pred cCHHHHHHHHHHHhcCCCCEEE-ecCCCccc--hHHHHhhCCCeEEEeeccCCCC--cccCHHHHHHhhcCCceEEEEeC
Q 014603 117 LGCTQAIEVILTVLARPGANIL-LPRPGFPY--YEARATHSHLEVRHFDLLPAKG--WEVDLDAVEALADENTVALVIIN 191 (422)
Q Consensus 117 ~g~~~a~~~~~~~l~~~gd~Vl-~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~--~~~d~~~l~~~~~~~~~~i~i~~ 191 (422)
.|||.+++++...++.+||+++ +...++++ +...++.+| ++..+......+ ..++++.+ .++++.+.+.+|+
T Consensus 75 GggT~~~ea~~~Nll~~g~~~~~~~~tG~fg~r~~~ea~~~g-~v~~~~~~~~~~~~~~p~~~~~--~~~~d~~~v~~t~ 151 (364)
T PRK12462 75 GGSSLQFSMIPMNFSRPGAAAPEYVTTGYWSRKAIGEASRVA-AMRVVWDGAASGYRTLPSLAEL--DWDARAPFRHYVS 151 (364)
T ss_pred ccHHHHHHHHHHHcCCCCCcEEEEEeCCHHHHHHHHHHHhcC-CceEecCcCCCCCCcCCCHHHh--ccCCCCcEEEEcc
Confidence 7799999999999999999665 44455543 355666666 444433211111 23455554 2344567777888
Q ss_pred CCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeC
Q 014603 192 PGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD 271 (422)
Q Consensus 192 p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~ 271 (422)
-...+|+..+ ++.+.++.++|+|.+.+.+. .+.++..+ .+++.|..|.+|.|| ++.++.++
T Consensus 152 NETstGv~~~--------~~~~~~~~llvvD~sS~~~s----~pid~~~~-----dvi~agsQKnlgP~G--ltvvivs~ 212 (364)
T PRK12462 152 NETVEGLQFP--------DAAGLPDSPLIADMSSDFMS----RPFDVEAY-----GMVYAHAQKNLGPAG--VTVAIIRR 212 (364)
T ss_pred CCCCceEecC--------cccccCCCeEEEEcCchhhC----CCCChHHc-----cEEEeeccccCCCCc--eEEEEECH
Confidence 8889999875 22223689999999987632 23344444 277888999999888 56777653
Q ss_pred CCCcccchhHHHHHHh-------------hhhhccCcchHHHHHHHHHHhhchHH--HHHHHHHHHHHHHHHHHHHhhcC
Q 014603 272 PNGILQDSGIVDSIKS-------------FLNISSDPATFIQGAVPQILEKTEEE--FFSKITDILRETADICCDRLKEI 336 (422)
Q Consensus 272 ~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~a~~~~l~~~~~~--~~~~~~~~~~~~~~~l~~~L~~~ 336 (422)
+.+++... ......+|+....+++..+|+...++ +++.+.++.++.++.+++.+++.
T Consensus 213 --------~al~~~~~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~id~~ 284 (364)
T PRK12462 213 --------ALLERVPDTLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATLDAL 284 (364)
T ss_pred --------HHHhhccccCCchhhHHHHHhcCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhC
Confidence 23322221 11233488889999999998876555 89999999999999999999998
Q ss_pred CCCCC-CCCC--CCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHHH
Q 014603 337 PCITC-PKKP--EGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGRM 411 (422)
Q Consensus 337 ~~~~~-~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~l 411 (422)
+++.. ...+ .+-+-+.++++... ...++.. .+++.|+....|+.- -+.+|+|+- ++.+.++++++-+
T Consensus 285 ~~~~~~~~~~~~RS~mnv~f~~~~~~-----l~~~f~~-~a~~~gl~~lkGhr~--vgg~Ras~yna~~~e~v~~L~~fm 356 (364)
T PRK12462 285 NEVIDCHAHRAARSTMNVAFRFRQPR-----LDTLFKE-QSTEAGFCGLSGHRS--IGGIRASLYNAVSEQAVSRLCAFL 356 (364)
T ss_pred CCcccCCCChhhcCcceEEEEcCCHH-----HHHHHHH-HHHHCCCccccCCcc--cCceEEEcCCCCCHHHHHHHHHHH
Confidence 65431 2222 22344445554321 2334444 457889998777643 466999996 7888998888887
Q ss_pred HHHHHH
Q 014603 412 KAFYDR 417 (422)
Q Consensus 412 ~~~~~~ 417 (422)
+++-++
T Consensus 357 ~~f~~~ 362 (364)
T PRK12462 357 KDFAIR 362 (364)
T ss_pred HHHHHh
Confidence 776554
No 355
>PLN02263 serine decarboxylase
Probab=99.72 E-value=1.1e-13 Score=130.46 Aligned_cols=346 Identities=16% Similarity=0.024 Sum_probs=216.4
Q ss_pred HHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhC-CCCCCCCCC-CCCHHHHHHHHHHHhhcCC
Q 014603 28 VRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRS-ARFNCYSST-VGILPARRAIADYLNRDLP 105 (422)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~-~~~~~y~~~-~g~~~lr~~ia~~l~~~~~ 105 (422)
...++..+.+.+.+. ....|++ |.. .++. +..+.+.+.-.+.+ +....+++. -...++++.+.+|+.+.+|
T Consensus 75 ~~~~l~~~~~~~~~~---~~~~~gY--p~n-~~~d-~s~l~~~l~~~~nN~Gdp~~~s~~~~~s~~~E~~Vi~wla~L~g 147 (470)
T PLN02263 75 MASVLARYRKTLVER---TKHHLGY--PYN-LDFD-YGALGQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWE 147 (470)
T ss_pred HHHHHHHHHHHHHhc---ccceeCC--CCc-ccCC-hhhHHHHHHhhccCCCCccccCCcchhHHHHHHHHHHHHHHHhC
Confidence 455555565555332 2225665 321 1121 23444444444433 222233321 1457889999999988776
Q ss_pred CCCCCCCEEEecCHHHHHHHHHHHhcC--CCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCC
Q 014603 106 YKLSPDDVYLTLGCTQAIEVILTVLAR--PGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADEN 183 (422)
Q Consensus 106 ~~~~~~~i~~~~g~~~a~~~~~~~l~~--~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~ 183 (422)
.+-+...=++|+|||+++..++.+..+ +...|++++..|+++..++..+|++++.+|.+ .++.+|++.|++.+.++
T Consensus 148 ~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~Sv~KAa~llgi~~~~Vp~d--~~g~mD~~aL~~aI~~d 225 (470)
T PLN02263 148 IEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDTL--VSGEIDCADFKAKLLAN 225 (470)
T ss_pred CCCCCCeEEEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHHHHHHHHhcCCcceEeccC--CCCcCcHHHHHHHHHhC
Confidence 443222347899999999988776543 33478889999999999999999999999975 45679999999988654
Q ss_pred ---ceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCc-----EEEEcccccccccCC-CCCCCccccCCCCCeEEEecCc
Q 014603 184 ---TVALVIINPGNPCGNVYTYQHLQKIAETAKKLGI-----MVIADEVYDHLAFGN-TPFVPMGVFGSIVPVLTLGSIS 254 (422)
Q Consensus 184 ---~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~-----~li~D~~~~~~~~~~-~~~~~~~~~~~~~~~i~i~s~s 254 (422)
+.+++.+-++.++|.+ +++++|.++|+++|+ ++++|.+|+++..-- .....+.-... -.-+..+++
T Consensus 226 ~~~P~iVvataGTT~~GAi---Dpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~~~~~df~~~--vDSIsvD~H 300 (470)
T PLN02263 226 KDKPAIINVNIGTTVKGAV---DDLDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVKRAPKVTFKKP--IGSVSVSGH 300 (470)
T ss_pred CCCcEEEEEEecCCCCcCC---CCHHHHHHHHHHcCCccCCeeEEEeccchhhHhhhcccccccCCCcC--ccEEEECCc
Confidence 3445566778899999 889999999999997 999999998754310 01111111111 114455899
Q ss_pred cccCCCCceeEEEEeeCCCCcccchhHHHHHHhhh--------hhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHH
Q 014603 255 KRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL--------NISSDPATFIQGAVPQILEKTEEEFFSKITDILRETA 326 (422)
Q Consensus 255 K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 326 (422)
|+ +.....+|.++.+++ ..+.+.... ...++-+......+-..|.....+.+.+..++..+++
T Consensus 301 K~-l~~P~~cgvll~R~~--------~~~~~~~~~~Yl~~~d~ti~gSR~g~~al~lW~~L~~~G~~G~~~~i~~~~~~A 371 (470)
T PLN02263 301 KF-VGCPMPCGVQITRME--------HINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNA 371 (470)
T ss_pred cc-cCCCcCEEEEEEehh--------hHhhhccChHhhCCCCCCcCCCCCcHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 99 566678999998742 122221110 0111111111222333344444678888999999999
Q ss_pred HHHHHHhhcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHH
Q 014603 327 DICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSAL 404 (422)
Q Consensus 327 ~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l 404 (422)
+++.+.|++. ++..+..|... .+.++-+ .... . .+|..+.+ .++.+++++. ++.+.+
T Consensus 372 ~~l~~~l~~~-g~~~~~~p~s~-~V~f~~p--------~~~~----~--~~gW~L~~-----~~~~~Hivvmphv~~~~i 430 (470)
T PLN02263 372 HYLKDRLREA-GISAMLNELSS-TVVFERP--------KDEE----F--VRRWQLAC-----QGNIAHVVVMPSVTIEKL 430 (470)
T ss_pred HHHHHHHHhC-CCeEEeCCCce-EEEEecC--------chHH----h--hcceEEcc-----CCCcEEEEEcCCCCHHHH
Confidence 9999999998 55545556543 3333332 1111 1 23665554 2356888886 578999
Q ss_pred HHHHHHHHHHHHH
Q 014603 405 EDGLGRMKAFYDR 417 (422)
Q Consensus 405 ~~~~~~l~~~~~~ 417 (422)
+++++.|++....
T Consensus 431 d~fi~DL~~~~~~ 443 (470)
T PLN02263 431 DYFLKELVEKRST 443 (470)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999887654
No 356
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.71 E-value=1.5e-14 Score=144.96 Aligned_cols=310 Identities=13% Similarity=0.090 Sum_probs=191.1
Q ss_pred CCCCC---CCCCHHHHHHHHHHHhhcCCCCCCCCCEEEec-CHHHHHHHHHHHhc----C---C-CCEEEecCCCccchH
Q 014603 81 NCYSS---TVGILPARRAIADYLNRDLPYKLSPDDVYLTL-GCTQAIEVILTVLA----R---P-GANILLPRPGFPYYE 148 (422)
Q Consensus 81 ~~y~~---~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~-g~~~a~~~~~~~l~----~---~-gd~Vl~~~~~~~~~~ 148 (422)
..|.| .+|+.++-..+.+++.+..| .+.+.+.+ +|..+..+++.++. . + .++|+++...|+...
T Consensus 530 hPyqp~e~sQG~lq~i~elq~~l~eLtG----md~~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNp 605 (954)
T PRK12566 530 HPFAPREQAEGYRAMIDELEAWLCAITG----FDAICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNP 605 (954)
T ss_pred CCCCchhhhcCHHHHHHHHHHHHHHHHC----CCeEeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCH
Confidence 35665 55655555455555544333 33445555 45555545555543 1 2 368899998886666
Q ss_pred HHHhhCCCeEEEeeccCCCCcccCHHHHHHhhc---CCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccc
Q 014603 149 ARATHSHLEVRHFDLLPAKGWEVDLDAVEALAD---ENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVY 225 (422)
Q Consensus 149 ~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~---~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~ 225 (422)
..+...|++++.++.+. ++.+|+++|++.++ +++.++++++|++-++.. +++++|+++|+++|+++++|.++
T Consensus 606 asa~~~GieVv~Vp~D~--~G~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e---~~V~eI~~iah~~Galv~vDgA~ 680 (954)
T PRK12566 606 ASAQMAGMRVVIVECDP--DGNVDLDDLKAKAAAAGDRLSCLMITYPSTHGVYE---EGIREICEVVHQHGGQVYMDGAN 680 (954)
T ss_pred HHHHHCCCEEEEeccCC--CCCcCHHHHHHHhhccCCCEEEEEEEecCcCceec---chHHHHHHHHHHcCCEEEEEeeC
Confidence 66778899999999863 34699999999986 577788888888755443 67999999999999999999998
Q ss_pred cccccCCCCCCCccccCCCCCeEEEecCccccCCC----CceeEEEEeeCCCCcccchhHHHHHHhh------------h
Q 014603 226 DHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVP----GWRLGWLVTSDPNGILQDSGIVDSIKSF------------L 289 (422)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~----G~r~G~~~~~~~~~~~~~~~~~~~~~~~------------~ 289 (422)
.... ........++.| +++++++|+|+.| |.-+|.+.+.+ .+...+... .
T Consensus 681 ~~a~---~~l~~Pg~~GAD---i~~~s~HKtf~~P~G~GGP~vG~iav~~--------~L~pfLp~~P~~d~~G~~~r~g 746 (954)
T PRK12566 681 LNAQ---VGLARPADIGAD---VSHMNLHKTFCIPHGGGGPGMGPIGVRA--------HLAPFVANHPVVPVEGPDPNNG 746 (954)
T ss_pred hhhc---cCCCChhhcCCC---EEEecCCcccCcCccCCCCccchhhhhh--------hhhhhccCCCCcCCCCCCCCCC
Confidence 6311 112223456665 8899999998633 44466654432 111111110 1
Q ss_pred hhc--cCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCce-E--EEEecCcccccCCC
Q 014603 290 NIS--SDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSM-F--VMVKLNYSLLEGIN 364 (422)
Q Consensus 290 ~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~-~--~~~~~~~~~~~~~~ 364 (422)
..+ ...+.....++..++.....+ +.+.......+.+++.++|++..++. . .+..+. + +.+.+.........
T Consensus 747 a~S~~~~gsa~~l~~A~~Yi~~lG~e-Lk~aa~~ailnAnYla~rL~~~~~v~-~-~~~~~~~~hEfii~~~~l~~~~g~ 823 (954)
T PRK12566 747 AVSAAPWGSASILPISWMYIAMMGPQ-LADASEVAILSANYLANQLGGAFPVL-Y-RGRNERVAHECILDLRPLKAQTGI 823 (954)
T ss_pred ceeecccchHHHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHHHHhHhhCCCC-c-CCCCCCeeeEEEEEccccccccCC
Confidence 011 111212233344444443334 56666656778889999998753444 2 332222 1 11222211000112
Q ss_pred CHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHHHHHHHHHh
Q 014603 365 SDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 365 ~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~l~~~~~~~ 418 (422)
+..++..+|+ ++||.... ..|...+.+||+++ .+++|||++++.++.+.++.
T Consensus 824 ~~~dvakRL~-d~Gihapt-~~fPv~~~LmIepTE~eskeEIDrf~eAL~~I~~e~ 877 (954)
T PRK12566 824 SEEDVAKRLM-DYGFHAPT-MSFPVPGTLMVEPTESESKAELDRFVEAMLSIRAEI 877 (954)
T ss_pred CHHHHHHHHH-HCCcEEeE-EeeccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHH
Confidence 5677888876 77998654 34445789999998 78899999999999888774
No 357
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.71 E-value=3.4e-16 Score=140.61 Aligned_cols=320 Identities=13% Similarity=0.077 Sum_probs=205.1
Q ss_pred CCCcHHHHHHHHHHhhCC--CCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEE
Q 014603 61 FRTASVAVDAIVHSVRSA--RFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANIL 138 (422)
Q Consensus 61 ~~~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl 138 (422)
.+..+.+.+++...-... ....-+...-+.++++.+|+|++ .++.++|..| -..+...+.+++.+|.-|+
T Consensus 154 g~ca~~~~~~~~kygl~~css~~e~G~~~~hkelE~l~A~f~g-------~e~a~vF~mG-f~TNs~~~p~l~~~gsLIi 225 (519)
T KOG1357|consen 154 GPCAEASLKSFDKYGLSRCSSRHEAGTTEEHKELEELVARFLG-------VEDAIVFSMG-FATNSMNIPSLLGKGSLII 225 (519)
T ss_pred CcCChHHHHHHHHhcccccccchhcccHHHHHHHHHHHHHhcC-------CcceEEEecc-ccccccCcceeecCCccee
Confidence 456677777776653221 11112223446788889999984 4567777666 4455555788999999999
Q ss_pred ecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHH-Hhh---cCC-----ceEEEEeCC-CCCcccccCHHHHHHH
Q 014603 139 LPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVE-ALA---DEN-----TVALVIINP-GNPCGNVYTYQHLQKI 208 (422)
Q Consensus 139 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~-~~~---~~~-----~~~i~i~~p-~nptG~~~~~~~l~~i 208 (422)
..+..|.++...++..|+.++.+..+. .-|+|.+. +.+ +++ .+.+++... ...-|.+ ..+.++
T Consensus 226 SDelNHaSi~~GaRLSgAtiRVfkHNd----m~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~i---v~Lp~v 298 (519)
T KOG1357|consen 226 SDELNHASLITGARLSGATTRVFRHND----MQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTI---VDLPEV 298 (519)
T ss_pred eccccchheeccccccCceEEEEecCC----HHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCee---cccHHH
Confidence 999999999999999999999887532 12444332 222 121 233444433 4566776 578999
Q ss_pred HHHHHHcCcEEEEccccccccc--CCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHH
Q 014603 209 AETAKKLGIMVIADEVYDHLAF--GNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIK 286 (422)
Q Consensus 209 ~~~~~~~~~~li~D~~~~~~~~--~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~ 286 (422)
+++++++..+++.||+|+.... +|.....+...++.+..+.+++|.|+|+..| |++.++ +++++.++
T Consensus 299 valkkkykayl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSfga~G---Gyiags--------k~lid~lr 367 (519)
T KOG1357|consen 299 VALKKKYKAYLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSFGAAG---GYIAGS--------KELIDYLR 367 (519)
T ss_pred HHhhccccEEEEeeccccccccCCCCcceeeccCCCchhheeecceehhhccccc---ceecCc--------HHHHhhhc
Confidence 9999999999999999986554 2333333333344444688999999999888 999886 46777776
Q ss_pred hhhhh----ccCcchHHHHHHHHHHhhc----hHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceE--EEEecC
Q 014603 287 SFLNI----SSDPATFIQGAVPQILEKT----EEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMF--VMVKLN 356 (422)
Q Consensus 287 ~~~~~----~~~~~~~~~~a~~~~l~~~----~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~--~~~~~~ 356 (422)
..... +..++++.|.... .++.. ....-++..+++++++.+++..|+.. ++.+. ...+... +++..+
T Consensus 368 t~s~~~~yat~~sppvaqq~~s-sl~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~~-gfivy-G~~dSpVvplll~~~ 444 (519)
T KOG1357|consen 368 TPSPSALYATSLSPPVAQQILT-SVKHIMGEDGTNRGRQKIERLAENSRYFRWELQKM-GFIVY-GNNDSPVVPLLLYGP 444 (519)
T ss_pred cCCCceeecccCChHHHHHHHH-HHHhhcCCCcccHHHHHHHHHHhhhHHHHHhhhcC-cEEEe-cCCCCCcceeeecCc
Confidence 54421 2244445554443 33321 24556777889999999999999987 55523 3333322 222222
Q ss_pred cccccCCCCHHHHHHHHHHhcCeEEecCCCCC-C--CCeEEEEec--cChHHHHHHHHHHHHHHHH
Q 014603 357 YSLLEGINSDMEFALKLAKEESVIVLPGITVG-L--KDWLRITFA--VEPSALEDGLGRMKAFYDR 417 (422)
Q Consensus 357 ~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~-~--~~~iRis~~--~~~~~l~~~~~~l~~~~~~ 417 (422)
. .-..+-+.++++ ++.+....+.. . ...+|+|.+ ++.|+++++++.+.++-+.
T Consensus 445 ~-------k~~~f~r~~l~~-nigvVvvgfPatpl~e~r~R~c~Sa~ht~e~ld~~l~~i~~~g~~ 502 (519)
T KOG1357|consen 445 A-------KIVAFSREMLER-NIGVVVVGFPATPLLESRARFCLSASHTKEDLDRALEVIDRVGDE 502 (519)
T ss_pred c-------cccHHHHHHHhc-CceEEEEeCCCchHHHhHHHhhhcccccHHHHHHHHHHHhhhchh
Confidence 1 123344455544 66555444433 2 577898887 7889999999998877543
No 358
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.69 E-value=8.3e-16 Score=142.46 Aligned_cols=237 Identities=18% Similarity=0.186 Sum_probs=146.9
Q ss_pred CCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeecc
Q 014603 85 STVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLL 164 (422)
Q Consensus 85 ~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~ 164 (422)
|...+.+.++.+|+.+++ .+..++++|+|.++.+++.+++++||+|+++++||.+........|+.+++++..
T Consensus 64 p~G~I~eAe~~aA~~fGA-------d~t~flvnGsT~g~~a~i~a~~~~gd~VLv~RN~HkSv~~alil~ga~Pvyi~p~ 136 (417)
T PF01276_consen 64 PEGIIKEAEELAARAFGA-------DKTFFLVNGSTSGNQAMIMALCRPGDKVLVDRNCHKSVYNALILSGAIPVYIPPE 136 (417)
T ss_dssp TBTHHHHHHHHHHHHHTE-------SEEEEESSHHHHHHHHHHHHHTTTTCEEEEETT--HHHHHHHHHHTEEEEEEEEE
T ss_pred CccHHHHHHHHHHHhcCC-------CeEEEEecCchHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHHHHcCCeEEEecCC
Confidence 444577889999999843 3467788999999999999999999999999999999999999999998887654
Q ss_pred CCC-C--cccCH-----HHHHHhhcC--CceE---EEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEccccccc-cc
Q 014603 165 PAK-G--WEVDL-----DAVEALADE--NTVA---LVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHL-AF 230 (422)
Q Consensus 165 ~~~-~--~~~d~-----~~l~~~~~~--~~~~---i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~-~~ 230 (422)
.+. + ..+++ +.+++++++ ..++ +++++|+. -|+++ ++++|+++|+++++.|++|||++.. .|
T Consensus 137 ~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY-~Gv~~---di~~I~~~~h~~~~~llvDEAhGah~~F 212 (417)
T PF01276_consen 137 DNEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTY-YGVCY---DIKEIAEICHKHGIPLLVDEAHGAHFGF 212 (417)
T ss_dssp E-TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-T-TSEEE----HHHHHHHHCCTECEEEEE-TT-TTGGC
T ss_pred ccccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCC-CeEEE---CHHHHHHHhcccCCEEEEEccccccccC
Confidence 211 1 23455 888887754 3344 89999987 78884 7899999999999999999998753 33
Q ss_pred CCCCCCCccccCC----CCCeEEEecCccccCCCCcee-EEEEeeCCCCcccchhHHHHHHhhhh--hccCcchHHHHHH
Q 014603 231 GNTPFVPMGVFGS----IVPVLTLGSISKRWIVPGWRL-GWLVTSDPNGILQDSGIVDSIKSFLN--ISSDPATFIQGAV 303 (422)
Q Consensus 231 ~~~~~~~~~~~~~----~~~~i~i~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~ 303 (422)
.. .+.+...++. +..++++.|.+|++ +++.. +++...+... . -.++++.... .+.+|+.+.++.+
T Consensus 213 ~~-lp~~a~~~gad~~~~~~~~vvqS~HKtL--~altQts~lh~~~~~~-v----~~~~~~~~l~~~~TTSPSY~lmASl 284 (417)
T PF01276_consen 213 HP-LPRSALALGADRPNDPGIIVVQSTHKTL--PALTQTSMLHVKGDRI-V----DHERVNEALSMHQTTSPSYPLMASL 284 (417)
T ss_dssp SG-GGTTCSSTTSS-CTSBEEEEEEEHHHHS--SS-TT-EEEEEETCCC-T----THHHHHHHHHHHS-SS--HHHHHHH
T ss_pred CC-CccchhhccCccccccceeeeechhhcc--cccccceEEEecCCCc-c----cHHHHHHHHHHHcCCChHHHHHHHH
Confidence 31 1112122222 23479999999994 55554 5556654321 1 1344444332 2346666666555
Q ss_pred HHHHhhchHHHHHHHHHHHHHHHHHHHHHh---hcCCCCC
Q 014603 304 PQILEKTEEEFFSKITDILRETADICCDRL---KEIPCIT 340 (422)
Q Consensus 304 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L---~~~~~~~ 340 (422)
..+........=++..++..++.+.+++.| .++.++.
T Consensus 285 D~a~~~m~~~~G~~l~~~~i~~a~~~R~~i~~~~~~~~~~ 324 (417)
T PF01276_consen 285 DVARAQMEEEEGRELLEEAIELAEEFRKKINRLNDIWGFK 324 (417)
T ss_dssp HHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHCCT-SSE
T ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhcCCCceEe
Confidence 544433211222333344444444555555 5554544
No 359
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=99.67 E-value=3.8e-15 Score=138.10 Aligned_cols=271 Identities=20% Similarity=0.189 Sum_probs=164.2
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 122 (422)
+|+.++||..+..+...+ .-+|.+.+++.+++..... ........+.+..+++.|.+..+ -..+.+++++||++|
T Consensus 14 dG~~~lD~~~~~~~~~lG-h~~p~i~~ai~~~~~~~~~--~~~~~~~~~~~~~la~~L~~~~p--~~~~~v~f~~sGseA 88 (339)
T PF00202_consen 14 DGREYLDFMSGYGSVNLG-HNHPEIAEAIAEQANKLNY--VSFSGFTHPEAAELAEKLAELFP--GGLDRVFFANSGSEA 88 (339)
T ss_dssp TSEEEEESSHHHHTTTT--BT-HHHHHHHHHHHHHCSS--CSTTTSEEHHHHHHHHHHHHHSS--TTEEEEEEESSHHHH
T ss_pred CCCEEEECCCCccceecC-CCccccchhHHHHhhhccc--ccccceeccchhhhhhhhhhccc--cccceeeeccCchHH
Confidence 688899998775443222 3568999999999876322 12122233455566666655442 255799999999999
Q ss_pred HHHHHHHhc-------C-CCCEEEecCCCccchHHHHhhC-C------------CeEEEeeccCCCC---cccCHHHHHH
Q 014603 123 IEVILTVLA-------R-PGANILLPRPGFPYYEARATHS-H------------LEVRHFDLLPAKG---WEVDLDAVEA 178 (422)
Q Consensus 123 ~~~~~~~l~-------~-~gd~Vl~~~~~~~~~~~~~~~~-g------------~~~~~~~~~~~~~---~~~d~~~l~~ 178 (422)
++.+++... . ...+|+....+||+....+... + ..+..+|...... .....+.+++
T Consensus 89 ve~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 168 (339)
T PF00202_consen 89 VEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPAADEEEQACLNALEE 168 (339)
T ss_dssp HHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCCccchhhhHHHHHHHHHH
Confidence 999998765 1 2379999999998864433321 1 1233444321000 0000111222
Q ss_pred ---hhcCCceEEEEeCC-CCCccc-ccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecC
Q 014603 179 ---LADENTVALVIINP-GNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSI 253 (422)
Q Consensus 179 ---~~~~~~~~i~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~ 253 (422)
....+..+.++..| +...|. .++++.+++|.++|++||+++|+||++.++.++|... ....++..++++++
T Consensus 169 ~~~~~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~~~-a~~~~gv~PDiv~~--- 244 (339)
T PF00202_consen 169 LIAALNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGKFF-ASEHYGVDPDIVTF--- 244 (339)
T ss_dssp HHHHHHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSSSS-GHHHHTSSSSEEEE---
T ss_pred HHHhhcCCcEEEEEEeccccccCccccccchhhehcccccccccceecccccccccccCCcc-ceecccccCccccc---
Confidence 22334556667777 444565 5677889999999999999999999999988887643 33444444445444
Q ss_pred ccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhh-hhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHH
Q 014603 254 SKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDR 332 (422)
Q Consensus 254 sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 332 (422)
+|.+ ..|+++|.++++ +++.+.+.... ..+...++++++++.+.|+...+.. ..++++++.+++.+.
T Consensus 245 gK~l-~gG~p~sav~~~--------~~i~~~~~~~~~~~T~~g~p~~~aaa~~~l~~~~~~~---~~~~~~~~g~~l~~~ 312 (339)
T PF00202_consen 245 GKGL-GGGLPISAVLGS--------EEIMEAFQPGSHGSTFGGNPLSCAAALATLEILEEED---LLERVRELGERLREG 312 (339)
T ss_dssp EGGG-GTTSSEEEEEEE--------HHHHTTSCTTSSTCTTTT-HHHHHHHHHHHHHHHHTT---HHHHHHHHHHHHHHH
T ss_pred ccch-hhhhhccccccc--------chhhccccccccccccccchHhhhhhhhHHHhhccHH---HHHHHHHHHHHHHHH
Confidence 5996 556999999987 45666553333 2345678899999999888644321 233334444444444
Q ss_pred hh
Q 014603 333 LK 334 (422)
Q Consensus 333 L~ 334 (422)
|+
T Consensus 313 L~ 314 (339)
T PF00202_consen 313 LR 314 (339)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 360
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.67 E-value=4.5e-16 Score=139.60 Aligned_cols=245 Identities=15% Similarity=0.133 Sum_probs=157.9
Q ss_pred CcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCC
Q 014603 63 TASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRP 142 (422)
Q Consensus 63 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~ 142 (422)
+.|++.++|.+.... .. .|+......++++.+++++ ..+..+|+++||.|..++++++++|++.|++..+
T Consensus 7 ~~~~m~~a~~~a~~g-d~-~Yg~D~~~~~l~~~i~~l~--------g~e~a~f~~sGT~An~~al~~~~~~~~~vi~~~~ 76 (290)
T PF01212_consen 7 PTPAMLEAMAAANVG-DD-AYGEDPTTARLEERIAELF--------GKEAALFVPSGTMANQLALRAHLRPGESVICADT 76 (290)
T ss_dssp S-HHEEHHHHHTTSB--C-CTTSSHHHHHHHHHHHHHH--------TSSEEEEESSHHHHHHHHHHHHHHTTEEEEEETT
T ss_pred CCHHHHHHHHccccC-Cc-ccCCChhHHHHHHHHHHHc--------CCCEEEEeCCCChHHHHHHHHHHhcCCceecccc
Confidence 458999999554433 33 6998888999999999999 3456789999999999999999999999999999
Q ss_pred Cccch---HHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC------CceEEEEeCCCCC-cccccCHHHHHHHHHHH
Q 014603 143 GFPYY---EARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE------NTVALVIINPGNP-CGNVYTYQHLQKIAETA 212 (422)
Q Consensus 143 ~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~i~i~~p~np-tG~~~~~~~l~~i~~~~ 212 (422)
+|... .......|.+++.++.. ++..+++++|++.+.. ++++|.+++|+|. .|+++|.+++++|.++|
T Consensus 77 aHi~~~E~ga~~~~~G~~~~~l~~~--~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a 154 (290)
T PF01212_consen 77 AHIHFDETGAIEELSGAKLIPLPSD--DDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAISELA 154 (290)
T ss_dssp EHHHHSSTTHHHHHTTCEEEEEBEC--TGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHHH
T ss_pred ceeeeeccchhhHhcCcEEEECCCc--ccCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHH
Confidence 88432 33345578888877753 2257999999997743 5688899999885 48999999999999999
Q ss_pred HHcCcEEEEcccccccc--cCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhh
Q 014603 213 KKLGIMVIADEVYDHLA--FGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN 290 (422)
Q Consensus 213 ~~~~~~li~D~~~~~~~--~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (422)
+++|+.++.|.+--.-. ..+. ++..+...-+ ++..|++|.+++++ |.+++-+ ++++++......
T Consensus 155 ~~~gl~lhmDGARl~~a~~~~~~---~~~e~~~~~D-~v~~~~tK~~g~~~---Gavl~~~-------~~~i~~~~~~~k 220 (290)
T PF01212_consen 155 REHGLPLHMDGARLANAAAALGV---SLAEIAAGAD-SVSFGGTKNGGAPG---GAVLAGN-------KEFIAKARRQRK 220 (290)
T ss_dssp HHHT-EEEEEETTHHHHHCHHHH---HHHHHHTTSS-EEEEETTSTT-SSS---EEEEEES-------HHHHHHHHHHHH
T ss_pred HhCceEEEEehhhHHHhhhcccc---cHHHHhhhCC-EEEEEEEccccccc---ceEEEec-------hHHHHHHHHHHH
Confidence 99999999999953211 1111 1122211112 55568999876665 5655543 454444333321
Q ss_pred hc-cCc--chHHHH------HHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 014603 291 IS-SDP--ATFIQG------AVPQILEKTEEEFFSKITDILRETADICCDRLKEIPC 338 (422)
Q Consensus 291 ~~-~~~--~~~~~~------a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 338 (422)
.. +.. ..+..+ ++...++. + .....+..++.+.+.+.|+.+++
T Consensus 221 ~~gg~~~~~G~~~a~~~~~~~~l~~l~~----~-~~~~~~~~~~A~~La~~l~~~~~ 272 (290)
T PF01212_consen 221 RLGGGMRQAGVLAAAELYQFAALRALEL----W-LERARHANAMAKRLAAGLEALGG 272 (290)
T ss_dssp HHTHHHHHTTHHHHHHHHHHHHHCHEEC----S-HHHHHCHHHHHHCHHHCHHEECE
T ss_pred HhccCeeecceeeeechhhHHHHHHHHh----h-HHHHHHHHHHHHHHHHHHHHCCC
Confidence 11 100 111111 22222322 1 33445566778888888888744
No 361
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.65 E-value=3.1e-13 Score=138.84 Aligned_cols=295 Identities=17% Similarity=0.166 Sum_probs=189.1
Q ss_pred CcHHHHHHHHHHhhCCCCCCCCCCC-----C----CHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHh-cC
Q 014603 63 TASVAVDAIVHSVRSARFNCYSSTV-----G----ILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVL-AR 132 (422)
Q Consensus 63 ~~~~v~~a~~~~~~~~~~~~y~~~~-----g----~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l-~~ 132 (422)
.|+.+.+.+.+- ...+..|.|.+ | +-++++.++++. +.+..++.+..++|++.++++.++ ..
T Consensus 90 ~P~vi~~~i~~~--~~~~t~ytPyQ~EisQG~Leal~~~Qt~la~Lt------G~~~anaSl~d~aTAa~ea~~~a~~~~ 161 (954)
T PRK05367 90 TPPVILRNILEN--PAWYTAYTPYQPEISQGRLEALLNFQTMVADLT------GLEIANASLLDEATAAAEAMALAKRVS 161 (954)
T ss_pred CcHHHHHHHHhC--cchhhccCCCChHHHHHHHHHHHHHHHHHHHHH------CCChhhccccccHHHHHHHHHHhhhhc
Confidence 344454544441 12345666543 2 345677788877 678889999999999999888776 23
Q ss_pred C--CCEEEecCCCccchHH----HHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHH
Q 014603 133 P--GANILLPRPGFPYYEA----RATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQ 206 (422)
Q Consensus 133 ~--gd~Vl~~~~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~ 206 (422)
+ +++|++++.+|+.... .++..|++++.++... |.+ ++++.++++.+| |.+|.+ ++++
T Consensus 162 ~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~~~~~------d~~------~~~~~~vlvq~p-~~~G~i---~d~~ 225 (954)
T PRK05367 162 KSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVGDAAK------ALD------HDDVFGVLLQYP-GTSGEV---RDYT 225 (954)
T ss_pred cCCCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEecCcc------CCC------cccEEEEEEecC-CCCeee---ccHH
Confidence 4 4899999999987653 4566799998887532 111 224444555565 569999 5799
Q ss_pred HHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccc-----cCCCCceeEEEEeeCCCCcccchhH
Q 014603 207 KIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKR-----WIVPGWRLGWLVTSDPNGILQDSGI 281 (422)
Q Consensus 207 ~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~-----~~~~G~r~G~~~~~~~~~~~~~~~~ 281 (422)
+|+++|+++|+++++|..+..+.. ..+...++.| +++++.+|+ ||+|| .|++.+++ ++
T Consensus 226 ~i~~~ah~~Gal~~vda~~~Al~~----l~~pge~GaD---i~vgs~qkfg~P~g~GGP~--aGflavr~--------~~ 288 (954)
T PRK05367 226 ALIAAAHARGALVAVAADLLALTL----LTPPGEMGAD---IAVGSAQRFGVPMGFGGPH--AAYFAVRD--------AY 288 (954)
T ss_pred HHHHHHHHcCCEEEEEehhhhccC----CCChhhcCCC---EEEeeCcccCCCCCCCCCC--EEEEEECH--------HH
Confidence 999999999999999986533221 1234566666 999999998 66665 88888863 33
Q ss_pred HHHHHhh-------------------------hhhccCcchHH---HHHHHHH--HhhchHHHHHHHHHHHHHHHHHHHH
Q 014603 282 VDSIKSF-------------------------LNISSDPATFI---QGAVPQI--LEKTEEEFFSKITDILRETADICCD 331 (422)
Q Consensus 282 ~~~~~~~-------------------------~~~~~~~~~~~---~~a~~~~--l~~~~~~~~~~~~~~~~~~~~~l~~ 331 (422)
.+++... +.-..+.|.-. ..++.+. +......+++++.++...+..++.+
T Consensus 289 ~r~lpgrivG~s~d~~g~~~~~lalqtReqhiRrekaTsNict~qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~ 368 (954)
T PRK05367 289 KRSMPGRIVGVSVDAAGNPALRLALQTREQHIRREKATSNICTAQVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAA 368 (954)
T ss_pred HhhCCCCeeeeecccCCCcccccccccccccccccccccccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHH
Confidence 3333210 00001212111 1111111 2323467788999999999999999
Q ss_pred HhhcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHH
Q 014603 332 RLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLG 409 (422)
Q Consensus 332 ~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~ 409 (422)
.|+.. ++.+...+..+ .+.++++. +..++..++ .++||.+..- ..+.+|+|++ +++++|+.+++
T Consensus 369 ~L~~~-G~~~~~~~~f~-~~~~~~~~-------~~~~i~~~l-~~~gi~~~~~----~~~~l~is~~e~~t~~did~l~~ 434 (954)
T PRK05367 369 GLRAL-GLEVVHDSFFD-TLTVEVGG-------DAAAVLARA-LAAGINLRRV----DDDHVGISLDETTTREDLAALLA 434 (954)
T ss_pred HHHhc-CcccCCCCCCC-eEEEeCCC-------CHHHHHHHH-HHCCceeccc----cCCEEEEEecccCCHHHHHHHHH
Confidence 99874 77733222111 22233321 466777776 5569888332 1567999998 78999999999
Q ss_pred HHH
Q 014603 410 RMK 412 (422)
Q Consensus 410 ~l~ 412 (422)
.|.
T Consensus 435 ~l~ 437 (954)
T PRK05367 435 VFG 437 (954)
T ss_pred HHc
Confidence 996
No 362
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.64 E-value=1.5e-13 Score=135.38 Aligned_cols=170 Identities=12% Similarity=0.137 Sum_probs=120.6
Q ss_pred CCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHH-HhhCCCeEEEeec
Q 014603 85 STVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEAR-ATHSHLEVRHFDL 163 (422)
Q Consensus 85 ~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~-~~~~g~~~~~~~~ 163 (422)
+...+.+.++.+|+.+++ .+..++++|+|.++.+++.+++.+||.||++++||.+.... ....|+.++++.-
T Consensus 172 ~eG~i~eAq~~AA~~fgA-------d~tyFlvNGTS~gn~a~i~a~~~~Gd~VLvdRN~HKSv~hgaLiLsGa~PVYl~P 244 (720)
T PRK13578 172 HEGAAKDAQKHAAKVFNA-------DKTYFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNHHGALIQAGATPVYLET 244 (720)
T ss_pred CChHHHHHHHHHHHHhCC-------CceEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHHcCCeEEEeec
Confidence 344467888888888842 34678899999999999999999999999999999988775 7789999888764
Q ss_pred cCCCCc----ccCH-----HHHHHhhcCC----------ceEEEEeCCCCCcccccCHHHHHHHHHH-HHHcCcEEEEcc
Q 014603 164 LPAKGW----EVDL-----DAVEALADEN----------TVALVIINPGNPCGNVYTYQHLQKIAET-AKKLGIMVIADE 223 (422)
Q Consensus 164 ~~~~~~----~~d~-----~~l~~~~~~~----------~~~i~i~~p~nptG~~~~~~~l~~i~~~-~~~~~~~li~D~ 223 (422)
.. +.+ .++. +.+++.+.++ .+++++++|+. -|+++ ++++|+++ ++.++ .|++||
T Consensus 245 ~~-n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTY-dG~~y---di~~I~~~~~h~~~-~llvDE 318 (720)
T PRK13578 245 AR-NPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTY-DGTIY---NARQVVDKIGHLCD-YILFDS 318 (720)
T ss_pred cc-cccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCC-cceee---cHHHHHHHhhccCC-cEEEeC
Confidence 33 122 2354 4477776543 47889999987 78886 56777777 67777 999999
Q ss_pred cccccc-cCCC--CCC-CccccCCC-CCeEEEecCccccCCCCceeEE-EEe
Q 014603 224 VYDHLA-FGNT--PFV-PMGVFGSI-VPVLTLGSISKRWIVPGWRLGW-LVT 269 (422)
Q Consensus 224 ~~~~~~-~~~~--~~~-~~~~~~~~-~~~i~i~s~sK~~~~~G~r~G~-~~~ 269 (422)
|++.+. |... ... .....+.+ +.++++.|.+|.+ +++..+. +..
T Consensus 319 Ahgah~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL--~alTQaS~LHv 368 (720)
T PRK13578 319 AWVGYEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQ--AGFSQTSQIHK 368 (720)
T ss_pred cchhhhccCcccccCChhhhhcCCCCCCeEEEEChhhcc--hhhhhHhhhhc
Confidence 987532 3321 011 11223333 4579999999984 5655544 444
No 363
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.63 E-value=5.8e-13 Score=122.84 Aligned_cols=340 Identities=16% Similarity=0.143 Sum_probs=210.2
Q ss_pred CCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHH
Q 014603 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI 123 (422)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~ 123 (422)
.+-+|||-+...+ -.+.+.++++|.. + ...|...+....|++.+++++ ..+.+++|..++.+-
T Consensus 40 ~dV~IDLrSDTgT----~apS~~m~aAM~~----G-DD~Y~gdpSv~~Lee~vael~--------G~E~alpthqGRgaE 102 (467)
T TIGR02617 40 EDVFIDLLTDSGT----GAVTQSMQAAMMR----G-DEAYSGSRSYYALAESVKNIF--------GYQYTIPTHQGRGAE 102 (467)
T ss_pred CCeEEECccCCCC----CCCCHHHHHHHHc----C-CcccccCchHHHHHHHHHHHh--------CCceEEECCCCchHH
Confidence 3446888766544 1356888888886 2 236887778899999999999 345688999999999
Q ss_pred HHHHHHhcC-CCCEEEecCC-------Cccc-hHHHHhhCCCeEEEeecc--------CCCCcccCHHHHHHhhcC----
Q 014603 124 EVILTVLAR-PGANILLPRP-------GFPY-YEARATHSHLEVRHFDLL--------PAKGWEVDLDAVEALADE---- 182 (422)
Q Consensus 124 ~~~~~~l~~-~gd~Vl~~~~-------~~~~-~~~~~~~~g~~~~~~~~~--------~~~~~~~d~~~l~~~~~~---- 182 (422)
.++++.+++ +|+++.+..+ .|.. ....+...|+.++.++.. ......+|++.+++.+++
T Consensus 103 ~Il~~~~~~~~g~e~g~~~~~~~v~hn~~fett~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~ 182 (467)
T TIGR02617 103 QIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPN 182 (467)
T ss_pred HHHHHhhcccccccccccccccccceEEEEecchHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCCC
Confidence 999999988 7887775443 2222 234566788777765321 122357899999999874
Q ss_pred CceEEEEeCCCC-CcccccCHHHHHHHHHHHHHcCcEEEEcccccc--c--------ccCCCCCCCcc-c-cCCCCCeEE
Q 014603 183 NTVALVIINPGN-PCGNVYTYQHLQKIAETAKKLGIMVIADEVYDH--L--------AFGNTPFVPMG-V-FGSIVPVLT 249 (422)
Q Consensus 183 ~~~~i~i~~p~n-ptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~--~--------~~~~~~~~~~~-~-~~~~~~~i~ 249 (422)
+...+...-.+| -.|..+|.+.++++.++|++||+.++.|.+--. . .+.+.+...+. . +...| .+
T Consensus 183 ~i~~v~~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aD--sv 260 (467)
T TIGR02617 183 NVPYIVATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYAD--ML 260 (467)
T ss_pred CceeeeeeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCC--EE
Confidence 222222111123 467899999999999999999999999997432 1 12232211110 0 01111 55
Q ss_pred EecCccccCCC-CceeEEEEeeCCCCcccchhHHHHHHhhhh------hccCcchHHHHHHHHHHhhc-hHHHHHHHHHH
Q 014603 250 LGSISKRWIVP-GWRLGWLVTSDPNGILQDSGIVDSIKSFLN------ISSDPATFIQGAVPQILEKT-EEEFFSKITDI 321 (422)
Q Consensus 250 i~s~sK~~~~~-G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~ 321 (422)
..|+||.++.| | |++++++.. ++ ++.++++...- +.++.+.-.+.|++.-|++. .++++..+..+
T Consensus 261 t~slsKglgApvG---g~Lag~d~~-~~---~l~~~~~~~~i~~EGf~tYGGlagrd~ea~a~Gl~e~~~~~yl~~ri~q 333 (467)
T TIGR02617 261 AMSAKKDAMVPMG---GLLCFKDDS-FF---DVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMNLDWLAYRINQ 333 (467)
T ss_pred EEEcCCCCCCccc---ceEEecchh-HH---HHHHHHHhhcccccCCcCcCchhHHHHHHHHhhhhhcccHHHHHHHHHH
Confidence 66899998766 4 566665410 00 34455444321 22344555566666566653 25667766666
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEec----CcccccCCCCHHHHHHHHHHhcCeEEec-CCC-CCC------
Q 014603 322 LRETADICCDRLKEIPCITCPKKPEGSMFVMVKL----NYSLLEGINSDMEFALKLAKEESVIVLP-GIT-VGL------ 389 (422)
Q Consensus 322 ~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~gi~v~~-g~~-~~~------ 389 (422)
++.+.+ .|++. |+.++ . .+|.-+++.. |.-..... .+..+..+|-.+.||--.- |+. ++.
T Consensus 334 v~yl~~----~L~~~-Gvpi~-~-~Gghav~iDa~~~lphip~~~f-pa~al~~~ly~~~GiR~~e~G~~~~~rd~~~~~ 405 (467)
T TIGR02617 334 VQYLVN----GLEEI-GVVCQ-Q-AGGHAAFVDAGKLLPHIPADQF-PAHALACELYKVAGIRAVEIGSLLLGRDPKTGK 405 (467)
T ss_pred HHHHHH----HHHhC-CCcEE-e-cCccEEEEehhhhCCCCChhhC-cHHHHHHHHHHHcCcceEeecceecccCCCCCc
Confidence 655554 44544 77644 4 5565555542 21111111 3556666666677876332 222 111
Q ss_pred -----CCeEEEEec---cChHHHHHHHHHHHHHHHH
Q 014603 390 -----KDWLRITFA---VEPSALEDGLGRMKAFYDR 417 (422)
Q Consensus 390 -----~~~iRis~~---~~~~~l~~~~~~l~~~~~~ 417 (422)
-..+|+++. .+.+.++..++++..+.++
T Consensus 406 ~~~~~~el~RlaipRrvyt~~h~d~v~~~~~~~~~~ 441 (467)
T TIGR02617 406 QLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKEN 441 (467)
T ss_pred cCCCccceeeeccccccccHhHHHHHHHHHHHHHhh
Confidence 257999997 4789999999999887654
No 364
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.63 E-value=4.3e-14 Score=125.02 Aligned_cols=341 Identities=15% Similarity=0.150 Sum_probs=215.1
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCC------CCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEe
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARF------NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLT 116 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~------~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~ 116 (422)
+|.+++||++.+ +.++.-.+++.+.....+..... .-|+...-+.++++.||+|++ .++-++.
T Consensus 92 ~G~~~~N~aS~N---fL~l~~~~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~iakF~G--------~E~aivY 160 (467)
T KOG1358|consen 92 DGKDVLNFASAN---FLGLIENEEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKRIAKFMG--------TEDAIVY 160 (467)
T ss_pred cCceeecccchh---hhhhcccHHHHHHHHHHHHHhCCCCcCCCcccccceeecccHHHHHHhhC--------Ccceeee
Confidence 588899998877 44566778888888887776322 236666678899999999993 3455555
Q ss_pred cCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC------------Cc
Q 014603 117 LGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE------------NT 184 (422)
Q Consensus 117 ~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------------~~ 184 (422)
+-+.++++.++.+++++||.|.+.+-...+.....+...-.++++..+ |.+.++..+.+ .+
T Consensus 161 s~gF~ti~S~ipafsKrGDIi~~de~~nfaIq~GlqlSRS~i~~Fkhn-------dm~~lerll~E~~~~~~K~~k~~~~ 233 (467)
T KOG1358|consen 161 SYGFSTIESAIPAFSKRGDIIFVDEAVNFAIQKGLQLSRSTISYFKHN-------DMEDLERLLPEQEDEDQKNPKKALT 233 (467)
T ss_pred ccccchhhhcchhhhccCcEEEEehhhhHHHHHHHhhhhheeEEecCC-------CHHHHHHhccCcchhhhhccccccc
Confidence 666778888899999999999999998888888888777777776542 44555443321 22
Q ss_pred eEEEEeCC-CCCcccccCHHHHHHHHHHHHHcCcEEEEccccccccc--CCCCCCCccccCCCCCeEEEecCccccCCCC
Q 014603 185 VALVIINP-GNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAF--GNTPFVPMGVFGSIVPVLTLGSISKRWIVPG 261 (422)
Q Consensus 185 ~~i~i~~p-~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~--~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G 261 (422)
+..++... .-++|.+. ++.+|+++..+|...+|+||.++.... +|.+.......+..+-.++++|+.-.++..|
T Consensus 234 Rrfiv~EGl~~N~g~i~---pl~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~alas~G 310 (467)
T KOG1358|consen 234 RRFIVVEGLYANTGDIC---PLPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETALASGG 310 (467)
T ss_pred eEEEEEEeeccCCCccc---ccHHHHHHHhhheEEEEEecccccccccccCccccccCCCCccceeeeeecccccccccC
Confidence 44555555 55699885 477778888899999999999886444 3444444334443333488888888866666
Q ss_pred ceeEEEEeeCCCCcccchhHHHHHHhhhhhc-cCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 014603 262 WRLGWLVTSDPNGILQDSGIVDSIKSFLNIS-SDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCIT 340 (422)
Q Consensus 262 ~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 340 (422)
|+.+++.- . ...+++......+ ...++....++..++.. .++-.+..+.++.....+.+.|....++.
T Consensus 311 ---gFc~G~~~--i----~~hQrLSg~~Y~fSAslPp~la~aa~~ai~i--~~~~p~~~~~L~~k~~~~H~~l~~~s~~~ 379 (467)
T KOG1358|consen 311 ---GFCAGKSF--I----ADHQRLSGSGYCFSASLPPYLAGAAIKAILI--EEWNPEIVQPLRAKVAKFHAALSSNSGFI 379 (467)
T ss_pred ---ceeeccee--e----EeeeeccccceeeeccCchhhhhhHHHHHHH--HhhCcchhhhhhccccccchhhhcCCceE
Confidence 67666321 1 1123333333222 23344444555555543 23333455566666666777777665555
Q ss_pred CCCCCCCceEEEEecCcccccCCCCH----HHHHHHHHHhcCeEEecCCCC------CCCCeEEEEec--cChHHHHHHH
Q 014603 341 CPKKPEGSMFVMVKLNYSLLEGINSD----MEFALKLAKEESVIVLPGITV------GLKDWLRITFA--VEPSALEDGL 408 (422)
Q Consensus 341 ~~~~~~~g~~~~~~~~~~~~~~~~~~----~~~~~~l~~~~gi~v~~g~~~------~~~~~iRis~~--~~~~~l~~~~ 408 (422)
+...+.+ ....+.+...... ..+. +++++..+.+ ++.+...... -.+..+||++. .++++++++.
T Consensus 380 v~~~~~S-Pi~hl~l~~~~~s-~e~e~~lL~eivd~~i~~-~~ll~~a~~~~~~e~~~~~pSiri~~~a~~seeel~ra~ 456 (467)
T KOG1358|consen 380 VSGSPES-PIIHLQLERSYGS-REKEEKLLEEIVDKCIAE-GVLLTRAKYLEKLERCPIPPSIRICVSAGMSEEELERAA 456 (467)
T ss_pred EecCcCC-ceeeeeecccccc-hHHHHHHHHHHHHHHHhh-cceehhhhhhhhcccCCCCCcEEEEEeCCCCHHHHHHHH
Confidence 3434443 3444555432110 0011 2344444444 7777654322 22567999997 7899999999
Q ss_pred HHHHHHHHHh
Q 014603 409 GRMKAFYDRH 418 (422)
Q Consensus 409 ~~l~~~~~~~ 418 (422)
..|++....+
T Consensus 457 ~~ik~~~~~~ 466 (467)
T KOG1358|consen 457 ELIKEVASAV 466 (467)
T ss_pred HHHHHHHHhh
Confidence 9999876543
No 365
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.61 E-value=4.3e-13 Score=132.05 Aligned_cols=303 Identities=13% Similarity=0.061 Sum_probs=180.3
Q ss_pred CCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeecc
Q 014603 85 STVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLL 164 (422)
Q Consensus 85 ~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~ 164 (422)
+...+.+.++.+|+.+++ ....++++|+|.++.+++.+++.+||.||++++||.+........|+.++++...
T Consensus 193 ~~G~i~eAe~~AA~~fgA-------d~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~haLilsga~PVYl~P~ 265 (714)
T PRK15400 193 HSGPHKEAEEYIARVFNA-------DRSYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLTHLMMMSDVTPIYFRPT 265 (714)
T ss_pred CChHHHHHHHHHHHHhCC-------CcEEEEeCchHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEeccc
Confidence 444467888888888832 3466789999999999999999999999999999999888889999999887643
Q ss_pred CCCCc----ccC-----HHHHHHhhcCC-----ceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEccccccc-c
Q 014603 165 PAKGW----EVD-----LDAVEALADEN-----TVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHL-A 229 (422)
Q Consensus 165 ~~~~~----~~d-----~~~l~~~~~~~-----~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~-~ 229 (422)
. +.+ .++ .+.+++.+..+ +..+++++|+. -|+++ ++++|+++|+.++ |++|||++.+ .
T Consensus 266 r-n~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pTY-dG~~y---d~~~I~~~~~~~~--ilvDEAwgah~~ 338 (714)
T PRK15400 266 R-NAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTY-DGLLY---NTDFIKKTLDVKS--IHFDSAWVPYTN 338 (714)
T ss_pred c-cccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECCCC-ccEec---CHHHHHHHhCCCC--EEEEccchhhhc
Confidence 2 122 234 78888877542 22688999965 88986 4677777777776 6899998754 2
Q ss_pred cCCCC--CCCccccC-CCCCeEEEecCccccCCCCceeEEE-EeeCCCCcccchhHHHHHHhhhhh--ccCcchHHHHHH
Q 014603 230 FGNTP--FVPMGVFG-SIVPVLTLGSISKRWIVPGWRLGWL-VTSDPNGILQDSGIVDSIKSFLNI--SSDPATFIQGAV 303 (422)
Q Consensus 230 ~~~~~--~~~~~~~~-~~~~~i~i~s~sK~~~~~G~r~G~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~a~ 303 (422)
|.... ..++.... .++.++++.|.+|. ++++..+.+ ...+ . .+ .++++..... +.+|+.+..+.+
T Consensus 339 F~p~~~~~sam~~ga~~~~~i~vtQStHKt--L~alTQaS~LHvkg-~--vd----~~~~n~a~~m~~STSPsY~l~ASL 409 (714)
T PRK15400 339 FSPIYEGKCGMSGGRVEGKVIYETQSTHKL--LAAFSQASMIHVKG-D--VN----EETFNEAYMMHTTTSPHYGIVAST 409 (714)
T ss_pred cCcccCCcChhhcCCCCCCceEEEEchhhc--ccchhHHhHHHHcC-C--CC----HHHHHHHHHHHcCCCcHHHHHHHH
Confidence 33211 11222111 12456999999998 456555543 3322 1 11 2444444332 335555554444
Q ss_pred HHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCC------CCCCCCCC-----------------------------Cc
Q 014603 304 PQILEKTEEEFFSKITDILRETADICCDRLKEIPC------ITCPKKPE-----------------------------GS 348 (422)
Q Consensus 304 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~------~~~~~~~~-----------------------------~g 348 (422)
..+........-++..+...+....+++.|.++++ +.++ .|+ +.
T Consensus 410 D~a~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~-~~~~~~~~~~w~~~p~~~whgf~~~~~~~~~lDP 488 (714)
T PRK15400 410 ETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVW-QPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDP 488 (714)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhCCCcccCceEEec-ChhhcccchhcccCccccccCcccccccccccCC
Confidence 44332211112233444455555556666655544 3322 111 00
Q ss_pred eEEEEecCcccc-----cCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEE--EEeccChHHHHHHHHHHHHHHH
Q 014603 349 MFVMVKLNYSLL-----EGINSDMEFALKLAKEESVIVLPGITVGLKDWLR--ITFAVEPSALEDGLGRMKAFYD 416 (422)
Q Consensus 349 ~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iR--is~~~~~~~l~~~~~~l~~~~~ 416 (422)
.=+.+.++.-.. +....+..+ ...|+++||.+.-... ..+- ++++.++++++.+++.|.++-+
T Consensus 489 ~Klti~tpgi~~~g~~~~~Gipg~~v-~~~L~e~gI~~E~~d~----~~iLfl~s~g~t~~~~~~L~~aL~~f~~ 558 (714)
T PRK15400 489 IKVTLLTPGMKKDGTMSDFGIPASIV-AKYLDEHGIVVEKTGP----YNLLFLFSIGIDKTKALSLLRALTDFKR 558 (714)
T ss_pred ceEEEEeCCCCCCccccccCCCHHHH-HHHHHHcCCEEEecCC----CeEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 111222221000 011134444 4445888999876542 3334 4445788999999998887644
No 366
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.61 E-value=2e-12 Score=127.44 Aligned_cols=306 Identities=14% Similarity=0.050 Sum_probs=176.9
Q ss_pred CCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeecc
Q 014603 85 STVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLL 164 (422)
Q Consensus 85 ~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~ 164 (422)
+...+.+.++.+|+.+++ ....++++|+|.++.+++.+++.+||.||++++||.+........|+.++++.-.
T Consensus 193 ~~G~i~eAe~~aA~~fgA-------d~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~~aLilsga~PVYl~P~ 265 (713)
T PRK15399 193 HTGPHLEAEEYIARTFGA-------EQSYIVTNGTSTSNKIVGMYAAPAGSTLLIDRNCHKSLAHLLMMSDVVPIWLKPT 265 (713)
T ss_pred CChHHHHHHHHHHHHhCC-------CcEEEEeCChHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeeEEeccc
Confidence 444567888888888842 3466789999999999999999999999999999999888888999998887633
Q ss_pred CCC-C--cccCH-----HHHHHhhcC-----CceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEE-EEcccccccc-
Q 014603 165 PAK-G--WEVDL-----DAVEALADE-----NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMV-IADEVYDHLA- 229 (422)
Q Consensus 165 ~~~-~--~~~d~-----~~l~~~~~~-----~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~l-i~D~~~~~~~- 229 (422)
.+. + ..++. +.+++.+.+ +++++++++|+. -|+++. +++|+++| |+.+ ++|||++.+.
T Consensus 266 ~n~~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pTY-dGi~yd---~~~I~~~~---g~~~ilvDEAhgah~~ 338 (713)
T PRK15399 266 RNALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNSTY-DGLLYN---TDWIKQTL---DVPSIHFDSAWVPYTH 338 (713)
T ss_pred ccccCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECCCC-CceeeC---HHHHHHHh---CCCEEEEeccchhhhh
Confidence 211 1 22344 788887753 236788999965 899965 55566666 5655 6999997532
Q ss_pred cCCCC--CCCcccc-CCCCCeEEEecCccccCCCCceeEE-EEeeCCCCcccchhHHHHHHhhhh--hccCcchHHHHHH
Q 014603 230 FGNTP--FVPMGVF-GSIVPVLTLGSISKRWIVPGWRLGW-LVTSDPNGILQDSGIVDSIKSFLN--ISSDPATFIQGAV 303 (422)
Q Consensus 230 ~~~~~--~~~~~~~-~~~~~~i~i~s~sK~~~~~G~r~G~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~ 303 (422)
|.... ..++... +.|..++++.|.+|. ++++..+. +...+ . .+ .++++.... .+.+|+.+..+.+
T Consensus 339 F~p~~~~~sam~~~~~aD~~i~~tQStHKt--L~alTQaS~iHvk~-~--vd----~~~~n~a~~m~~STSPsY~LmASL 409 (713)
T PRK15399 339 FHPIYQGKSGMSGERVPGKVIFETQSTHKM--LAAFSQASLIHIKG-E--YD----EETFNEAFMMHTSTSPSYPIVASV 409 (713)
T ss_pred cCcccCCcChhhCCCCCCeeeeeeeehhcc--ccccchheeeeecC-C--CC----HHHHHHHHHHHcCCCcHHHHHHHH
Confidence 33211 1122211 233345778999998 46665554 44432 1 21 244444433 2335555555444
Q ss_pred HHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCC------CCCCCCC-------------C----------------Cc
Q 014603 304 PQILEKTEEEFFSKITDILRETADICCDRLKEIPC------ITCPKKP-------------E----------------GS 348 (422)
Q Consensus 304 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~------~~~~~~~-------------~----------------~g 348 (422)
..+........-++..+...+....+++.+.++.+ +.++ .| . +.
T Consensus 410 D~a~~~m~~~~G~~l~~~~i~~a~~fR~~l~~~~~~~~~w~f~~~-~~~~~~~~~~w~l~p~~~whgf~~~~~~~~~lDP 488 (713)
T PRK15399 410 ETAAAMLRGNPGKRLINRSVERALHFRKEVQRLREESDGWFFDIW-QPENVDEAECWPVAPGEQWHGFKDADADHMFLDP 488 (713)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhccccccCceeeec-CccccCCccceecCCCcccccccccccccccCCC
Confidence 44332211112233334444444445555544332 2212 11 0 01
Q ss_pred eEEEEecCcc----cc-cCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEeccChHHHHHHHHHHHHHHHH
Q 014603 349 MFVMVKLNYS----LL-EGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALEDGLGRMKAFYDR 417 (422)
Q Consensus 349 ~~~~~~~~~~----~~-~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~l~~~~~~l~~~~~~ 417 (422)
.=+.+.++.- .. +.......+... |+++||.+.-...+. -.+-++++.++++++.+++.|.++-+.
T Consensus 489 ~KltI~t~g~~~~g~~~~~Gi~g~~l~~~-L~e~gI~~E~~d~~~--vL~l~s~g~t~~~~~~L~~aL~~f~~~ 559 (713)
T PRK15399 489 VKVTILTPGMDEQGNMSEEGIPAALVAKF-LDERGIVVEKTGPYN--LLFLFSIGIDKTKAMGLLRGLTEFKRA 559 (713)
T ss_pred ceEEEEecCcccccccccCCCCHHHHHHH-HHHcCCEEEecCCCe--EEEEeCCCCCHHHHHHHHHHHHHHHHh
Confidence 1112222210 00 111234445444 578899987654311 123344457889999999988876443
No 367
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.61 E-value=7e-13 Score=124.01 Aligned_cols=269 Identities=18% Similarity=0.147 Sum_probs=169.2
Q ss_pred HHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCC-----CCCEEEecCHHHHHHHHHHHhcC--------C
Q 014603 67 AVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLS-----PDDVYLTLGCTQAIEVILTVLAR--------P 133 (422)
Q Consensus 67 v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~-----~~~i~~~~g~~~a~~~~~~~l~~--------~ 133 (422)
+-+.+...++. ....|...+...++++.+.+++.+.+|.+.. ...=++|+|||+++..++.+..+ .
T Consensus 56 ~~~~l~~~~n~-n~~~~~~~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~ 134 (373)
T PF00282_consen 56 LADLLASALNQ-NGFTWEASPAATEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAK 134 (373)
T ss_dssp HHHHHHHHHT--BTTSTTTSHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhcc-cccccccccccccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhc
Confidence 34444555543 2334444445778999999999998876621 23567899999999877654321 1
Q ss_pred C-----C-EEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC---C--ce-EEEEeCCCCCcccccC
Q 014603 134 G-----A-NILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE---N--TV-ALVIINPGNPCGNVYT 201 (422)
Q Consensus 134 g-----d-~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~---~--~~-~i~i~~p~nptG~~~~ 201 (422)
| + .|++.+-+|+++..++...|++++.+|.++ ++.+|++.|++.+.+ + +. +++.+.++..+|.+
T Consensus 135 ~~~~~~~~~i~~s~~aH~S~~Kaa~~lGlg~~~I~~~~--~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~-- 210 (373)
T PF00282_consen 135 GVEEIPKPVIYVSEQAHYSIEKAARILGLGVRKIPTDE--DGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAI-- 210 (373)
T ss_dssp TTTHCSSEEEEEETTS-THHHHHHHHTTSEEEEE-BBT--TSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB--
T ss_pred ccccccccccccccccccHHHHhcceeeeEEEEecCCc--chhhhHHHhhhhhcccccccccceeeeccCCCcccccc--
Confidence 1 2 567777799999999999999999999875 457999999887643 2 23 45566678899999
Q ss_pred HHHHHHHHHHHHHcCcEEEEccccccccc-CCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchh
Q 014603 202 YQHLQKIAETAKKLGIMVIADEVYDHLAF-GNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSG 280 (422)
Q Consensus 202 ~~~l~~i~~~~~~~~~~li~D~~~~~~~~-~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~ 280 (422)
+++++|.++|+++|+++++|.+|++..+ ..........++.. .-+..+++|++ .....+|+++.+++..
T Consensus 211 -D~l~~i~~i~~~~~~wlHVDaA~gg~~~~~~~~~~~~~gi~~a--dSit~d~HK~l-~~P~~~~~~l~r~~~~------ 280 (373)
T PF00282_consen 211 -DPLEEIADICEKYNIWLHVDAAYGGSALLSPEYRHLLFGIERA--DSITIDPHKWL-GVPYGCGVLLVRDKSD------ 280 (373)
T ss_dssp --SHHHHHHHHHHCT-EEEEEETTGGGGGGHCTTGGGGTTGGGE--SEEEEETTTTT-S-SSS-EEEEESSGGG------
T ss_pred -cCHHHHhhhccccceeeeecccccccccccccccccccccccc--cccccchhhhh-cCCccceeEEeecccc------
Confidence 8999999999999999999999987322 11111111222211 14455899995 4556799999976421
Q ss_pred HHHHHH---hhh--------------hhccCcch-HHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC
Q 014603 281 IVDSIK---SFL--------------NISSDPAT-FIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCP 342 (422)
Q Consensus 281 ~~~~~~---~~~--------------~~~~~~~~-~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 342 (422)
+...+. .+. ..+...+. .....+-..|+....+.+.+..++..+.++++.+.|++.+.++++
T Consensus 281 l~~~~~~~~~Yl~~~~~~~~~~~~~~~~tl~~SR~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~ 360 (373)
T PF00282_consen 281 LRDAFSINADYLGNDDRESDESYDYGDYTLQGSRRFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELV 360 (373)
T ss_dssp HHGGGEEEETCTT-S-SSS-GGGCEEEGSSSSSGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEES
T ss_pred hHHHhccChhhhcccccccccccccccccccccccchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEE
Confidence 111110 000 01112222 122222233444456788889999999999999999999888866
Q ss_pred CCCCCceE
Q 014603 343 KKPEGSMF 350 (422)
Q Consensus 343 ~~~~~g~~ 350 (422)
..|.-+..
T Consensus 361 ~~~~~~~v 368 (373)
T PF00282_consen 361 NEPDLNIV 368 (373)
T ss_dssp STTSSSEE
T ss_pred cCCCceEE
Confidence 55554433
No 368
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.60 E-value=1.3e-12 Score=133.74 Aligned_cols=298 Identities=16% Similarity=0.134 Sum_probs=188.0
Q ss_pred CCcHHHHHHHHHHhhCCCCCCCCCCC-----C----CHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHh-c
Q 014603 62 RTASVAVDAIVHSVRSARFNCYSSTV-----G----ILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVL-A 131 (422)
Q Consensus 62 ~~~~~v~~a~~~~~~~~~~~~y~~~~-----g----~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l-~ 131 (422)
..|+.+.+++.+... ....|.|.+ | +.+++..|++++ +.+++++.++.++|++.++++.++ .
T Consensus 116 ~~P~~v~~~i~~~~~--~~TaytPYqaEisQG~lqal~~~Qt~ia~Lt------G~~~anaSL~d~aTAaaea~~~a~~~ 187 (993)
T PLN02414 116 HVPPVILRNILENPG--WYTQYTPYQAEIAQGRLESLLNYQTMITDLT------GLPMSNASLLDEGTAAAEAMAMCNNI 187 (993)
T ss_pred cCCHHHHHHHHhChH--HHhhcCCCchHHHHHHHHHHHHHHHHHHHHh------CCChhhEeecCChHHHHHHHHHHHhc
Confidence 356677677765432 123455432 2 456778888888 678999999999999999988776 3
Q ss_pred CC--CCEEEecCCCccchHH----HHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHH
Q 014603 132 RP--GANILLPRPGFPYYEA----RATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHL 205 (422)
Q Consensus 132 ~~--gd~Vl~~~~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l 205 (422)
.+ +++|++++..|+.+.. .++..|++++.++.... + ...+....+++..|+ .+|.+ .++
T Consensus 188 ~~g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~~-----~------~~~~~v~~vlvq~P~-~~G~v---~dv 252 (993)
T PLN02414 188 LKGKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKDF-----D------YSSGDVCGVLVQYPA-TDGEV---LDY 252 (993)
T ss_pred ccCCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchhh-----c------cccCceEEEEEecCC-CCeEE---cCH
Confidence 43 3789999999987644 34456888888775321 1 112233344444444 49999 578
Q ss_pred HHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCcccc---CCCCceeEEEEeeCCCCcccchhHH
Q 014603 206 QKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRW---IVPGWRLGWLVTSDPNGILQDSGIV 282 (422)
Q Consensus 206 ~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~---~~~G~r~G~~~~~~~~~~~~~~~~~ 282 (422)
++|+++|+++|+++++ .++.. ...+ ..+...++.| +++++..|+. |..|.+.|++.+++ ++.
T Consensus 253 ~~I~~~ah~~GaL~iV-aad~l-al~~--l~~pge~GAD---i~vgsgqKwg~P~G~GGP~aGflavr~--------~~~ 317 (993)
T PLN02414 253 AEFVKNAHANGVKVVM-ATDLL-ALTM--LKPPGEWGAD---IVVGSAQRFGVPMGYGGPHAAFLATSQ--------EYK 317 (993)
T ss_pred HHHHHHHHHcCCEEEE-EECHH-HhcC--CCCHhhccCc---EEEECCCccccCCCCCCCCeeEEEECH--------HHH
Confidence 9999999999999999 44432 1111 1134566665 8899999985 12455689998864 222
Q ss_pred HHHHh-------------------------hhhhccCcchHHHHHHHHHHh-----hchHHHHHHHHHHHHHHHHHHHHH
Q 014603 283 DSIKS-------------------------FLNISSDPATFIQGAVPQILE-----KTEEEFFSKITDILRETADICCDR 332 (422)
Q Consensus 283 ~~~~~-------------------------~~~~~~~~~~~~~~a~~~~l~-----~~~~~~~~~~~~~~~~~~~~l~~~ 332 (422)
+.+.. .+.-..+.+.-...++.+.+. .....++++..+++.++..++.+.
T Consensus 318 r~~PgriVG~s~d~~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~ 397 (993)
T PLN02414 318 RLMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAG 397 (993)
T ss_pred hhCCCcccCcccCCCCCcccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHH
Confidence 22210 000012333322223333222 222466888889999999999999
Q ss_pred hhcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHH
Q 014603 333 LKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGR 410 (422)
Q Consensus 333 L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~ 410 (422)
|+.. ++.+...+..+ .+.++++ +..++..++ .++||.+.... .+.+|+|++ ++++||+.+++.
T Consensus 398 L~~~-G~~~~~~~~f~-~vt~~~~--------~~~~v~~~L-~~~gI~l~~~~----~~~lrvs~~e~~T~edId~L~~~ 462 (993)
T PLN02414 398 LKKL-GFQVQSLPFFD-TVKVKCS--------DADAIADAA-AKVGINLRVVD----ANTVTVSFDETTTLEDVDKLFKV 462 (993)
T ss_pred Hhhc-CCccCCCCCcC-eEEEecC--------CHHHHHHHH-HHCCCeeEEec----CCeEEEEeeccCCHHHHHHHHHH
Confidence 9885 67744222222 2233332 356666666 55699776432 467999998 789999999999
Q ss_pred HH
Q 014603 411 MK 412 (422)
Q Consensus 411 l~ 412 (422)
|.
T Consensus 463 l~ 464 (993)
T PLN02414 463 FA 464 (993)
T ss_pred Hc
Confidence 86
No 369
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.57 E-value=5.7e-12 Score=109.26 Aligned_cols=340 Identities=14% Similarity=0.076 Sum_probs=214.4
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCC---CCC-CCCCCCC-HHHHHHHHHHHhhcCCCCCCCCCEEEec
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSAR---FNC-YSSTVGI-LPARRAIADYLNRDLPYKLSPDDVYLTL 117 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~---~~~-y~~~~g~-~~lr~~ia~~l~~~~~~~~~~~~i~~~~ 117 (422)
.+.++|.|+.+.....+. ....+..++..+...... .+. -.+-..+ ..+-.+++-++ +..+.+++++.
T Consensus 28 lp~~viyLdgnSLGa~p~-~~~a~~~q~a~deW~~~lirsw~~a~~~W~~lp~~lgdklApLi------GA~~~Evvv~d 100 (407)
T COG3844 28 LPGGVIYLDGNSLGARPR-AVTARLQQVATDEWGEGLIRSWNKAKADWFDLPERLGDKLAPLI------GARAGEVVVTD 100 (407)
T ss_pred CCCCeEEeeccccccCch-HHHHHHHHHHHHHHHhhhhhhhcccCCchhhchhHHHHHhhhhh------cCCCCceEEeC
Confidence 578899999887442110 012223333333333321 111 1111111 23344555555 45778999999
Q ss_pred CHHHHHHHHHHHhc--CCCCEEEecCCCccch-----HHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEe
Q 014603 118 GCTQAIEVILTVLA--RPGANILLPRPGFPYY-----EARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVII 190 (422)
Q Consensus 118 g~~~a~~~~~~~l~--~~gd~Vl~~~~~~~~~-----~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~ 190 (422)
+++-.++.++.+.. ++|++|++++-.-.+. ...+...+... . -...+.++.+++.+++++.+++++
T Consensus 101 tts~nl~k~L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~~---~----~~~~~~P~~~~~~~~dd~AvV~L~ 173 (407)
T COG3844 101 TTSINLFKVLAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADLLGIGY---D----LEGVIAPRALEEAITDDVAVVLLS 173 (407)
T ss_pred CcchHHHHHHHHHhccCCCceEEeecCCCCCcchhhhcchhhhhcccc---c----ceeeeChHHHHHhhccceEEEEec
Confidence 99999998887764 3578888876544332 22333333221 1 112346778999999899889999
Q ss_pred CCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCcccc-CCCCceeEEEEe
Q 014603 191 NPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRW-IVPGWRLGWLVT 269 (422)
Q Consensus 191 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~-~~~G~r~G~~~~ 269 (422)
+.+.-||..+ ++.+|-++++++|++++.|-+|+. |.-+..+..-+.| +-|++..|.+ ++||-..|..+.
T Consensus 174 ~V~y~TGql~---dm~aiT~~AH~~galv~wDLAHsa----Gavp~~Lh~~gaD---faigcsyKYLNgGPGapa~l~v~ 243 (407)
T COG3844 174 HVNYKTGQLL---DMRAITALAHQHGALVGWDLAHSA----GAVPVDLHAAGAD---FAIGCSYKYLNGGPGAPAGLFVA 243 (407)
T ss_pred ccccccccee---eHHHHHHHHHhcCceEEeehhccc----CCcceeecccCCC---eeeeeeceeccCCCCCceeEEec
Confidence 9999999995 788999999999999999999987 4334445555554 8899999988 457766655554
Q ss_pred eCCCCcccchhHHHHHH------------hh----hhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHh
Q 014603 270 SDPNGILQDSGIVDSIK------------SF----LNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRL 333 (422)
Q Consensus 270 ~~~~~~~~~~~~~~~~~------------~~----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L 333 (422)
+++.+.. -+.+...+. .. ....++++..+..++..+|+...+-.+.+++++--.+.+++.+.+
T Consensus 244 ~~h~e~~-~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aLDifa~~~i~~lR~kSlaLTd~fieLv 322 (407)
T COG3844 244 PRHRERS-WPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGALDIFADVDITELRKKSLALTDYFIELV 322 (407)
T ss_pred ccccccc-ccccccccCCCCcchhhhccCcCccccceeeCCcchhhhHHHhhhhhhhhhcCHHHHHHhhhHHHHHHHHHH
Confidence 4322111 111111111 00 012346666777777777876555558888888888889998888
Q ss_pred hcC-C--CCCCCCCCCC----ceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec---cChHH
Q 014603 334 KEI-P--CITCPKKPEG----SMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA---VEPSA 403 (422)
Q Consensus 334 ~~~-~--~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~---~~~~~ 403 (422)
+.. + +++ +.+|.+ |..+.+..| ...+++..| -++||.. .|..++.+|+.++ ++-+|
T Consensus 323 Ea~~~~~~l~-l~tPr~~~~rGsqvS~~hp--------~~~~V~qaL-i~rGVig----D~R~P~vlRfgftPlY~~~~D 388 (407)
T COG3844 323 EARCEYYGLT-LVTPRAHEERGSQVSLYHP--------HGYQVMQAL-IDRGVIG----DFREPDVLRFGFTPLYVSFVD 388 (407)
T ss_pred HhccccCCcE-EeccchhhhccceeeEecC--------cHHHHHHHH-HHcCccc----cccCCCeeeecCccceechhH
Confidence 764 2 344 224432 456666565 356666666 5569874 3445789999998 67899
Q ss_pred HHHHHHHHHHHHHHhccc
Q 014603 404 LEDGLGRMKAFYDRHAKK 421 (422)
Q Consensus 404 l~~~~~~l~~~~~~~~~~ 421 (422)
+=.+++.|.++++...-|
T Consensus 389 Vw~AV~~L~evL~t~a~~ 406 (407)
T COG3844 389 VWDAVDALEEVLDTLAWQ 406 (407)
T ss_pred HHHHHHHHHHHHHhhccC
Confidence 999999999999876544
No 370
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=99.55 E-value=4e-13 Score=114.82 Aligned_cols=356 Identities=13% Similarity=0.093 Sum_probs=210.8
Q ss_pred HHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCC-CCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCE
Q 014603 35 LLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFN-CYSSTVGILPARRAIADYLNRDLPYKLSPDDV 113 (422)
Q Consensus 35 ~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~-~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i 113 (422)
-+++.....+..++|-=++... .-..+|+|.+|...++.....+ ++-. .++- ..|+.+....+ .-+-+
T Consensus 37 q~QYmfDE~g~~yLDCInNVaH---vghchp~VV~A~~kQmat~~tN~RFlh----d~lv-~cA~~l~stlP---eLsvc 105 (452)
T KOG1403|consen 37 QGQYMFDEEGTRYLDCINNVAH---VGHCHPEVVRAGAKQMATISTNNRFLH----DELV-QCARTLTSTLP---ELSVC 105 (452)
T ss_pred ccceeeccCcccHHHHhhhhhh---cccCCHHHHHHHHHHHhHhcccchhhH----HHHH-HHHHHHhhcCC---CceEE
Confidence 3344433345555543333222 1256899999999888653222 2221 2332 23333333222 24567
Q ss_pred EEecCHHHHHHHHHHHh---cCCCCEEEecCCCccchHHHHhhC-------C---CeEEEeeccCCCC------------
Q 014603 114 YLTLGCTQAIEVILTVL---ARPGANILLPRPGFPYYEARATHS-------H---LEVRHFDLLPAKG------------ 168 (422)
Q Consensus 114 ~~~~g~~~a~~~~~~~l---~~~gd~Vl~~~~~~~~~~~~~~~~-------g---~~~~~~~~~~~~~------------ 168 (422)
+|+++|++|+.++++.. ++..|.| +.+..|++........ | .++.++.+.|..+
T Consensus 106 ~F~NSGSEANDLALRLAR~ftkhqDvI-tldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~~~~~ 184 (452)
T KOG1403|consen 106 FFVNSGSEANDLALRLARNFTKHQDVI-TLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRDKMYP 184 (452)
T ss_pred EEecCCchhhHHHHHHHHhhcccCceE-EEechhccceeeeeeccceeccCCCCcCCCceeEecCCccccccccccccCC
Confidence 89999999999998764 4555554 4455555432211100 1 1112222211100
Q ss_pred ----cccCHHHHHHhh----cCC-ceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCC
Q 014603 169 ----WEVDLDAVEALA----DEN-TVALVIINP-GNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVP 237 (422)
Q Consensus 169 ----~~~d~~~l~~~~----~~~-~~~i~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~ 237 (422)
...-.+.+++.+ .++ ..+.++... +.-.|.+ +|....+++++..+.+|-+.|.||++.++.+-|..++.
T Consensus 185 ~a~~~~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGRvG~hyWa 264 (452)
T KOG1403|consen 185 DADMGALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGRVGSHYWA 264 (452)
T ss_pred cccchhhhhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcccccchhhhh
Confidence 001112333333 222 233344444 6667765 45566899999999999999999999999888888877
Q ss_pred ccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhh---hhccCcchHHHHHHHHHHhhchHHH
Q 014603 238 MGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL---NISSDPATFIQGAVPQILEKTEEEF 314 (422)
Q Consensus 238 ~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~a~~~~l~~~~~~~ 314 (422)
+..++.-++++.+ .|. ++.|.+++.+++. +++.+.+.... ..+.+.++++.+++.+.|+...++.
T Consensus 265 fq~y~fiPDIVtm---gKp-mGNGhPVa~Vatt--------keIA~Af~atgv~YFNTyGGnPVsCAv~laVm~v~e~E~ 332 (452)
T KOG1403|consen 265 FQTYNFIPDIVTM---GKP-MGNGHPVAAVATT--------KEIAQAFHATGVEYFNTYGGNPVSCAVGLAVMRVCEDEN 332 (452)
T ss_pred hhhhccccchhee---ccc-CCCCCeeeEEecc--------HHHHHHhccccceehhccCCCchhHHHHHHHHHHHhhhh
Confidence 7766654444554 599 6899999999885 57888887633 1245789999999999998766666
Q ss_pred HHHHHHHHHHHHHHHHHHhhc-CCCCCCCCCCCCceEEEEecCcccc---cCCCCHHHHHHHHHHhcCeEEecCCCCCCC
Q 014603 315 FSKITDILRETADICCDRLKE-IPCITCPKKPEGSMFVMVKLNYSLL---EGINSDMEFALKLAKEESVIVLPGITVGLK 390 (422)
Q Consensus 315 ~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~ 390 (422)
+.+...++.+..+.+...++. ++.+. . ...-|.|+.+.+-.... +....+...+.++-+.++|++..-.. + .
T Consensus 333 Lq~ha~~vG~~L~~lL~~~k~kh~~IG-D-vRGvGLFiGIdLVkD~~tRtP~tk~A~~~v~rlke~y~VLlsaDGP-h-~ 408 (452)
T KOG1403|consen 333 LQEHAQQVGEKLEVLLRRLKQKHECIG-D-VRGVGLFIGIDLVKDRKTRTPDTKEAHWVVNRLKELYRVLLSADGP-H-R 408 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcccee-c-cccceEEEeeeeecccccCCCcHHHHHHHHHHHHHhhhEEEecCCC-C-C
Confidence 777777666666666655554 33332 1 12336777776532111 11113444566676777888865321 1 4
Q ss_pred CeEEEEec--cChHHHHHHHHHHHHHHHHh
Q 014603 391 DWLRITFA--VEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 391 ~~iRis~~--~~~~~l~~~~~~l~~~~~~~ 418 (422)
+.+.|-+. .++++.++.+..|.+++..+
T Consensus 409 NilKiKPPmCFneena~e~v~~ld~iLT~m 438 (452)
T KOG1403|consen 409 NILKIKPPMCFNEENADEFVLGLDEILTVM 438 (452)
T ss_pred ceeecCCCcccChhhHHHHHHHHHHHHHHH
Confidence 66777664 57888888888888877644
No 371
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=99.54 E-value=1.1e-11 Score=112.66 Aligned_cols=306 Identities=17% Similarity=0.144 Sum_probs=197.6
Q ss_pred CCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHh---c-C-CC---CEEEecCCCccchHHHHhhCCCeE
Q 014603 87 VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVL---A-R-PG---ANILLPRPGFPYYEARATHSHLEV 158 (422)
Q Consensus 87 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l---~-~-~g---d~Vl~~~~~~~~~~~~~~~~g~~~ 158 (422)
++..+++.++..++...++-+ ....=..|.|+|+++.++-... . . .| ..++++...+.++..++..+++++
T Consensus 116 p~~~~~e~~~Vnm~~~L~~~~-~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a~eK~a~yf~v~l 194 (491)
T KOG1383|consen 116 PVVRKLEAECVNMIANLFNAP-SDSCGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAAFEKAARYFEVEL 194 (491)
T ss_pred chhHHHHHHHHHHHHHHhcCC-ccccCccccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHHHHHHHHhhEEEEE
Confidence 456778888877777655423 1122256788888855443321 1 1 22 478889999999999999999999
Q ss_pred EEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHH-cCcEEEEcccccccccCCCCCCC
Q 014603 159 RHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKK-LGIMVIADEVYDHLAFGNTPFVP 237 (422)
Q Consensus 159 ~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~-~~~~li~D~~~~~~~~~~~~~~~ 237 (422)
+.+++++ +++.+|+..+.+.+++++..++.+-|+.|+|.. +++++|.++..+ +++.+.+|.+-++|.-. -....
T Consensus 195 ~~V~~~~-~~~~~D~~k~~~~i~eNti~lv~~~~~~p~G~~---e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p-~~~~~ 269 (491)
T KOG1383|consen 195 REVPLDE-GDYRVDPGKVVRMIDENTIMLVGSLPNFPTGEI---EDVEKLADLLLEIWDIPIHVDACLGGFINP-AGYLN 269 (491)
T ss_pred Eeeeccc-cceEecHHHHHHHhccceEEEEEEcCCCCccch---hhHHHHHHHHHHHhCCceeecccCcccccc-ccccC
Confidence 9999976 678999999999999999999999999999999 999999999988 99999999998876642 01111
Q ss_pred ccccCCC-CCe-EEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHh----------hhhhc-cCcc--hHHHHH
Q 014603 238 MGVFGSI-VPV-LTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKS----------FLNIS-SDPA--TFIQGA 302 (422)
Q Consensus 238 ~~~~~~~-~~~-i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~----------~~~~~-~~~~--~~~~~a 302 (422)
...++.. +.| -+-.+.+|. |+.--.++|++-+++... ..++.- ..... +.+. ...|++
T Consensus 270 ~~~fdFr~p~V~Sisa~~HKY-Gl~~~G~~~vl~r~k~~~------~~q~~~~~~w~Gg~y~s~TlngSR~g~~va~~wa 342 (491)
T KOG1383|consen 270 EEEFDFRVPGVTSISADGHKY-GLAPAGSSWVLYRNKELL------PHQLFFHTDWLGGIYASPTLNGSRPGSQVAAQWA 342 (491)
T ss_pred ccccccCCCCceeEeecccee-eeeecCcEEEEEcccccc------cceEEEeccccCccccCcccccCCcccHHHHHHH
Confidence 1122221 122 222355675 654444899988764321 122110 00011 1111 122333
Q ss_pred HHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEe
Q 014603 303 VPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVL 382 (422)
Q Consensus 303 ~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~ 382 (422)
. .+ ...++++.+..+.+.+....+++.++++.++.++..|.-+ + +-+....+ +-.++ ..+++++|..+.
T Consensus 343 ~--~~-~lG~eGY~~~~~~ive~~~~l~egie~i~~i~i~gkp~vs-~--~~~~s~~~----~i~el-sd~l~~~GW~ln 411 (491)
T KOG1383|consen 343 A--LM-SLGEEGYRENTQNIVETARKLREGIENIKGIKIVGKPLVS-F--ILFGSNDV----NIFEL-SDLLRKKGWILN 411 (491)
T ss_pred H--HH-HhhHHHHHHHHHHHHHHHHHHHHhhhccccceecCCCcEE-E--EEccCCcc----chhhh-hHHHHhcCcCcc
Confidence 2 22 2345677778888999999999999999888855454422 2 22222211 23344 445677788775
Q ss_pred cCCCCCCCCeEEEEec---cChHHHHHHHHHHHHHHHHhc
Q 014603 383 PGITVGLKDWLRITFA---VEPSALEDGLGRMKAFYDRHA 419 (422)
Q Consensus 383 ~g~~~~~~~~iRis~~---~~~~~l~~~~~~l~~~~~~~~ 419 (422)
.-.. +..+-+++. ..++-.++++..|+++++++.
T Consensus 412 alq~---P~a~Hi~vt~~~~~~~~A~~~v~Di~~~~~el~ 448 (491)
T KOG1383|consen 412 ALQF---PAAIHICVTRVHAREDVADRFVADIRKVVEELK 448 (491)
T ss_pred ccCC---CCceEEEEEeeeccHHHHHHHHHHHHHHHHHHH
Confidence 4332 224555554 344556888888888888764
No 372
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.48 E-value=7.5e-11 Score=111.81 Aligned_cols=236 Identities=15% Similarity=0.147 Sum_probs=151.9
Q ss_pred CCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCC
Q 014603 87 VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPA 166 (422)
Q Consensus 87 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 166 (422)
..+.+.++.+|+.+++ ....++++|++.|+..++.+++.+||.||++.+||.+........|+.++++.-..+
T Consensus 70 G~i~eAqe~aA~~fgA-------d~tyFvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~~glilaGa~Pvyl~p~~n 142 (557)
T COG1982 70 GPIKEAQELAARVFGA-------DHTYFVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIHHGLILAGATPVYLEPSRN 142 (557)
T ss_pred ccHHHHHHHHHHHhCC-------CceEEEECCccHHHHHHHHhhcCCCCEEEecCCccHHHHHHHHHcCCceEEecCCCC
Confidence 4467888888888842 236788999999999999999999999999999999988888889988877754332
Q ss_pred C----CcccCHHHHHHhhcC--Cc-eEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCcc
Q 014603 167 K----GWEVDLDAVEALADE--NT-VALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMG 239 (422)
Q Consensus 167 ~----~~~~d~~~l~~~~~~--~~-~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~ 239 (422)
. -.+++.+.+++.+.+ .. +++++++|+. -|+++. +++|.+.++.+++++.+|+++.... +-+...+-.
T Consensus 143 p~~gi~ggI~~~~~~~~l~~~~~~~k~~vitnpTY-dGv~~n---~~~i~~~~~~~~a~v~~deah~~~~-~~~~~l~~~ 217 (557)
T COG1982 143 PLYGIIGGIPLETFKEALLAHPDAEKLAVITNPTY-DGVCYN---LRKIVELLHHYGAWVLYDEAHPAHF-DFSPMLPES 217 (557)
T ss_pred ccccccCCCCHHHHHHHHHhChhhheeEEEecCcc-ceEeec---HHHHHHHHhhcCceEEhhhcCcccc-cccccCcch
Confidence 2 146789999886533 33 7788999987 788864 6677777779999999999987532 111111111
Q ss_pred ccCCCCCeEEEecCccccCCCCcee-EEEEeeCCCCcccchhHHHHHHhhhhh--ccCcchHHHHHHHHH---HhhchHH
Q 014603 240 VFGSIVPVLTLGSISKRWIVPGWRL-GWLVTSDPNGILQDSGIVDSIKSFLNI--SSDPATFIQGAVPQI---LEKTEEE 313 (422)
Q Consensus 240 ~~~~~~~~i~i~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~a~~~~---l~~~~~~ 313 (422)
.. ....++++.|.+|.+ +++.. .++...+. ... -.+++...... +.+|+....+.+..+ .......
T Consensus 218 ~~-~~~~~~~tqS~HK~l--~alSQaS~iHv~~~-~~~----~~~r~nea~~~h~STSPsY~l~ASlD~Ar~~~~~~G~~ 289 (557)
T COG1982 218 AL-NGGADFVTQSTHKLL--AALSQASMIHVKDG-RAV----NHERFNEALMMHQSTSPSYPLMASLDVARMQEGNAGRE 289 (557)
T ss_pred hh-hcCceEEEechhhhh--hhhhhhHHHhhCCC-ccC----CHHHHHHHHHHHccCCchHHHHHHHHHHHHhhhhhhHH
Confidence 11 123468999999983 44444 44554432 111 23445444432 234444444433332 1111122
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCCC
Q 014603 314 FFSKITDILRETADICCDRLKEIPCITCP 342 (422)
Q Consensus 314 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 342 (422)
..++..+..-+.++.+++...+++++.++
T Consensus 290 l~~~~~~~~i~~r~~~~~~~~~~~~~~~~ 318 (557)
T COG1982 290 LWQEVIDEAIDFRKALRRLINEIGFFPVL 318 (557)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCeeec
Confidence 23333455556666666666666555544
No 373
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.46 E-value=7.3e-11 Score=103.93 Aligned_cols=332 Identities=14% Similarity=0.121 Sum_probs=203.3
Q ss_pred CcHHHHHHHHHHhhCCCCCCC------CCCCCCHHHHHHHHHHHhhcCCCCCCCC--CEEE-ecCHHHHHHHHHHHhcCC
Q 014603 63 TASVAVDAIVHSVRSARFNCY------SSTVGILPARRAIADYLNRDLPYKLSPD--DVYL-TLGCTQAIEVILTVLARP 133 (422)
Q Consensus 63 ~~~~v~~a~~~~~~~~~~~~y------~~~~g~~~lr~~ia~~l~~~~~~~~~~~--~i~~-~~g~~~a~~~~~~~l~~~ 133 (422)
.+..|.+|+-..+.+...-+| +-...+.+++..+.+..-+.++ .+++ .|-+ .-+++.|+.++..++++|
T Consensus 52 ts~aVmeAlGS~ltNKYSEGyPG~RYYGGne~ID~iE~LCq~RALeaF~--ldp~kWGVNVQp~SGSPANfavYtall~P 129 (477)
T KOG2467|consen 52 TSRAVMEALGSCLTNKYSEGYPGARYYGGNEYIDQIELLCQKRALEAFG--LDPEKWGVNVQPYSGSPANFAVYTALLKP 129 (477)
T ss_pred hHHHHHHHHhHHhhcccccCCCcccccCcchHHHHHHHHHHHHHHHHhC--CCHHHCceeeccCCCCchhhHHHhhhcCC
Confidence 457888998888876433333 3334455555544444433343 3333 3322 235677899999999999
Q ss_pred CCEEEe---cCCCc--cchHHHHhhCCCeE-----EEeeccCCCCcccCHHHHHHhhc-CCceEEEEeCCCCCcccccCH
Q 014603 134 GANILL---PRPGF--PYYEARATHSHLEV-----RHFDLLPAKGWEVDLDAVEALAD-ENTVALVIINPGNPCGNVYTY 202 (422)
Q Consensus 134 gd~Vl~---~~~~~--~~~~~~~~~~g~~~-----~~~~~~~~~~~~~d~~~l~~~~~-~~~~~i~i~~p~nptG~~~~~ 202 (422)
+++|.- |+.+| ++|..-.+...+.- -++.+++.. .-+|-|.||+... =++++++ +- +..|++
T Consensus 130 h~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~~T-G~IDYD~Le~~A~~frPk~ii-aG-----~SaY~R 202 (477)
T KOG2467|consen 130 HERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDPST-GYIDYDKLEKTATLFRPKLII-AG-----TSAYSR 202 (477)
T ss_pred CCeeeeccCCCCCccccccccCCceeeeeeeecccCceeeCCCC-CceehHHHHHHHHhcCCcEEE-ec-----cccchh
Confidence 998874 44444 33322112211111 123344443 4579999988543 3666665 22 223333
Q ss_pred H-HHHHHHHHHHHcCcEEEEccccc-ccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCccc---
Q 014603 203 Q-HLQKIAETAKKLGIMVIADEVYD-HLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQ--- 277 (422)
Q Consensus 203 ~-~l~~i~~~~~~~~~~li~D~~~~-~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~--- 277 (422)
. |..++.++|.+.|.+++.|.+|- ++.-.+..+.++...+ |+..+.+|+ +.|.|.|.+..+..-.-.+
T Consensus 203 ~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFey~D-----iVTTTTHKs--LRGPRg~mIFyRkGvk~~~~k~ 275 (477)
T KOG2467|consen 203 LIDYARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFEYCD-----IVTTTTHKS--LRGPRGAMIFYRKGVKSIKPKQ 275 (477)
T ss_pred hccHHHHHHHHHhcCceeehhhhhHHHHHhcccCCCcccccc-----eeecccccc--ccCCcceeEEEeccCCcCCCCC
Confidence 2 46888888889999999999984 4444454444443322 788899998 5788889888764211110
Q ss_pred ----chhHHHHHHhhh--hhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEE
Q 014603 278 ----DSGIVDSIKSFL--NISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFV 351 (422)
Q Consensus 278 ----~~~~~~~~~~~~--~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~ 351 (422)
--++.+++.... ...++|......+++.+|.+.....+....+++.++.+.+.++|.+. |..++....+...+
T Consensus 276 g~~i~ydlE~kINfaVFP~lQGGPHNhtIaalAvALkQa~tpefk~Yq~qV~~Nakala~~l~~~-Gy~lvtgGTDnHlv 354 (477)
T KOG2467|consen 276 GKEILYDLEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKEYQKQVLKNAKALASALISR-GYKLVTGGTDNHLV 354 (477)
T ss_pred CCcceechhhhhhhhccccccCCCCcchHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHc-CceEecCCccceEE
Confidence 012334443322 23457777778888888887666778888899999999999999998 77755444445556
Q ss_pred EEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC-----CCeEEEEec--c----ChHHHHHHHHHHHHHHH
Q 014603 352 MVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL-----KDWLRITFA--V----EPSALEDGLGRMKAFYD 416 (422)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~-----~~~iRis~~--~----~~~~l~~~~~~l~~~~~ 416 (422)
++.+..... +...+++.|+.-+|.+.--.-++. ++.+||... + -++|+++..+-|.++++
T Consensus 355 LvDLr~~G~-----dGarvE~vle~~~I~~NKNtvpGD~Sal~PgGiRiGtPAmTsRG~~e~df~~v~~fi~~av~ 425 (477)
T KOG2467|consen 355 LVDLRPKGV-----DGARVEKVLELCHIALNKNTVPGDKSALSPGGIRIGTPAMTSRGFGEEDFEKVADFIDRAVK 425 (477)
T ss_pred EEeccccCC-----chHHHHHHHHHhhhhhcCCcCCCCccccCCCceeccchhhcccCccHHHHHHHHHHHHHHHH
Confidence 666654322 334456666666676554333332 678999874 2 36788888887776653
No 374
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=99.46 E-value=4.5e-10 Score=110.09 Aligned_cols=256 Identities=14% Similarity=0.096 Sum_probs=157.3
Q ss_pred cHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcC---------C-
Q 014603 64 ASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLAR---------P- 133 (422)
Q Consensus 64 ~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~---------~- 133 (422)
++.+...+....-+.....|...+....+++.+.+++.+.+|.+. ..=.||+|||.|+..++..... .
T Consensus 96 ~paila~~~a~~~N~n~~~~e~SP~~t~lE~~vi~~la~l~G~~~--~~G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~~ 173 (608)
T TIGR03811 96 MPAILAYNYAMLWNGNNVAYESSPATSQMEEEVGKEFATLMGYKN--GWGHIVADGSLANLEGLWYARNIKSLPFAMKEV 173 (608)
T ss_pred HHHHHHHHHHHHhCCCCCccccCchHHHHHHHHHHHHHHHhCCCC--CCeEEeCChHHHHHHHHHHHHHhhhccchhhhc
Confidence 445544443333333333454455678899999999998877653 3344788888887765433211 0
Q ss_pred ------------------------------------------C------CEEEecCCCccchHHHHhhCCCe---EEEee
Q 014603 134 ------------------------------------------G------ANILLPRPGFPYYEARATHSHLE---VRHFD 162 (422)
Q Consensus 134 ------------------------------------------g------d~Vl~~~~~~~~~~~~~~~~g~~---~~~~~ 162 (422)
| -+|+++...|+++..++...|++ ++.+|
T Consensus 174 ~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~ilGlG~~~vv~Vp 253 (608)
T TIGR03811 174 KPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAADIIGIGLDQVIPVP 253 (608)
T ss_pred cccccccccchhhcccccccccccccccccchhhhhhhccccccccccceEEEECCCccHHHHHHHHHcCCCcccEEEee
Confidence 0 05788888899999999999985 77888
Q ss_pred ccCCCCcccCHHHHHHhhcC----C-c-eEEEEeCCCCCcccccCHHHHHHHHHHH---HHcCc--EEEEcccccccc--
Q 014603 163 LLPAKGWEVDLDAVEALADE----N-T-VALVIINPGNPCGNVYTYQHLQKIAETA---KKLGI--MVIADEVYDHLA-- 229 (422)
Q Consensus 163 ~~~~~~~~~d~~~l~~~~~~----~-~-~~i~i~~p~nptG~~~~~~~l~~i~~~~---~~~~~--~li~D~~~~~~~-- 229 (422)
++ +++.+|++.|++.+.+ + + -+|+.+.++..+|.+ +++++|+++| +++|+ ++++|.+|+++.
T Consensus 254 vD--~~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~Gai---Dpl~eI~~l~~~~~~~gl~~~lHVDAAyGG~~~~ 328 (608)
T TIGR03811 254 VD--SNYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAV---DGIDKIVALRNKLMKEGIYFYLHVDAAYGGYGRA 328 (608)
T ss_pred cC--CCCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCccc---CCHHHHHHHHHHHHHcCCceeEeeeccccchhhh
Confidence 75 4567999999887743 2 2 345556668899999 5566666665 77887 699999999743
Q ss_pred -cCC-C-CCC----------------------------CccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccc
Q 014603 230 -FGN-T-PFV----------------------------PMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQD 278 (422)
Q Consensus 230 -~~~-~-~~~----------------------------~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~ 278 (422)
+.. . .+. .+..+... .-+.-.++|. +.....+|.++.+++
T Consensus 329 l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~A--DSItvDpHK~-g~~Py~~G~ll~Rd~------ 399 (608)
T TIGR03811 329 IFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAISEA--ESVTIDPHKM-GYIPYSAGGIVIQDI------ 399 (608)
T ss_pred hhccccccccccchhhcccccccccccccccccHhHHHHHhcCcCc--eEEEeCcccc-cccCCCeEEEEEeCH------
Confidence 111 0 000 01112211 1344589999 566677999998863
Q ss_pred hhHHHHHHh---hhh------------hccCcchHHHHHHH--HHHhhc--hHHHHHHHHHHHHHHHHHHHHHhhcC
Q 014603 279 SGIVDSIKS---FLN------------ISSDPATFIQGAVP--QILEKT--EEEFFSKITDILRETADICCDRLKEI 336 (422)
Q Consensus 279 ~~~~~~~~~---~~~------------~~~~~~~~~~~a~~--~~l~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~ 336 (422)
++.+.+.. +.. .....+.....++. ..++.. ....+.++..+.-+.++++.+.|+++
T Consensus 400 -~~~~~~~~~a~Yl~~~~~~~p~~~g~~~legSR~ga~AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~ 475 (608)
T TIGR03811 400 -RMRDVISYFATYVFEKGADIPALLGAYILEGSKAGATAASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNNL 475 (608)
T ss_pred -HHHHHHhcCcchhccccccCcccccccceecCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 23332211 100 00111222222222 223322 35678888888889999999999874
No 375
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.39 E-value=1.1e-09 Score=111.11 Aligned_cols=298 Identities=14% Similarity=0.147 Sum_probs=182.5
Q ss_pred CCcHHHHHHHHHHhhCCCCCCCCCCC-----C----CHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhc-
Q 014603 62 RTASVAVDAIVHSVRSARFNCYSSTV-----G----ILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLA- 131 (422)
Q Consensus 62 ~~~~~v~~a~~~~~~~~~~~~y~~~~-----g----~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~- 131 (422)
-.|+.+.+.+.+- ...+..|.|.+ | +-+++..++++. +.+..+.-+..++|++.++++.+..
T Consensus 77 ~~p~~i~r~v~~~--p~~~TaytPyQ~EisQG~Le~l~e~Qt~i~eLt------Gm~~aNaSl~d~atA~aEa~~~a~~~ 148 (939)
T TIGR00461 77 ILPPVIQRNLLEN--PGWYTAYTPYQPEISQGRLEALLNFQTVVSDLT------GLPVANASLLDEGTAAAEAMALSFNV 148 (939)
T ss_pred cCChHHHHHHHhC--chhhhcCCCCChhhhhHHHHHHHHHHHHHHHHH------CCChhhhhccchhhHHHHHHHHHHHh
Confidence 3456666455431 12244565543 2 335566677776 5677788888999998887776642
Q ss_pred --CCCCEEEecCCCccchHH----HHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHH
Q 014603 132 --RPGANILLPRPGFPYYEA----RATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHL 205 (422)
Q Consensus 132 --~~gd~Vl~~~~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l 205 (422)
+++++|++++..|+.+.. .+...|++++.+ |++.|++.+ ++.++++.+|+. .|.+ +++
T Consensus 149 ~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~----------~~~~l~~~~--~~~~v~~q~Pn~-~G~i---ed~ 212 (939)
T TIGR00461 149 SKKKANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVV----------DCSDIKKAV--DVFGCLLQYPAT-DGSI---LDY 212 (939)
T ss_pred hcCCCCEEEECCCCCcchHHHHHHHHHhcCcEEEEE----------cHHHHhhcC--CEEEEEEECCCC-CeEE---ecH
Confidence 234899999999987653 344678777765 334565554 466677778876 8888 689
Q ss_pred HHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCC----CCceeEEEEeeCCCCcccchhH
Q 014603 206 QKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIV----PGWRLGWLVTSDPNGILQDSGI 281 (422)
Q Consensus 206 ~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~----~G~r~G~~~~~~~~~~~~~~~~ 281 (422)
++|.++++++|.+++++.-...+. ...+..+++.| |++++- |.||. .|.-.|++.+++ ++
T Consensus 213 ~~i~~~~h~~gal~~~~ad~~al~----ll~~Pge~GaD---i~vg~~-q~fg~p~g~GGP~aG~~a~~~--------~l 276 (939)
T TIGR00461 213 KQLIDALHSHKSLVSVAADLMALT----LLTPPGHYGAD---IVLGSS-QRFGVPMGYGGPHAAFFAVKD--------EY 276 (939)
T ss_pred HHHHHHHHHcCCEEEEEechHHhC----CcCCHHHcCCc---EEeeCC-CccCCCCCCCCCceeeeeecH--------hh
Confidence 999999999999999854433221 12233455554 556543 33344 244477777653 22
Q ss_pred HHHHH----------------------------hhhhhccCcchHHHHH--HHHHHhhchHHHHHHHHHHHHHHHHHHHH
Q 014603 282 VDSIK----------------------------SFLNISSDPATFIQGA--VPQILEKTEEEFFSKITDILRETADICCD 331 (422)
Q Consensus 282 ~~~~~----------------------------~~~~~~~~~~~~~~~a--~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 331 (422)
.+.+. +.+.+++-++.....+ +..++.....++++++.++...+..++.+
T Consensus 277 ~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrRekAtSNICt~qaL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~ 356 (939)
T TIGR00461 277 NRKMPGRIVGVSKDALGNTALRLALQTREQHIRRDKATSNICTAQVLLANVASSYCVYHGPKGLKNIARRIHSLTSILAN 356 (939)
T ss_pred HhhCCCCceeEEecCCCCccceeecccccccccccccCcchhHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
Confidence 22221 1111111111111122 22223334578899999999999999999
Q ss_pred HhhcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHH
Q 014603 332 RLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLG 409 (422)
Q Consensus 332 ~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~ 409 (422)
.|++. |+++. .+ .+|--+.+... . .+..++...+ .++||.+.... .+.+++|+. +++++|+.+++
T Consensus 357 ~L~~~-G~~~~-~~--~fF~~~~v~~~---~-~~~~~i~~~~-~~~gi~l~~~~----~~~i~~s~~E~~t~~di~~l~~ 423 (939)
T TIGR00461 357 GLEND-PHELI-NK--TWFDTLTVKVG---N-GISSELLKAA-EEFNINLRAVD----TTTVGIALDETTTKADVENLLK 423 (939)
T ss_pred HHHhC-CCccc-CC--CccceEEEEeC---C-CCHHHHHHHH-HHCCCeeeecC----CCEEEEEeecCCCHHHHHHHHH
Confidence 99995 88744 33 22322222211 0 1456676666 55699976522 468999998 78999999999
Q ss_pred HHH
Q 014603 410 RMK 412 (422)
Q Consensus 410 ~l~ 412 (422)
.+.
T Consensus 424 ~~~ 426 (939)
T TIGR00461 424 VFD 426 (939)
T ss_pred Hhc
Confidence 884
No 376
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.34 E-value=1.2e-09 Score=98.80 Aligned_cols=307 Identities=17% Similarity=0.143 Sum_probs=190.2
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecC-HHHHHHH---HHHHh-cCCC----CEEEecCCCccchHHHHhhCCC
Q 014603 86 TVGILPARRAIADYLNRDLPYKLSPDDVYLTLG-CTQAIEV---ILTVL-ARPG----ANILLPRPGFPYYEARATHSHL 156 (422)
Q Consensus 86 ~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g-~~~a~~~---~~~~l-~~~g----d~Vl~~~~~~~~~~~~~~~~g~ 156 (422)
.+|..++-..+.+||.+-. .-+.|.+.+. |.++=.+ +++.. -..| +.+|+++..|..-...+...|.
T Consensus 104 vqG~l~li~~Lq~~L~~IT----G~DavsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNPASAam~G~ 179 (496)
T COG1003 104 VQGYLELIYELQEWLKEIT----GMDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNPASAAMAGF 179 (496)
T ss_pred HHHHHHHHHHHHHHHHHhc----CCceeeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCChhhHhhcCc
Confidence 3567777778888887643 3456666543 2222222 22322 1222 6899999999888889999999
Q ss_pred eEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCC
Q 014603 157 EVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFV 236 (422)
Q Consensus 157 ~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~ 236 (422)
+++.++.+.+ +.+|+++|++...+++.++.+++|+. -|+- .+.|.+|+++.+++|..|..|.+--....+- .
T Consensus 180 ~VV~V~~~~~--G~VDlddLk~k~~~~~AalMiTnPsT-~GvF--E~~I~ei~~ivH~~Gg~vY~DGANlNA~vG~---~ 251 (496)
T COG1003 180 KVVVVKCDEN--GNVDLDDLRAKAEDNLAALMITNPST-LGVF--EEDIREICEIVHEAGGQVYYDGANLNAIVGL---A 251 (496)
T ss_pred eEEEEecCCC--CCccHHHHHHHhccceeEEEeccCcc-cccc--hhhHHHHHHHHHHcCCEEEecCcchhhhhcc---c
Confidence 9999998644 46999999999999999999999986 4554 2679999999999999999999965432221 1
Q ss_pred CccccCCCCCeEEEecCccccCCC----CceeEEEEeeCCCCcccchhHHHHHHh----------------h--h--hhc
Q 014603 237 PMGVFGSIVPVLTLGSISKRWIVP----GWRLGWLVTSDPNGILQDSGIVDSIKS----------------F--L--NIS 292 (422)
Q Consensus 237 ~~~~~~~~~~~i~i~s~sK~~~~~----G~r~G~~~~~~~~~~~~~~~~~~~~~~----------------~--~--~~~ 292 (422)
.-..++.| ++=.-++|+|+.| |..+|=|.+.. .+...+.. . . ...
T Consensus 252 rPGd~G~D---V~HlNLHKTF~iPHGGGGPG~GPvgVk~--------~L~pfLP~p~~~~~~~~y~~~~~~~~s~g~~~a 320 (496)
T COG1003 252 RPGDMGFD---VVHLNLHKTFCIPHGGGGPGAGPVGVKA--------HLAPFLPGPVVYHDVGEYRLDYDGKKSIGVSAA 320 (496)
T ss_pred cccccccc---eEEeecccccccCCCCCCCCCCceehHh--------hccccCCCCcccCCCccccccCCCCccceeecc
Confidence 22334443 3334577888543 44455554421 11111100 0 0 000
Q ss_pred cCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCC-ceE-EEEecCcccccCCCCHHHHH
Q 014603 293 SDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEG-SMF-VMVKLNYSLLEGINSDMEFA 370 (422)
Q Consensus 293 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~-g~~-~~~~~~~~~~~~~~~~~~~~ 370 (422)
.-.|......+..++.....+++++.-+..--+.+++.++|+.. +.+...+.. ..+ +.+.......+......+++
T Consensus 321 ~~Gs~~il~~a~~YI~~mG~~GL~~ase~AvLNANYia~rL~~~--y~~~y~~~~~~~HE~ild~r~l~~~~Gv~~~DvA 398 (496)
T COG1003 321 PYGSASILPIAWAYIRMMGADGLKQASEVAVLNANYIARRLKGY--YPVPYTGENRVAHECILDARPLKKETGVRALDVA 398 (496)
T ss_pred ccCcchHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhhc--CccccCCCCcceeEEEeechHhHhhcCCcHHHHH
Confidence 11122233333344444456778888888888899999999973 332223332 111 12222211111223677888
Q ss_pred HHHHHhcCeEEecCCCCC--CCCeEEEEec--cChHHHHHHHHHHHHHHHHhc
Q 014603 371 LKLAKEESVIVLPGITVG--LKDWLRITFA--VEPSALEDGLGRMKAFYDRHA 419 (422)
Q Consensus 371 ~~l~~~~gi~v~~g~~~~--~~~~iRis~~--~~~~~l~~~~~~l~~~~~~~~ 419 (422)
.+|+ .+|+.-.. -.|- ..+.+-|=++ -+.++||++++++.++.++-.
T Consensus 399 KrLl-D~GfHaPT-~~FPliV~~tLMIEPTEsEsk~eLDrf~dami~I~~Ea~ 449 (496)
T COG1003 399 KRLL-DYGFHAPT-MYFPLIVAGTLMIEPTESESKEELDRFIDAMIAIREEAD 449 (496)
T ss_pred HHHH-hcCCCCCc-ccCccccccceeecCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 8875 57987643 3444 4778888877 467899999999998876643
No 377
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=99.33 E-value=1.2e-09 Score=101.66 Aligned_cols=274 Identities=20% Similarity=0.248 Sum_probs=148.7
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHh---cCCCCEEEecCCCccchHH----HHhhCCCeEEEee
Q 014603 90 LPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVL---ARPGANILLPRPGFPYYEA----RATHSHLEVRHFD 162 (422)
Q Consensus 90 ~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l---~~~gd~Vl~~~~~~~~~~~----~~~~~g~~~~~~~ 162 (422)
-+++..++++. +.+..+.-+-.+++++-++++.+. .+..++|+++...|+.+.. .+...|++++.++
T Consensus 113 fe~Qs~i~eLT------GmdvaNaSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~~ 186 (429)
T PF02347_consen 113 FEYQSMICELT------GMDVANASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVLRTYAAPLGIEIVEVP 186 (429)
T ss_dssp HHHHHHHHHHH------TSSEE-SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHHHHHCCHCCEEEEEE-
T ss_pred HHHHHHHHHhh------CCCccCCCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHHHHhhhhCCeEEEEec
Confidence 36667777776 445445677788888877766553 2334699999999988766 4445688888887
Q ss_pred ccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccC
Q 014603 163 LLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG 242 (422)
Q Consensus 163 ~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~ 242 (422)
.+... ..| ++++.++++.+|+. .|.+ +++++|.++++++|.++++ .+- .....+ ..+...++
T Consensus 187 ~~~~~--~~d--------~~~~a~v~vq~Pn~-~G~~---ed~~~i~~~~h~~gal~~~-~ad-~~aL~~--l~~Pge~G 248 (429)
T PF02347_consen 187 LDEDG--TTD--------DDDTAAVMVQNPNT-FGVF---EDIKEIADIAHAAGALVIV-GAD-PNALGG--LKSPGEYG 248 (429)
T ss_dssp BBTTC--SB---------STTEEEEEEESS-T-TSB-----THHHHHHHHHHTT-EEEE-CGG-CCGCCT--C--GGGGT
T ss_pred ccccC--Ccc--------ccCeEEEEeecCCC-CceE---eeHHHHHHHHHHcCCEEEE-ecC-HHHHhC--cCChhhcC
Confidence 65432 223 56788999999987 8888 7799999999999999887 332 222222 22334555
Q ss_pred CCCCeEEEecCccccCCC----CceeEEEEeeCCCCcccchhHHHHHH----------------------------hhhh
Q 014603 243 SIVPVLTLGSISKRWIVP----GWRLGWLVTSDPNGILQDSGIVDSIK----------------------------SFLN 290 (422)
Q Consensus 243 ~~~~~i~i~s~sK~~~~~----G~r~G~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~ 290 (422)
.| |++++ +|.||.| |..+|++.+++. +.+++. +.+-
T Consensus 249 AD---I~vg~-~Q~fg~p~~~GGP~~G~~a~~~~--------l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKA 316 (429)
T PF02347_consen 249 AD---IVVGE-HQTFGIPMGFGGPGAGFFAVRED--------LVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKA 316 (429)
T ss_dssp -S---EEEEC-CTTTT---CCC-S--EEEEE-GG--------GGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCS
T ss_pred cc---EEeeC-CCCCcccCCCCCCCeeeEEEhhh--------hhhhCCCceecccccccccceeeeccccccccccccch
Confidence 55 66765 7777643 566888887632 222221 1111
Q ss_pred hcc--CcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccccCCCCHHH
Q 014603 291 ISS--DPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDME 368 (422)
Q Consensus 291 ~~~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 368 (422)
+++ +...+...++..++.....+++.+..++...+..++.+.|+++.+.. + ....+|-++.... .. .
T Consensus 317 tSNIctnqaL~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~~~~~-~--~~~~f~e~v~~~~-------~~-~ 385 (429)
T PF02347_consen 317 TSNICTNQALLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKIYGLP-F--DNPFFFEFVVVFS-------KD-K 385 (429)
T ss_dssp TT---SS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTBEC-S--SSSSBSSEEEEES-------S--H
T ss_pred hhhhhhhHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhcCcc-c--CCCCceeeeeecC-------Cc-H
Confidence 111 11222223334445545688999999999999999999999973443 2 2222332222211 11 1
Q ss_pred HHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHHH
Q 014603 369 FALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGRM 411 (422)
Q Consensus 369 ~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~l 411 (422)
....++++ ++.-.-+..+...+.+-+|++ +++++|+++++.+
T Consensus 386 ~~~~l~~~-~~~~gl~~~~~~~~~~li~~TE~~t~edid~lv~~f 429 (429)
T PF02347_consen 386 EVEELLKR-GIEGGLNLRYPDDGALLICVTETRTKEDIDRLVEAF 429 (429)
T ss_dssp HHHHHHHT-T----EEEGGG-SSEEEEE--TT--HHHHHHHHH--
T ss_pred HHHHHHHH-HHhcCCCccccCCCeEEEEccCCCCHHHHHHHHhcC
Confidence 22223322 332211111222458888887 6789999998764
No 378
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=99.32 E-value=2.8e-11 Score=97.45 Aligned_cols=99 Identities=24% Similarity=0.431 Sum_probs=77.9
Q ss_pred cCCCCceeecCCCCCC-------------CCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCC--C
Q 014603 42 NDTRPLIPLGHGDPSA-------------FPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLP--Y 106 (422)
Q Consensus 42 ~~~~~~i~l~~g~~~~-------------~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~--~ 106 (422)
.++.++|+|+...-.+ .+.+..++.+.+++.+. ..|.+..|.+++|+++++|+.+.+| +
T Consensus 40 ~np~G~I~lg~aEN~l~~dli~~~i~~~p~~d~~~~~~i~~~~~~~------a~Y~~~~G~~~lR~AiA~~l~~~~g~~v 113 (153)
T PLN02994 40 HNPQGIIQMGLAENQLCSDLIEEWIEENPHADICTAEGTIDSFKDI------ALFQDYHGLANFRKAIANFMAEARGGRV 113 (153)
T ss_pred cCCCceEeeehhhhHhHHHHHHHHHhCCCccccCCcHHHHHHHHHH------hcCCCCCCcHHHHHHHHHHHHHHhCCCC
Confidence 5677789988765210 02233444445555442 2488889999999999999999877 6
Q ss_pred CCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccc
Q 014603 107 KLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPY 146 (422)
Q Consensus 107 ~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~ 146 (422)
.+++++|++|+|++++++.++.+++++||.|++++|+|++
T Consensus 114 ~~~pd~Ivvt~Ga~~al~~l~~~l~dpGD~VlVp~P~Y~~ 153 (153)
T PLN02994 114 KFDADMIVLSAGATAANEIIMFCIADPGDAFLVPTPYYAA 153 (153)
T ss_pred ccchhheEEcCCHHHHHHHHHHHHcCCCCEEEEeCCCCCC
Confidence 6889999999999999999999999999999999999974
No 379
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=99.16 E-value=1e-08 Score=93.33 Aligned_cols=223 Identities=17% Similarity=0.111 Sum_probs=149.3
Q ss_pred CCcHHHHHHHHHHhhCCCCCCCCCCCCCHHH-HHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEec
Q 014603 62 RTASVAVDAIVHSVRSARFNCYSSTVGILPA-RRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLP 140 (422)
Q Consensus 62 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l-r~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~ 140 (422)
..++++++++...........|.-..+...- ...+++.+.. ....+.++++++.+.|+.+++.++.++ .+|++.
T Consensus 38 ~~~~e~iea~~~~~~~~v~Le~~l~~g~~~~R~~~~~~~~~~----~~~aea~~ivnnn~aAVll~~~al~~~-~EvVis 112 (395)
T COG1921 38 LYSPEAIEAMKEAMRAPVELETDLKTGKRGARLTELAELLCG----LTGAEAAAIVNNNAAAVLLTLNALAEG-KEVVVS 112 (395)
T ss_pred cCCHHHHHHHHHHhcccceeeeecccchhhHHHHHHHHHHhc----ccchhheeeECCcHHHHHHHHhhhccC-CeEEEE
Confidence 3568899999988876433333322221111 1234444422 234678899999999999999998774 444432
Q ss_pred -----CCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCccc--ccCHHHHHHHHHHHH
Q 014603 141 -----RPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGN--VYTYQHLQKIAETAK 213 (422)
Q Consensus 141 -----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~--~~~~~~l~~i~~~~~ 213 (422)
+++++......+..|.+++.+.-.. .....+++.++.+++.+++-++.+|- |. .+ ..++++++|+
T Consensus 113 ~g~lV~gg~~~v~d~~~~aG~~l~EvG~tn----~t~~~d~~~AIne~ta~llkV~s~~~-~f~~~l---~~~~l~~ia~ 184 (395)
T COG1921 113 RGELVEGGAFRVPDIIRLAGAKLVEVGTTN----RTHLKDYELAINENTALLLKVHSSNY-GFTGML---SEEELVEIAH 184 (395)
T ss_pred ccccccCCCCChhHHHHHcCCEEEEecccC----cCCHHHHHHHhccCCeeEEEEeeccc-cccccc---cHHHHHHHHH
Confidence 1577788999999999998886422 25778899999999999887766552 32 22 3567888888
Q ss_pred HcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhh-hc
Q 014603 214 KLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-IS 292 (422)
Q Consensus 214 ~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 292 (422)
++|+++++|.+.+...............+.| ++++|..|.++ |.+.|.+++. ++++++++...- ..
T Consensus 185 ~~~lpvivD~aSg~~v~~e~~l~~~la~GaD---LV~~SgdKllg--GPqaGii~Gk--------KelI~~lq~~~l~Ra 251 (395)
T COG1921 185 EKGLPVIVDLASGALVDKEPDLREALALGAD---LVSFSGDKLLG--GPQAGIIVGK--------KELIEKLQSHPLKRA 251 (395)
T ss_pred HcCCCEEEecCCccccccccchhHHHhcCCC---EEEEecchhcC--CCccceEech--------HHHHHHHHhhhhhhh
Confidence 9999999999987654311122233344554 88899999864 6668988885 688888876552 22
Q ss_pred cCcchHHHHHHHHHHhhc
Q 014603 293 SDPATFIQGAVPQILEKT 310 (422)
Q Consensus 293 ~~~~~~~~~a~~~~l~~~ 310 (422)
........+++.++|+..
T Consensus 252 lrv~K~tla~l~~aLe~y 269 (395)
T COG1921 252 LRVDKETLAALEAALELY 269 (395)
T ss_pred hhcCcHhHHHHHHHHHHH
Confidence 345566667777777653
No 380
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=99.14 E-value=4e-08 Score=87.69 Aligned_cols=327 Identities=13% Similarity=0.066 Sum_probs=187.9
Q ss_pred CCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCC------CC----CCHHHHHHHHHHHhhcCCCCCCCCCEE
Q 014603 45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSS------TV----GILPARRAIADYLNRDLPYKLSPDDVY 114 (422)
Q Consensus 45 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~------~~----g~~~lr~~ia~~l~~~~~~~~~~~~i~ 114 (422)
+...||+.|.. ..|+++.+...+.+.+-...+++- .+ -+.+.++.+.++| +++-+.+-++
T Consensus 4 ~~~~nFsaGPa------~lp~~vL~~a~~e~~~~~g~g~svme~SHRsk~~~~v~~~a~~~lreLl----~iPd~Y~Vlf 73 (365)
T COG1932 4 PRVYNFSAGPA------ALPPEVLQQAQKELLDWNGLGMSVMEISHRSKEFKNVLEEAEKDLRELL----NIPDDYKVLF 73 (365)
T ss_pred CCCCCCCCCcc------cCCHHHHHHHHHHHhhhccCCcceeeeccccHHHHHHHHHHHHHHHHHh----CCCCCceEEE
Confidence 45678999873 345777777666655421111110 11 1234444555555 4444444445
Q ss_pred EecCHHHHHHHHHHHhcCCCCE--EEecCCCccchHHHHhhCCCeEEEeecc-CCCC--cccCHHHHHHhhcCCceEEEE
Q 014603 115 LTLGCTQAIEVILTVLARPGAN--ILLPRPGFPYYEARATHSHLEVRHFDLL-PAKG--WEVDLDAVEALADENTVALVI 189 (422)
Q Consensus 115 ~~~g~~~a~~~~~~~l~~~gd~--Vl~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~--~~~d~~~l~~~~~~~~~~i~i 189 (422)
+-.|+|..+..+...|...... |.+-..+-.+ ...++..+.++...... .+.+ .-++++.+. +.++..-+.+
T Consensus 74 lqGGat~qf~~~p~nLl~~~~~~yv~~g~Ws~~a-~~eA~~~~~~~~~~~~~~~~~~~~~iP~~~~~~--~~~~~ayv~~ 150 (365)
T COG1932 74 LQGGATGQFAMAPMNLLGKRGTDYVDTGAWSEFA-IKEAKKVGKQPKLIDARIEEAGYGSIPDLSKWD--FSDNDAYVHF 150 (365)
T ss_pred EcCccHHHHHHHHHhhhcccCceeEeeeehhHhH-HHHHHHhcccccccccceeccCccCCCChhhcc--cCCCccEEEE
Confidence 5667899999998888755432 4333322222 23444444322211111 1111 223333332 3333323566
Q ss_pred eCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEe
Q 014603 190 INPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVT 269 (422)
Q Consensus 190 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~ 269 (422)
|+-..-+|+-++ +...+.. +.++|.|.+...+.. ..++..++ ++.+|..|.+|..| ++.++.
T Consensus 151 ~~NeTi~Gv~v~--~~p~~~~-----~~~~v~D~SS~ilsr----~iDvsk~d-----viyagaQKnlGpaG--ltvvIv 212 (365)
T COG1932 151 CWNETISGVEVP--ELPDIGS-----DGLLVADASSAILSR----PIDVSKYD-----VIYAGAQKNLGPAG--LTVVIV 212 (365)
T ss_pred ecCCcccceEcc--CCCCCCC-----CceEEEecccHHhcC----CCChhHcc-----eEEEehhhccCccc--eEEEEE
Confidence 665667888765 2222211 278999988766432 23444444 67778999999999 777877
Q ss_pred eCCCCcccchhHHHHHHhh--------------hhhccCcchHHHHHHHHHHhhch-HHHHHHHHHHHHHHHHHHHHHhh
Q 014603 270 SDPNGILQDSGIVDSIKSF--------------LNISSDPATFIQGAVPQILEKTE-EEFFSKITDILRETADICCDRLK 334 (422)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~L~ 334 (422)
+ +++.++.+.. ..+..+|+.+..+.....++... ..+++...++-++..+.|.+.+.
T Consensus 213 r--------~~~l~r~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id 284 (365)
T COG1932 213 R--------PDLLERAESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWID 284 (365)
T ss_pred c--------HHHHhcccccCCchHhhchhhhccCCccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHH
Confidence 5 4566666443 11334777777777766666533 45688888888999999999998
Q ss_pred cCCCCCCCCCC--CCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHH
Q 014603 335 EIPCITCPKKP--EGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGR 410 (422)
Q Consensus 335 ~~~~~~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~ 410 (422)
+-+-......+ .+-+-+.+.+.... -+..++..+ ++.|+...-|+. ..+.+|+++. .+.++++.+++-
T Consensus 285 ~s~fy~~~v~~~~RS~mnV~f~~~~~~-----ld~~fv~ea-e~~gl~~lkGhr--~vgGmRasiynA~~~e~veaL~~f 356 (365)
T COG1932 285 KSDFYRNLVAKANRSRMNVTFTLVDAE-----LDKGFVAEA-EAAGLIYLKGHR--SVGGLRASIYNAVPLEDVEALTDF 356 (365)
T ss_pred hCCccccccchhhccceeEEEEcCcHH-----HHHHHHHHH-HHcCCceecccc--CCCceeeeeecCCCHHHHHHHHHH
Confidence 86322212222 22344445554321 234455554 566877777732 3455999997 688999999999
Q ss_pred HHHHHHHh
Q 014603 411 MKAFYDRH 418 (422)
Q Consensus 411 l~~~~~~~ 418 (422)
++.+.+.+
T Consensus 357 m~~f~~~~ 364 (365)
T COG1932 357 MDWFEETY 364 (365)
T ss_pred HHHHHHhh
Confidence 88887654
No 381
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=99.09 E-value=5.9e-07 Score=81.75 Aligned_cols=305 Identities=18% Similarity=0.220 Sum_probs=177.1
Q ss_pred CCcHHHHHHHHHHhhCCCCCCCCCCC-----C----CHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhc-
Q 014603 62 RTASVAVDAIVHSVRSARFNCYSSTV-----G----ILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLA- 131 (422)
Q Consensus 62 ~~~~~v~~a~~~~~~~~~~~~y~~~~-----g----~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~- 131 (422)
..|+.|.+-+.+ +..++..|.|.+ | +-+++..++++. +.+-.+.-+--++|++-+++..+..
T Consensus 88 ~~P~vI~rnile--~pewyTaYTPYQpEISQGrLqaLfefQtlv~dLT------Gm~VANASm~DeaTAaAEAm~ma~r~ 159 (450)
T COG0403 88 YTPPVILRNILE--NPEWYTAYTPYQPEISQGRLEALFEFQTLVADLT------GLDVANASMLDEATAAAEAMLMAKRV 159 (450)
T ss_pred cCcHHHHHHhhc--CccccccCCCCchhhhhHHHHHHHHHHHHHHHHh------CCCcccchhhhhHHHHHHHHHHHHHh
Confidence 455666534433 123455666642 2 224455666665 4555667777788888777766542
Q ss_pred --CCCCEEEecCCCccchHHHHhh----CCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHH
Q 014603 132 --RPGANILLPRPGFPYYEARATH----SHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHL 205 (422)
Q Consensus 132 --~~gd~Vl~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l 205 (422)
.+.++++++..+|+-+....+. +|.+++..+.+ |.+.+++..+.++.++++-.|+. .|... +++
T Consensus 160 ~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~-------d~~~l~~~~~~~~~gv~vQyP~~-~G~~~--~d~ 229 (450)
T COG0403 160 TKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDAD-------DLDDLESADDGDVFGVLVQYPNT-FGIVE--EDL 229 (450)
T ss_pred hcCcCceEEecCCCCHHHHHHHHhhcccCceEEEEeccc-------hhhhhhhccccCeEEEEEecCCC-CCccc--hhH
Confidence 2358999999999877655543 34555544432 66777777333678888888885 66332 679
Q ss_pred HHHHHHHHHcCcEEEE--cccccccccCCCCCCCccccCCCCCeEEEecCccccCCC----CceeEEEEeeCCCCcccch
Q 014603 206 QKIAETAKKLGIMVIA--DEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVP----GWRLGWLVTSDPNGILQDS 279 (422)
Q Consensus 206 ~~i~~~~~~~~~~li~--D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~----G~r~G~~~~~~~~~~~~~~ 279 (422)
.+|.+.++.+|.++++ |-..-.+ ..+..+++.| |++++..-+ |.| |..+|+..+.+
T Consensus 230 ~~l~~~~h~~~al~~v~aDplaL~L------L~pPGe~GAD---IvvG~~Qrf-GvPmgfGGPhag~fA~~~-------- 291 (450)
T COG0403 230 RALIEAAHSAGALVIVAADPLALGL------LKPPGEFGAD---IVVGSAQRF-GVPMGFGGPHAGYFAVKD-------- 291 (450)
T ss_pred HHHHHHHhhcCCEEEEEechhHhhc------cCCccccCCc---eEEecCccc-CCCcCCCCcceeeeeEhH--------
Confidence 9999999999987763 3222111 1233455555 888877665 443 56688887753
Q ss_pred hHHHHHH----------------------------hhhhhccCcch--HHHHHHHHHHhhchHHHHHHHHHHHHHHHHHH
Q 014603 280 GIVDSIK----------------------------SFLNISSDPAT--FIQGAVPQILEKTEEEFFSKITDILRETADIC 329 (422)
Q Consensus 280 ~~~~~~~----------------------------~~~~~~~~~~~--~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l 329 (422)
++..++. +.+-+++-++. +...++..++..+...++.++..+..+...++
T Consensus 292 ~~~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSNICTnQaLlA~~As~y~~~hGp~GLk~iA~r~~~~a~~l 371 (450)
T COG0403 292 EFKRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSNICTNQALLALAASMYAVYHGPQGLKEIAERIHRLAAYL 371 (450)
T ss_pred hHhhcCCCceeeeeecCCCCchhhhhHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHH
Confidence 2222221 11112211111 22222222233345788999999999999999
Q ss_pred HHHhhcCC-CCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHH
Q 014603 330 CDRLKEIP-CITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALED 406 (422)
Q Consensus 330 ~~~L~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~ 406 (422)
.++|++.. ++++. .. .+|--+.+..+. .....++.+ ....|+-+..-. ..++-+++. +++++|+.
T Consensus 372 a~~L~~~~~g~~~~-~~--~fFdt~~v~~~~----~~~~~l~~~-~~~~G~~L~~~~----~~~~~ia~tEt~t~~~i~~ 439 (450)
T COG0403 372 AAGLKEIGAGVELV-FD--HFFDTFTVRVPE----EVAEALLAA-AIAGGINLRRVD----ADTVLIALTETTTKEDIDA 439 (450)
T ss_pred HHHHhhcCCceEec-cc--cceeeEEEecch----hHHHHHHHH-HHhcCCceeeec----CCceEEEeecccCHHHHHH
Confidence 99999763 35522 22 334333332210 012233333 234466665422 346777776 67899999
Q ss_pred HHHHHHHH
Q 014603 407 GLGRMKAF 414 (422)
Q Consensus 407 ~~~~l~~~ 414 (422)
++..+...
T Consensus 440 l~~~~~~~ 447 (450)
T COG0403 440 LVAAFGGV 447 (450)
T ss_pred HHHHHhhh
Confidence 98887654
No 382
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=99.05 E-value=3.3e-08 Score=87.07 Aligned_cols=205 Identities=14% Similarity=0.123 Sum_probs=114.7
Q ss_pred CceEEEEeCC-CCCccc-ccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCC
Q 014603 183 NTVALVIINP-GNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVP 260 (422)
Q Consensus 183 ~~~~i~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~ 260 (422)
.+.+.+|..| +...|- .-+++..+++..++++||+.+|+||++.+.+-+|.. .....++-+.. .-+-+|||-|. .
T Consensus 270 ~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~-WaHehw~l~~P-pD~vTFSKK~q-~ 346 (484)
T KOG1405|consen 270 KPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKF-WAHEHWNLDSP-PDVVTFSKKFQ-T 346 (484)
T ss_pred CCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCce-eeehhcCCCCC-ccceehhhhhh-c
Confidence 4677788888 555554 578899999999999999999999999987666542 22222222111 22335789864 4
Q ss_pred CceeEEEEeeCCCCcccchhHHHHHHhhhhh-ccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhh----c
Q 014603 261 GWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLK----E 335 (422)
Q Consensus 261 G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~----~ 335 (422)
| ||..-. +++.. +.++.+ +....+.-...+.++++...++.+- +..+..-+.|...|. +
T Consensus 347 g---Gffh~~---------~frpn-~pYrifNTWmGdP~k~lll~~vv~~I~~~~Ll---~n~~~vG~~l~~gL~~Lq~~ 410 (484)
T KOG1405|consen 347 G---GFFHDE---------EFRPN-EPYRIFNTWMGDPSKNLLLEEVVQEIKREDLL---NNVAHVGKALLKGLLELQAK 410 (484)
T ss_pred C---ccccCc---------ccCCC-chHHHhhhhcCChHHHHHHHHHHHHHhHHHHH---HHHHHHHHHHHHHHHHHHHh
Confidence 4 554421 12211 111111 1233333333333444443322222 223333333333333 3
Q ss_pred CCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHHHHH
Q 014603 336 IPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGRMKA 413 (422)
Q Consensus 336 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~l~~ 413 (422)
.|+.- -.....|.|+...++.. ...+.+-..++-+|+.+..+ + ...+|+.++ ..+...+-.++++.+
T Consensus 411 ~p~~~-~~~RGrGTF~a~d~ps~------~~Rdk~i~~~~~nGv~~GGC---g-~~siRfRPsLvf~~~Ha~i~l~~~~k 479 (484)
T KOG1405|consen 411 YPGKI-NNLRGRGTFIAWDCPSG------SIRDKLILIARLNGVNLGGC---G-DKSIRFRPSLVFRKHHADIFLDIFDK 479 (484)
T ss_pred Cchhh-hcccccceEEEEeCCCh------HHHHHHHHHHHHcCceeccc---c-cceeeeccceeehhhhHHHHHHHHHH
Confidence 46543 22334577887788764 33444555567789887543 2 344566555 677788888888888
Q ss_pred HHHH
Q 014603 414 FYDR 417 (422)
Q Consensus 414 ~~~~ 417 (422)
.+..
T Consensus 480 ~l~~ 483 (484)
T KOG1405|consen 480 ILAG 483 (484)
T ss_pred Hhcc
Confidence 7754
No 383
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=99.04 E-value=1.2e-06 Score=80.20 Aligned_cols=321 Identities=12% Similarity=0.061 Sum_probs=179.4
Q ss_pred CCCCCHHHHHHHHHHHhhcCCCCC--------CCCCEEEecCHHHHHHHHHHHh-------cCCC-----------C-EE
Q 014603 85 STVGILPARRAIADYLNRDLPYKL--------SPDDVYLTLGCTQAIEVILTVL-------ARPG-----------A-NI 137 (422)
Q Consensus 85 ~~~g~~~lr~~ia~~l~~~~~~~~--------~~~~i~~~~g~~~a~~~~~~~l-------~~~g-----------d-~V 137 (422)
..+.+.||+..+.+||....+.+. +...+ +..+++++...++-+. .+.+ + .+
T Consensus 107 ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGv-iQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~ 185 (511)
T KOG0628|consen 107 SSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGV-IQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLARLVA 185 (511)
T ss_pred cCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcce-EecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhheE
Confidence 345578999999999987544321 22234 4444555554443321 1111 1 34
Q ss_pred EecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCC----ceEEEEeCCCCCcccccCHHHHHHHHHHHH
Q 014603 138 LLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADEN----TVALVIINPGNPCGNVYTYQHLQKIAETAK 213 (422)
Q Consensus 138 l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~----~~~i~i~~p~nptG~~~~~~~l~~i~~~~~ 213 (422)
...+..|.+....+...+++.+.++.+. +++++.+.|++++.++ -.-++++.--.-||. ...+++.+|..+|+
T Consensus 186 Y~SDqahssveka~~i~~VklR~l~td~--n~~mr~~~L~~AIe~D~arGlIPf~v~at~GTT~~-ca~D~l~elg~Vc~ 262 (511)
T KOG0628|consen 186 YCSDQAHSSVEKACLIAGVKLRALPTDE--NFGMRGDTLRKAIEEDIARGLIPFFVCATLGTTSS-CAFDELEELGPVCR 262 (511)
T ss_pred EecCcccchHHHhHhhcceeEEEeeccc--CcCCCHHHHHHHHHHHHhCCCccEEEEEeecCccc-cccccHHHhcchhh
Confidence 5678889999998888899999888653 7889999999887542 222333322222333 23478999999999
Q ss_pred HcCcEEEEcccccccccCCCCCCC-ccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhH-HHHHHhhhhh
Q 014603 214 KLGIMVIADEVYDHLAFGNTPFVP-MGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGI-VDSIKSFLNI 291 (422)
Q Consensus 214 ~~~~~li~D~~~~~~~~~~~~~~~-~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~-~~~~~~~~~~ 291 (422)
++|+++++|.+|++..+--..+.. +..++..+ -+-.-.||+ ++--+-|..+...+...+...-.. -..++.....
T Consensus 263 ~~glWLHVDAAYAGsa~iCpE~r~l~rGie~aD--Sfn~n~hK~-~~vnfDCs~lWvkd~~~~~~~~~vdp~yL~h~~~~ 339 (511)
T KOG0628|consen 263 EEGLWLHVDAAYAGSAFICPEFRYLMRGIEYAD--SFNFNPHKW-LLVNFDCSPLWVKDGTKLSRAFNVDPLYLKHAYQG 339 (511)
T ss_pred hcCEEEEeehhhccccccCHHHHHHhhcchhhc--cccCChhhe-eEEeeeeecceeecCceeeeeeecChHhhcchhhc
Confidence 999999999999964442111111 11111111 222345566 344444444444433111000000 0011111110
Q ss_pred cc-----CcchHH--HHHHHHH--HhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccccC
Q 014603 292 SS-----DPATFI--QGAVPQI--LEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEG 362 (422)
Q Consensus 292 ~~-----~~~~~~--~~a~~~~--l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 362 (422)
.. ..-+++ ..++..+ ++...-+.+++..++.-++.+.+.+.+.+-+.+++.....-|... +++...
T Consensus 340 ~~~Dyrhwqipl~rRfRSLKlWfv~R~~Gve~lq~~iR~h~~La~~fe~lv~~d~~FE~~~~~~lgLvc-FRlk~~---- 414 (511)
T KOG0628|consen 340 SAPDYRHWQIPLGRRFRSLKLWFVLRSYGVENLQNYIREHVRLAKEFETLVRADPRFEIVNKRILGLVC-FRLKGD---- 414 (511)
T ss_pred cCCCccccccccccchhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCcceeecccccceeE-EeecCC----
Confidence 00 000111 1222222 222223455556666667777777777776777755444445333 455432
Q ss_pred CCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec---cChHHHHHHHHHHHHHHHHh
Q 014603 363 INSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA---VEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 363 ~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~---~~~~~l~~~~~~l~~~~~~~ 418 (422)
......+..++-....|.+.|... ...=.+|++++ ++.++++++-+.|.+..+++
T Consensus 415 N~~ne~Ll~~in~~g~i~l~~~~l-~gk~vlRf~V~s~~t~~~di~~a~~~I~~~a~~l 472 (511)
T KOG0628|consen 415 NEINEALLNRLNSSGRIHLVPASL-HGKFVLRFAVCSPLTNESDIDEAWKIIFEAADEL 472 (511)
T ss_pred cHHHHHHHHHHHhcCcEEEEEeee-cceEEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Confidence 124566777777777888888653 22446899887 67899999999999888764
No 384
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.04 E-value=4e-08 Score=87.72 Aligned_cols=155 Identities=20% Similarity=0.260 Sum_probs=99.0
Q ss_pred cCHHHHHHHHHHHhcCCCCEEEecC-CCccchH----------HHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCce
Q 014603 117 LGCTQAIEVILTVLARPGANILLPR-PGFPYYE----------ARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTV 185 (422)
Q Consensus 117 ~g~~~a~~~~~~~l~~~gd~Vl~~~-~~~~~~~----------~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~ 185 (422)
.|||.|+..++.++++|||+++... .-|.... ...+.+|+....+++.++ ..+|.+.+++.++++++
T Consensus 79 vSGTHAi~~~Lfg~LrpGD~ll~~tG~PYDTL~~VIG~~g~~~GSL~e~Gi~Y~~v~L~~d--g~~D~~~i~~~~~~~tk 156 (403)
T PF06838_consen 79 VSGTHAIALALFGVLRPGDELLSITGKPYDTLEEVIGIRGNGPGSLKEFGIKYREVPLTED--GTIDWEAIKKALKPNTK 156 (403)
T ss_dssp -SHHHHHHHHHHHH--TT-EEEESSSS--CCHHHHHTSSSSSSSSTGGGT-EEEE--B-TT--SSB-HHHHHHHHHTTEE
T ss_pred cchHHHHHHHHHhcCCCCCeEEEcCCCchhhHHHHhCCCCCCCCChHHhCceeEEEeecCC--CCcCHHHHHHhhccCce
Confidence 4789999999999999999998643 3333222 223556778888888643 46999999999999999
Q ss_pred EEEEeCC-CCCcccccCHHHHHHHHHHHHHc--CcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCC-
Q 014603 186 ALVIINP-GNPCGNVYTYQHLQKIAETAKKL--GIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPG- 261 (422)
Q Consensus 186 ~i~i~~p-~nptG~~~~~~~l~~i~~~~~~~--~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G- 261 (422)
+++|--. ...+=..++.++|+++++++|+. ++++++|.+|+.|.-.-+ + ...+.| ++.+|+=|..| .|
T Consensus 157 ~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEFvE~~E-P---~~vGAD---l~aGSLIKNpG-Ggi 228 (403)
T PF06838_consen 157 MVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYGEFVETQE-P---TEVGAD---LMAGSLIKNPG-GGI 228 (403)
T ss_dssp EEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTTTTTSSS--G---GGGT-S---EEEEETTSGGG-TTT
T ss_pred EEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcceeccccC-c---cccchh---heeccceeCCC-CCc
Confidence 9887744 33333457789999999999865 789999999998653211 1 233444 99999999953 33
Q ss_pred -ceeEEEEeeCCCCcccchhHHHHHHhhh
Q 014603 262 -WRLGWLVTSDPNGILQDSGIVDSIKSFL 289 (422)
Q Consensus 262 -~r~G~~~~~~~~~~~~~~~~~~~~~~~~ 289 (422)
.--||++++ .++.++.....
T Consensus 229 AptGGYIaGr--------~~lVe~~a~RL 249 (403)
T PF06838_consen 229 APTGGYIAGR--------KDLVERAAYRL 249 (403)
T ss_dssp -SS-EEEEES--------HHHHHHHHHHH
T ss_pred cCcCCEEech--------HHHHHHHHhhh
Confidence 234888875 57888776554
No 385
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=98.94 E-value=4.7e-07 Score=82.59 Aligned_cols=288 Identities=14% Similarity=0.127 Sum_probs=150.7
Q ss_pred CCEEEecCHHHH-HHHHHHHhc--CCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCC-cccCHHHHHHhhc---CC
Q 014603 111 DDVYLTLGCTQA-IEVILTVLA--RPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKG-WEVDLDAVEALAD---EN 183 (422)
Q Consensus 111 ~~i~~~~g~~~a-~~~~~~~l~--~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~d~~~l~~~~~---~~ 183 (422)
+..++++-+|.- +.+.+.++. ..++.|+.+.-.+.....++...|.+++.++....++ ...|.+.+++.++ +.
T Consensus 75 ~~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~kai~~AGl~~~vV~~~~~~d~l~td~~~ie~~i~~~G~~ 154 (389)
T PF05889_consen 75 KSCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCFKAIERAGLEPVVVENVLEGDELITDLEAIEAKIEELGAD 154 (389)
T ss_dssp CEEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHHHHHHHHTT-EEEEE-EEEETTEEEEHHHHHHHHHHHHCGG
T ss_pred cceEEEecccccHHHHHHHHHhcccCCceEEEeeccccchHHHHHhcCCeEEEeeccCCCCeeeccHHHHHHHHHHhCCC
Confidence 456777666543 333344443 4568999999888888888889999998888543333 3446677776653 35
Q ss_pred ceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCC-CCCCCccccCCCCCeEEEecCccccCCCCc
Q 014603 184 TVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGN-TPFVPMGVFGSIVPVLTLGSISKRWIVPGW 262 (422)
Q Consensus 184 ~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~-~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~ 262 (422)
..+.++++++.-.+... +++++|+++|++||+..|+..||+.-...- +........+.- -+++.|+-|-|..|-
T Consensus 155 ~iLcvltttscfapr~~--D~i~~IakiC~~~~IPhlvNnAYgvQ~~~~~~~i~~a~~~GRv--da~vqS~dkNF~VPv- 229 (389)
T PF05889_consen 155 NILCVLTTTSCFAPRLP--DDIEEIAKICKEYDIPHLVNNAYGVQSSKCMHLIQQAWRVGRV--DAFVQSTDKNFMVPV- 229 (389)
T ss_dssp GEEEEEEESSTTTTB------HHHHHHHHHHHT--EEEEGTTTTT-HHHHHHHHHHHHHSTC--SEEEEEHHHHHCEES-
T ss_pred CeEEEEEecCccCCCCC--ccHHHHHHHHHHcCCceEEccchhhhHHHHHHHHHHHHhcCCc--ceeeeecCCCEEecC-
Confidence 67788888765555553 569999999999999999999997510000 000000001111 177889999986541
Q ss_pred eeEEEEeeCCCCcccchhHHHHHHhhh-hhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhc----CC
Q 014603 263 RLGWLVTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKE----IP 337 (422)
Q Consensus 263 r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~ 337 (422)
.-+.+..++ +..+..+.... ...+..+. .......+.. ....+.......++...+++++|++ .
T Consensus 230 Ggai~As~~-------~~~i~~vs~~YpGRas~sp~--ld~~itLl~L-G~~g~~~ll~~r~~~f~~l~erl~~~aee~- 298 (389)
T PF05889_consen 230 GGAIMASFD-------PSGILAVSKEYPGRASASPS--LDLFITLLSL-GCTGYGALLKERKASFPYLKERLKKWAEEV- 298 (389)
T ss_dssp SHEEEEESS-------HHHHHHHHHTSHSHBTSHHH--HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-
T ss_pred CCcEEEecC-------HHHHHHHHHHhhhhhhcccc--hHHHHHHHHH-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHh-
Confidence 123444433 56666665543 22222222 2222222222 2223333444444444444444442 2
Q ss_pred CCCCCCCCCCceEEEEecCcccccCCC-CHHHHHHHHHHhcCeE----EecCCCCC-------CCCeEEEEe--ccChHH
Q 014603 338 CITCPKKPEGSMFVMVKLNYSLLEGIN-SDMEFALKLAKEESVI----VLPGITVG-------LKDWLRITF--AVEPSA 403 (422)
Q Consensus 338 ~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~gi~----v~~g~~~~-------~~~~iRis~--~~~~~~ 403 (422)
+-.+...|.+...+.+.++... ... ...-++-..|..+||. |.|+.... ...++-++. +.+++|
T Consensus 299 ~e~ll~~p~N~is~a~tl~~l~--~~~~k~~~~lgs~Lf~R~VsG~RvV~~~~~~~tsh~~~yp~~Ylt~AsaiG~~~ee 376 (389)
T PF05889_consen 299 GERLLETPRNHISMAFTLDTLY--EISQKDGTFLGSMLFKRGVSGIRVVTPGGKKQTSHSSNYPCPYLTAASAIGMTREE 376 (389)
T ss_dssp TEEBSSSTT-SSEEEEE-TTCC--TCCSSHHHHHHHHHHHTTEESSEEEETSSCEEETTSS--SSSEEEEEE-TT--HHH
T ss_pred hhhhcCCCCCCeeEEEECccch--hhccchhhhHHHHHHhCCcccceeeccCCCcccccCCCCchHHHHHHHHhCCCHHH
Confidence 2222335666555556665321 111 1223334444556664 33332211 135677744 489999
Q ss_pred HHHHHHHHHHHHH
Q 014603 404 LEDGLGRMKAFYD 416 (422)
Q Consensus 404 l~~~~~~l~~~~~ 416 (422)
++.++++|+++++
T Consensus 377 vd~~v~rL~k~i~ 389 (389)
T PF05889_consen 377 VDYFVKRLDKIIK 389 (389)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhC
Confidence 9999999999874
No 386
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=98.94 E-value=1.9e-06 Score=76.46 Aligned_cols=340 Identities=16% Similarity=0.124 Sum_probs=204.3
Q ss_pred ceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHH
Q 014603 47 LIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVI 126 (422)
Q Consensus 47 ~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~ 126 (422)
.|||=....+ -.+....+.+|..- .-.|..+.+.-.|++++.+.+ .-+.++.|.-|..|-+++
T Consensus 48 ~IDLLTDSGT----gams~~qwaamm~G-----DEAYagsrs~~~L~~avkdif--------Gfq~~iPthQGRgAE~Il 110 (471)
T COG3033 48 FIDLLTDSGT----GAMTDKQWAAMMRG-----DEAYAGSRSYYALADAVKDIF--------GFQYTIPTHQGRGAENIL 110 (471)
T ss_pred EEEeeccCCc----ccccHHHHHHHhcc-----chhhcccccHHHHHHHHHHhc--------CceeeeeccCCccHHHHH
Confidence 4666444333 13345555555442 126777788889999999998 246788888888888888
Q ss_pred HHHhcC-----CCCEEEecCCCccch-HHHHhhCCCeEEEeeccCCC--------CcccCHHHHHHhhcC----CceEEE
Q 014603 127 LTVLAR-----PGANILLPRPGFPYY-EARATHSHLEVRHFDLLPAK--------GWEVDLDAVEALADE----NTVALV 188 (422)
Q Consensus 127 ~~~l~~-----~gd~Vl~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~--------~~~~d~~~l~~~~~~----~~~~i~ 188 (422)
+..+++ ||.+.+++++.|.-. ....+..|..++.++++... .+.+|++.|++.+++ +...++
T Consensus 111 ~~i~ik~~~~~pg~~~~~~sN~~FdTTr~h~~~ng~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~ 190 (471)
T COG3033 111 IPILIKKGEQEPGSKMVAFSNYHFDTTRGHIQINGATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIV 190 (471)
T ss_pred HHHHhhhccccCCccccccccceecchhHHHHhcCCccccccccccccccccCCCCCccCHHHHHHHHHHhCcccCcEEE
Confidence 877765 455667777777544 44445567666666553211 245799999998864 344444
Q ss_pred EeCC-CCCcccccCHHHHHHHHHHHHHcCcEEEEcccccc----cccC---CCCCCCccccCC----CCCeEEEecCccc
Q 014603 189 IINP-GNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDH----LAFG---NTPFVPMGVFGS----IVPVLTLGSISKR 256 (422)
Q Consensus 189 i~~p-~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~----~~~~---~~~~~~~~~~~~----~~~~i~i~s~sK~ 256 (422)
++-. |...|+..|.+-+++..++|++|++.++.|.+-.. +.-. |-...++..+.. .. .-.+.|.-|-
T Consensus 191 ~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYa-D~~~mS~KKD 269 (471)
T COG3033 191 LTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYSYA-DGCTMSAKKD 269 (471)
T ss_pred EEEeccccCCCcchHHhHHHHHHHHHHcCCcEEeehhhhhhhhhhhhhcCcccccccHHHHHHHHHhhh-hhheeecccc
Confidence 4433 44677888999999999999999999999998532 1100 101111111100 00 0234466666
Q ss_pred cCCCCceeEEEEeeCCCCcccchhHHHHHHhhhh------hccCcchHHHHHHHHHHhhc-hHHHHHHHHHHHHHHHHHH
Q 014603 257 WIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN------ISSDPATFIQGAVPQILEKT-EEEFFSKITDILRETADIC 329 (422)
Q Consensus 257 ~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~~l 329 (422)
++..+ -|+++.+|... -++...++...- ..++.+.-.+.+++.-|.+. ...|+.++.++++.+.
T Consensus 270 -~lvnm-GGfl~~~D~~~----fDvy~~~~~~~V~~eG~~tYGgl~GrdmealAvGL~e~~~~~yl~~Rv~Qv~YL~--- 340 (471)
T COG3033 270 -GLVNM-GGFLCFKDDSF----FDVYEECRTLVVVQEGFPTYGGLAGRDMEALAVGLREGVNFDYLAHRVAQVQYLA--- 340 (471)
T ss_pred -ceecc-ccEEEecCccH----HHHHHHHHhheEeeccccccCcccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHH---
Confidence 44321 27778776421 124444443321 12333444555655556553 2577777777766554
Q ss_pred HHHhhcCCCCCCCCCCCCceEEEEecCc----ccccCCCCHHHHHHHHHHhcCeEEecCCCCCC-------------CCe
Q 014603 330 CDRLKEIPCITCPKKPEGSMFVMVKLNY----SLLEGINSDMEFALKLAKEESVIVLPGITVGL-------------KDW 392 (422)
Q Consensus 330 ~~~L~~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~-------------~~~ 392 (422)
+.|++. |+.++ .|.+|.-.++.... -..+.. .++.+..+|-++.||-..--..+.. -..
T Consensus 341 -~~l~~~-GVpi~-~paGGHavfvda~~~lphip~eqF-paqala~ely~e~GiRavElG~~~~~rd~ktg~q~~~~~el 416 (471)
T COG3033 341 -DGLEEA-GVPIV-QPAGGHAVFVDAGKFLPHIPAEQF-PAQALACELYKEAGIRAVELGSFSLGRDPKTGKQHPPPAEL 416 (471)
T ss_pred -HHHHhc-CCeeE-ecCCCceEEeehhhhcCCCChhhC-cHHHHHHHHHHHhCeeeeeeeceecccCCCccccCCCchhe
Confidence 555555 77633 77778777765422 111112 3566677777888987664333321 256
Q ss_pred EEEEec---cChHHHHHHHHHHHHHHHH
Q 014603 393 LRITFA---VEPSALEDGLGRMKAFYDR 417 (422)
Q Consensus 393 iRis~~---~~~~~l~~~~~~l~~~~~~ 417 (422)
+|+++. .+.+.++..++.+++..++
T Consensus 417 vRltipRrtYt~~HmD~V~~a~~~l~e~ 444 (471)
T COG3033 417 VRLTIPRRTYTQTHMDFVIEAFKALKEN 444 (471)
T ss_pred eeEeccccccchhHHHHHHHHHHHHHhc
Confidence 999997 4678898888888877654
No 387
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=98.92 E-value=3.4e-09 Score=95.57 Aligned_cols=251 Identities=18% Similarity=0.158 Sum_probs=52.1
Q ss_pred CCcHHHHHHHHHHhhCCCCCCCCCCCC-----CHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCE
Q 014603 62 RTASVAVDAIVHSVRSARFNCYSSTVG-----ILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGAN 136 (422)
Q Consensus 62 ~~~~~v~~a~~~~~~~~~~~~y~~~~g-----~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~ 136 (422)
+.++++.+++.+...+.....|.-..| +..+.+.+++.. ..+..+++++..+|+.+++.++. +|.+
T Consensus 17 ~l~~~a~~a~~~~a~~Y~nLE~dl~~G~Rg~R~~~v~~ll~~lt--------gAeaA~VvNnnaAAv~L~l~~la-~~~E 87 (367)
T PF03841_consen 17 PLSEEAIEAVAEVASGYSNLEYDLETGKRGSRYAHVEELLCELT--------GAEAALVVNNNAAAVLLALNTLA-KGKE 87 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccc--------ccccccccccccccccccccccc-cccc
Confidence 445777777777654422223322111 122333333333 45677888888899999888886 4667
Q ss_pred EEecCCCcc------chHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCc--ccccCHHHHHHH
Q 014603 137 ILLPRPGFP------YYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPC--GNVYTYQHLQKI 208 (422)
Q Consensus 137 Vl~~~~~~~------~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~npt--G~~~~~~~l~~i 208 (422)
|++....-. .+....+..|..++.+.... ...+++.+++++++|.+++..+++|-. |-.- .-.++++
T Consensus 88 vIvsRGelVeiGgsFRip~vm~~sGa~lvEVGttN----~t~~~Dye~AI~e~Ta~ll~Vh~Sn~~i~GFt~-~~~~~el 162 (367)
T PF03841_consen 88 VIVSRGELVEIGGSFRIPDVMRQSGARLVEVGTTN----RTHLSDYEKAITENTAALLKVHTSNFRIQGFTG-EVSLEEL 162 (367)
T ss_dssp ------------------------------------------------------------------------------HH
T ss_pred ccccccccccccccccccccccccccccccccccc----ccccccccccccccccccccccccccccccccc-cccHHHH
Confidence 777654331 24556677788888776432 246778889999999999999987742 2111 1258889
Q ss_pred HHHHHHcCcEEEEcccccccc----cCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHH
Q 014603 209 AETAKKLGIMVIADEVYDHLA----FGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDS 284 (422)
Q Consensus 209 ~~~~~~~~~~li~D~~~~~~~----~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~ 284 (422)
++++++||+++++|-..+.+. |+-...+.+...-...-.++++|-.|.+|+|- .|.+++. ++++++
T Consensus 163 ~~la~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~~~GaDlV~fSGdKlLGGPQ--aGiI~Gk--------k~lI~~ 232 (367)
T PF03841_consen 163 AELAKEHGLPVIVDLGSGLLVDLSPYGLPDEPTVQEYLAAGADLVTFSGDKLLGGPQ--AGIIVGK--------KELIEK 232 (367)
T ss_dssp HHHHHHHT--EEEE-TTHHHHHHHTT----------CCCCT-SEEEEETTSSSSS-S---EEEEEE--------HHHHHH
T ss_pred HHHHhhcCCcEEEECCCCCCcCcccccCccccHHHHHhhcCCCEEEEECCCcCCCCC--eEEEEeC--------HHHHHH
Confidence 999999999999998874322 10001112222211112288899999976554 7999986 689999
Q ss_pred HHhhhh-hccCcchHHHHHHHHHHhhchH-----------HHHHHHHHHHHHHHHHHHHHhhcC
Q 014603 285 IKSFLN-ISSDPATFIQGAVPQILEKTEE-----------EFFSKITDILRETADICCDRLKEI 336 (422)
Q Consensus 285 ~~~~~~-~~~~~~~~~~~a~~~~l~~~~~-----------~~~~~~~~~~~~~~~~l~~~L~~~ 336 (422)
++...- ..........+++.+.|+...+ ..+....+.++++.+.+...|+..
T Consensus 233 lk~~pl~RalrvdK~tla~L~atL~~Y~~~~~~~~~ip~l~ml~~~~~~L~~rA~~l~~~l~~~ 296 (367)
T PF03841_consen 233 LKKHPLGRALRVDKLTLAALEATLRLYLDPDKAKEEIPTLRMLTQSLEELRARAERLAAQLKAA 296 (367)
T ss_dssp HHHHHHTTT-B--HHHHHHHHHHHHH--------------------------------------
T ss_pred HhhCCCcceEeeCHHHHHHHHHHHHHHHHhhccccccccccccccccccccccccccccccccc
Confidence 876542 2335566667777666664321 123333455666666676666654
No 388
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=98.84 E-value=4.7e-07 Score=81.99 Aligned_cols=261 Identities=14% Similarity=0.090 Sum_probs=148.4
Q ss_pred EecCCCccchHHHHhhCCCe---EEEeeccCCCCcccCHHHHHHhhcC---C--ceEEEEe-CCCCCcccccCHHHHHHH
Q 014603 138 LLPRPGFPYYEARATHSHLE---VRHFDLLPAKGWEVDLDAVEALADE---N--TVALVII-NPGNPCGNVYTYQHLQKI 208 (422)
Q Consensus 138 l~~~~~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~d~~~l~~~~~~---~--~~~i~i~-~p~nptG~~~~~~~l~~i 208 (422)
.+.+-+|+++..++...|+. ++.++. ...+.+++++||+.+-. + +..++-+ .....-|.. +++..|
T Consensus 201 FtSeesHYSi~kaAa~lg~gtd~c~~v~t--~e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAF---DdL~~i 275 (510)
T KOG0629|consen 201 FTSEESHYSIKKAAAFLGLGTDHCIKVKT--DERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAF---DDLNGI 275 (510)
T ss_pred EecccchhhHHHHHHHhccCCceeEEecc--cccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeecc---CcHHHH
Confidence 34577889999999998854 444443 34567999999986632 1 1223222 225566776 889999
Q ss_pred HHHHHHcCcEEEEcccccccc-cCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHh
Q 014603 209 AETAKKLGIMVIADEVYDHLA-FGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKS 287 (422)
Q Consensus 209 ~~~~~~~~~~li~D~~~~~~~-~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~ 287 (422)
+++|++|++++++|.+.++.. .+......+..+...+ -+..+.+|. .+..+.++..+.+.. .+..+...
T Consensus 276 adiC~k~~lWmHvDAAwGGglLmS~k~R~kl~Giera~--SvtwnpHK~-~gaplqCsa~l~r~~-------gll~~Cn~ 345 (510)
T KOG0629|consen 276 ADICEKHKLWMHVDAAWGGGLLMSRKHRHKLTGIERAN--SVTWNPHKL-MGAPLQCSAFLTREE-------GLLQRCNQ 345 (510)
T ss_pred HHHHHhcCEEEEeecccccccccChhhHhhccCccccC--ceeecHHHh-hcCcchhhHHHHHHH-------HHHHhhcc
Confidence 999999999999999987622 2211111222222222 445688999 466688888776532 23333321
Q ss_pred hhh---------h--c-cCcchHHHHH-----HHHHH--hhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC--CC
Q 014603 288 FLN---------I--S-SDPATFIQGA-----VPQIL--EKTEEEFFSKITDILRETADICCDRLKEIPCITCPKK--PE 346 (422)
Q Consensus 288 ~~~---------~--~-~~~~~~~~~a-----~~~~l--~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~--~~ 346 (422)
... + + -+.....|-. ..-+| +.-....+++.++++-++++++.++|++.++...+.. |+
T Consensus 346 ~~A~YLFq~dK~YdvS~DTgdK~iQCGRh~D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~~~pe 425 (510)
T KOG0629|consen 346 MSAIYLFQQDKFYDVSYDTGDKAIQCGRHVDVFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFELEPE 425 (510)
T ss_pred cchhhhhccCceeecccccccchhhcCccccHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhcccceehhcCCCc
Confidence 100 0 0 0111122211 11111 1112456788889999999999999999877543433 44
Q ss_pred CceEEEEecCcccccCCCCH-----------HHHHHHHHHhcCeEEecCCCCCC-CCeEEEEec---cChHHHHHHHHHH
Q 014603 347 GSMFVMVKLNYSLLEGINSD-----------MEFALKLAKEESVIVLPGITVGL-KDWLRITFA---VEPSALEDGLGRM 411 (422)
Q Consensus 347 ~g~~~~~~~~~~~~~~~~~~-----------~~~~~~l~~~~gi~v~~g~~~~~-~~~iRis~~---~~~~~l~~~~~~l 411 (422)
..++.+-..|.. ..++..+ ..+-.++++ +|-....-...+. ++.+|+.++ .+.++++.+++.|
T Consensus 426 ~~nv~fw~vp~~-lR~~~~~~e~~~rL~kVaPkIK~~Mm~-~Gt~Mi~YqPl~~~~nffr~v~sn~a~~~ad~dflldEI 503 (510)
T KOG0629|consen 426 HVNVCFWYVPPS-LRGWQENPERDSRLVKVAPKIKERMMK-KGTTMIGYQPLGDKPNFFRMVISNPALTEADLDFLLDEI 503 (510)
T ss_pred eEEEeeccCchH-hccCcccchhhhHHHhhCcHHHHHHHh-ccceeeEecccccccchhheecccchhhhhhHHHHHHHH
Confidence 233322223221 1111111 112233333 3555444333333 678998887 3678999999998
Q ss_pred HHHH
Q 014603 412 KAFY 415 (422)
Q Consensus 412 ~~~~ 415 (422)
...-
T Consensus 504 erlg 507 (510)
T KOG0629|consen 504 ERLG 507 (510)
T ss_pred HHhc
Confidence 8754
No 389
>PRK12566 glycine dehydrogenase; Provisional
Probab=98.79 E-value=1.1e-05 Score=82.34 Aligned_cols=297 Identities=14% Similarity=0.122 Sum_probs=167.6
Q ss_pred CCcHHHHHHHHHHhhCCCCCCCCCCC-----C----CHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhc-
Q 014603 62 RTASVAVDAIVHSVRSARFNCYSSTV-----G----ILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLA- 131 (422)
Q Consensus 62 ~~~~~v~~a~~~~~~~~~~~~y~~~~-----g----~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~- 131 (422)
..|+.+.+.+.+- ...+..|.|.+ | +-+++..|+++. +.+..+.-+-.++|++-++++.+..
T Consensus 92 ~~P~vi~~~i~~~--~~~yTaYTPYQpEisQG~Lqal~e~Qtmi~~Lt------Gm~vaNASl~D~atA~aEA~~ma~~~ 163 (954)
T PRK12566 92 VTPTVILRNVLEN--PGWYTAYTPYQPEIAQGRLEALLNFQQMTIDLT------GLDLANASLLDEATAAAEAMALAKRV 163 (954)
T ss_pred cCcHHHHHHHHhC--chhhhcCCCCCchhhhHHHHHHHHHHHHHHHHh------CchhhhhhhccchhHHHHHHHHHHHH
Confidence 3455553444331 12345666543 2 334555666665 3444555666677776665544432
Q ss_pred --CCCCEEEecCCCccchHHHHh----hCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHH
Q 014603 132 --RPGANILLPRPGFPYYEARAT----HSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHL 205 (422)
Q Consensus 132 --~~gd~Vl~~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l 205 (422)
.+..+|++++..|+-+....+ ..|++++. +++++.++.++.++++.+|+. .|.+ +++
T Consensus 164 ~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~-------------~~~~~~~~~~~~~v~vq~P~~-~G~i---~d~ 226 (954)
T PRK12566 164 AKSKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVV-------------DAVDNLAAHAVFGALLQYPDT-HGEI---RDL 226 (954)
T ss_pred hhcCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEE-------------cchhhcCCCCEEEEEEECCCC-ceEE---ccH
Confidence 224689999999987665443 34555542 233444555677788888876 8888 789
Q ss_pred HHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCc---cccCCCCceeEEEEeeCCCCcccchhHH
Q 014603 206 QKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSIS---KRWIVPGWRLGWLVTSDPNGILQDSGIV 282 (422)
Q Consensus 206 ~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~s---K~~~~~G~r~G~~~~~~~~~~~~~~~~~ 282 (422)
++|.+++++.|.++| +.+- .+..+. ..+...++.| |++++.. =-++..|.-.|++.+.+ ++.
T Consensus 227 ~~i~~~~h~~gal~~-~~~d-~laL~l--l~~Pge~GAD---I~vG~~Q~fGvp~~~GGP~ag~~a~~~--------~~~ 291 (954)
T PRK12566 227 RPLIDQLHGQQALAC-VAAD-LLSLLV--LTPPGELGAD---VVLGSTQRFGVPMGYGGPHAAYFACRD--------DYK 291 (954)
T ss_pred HHHHHHHHHcCCEEE-EEeC-HHHHhC--CCChhhcCCc---EEeeCCCcCCCCCCCCCCCeeeeeehH--------HHH
Confidence 999999999998866 2221 111111 1223455554 6666322 22223355578887753 233
Q ss_pred HHHH----------------------------hhhhhccCcchHHHHHHH--HHHhhchHHHHHHHHHHHHHHHHHHHHH
Q 014603 283 DSIK----------------------------SFLNISSDPATFIQGAVP--QILEKTEEEFFSKITDILRETADICCDR 332 (422)
Q Consensus 283 ~~~~----------------------------~~~~~~~~~~~~~~~a~~--~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 332 (422)
.++. +.+-+++-++.....|.. .++.....++++++.+++..+..++.+.
T Consensus 292 R~~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKAtSNICT~qaL~A~~a~~Y~~~~Gp~Gl~~ia~~~~~~a~~l~~~ 371 (954)
T PRK12566 292 RAMPGRIIGVSRDARGNTALRMALQTREQHIRREKANSNICTAQVLLANIAGFYAVYHGPEGLKRIAQRVHRLTAILAAG 371 (954)
T ss_pred hhCCCCccceeecCCCCeeeehhhhHHHHHhhhccccchhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH
Confidence 3331 111122111222222222 2222234678899999999999999999
Q ss_pred hhcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHH
Q 014603 333 LKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGR 410 (422)
Q Consensus 333 L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~ 410 (422)
|++ .|+++. ...+|--+.+... ....++..+ +.+.||-++--. .+.+.||+. ++.++++.++..
T Consensus 372 l~~-~g~~~~---~~~fF~~~~v~~~-----~~~~~~~~~-a~~~~~n~r~~~----~~~~~~s~de~~~~~~~~~~~~~ 437 (954)
T PRK12566 372 LEA-KGIKRL---NRHFFDTLTLEVG-----GAQAAIIES-AEAARINLRILG----RGRLGVSLDETCDEATVARLFDI 437 (954)
T ss_pred HHh-cCCccc---cCCccceEEEEcc-----CCHHHHHHH-HHHCCCeeEEeC----CCeEEEEeCCCCCHHHHHHHHHH
Confidence 999 487733 2234433333321 024445444 455687776532 467888887 678999999988
Q ss_pred HH
Q 014603 411 MK 412 (422)
Q Consensus 411 l~ 412 (422)
+.
T Consensus 438 f~ 439 (954)
T PRK12566 438 FL 439 (954)
T ss_pred hc
Confidence 84
No 390
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=98.68 E-value=1.5e-06 Score=75.29 Aligned_cols=174 Identities=17% Similarity=0.229 Sum_probs=111.8
Q ss_pred CCCC-CCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCC-Cccch----------HH
Q 014603 82 CYSS-TVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRP-GFPYY----------EA 149 (422)
Q Consensus 82 ~y~~-~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~-~~~~~----------~~ 149 (422)
.|+- .-|-+.|.+.-|+-++. ....-+..+. ++|.|+.+++..+++|||+.+.... -|... ..
T Consensus 59 GYGydD~GRdtLe~vyA~vf~a----E~a~VRpq~i-sGTHAI~~aLfg~LRpgDell~i~G~PYDTLeevIG~rg~~~g 133 (416)
T COG4100 59 GYGYDDLGRDTLERVYAQVFGA----EAALVRPQII-SGTHAIACALFGILRPGDELLYITGSPYDTLEEVIGLRGEGQG 133 (416)
T ss_pred CCCccccchhHHHHHHHHHhcc----ccceeeeeee-cchhHHHHHHHhccCCCCeEEEecCCcchhHHHHhccCCCCcc
Confidence 5543 34555666666666643 1111122333 6688999999999999999876532 23222 22
Q ss_pred HHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCC-CCCcccccCHHHHHHHHHHHHHc--CcEEEEccccc
Q 014603 150 RATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINP-GNPCGNVYTYQHLQKIAETAKKL--GIMVIADEVYD 226 (422)
Q Consensus 150 ~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p-~nptG~~~~~~~l~~i~~~~~~~--~~~li~D~~~~ 226 (422)
..+.+|+..+.+++.++ ..+|.+.++..++++++++.+--. ....--.++.+++++++++.++- |+++++|.+|+
T Consensus 134 SL~dfgi~Y~~v~Lt~~--gkiD~~~v~~~i~~~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYG 211 (416)
T COG4100 134 SLKDFGIKYKAVPLTAD--GKIDIQAVKTAISDRTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCYG 211 (416)
T ss_pred cHHHhCcceeecccccC--CcccHHHHHHhcCccceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccch
Confidence 34456677777777644 459999999999999998877643 22122236779999999999865 68999999999
Q ss_pred ccccCCCCCCCccccCCCCCeEEEecCccccCCCCc--eeEEEEee
Q 014603 227 HLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGW--RLGWLVTS 270 (422)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~--r~G~~~~~ 270 (422)
.+.-.-+ +. +.+.| ++.+|+-|. .+.|+ --||+.+.
T Consensus 212 EFvE~~E-Pt---~vGaD---liAGSLIKN-pGGgiaktGGYiaGk 249 (416)
T COG4100 212 EFVEEKE-PT---HVGAD---LIAGSLIKN-PGGGIAKTGGYIAGK 249 (416)
T ss_pred hhhhccC-cc---ccchh---hhccceeeC-CCCceeeccceeech
Confidence 8763321 22 22333 777888887 33332 13677664
No 391
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=98.61 E-value=4.5e-05 Score=66.47 Aligned_cols=342 Identities=13% Similarity=0.038 Sum_probs=192.8
Q ss_pred CCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCC-CCCCCC------C-CCCCHHHHHHHHHHHhhcCCCCCCCCCEEE
Q 014603 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSA-RFNCYS------S-TVGILPARRAIADYLNRDLPYKLSPDDVYL 115 (422)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~y~------~-~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~ 115 (422)
..+.|.|..+... ..|......|.+.++.= ...-|+ | ..+....-..++... +...++|.+
T Consensus 65 d~~~iYlcGNSLG-----LmPK~t~~~~~~eLDkWak~av~gH~~GkvPW~~~De~il~l~~~iV------GA~e~Evav 133 (465)
T KOG3846|consen 65 DKPVIYLCGNSLG-----LMPKSTRNSINAELDKWAKCAVEGHFKGKVPWVSIDEPILPLLAPIV------GAQENEVAV 133 (465)
T ss_pred CCCeEEEeccccc-----cCchhhHhHHHHHHHHHHhhhhhcccccccceeecchhhhhhhhhhc------cCCchhhhh
Confidence 4456777666533 34566666666665430 001111 1 233445556666666 457789999
Q ss_pred ecCHHHHHHHHHHHhcCCC---CEEEecCCCc----cchHHHHhhCCCeEE--EeeccC-CCCcccCHHHHHHhhcCC--
Q 014603 116 TLGCTQAIEVILTVLARPG---ANILLPRPGF----PYYEARATHSHLEVR--HFDLLP-AKGWEVDLDAVEALADEN-- 183 (422)
Q Consensus 116 ~~g~~~a~~~~~~~l~~~g---d~Vl~~~~~~----~~~~~~~~~~g~~~~--~~~~~~-~~~~~~d~~~l~~~~~~~-- 183 (422)
.++-|..+..++-++.+|- -+|+...-.| +.+....+..|..+. .+.+.| ++...+..+++.+.+.++
T Consensus 134 mNsLTvNlh~Ll~sFyKPTekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~~iePREGEetlRteDILd~IEkngD 213 (465)
T KOG3846|consen 134 MNSLTVNLHSLLISFYKPTEKRFKILLEKKAFPSDHYAIESQCKLHGISPENSMIQIEPREGEETLRTEDILDTIEKNGD 213 (465)
T ss_pred HhhhhhHHHHHHHHhcCCcchhhhhhhccCCCCchHHHHHhhhhhcCCChHHheEEecccccccchhHHHHHHHHHhcCC
Confidence 9999999999998887765 3688766555 445566666676542 233333 233446677777777543
Q ss_pred -ceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCc
Q 014603 184 -TVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGW 262 (422)
Q Consensus 184 -~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~ 262 (422)
..+++++..+.-||+.+ ++.+|-..-+..|+++=.|-+++. |.-+..+..++.| +.+....|.+....-
T Consensus 214 eiA~v~fSGvqyYTGQ~F---di~aIT~Agq~kgc~VGfDLAHAv----gNVpL~LHdWgVD---FACWCSYKYlnaGaG 283 (465)
T KOG3846|consen 214 EIALVCFSGVQYYTGQYF---DIGAITFAGQFKGCLVGFDLAHAV----GNVPLQLHDWGVD---FACWCSYKYLNAGAG 283 (465)
T ss_pred eEEEEEeecceeeccccc---chhhhhhcccCCCcEechhhhhhh----cCCceEEeecCCc---eEEEeeecccccCCC
Confidence 23345556688999997 466666555677999999999876 4333445555554 777777787432112
Q ss_pred eeEEEEeeCCCCcccchhHHHHHHh-----------------hh-hhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHH
Q 014603 263 RLGWLVTSDPNGILQDSGIVDSIKS-----------------FL-NISSDPATFIQGAVPQILEKTEEEFFSKITDILRE 324 (422)
Q Consensus 263 r~G~~~~~~~~~~~~~~~~~~~~~~-----------------~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 324 (422)
.+|-+....+..--+.|.+...+.. .. ...++|+.....++...|+...+-.+++++.+---
T Consensus 284 gIgGlFvHekh~~~~~prl~GWwgh~~s~RF~Mdnvl~lipGa~GfRiSNPpi~~v~al~~SLe~F~q~~~~~lRkrS~l 363 (465)
T KOG3846|consen 284 GIGGLFVHEKHTKESLPRLAGWWGHDPSKRFQMDNVLELIPGALGFRISNPPIIDVVALRSSLELFAQFNINELRKRSLL 363 (465)
T ss_pred ccceeeeehhhhcchhhHHhhhccCCcchhhhhccccccCccccccccCCCcHhHHHHHHhhHHHHHHhhHHHHhhhhhh
Confidence 2454544332211111222221111 00 11235555566666666665433345555544333
Q ss_pred HHHHHHHHhhcC-----------CCCCCCCCC----CCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC
Q 014603 325 TADICCDRLKEI-----------PCITCPKKP----EGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL 389 (422)
Q Consensus 325 ~~~~l~~~L~~~-----------~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~ 389 (422)
+..++...++.. +.+. .++| +.|.-+.+.+.. +...++.+| .++|+..-.- .
T Consensus 364 LTgYleyL~k~~~g~~~~~rt~Kl~~~-IiTP~~~~erGcQLsl~Fss-------p~~~vfqeL-~krGv~~DkR----~ 430 (465)
T KOG3846|consen 364 LTGYLEYLLKASKGYKHPLRTEKLFFT-IITPTSTDERGCQLSLYFSS-------PTPKVFQEL-HKRGVIGDKR----R 430 (465)
T ss_pred HHhHHHHHHHHhcccCchhhhcceeEE-EeCCcccccccceEEEEeCC-------CchHHHHHH-HHcCeecccc----C
Confidence 333333333321 1122 1233 224445555543 234555665 5669876442 2
Q ss_pred CCeEEEEec---cChHHHHHHHHHHHHHHHHhc
Q 014603 390 KDWLRITFA---VEPSALEDGLGRMKAFYDRHA 419 (422)
Q Consensus 390 ~~~iRis~~---~~~~~l~~~~~~l~~~~~~~~ 419 (422)
++.||+.+. ++-.++.+++..|.++.+...
T Consensus 431 PNvIRvAPvpLYN~f~Dvy~f~n~L~e~~d~~e 463 (465)
T KOG3846|consen 431 PNVIRVAPVPLYNTFSDVYIFVNALNEAMDKLE 463 (465)
T ss_pred CCceEeecchhhccHHHHHHHHHHHHHHHHHhh
Confidence 688999986 677899999999999887654
No 392
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=98.00 E-value=0.0007 Score=58.61 Aligned_cols=328 Identities=14% Similarity=0.131 Sum_probs=182.3
Q ss_pred CCCceeecCCCCCCCCCCCCcHHHHHHHH-HHhhCCCCC------CCCC---CCCCHHHHHHHHHHHhhcCCCCCCCCCE
Q 014603 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIV-HSVRSARFN------CYSS---TVGILPARRAIADYLNRDLPYKLSPDDV 113 (422)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~-~~~~~~~~~------~y~~---~~g~~~lr~~ia~~l~~~~~~~~~~~~i 113 (422)
...+|||+-|... .|..|...+. +.++-.... +-.+ ...+.+.+..+.++++ ++-+-+-+
T Consensus 5 ~~~vvnFaaGPAk------lp~~VL~e~qkdl~n~~g~GisV~EmSHRsk~f~kii~~tes~lreLln----iPdn~~vl 74 (370)
T KOG2790|consen 5 PERVVNFAAGPAK------LPESVLLEAQKDLLNFNGSGISVMEMSHRSKDFAKIINDTESLLRELLN----IPDNYKVL 74 (370)
T ss_pred ccceeecCCCccc------CCHHHHHHHHHHhhccCCCcceEEEecccchhHHHHHHHHHHHHHHHHc----CCCceeEE
Confidence 5678999988633 3344444444 444321110 0001 1234566666777763 23333345
Q ss_pred EEecCHHHHHHHHHHHhc--CCC---CEEEecCCCccchHHHHhhCCCe-EEEeeccCCC-CcccCHHHHHHhhcCCceE
Q 014603 114 YLTLGCTQAIEVILTVLA--RPG---ANILLPRPGFPYYEARATHSHLE-VRHFDLLPAK-GWEVDLDAVEALADENTVA 186 (422)
Q Consensus 114 ~~~~g~~~a~~~~~~~l~--~~g---d~Vl~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~-~~~~d~~~l~~~~~~~~~~ 186 (422)
++..|||.-+.++...++ +.| |.|++-...-..+..+ +.+|.. .+..+..+.. +--+|.+.|+. +++.+-
T Consensus 75 f~QGGGt~qFaAv~lNL~glK~g~~AdYiVTGsWS~KA~~EA-kk~~~~~~V~~~~k~y~ygkvPd~~~w~~--~~da~y 151 (370)
T KOG2790|consen 75 FLQGGGTGQFAAVPLNLIGLKHGRCADYVVTGSWSAKAAEEA-KKYGTPNIVIPKLKSYTYGKVPDPSTWEL--NPDASY 151 (370)
T ss_pred EEeCCCcccccccchhhhccccCCccceEEeccccHHHHHHH-HhhCCceEEeccccccccCcCCChhhccc--CCCccE
Confidence 667778888777766665 444 5666655444444433 344533 3333332211 11235555543 334456
Q ss_pred EEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEE
Q 014603 187 LVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGW 266 (422)
Q Consensus 187 i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~ 266 (422)
+++|.-....|+-++.-. +-..+|.++|.|.+.-.+. .+.++..++ +++.+..|..|.+|+ ..
T Consensus 152 vyyCaNETVHGVEf~~~P------~~~~~~~vlVaDmSSnflS----rpvDvsk~g-----vi~aGAQKN~G~aG~--Tv 214 (370)
T KOG2790|consen 152 VYYCANETVHGVEFDFIP------VNDPKGAVLVADMSSNFLS----RPVDVSKFG-----VIFAGAQKNVGPAGV--TV 214 (370)
T ss_pred EEEecCceeeceecCCCC------CCCCCCceEEEecccchhc----CCccchhcc-----eEEeccccccCcccc--EE
Confidence 777765556666542211 1225688999998876543 223444433 778889999999995 34
Q ss_pred EEeeCCCCcccchhHHHHHHh-------------hhhhccCcchHHHHHHHHHHhhch-HHHHHHHHHHHHHHHHHHHHH
Q 014603 267 LVTSDPNGILQDSGIVDSIKS-------------FLNISSDPATFIQGAVPQILEKTE-EEFFSKITDILRETADICCDR 332 (422)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~ 332 (422)
++.++ +++..... ......+++.+..+++.-.++... ..++....+.-.+..+.+.+.
T Consensus 215 vivr~--------dllg~~~~~tP~v~dyk~~~~NnSlyNTpP~f~iy~~~Lv~~~il~~GGl~a~e~~n~~KskllYd~ 286 (370)
T KOG2790|consen 215 VIVRK--------DLLGNALDITPSVLDYKIMDKNNSLYNTPPCFGIYVMGLVFEWILEKGGLAAMEKLNQEKSKLLYDA 286 (370)
T ss_pred EEEeh--------hhhcccccCCccccceeeeccccccccCCCeeeeeehhhHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 44432 23322211 112334777777777766666533 455777777777888999999
Q ss_pred hhcCCCCC-CCCCCCC--ceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHH
Q 014603 333 LKEIPCIT-CPKKPEG--SMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDG 407 (422)
Q Consensus 333 L~~~~~~~-~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~ 407 (422)
+.+..++. |...|.. -+-+.+++.... -..+++...+++ ++.-..|+. .-+.+|-|+- .+.++.+++
T Consensus 287 iD~s~gfy~cpVe~~~RS~MNV~Fri~~d~-----Le~eFLkeA~~~-~mv~LKGhR--SVGGiRASlYNAisv~~~q~L 358 (370)
T KOG2790|consen 287 IDNSNGFYRCPVEPSVRSRMNVPFRIEKDE-----LEAEFLKEAAKE-HMVQLKGHR--SVGGIRASLYNAISVEEVQKL 358 (370)
T ss_pred HHhcCCeEEcccchhhhhhcccceeecchH-----HHHHHHHHHHHh-hhhcccccc--ccccchhhhhccccHHHHHHH
Confidence 99875643 3333432 233444554321 234555555444 444444443 2467899986 688999998
Q ss_pred HHHHHHHHHH
Q 014603 408 LGRMKAFYDR 417 (422)
Q Consensus 408 ~~~l~~~~~~ 417 (422)
++-++++.+.
T Consensus 359 ~~~m~~F~k~ 368 (370)
T KOG2790|consen 359 AAFMKEFQKK 368 (370)
T ss_pred HHHHHHHHHh
Confidence 8888877654
No 393
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=97.99 E-value=0.0017 Score=62.65 Aligned_cols=301 Identities=15% Similarity=0.127 Sum_probs=167.2
Q ss_pred CCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCH-HHHH---HHHHHHh-cCCC----CEEEecCCCccchHHHHhhCCCe
Q 014603 87 VGILPARRAIADYLNRDLPYKLSPDDVYLTLGC-TQAI---EVILTVL-ARPG----ANILLPRPGFPYYEARATHSHLE 157 (422)
Q Consensus 87 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~-~~a~---~~~~~~l-~~~g----d~Vl~~~~~~~~~~~~~~~~g~~ 157 (422)
+|+.++-..+-++|..- ..-|.+.+.+++ .++- ..++++. ..+| ..-+++-..|..-...+...|.+
T Consensus 578 qGY~~lf~~Le~~Lc~i----TG~D~~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNPASA~Magmk 653 (1001)
T KOG2040|consen 578 QGYQQLFTELEKDLCEI----TGFDSFSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNPASAAMAGMK 653 (1001)
T ss_pred hhHHHHHHHHHHHhhee----ecccceeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCChhhHHhcCCE
Confidence 45566666666666442 244667665442 2222 2234443 2333 24467778887778888899999
Q ss_pred EEEeeccCCCCcccCHHHHHHhhcC---CceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCC
Q 014603 158 VRHFDLLPAKGWEVDLDAVEALADE---NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTP 234 (422)
Q Consensus 158 ~~~~~~~~~~~~~~d~~~l~~~~~~---~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~ 234 (422)
++.+..+.. +.+|..+|++...+ +-.++.++.|+. .|+-= +.+++++++.++||--|..|.+-..-..+
T Consensus 654 vvpV~~~~~--G~id~~dLk~kaekh~~~Laa~MvTYPST-~GvfE--~~i~d~cd~iHehGGQVYlDGANMNAqVG--- 725 (1001)
T KOG2040|consen 654 VVPVGCDAN--GNIDMVDLKAKAEKHKDNLAALMVTYPST-HGVFE--EGIDDICDIIHEHGGQVYLDGANMNAQVG--- 725 (1001)
T ss_pred EEEeeccCC--CCccHHHHHHHHHHhhhhhheeEEecccc-ccccc--ccHHHHHHHHHhcCCEEEecCCCccceec---
Confidence 998887643 45899999876544 456778888875 45441 56899999999999999999986432211
Q ss_pred CCCccccCCCCCeEEEecCccccCCC----CceeEEEEeeCCCCcccchhHHHHHHh--------------hhhhccC--
Q 014603 235 FVPMGVFGSIVPVLTLGSISKRWIVP----GWRLGWLVTSDPNGILQDSGIVDSIKS--------------FLNISSD-- 294 (422)
Q Consensus 235 ~~~~~~~~~~~~~i~i~s~sK~~~~~----G~r~G~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~-- 294 (422)
......++.| +.=--++|+|+.| |..+|=+.+.. .+...+.. ....+..
T Consensus 726 lc~pGd~GaD---V~HLNLHKTFcIPHGGGGPg~gPIgVK~--------HLapfLP~HpVvs~~~~~~~~~~gsVsaaP~ 794 (1001)
T KOG2040|consen 726 LCRPGDIGAD---VCHLNLHKTFCIPHGGGGPGMGPIGVKK--------HLAPFLPSHPVVSPGRPEDTSPVGSVSAAPW 794 (1001)
T ss_pred ccCCcccccc---ceeecccceeeecCCCCCCCCCccchhh--------hccccCCCCCccCCCCCCCCCCccceeccCC
Confidence 1122233333 2223456776433 44455444321 11111110 0000000
Q ss_pred cch---HHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceE---EEEecCcccccCCCCHHH
Q 014603 295 PAT---FIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMF---VMVKLNYSLLEGINSDME 368 (422)
Q Consensus 295 ~~~---~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~ 368 (422)
.+. +..++..+.+. ..++.+..+..--+..++.++|+.+ .+++.....|.. +.+.+...+.....++.+
T Consensus 795 Gsa~ILpISwaYikmMG---~~GL~~as~~AiLNaNYMakRLe~h--Ykil~~~~~~~vaHEFIlD~r~fK~~agieavD 869 (1001)
T KOG2040|consen 795 GSALILPISWAYIKMMG---SGGLKDASKIAILNANYMAKRLESH--YKILFRGENGLVAHEFILDLRPFKKTAGIEAVD 869 (1001)
T ss_pred CcceeehhHHHHHHHhc---ccccchhhHHHhhhhHHHHHHHhhc--cceeEecCCcceeeeeeeechhhccccCCcHHH
Confidence 111 12233333333 3445555555556778888889875 222223333321 223332222112236778
Q ss_pred HHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHHHHHHHHH
Q 014603 369 FALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGRMKAFYDR 417 (422)
Q Consensus 369 ~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~l~~~~~~ 417 (422)
++.+| ..+|..... -.+...+.+.|-++ -+.+|+|++++++..+-++
T Consensus 870 vAKRL-~DYgFHaPT-mswPV~gtLMIEPTESE~k~ElDRfcdAliSIreE 918 (1001)
T KOG2040|consen 870 VAKRL-MDYGFHAPT-MSWPVAGTLMIEPTESEDKAELDRFCDALISIREE 918 (1001)
T ss_pred HHHHH-HhccCCCCc-cccccCCceEeccCccccHHHHHHHHHHHHHHHHH
Confidence 87776 678987643 33445777888876 4568999999988765444
No 394
>PLN02672 methionine S-methyltransferase
Probab=96.86 E-value=0.073 Score=56.42 Aligned_cols=252 Identities=12% Similarity=0.128 Sum_probs=142.9
Q ss_pred CccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcC
Q 014603 25 GITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDL 104 (422)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~ 104 (422)
+..++.+++.++.-. ..-..-+||+-.+-+.- -..-| ....+...+.+.....|.++.|...+|..||.|+....
T Consensus 369 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (1082)
T PLN02672 369 PNQVKTIFKFLKNGF--HEVSGSLDLSFEDESVA--DEKIP-FLAYLASALKGLSYFPCEPPAGSKRFRNLIAGFMRIYH 443 (1082)
T ss_pred chHHHHHHHHHHccc--hhhhhhccccccccccc--hhhcc-HHHHHHHHHccCCCCCCCCCccchHHHHHHHHHHHHhc
Confidence 455677776554221 11234566765442210 01112 34667777777777889999999999999999999999
Q ss_pred CCCCCCCCEEEecCHHHHHHHHHHHhc------CCCCEEEecCCCccchHHHHhhCC--------CeEEEeeccCCCCcc
Q 014603 105 PYKLSPDDVYLTLGCTQAIEVILTVLA------RPGANILLPRPGFPYYEARATHSH--------LEVRHFDLLPAKGWE 170 (422)
Q Consensus 105 ~~~~~~~~i~~~~g~~~a~~~~~~~l~------~~gd~Vl~~~~~~~~~~~~~~~~g--------~~~~~~~~~~~~~~~ 170 (422)
+++..+++|++.++-..|++.+++.+. ..+-+-.++ .-|.......+ ..+..+. .|-
T Consensus 444 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---- 514 (1082)
T PLN02672 444 HIPLTPDNVVVFPSRAVAIENALRLFSPRLAIVDEHLTRWLP----KKWLTSLAIENATSDSKSDDVITVIE-APR---- 514 (1082)
T ss_pred CCcCCccceEEeccHHHHHHHHHHhhChHHHhhhhhhhccCC----HHHHhHhhhhcccccCccCCeEEEEe-CCC----
Confidence 999999999999999999998887653 222121111 11222222222 1111111 111
Q ss_pred cCHHHHHHhhcC-CceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEccccc-ccccCCCCCCCccccC---CCC
Q 014603 171 VDLDAVEALADE-NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYD-HLAFGNTPFVPMGVFG---SIV 245 (422)
Q Consensus 171 ~d~~~l~~~~~~-~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~-~~~~~~~~~~~~~~~~---~~~ 245 (422)
..+.+.+++++ ++++++..-... -..+....+.|...+++-|+.++.|.+-. .+.-.......++-+. ...
T Consensus 515 -~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 590 (1082)
T PLN02672 515 -QSDLVIELIKKLKPQVVVTGMADF---EMRTSTAFEHLLNVTAEIGARLFLDISDHLELSSLPGSNGVLKYLAGHPLPS 590 (1082)
T ss_pred -cchHHHHHHHhCCCeEEEEeccch---hhhhHHHHHHHHHHHHhhCcEEEEehhhheeeccCCCcccHHHHhcCCCCCc
Confidence 11234444443 344444332222 12233568999999999999999998843 2211111111111111 112
Q ss_pred CeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhh-hccCcchHHHH
Q 014603 246 PVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQG 301 (422)
Q Consensus 246 ~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 301 (422)
+..++.++-|.--.+.+-+.+++.-+ ..+...+..... ..+..+.++|+
T Consensus 591 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~ 640 (1082)
T PLN02672 591 HAAIICGLVKNQVYSDLEVAFVISEN-------EAVLKALSKTGEVLEGRTAIISQF 640 (1082)
T ss_pred chhHhhhhhhccccccceEEEEecCc-------HHHHHHHHHHHHhhccchHHHHHH
Confidence 45667788888667899999988643 345555554432 23344555554
No 395
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=96.65 E-value=0.015 Score=50.01 Aligned_cols=127 Identities=20% Similarity=0.225 Sum_probs=66.7
Q ss_pred CCC-CEEEecCCCccchHHHHhhCCCeEEEeec-cCCCCcccCHHHHHHhhcC-CceEEEEeCCCCCcccccCHHHHHHH
Q 014603 132 RPG-ANILLPRPGFPYYEARATHSHLEVRHFDL-LPAKGWEVDLDAVEALADE-NTVALVIINPGNPCGNVYTYQHLQKI 208 (422)
Q Consensus 132 ~~g-d~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~d~~~l~~~~~~-~~~~i~i~~p~nptG~~~~~~~l~~i 208 (422)
+|. ..|+-+.-.-.+.....-..|.+++.+.- ...+....|++.++..+.+ +...++..+.....=..-+++.+++|
T Consensus 100 rpkakyiiw~ridqks~~ksi~~agfepiiie~i~d~d~l~tdleav~~~iee~g~dcilci~sttscfapr~pd~leai 179 (432)
T KOG3843|consen 100 RPKAKYIIWLRIDQKSCFKSIIHAGFEPIIIENILDGDELITDLEAVEAIIEELGEDCILCIHSTTSCFAPRSPDNLEAI 179 (432)
T ss_pred CCcccEEEEEecchHHHHHHHHhcCCCceeeeccccchHHHHhHHHHHHHHHHhCCceEEEEeecccccCCCCCchHHHH
Confidence 344 34443433333333444457877665543 2223344578888777654 23323222221111112244789999
Q ss_pred HHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCC-eEEEecCccccCCC
Q 014603 209 AETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP-VLTLGSISKRWIVP 260 (422)
Q Consensus 209 ~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~-~i~i~s~sK~~~~~ 260 (422)
..+|-.|++.-|+..+|+.-. .+-...+..-..-.+ ..++.|+.|.|..|
T Consensus 180 aaica~~diphivnnayglqs--ee~i~~iaa~~~~grida~vqsldknf~vp 230 (432)
T KOG3843|consen 180 AAICAAHDIPHIVNNAYGLQS--EECIHKIAAAAECGRIDAFVQSLDKNFMVP 230 (432)
T ss_pred HHHHHccCchhhhccccccch--HHHHHHHHHHhhhccHHHHHHHhhhcceee
Confidence 999999999999999997521 000000000000011 15678999998765
No 396
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=96.53 E-value=0.34 Score=47.52 Aligned_cols=261 Identities=16% Similarity=0.174 Sum_probs=130.9
Q ss_pred CCEEEecCHHHHHHHHHHHh-cCCCCEEEecCCCccchHHHHhh----CCCeEEEeeccCCCCcccCHHHHHHhhcCCce
Q 014603 111 DDVYLTLGCTQAIEVILTVL-ARPGANILLPRPGFPYYEARATH----SHLEVRHFDLLPAKGWEVDLDAVEALADENTV 185 (422)
Q Consensus 111 ~~i~~~~g~~~a~~~~~~~l-~~~gd~Vl~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~ 185 (422)
.+.-+-.-||+|-++...+. ..++.+.++...+|+-.....+. +|+++.. .|+++... ..++..
T Consensus 181 aNASLLDEgTAaaEAm~l~~~~~krkk~vvd~~~hpqtlsV~~TRa~~~~i~v~~----------~~~~~~~~-s~~~v~ 249 (1001)
T KOG2040|consen 181 ANASLLDEGTAAAEAMALCNRINKRKKFVVDSNCHPQTLSVVKTRAKGFGIKVVV----------SDIKEADY-SSKDVS 249 (1001)
T ss_pred cchhhhccchhHHHHHHHHHhhcccceEEecCCCCcchhhhhhccccccceeEEe----------cCHHHhhc-ccccee
Confidence 34433334455544443332 23456799999999876554442 2333221 12222221 234566
Q ss_pred EEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeE
Q 014603 186 ALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLG 265 (422)
Q Consensus 186 ~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G 265 (422)
.+++-.|.. -|.+. +..++++.++..|.+++.-.-- +..+ ...+..+++.| |.++|...+ |.| +|
T Consensus 250 gvlvQYP~t-~G~i~---d~~el~~~a~~~~s~vv~atDL--LaLt--iLrpPgefGaD---IavGSsQRF-GVP---lG 314 (1001)
T KOG2040|consen 250 GVLVQYPDT-EGSVL---DFDELVELAHANGSLVVMATDL--LALT--ILRPPGEFGAD---IAVGSSQRF-GVP---LG 314 (1001)
T ss_pred EEEEEcCCC-CCccc---CHHHHHHHhhccCceEEEeehh--hHHH--ccCChhhcCce---eeecccccc-Ccc---cc
Confidence 677777765 56663 5777788888988876632111 1111 11123345544 778776665 433 33
Q ss_pred EE-------Eee--------------CCCCcccchhHHHHHHhhh-h--hc-cCcchHHHHHHHH----HHhh-chHHHH
Q 014603 266 WL-------VTS--------------DPNGILQDSGIVDSIKSFL-N--IS-SDPATFIQGAVPQ----ILEK-TEEEFF 315 (422)
Q Consensus 266 ~~-------~~~--------------~~~~~~~~~~~~~~~~~~~-~--~~-~~~~~~~~~a~~~----~l~~-~~~~~~ 315 (422)
|- .+. ..+ ...++.+.-.+...- + .. .+.+.-...|+.+ .... +....+
T Consensus 315 YGGPHAaFfAv~~~l~R~mPGRiiGvtkD-~~gk~a~RLALQTREQHIrRDKATSNICTAQALLANmaAmyaiYHGp~gL 393 (1001)
T KOG2040|consen 315 YGGPHAAFFAVSESLVRMMPGRIIGVTKD-ALGKEAYRLALQTREQHIRRDKATSNICTAQALLANMAAMYAIYHGPHGL 393 (1001)
T ss_pred CCCchHHHHHHHHHHHhhCCCceEeeeec-ccccHHHHHHHHHHHHHhhhhccchhhhHHHHHHHHHHHHHhhhcCcHHH
Confidence 31 110 000 000111222221110 0 00 0111111111111 1111 235778
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEE
Q 014603 316 SKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRI 395 (422)
Q Consensus 316 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi 395 (422)
+++.+++....-.|...|++. +.++... .+|-.+.+..+. +.+++..+.+++ +|-++-- ..+.+-+
T Consensus 394 ~~IArrvh~~T~~l~~~l~~a-ghel~~k---~fFDTLkI~~~~-----s~~~~l~rA~~~-~iNlr~~----ed~tigv 459 (1001)
T KOG2040|consen 394 KEIARRVHNLTLILAEGLKNA-GHELQHK---PFFDTLKIRCGC-----SAEEVLDRAAKR-QINLRLV----EDGTIGV 459 (1001)
T ss_pred HHHHHHHHHHHHHHHHHHhhc-chhhccc---cccceEEEEecC-----cHHHHHHHHHhh-cCceEEe----ecCceEE
Confidence 999999999999999999976 4442322 245444443321 356666665444 5544321 2567888
Q ss_pred Eec--cChHHHHHHHHHHH
Q 014603 396 TFA--VEPSALEDGLGRMK 412 (422)
Q Consensus 396 s~~--~~~~~l~~~~~~l~ 412 (422)
++. ++++|++.++..+.
T Consensus 460 slDETv~~~DvddLl~vf~ 478 (1001)
T KOG2040|consen 460 SLDETVTEKDVDDLLWVFN 478 (1001)
T ss_pred eecccccHHHHHHHHHHHc
Confidence 886 67889999888765
No 397
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=86.74 E-value=9.2 Score=32.71 Aligned_cols=99 Identities=16% Similarity=0.283 Sum_probs=64.7
Q ss_pred CEEEecCHHHHHHHHHHHhcCCCCEEE---e--cCCC--c-------cchHHHHhhCCCeEEEeeccCCCCcccCHHHHH
Q 014603 112 DVYLTLGCTQAIEVILTVLARPGANIL---L--PRPG--F-------PYYEARATHSHLEVRHFDLLPAKGWEVDLDAVE 177 (422)
Q Consensus 112 ~i~~~~g~~~a~~~~~~~l~~~gd~Vl---~--~~~~--~-------~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~ 177 (422)
-+.+.+||-.++.++..++. .|..|. + ++.. | ......++..|+++......-+ ..-..++|.
T Consensus 3 ~~aL~SGGKDS~~Al~~a~~-~G~eV~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae~~gi~l~~~~~~g~--~e~eve~L~ 79 (223)
T COG2102 3 VIALYSGGKDSFYALYLALE-EGHEVVYLLTVKPENGDSYMFHTPNLELAELQAEAMGIPLVTFDTSGE--EEREVEELK 79 (223)
T ss_pred EEEEEecCcHHHHHHHHHHH-cCCeeEEEEEEecCCCCeeeeeccchHHHHHHHHhcCCceEEEecCcc--chhhHHHHH
Confidence 46788999999888777763 443322 1 2111 2 1224566677888776665321 223566777
Q ss_pred HhhcC-CceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEE
Q 014603 178 ALADE-NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVI 220 (422)
Q Consensus 178 ~~~~~-~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li 220 (422)
+.+.. +..+++ +|.+++..+...+-++|++.|+.++
T Consensus 80 ~~l~~l~~d~iv-------~GaI~s~yqk~rve~lc~~lGl~~~ 116 (223)
T COG2102 80 EALRRLKVDGIV-------AGAIASEYQKERVERLCEELGLKVY 116 (223)
T ss_pred HHHHhCcccEEE-------EchhhhHHHHHHHHHHHHHhCCEEe
Confidence 76654 334555 8999999999999999999988765
No 398
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=80.40 E-value=18 Score=32.96 Aligned_cols=57 Identities=16% Similarity=0.213 Sum_probs=37.2
Q ss_pred cccCHHHHHHhhc---C--CceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccc
Q 014603 169 WEVDLDAVEALAD---E--NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDH 227 (422)
Q Consensus 169 ~~~d~~~l~~~~~---~--~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~ 227 (422)
..++.+++++.++ . ...-+++.+.+=|.|.. .+...+|+++|++.|..+++|..-..
T Consensus 109 p~is~~~~~~~l~~~~~~l~~~d~VvlsGSlP~g~~--~d~y~~li~~~~~~g~~vilD~Sg~~ 170 (310)
T COG1105 109 PEISEAELEQFLEQLKALLESDDIVVLSGSLPPGVP--PDAYAELIRILRQQGAKVILDTSGEA 170 (310)
T ss_pred CCCCHHHHHHHHHHHHHhcccCCEEEEeCCCCCCCC--HHHHHHHHHHHHhcCCeEEEECChHH
Confidence 3456565554332 2 12223444555566654 47899999999999999999987654
No 399
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=78.97 E-value=13 Score=34.17 Aligned_cols=101 Identities=22% Similarity=0.226 Sum_probs=67.7
Q ss_pred cCHHHHHHHHHHHhcCCCCEEEecC-CCccc-----hHHHHhhCCCeEEEeeccCCCCcccCHH-----HHHHhhcCCce
Q 014603 117 LGCTQAIEVILTVLARPGANILLPR-PGFPY-----YEARATHSHLEVRHFDLLPAKGWEVDLD-----AVEALADENTV 185 (422)
Q Consensus 117 ~g~~~a~~~~~~~l~~~gd~Vl~~~-~~~~~-----~~~~~~~~g~~~~~~~~~~~~~~~~d~~-----~l~~~~~~~~~ 185 (422)
.|=|-.+..+.+-+.+.|-.|++.. -+|-. ...++++.|.+++.-+ .+-|+. .++++..++..
T Consensus 150 ~GKTTTIaKLA~~l~~~g~~VllaA~DTFRAaAiEQL~~w~er~gv~vI~~~------~G~DpAaVafDAi~~Akar~~D 223 (340)
T COG0552 150 VGKTTTIAKLAKYLKQQGKSVLLAAGDTFRAAAIEQLEVWGERLGVPVISGK------EGADPAAVAFDAIQAAKARGID 223 (340)
T ss_pred CchHhHHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHHHHHHhCCeEEccC------CCCCcHHHHHHHHHHHHHcCCC
Confidence 3447777788888888888877754 34421 1345566677765432 123544 45666666777
Q ss_pred EEEEeCC---CCCcccccCHHHHHHHHHHHHHcC------cEEEEccccc
Q 014603 186 ALVIINP---GNPCGNVYTYQHLQKIAETAKKLG------IMVIADEVYD 226 (422)
Q Consensus 186 ~i~i~~p---~nptG~~~~~~~l~~i~~~~~~~~------~~li~D~~~~ 226 (422)
.+++-.. ||-...+ +++++|.+++++.. ++++.|..-+
T Consensus 224 vvliDTAGRLhnk~nLM---~EL~KI~rV~~k~~~~ap~e~llvlDAttG 270 (340)
T COG0552 224 VVLIDTAGRLHNKKNLM---DELKKIVRVIKKDDPDAPHEILLVLDATTG 270 (340)
T ss_pred EEEEeCcccccCchhHH---HHHHHHHHHhccccCCCCceEEEEEEcccC
Confidence 7766655 7888777 89999999999865 6777798765
No 400
>KOG1465 consensus Translation initiation factor 2B, beta subunit (eIF-2Bbeta/GCD7) [Translation, ribosomal structure and biogenesis]
Probab=76.34 E-value=59 Score=29.32 Aligned_cols=151 Identities=19% Similarity=0.174 Sum_probs=79.0
Q ss_pred CCCCCEEEecCHHHHHHHHHHHhcCCCC--EEEecC--CCccchHHHHh--hCCCeEEEeeccCCCCcccCHHHHHHhhc
Q 014603 108 LSPDDVYLTLGCTQAIEVILTVLARPGA--NILLPR--PGFPYYEARAT--HSHLEVRHFDLLPAKGWEVDLDAVEALAD 181 (422)
Q Consensus 108 ~~~~~i~~~~g~~~a~~~~~~~l~~~gd--~Vl~~~--~~~~~~~~~~~--~~g~~~~~~~~~~~~~~~~d~~~l~~~~~ 181 (422)
+...+|++|.|.+..+...+....++|. .|++.+ |.+.+...+.. ..|++...++ | ..+-+.++
T Consensus 160 ihsnEviLT~g~SrTV~~FL~~A~kk~Rkf~viVaE~~p~~qgH~~Ak~la~~giettVI~---------d-aaVfA~Ms 229 (353)
T KOG1465|consen 160 IHSNEVILTLGSSRTVENFLKHAAKKGRKFRVIVAEGAPNNQGHELAKPLAQAGIETTVIP---------D-AAVFAMMS 229 (353)
T ss_pred hccCceEEecCccHHHHHHHHHHHhccCceEEEEeecCCcccchHhhHHHHHcCCeeEEec---------c-HHHHHHhh
Confidence 3556899999988887777766655543 555653 44444322222 2345543332 3 34445455
Q ss_pred CCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCC-C
Q 014603 182 ENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIV-P 260 (422)
Q Consensus 182 ~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~-~ 260 (422)
+-.++++-++.--+.|-+....-...++..|+.|-+++++=.-..- ..++...+.+ ....++|.++.+-. .
T Consensus 230 rVnKVIigt~avl~NGgl~~~~G~~~vAlaAk~h~vPv~VlAp~yK-------LsPlyp~~~d-s~~~f~s~~~il~~~e 301 (353)
T KOG1465|consen 230 RVNKVIIGTHAVLANGGLRAPSGVHTVALAAKHHSVPVIVLAPMYK-------LSPLYPTNPD-SFHEFRSPSEILPFSE 301 (353)
T ss_pred hcceEEEEeeeEecCCCeeccchHHHHHHHHHhcCCcEEEecchhh-------cCCCCCCCHH-HHHhcCCcccccCccc
Confidence 4445555555544444444445566778888899888886433211 1223333221 23456667776533 2
Q ss_pred CceeEEEEeeCCCCcc
Q 014603 261 GWRLGWLVTSDPNGIL 276 (422)
Q Consensus 261 G~r~G~~~~~~~~~~~ 276 (422)
|...|-+-+-+|..++
T Consensus 302 ~~~~~~~~v~nP~fDy 317 (353)
T KOG1465|consen 302 GDPAGRVDVLNPAFDY 317 (353)
T ss_pred cCcccceeeccccccc
Confidence 3344444443443333
No 401
>PRK10595 SOS cell division inhibitor; Provisional
Probab=73.38 E-value=49 Score=27.04 Aligned_cols=86 Identities=14% Similarity=0.040 Sum_probs=54.3
Q ss_pred hcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHH
Q 014603 130 LARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIA 209 (422)
Q Consensus 130 l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~ 209 (422)
+...+.-|+...|-+..+.......|+....+-.....+-.-.+...|+.++.+...++++...+ .++.+++++|-
T Consensus 52 l~~~~rwilwI~PP~~p~~~~L~~~Gl~l~rvl~v~~~~~~d~Lwa~EqaLrsG~~~aVL~Wlp~----~l~~~~~RRLQ 127 (164)
T PRK10595 52 LGQQSRWQLWLTPQQKLSREWLQASGLPLTKVMQLSQLSPCHTVEAMERALRTGNYSVVLGWLPD----ELTEEEHARLV 127 (164)
T ss_pred HhccCceEEEECCCCCCCHHHHHHcCCCcccEEEEecCCcHHHHHHHHHHHhhCCCcEEEECCcc----cCCHHHHHHHH
Confidence 34455677777888878888888889876443322111111234566888887777777887431 14457788888
Q ss_pred HHHHHcCcEE
Q 014603 210 ETAKKLGIMV 219 (422)
Q Consensus 210 ~~~~~~~~~l 219 (422)
-.|.+-+.+.
T Consensus 128 lAAe~g~~l~ 137 (164)
T PRK10595 128 DAAQEGNAMG 137 (164)
T ss_pred HHHHhCCCEE
Confidence 7777765543
No 402
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=71.52 E-value=39 Score=29.30 Aligned_cols=91 Identities=16% Similarity=0.158 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHhcCCCCEE-EecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcc
Q 014603 119 CTQAIEVILTVLARPGANI-LLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCG 197 (422)
Q Consensus 119 ~~~a~~~~~~~l~~~gd~V-l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG 197 (422)
|..+-. ++++|.+++-.| ++.++.-......++..|..++.... -|.+.|.++++ +...++++.+....
T Consensus 8 G~~G~~-v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~-------~~~~~l~~al~-g~d~v~~~~~~~~~- 77 (233)
T PF05368_consen 8 GNQGRS-VVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVVEADY-------DDPESLVAALK-GVDAVFSVTPPSHP- 77 (233)
T ss_dssp SHHHHH-HHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEEES-T-------T-HHHHHHHHT-TCSEEEEESSCSCC-
T ss_pred cHHHHH-HHHHHHhCCCCcEEEEeccchhhhhhhhcccceEeeccc-------CCHHHHHHHHc-CCceEEeecCcchh-
Confidence 444433 344444455443 33454433334445567887764432 27789998887 44455555553321
Q ss_pred cccCHHHHHHHHHHHHHcCcEEEE
Q 014603 198 NVYTYQHLQKIAETAKKLGIMVIA 221 (422)
Q Consensus 198 ~~~~~~~l~~i~~~~~~~~~~li~ 221 (422)
...+.-..+++.|++.|+-.++
T Consensus 78 --~~~~~~~~li~Aa~~agVk~~v 99 (233)
T PF05368_consen 78 --SELEQQKNLIDAAKAAGVKHFV 99 (233)
T ss_dssp --CHHHHHHHHHHHHHHHT-SEEE
T ss_pred --hhhhhhhhHHHhhhccccceEE
Confidence 2225668889999998875553
No 403
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=70.25 E-value=44 Score=31.19 Aligned_cols=109 Identities=13% Similarity=0.123 Sum_probs=59.4
Q ss_pred CCCEEEecCHHHHHHHHHHHhcCCCCEE--EecCCCcc------chHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhc
Q 014603 110 PDDVYLTLGCTQAIEVILTVLARPGANI--LLPRPGFP------YYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALAD 181 (422)
Q Consensus 110 ~~~i~~~~g~~~a~~~~~~~l~~~gd~V--l~~~~~~~------~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~ 181 (422)
.+.++..+||-.+..++..+...-|..+ +..++.+. .....++..|+....+.. |.+.+.+...
T Consensus 60 yD~iV~lSGGkDSs~la~ll~~~~gl~~l~vt~~~~~~~e~~~~n~~~~~~~lgvd~~~i~~--------d~~~~~~l~~ 131 (343)
T TIGR03573 60 YDCIIGVSGGKDSTYQAHVLKKKLGLNPLLVTVDPGWNTELGVKNLNNLIKKLGFDLHTITI--------NPETFRKLQR 131 (343)
T ss_pred CCEEEECCCCHHHHHHHHHHHHHhCCceEEEEECCCCCCHHHHHHHHHHHHHcCCCeEEEeC--------CHHHHHHHHH
Confidence 5678888998887777643322224333 44566653 234455567777666553 3333333221
Q ss_pred CCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCC
Q 014603 182 ENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGN 232 (422)
Q Consensus 182 ~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~ 232 (422)
.... -..+|-.+... .....+.++|+++|+.+|+......-.++|
T Consensus 132 ~~~~--~~~~pc~~c~~----~~~~~l~~~A~~~gi~~Il~G~~~dE~fgG 176 (343)
T TIGR03573 132 AYFK--KVGDPEWPQDH----AIFASVYQVALKFNIPLIIWGENIAEEYGG 176 (343)
T ss_pred HHHh--ccCCCchhhhh----HHHHHHHHHHHHhCCCEEEeCCCHHHhcCC
Confidence 1100 01122222221 235677889999999999887766544443
No 404
>PRK10886 DnaA initiator-associating protein DiaA; Provisional
Probab=69.40 E-value=47 Score=28.15 Aligned_cols=41 Identities=29% Similarity=0.384 Sum_probs=29.2
Q ss_pred HHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEE
Q 014603 174 DAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIA 221 (422)
Q Consensus 174 ~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 221 (422)
..++...+++..+++++. +|.. +.+.++++.+++.|+.+|.
T Consensus 101 ~ql~~~~~~gDvli~iS~----SG~s---~~v~~a~~~Ak~~G~~vI~ 141 (196)
T PRK10886 101 KQVRALGHAGDVLLAIST----RGNS---RDIVKAVEAAVTRDMTIVA 141 (196)
T ss_pred HHHHHcCCCCCEEEEEeC----CCCC---HHHHHHHHHHHHCCCEEEE
Confidence 344555566666666666 3444 6789999999999999884
No 405
>TIGR00623 sula cell division inhibitor SulA. All proteins in this family for which the functions are known are cell division inhibitors. In E. coli, SulA is one of the SOS regulated genes.
Probab=67.30 E-value=69 Score=26.27 Aligned_cols=85 Identities=13% Similarity=0.029 Sum_probs=54.1
Q ss_pred hcCCCCEEEecCCCccchHHHHhhCCCeEEEeec-cCCCCcccCHHHHHHhhcCCceEEEEeC-CCCCcccccCHHHHHH
Q 014603 130 LARPGANILLPRPGFPYYEARATHSHLEVRHFDL-LPAKGWEVDLDAVEALADENTVALVIIN-PGNPCGNVYTYQHLQK 207 (422)
Q Consensus 130 l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~d~~~l~~~~~~~~~~i~i~~-p~nptG~~~~~~~l~~ 207 (422)
+...+.-++...|-+..+.......|++...+-. .+... .-.++..|+.++.+....++++ |+. ++.+++++
T Consensus 56 Ls~~~Rwlv~IaPP~~~~~~~L~~~Gl~l~rvlli~~~~~-~d~lwa~EQaLrSG~c~aVL~WLp~~-----l~~~~lRR 129 (168)
T TIGR00623 56 LGQQSRWQLWLTPQQKLSKEWVQSSGLPLTKVMQISQLSP-CNTVESMIRALRTGNYSVVIGWLTDE-----LTEEEHAK 129 (168)
T ss_pred hcccCceEEEECCCCccCHHHHHHcCCChhHEEEEecCCc-hhHHHHHHHHHHhCCCcEEEecCCcc-----CCHHHHHH
Confidence 3445566666666666778888888987644422 22111 1245678888888887788887 533 55577888
Q ss_pred HHHHHHHcCcEEE
Q 014603 208 IAETAKKLGIMVI 220 (422)
Q Consensus 208 i~~~~~~~~~~li 220 (422)
|--.+..-+.+.+
T Consensus 130 LqlAA~~G~al~f 142 (168)
T TIGR00623 130 LVRAAEEGNAMGF 142 (168)
T ss_pred HHHHHHhCCCeEE
Confidence 8777776655433
No 406
>TIGR00290 MJ0570_dom MJ0570-related uncharacterized domain. Proteins with this uncharacterized domain include two apparent ortholog families in the Archaea, one of which is universal among the first four completed archaeal genomes, and YLR143W, a much longer protein from Saccharomyces cerevisiae. The domain comprises the full length of the archaeal proteins and the first third of the yeast protein.
Probab=66.21 E-value=87 Score=27.16 Aligned_cols=98 Identities=16% Similarity=0.239 Sum_probs=61.5
Q ss_pred EEEecCHHHHHHHHHHHhcCCCCEEEe----cCC----Ccc-----chHHHHhhCCCeEEEeeccCCCCcccCHHHHHHh
Q 014603 113 VYLTLGCTQAIEVILTVLARPGANILL----PRP----GFP-----YYEARATHSHLEVRHFDLLPAKGWEVDLDAVEAL 179 (422)
Q Consensus 113 i~~~~g~~~a~~~~~~~l~~~gd~Vl~----~~~----~~~-----~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~ 179 (422)
+++.+||-.++.++..++.+ -+.+.+ +.. .|+ -....++..|++.+.++.... ..--.+.+.+.
T Consensus 4 ~~l~SGGKDS~~al~~a~~~-~~v~~L~t~~~~~~~s~~~H~~~~~~~~~qA~algipl~~~~~~~~--~e~~~e~l~~~ 80 (223)
T TIGR00290 4 AALISGGKDSCLALYHALKE-HEVISLVNIMPENEESYMFHGVNAHLTDLQAESIGIPLIKLYTEGT--EEDEVEELKGI 80 (223)
T ss_pred EEEecCcHHHHHHHHHHHHh-CeeEEEEEEecCCCCcccccccCHHHHHHHHHHcCCCeEEeecCCC--ccHHHHHHHHH
Confidence 56779999999988888766 442222 121 122 124567778888766553221 12234555555
Q ss_pred hcC-CceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEE
Q 014603 180 ADE-NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVI 220 (422)
Q Consensus 180 ~~~-~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li 220 (422)
+++ +...++ +|.+.+......+-++|.+.|+..+
T Consensus 81 l~~~gv~~vv-------~GdI~s~~qr~~~e~v~~~lgl~~~ 115 (223)
T TIGR00290 81 LHTLDVEAVV-------FGAIYSEYQKTRIERVCRELGLKSF 115 (223)
T ss_pred HHHcCCCEEE-------ECCcccHHHHHHHHHHHHhcCCEEe
Confidence 543 444555 8888888888888899999887754
No 407
>PF04392 ABC_sub_bind: ABC transporter substrate binding protein; InterPro: IPR007487 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energize diverse biological systems. ABC transporters are minimally constituted of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These regions can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. This family contains many hypothetical proteins and some ABC transporter substrate binding proteins.; PDB: 3LFT_A 3LKV_A.
Probab=65.71 E-value=52 Score=29.85 Aligned_cols=142 Identities=18% Similarity=0.246 Sum_probs=62.6
Q ss_pred HHHHHHHHHHhhCCCCCC------CCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEE
Q 014603 65 SVAVDAIVHSVRSARFNC------YSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANIL 138 (422)
Q Consensus 65 ~~v~~a~~~~~~~~~~~~------y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl 138 (422)
....+.+.+.+.+..... |....+..+..+.+++.+.. ..-+++++.|+..+..+ ...+... --|+
T Consensus 14 ~~~~~gf~~~L~~~g~~~~~~~~~~~~a~~d~~~~~~~~~~l~~------~~~DlIi~~gt~aa~~~-~~~~~~~-iPVV 85 (294)
T PF04392_consen 14 DDIVRGFKDGLKELGYDEKNVEIEYKNAEGDPEKLRQIARKLKA------QKPDLIIAIGTPAAQAL-AKHLKDD-IPVV 85 (294)
T ss_dssp HHHHHHHHHHHHHTT--CCCEEEEEEE-TT-HHHHHHHHHHHCC------TS-SEEEEESHHHHHHH-HHH-SS--S-EE
T ss_pred HHHHHHHHHHHHHcCCccccEEEEEecCCCCHHHHHHHHHHHhc------CCCCEEEEeCcHHHHHH-HHhcCCC-cEEE
Confidence 455666666665532222 22334555555556666632 23368888887776554 3444321 2233
Q ss_pred e---cCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHc
Q 014603 139 L---PRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKL 215 (422)
Q Consensus 139 ~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~ 215 (422)
. .+|...+.......-|..+.-+. ......-.++.+.+.+..-.++.++.+++.+++ ....+.+.+.++++
T Consensus 86 f~~V~dp~~~~l~~~~~~~~~nvTGv~--~~~~~~~~l~l~~~l~P~~k~igvl~~~~~~~~----~~~~~~~~~~a~~~ 159 (294)
T PF04392_consen 86 FCGVSDPVGAGLVDSLDRPGKNVTGVS--ERPPIEKQLELIKKLFPDAKRIGVLYDPSEPNS----VAQIEQLRKAAKKL 159 (294)
T ss_dssp EECES-TTTTTS-S-SSS--SSEEEEE--E---HHHHHHHHHHHSTT--EEEEEEETT-HHH----HHHHHHHHHHHHHT
T ss_pred EEeccChhhhhccccccCCCCCEEEEE--CCcCHHHHHHHHHHhCCCCCEEEEEecCCCccH----HHHHHHHHHHHHHc
Confidence 2 24444443322222222332222 111111223333444333344446667766533 24577888888899
Q ss_pred CcEEE
Q 014603 216 GIMVI 220 (422)
Q Consensus 216 ~~~li 220 (422)
|+-++
T Consensus 160 g~~l~ 164 (294)
T PF04392_consen 160 GIELV 164 (294)
T ss_dssp T-EEE
T ss_pred CCEEE
Confidence 98765
No 408
>cd06568 GH20_SpHex_like A subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the N-acetylhexosaminidase from Streptomyces plicatus (SpHex). SpHex catalyzes the hydrolysis of N-acetyl-beta-hexosaminides. An Asp residue within the active site plays a critical role in substrate-assisted catalysis by orienting the 2-acetamido group and stabilizing the transition state. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. Proteins belonging to this subgroup lack the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases.
Probab=61.62 E-value=20 Score=33.28 Aligned_cols=73 Identities=22% Similarity=0.321 Sum_probs=44.4
Q ss_pred HHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEE--Eccc
Q 014603 148 EARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVI--ADEV 224 (422)
Q Consensus 148 ~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li--~D~~ 224 (422)
.......+.++...-+.++.+|.+..+...++-.... ......+.|..++.+++++|++.|+++|+-|| +|.-
T Consensus 24 id~ma~~KlN~lhlHLtD~~~~rle~~~~P~lt~~ga----~~~~~~~~~~~YT~~di~elv~yA~~rgI~vIPEiD~P 98 (329)
T cd06568 24 IDLLALYKLNVLHLHLTDDQGWRIEIKSWPKLTEIGG----STEVGGGPGGYYTQEDYKDIVAYAAERHITVVPEIDMP 98 (329)
T ss_pred HHHHHHhCCcEEEEEeecCCcceeeecCccccccccc----ccccCCCCCCcCCHHHHHHHHHHHHHcCCEEEEecCCc
Confidence 3444556667666666555555554444333211111 01122455678999999999999999999888 5543
No 409
>cd02742 GH20_hexosaminidase Beta-N-acetylhexosaminidases of glycosyl hydrolase family 20 (GH20) catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. These enzymes are broadly distributed in microorganisms, plants and animals, and play roles in various key physiological and pathological processes. These processes include cell structural integrity, energy storage, cellular signaling, fertilization, pathogen defense, viral penetration, the development of carcinomas, inflammatory events and lysosomal storage disorders. The GH20 enzymes include the eukaryotic beta-N-acetylhexosaminidases A and B, the bacterial chitobiases, dispersin B, and lacto-N-biosidase. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by the solvent or the enzyme, but by the substrate itself.
Probab=61.20 E-value=21 Score=32.70 Aligned_cols=72 Identities=29% Similarity=0.462 Sum_probs=43.5
Q ss_pred HHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEE--Eccc
Q 014603 148 EARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVI--ADEV 224 (422)
Q Consensus 148 ~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li--~D~~ 224 (422)
.......+.++...-+.+..+|.+......++-..... .++ .+.+-.++++++++|++.|+++|+-|| +|.-
T Consensus 22 id~ma~~K~N~lhlHl~D~~~~~le~~~~p~l~~~g~~----~~~-~~~~~~yT~~di~elv~yA~~rgI~viPEiD~P 95 (303)
T cd02742 22 IDVLARYKINTFHWHLTDDQAWRIESKKFPELAEKGGQ----INP-RSPGGFYTYAQLKDIIEYAAARGIEVIPEIDMP 95 (303)
T ss_pred HHHHHHhCCcEEEEeeecCCCceEeeCccchhhhhccc----ccC-CCCCCeECHHHHHHHHHHHHHcCCEEEEeccch
Confidence 34444566676666665555555544443332221111 111 234568999999999999999999888 4543
No 410
>COG1066 Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=59.43 E-value=1.5e+02 Score=28.36 Aligned_cols=113 Identities=20% Similarity=0.199 Sum_probs=63.4
Q ss_pred CCCCCCCCCEEEecC-----HHHHHHHHHHHhcCCCCEEEecCCCccc--hHHHHhhCCCeEEEeeccCCCCcccCHHHH
Q 014603 104 LPYKLSPDDVYLTLG-----CTQAIEVILTVLARPGANILLPRPGFPY--YEARATHSHLEVRHFDLLPAKGWEVDLDAV 176 (422)
Q Consensus 104 ~~~~~~~~~i~~~~g-----~~~a~~~~~~~l~~~gd~Vl~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l 176 (422)
+|-++-+..+++..| =+..+..+...+.+.+ +||+.+-+-.. +...+.++|.....+.+..+ .+++.+
T Consensus 86 LGGG~V~Gs~iLIgGdPGIGKSTLLLQva~~lA~~~-~vLYVsGEES~~QiklRA~RL~~~~~~l~l~aE----t~~e~I 160 (456)
T COG1066 86 LGGGLVPGSVILIGGDPGIGKSTLLLQVAARLAKRG-KVLYVSGEESLQQIKLRADRLGLPTNNLYLLAE----TNLEDI 160 (456)
T ss_pred hcCCcccccEEEEccCCCCCHHHHHHHHHHHHHhcC-cEEEEeCCcCHHHHHHHHHHhCCCccceEEehh----cCHHHH
Confidence 343566666766544 2333444444555566 77766555443 34556667754433333332 577888
Q ss_pred HHhhcC-CceEEEEeCCC---CC-----ccc-ccCHHHHHHHHHHHHHcCcEEEE
Q 014603 177 EALADE-NTVALVIINPG---NP-----CGN-VYTYQHLQKIAETAKKLGIMVIA 221 (422)
Q Consensus 177 ~~~~~~-~~~~i~i~~p~---np-----tG~-~~~~~~l~~i~~~~~~~~~~li~ 221 (422)
.+.++. ++..+++-+.+ +| .|. ..-++--.+|.++|++.|+.+++
T Consensus 161 ~~~l~~~~p~lvVIDSIQT~~s~~~~SapGsVsQVRe~t~~L~~~AK~~~i~~fi 215 (456)
T COG1066 161 IAELEQEKPDLVVIDSIQTLYSEEITSAPGSVSQVREVAAELMRLAKTKNIAIFI 215 (456)
T ss_pred HHHHHhcCCCEEEEeccceeecccccCCCCcHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 777644 56666655442 22 243 33334457788999999976653
No 411
>COG4050 Uncharacterized protein conserved in archaea [Function unknown]
Probab=59.38 E-value=30 Score=26.09 Aligned_cols=45 Identities=11% Similarity=0.269 Sum_probs=35.4
Q ss_pred HHHHHHHHHhcCeEEecCCCCCCCCeEEEEeccChHHHHHHHHHHHHHHHHhcccC
Q 014603 367 MEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALEDGLGRMKAFYDRHAKKQ 422 (422)
Q Consensus 367 ~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~l~~~~~~l~~~~~~~~~~~ 422 (422)
.++..++.+++||.+ +++-+..++|+-..+++.|..+++.+..|+
T Consensus 107 NEl~~ylvR~k~iPi-----------LelkYP~s~Eea~~~VnkI~~FL~sLe~~n 151 (152)
T COG4050 107 NELCVYLVRRKGIPI-----------LELKYPRSEEEAIDFVNKIANFLKSLEAQN 151 (152)
T ss_pred chHHHHHhhhcCCce-----------EEEeCCCcHHHHHHHHHHHHHHHHhhhhhc
Confidence 456666677777665 577788889999999999999999887653
No 412
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=57.50 E-value=14 Score=37.29 Aligned_cols=40 Identities=25% Similarity=0.386 Sum_probs=31.8
Q ss_pred eCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCC
Q 014603 190 INPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGN 232 (422)
Q Consensus 190 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~ 232 (422)
-.|++..|.. ++++++++.|++.|+-||+|=++..+.-++
T Consensus 204 yAp~sryGtP---edfk~fVD~aH~~GIgViLD~V~~HF~~d~ 243 (628)
T COG0296 204 YAPTSRYGTP---EDFKALVDAAHQAGIGVILDWVPNHFPPDG 243 (628)
T ss_pred ccccccCCCH---HHHHHHHHHHHHcCCEEEEEecCCcCCCCc
Confidence 3444445544 999999999999999999999998866544
No 413
>PF01902 ATP_bind_4: ATP-binding region; InterPro: IPR002761 This domain is about 200 amino acids long with a strongly conserved motif SGGKD at the N-terminal. The structure of Q8U2K6 from SWISSPROT from Pyrococcus furiosus has been resolved to 2.7A and is suggested to be a putative N-type pytophosphatase. In some members of the family e.g. Q12429 from SWISSPROT, this domain is associated with IPR006175 from INTERPRO, another domain of unknown function. Proteins with this uncharacterised domain include two apparent ortholog families in the archaea, one of which is universal among the first four completed archaeal genomes. The domain comprises the full length of the archaeal proteins and the first third of fungal proteins.; PDB: 3RK0_A 3RK1_A 3RJZ_A 2D13_D.
Probab=55.76 E-value=94 Score=26.87 Aligned_cols=98 Identities=17% Similarity=0.201 Sum_probs=53.8
Q ss_pred EEEecCHHHHHHHHHHHhcCCCCEEE-e---c-CC---Cccc-----hHHHHhhCCCeEEEeeccCCCCcccCHHHHHHh
Q 014603 113 VYLTLGCTQAIEVILTVLARPGANIL-L---P-RP---GFPY-----YEARATHSHLEVRHFDLLPAKGWEVDLDAVEAL 179 (422)
Q Consensus 113 i~~~~g~~~a~~~~~~~l~~~gd~Vl-~---~-~~---~~~~-----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~ 179 (422)
+++-+||-.+..++.+++.+ -+.+. + + .. .|++ ....++..|++.+.++..... .-..+++.+.
T Consensus 4 v~l~SGGKDS~lAl~~a~~~-~~v~~L~t~~~~~~~s~~~H~~~~~~~~~qA~algipl~~~~~~g~~--~~~~~~l~~~ 80 (218)
T PF01902_consen 4 VALWSGGKDSCLALYRALRQ-HEVVCLLTMVPEEEDSYMFHGVNIELIEAQAEALGIPLIEIPTSGDE--EDYVEDLKEA 80 (218)
T ss_dssp EEE--SSHHHHHHHHHHHHT--EEEEEEEEEESTTT-SSS-STTGTCHHHHHHHHT--EEEEEE---C--CCHHHHHHHH
T ss_pred EEEEcCcHHHHHHHHHHHHh-CCccEEEEeccCCCCcccccccCHHHHHHHHHHCCCCEEEEEccCcc--chhhHHHHHH
Confidence 56778998888888887765 33211 1 1 11 1222 356777889998887764221 1234666666
Q ss_pred hcC-CceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEE
Q 014603 180 ADE-NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVI 220 (422)
Q Consensus 180 ~~~-~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li 220 (422)
+++ +..+++ +|.+.+......+-++|.+.|+-.+
T Consensus 81 l~~~~v~~vv-------~GdI~~~~~r~~~e~vc~~lGl~~~ 115 (218)
T PF01902_consen 81 LKELKVEAVV-------FGDIDSEYQRNWVERVCERLGLEAV 115 (218)
T ss_dssp HCTC--SEEE---------TTS-HHHHHHHHHHHHHCT-EEE
T ss_pred HHHcCCCEEE-------ECcCCcHHHHHHHHHHHHHcCCEEE
Confidence 654 334444 7888887778888889999888765
No 414
>cd06562 GH20_HexA_HexB-like Beta-N-acetylhexosaminidases catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. The hexA and hexB genes encode the alpha- and beta-subunits of the two major beta-N-acetylhexosaminidase isoenzymes, N-acetyl-beta-D-hexosaminidase A (HexA) and beta-N-acetylhexosaminidase B (HexB). Both the alpha and the beta catalytic subunits have a TIM-barrel fold and belong to the glycosyl hydrolase family 20 (GH20). The HexA enzyme is a heterodimer containing one alpha and one beta subunit while the HexB enzyme is a homodimer containing two beta-subunits. Hexosaminidase mutations cause an inability to properly hydrolyze certain sphingolipids which accumulate in lysosomes within the brain, resulting in the lipid storage disorders Tay-Sachs and Sandhoff. Mutations in the alpha subunit cause in a deficiency in the HexA enzyme and result in
Probab=54.97 E-value=26 Score=32.85 Aligned_cols=67 Identities=22% Similarity=0.347 Sum_probs=42.3
Q ss_pred HHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEE--Eccc
Q 014603 149 ARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVI--ADEV 224 (422)
Q Consensus 149 ~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li--~D~~ 224 (422)
......+.+....-+.++.+|.+....+.++...+ ....+..++.+++++|++.|+++|+-|| +|.-
T Consensus 25 d~ma~~KlN~lh~HltDd~~~rle~~~~P~Lt~~g---------a~~~~~~YT~~di~eiv~yA~~rgI~vIPEID~P 93 (348)
T cd06562 25 DAMAYNKLNVLHWHITDSQSFPLESPSYPELSKKG---------AYSPSEVYTPEDVKEIVEYARLRGIRVIPEIDTP 93 (348)
T ss_pred HHHHHhCCcEEEEeEEcCCCceEeeCCCchhhhcc---------CcCCCceECHHHHHHHHHHHHHcCCEEEEeccCc
Confidence 34445566666666655555555544433322111 1134667899999999999999999888 5544
No 415
>cd06570 GH20_chitobiase-like_1 A functionally uncharacterized subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the chitobiase of Serratia marcescens, a beta-N-1,4-acetylhexosaminidase that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This subgroup lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=54.33 E-value=29 Score=31.91 Aligned_cols=65 Identities=22% Similarity=0.369 Sum_probs=39.2
Q ss_pred HHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEE--Eccc
Q 014603 149 ARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVI--ADEV 224 (422)
Q Consensus 149 ~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li--~D~~ 224 (422)
......+.++-..-+.++.+|.+....+.++.... ..|..++.+++++|++.|+++|+-|| +|..
T Consensus 25 d~ma~~KlN~lh~HltDd~~~rle~~~~P~lt~~g-----------~~~~~yT~~di~elv~yA~~rgI~vIPEId~P 91 (311)
T cd06570 25 DAMASVKLNVFHWHLTDDQGFRIESKKYPKLQQKA-----------SDGLYYTQEQIREVVAYARDRGIRVVPEIDVP 91 (311)
T ss_pred HHHHHhCCeEEEEEEecCCCceeecCCCccccccC-----------CCCCccCHHHHHHHHHHHHHcCCEEEEeecCc
Confidence 34445566666665554444444433322211111 13556999999999999999999888 5543
No 416
>TIGR00289 conserved hypothetical protein TIGR00289. Homologous proteins related to MJ0570 of Methanococcus jannaschii include both the apparent orthologs found by this model above the trusted cutoff, the much longer protein YLR143W from Saccharomyces cerevisiae, and second homologous proteins from Archaeoglobus fulgidus and Pyrococcus horikoshii that appear to represent a second orthologous group.
Probab=53.95 E-value=1.5e+02 Score=25.75 Aligned_cols=98 Identities=17% Similarity=0.177 Sum_probs=60.5
Q ss_pred EEEecCHHHHHHHHHHHhcCCCCEEEe--cCC------Ccc-----chHHHHhhCCCeEEEeeccCCCCcccCHHHHHHh
Q 014603 113 VYLTLGCTQAIEVILTVLARPGANILL--PRP------GFP-----YYEARATHSHLEVRHFDLLPAKGWEVDLDAVEAL 179 (422)
Q Consensus 113 i~~~~g~~~a~~~~~~~l~~~gd~Vl~--~~~------~~~-----~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~ 179 (422)
++..+||-.+..++..++.+ .+.+.+ ..| +++ -....++..|++.+.+.... .+.-..+.+.+.
T Consensus 4 ~vl~SGGKDS~lAl~~~~~~-~~V~~L~~~~~~~~~s~~~h~~~~~~~~~qA~algiPl~~~~~~~--~~e~~~~~l~~~ 80 (222)
T TIGR00289 4 AVLYSGGKDSILALYKALEE-HEVISLVGVFSENEESYMFHSPNLHLTDLVAEAVGIPLIKLYTSG--EEEKEVEDLAGQ 80 (222)
T ss_pred EEEecCcHHHHHHHHHHHHc-CeeEEEEEEcCCCCCccccccCCHHHHHHHHHHcCCCeEEEEcCC--chhHHHHHHHHH
Confidence 45778888888888877655 443222 111 222 22466777888876665432 112233444444
Q ss_pred hcC-CceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEE
Q 014603 180 ADE-NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVI 220 (422)
Q Consensus 180 ~~~-~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li 220 (422)
+.+ +...++ +|.+.+......+-++|.+.|+-.+
T Consensus 81 l~~~gv~~vv-------~GdI~s~~qr~~~e~vc~~~gl~~~ 115 (222)
T TIGR00289 81 LGELDVEALC-------IGAIESNYQKSRIDKVCRELGLKSI 115 (222)
T ss_pred HHHcCCCEEE-------ECccccHHHHHHHHHHHHHcCCEEe
Confidence 433 445555 8888888888999999999887754
No 417
>PRK13937 phosphoheptose isomerase; Provisional
Probab=53.49 E-value=1.3e+02 Score=25.11 Aligned_cols=35 Identities=29% Similarity=0.409 Sum_probs=25.1
Q ss_pred hhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEE
Q 014603 179 LADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVI 220 (422)
Q Consensus 179 ~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li 220 (422)
.++++..+++++.. |.. .++.++++.|+++|+.+|
T Consensus 103 ~~~~~Dl~i~iS~s----G~t---~~~~~~~~~ak~~g~~~I 137 (188)
T PRK13937 103 LGRPGDVLIGISTS----GNS---PNVLAALEKARELGMKTI 137 (188)
T ss_pred hCCCCCEEEEEeCC----CCc---HHHHHHHHHHHHCCCeEE
Confidence 34556666666663 333 678999999999998776
No 418
>PRK05678 succinyl-CoA synthetase subunit alpha; Validated
Probab=53.40 E-value=60 Score=29.48 Aligned_cols=48 Identities=17% Similarity=0.185 Sum_probs=33.5
Q ss_pred CHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccc
Q 014603 172 DLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVY 225 (422)
Q Consensus 172 d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~ 225 (422)
-++.+++....+.+.+++.....+ .++-++|.++++++|+.++==.+.
T Consensus 78 v~~~l~e~~~~gvk~avI~s~Gf~------~~~~~~l~~~a~~~girvlGPNc~ 125 (291)
T PRK05678 78 AADAILEAIDAGIDLIVCITEGIP------VLDMLEVKAYLERKKTRLIGPNCP 125 (291)
T ss_pred HHHHHHHHHHCCCCEEEEECCCCC------HHHHHHHHHHHHHcCCEEECCCCC
Confidence 466777777778877766554332 355568999999999998844433
No 419
>PLN00191 enolase
Probab=50.74 E-value=74 Score=31.03 Aligned_cols=99 Identities=10% Similarity=0.071 Sum_probs=59.2
Q ss_pred CHHHHHHHHHHHhcCCCCEEEecCCCccc-hHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCc
Q 014603 118 GCTQAIEVILTVLARPGANILLPRPGFPY-YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPC 196 (422)
Q Consensus 118 g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~npt 196 (422)
++.+++... +.+..+-+-+.+++|.... +....+.... ..+|+-..+.+..+++.+++.+..+..-++..-++.-.
T Consensus 296 s~~e~i~~~-~~L~~~y~I~~IEDPl~~~D~eg~~~Lt~~--~~ipIvgDE~~vtn~~~l~~~I~~~aad~i~iKl~qiG 372 (457)
T PLN00191 296 SGDELIDLY-KEFVSDYPIVSIEDPFDQDDWEHWAKLTSL--EDVQIVGDDLLVTNPKRVAKAIQEKACNALLLKVNQIG 372 (457)
T ss_pred CHHHHHHHH-HHHhhcCCcEEEECCCCcccHHHHHHHHcc--CCCcEEccCcccCCHHHHHHHHHhCCCCEEEecccccC
Confidence 455555553 4444545678899998643 3333332221 22333222333356888888887665555566666544
Q ss_pred ccccCHHHHHHHHHHHHHcCcEEEEcc
Q 014603 197 GNVYTYQHLQKIAETAKKLGIMVIADE 223 (422)
Q Consensus 197 G~~~~~~~l~~i~~~~~~~~~~li~D~ 223 (422)
|.. +..+++++|+++|+.+++-.
T Consensus 373 GIT----ea~~~a~lA~~~G~~~~ish 395 (457)
T PLN00191 373 TVT----ESIEAVKMSKAAGWGVMTSH 395 (457)
T ss_pred CHH----HHHHHHHHHHHCCCEEEeCC
Confidence 444 77889999999999988643
No 420
>PRK11070 ssDNA exonuclease RecJ; Provisional
Probab=50.44 E-value=1.7e+02 Score=29.66 Aligned_cols=99 Identities=15% Similarity=0.153 Sum_probs=55.6
Q ss_pred cCHHHHHHHHHHHhcCCCCEEEe-cCCCccch------HHHHhhCCC-eE-EEeeccCCCCcccCHHHHHHhhcCCceEE
Q 014603 117 LGCTQAIEVILTVLARPGANILL-PRPGFPYY------EARATHSHL-EV-RHFDLLPAKGWEVDLDAVEALADENTVAL 187 (422)
Q Consensus 117 ~g~~~a~~~~~~~l~~~gd~Vl~-~~~~~~~~------~~~~~~~g~-~~-~~~~~~~~~~~~~d~~~l~~~~~~~~~~i 187 (422)
.+...|.+.+..++.+. .+|++ -+..-.+. ....+..|. .+ .++|..-.++|+++.+.+++....+..++
T Consensus 53 ~~m~~a~~ri~~ai~~~-e~I~I~gDyD~DGitstail~~~L~~~g~~~~~~~IP~R~~eGYGl~~~~i~~~~~~~~~Li 131 (575)
T PRK11070 53 SGIEKAVELLYNALREG-TRIIVVGDFDADGATSTALSVLALRSLGCSNVDYLVPNRFEDGYGLSPEVVDQAHARGAQLI 131 (575)
T ss_pred hCHHHHHHHHHHHHHCC-CEEEEEEecCccHHHHHHHHHHHHHHcCCCceEEEeCCCCcCCCCCCHHHHHHHHhcCCCEE
Confidence 56666666666665433 44443 33333332 233445565 33 34554446789999999998776666776
Q ss_pred EEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccc
Q 014603 188 VIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVY 225 (422)
Q Consensus 188 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~ 225 (422)
+.+... ++.. ++ ++.|++.|+-+|+=|-|
T Consensus 132 ItvD~G--i~~~---e~----i~~a~~~gidvIVtDHH 160 (575)
T PRK11070 132 VTVDNG--ISSH---AG----VAHAHALGIPVLVTDHH 160 (575)
T ss_pred EEEcCC--cCCH---HH----HHHHHHCCCCEEEECCC
Confidence 665532 2222 23 34677888866654333
No 421
>COG0352 ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
Probab=50.23 E-value=81 Score=27.08 Aligned_cols=52 Identities=19% Similarity=0.216 Sum_probs=37.3
Q ss_pred HHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEccccc
Q 014603 173 LDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYD 226 (422)
Q Consensus 173 ~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~ 226 (422)
.+.++++++.+..++-+=.-+..+-.. .+..+++.++|++|++.+|+++-..
T Consensus 24 ~~~ve~al~~Gv~~vQlR~K~~~~~~~--~~~a~~~~~lc~~~~v~liINd~~d 75 (211)
T COG0352 24 LEWVEAALKGGVTAVQLREKDLSDEEY--LALAEKLRALCQKYGVPLIINDRVD 75 (211)
T ss_pred HHHHHHHHhCCCeEEEEecCCCChHHH--HHHHHHHHHHHHHhCCeEEecCcHH
Confidence 678888888777766555544433332 3667899999999999888877543
No 422
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=50.23 E-value=1.6e+02 Score=25.09 Aligned_cols=95 Identities=17% Similarity=0.193 Sum_probs=53.8
Q ss_pred CCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEE
Q 014603 109 SPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALV 188 (422)
Q Consensus 109 ~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~ 188 (422)
....+++..||..|...+ +.|++.|-.|.+.+|....-.......+ ++..+.- . +..+.+ . ...++
T Consensus 8 ~gk~vlVvGgG~va~rk~-~~Ll~~ga~VtVvsp~~~~~l~~l~~~~-~i~~~~~----~--~~~~dl----~--~~~lV 73 (205)
T TIGR01470 8 EGRAVLVVGGGDVALRKA-RLLLKAGAQLRVIAEELESELTLLAEQG-GITWLAR----C--FDADIL----E--GAFLV 73 (205)
T ss_pred CCCeEEEECcCHHHHHHH-HHHHHCCCEEEEEcCCCCHHHHHHHHcC-CEEEEeC----C--CCHHHh----C--CcEEE
Confidence 445788888888887765 4555677777777776643222222233 4444332 1 222222 1 23345
Q ss_pred EeCCCCCcccccCHHHHHHHHHHHHHcCcEEE-Eccc
Q 014603 189 IINPGNPCGNVYTYQHLQKIAETAKKLGIMVI-ADEV 224 (422)
Q Consensus 189 i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li-~D~~ 224 (422)
+..++++ +.=.++.+.|++.++++- +|+.
T Consensus 74 i~at~d~-------~ln~~i~~~a~~~~ilvn~~d~~ 103 (205)
T TIGR01470 74 IAATDDE-------ELNRRVAHAARARGVPVNVVDDP 103 (205)
T ss_pred EECCCCH-------HHHHHHHHHHHHcCCEEEECCCc
Confidence 5555543 234678889999998873 5554
No 423
>cd00532 MGS-like MGS-like domain. This domain composes the whole protein of methylglyoxal synthetase, which catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The family also includes the C-terminal domain in carbamoyl phosphate synthetase (CPS) where it catalyzes the last phosphorylation of a coaboxyphosphate intermediate to form the product carbamoyl phosphate and may also play a regulatory role. This family also includes inosine monophosphate cyclohydrolase. The known structures in this family show a common phosphate binding site.
Probab=49.72 E-value=1.1e+02 Score=23.03 Aligned_cols=92 Identities=16% Similarity=0.121 Sum_probs=48.4
Q ss_pred HHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC-CceEEEEeCCCCCcccccCH
Q 014603 124 EVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE-NTVALVIINPGNPCGNVYTY 202 (422)
Q Consensus 124 ~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~i~~p~nptG~~~~~ 202 (422)
..++..+.+.|=+++.+. +.....+..|+++..+.-.++++ + .++.+.+.. +..-+++..|. +.-.....
T Consensus 15 ~~~a~~l~~~G~~i~AT~----gTa~~L~~~Gi~~~~v~~~~~~g---~-~~i~~~i~~~g~idlVIn~~~-~~~~~~~~ 85 (112)
T cd00532 15 VDLAPKLSSDGFPLFATG----GTSRVLADAGIPVRAVSKRHEDG---E-PTVDAAIAEKGKFDVVINLRD-PRRDRCTD 85 (112)
T ss_pred HHHHHHHHHCCCEEEECc----HHHHHHHHcCCceEEEEecCCCC---C-cHHHHHHhCCCCEEEEEEcCC-CCcccccC
Confidence 333444444455554443 22333444666665543222211 2 345555655 55556666654 11101112
Q ss_pred HHHHHHHHHHHHcCcEEEEccc
Q 014603 203 QHLQKIAETAKKLGIMVIADEV 224 (422)
Q Consensus 203 ~~l~~i~~~~~~~~~~li~D~~ 224 (422)
.+-..|.+.|.++++.++.+-.
T Consensus 86 ~dg~~iRR~A~~~~Ip~~T~~~ 107 (112)
T cd00532 86 EDGTALLRLARLYKIPVTTPNA 107 (112)
T ss_pred CChHHHHHHHHHcCCCEEECHH
Confidence 4577899999999999997643
No 424
>PRK04296 thymidine kinase; Provisional
Probab=49.26 E-value=1.1e+02 Score=25.63 Aligned_cols=96 Identities=16% Similarity=0.163 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHhcCCCCEEEecCCCcc---chHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhc---CCceEEEEeCC
Q 014603 119 CTQAIEVILTVLARPGANILLPRPGFP---YYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALAD---ENTVALVIINP 192 (422)
Q Consensus 119 ~~~a~~~~~~~l~~~gd~Vl~~~~~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~---~~~~~i~i~~p 192 (422)
+|.++..+.+.. ..|.+|++..|.+. +....+...|..+..+.. ...+++.+.+. .+..++++-..
T Consensus 16 TT~~l~~~~~~~-~~g~~v~i~k~~~d~~~~~~~i~~~lg~~~~~~~~-------~~~~~~~~~~~~~~~~~dvviIDEa 87 (190)
T PRK04296 16 STELLQRAYNYE-ERGMKVLVFKPAIDDRYGEGKVVSRIGLSREAIPV-------SSDTDIFELIEEEGEKIDCVLIDEA 87 (190)
T ss_pred HHHHHHHHHHHH-HcCCeEEEEeccccccccCCcEecCCCCcccceEe-------CChHHHHHHHHhhCCCCCEEEEEcc
Confidence 356666655544 45788887766322 223334444543322211 12233333222 24556666665
Q ss_pred CCCcccccCHHHHHHHHHHHHHcCcEEEEcccccc
Q 014603 193 GNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDH 227 (422)
Q Consensus 193 ~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~ 227 (422)
+. ++.+++.++.+.++..|+.+|+=.-...
T Consensus 88 q~-----l~~~~v~~l~~~l~~~g~~vi~tgl~~~ 117 (190)
T PRK04296 88 QF-----LDKEQVVQLAEVLDDLGIPVICYGLDTD 117 (190)
T ss_pred cc-----CCHHHHHHHHHHHHHcCCeEEEEecCcc
Confidence 43 5667788899988888988886544433
No 425
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=49.03 E-value=1.3e+02 Score=24.61 Aligned_cols=77 Identities=22% Similarity=0.167 Sum_probs=41.5
Q ss_pred HHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHH
Q 014603 126 ILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHL 205 (422)
Q Consensus 126 ~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l 205 (422)
+++.+++.|-+|....-.-..... .. ++..+..+. .|++.+.+.+. +..+++.+.+.++. ..+..
T Consensus 14 l~~~L~~~~~~V~~~~R~~~~~~~---~~--~~~~~~~d~-----~d~~~~~~al~-~~d~vi~~~~~~~~----~~~~~ 78 (183)
T PF13460_consen 14 LAKQLLRRGHEVTALVRSPSKAED---SP--GVEIIQGDL-----FDPDSVKAALK-GADAVIHAAGPPPK----DVDAA 78 (183)
T ss_dssp HHHHHHHTTSEEEEEESSGGGHHH---CT--TEEEEESCT-----TCHHHHHHHHT-TSSEEEECCHSTTT----HHHHH
T ss_pred HHHHHHHCCCEEEEEecCchhccc---cc--ccccceeee-----hhhhhhhhhhh-hcchhhhhhhhhcc----ccccc
Confidence 445555566655544322222222 23 344444322 47788888887 45555555443333 14667
Q ss_pred HHHHHHHHHcCc
Q 014603 206 QKIAETAKKLGI 217 (422)
Q Consensus 206 ~~i~~~~~~~~~ 217 (422)
+.+.+.|++.|+
T Consensus 79 ~~~~~a~~~~~~ 90 (183)
T PF13460_consen 79 KNIIEAAKKAGV 90 (183)
T ss_dssp HHHHHHHHHTTS
T ss_pred cccccccccccc
Confidence 888888887654
No 426
>PF02603 Hpr_kinase_N: HPr Serine kinase N terminus; InterPro: IPR011126 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents the N-terminal region of Hpr Serine/threonine kinase PtsK. This kinase is the sensor in a multicomponent phosphorelay system in control of carbon catabolic repression in bacteria []. This kinase in unusual in that it recognises the tertiary structure of its target and is a member of a novel family unrelated to any previously described protein phosphorylating enzymes []. X-ray analysis of the full-length crystalline enzyme from Staphylococcus xylosus at a resolution of 1.95 A shows the enzyme to consist of two clearly separated domains that are assembled in a hexameric structure resembling a three-bladed propeller. The blades are formed by two N-terminal domains each, and the compact central hub assembles the C-terminal kinase domains []. ; GO: 0000155 two-component sensor activity, 0004672 protein kinase activity, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay), 0006109 regulation of carbohydrate metabolic process; PDB: 1KNX_B 1KO7_A.
Probab=48.64 E-value=29 Score=27.00 Aligned_cols=39 Identities=21% Similarity=0.311 Sum_probs=24.3
Q ss_pred HHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEE
Q 014603 174 DAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIA 221 (422)
Q Consensus 174 ~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 221 (422)
+.+++.++.++.+++++....| -+.+.++|+++++.|+.
T Consensus 72 ~~l~~l~~~~~P~iIvt~~~~~---------p~~l~e~a~~~~ipll~ 110 (127)
T PF02603_consen 72 ERLEKLFSYNPPCIIVTRGLEP---------PPELIELAEKYNIPLLR 110 (127)
T ss_dssp CHHHHHCTTT-S-EEEETTT------------HHHHHHHHHCT--EEE
T ss_pred HHHHHHhCCCCCEEEEECcCCC---------CHHHHHHHHHhCCcEEE
Confidence 3466677778999999876643 36677788899998874
No 427
>TIGR02717 AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP forming), alpha domain. Although technically reversible, it is believed that this group of ADP-dependent acetyl-CoA synthetases (ACS) act in the direction of acetate and ATP production in the organisms in which it has been characterized. In most species this protein exists as a fused alpha-beta domain polypeptide. In Pyrococcus and related species, however the domains exist as separate polypeptides. This model represents the alpha (N-terminal) domain. In Pyrococcus and related species there appears to have been the development of a paralogous family such that four other proteins are close relatives. In reference, one of these (along with its beta-domain partner) was characterized as ACS-II showing specificity for phenylacetyl-CoA. This model has been constructed to exclude these non-ACS-I paralogs. This may result in new, authentic ACS-I sequences falling below the trusted cutoff.
Probab=48.03 E-value=1.4e+02 Score=29.12 Aligned_cols=58 Identities=19% Similarity=0.290 Sum_probs=37.1
Q ss_pred CHHHHHHhhcCCceEEEEeCCC-CCcccccCHHHHHHHHHHHHHcCcEEEEccccccccc
Q 014603 172 DLDAVEALADENTVALVIINPG-NPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAF 230 (422)
Q Consensus 172 d~~~l~~~~~~~~~~i~i~~p~-nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~ 230 (422)
-++.+++....+.+.+++.... ..+|.- -.+.-+++.++|+++|+.++--.+.+.+..
T Consensus 77 ~~~~l~e~~~~gv~~~vi~s~gf~e~g~~-g~~~~~~l~~~a~~~girvlGPnc~G~~~~ 135 (447)
T TIGR02717 77 VPQVVEECGEKGVKGAVVITAGFKEVGEE-GAELEQELVEIARKYGMRLLGPNCLGIINT 135 (447)
T ss_pred HHHHHHHHHhcCCCEEEEECCCccccCcc-hHHHHHHHHHHHHHcCCEEEecCeeeEecC
Confidence 4566677777777777655432 233321 012237899999999999998888765443
No 428
>cd01422 MGS Methylglyoxal synthase catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The first part of the catalytic mechanism is believed to be similar to TIM (triosephosphate isomerase) in that both enzymes utilize DHAP to form an ene-diolate phosphate intermediate. In MGS, the second catalytic step is characterized by the elimination of phosphate and collapse of the enediolate to form methylglyoxal instead of reprotonation to form the isomer glyceraldehyde 3-phosphate, as in TIM. This is the first reaction in the methylglyoxal bypass of the Embden-Myerhoff glycolytic pathway and is believed to provide physiological benefits under non-ideal growth conditions in bacteria.
Probab=47.71 E-value=1.2e+02 Score=23.00 Aligned_cols=63 Identities=19% Similarity=0.227 Sum_probs=37.1
Q ss_pred CCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEE
Q 014603 154 SHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIA 221 (422)
Q Consensus 154 ~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 221 (422)
.|+++..+++.+.++ + .++.+.+..+...+++..|+ |.|......+-..|.+.|-++++.++.
T Consensus 44 ~Gi~v~~vk~~~~~g---~-~~i~~~i~~g~i~~VInt~~-~~~~~~~~~dg~~iRr~a~~~~Ip~~T 106 (115)
T cd01422 44 TGLTVNRMKSGPLGG---D-QQIGALIAEGEIDAVIFFRD-PLTAQPHEPDVKALLRLCDVYNIPLAT 106 (115)
T ss_pred hCCcEEEEecCCCCc---h-hHHHHHHHcCceeEEEEcCC-CCCCCcccccHHHHHHHHHHcCCCEEE
Confidence 466666554322222 3 44566666555555555553 212222135788999999999998874
No 429
>cd01018 ZntC Metal binding protein ZntC. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and bind their specific ligands in the cleft between these domains. In addition, many of these proteins possess a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=46.14 E-value=2.2e+02 Score=25.40 Aligned_cols=74 Identities=19% Similarity=0.263 Sum_probs=41.4
Q ss_pred CCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHH---hhcCCceEEEEeCCCCCcccccCHHHHHHHH
Q 014603 133 PGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEA---LADENTVALVIINPGNPCGNVYTYQHLQKIA 209 (422)
Q Consensus 133 ~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~---~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~ 209 (422)
++..+++..+.| .-.++.+|++...+. . .+..+.+.+|.+ .++++...+++++++.+... ++
T Consensus 169 ~~~~~v~~H~af---~Y~~~~ygl~~~~~~-~--~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~~~------~~--- 233 (266)
T cd01018 169 KQRAFMVYHPAW---GYFARDYGLTQIPIE-E--EGKEPSPADLKRLIDLAKEKGVRVVFVQPQFSTKS------AE--- 233 (266)
T ss_pred CCCeEEEECchh---HHHHHHcCCEEEecC-C--CCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCcHH------HH---
Confidence 345677766555 455678888876542 1 233455555544 45554444566777654422 23
Q ss_pred HHHHHcCcEEEE
Q 014603 210 ETAKKLGIMVIA 221 (422)
Q Consensus 210 ~~~~~~~~~li~ 221 (422)
.++++.|+.++.
T Consensus 234 ~la~~~g~~v~~ 245 (266)
T cd01018 234 AIAREIGAKVVT 245 (266)
T ss_pred HHHHHcCCeEEE
Confidence 455677876653
No 430
>PRK05234 mgsA methylglyoxal synthase; Validated
Probab=46.12 E-value=1.5e+02 Score=23.58 Aligned_cols=48 Identities=15% Similarity=0.167 Sum_probs=31.1
Q ss_pred HHHHHhhcCCceEEEEeCC--CCCcccccCHHHHHHHHHHHHHcCcEEEEccc
Q 014603 174 DAVEALADENTVALVIINP--GNPCGNVYTYQHLQKIAETAKKLGIMVIADEV 224 (422)
Q Consensus 174 ~~l~~~~~~~~~~i~i~~p--~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~ 224 (422)
.++.+.+..+...+++..| ..+.+. ..+...|.+.|-++|+.++..-.
T Consensus 65 ~~i~~~I~~g~i~lVInt~dp~~~~~~---~~D~~~IRR~Av~~~IP~~T~l~ 114 (142)
T PRK05234 65 QQIGALIAEGKIDMLIFFRDPLTAQPH---DPDVKALLRLADVWNIPVATNRA 114 (142)
T ss_pred hhHHHHHHcCceeEEEEecCCCCCCcc---cchHHHHHHHHHHcCCCEEcCHH
Confidence 4455666555555555554 433332 25778999999999999986544
No 431
>COG1184 GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis]
Probab=45.86 E-value=2.4e+02 Score=25.76 Aligned_cols=104 Identities=20% Similarity=0.191 Sum_probs=55.5
Q ss_pred CCCCCEEEecCHHHHHHHHHHHhcCCCC--EEEec--CCCccch--HHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhc
Q 014603 108 LSPDDVYLTLGCTQAIEVILTVLARPGA--NILLP--RPGFPYY--EARATHSHLEVRHFDLLPAKGWEVDLDAVEALAD 181 (422)
Q Consensus 108 ~~~~~i~~~~g~~~a~~~~~~~l~~~gd--~Vl~~--~~~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~ 181 (422)
+...++++|.+-+.+...++....+.|. +|++. .|.+.+. ....+..|+++..++ | ...-..++
T Consensus 117 i~dg~~IlTh~~S~~v~~~l~~A~~~~k~~~V~VtESRP~~eG~~~ak~L~~~gI~~~~I~---------D-sa~~~~~~ 186 (301)
T COG1184 117 IHDGDVILTHSFSKTVLEVLKTAADRGKRFKVIVTESRPRGEGRIMAKELRQSGIPVTVIV---------D-SAVGAFMS 186 (301)
T ss_pred ccCCCEEEEecCcHHHHHHHHHhhhcCCceEEEEEcCCCcchHHHHHHHHHHcCCceEEEe---------c-hHHHHHHH
Confidence 3556889998887777777777766665 55554 5777654 334445565555443 2 12222233
Q ss_pred CCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEE
Q 014603 182 ENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIA 221 (422)
Q Consensus 182 ~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 221 (422)
+-.++++=.+.--..|.++++-=--.|+..|++.+.++++
T Consensus 187 ~vd~VivGad~I~~nG~lvnkiGT~~lA~~A~e~~~Pf~v 226 (301)
T COG1184 187 RVDKVLVGADAILANGALVNKIGTSPLALAARELRVPFYV 226 (301)
T ss_pred hCCEEEECccceecCCcEEeccchHHHHHHHHHhCCCEEE
Confidence 2223322222222233333333334566777888887663
No 432
>smart00642 Aamy Alpha-amylase domain.
Probab=45.66 E-value=30 Score=28.43 Aligned_cols=25 Identities=32% Similarity=0.567 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHcCcEEEEcccccc
Q 014603 203 QHLQKIAETAKKLGIMVIADEVYDH 227 (422)
Q Consensus 203 ~~l~~i~~~~~~~~~~li~D~~~~~ 227 (422)
++++++++.|+++|+.||.|-+...
T Consensus 70 ~d~~~lv~~~h~~Gi~vilD~V~NH 94 (166)
T smart00642 70 EDFKELVDAAHARGIKVILDVVINH 94 (166)
T ss_pred HHHHHHHHHHHHCCCEEEEEECCCC
Confidence 8999999999999999999998765
No 433
>KOG4589 consensus Cell division protein FtsJ [Cell cycle control, cell division, chromosome partitioning]
Probab=45.54 E-value=1.9e+02 Score=24.44 Aligned_cols=35 Identities=14% Similarity=0.124 Sum_probs=22.6
Q ss_pred HhhcCCceEEEEeCC-CCCcccccCHHHHHHHHHHHHH
Q 014603 178 ALADENTVALVIINP-GNPCGNVYTYQHLQKIAETAKK 214 (422)
Q Consensus 178 ~~~~~~~~~i~i~~p-~nptG~~~~~~~l~~i~~~~~~ 214 (422)
+.+..++.=++++.- .|+||..+ -|=..+.++|..
T Consensus 130 e~lp~r~VdvVlSDMapnaTGvr~--~Dh~~~i~LC~s 165 (232)
T KOG4589|consen 130 EALPNRPVDVVLSDMAPNATGVRI--RDHYRSIELCDS 165 (232)
T ss_pred HhCCCCcccEEEeccCCCCcCcch--hhHHHHHHHHHH
Confidence 334434444566644 79999876 355677888875
No 434
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=45.39 E-value=1.5e+02 Score=26.89 Aligned_cols=98 Identities=17% Similarity=0.133 Sum_probs=49.4
Q ss_pred CCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHH---HHhhCCCeEEEeeccCCCCcccCHHHHH---Hhhc
Q 014603 108 LSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEA---RATHSHLEVRHFDLLPAKGWEVDLDAVE---ALAD 181 (422)
Q Consensus 108 ~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~---~~~~ 181 (422)
+..+-+++|.||...=..+..-+.+.|.++++-+-.-.+..+ ..+..| ++..+..+-. +.|++. +.++
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g-~~~~y~cdis-----~~eei~~~a~~Vk 109 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIG-EAKAYTCDIS-----DREEIYRLAKKVK 109 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcC-ceeEEEecCC-----CHHHHHHHHHHHH
Confidence 344556666666655555555677788766554333222222 222224 4555544332 334433 3333
Q ss_pred C--CceEEEEeCCC---CCcccccCHHHHHHHHHH
Q 014603 182 E--NTVALVIINPG---NPCGNVYTYQHLQKIAET 211 (422)
Q Consensus 182 ~--~~~~i~i~~p~---nptG~~~~~~~l~~i~~~ 211 (422)
+ +..-++++|.. .-.....+.++++++.++
T Consensus 110 ~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~v 144 (300)
T KOG1201|consen 110 KEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDV 144 (300)
T ss_pred HhcCCceEEEeccccccCCCccCCCHHHHHHHHHH
Confidence 2 44556666663 223334677778777663
No 435
>PF14258 DUF4350: Domain of unknown function (DUF4350)
Probab=44.22 E-value=97 Score=20.82 Aligned_cols=60 Identities=17% Similarity=0.223 Sum_probs=34.9
Q ss_pred hHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccC-HHHHHHHHHHHHHcCcEEEEc
Q 014603 147 YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYT-YQHLQKIAETAKKLGIMVIAD 222 (422)
Q Consensus 147 ~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~-~~~l~~i~~~~~~~~~~li~D 222 (422)
+....+..|.++..... ..+.++. ....+++.+|... ++ ++++++|.++.++-|-++|+|
T Consensus 10 ~~~~L~~~g~~v~~~~~--------~~~~l~~----~~~tll~i~~~~~----~~~~~~~~~l~~~v~~G~~lvl~a 70 (70)
T PF14258_consen 10 LYQLLEEQGVKVERWRK--------PYEALEA----DDGTLLVIGPDLR----LSEPEEAEALLEWVEAGNTLVLAA 70 (70)
T ss_pred HHHHHHHCCCeeEEecc--------cHHHhCC----CCCEEEEEeCCCC----CCchHHHHHHHHHHHcCCEEEEeC
Confidence 34455556766654321 1233322 3344556666522 33 488999999998877777765
No 436
>KOG2741 consensus Dimeric dihydrodiol dehydrogenase [Carbohydrate transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=44.09 E-value=95 Score=28.75 Aligned_cols=75 Identities=13% Similarity=0.162 Sum_probs=46.6
Q ss_pred CCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHH-hhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEE
Q 014603 141 RPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEA-LADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMV 219 (422)
Q Consensus 141 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~-~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~l 219 (422)
.-.|.+|...++.-.+++++++.... ..-++.. ++. +.|.+++.-|- .++.++.++|++.|+.+|+ .
T Consensus 58 ~k~y~syEeLakd~~vDvVyi~~~~~-----qH~evv~l~l~-~~K~VL~EKPl-----a~n~~e~~~iveaA~~rgv-~ 125 (351)
T KOG2741|consen 58 PKAYGSYEELAKDPEVDVVYISTPNP-----QHYEVVMLALN-KGKHVLCEKPL-----AMNVAEAEEIVEAAEARGV-F 125 (351)
T ss_pred CccccCHHHHhcCCCcCEEEeCCCCc-----cHHHHHHHHHH-cCCcEEecccc-----cCCHHHHHHHHHHHHHcCc-E
Confidence 34577888899888888888875322 2222222 232 23335544442 3555899999999999884 4
Q ss_pred EEcccccc
Q 014603 220 IADEVYDH 227 (422)
Q Consensus 220 i~D~~~~~ 227 (422)
+.|..+..
T Consensus 126 ~meg~~~R 133 (351)
T KOG2741|consen 126 FMEGLWWR 133 (351)
T ss_pred EEeeeeee
Confidence 55666543
No 437
>COG1435 Tdk Thymidine kinase [Nucleotide transport and metabolism]
Probab=43.96 E-value=1.1e+02 Score=25.81 Aligned_cols=93 Identities=16% Similarity=0.158 Sum_probs=48.3
Q ss_pred cCHHHHHHHHHHHhcCCCCEEEecCCCccch---HHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC-----CceEEE
Q 014603 117 LGCTQAIEVILTVLARPGANILLPRPGFPYY---EARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE-----NTVALV 188 (422)
Q Consensus 117 ~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-----~~~~i~ 188 (422)
+|=|+-+-..++.....|.+|++..|..... .....+.|.....+.+.+ + .++-+.+.. .+..++
T Consensus 15 SGKT~eLl~r~~~~~~~g~~v~vfkp~iD~R~~~~~V~Sr~G~~~~A~~i~~------~-~~i~~~i~~~~~~~~~~~v~ 87 (201)
T COG1435 15 SGKTEELLRRARRYKEAGMKVLVFKPAIDTRYGVGKVSSRIGLSSEAVVIPS------D-TDIFDEIAALHEKPPVDCVL 87 (201)
T ss_pred CcchHHHHHHHHHHHHcCCeEEEEecccccccccceeeeccCCcccceecCC------h-HHHHHHHHhcccCCCcCEEE
Confidence 4445555555555556788888888877532 222223343333333221 1 222222211 134555
Q ss_pred EeCCCCCcccccCHHHHHHHHHHHHHcCcEEEE
Q 014603 189 IINPGNPCGNVYTYQHLQKIAETAKKLGIMVIA 221 (422)
Q Consensus 189 i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 221 (422)
+-..+. ++.+.+..+.+++.+.|+.||.
T Consensus 88 IDEaQF-----~~~~~v~~l~~lad~lgi~Vi~ 115 (201)
T COG1435 88 IDEAQF-----FDEELVYVLNELADRLGIPVIC 115 (201)
T ss_pred EehhHh-----CCHHHHHHHHHHHhhcCCEEEE
Confidence 555554 5556677777777777777774
No 438
>TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit. ATP citrate lyases appear to form an outgroup.
Probab=42.92 E-value=1.1e+02 Score=27.70 Aligned_cols=48 Identities=19% Similarity=0.214 Sum_probs=32.9
Q ss_pred CHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccc
Q 014603 172 DLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVY 225 (422)
Q Consensus 172 d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~ 225 (422)
-++.+++....+.+.+++..... +..+-++|.++|+++|+.++==.+.
T Consensus 76 v~~~l~e~~~~Gvk~avIis~Gf------~e~~~~~l~~~a~~~girilGPNc~ 123 (286)
T TIGR01019 76 AADAIFEAIDAGIELIVCITEGI------PVHDMLKVKRYMEESGTRLIGPNCP 123 (286)
T ss_pred HHHHHHHHHHCCCCEEEEECCCC------CHHHHHHHHHHHHHcCCEEECCCCc
Confidence 45677777777887776655432 2234578999999999998843333
No 439
>PRK00077 eno enolase; Provisional
Probab=42.51 E-value=86 Score=30.31 Aligned_cols=85 Identities=8% Similarity=-0.003 Sum_probs=51.4
Q ss_pred HhcCCCCEEEecCCCcc----chHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHH
Q 014603 129 VLARPGANILLPRPGFP----YYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQH 204 (422)
Q Consensus 129 ~l~~~gd~Vl~~~~~~~----~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~ 204 (422)
.+.++-+-+++++|... ++....+..+.. +|+.-.+.+..+++.+++.+..+..-++...++.-.|.. +
T Consensus 272 ~l~e~y~i~~iEdPl~~~D~~g~~~L~~~~~~~---ipI~gdE~~~t~~~~~~~~i~~~a~d~v~ik~~~~GGit----e 344 (425)
T PRK00077 272 ELVDKYPIVSIEDGLDENDWEGWKLLTEKLGDK---VQLVGDDLFVTNTKRLKKGIEKGAANSILIKVNQIGTLT----E 344 (425)
T ss_pred HHHhhCCcEEEEcCCCCccHHHHHHHHHhcCCC---CeEEcCCCccCCHHHHHHHHHhCCCCEEEeCccccCCHH----H
Confidence 34444567889999864 333333333211 222222222346888888887655445566666644444 7
Q ss_pred HHHHHHHHHHcCcEEE
Q 014603 205 LQKIAETAKKLGIMVI 220 (422)
Q Consensus 205 l~~i~~~~~~~~~~li 220 (422)
..+++++|+.+|+.++
T Consensus 345 a~~ia~lA~~~gi~~~ 360 (425)
T PRK00077 345 TLDAIELAKRAGYTAV 360 (425)
T ss_pred HHHHHHHHHHcCCeEE
Confidence 8899999999999765
No 440
>PF03652 UPF0081: Uncharacterised protein family (UPF0081); InterPro: IPR005227 Holliday junction resolvases (HJRs) are key enzymes of DNA recombination. The principal HJRs are now known or confidently predicted for all bacteria and archaea whose genomes have been completely sequenced, with many species encoding multiple potential HJRs. Structural and evolutionary relationships of HJRs and related nucleases suggests that the HJR function has evolved independently from at least four distinct structural folds, namely RNase H, endonuclease, endonuclease VII-colicin E and RusA (IPR008822 from INTERPRO): The endonuclease fold, whose structural prototypes are the phage exonuclease, the very short patch repair nuclease (Vsr) and type II restriction enzymes, is shown to encompass by far a greater diversity of nucleases than previously suspected. This fold unifies archaeal HJRs (IPR002732 from INTERPRO), repair nucleases such as RecB (IPR004586 from INTERPRO) and Vsr (IPR004603 from INTERPRO), restriction enzymes and a variety of predicted nucleases whose specific activities remain to be determined. The RNase H fold characterises the RuvC family (IPR002176 from INTERPRO), which is nearly ubiquitous in bacteria, and in addition the YqgF family (IPR005227 from INTERPRO). The proteins of this family, typified by Escherichia coli YqgF, are likely to function as an alternative to RuvC in most bacteria, but could be the principal HJRs in low-GC Gram-positive bacteria and Aquifex. Endonuclease VII of phage T4 (IPR004211 from INTERPRO) is shown to serve as a structural template for many nucleases, including McrA and other type II restriction enzymes. Together with colicin E7, endonuclease VII defines a distinct metal-dependent nuclease fold. Horizontal gene transfer, lineage-specific gene loss and gene family expansion, and non-orthologous gene displacement seem to have been major forces in the evolution of HJRs and related nucleases. A remarkable case of displacement is seen in the Lyme disease spirochete Borrelia burgdorferi, which does not possess any of the typical HJRs, but instead encodes, in its chromosome and each of the linear plasmids, members of the exonuclease family predicted to function as HJRs. The diversity of HJRs and related nucleases in bacteria and archaea contrasts with their near absence in eukaryotes. The few detected eukaryotic representatives of the endonuclease fold and the RNase H fold have probably been acquired from bacteria via horizontal gene transfer. The identity of the principal HJR(s) involved in recombination in eukaryotes remains uncertain; this function could be performed by topoisomerase IB or by a novel, so far undetected, class of enzymes. Likely HJRs and related nucleases were identified in the genomes of numerous bacterial and eukaryotic DNA viruses. Gene flow between viral and cellular genomes has probably played a major role in the evolution of this class of enzymes. This family represents the YqgF family of putative Holliday junction resolvases. With the exception of the spirochetes, the YqgF family is represented in all bacterial lineages, including the mycoplasmas with their highly degenerate genomes. The RuvC resolvases are conspicuously absent in the low-GC Gram-positive bacterial lineage, with the exception of Ureaplasma parvum (Ureaplasma urealyticum biotype 1) (Q9PQY7 from SWISSPROT, []). Furthermore, loss of function ruvC mutants of E. coli show a residual HJR activity that cannot be ascribed to the prophage-encoded RusA resolvase []. This suggests that the YqgF family proteins could be alternative HJRs whose function partially overlaps with that of RuvC [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006281 DNA repair, 0006310 DNA recombination, 0006974 response to DNA damage stimulus, 0005737 cytoplasm; PDB: 1NU0_A 1OVQ_A 1NMN_B 1VHX_B 1IV0_A.
Probab=42.26 E-value=93 Score=24.50 Aligned_cols=58 Identities=31% Similarity=0.406 Sum_probs=38.3
Q ss_pred ccCHHHHHHhhcC-CceEEEEeCCCCCcccccC-HHHHHHHHHHH-HHc-CcEEE-Ecccccc
Q 014603 170 EVDLDAVEALADE-NTVALVIINPGNPCGNVYT-YQHLQKIAETA-KKL-GIMVI-ADEVYDH 227 (422)
Q Consensus 170 ~~d~~~l~~~~~~-~~~~i~i~~p~nptG~~~~-~~~l~~i~~~~-~~~-~~~li-~D~~~~~ 227 (422)
..+.+.|.+.+.+ ++..+++-.|-|..|..-+ ...+.+.++.. ++. ++.|+ +||-++.
T Consensus 37 ~~~~~~l~~li~~~~i~~iVvGlP~~~~G~~~~~~~~v~~f~~~L~~~~~~ipV~~~DEr~TT 99 (135)
T PF03652_consen 37 EKDIEELKKLIEEYQIDGIVVGLPLNMDGSESEQARRVRKFAEELKKRFPGIPVILVDERLTT 99 (135)
T ss_dssp CCCHHHHHHHHHHCCECEEEEEEEBBCTSSC-CCHHHHHHHHHHHHHHH-TSEEEEEECSCSH
T ss_pred chHHHHHHHHHHHhCCCEEEEeCCcccCCCccHHHHHHHHHHHHHHHhcCCCcEEEECCChhH
Confidence 4688899888755 5778888999776665322 24455555544 344 77655 8998864
No 441
>cd03313 enolase Enolase: Enolases are homodimeric enzymes that catalyse the reversible dehydration of 2-phospho-D-glycerate to phosphoenolpyruvate as part of the glycolytic and gluconeogenesis pathways. The reaction is facilitated by the presence of metal ions.
Probab=41.89 E-value=80 Score=30.36 Aligned_cols=93 Identities=10% Similarity=0.055 Sum_probs=55.6
Q ss_pred HHHHHHHHHHhcCCCCEEEecCCCccc----hHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCC
Q 014603 120 TQAIEVILTVLARPGANILLPRPGFPY----YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNP 195 (422)
Q Consensus 120 ~~a~~~~~~~l~~~gd~Vl~~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~np 195 (422)
.+++.... .+.++-+-+++++|.... +....+..|..+ |+--.+.+..+++.+++.+..+..-++...++.-
T Consensus 264 ~eai~~~~-~l~e~~~i~~iEdPl~~~D~eg~~~L~~~~g~~i---pi~gdE~~~~~~~~~~~~i~~~a~d~v~ik~~~i 339 (408)
T cd03313 264 EELIDYYK-ELVKKYPIVSIEDPFDEDDWEGWAKLTAKLGDKI---QIVGDDLFVTNPERLKKGIEKKAANALLIKVNQI 339 (408)
T ss_pred HHHHHHHH-HHHHhCCcEEEEeCCCCcCHHHHHHHHHhcCCCC---eEEcCCcccCCHHHHHHHHHhCCCCEEEEccccc
Confidence 44544433 333444677889988643 333333332222 2211222334788888888766544556666664
Q ss_pred cccccCHHHHHHHHHHHHHcCcEEE
Q 014603 196 CGNVYTYQHLQKIAETAKKLGIMVI 220 (422)
Q Consensus 196 tG~~~~~~~l~~i~~~~~~~~~~li 220 (422)
.|.. +..+++++|+.+|+.++
T Consensus 340 GGit----e~~~ia~lA~~~G~~~~ 360 (408)
T cd03313 340 GTLT----ETIEAIKLAKKNGYGVV 360 (408)
T ss_pred CCHH----HHHHHHHHHHHcCCeEE
Confidence 5544 78899999999999886
No 442
>cd00951 KDGDH 5-dehydro-4-deoxyglucarate dehydratase, also called 5-keto-4-deoxy-glucarate dehydratase (KDGDH), which is member of dihydrodipicolinate synthase (DHDPS) family that comprises several pyruvate-dependent class I aldolases. The enzyme is involved in glucarate metabolism, and its mechanism presumbly involves a Schiff-base intermediate similar to members of DHDPS family. While in the case of Pseudomonas sp. 5-dehydro-4-deoxy-D-glucarate is degraded by KDGDH to 2,5-dioxopentanoate, in certain species of Enterobacteriaceae it is degraded instead to pyruvate and glycerate.
Probab=41.16 E-value=1e+02 Score=28.01 Aligned_cols=47 Identities=19% Similarity=0.048 Sum_probs=30.5
Q ss_pred CcccCHHHHHHhh----cCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHc
Q 014603 168 GWEVDLDAVEALA----DENTVALVIINPGNPCGNVYTYQHLQKIAETAKKL 215 (422)
Q Consensus 168 ~~~~d~~~l~~~~----~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~ 215 (422)
+..+|.+.+++.+ +.+...++ ...++.-+..++.+++.++++.+.+.
T Consensus 15 dg~iD~~~l~~l~~~l~~~Gv~gi~-v~GstGE~~~Ls~eEr~~l~~~~~~~ 65 (289)
T cd00951 15 DGSFDEDAYRAHVEWLLSYGAAALF-AAGGTGEFFSLTPDEYAQVVRAAVEE 65 (289)
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEE-ECcCCcCcccCCHHHHHHHHHHHHHH
Confidence 3568888877654 33445554 44455556678888888888876654
No 443
>COG0656 ARA1 Aldo/keto reductases, related to diketogulonate reductase [General function prediction only]
Probab=40.58 E-value=2.4e+02 Score=25.48 Aligned_cols=130 Identities=18% Similarity=0.202 Sum_probs=69.9
Q ss_pred HHHHHHHHhhCC-----CCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEec----------CHHHHHHHHHHHhc
Q 014603 67 AVDAIVHSVRSA-----RFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTL----------GCTQAIEVILTVLA 131 (422)
Q Consensus 67 v~~a~~~~~~~~-----~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~----------g~~~a~~~~~~~l~ 131 (422)
..+++..++..+ ....|+. ....=++|++ - ++.-+++|+|+ ....|++..+.-|-
T Consensus 30 ~~~av~~Al~~Gyr~IDTA~~Ygn---E~~VG~aI~~-s------~v~ReelFittKvw~~~~~~~~~~~a~e~Sl~rLg 99 (280)
T COG0656 30 AVRAVRAALELGYRLIDTAEIYGN---EEEVGEAIKE-S------GVPREELFITTKVWPSDLGYDETLKALEASLKRLG 99 (280)
T ss_pred HHHHHHHHHHhCcceEecHhHhcC---HHHHHHHHHh-c------CCCHHHeEEEeecCCccCCcchHHHHHHHHHHHhC
Confidence 566666666542 1123442 2344455555 1 56678888873 23445555554442
Q ss_pred -CCCCEEEecCCC---cc----chHHHHhhCC-CeEEEeeccCCCCcccCHHHHHHhhcCCce--EE--EEeCCCCCccc
Q 014603 132 -RPGANILLPRPG---FP----YYEARATHSH-LEVRHFDLLPAKGWEVDLDAVEALADENTV--AL--VIINPGNPCGN 198 (422)
Q Consensus 132 -~~gd~Vl~~~~~---~~----~~~~~~~~~g-~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~--~i--~i~~p~nptG~ 198 (422)
+-=|-.++..|. +. .|....+... ..++.+.+. + ++.+.|+++++.... ++ +-.+|..+
T Consensus 100 ~dyvDLyLiHwP~~~~~~~~~etw~alE~l~~~G~ir~IGVS---N--F~~~~L~~l~~~~~~~p~~NQIe~hp~~~--- 171 (280)
T COG0656 100 LDYVDLYLIHWPVPNKYVVIEETWKALEELVDEGLIRAIGVS---N--FGVEHLEELLSLAKVKPAVNQIEYHPYLR--- 171 (280)
T ss_pred CCceeEEEECCCCCccCccHHHHHHHHHHHHhcCCccEEEee---C--CCHHHHHHHHHhcCCCCceEEEEeccCCC---
Confidence 223788898885 32 2222222222 256777763 2 677888877654221 11 22233321
Q ss_pred ccCHHHHHHHHHHHHHcCcEEE
Q 014603 199 VYTYQHLQKIAETAKKLGIMVI 220 (422)
Q Consensus 199 ~~~~~~l~~i~~~~~~~~~~li 220 (422)
-.+++++|+++|+.+.
T Consensus 172 ------q~el~~~~~~~gI~v~ 187 (280)
T COG0656 172 ------QPELLPFCQRHGIAVE 187 (280)
T ss_pred ------cHHHHHHHHHcCCEEE
Confidence 2339999999999886
No 444
>PTZ00081 enolase; Provisional
Probab=37.99 E-value=1.3e+02 Score=29.14 Aligned_cols=96 Identities=13% Similarity=0.129 Sum_probs=58.7
Q ss_pred CHHHHHHHHHHHhcCCCCEEEecCCCcc----chHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCC
Q 014603 118 GCTQAIEVILTVLARPGANILLPRPGFP----YYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPG 193 (422)
Q Consensus 118 g~~~a~~~~~~~l~~~gd~Vl~~~~~~~----~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~ 193 (422)
++.+.+....+.+ ++-+-+++++|... +|....+..|-.+..+ -.+.+..+++.+.+.+..+..-++..-++
T Consensus 282 s~~eli~~~~~~l-~~y~I~~IEDPl~~~D~eg~~~Lt~~lg~~i~Iv---gDE~~~tn~~~l~~~I~~~aad~i~iKvn 357 (439)
T PTZ00081 282 TGEELVELYLDLV-KKYPIVSIEDPFDQDDWEAYAKLTAAIGQKVQIV---GDDLLVTNPTRIKKAIEKKACNALLLKVN 357 (439)
T ss_pred CHHHHHHHHHHHH-hcCCcEEEEcCCCcccHHHHHHHHHhhCCCceEE---cCCcccCCHHHHHHHHHhCCCCEEEeccc
Confidence 4555555544444 34457788999864 4444444443232222 22223356888888887665555566666
Q ss_pred CCcccccCHHHHHHHHHHHHHcCcEEEE
Q 014603 194 NPCGNVYTYQHLQKIAETAKKLGIMVIA 221 (422)
Q Consensus 194 nptG~~~~~~~l~~i~~~~~~~~~~li~ 221 (422)
. .|.+ .+..+++++|+++|+.+++
T Consensus 358 q-iGGI---Te~l~~a~lA~~~Gi~~ii 381 (439)
T PTZ00081 358 Q-IGTV---TEAIEAAKLAQKNGWGVMV 381 (439)
T ss_pred c-ccCH---HHHHHHHHHHHHcCCcEEE
Confidence 5 4444 4788899999999988776
No 445
>cd06569 GH20_Sm-chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=37.22 E-value=74 Score=30.97 Aligned_cols=30 Identities=27% Similarity=0.205 Sum_probs=24.9
Q ss_pred CcccccCHHHHHHHHHHHHHcCcEEE--Eccc
Q 014603 195 PCGNVYTYQHLQKIAETAKKLGIMVI--ADEV 224 (422)
Q Consensus 195 ptG~~~~~~~l~~i~~~~~~~~~~li--~D~~ 224 (422)
+.+-.++.+++++|++.|+++|+-|| +|.-
T Consensus 89 ~~~g~YT~~di~eiv~yA~~rgI~VIPEID~P 120 (445)
T cd06569 89 SGSGYYSRADYIEILKYAKARHIEVIPEIDMP 120 (445)
T ss_pred ccCCccCHHHHHHHHHHHHHcCCEEEEccCCc
Confidence 34567999999999999999999888 5543
No 446
>TIGR02104 pulA_typeI pullulanase, type I. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family consists of pullulanases related to the subfamilies described in TIGR02102 and TIGR02103 but having a different domain architecture with shorter sequences. Members are called type I pullulanases.
Probab=36.87 E-value=37 Score=34.56 Aligned_cols=26 Identities=35% Similarity=0.603 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHcCcEEEEccccccc
Q 014603 203 QHLQKIAETAKKLGIMVIADEVYDHL 228 (422)
Q Consensus 203 ~~l~~i~~~~~~~~~~li~D~~~~~~ 228 (422)
++++++++.|++.|+-||.|-++...
T Consensus 229 ~efk~lV~~~H~~Gi~VilDvV~NH~ 254 (605)
T TIGR02104 229 RELKQMIQALHENGIRVIMDVVYNHT 254 (605)
T ss_pred HHHHHHHHHHHHCCCEEEEEEEcCCc
Confidence 89999999999999999999998764
No 447
>PF04016 DUF364: Domain of unknown function (DUF364); InterPro: IPR007161 This is a entry represents of bacterial and archaeal proteins of unknown function.; PDB: 3L5O_B 3NPG_A.
Probab=36.56 E-value=1.1e+02 Score=24.56 Aligned_cols=76 Identities=22% Similarity=0.284 Sum_probs=43.4
Q ss_pred CCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCC----CcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHH
Q 014603 132 RPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAK----GWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQK 207 (422)
Q Consensus 132 ~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~----~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~ 207 (422)
.+|++|.+.-. +.++....+..+.++..+.+++.. ...+..+.-++.+.. ..++++ ||..+-...++.
T Consensus 9 ~~~~~V~~VG~-f~P~~~~l~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~l~~-aD~vii------TGsTlvN~Ti~~ 80 (147)
T PF04016_consen 9 GPGDKVGMVGY-FQPLVEKLKERGAEVRVFDLNPDNIGEEPGDVPDEDAEEILPW-ADVVII------TGSTLVNGTIDD 80 (147)
T ss_dssp TTTSEEEEES---HCCHHHHCCCCSEEEEEESSGGG--SSCT-EEGGGHHHHGGG--SEEEE------ECHHCCTTTHHH
T ss_pred cCCCEEEEEcC-cHHHHHHHhcCCCCEEEEECCCCCCCCCCCcCCHHHHHHHHcc-CCEEEE------EeeeeecCCHHH
Confidence 46778777653 223455555567788888877621 112233444555553 444544 555554466899
Q ss_pred HHHHHHHc
Q 014603 208 IAETAKKL 215 (422)
Q Consensus 208 i~~~~~~~ 215 (422)
|.+.|++.
T Consensus 81 iL~~~~~~ 88 (147)
T PF04016_consen 81 ILELARNA 88 (147)
T ss_dssp HHHHTTTS
T ss_pred HHHhCccC
Confidence 99999853
No 448
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=36.54 E-value=35 Score=30.90 Aligned_cols=27 Identities=33% Similarity=0.538 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHcCcEEEEcccccccc
Q 014603 203 QHLQKIAETAKKLGIMVIADEVYDHLA 229 (422)
Q Consensus 203 ~~l~~i~~~~~~~~~~li~D~~~~~~~ 229 (422)
++++++++.|+++|+.||.|-+.....
T Consensus 52 ~d~~~Lv~~~h~~gi~VilD~V~NH~~ 78 (316)
T PF00128_consen 52 EDFKELVDAAHKRGIKVILDVVPNHTS 78 (316)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEETSEEE
T ss_pred hhhhhhhhccccccceEEEeeeccccc
Confidence 899999999999999999999986543
No 449
>PRK08265 short chain dehydrogenase; Provisional
Probab=36.31 E-value=3e+02 Score=24.15 Aligned_cols=54 Identities=17% Similarity=0.025 Sum_probs=27.0
Q ss_pred CCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeecc
Q 014603 111 DDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLL 164 (422)
Q Consensus 111 ~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~ 164 (422)
..+++|.++...=..+...+.+.|.+|++..-.-.......+..+.++..+..+
T Consensus 7 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D 60 (261)
T PRK08265 7 KVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATD 60 (261)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEec
Confidence 345555544433344455667788787765433222233333334455555543
No 450
>KOG1467 consensus Translation initiation factor 2B, delta subunit (eIF-2Bdelta/GCD2) [Translation, ribosomal structure and biogenesis]
Probab=36.26 E-value=3.4e+02 Score=26.55 Aligned_cols=130 Identities=18% Similarity=0.205 Sum_probs=73.3
Q ss_pred CCCHHHHHHHHHHHhhcCCC-----------CCCCCCEEEecCHHHHHHHHHHHhcCCC--CEEEe-c-CCCccch--HH
Q 014603 87 VGILPARRAIADYLNRDLPY-----------KLSPDDVYLTLGCTQAIEVILTVLARPG--ANILL-P-RPGFPYY--EA 149 (422)
Q Consensus 87 ~g~~~lr~~ia~~l~~~~~~-----------~~~~~~i~~~~g~~~a~~~~~~~l~~~g--d~Vl~-~-~~~~~~~--~~ 149 (422)
..-.+|.+.|-+|+...... .+....+++|-|.+..++.++.-..+.| =+|++ . .|.+-+. ..
T Consensus 325 eaKe~L~~~I~~~i~eki~~A~qaI~q~a~~KI~dgdviltyg~s~vV~~ill~A~~~~k~frVvVVDSRP~~EG~~~lr 404 (556)
T KOG1467|consen 325 EAKEELQSDIDRFIAEKIILADQAISQHAVTKIQDGDVLLTYGSSSVVNMILLEAKELGKKFRVVVVDSRPNLEGRKLLR 404 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEecchHHHHHHHHHHHHhCcceEEEEEeCCCCcchHHHHH
Confidence 34456666666666553221 2445577777777666666554433222 23333 2 4555443 33
Q ss_pred HHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEc-cccc
Q 014603 150 RATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIAD-EVYD 226 (422)
Q Consensus 150 ~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D-~~~~ 226 (422)
.+...|+++.++-++. +-..+.+-+++++=++.--..|.+|++.--..++=.++.+|+.||+= |+|-
T Consensus 405 ~Lv~~GinctYv~I~a----------~syim~evtkvfLGahailsNG~vysR~GTa~valvAna~nVPVlVCCE~yK 472 (556)
T KOG1467|consen 405 RLVDRGINCTYVLINA----------ASYIMLEVTKVFLGAHAILSNGAVYSRVGTACVALVANAFNVPVLVCCEAYK 472 (556)
T ss_pred HHHHcCCCeEEEEehh----------HHHHHHhcceeeechhhhhcCcchhhhcchHHHHHHhcccCCCEEEEechhh
Confidence 3445677776665431 11112223455554555456688888777777888889999988863 3443
No 451
>COG2984 ABC-type uncharacterized transport system, periplasmic component [General function prediction only]
Probab=36.04 E-value=3.5e+02 Score=24.90 Aligned_cols=147 Identities=16% Similarity=0.180 Sum_probs=74.8
Q ss_pred CCcHHHHHHHHHHhhCCCC----CCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEE
Q 014603 62 RTASVAVDAIVHSVRSARF----NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANI 137 (422)
Q Consensus 62 ~~~~~v~~a~~~~~~~~~~----~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~V 137 (422)
|...+.++-+.+.+.+... ..|....+.....+.|++.+.. +...++++.++..|=- ++.+... -..|
T Consensus 42 paLd~~~~G~~~aLk~~G~~n~~i~~~na~~~~~~a~~iarql~~------~~~dviv~i~tp~Aq~-~~s~~~~-iPVV 113 (322)
T COG2984 42 PALDAAREGVKEALKDAGYKNVKIDYQNAQGDLGTAAQIARQLVG------DKPDVIVAIATPAAQA-LVSATKT-IPVV 113 (322)
T ss_pred hhHHHHHHHHHHHHHhcCccCeEEEeecCCCChHHHHHHHHHhhc------CCCcEEEecCCHHHHH-HHHhcCC-CCEE
Confidence 3344555555666654322 2455567778888889988853 3446666666554433 3333322 1233
Q ss_pred EecC--CCccchHHHHhhCCCeEEEeeccCCCCcccCHHH---HHHhhcCCceEE-EEeCCCCCcccccCHHHHHHHHHH
Q 014603 138 LLPR--PGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDA---VEALADENTVAL-VIINPGNPCGNVYTYQHLQKIAET 211 (422)
Q Consensus 138 l~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~---l~~~~~~~~~~i-~i~~p~nptG~~~~~~~l~~i~~~ 211 (422)
...- |.-.......+.-|..+.-+ ++ ..+.++ |-+.+-++.+-+ ++.+|+.+.-. ..++++.+.
T Consensus 114 ~aavtd~v~a~Lv~~~~~pg~NvTGv--sD----~~~v~q~i~lik~~~Pnak~Igv~Y~p~E~ns~----~l~eelk~~ 183 (322)
T COG2984 114 FAAVTDPVGAKLVKSLEQPGGNVTGV--SD----LLPVAQQIELIKALLPNAKSIGVLYNPGEANSV----SLVEELKKE 183 (322)
T ss_pred EEccCchhhccCCccccCCCCceeec--CC----cchHHHHHHHHHHhCCCCeeEEEEeCCCCcccH----HHHHHHHHH
Confidence 2222 21111111111112233222 11 122332 222344565555 78888654322 468889999
Q ss_pred HHHcCcEEEEccccc
Q 014603 212 AKKLGIMVIADEVYD 226 (422)
Q Consensus 212 ~~~~~~~li~D~~~~ 226 (422)
+++.|+-|++=.+..
T Consensus 184 A~~~Gl~vve~~v~~ 198 (322)
T COG2984 184 ARKAGLEVVEAAVTS 198 (322)
T ss_pred HHHCCCEEEEEecCc
Confidence 999999998765543
No 452
>PF09885 DUF2112: Uncharacterized protein conserved in archaea (DUF2112); InterPro: IPR012356 The exact function of this protein is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=35.78 E-value=1.2e+02 Score=23.70 Aligned_cols=41 Identities=12% Similarity=0.300 Sum_probs=32.0
Q ss_pred HHHHHHHHHHhcCeEEecCCCCCCCCeEEEEeccChHHHHHHHHHHHHHHHH
Q 014603 366 DMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALEDGLGRMKAFYDR 417 (422)
Q Consensus 366 ~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~l~~~~~~l~~~~~~ 417 (422)
..++...+.++++|.+ +-+.+..++++...++++|.++++.
T Consensus 102 tnEL~~~lir~k~iPi-----------Lel~YP~~~ee~~~~V~~I~~FL~~ 142 (143)
T PF09885_consen 102 TNELTKYLIRQKGIPI-----------LELKYPTNEEEAIDFVNKINDFLKS 142 (143)
T ss_pred HHHHHHHHHhhcCCce-----------EEeeCCCChHHHHHHHHHHHHHHhc
Confidence 4566777777777765 4666778889999999999999875
No 453
>COG2089 SpsE Sialic acid synthase [Cell envelope biogenesis, outer membrane]
Probab=35.59 E-value=3e+02 Score=25.41 Aligned_cols=74 Identities=11% Similarity=0.010 Sum_probs=44.8
Q ss_pred CCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHH
Q 014603 134 GANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAK 213 (422)
Q Consensus 134 gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~ 213 (422)
-.-+...+|+-......+...+.....++.. ...++.-|+...+.+...+ ++ ||.. +.+++++.+++|+
T Consensus 102 ~Gi~~~SSPfd~~svd~l~~~~~~ayKIaS~----E~~~~plik~iA~~~kPiI-lS-----TGma-~~~ei~~av~~~r 170 (347)
T COG2089 102 RGIIFFSSPFDLTAVDLLESLNPPAYKIASG----EINDLPLIKYIAKKGKPII-LS-----TGMA-TIEEIEEAVAILR 170 (347)
T ss_pred cCeEEEecCCCHHHHHHHHhcCCCeEEecCc----cccChHHHHHHHhcCCCEE-EE-----cccc-cHHHHHHHHHHHH
Confidence 3456666666666666777777776666532 2235555655555444333 32 4543 3378888888898
Q ss_pred HcCcE
Q 014603 214 KLGIM 218 (422)
Q Consensus 214 ~~~~~ 218 (422)
++|..
T Consensus 171 ~~g~~ 175 (347)
T COG2089 171 ENGNP 175 (347)
T ss_pred hcCCC
Confidence 88765
No 454
>cd01020 TroA_b Metal binding protein TroA_b. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=35.55 E-value=3.2e+02 Score=24.29 Aligned_cols=78 Identities=18% Similarity=0.245 Sum_probs=43.9
Q ss_pred CCCEEEecCCCccchHHHHhhCCCeEEEee----ccCCCCcccCHHHHHH---hhcCCceEEEEeCCCCCcccccCHHHH
Q 014603 133 PGANILLPRPGFPYYEARATHSHLEVRHFD----LLPAKGWEVDLDAVEA---LADENTVALVIINPGNPCGNVYTYQHL 205 (422)
Q Consensus 133 ~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~----~~~~~~~~~d~~~l~~---~~~~~~~~i~i~~p~nptG~~~~~~~l 205 (422)
++..+++.. ..+.-.++.+|++...+. ..+ .+..+.+..+.+ .++++...+++++|+.+. ...
T Consensus 152 ~~~~~v~~H---~af~Y~~~~yGl~~~~~~~~~~~~~-~~~~ps~~~l~~l~~~ik~~~v~~if~e~~~~~------k~~ 221 (264)
T cd01020 152 KGAPVAATE---PVFDYLLDALGMKERTPKGYTATTE-SETEPSPADIAAFQNAIKNRQIDALIVNPQQAS------SAT 221 (264)
T ss_pred CCCeEEEeC---chHHHHHHHCCCcccCHHHHHhhhc-CCCCCCHHHHHHHHHHHHhCCCCEEEeCCCCCc------HHH
Confidence 345677744 455566778888765321 111 133455555544 445555556677776543 334
Q ss_pred HHHHHHHHHcCcEEE
Q 014603 206 QKIAETAKKLGIMVI 220 (422)
Q Consensus 206 ~~i~~~~~~~~~~li 220 (422)
+.+.+++++.|+.++
T Consensus 222 ~~l~~la~~~~~~v~ 236 (264)
T cd01020 222 TNITGLAKRSGVPVV 236 (264)
T ss_pred HHHHHHHHHcCCCEE
Confidence 556677788887664
No 455
>PRK13936 phosphoheptose isomerase; Provisional
Probab=35.55 E-value=2.7e+02 Score=23.48 Aligned_cols=38 Identities=26% Similarity=0.364 Sum_probs=26.6
Q ss_pred HHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEE
Q 014603 177 EALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIA 221 (422)
Q Consensus 177 ~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 221 (422)
....+++..++++++. |.. .++.++++.+++.|+.+|.
T Consensus 106 a~~~~~~Dv~i~iS~s----G~t---~~~~~~~~~ak~~g~~iI~ 143 (197)
T PRK13936 106 RALGQPGDVLLAISTS----GNS---ANVIQAIQAAHEREMHVVA 143 (197)
T ss_pred HHhCCCCCEEEEEeCC----CCc---HHHHHHHHHHHHCCCeEEE
Confidence 3334566666677663 333 6788999999999988873
No 456
>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]
Probab=35.49 E-value=2.7e+02 Score=25.31 Aligned_cols=87 Identities=18% Similarity=0.267 Sum_probs=53.5
Q ss_pred HHHhcCCCCEEEecCCCccchHHHHhhCC--CeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccc----c
Q 014603 127 LTVLARPGANILLPRPGFPYYEARATHSH--LEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNV----Y 200 (422)
Q Consensus 127 ~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~----~ 200 (422)
.+-|.+-|..|+++--+-.......+..| .++...+.+. .|.+.+.+..+....+|=+.--..+|+.- .
T Consensus 78 vnklak~GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~-----~DedSIr~vvk~sNVVINLIGrd~eTknf~f~Dv 152 (391)
T KOG2865|consen 78 VNKLAKMGSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDL-----RDEDSIRAVVKHSNVVINLIGRDYETKNFSFEDV 152 (391)
T ss_pred HHHHhhcCCeEEEeccCCccchhheeecccccceeeeccCC-----CCHHHHHHHHHhCcEEEEeeccccccCCcccccc
Confidence 44566788999998555443333344333 2555655543 47889998887655555444445566642 1
Q ss_pred CHHHHHHHHHHHHHcCcE
Q 014603 201 TYQHLQKIAETAKKLGIM 218 (422)
Q Consensus 201 ~~~~l~~i~~~~~~~~~~ 218 (422)
...--++|+++|++.|+-
T Consensus 153 n~~~aerlAricke~GVe 170 (391)
T KOG2865|consen 153 NVHIAERLARICKEAGVE 170 (391)
T ss_pred cchHHHHHHHHHHhhChh
Confidence 112358899999998863
No 457
>COG0826 Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones]
Probab=35.17 E-value=1.1e+02 Score=28.67 Aligned_cols=46 Identities=17% Similarity=0.155 Sum_probs=28.2
Q ss_pred CHHHHHHhhcCCceEEEEeCC-CCCccc--ccCHHHHHHHHHHHHHcCc
Q 014603 172 DLDAVEALADENTVALVIINP-GNPCGN--VYTYQHLQKIAETAKKLGI 217 (422)
Q Consensus 172 d~~~l~~~~~~~~~~i~i~~p-~nptG~--~~~~~~l~~i~~~~~~~~~ 217 (422)
+++.+..++..+..++++..+ -+-.+. .++.+++++++++|+++|.
T Consensus 15 ~l~~l~~ai~~GADaVY~G~~~~~~R~~a~nfs~~~l~e~i~~ah~~gk 63 (347)
T COG0826 15 NLEDLKAAIAAGADAVYIGEKEFGLRRRALNFSVEDLAEAVELAHSAGK 63 (347)
T ss_pred CHHHHHHHHHcCCCEEEeCCcccccccccccCCHHHHHHHHHHHHHcCC
Confidence 556666666666666666555 232332 3667777777777777766
No 458
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=34.98 E-value=1.9e+02 Score=21.61 Aligned_cols=21 Identities=29% Similarity=0.515 Sum_probs=16.0
Q ss_pred CHHHHHHHHHHHHHcCcEEEE
Q 014603 201 TYQHLQKIAETAKKLGIMVIA 221 (422)
Q Consensus 201 ~~~~l~~i~~~~~~~~~~li~ 221 (422)
+.++.++|.++++++|..+.+
T Consensus 98 ~~~~~~~l~~~a~~~~~~~~V 118 (120)
T PF01408_consen 98 TLEEAEELVEAAKEKGVKVMV 118 (120)
T ss_dssp SHHHHHHHHHHHHHHTSCEEE
T ss_pred CHHHHHHHHHHHHHhCCEEEE
Confidence 457888888888888877654
No 459
>PRK10785 maltodextrin glucosidase; Provisional
Probab=34.85 E-value=1.1e+02 Score=31.12 Aligned_cols=28 Identities=18% Similarity=0.420 Sum_probs=24.6
Q ss_pred CHHHHHHHHHHHHHcCcEEEEccccccc
Q 014603 201 TYQHLQKIAETAKKLGIMVIADEVYDHL 228 (422)
Q Consensus 201 ~~~~l~~i~~~~~~~~~~li~D~~~~~~ 228 (422)
+.++++++++.|+++|+.||.|-+....
T Consensus 224 t~~df~~Lv~~aH~rGikVilD~V~NH~ 251 (598)
T PRK10785 224 GDAALLRLRHATQQRGMRLVLDGVFNHT 251 (598)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECCCcC
Confidence 4489999999999999999999997643
No 460
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=34.51 E-value=3.4e+02 Score=24.27 Aligned_cols=95 Identities=16% Similarity=0.283 Sum_probs=45.5
Q ss_pred HHHHHHHHhcCCC-CEEEecCCCc---cchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcc
Q 014603 122 AIEVILTVLARPG-ANILLPRPGF---PYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCG 197 (422)
Q Consensus 122 a~~~~~~~l~~~g-d~Vl~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG 197 (422)
+++..+..+.+.| |.|++++--+ ..+...++..|+..+.+-. |. .+.+.++...+.....+++..-...||
T Consensus 107 G~e~F~~~~~~aGvdgviipDLP~ee~~~~~~~~~~~gi~~I~lv~-Pt----T~~eri~~i~~~a~gFIY~vS~~GvTG 181 (263)
T CHL00200 107 GINKFIKKISQAGVKGLIIPDLPYEESDYLISVCNLYNIELILLIA-PT----SSKSRIQKIARAAPGCIYLVSTTGVTG 181 (263)
T ss_pred CHHHHHHHHHHcCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEEEC-CC----CCHHHHHHHHHhCCCcEEEEcCCCCCC
Confidence 3444444454555 6777766443 2234455566665543321 21 234555554443333444444445566
Q ss_pred ccc-CHHHHHHHHHHHHHc-CcEEEE
Q 014603 198 NVY-TYQHLQKIAETAKKL-GIMVIA 221 (422)
Q Consensus 198 ~~~-~~~~l~~i~~~~~~~-~~~li~ 221 (422)
..- -.+.+.++.+..+++ +..+.+
T Consensus 182 ~~~~~~~~~~~~i~~ir~~t~~Pi~v 207 (263)
T CHL00200 182 LKTELDKKLKKLIETIKKMTNKPIIL 207 (263)
T ss_pred CCccccHHHHHHHHHHHHhcCCCEEE
Confidence 521 114456666655543 444444
No 461
>PF03748 FliL: Flagellar basal body-associated protein FliL; InterPro: IPR005503 This FliL protein controls the rotational direction of the flagella during chemotaxis []. FliL is a cytoplasmic membrane protein associated with the basal body [].; GO: 0001539 ciliary or flagellar motility, 0006935 chemotaxis, 0009425 bacterial-type flagellum basal body
Probab=34.31 E-value=47 Score=24.22 Aligned_cols=52 Identities=27% Similarity=0.255 Sum_probs=33.7
Q ss_pred cHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEe
Q 014603 64 ASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLT 116 (422)
Q Consensus 64 ~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~ 116 (422)
.|.+++++...+..-....-....|...+++.+.+.+++..+ ...-++|+||
T Consensus 43 ~~~ird~ii~~l~~~~~~~l~~~~g~~~Lk~~l~~~in~~l~-~~~V~~V~ft 94 (99)
T PF03748_consen 43 MPRIRDAIISYLSSKTAEDLSGPEGKERLKDELKDRINKILG-KGKVKDVYFT 94 (99)
T ss_pred cHHHHHHHHHHHHcCCHHHhcChhhHHHHHHHHHHHHHHhhc-cCcEEEEEEE
Confidence 357777777777654333333447788999999988886554 2234566665
No 462
>PF13407 Peripla_BP_4: Periplasmic binding protein domain; PDB: 3BRS_B 3GBP_A 3GA5_A 1GCG_A 1GCA_A 3H75_A 3D02_A 3L49_B 3EJW_B 3T95_A ....
Probab=33.67 E-value=80 Score=27.57 Aligned_cols=66 Identities=21% Similarity=0.252 Sum_probs=38.3
Q ss_pred hHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEE
Q 014603 147 YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIA 221 (422)
Q Consensus 147 ~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 221 (422)
....++..|..+..+ .+...+..--.+.++..++.+..++++... .++. ...+++.|++.|+.+|.
T Consensus 20 ~~~~a~~~g~~~~~~-~~~~~d~~~q~~~i~~~i~~~~d~Iiv~~~-~~~~-------~~~~l~~~~~~gIpvv~ 85 (257)
T PF13407_consen 20 AKAAAKELGYEVEIV-FDAQNDPEEQIEQIEQAISQGVDGIIVSPV-DPDS-------LAPFLEKAKAAGIPVVT 85 (257)
T ss_dssp HHHHHHHHTCEEEEE-EESTTTHHHHHHHHHHHHHTTESEEEEESS-STTT-------THHHHHHHHHTTSEEEE
T ss_pred HHHHHHHcCCEEEEe-CCCCCCHHHHHHHHHHHHHhcCCEEEecCC-CHHH-------HHHHHHHHhhcCceEEE
Confidence 356677788887775 112222122334566677778887765443 3332 23444556778998885
No 463
>TIGR03679 arCOG00187 arCOG00187 universal archaeal metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein. This model has the same scope as an archaeal COG (arCOG00187) and is found in all completely sequenced archaea and does not recognize any known non-archaeal genes.
Probab=33.33 E-value=3.2e+02 Score=23.57 Aligned_cols=97 Identities=16% Similarity=0.241 Sum_probs=49.2
Q ss_pred EEecCHHHHHHHHHHHhcCCCCEE--E-ecCC------Ccc-----chHHHHhhCCCeEEEeeccCCCCcccCHHHHHHh
Q 014603 114 YLTLGCTQAIEVILTVLARPGANI--L-LPRP------GFP-----YYEARATHSHLEVRHFDLLPAKGWEVDLDAVEAL 179 (422)
Q Consensus 114 ~~~~g~~~a~~~~~~~l~~~gd~V--l-~~~~------~~~-----~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~ 179 (422)
++.+||..+..++..+.. .|..| + +..+ .++ .....++..|++...+.+..... ...+.+..+
T Consensus 2 vl~SGGkDS~~al~~a~~-~G~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~A~~lgip~~~i~~~~~~~--~~~~~l~~~ 78 (218)
T TIGR03679 2 ALYSGGKDSNYALYKALE-EGHEVRCLITVVPENEESYMFHTPNIELTRLQAEALGIPLVKIETSGEKE--KEVEDLKGA 78 (218)
T ss_pred eeecCcHHHHHHHHHHHH-cCCEEEEEEEeccCCCCccccCCCCHHHHHHHHHHhCCCEEEEECCCCCh--HHHHHHHHH
Confidence 567788888877766654 56554 2 2222 112 22456667787766666532111 122223322
Q ss_pred h----cCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEE
Q 014603 180 A----DENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVI 220 (422)
Q Consensus 180 ~----~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li 220 (422)
+ ..+...++ +|.+.+......+-++|.+.|+.++
T Consensus 79 l~~~~~~g~~~vv-------~G~i~sd~~~~~~e~v~~~~gl~~~ 116 (218)
T TIGR03679 79 LKELKREGVEGIV-------TGAIASRYQKSRIERICEELGLKVF 116 (218)
T ss_pred HHHHHHcCCCEEE-------ECCcccHhHHHHHHHHHHhCCCeEE
Confidence 2 22444444 5555554455555567766665543
No 464
>TIGR00160 MGSA methylglyoxal synthase. Methylglyoxal synthase (MGS) generates methylglyoxal (MG), a toxic metabolite (that may also be a regulatory metabolite and) that is detoxified, prinicipally, through a pathway involving glutathione and glyoxylase I. Totemeyer, et al. (MUID:98149311) propose that, during a loss of control over carbon flux, with accumulation of phosphorylated sugars and depletion of phosphate, as might happen during a rapid shift to a richer medium, MGS aids the cell by converting some dihydroxyacetone phosphate (DHAP) to MG and phosphate. This is therefore an alternative to triosephosphate isomerase and the remainder of the glycolytic pathway for the disposal of DHAP during the stress of a sudden increase in available sugars.
Probab=33.14 E-value=1.6e+02 Score=23.47 Aligned_cols=68 Identities=15% Similarity=0.176 Sum_probs=42.2
Q ss_pred CCeEEEeeccCCCCcccCHHHHHHhhcC-Cce-EEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccc
Q 014603 155 HLEVRHFDLLPAKGWEVDLDAVEALADE-NTV-ALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLA 229 (422)
Q Consensus 155 g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~-~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~ 229 (422)
|.++..+..-|-++ | .++-+.+.. +.. ++++..|-++-..- .+++.|.++|.-||+++-...+-+.+.
T Consensus 48 gL~V~~~~SGplGG---D-qQIga~Ia~g~id~vIFf~DPl~~~phe---pDi~aLlRlc~v~nIP~AtN~aTA~~l 117 (143)
T TIGR00160 48 GLNINAMLSGPMGG---D-QQIGALIAEGKIDAVIFFWDPLNAQPHE---PDVKALLRLCTVWNIPLATNVATADFL 117 (143)
T ss_pred CCCeEEeccCCccH---H-HHHHHHHHhCCCCEEEEecCCCCCCCCC---cCHHHHHHHHHhhCcccccCHHHHHHH
Confidence 55555443323222 3 344444432 333 45677887766555 579999999999999988777665443
No 465
>PF01008 IF-2B: Initiation factor 2 subunit family; InterPro: IPR000649 Initiation factor 2 binds to Met-tRNA, GTP and the small ribosomal subunit. The eukaryotic translation initiation factor EIF-2B is a complex made up of five different subunits, alpha, beta, gamma, delta and epsilon, and catalyses the exchange of EIF-2-bound GDP for GTP. This family includes initiation factor 2B alpha, beta and delta subunits from eukaryotes; related proteins from archaebacteria and IF-2 from prokaryotes and also contains a subfamily of proteins in eukaryotes, archaeae (e.g. Pyrococcus furiosus), or eubacteria such as Bacillus subtilis and Thermotoga maritima. Many of these proteins were initially annotated as putative translation initiation factors despite the fact that there is no evidence for the requirement of an IF2 recycling factor in prokaryotic translation initiation. Recently, one of these proteins from B. subtilis has been functionally characterised as a 5-methylthioribose-1-phosphate isomerase (MTNA) []. This enzyme participates in the methionine salvage pathway catalysing the isomerisation of 5-methylthioribose-1-phosphate to 5-methylthioribulose-1-phosphate []. The methionine salvage pathway leads to the synthesis of methionine from methylthioadenosine, the end product of the spermidine and spermine anabolism in many species.; GO: 0044237 cellular metabolic process; PDB: 1VB5_A 1T5O_D 3A11_E 3VM6_C 1W2W_A 1T9K_A 3ECS_B 2YRF_A 2YVK_B 2A0U_A ....
Probab=33.13 E-value=3e+02 Score=24.68 Aligned_cols=118 Identities=20% Similarity=0.188 Sum_probs=55.0
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCC--CEEEec--CCCccch--HHHHhhCCCeEEEeecc
Q 014603 91 PARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPG--ANILLP--RPGFPYY--EARATHSHLEVRHFDLL 164 (422)
Q Consensus 91 ~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g--d~Vl~~--~~~~~~~--~~~~~~~g~~~~~~~~~ 164 (422)
..++.|++.... -+....+++|-|-+..+..++....+.| =+|++. .|...+. .......|+++..++-
T Consensus 92 ~~~~~I~~~~~~----~I~~~~~ILT~~~S~~v~~~l~~a~~~~~~~~V~v~es~P~~eG~~~a~~L~~~gi~v~~i~d- 166 (282)
T PF01008_consen 92 QAREKIADHASE----LINDGDTILTHGYSSTVERFLLSAKKKGKKFRVIVLESRPYNEGRLMAKELAEAGIPVTLIPD- 166 (282)
T ss_dssp HHHHHHHHHHHC----CC-TTEEEEEES--SHHHHHHHHHHHTTEEEEEEEE--TTTTHHHTHHHHHHHTT-EEEEE-G-
T ss_pred HHHHHHHHHHHH----hccCCeEEEEeCCchHHHHHHHHHHHcCCeEEEEEccCCcchhhhhHHHHhhhcceeEEEEec-
Confidence 344455555443 3456678888887777766666654444 245554 4555442 2333345777766542
Q ss_pred CCCCcccCHHHHHHhhcCCceEEEEe-CCCCCcccccCHHHHHHHHHHHHHcCcEEEEc
Q 014603 165 PAKGWEVDLDAVEALADENTVALVII-NPGNPCGNVYTYQHLQKIAETAKKLGIMVIAD 222 (422)
Q Consensus 165 ~~~~~~~d~~~l~~~~~~~~~~i~i~-~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D 222 (422)
..+-..+..+...+++. ..--+.|.++.+-=-..++-.|+++++.+++=
T Consensus 167 ---------~~~~~~m~~~vd~VliGad~v~~nG~v~nk~Gt~~~a~~Ak~~~vPv~v~ 216 (282)
T PF01008_consen 167 ---------SAVGYVMPRDVDKVLIGADAVLANGGVVNKVGTLQLALAAKEFNVPVYVL 216 (282)
T ss_dssp ---------GGHHHHHHCTESEEEEE-SEEETTS-EEEETTHHHHHHHHHHTT-EEEEE
T ss_pred ---------hHHHHHHHHhCCeeEEeeeEEecCCCEeehhhHHHHHHHHHhhCCCEEEE
Confidence 23333343313223222 22222332222222234556788999887754
No 466
>PRK03892 ribonuclease P protein component 3; Provisional
Probab=33.05 E-value=3.1e+02 Score=23.45 Aligned_cols=41 Identities=17% Similarity=0.216 Sum_probs=25.0
Q ss_pred cCCceEEEEe-CC---CCCcccccCHHHHHHHHHHHHHcCcEEEE
Q 014603 181 DENTVALVII-NP---GNPCGNVYTYQHLQKIAETAKKLGIMVIA 221 (422)
Q Consensus 181 ~~~~~~i~i~-~p---~nptG~~~~~~~l~~i~~~~~~~~~~li~ 221 (422)
.++..++=++ .| .++.-..-....+.++.+++++|++++++
T Consensus 127 a~n~VAIe~~L~plL~~~G~~Rar~L~~~r~~l~L~rKYd~P~VI 171 (216)
T PRK03892 127 AKRGVAIGFSLSPLLRANPYERANILRFMMKAWQLVNKYKVPRFI 171 (216)
T ss_pred HHcCeEEEEecHHHHhhCchhHHHHHHHHHHHHHHHHHcCCCEEE
Confidence 3345555343 33 23333333447788999999999887764
No 467
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase. Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1-4)-alpha-D-glucano}trehalose trehalohydrolase (EC 3.2.1.141). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system.
Probab=32.72 E-value=57 Score=32.70 Aligned_cols=28 Identities=36% Similarity=0.622 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHHcCcEEEEcccccccc
Q 014603 202 YQHLQKIAETAKKLGIMVIADEVYDHLA 229 (422)
Q Consensus 202 ~~~l~~i~~~~~~~~~~li~D~~~~~~~ 229 (422)
.++++++++.|+++|+-||.|-++....
T Consensus 159 ~~e~k~lV~~aH~~Gi~VilD~V~NH~~ 186 (542)
T TIGR02402 159 PDDLKALVDAAHGLGLGVILDVVYNHFG 186 (542)
T ss_pred HHHHHHHHHHHHHCCCEEEEEEccCCCC
Confidence 4899999999999999999999987654
No 468
>TIGR00064 ftsY signal recognition particle-docking protein FtsY. There is a weak division between FtsY and SRP54; both are GTPases. In E.coli, ftsY is an essential gene located in an operon with cell division genes ftsE and ftsX, but its apparent function is as the signal recognition particle docking protein.
Probab=32.61 E-value=3.6e+02 Score=24.17 Aligned_cols=47 Identities=19% Similarity=0.210 Sum_probs=28.9
Q ss_pred HhhcCCceEEEEeCCC-CCcccccCHHHHHHHHHHHH------HcCcEEEEcccc
Q 014603 178 ALADENTVALVIINPG-NPCGNVYTYQHLQKIAETAK------KLGIMVIADEVY 225 (422)
Q Consensus 178 ~~~~~~~~~i~i~~p~-nptG~~~~~~~l~~i~~~~~------~~~~~li~D~~~ 225 (422)
.....+...+++-.|. ++. ...-.++++++.+.+. .+++++++|...
T Consensus 149 ~~~~~~~D~ViIDT~G~~~~-d~~~~~el~~~~~~~~~~~~~~~~~~~LVl~a~~ 202 (272)
T TIGR00064 149 KAKARNIDVVLIDTAGRLQN-KVNLMDELKKIKRVIKKVDKDAPDEVLLVLDATT 202 (272)
T ss_pred HHHHCCCCEEEEeCCCCCcc-hHHHHHHHHHHHHHHhcccCCCCceEEEEEECCC
Confidence 3334456667777663 332 1111257778888777 678899999864
No 469
>PRK07226 fructose-bisphosphate aldolase; Provisional
Probab=32.06 E-value=1.5e+02 Score=26.57 Aligned_cols=46 Identities=22% Similarity=0.322 Sum_probs=26.4
Q ss_pred HHHHHhhcCCceEEE-EeCCCC-CcccccCHHHHHHHHHHHHHcCcEEEE
Q 014603 174 DAVEALADENTVALV-IINPGN-PCGNVYTYQHLQKIAETAKKLGIMVIA 221 (422)
Q Consensus 174 ~~l~~~~~~~~~~i~-i~~p~n-ptG~~~~~~~l~~i~~~~~~~~~~li~ 221 (422)
.+++++++.+...+- ..+... .... -.+++.++.+.|+++|+.+++
T Consensus 97 ~~ve~A~~~Gad~v~~~~~~g~~~~~~--~~~~~~~v~~~~~~~g~pl~v 144 (267)
T PRK07226 97 GTVEEAIKLGADAVSVHVNVGSETEAE--MLEDLGEVAEECEEWGMPLLA 144 (267)
T ss_pred ecHHHHHHcCCCEEEEEEecCChhHHH--HHHHHHHHHHHHHHcCCcEEE
Confidence 345555655544442 222221 1222 236788888999999988776
No 470
>KOG3974 consensus Predicted sugar kinase [Carbohydrate transport and metabolism]
Probab=31.80 E-value=1.9e+02 Score=25.71 Aligned_cols=48 Identities=23% Similarity=0.297 Sum_probs=30.7
Q ss_pred CHHHHHHhhcCCceEEEEeCC--CCCcccccCHHHHHHHHHHHHHcCcEEEEccc
Q 014603 172 DLDAVEALADENTVALVIINP--GNPCGNVYTYQHLQKIAETAKKLGIMVIADEV 224 (422)
Q Consensus 172 d~~~l~~~~~~~~~~i~i~~p--~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~ 224 (422)
..+.+++.+. +-.++++-.. -+| ++. ..+++|.+.++..++.+++|.=
T Consensus 91 av~~i~k~L~-RlhavVIGPGLGRdp-~~~---k~i~~iley~~~~dvP~VIDaD 140 (306)
T KOG3974|consen 91 AVDIIEKLLQ-RLHAVVIGPGLGRDP-AIL---KEIAKILEYLRGKDVPLVIDAD 140 (306)
T ss_pred hHhHHHHHHh-heeEEEECCCCCCCH-HHH---HHHHHHHHHHhcCCCcEEEcCC
Confidence 3455555454 4455544332 222 222 6789999999999999999954
No 471
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=31.58 E-value=2.3e+02 Score=27.76 Aligned_cols=74 Identities=11% Similarity=0.085 Sum_probs=41.8
Q ss_pred cCCCCEEEecCCCccchHHHH-hhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHH
Q 014603 131 ARPGANILLPRPGFPYYEARA-THSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIA 209 (422)
Q Consensus 131 ~~~gd~Vl~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~ 209 (422)
+++||+|.+-.|.|..|.... ....+..+.++++|. ..-++++-.+++-...+++..|..-+-. .-+-+.
T Consensus 99 L~kGDrVgvwgpN~~~w~l~~lA~A~AG~v~v~~NP~----Yq~~elr~~L~k~~~k~l~~p~~~k~~n-----y~~~l~ 169 (596)
T KOG1177|consen 99 LKKGDRVGVWGPNSYEWVLCQLACARAGLVLVNLNPA----YQSEELRYVLKKVGCKALFAPPQFKTQN-----YYETLL 169 (596)
T ss_pred CCCCCEEEEecCChHHHHHHHHHHHHhceEEeccCcc----cccHHHHHHHhhcCeEEEEccchhhhch-----HHHHHH
Confidence 579999999999987764322 223445666776653 2245666666553333444455443322 234455
Q ss_pred HHHH
Q 014603 210 ETAK 213 (422)
Q Consensus 210 ~~~~ 213 (422)
++|-
T Consensus 170 ~icP 173 (596)
T KOG1177|consen 170 EICP 173 (596)
T ss_pred HhhH
Confidence 5554
No 472
>PF03786 UxuA: D-mannonate dehydratase (UxuA); InterPro: IPR004628 This Fe2+-requiring enzyme plays a role in D-glucuronate catabolism in Escherichia coli. Mannonate dehydratase converts D-mannonate to 2-dehydro-3-deoxy-D-gluconate. An apparent equivalog is found in a glucuronate utilization operon in Bacillus stearothermophilus T-6.; GO: 0008927 mannonate dehydratase activity, 0006064 glucuronate catabolic process; PDB: 1TZ9_A 3FVM_A 3BDK_B 3BAN_B 3DBN_B.
Probab=31.39 E-value=93 Score=29.01 Aligned_cols=50 Identities=16% Similarity=0.329 Sum_probs=30.8
Q ss_pred CHHHHHHhhcC-CceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEE
Q 014603 172 DLDAVEALADE-NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIA 221 (422)
Q Consensus 172 d~~~l~~~~~~-~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 221 (422)
|+..|....+. +...++..-+..|.|.+++.+++.++.+.+.++|+.+-+
T Consensus 13 dpv~l~~irQ~~Gv~giV~al~~~p~g~~W~~e~i~~~k~~ie~~GL~~~v 63 (351)
T PF03786_consen 13 DPVTLWDIRQQPGVTGIVTALHDIPNGEVWDYEEIRALKERIEAAGLTLSV 63 (351)
T ss_dssp -SS-HHHHCTSTTEEEEEE--SSS-TTS---HHHHHHHHHHHHCTT-EEEE
T ss_pred CcchHHHHHHhcCCCCeeeCCCCCCCCCCCCHHHHHHHHHHHHHcCCeEEE
Confidence 44445444332 566677777889999999999999999999999976554
No 473
>PRK00278 trpC indole-3-glycerol-phosphate synthase; Reviewed
Probab=31.39 E-value=1.2e+02 Score=26.92 Aligned_cols=51 Identities=18% Similarity=0.291 Sum_probs=35.6
Q ss_pred CCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcc
Q 014603 167 KGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADE 223 (422)
Q Consensus 167 ~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~ 223 (422)
.++-.++.++.+...-+-.++.+.. ..++.++++++++.|++.|+-+++|-
T Consensus 117 kdfi~~~~qi~~a~~~GAD~VlLi~------~~l~~~~l~~li~~a~~lGl~~lvev 167 (260)
T PRK00278 117 KDFIIDPYQIYEARAAGADAILLIV------AALDDEQLKELLDYAHSLGLDVLVEV 167 (260)
T ss_pred eeecCCHHHHHHHHHcCCCEEEEEe------ccCCHHHHHHHHHHHHHcCCeEEEEe
Confidence 3466777777776665555554422 22344789999999999999988873
No 474
>cd04751 Commd3 COMM_Domain containing protein 3. The COMM Domain is found at the C-terminus of a variety of proteins; presumably all COMM_Domain containing proteins are located in the nucleus and the COMM domain plays a role in protein-protein interactions. Several family members have been shown to bind and inhibit NF-kappaB.
Probab=31.05 E-value=75 Score=23.24 Aligned_cols=27 Identities=19% Similarity=0.283 Sum_probs=23.5
Q ss_pred EEEeccChHHHHHHHHHHHHHHHHhcc
Q 014603 394 RITFAVEPSALEDGLGRMKAFYDRHAK 420 (422)
Q Consensus 394 Ris~~~~~~~l~~~~~~l~~~~~~~~~ 420 (422)
++.|.++.+++..++..|+++.+.+.+
T Consensus 66 ~i~f~c~~e~L~~Li~~Lk~A~~~~e~ 92 (95)
T cd04751 66 DINFTCTLEQLQDLVNKLKDAAKNIER 92 (95)
T ss_pred eEEEEeCHHHHHHHHHHHHHHHHHHHH
Confidence 777889999999999999999887643
No 475
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=30.80 E-value=4.1e+02 Score=24.06 Aligned_cols=99 Identities=17% Similarity=0.111 Sum_probs=53.2
Q ss_pred cCHHHHHHhhcC-CceEEEEeCC-CCCcccccCH--------HHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccc
Q 014603 171 VDLDAVEALADE-NTVALVIINP-GNPCGNVYTY--------QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGV 240 (422)
Q Consensus 171 ~d~~~l~~~~~~-~~~~i~i~~p-~nptG~~~~~--------~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~ 240 (422)
.|++.+.+.+++ ++.+|+-+-. ++.-..--.+ .--..|+++|++.|+.+|.=. ..+.|+|....+..+
T Consensus 37 td~~~v~~~i~~~~PDvVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga~lVhiS--TDyVFDG~~~~~Y~E 114 (281)
T COG1091 37 TDPDAVLEVIRETRPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVGARLVHIS--TDYVFDGEKGGPYKE 114 (281)
T ss_pred cChHHHHHHHHhhCCCEEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHhCCeEEEee--cceEecCCCCCCCCC
Confidence 466777777754 4555554433 2333222211 124678999999999888422 334455654333333
Q ss_pred cCCCCCeEEEecCccccCC-------CC---ceeEEEEeeCC
Q 014603 241 FGSIVPVLTLGSISKRWIV-------PG---WRLGWLVTSDP 272 (422)
Q Consensus 241 ~~~~~~~i~i~s~sK~~~~-------~G---~r~G~~~~~~~ 272 (422)
-+...+ +-+.+-||..|= +. +|.+|+.+..+
T Consensus 115 ~D~~~P-~nvYG~sKl~GE~~v~~~~~~~~I~Rtswv~g~~g 155 (281)
T COG1091 115 TDTPNP-LNVYGRSKLAGEEAVRAAGPRHLILRTSWVYGEYG 155 (281)
T ss_pred CCCCCC-hhhhhHHHHHHHHHHHHhCCCEEEEEeeeeecCCC
Confidence 332222 335566776421 11 57888887643
No 476
>cd06563 GH20_chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This GH20 domain family includes an N-acetylglucosamidase (GlcNAcase A) from Pseudoalteromonas piscicida and an N-acetylhexosaminidase (SpHex) from Streptomyces plicatus. SpHex lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=30.59 E-value=60 Score=30.54 Aligned_cols=30 Identities=37% Similarity=0.568 Sum_probs=25.2
Q ss_pred CcccccCHHHHHHHHHHHHHcCcEEE--Eccc
Q 014603 195 PCGNVYTYQHLQKIAETAKKLGIMVI--ADEV 224 (422)
Q Consensus 195 ptG~~~~~~~l~~i~~~~~~~~~~li--~D~~ 224 (422)
+.|-.++.+++++|++.|+++|+-|| +|.-
T Consensus 78 ~~~~~YT~~di~eiv~yA~~rgI~VIPEID~P 109 (357)
T cd06563 78 PYGGFYTQEEIREIVAYAAERGITVIPEIDMP 109 (357)
T ss_pred ccCceECHHHHHHHHHHHHHcCCEEEEecCCc
Confidence 45678999999999999999999888 4543
No 477
>COG2185 Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism]
Probab=30.34 E-value=2.7e+02 Score=22.20 Aligned_cols=72 Identities=17% Similarity=0.296 Sum_probs=46.3
Q ss_pred CEEEecCCCccch-------HHHHhhCCCeEEEeeccCCCCcccCHH-HHHHhhcCCceEEEEeCCCCCcccccCHHHHH
Q 014603 135 ANILLPRPGFPYY-------EARATHSHLEVRHFDLLPAKGWEVDLD-AVEALADENTVALVIINPGNPCGNVYTYQHLQ 206 (422)
Q Consensus 135 d~Vl~~~~~~~~~-------~~~~~~~g~~~~~~~~~~~~~~~~d~~-~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~ 206 (422)
-+|++..+...+. ...++..|++++..++.. .++ .+.+++.....++.+|.-+ .+.. +...
T Consensus 13 prvlvak~GlDgHd~gakvia~~l~d~GfeVi~~g~~~------tp~e~v~aA~~~dv~vIgvSsl~--g~h~---~l~~ 81 (143)
T COG2185 13 PRVLVAKLGLDGHDRGAKVIARALADAGFEVINLGLFQ------TPEEAVRAAVEEDVDVIGVSSLD--GGHL---TLVP 81 (143)
T ss_pred ceEEEeccCccccccchHHHHHHHHhCCceEEecCCcC------CHHHHHHHHHhcCCCEEEEEecc--chHH---HHHH
Confidence 5777777665433 455666788888776543 334 4455667677777666543 1222 6789
Q ss_pred HHHHHHHHcCc
Q 014603 207 KIAETAKKLGI 217 (422)
Q Consensus 207 ~i~~~~~~~~~ 217 (422)
++.+.++++|.
T Consensus 82 ~lve~lre~G~ 92 (143)
T COG2185 82 GLVEALREAGV 92 (143)
T ss_pred HHHHHHHHhCC
Confidence 99999999865
No 478
>COG0505 CarA Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism / Nucleotide transport and metabolism]
Probab=30.31 E-value=1.8e+02 Score=27.07 Aligned_cols=70 Identities=17% Similarity=0.190 Sum_probs=44.8
Q ss_pred CCCEEEecCCCcc-chHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCC-CCCcccccCHHHHHHHHH
Q 014603 133 PGANILLPRPGFP-YYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINP-GNPCGNVYTYQHLQKIAE 210 (422)
Q Consensus 133 ~gd~Vl~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p-~nptG~~~~~~~l~~i~~ 210 (422)
++.+|++.+.+.. ++...+...|+.+..+|.+ .+.+++.+. ++..++++|. .+|.-.. ..+..|.+
T Consensus 178 ~~~~Vv~iD~GvK~nIlr~L~~rg~~vtVVP~~------t~~eeIl~~---~pDGiflSNGPGDP~~~~---~~i~~ik~ 245 (368)
T COG0505 178 PGKHVVVIDFGVKRNILRELVKRGCRVTVVPAD------TSAEEILAL---NPDGIFLSNGPGDPAPLD---YAIETIKE 245 (368)
T ss_pred CCcEEEEEEcCccHHHHHHHHHCCCeEEEEcCC------CCHHHHHhh---CCCEEEEeCCCCChhHHH---HHHHHHHH
Confidence 3457777776663 6677777789998888753 456665443 6778988865 7784433 34555555
Q ss_pred HHHH
Q 014603 211 TAKK 214 (422)
Q Consensus 211 ~~~~ 214 (422)
+...
T Consensus 246 l~~~ 249 (368)
T COG0505 246 LLGT 249 (368)
T ss_pred Hhcc
Confidence 4443
No 479
>TIGR03271 methan_mark_5 putative methanogenesis marker protein 5. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=30.25 E-value=1.6e+02 Score=22.96 Aligned_cols=41 Identities=12% Similarity=0.241 Sum_probs=31.2
Q ss_pred HHHHHHHHHHhcCeEEecCCCCCCCCeEEEEeccChHHHHHHHHHHHHHHHH
Q 014603 366 DMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALEDGLGRMKAFYDR 417 (422)
Q Consensus 366 ~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~l~~~~~~l~~~~~~ 417 (422)
..++...+.++++|.+ +.+-+..++++...++++|.++++.
T Consensus 101 tnEL~~~lir~k~iPi-----------LEl~YP~~~e~~~~~V~~i~~FL~~ 141 (142)
T TIGR03271 101 TNELTVFLVRRKDIPI-----------LELDYPTSEEEGIIFVRKINDFLDS 141 (142)
T ss_pred HHHHHHHHHhhcCCce-----------EEeeCCCChhHHHHHHHHHHHHHhc
Confidence 4556666667767665 4666777889999999999999875
No 480
>PF02702 KdpD: Osmosensitive K+ channel His kinase sensor domain; InterPro: IPR003852 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. Signal transducing histidine kinases are the key elements in two-component signal transduction systems, which control complex processes such as the initiation of development in microorganisms [, ]. Examples of histidine kinases are EnvZ, which plays a central role in osmoregulation [], and CheA, which plays a central role in the chemotaxis system []. Histidine kinases usually have an N-terminal ligand-binding domain and a C-terminal kinase domain, but other domains may also be present. The kinase domain is responsible for the autophosphorylation of the histidine with ATP, the phosphotransfer from the kinase to an aspartate of the response regulator, and (with bifunctional enzymes) the phosphotransfer from aspartyl phosphate back to ADP or to water []. The kinase core has a unique fold, distinct from that of the Ser/Thr/Tyr kinase superfamily. HKs can be roughly divided into two classes: orthodox and hybrid kinases [, ]. Most orthodox HKs, typified by the Escherichia coli EnvZ protein, function as periplasmic membrane receptors and have a signal peptide and transmembrane segment(s) that separate the protein into a periplasmic N-terminal sensing domain and a highly conserved cytoplasmic C-terminal kinase core. Members of this family, however, have an integral membrane sensor domain. Not all orthodox kinases are membrane bound, e.g., the nitrogen regulatory kinase NtrB (GlnL) is a soluble cytoplasmic HK []. Hybrid kinases contain multiple phosphodonor and phosphoacceptor sites and use multi-step phospho-relay schemes instead of promoting a single phosphoryl transfer. In addition to the sensor domain and kinase core, they contain a CheY-like receiver domain and a His-containing phosphotransfer (HPt) domain. This entry represents the N-terminal domain found in KdpD sensor kinase proteins, which regulate the kdpFABC operon responsible for potassium transport []. The N-terminal domain forms part of the cytoplasmic region of the protein, which may be the sensor domain responsible for sensing turgor pressure [].; GO: 0000155 two-component sensor activity, 0004673 protein histidine kinase activity, 0000160 two-component signal transduction system (phosphorelay), 0016020 membrane; PDB: 2R8R_B.
Probab=30.17 E-value=1.6e+02 Score=25.09 Aligned_cols=99 Identities=23% Similarity=0.215 Sum_probs=44.9
Q ss_pred cCHHHHHHHHHHHhcCCCCEEEe-cCCCccchHHHHhhCCCeEEEeeccCCCC---cccCHHHHHHhhcCCceEEEEeCC
Q 014603 117 LGCTQAIEVILTVLARPGANILL-PRPGFPYYEARATHSHLEVRHFDLLPAKG---WEVDLDAVEALADENTVALVIINP 192 (422)
Q Consensus 117 ~g~~~a~~~~~~~l~~~gd~Vl~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~d~~~l~~~~~~~~~~i~i~~p 192 (422)
.|-|-+|-.-.+.+.+.|--|++ .--.|..-...+...|.+..+.......+ ..+|++.+. ..++.++++-.-
T Consensus 16 VGKTy~ML~ea~~l~~~G~DVViG~vethgR~et~~l~~gLe~iP~~~i~y~g~~~~E~DldaiL---~R~P~vvLVDEL 92 (211)
T PF02702_consen 16 VGKTYAMLQEAHRLKEQGVDVVIGYVETHGRPETEALLEGLEVIPRKKIEYRGRTLEEMDLDAIL---ARRPQVVLVDEL 92 (211)
T ss_dssp SSHHHHHHHHHHHHHHTT--EEEEE---TT-HHHHHHHCTS-B---EEEEETTEEEEE--HHHHH---HH--SEEEES-T
T ss_pred CCHHHHHHHHHHHHHHCCCCEEEEEecCCCcHHHHHHHcCCCcCCCeeEeeCCEecccCCHHHHH---hcCCCEEEeCcc
Confidence 45688888888888888854444 33334333334444565543222111111 245666554 446666665543
Q ss_pred --CCCcccccCHHHHHHHHHHHHHcCcEEE
Q 014603 193 --GNPCGNVYTYQHLQKIAETAKKLGIMVI 220 (422)
Q Consensus 193 --~nptG~~~~~~~l~~i~~~~~~~~~~li 220 (422)
.|+.|..-. ..|+.+-++... |+-|+
T Consensus 93 AHtN~pgsr~~-kR~qDVeeLL~a-GIdV~ 120 (211)
T PF02702_consen 93 AHTNAPGSRHK-KRYQDVEELLDA-GIDVY 120 (211)
T ss_dssp T-B--TT-SSS-BHHHHHHHHHHT-T-EEE
T ss_pred cccCCCCCCCc-ccHHhHHHHHHC-CCeEE
Confidence 577776422 567777776654 87765
No 481
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=29.89 E-value=1e+02 Score=23.47 Aligned_cols=43 Identities=21% Similarity=0.248 Sum_probs=24.6
Q ss_pred HHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccc
Q 014603 173 LDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVY 225 (422)
Q Consensus 173 ~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~ 225 (422)
++.+++....+.+.+++... .+-+++.++|+++|+.++-..+.
T Consensus 69 ~~~v~~~~~~g~~~v~~~~g----------~~~~~~~~~a~~~gi~vigp~C~ 111 (116)
T PF13380_consen 69 PEIVDEAAALGVKAVWLQPG----------AESEELIEAAREAGIRVIGPNCL 111 (116)
T ss_dssp HHHHHHHHHHT-SEEEE-TT----------S--HHHHHHHHHTT-EEEESS-H
T ss_pred HHHHHHHHHcCCCEEEEEcc----------hHHHHHHHHHHHcCCEEEeCCcc
Confidence 34455555556676665433 34577888888999998866654
No 482
>TIGR01060 eno phosphopyruvate hydratase. Alternate name: enolase
Probab=29.87 E-value=1.6e+02 Score=28.41 Aligned_cols=92 Identities=12% Similarity=0.121 Sum_probs=52.0
Q ss_pred HHHHHHHHHhcCCCCEEEecCCCccc----hHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCc
Q 014603 121 QAIEVILTVLARPGANILLPRPGFPY----YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPC 196 (422)
Q Consensus 121 ~a~~~~~~~l~~~gd~Vl~~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~npt 196 (422)
+++..+-. ++++-+-+++++|.... +....+..+-. +|+...+.+..+++.+++.+..+..-++..-++. .
T Consensus 266 eai~~~~~-lle~~~i~~iEdPl~~~D~~~~~~L~~~~~~~---ipI~gDE~~~t~~~~~~~~i~~~a~d~v~ik~~~-i 340 (425)
T TIGR01060 266 EMIEYYKE-LVEKYPIVSIEDGLSEEDWEGWAELTKELGDK---VQIVGDDLFVTNTEILREGIEMGVANSILIKPNQ-I 340 (425)
T ss_pred HHHHHHHH-HHhcCCcEEEEcCCCcccHHHHHHHHHhcCCC---CeEEeCCCcccCHHHHHHHHHhCCCCEEEecccc-c
Confidence 44544332 33334577889988643 22332333212 2221222222368888888776544455556655 4
Q ss_pred ccccCHHHHHHHHHHHHHcCcEEE
Q 014603 197 GNVYTYQHLQKIAETAKKLGIMVI 220 (422)
Q Consensus 197 G~~~~~~~l~~i~~~~~~~~~~li 220 (422)
|.+ .+..+++++|+.+|+.++
T Consensus 341 GGI---tea~~ia~lA~~~Gi~~v 361 (425)
T TIGR01060 341 GTL---TETLDAVELAKKAGYTAV 361 (425)
T ss_pred CCH---HHHHHHHHHHHHcCCcEE
Confidence 444 478899999999999755
No 483
>COG0074 SucD Succinyl-CoA synthetase, alpha subunit [Energy production and conversion]
Probab=29.75 E-value=3.1e+02 Score=24.76 Aligned_cols=81 Identities=19% Similarity=0.224 Sum_probs=53.2
Q ss_pred CEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHH
Q 014603 135 ANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKK 214 (422)
Q Consensus 135 d~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~ 214 (422)
...+.-.|-|.....+.+..+++...+-+.+. +-.|.+.++++...+.+++..-+ .|..|.-++.+.+++
T Consensus 45 G~~~~g~PVf~tV~EA~~~~~a~~svI~Vp~~----~aadai~EAida~i~liv~ITEg------IP~~D~~~~~~~a~~ 114 (293)
T COG0074 45 GQTILGLPVFNTVEEAVKETGANASVIFVPPP----FAADAILEAIDAGIKLVVIITEG------IPVLDMLELKRYARE 114 (293)
T ss_pred ceEEcCccHHHHHHHHHHhhCCCEEEEecCcH----HHHHHHHHHHhCCCcEEEEEeCC------CCHHHHHHHHHHHHh
Confidence 35555577777777777777766544443222 34567777777777666655433 344788899999999
Q ss_pred cCcEEEEcccc
Q 014603 215 LGIMVIADEVY 225 (422)
Q Consensus 215 ~~~~li~D~~~ 225 (422)
.++.+|==++-
T Consensus 115 ~g~~iiGPncp 125 (293)
T COG0074 115 KGTRLIGPNCP 125 (293)
T ss_pred cCCEEECCCCC
Confidence 99888744443
No 484
>PRK06512 thiamine-phosphate pyrophosphorylase; Provisional
Probab=29.71 E-value=1.2e+02 Score=26.23 Aligned_cols=50 Identities=8% Similarity=0.114 Sum_probs=33.3
Q ss_pred HHHHHHhhcCC-ceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEccc
Q 014603 173 LDAVEALADEN-TVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEV 224 (422)
Q Consensus 173 ~~~l~~~~~~~-~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~ 224 (422)
++.+++.+..+ ...+.+=..+-+..... +..+++.++|+++|+.+|+++-
T Consensus 29 ~~~l~~al~~G~v~~vQlR~K~l~~~~~~--~~a~~l~~l~~~~gv~liINd~ 79 (221)
T PRK06512 29 AKLLRAALQGGDVASVILPQYGLDEATFQ--KQAEKLVPVIQEAGAAALIAGD 79 (221)
T ss_pred HHHHHHHHcCCCccEEEEeCCCCCHHHHH--HHHHHHHHHHHHhCCEEEEeCH
Confidence 45667777777 46666655554332221 3467888999999999988764
No 485
>PRK15452 putative protease; Provisional
Probab=29.46 E-value=1.5e+02 Score=28.83 Aligned_cols=44 Identities=9% Similarity=-0.084 Sum_probs=21.6
Q ss_pred EEEecCCCccchHHHHhhCCCeEEEeeccCCC----CcccCHHHHHHhh
Q 014603 136 NILLPRPGFPYYEARATHSHLEVRHFDLLPAK----GWEVDLDAVEALA 180 (422)
Q Consensus 136 ~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~----~~~~d~~~l~~~~ 180 (422)
+++++...... ...+...|+..+++...... ...++.+++++.+
T Consensus 5 eLlapag~~e~-l~aAi~~GADaVY~G~~~~~~R~~~~~f~~edl~eav 52 (443)
T PRK15452 5 ELLSPAGTLKN-MRYAFAYGADAVYAGQPRYSLRVRNNEFNHENLALGI 52 (443)
T ss_pred EEEEECCCHHH-HHHHHHCCCCEEEECCCccchhhhccCCCHHHHHHHH
Confidence 44455444433 33445568777777543111 0124556666644
No 486
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=29.42 E-value=3.7e+02 Score=25.87 Aligned_cols=89 Identities=17% Similarity=0.198 Sum_probs=52.0
Q ss_pred CHHHHHHHHHHHhcCCC-CEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCc
Q 014603 118 GCTQAIEVILTVLARPG-ANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPC 196 (422)
Q Consensus 118 g~~~a~~~~~~~l~~~g-d~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~npt 196 (422)
|+.+-...++..|.+.| ..|.+.+=++..-...++.+|..+. .++++.+.+.+- .+++ +..+.|+
T Consensus 185 GAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~------------~l~el~~~l~~~-DvVi-ssTsa~~ 250 (414)
T COG0373 185 GAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAV------------ALEELLEALAEA-DVVI-SSTSAPH 250 (414)
T ss_pred cccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeee------------cHHHHHHhhhhC-CEEE-EecCCCc
Confidence 44555666677787777 7888888788766777777774432 445666655532 3333 3222222
Q ss_pred ccccCHHHHHHHHHHHHHcCcEEEEccc
Q 014603 197 GNVYTYQHLQKIAETAKKLGIMVIADEV 224 (422)
Q Consensus 197 G~~~~~~~l~~i~~~~~~~~~~li~D~~ 224 (422)
.+++.+.++...+.- .+ ++++|=+
T Consensus 251 -~ii~~~~ve~a~~~r--~~-~livDia 274 (414)
T COG0373 251 -PIITREMVERALKIR--KR-LLIVDIA 274 (414)
T ss_pred -cccCHHHHHHHHhcc--cC-eEEEEec
Confidence 235556666665422 23 8888854
No 487
>PF04748 Polysacc_deac_2: Divergent polysaccharide deacetylase; InterPro: IPR006837 This is a family of uncharacterised proteins that includes YibQ.; PDB: 2QV5_A 2NLY_A.
Probab=29.40 E-value=3.7e+02 Score=23.12 Aligned_cols=120 Identities=16% Similarity=0.132 Sum_probs=59.5
Q ss_pred CHHHHHHHHHHHhhcCCCCCCCCCEE--Eec---CHHHHHHHHHHHhcCCCCEEEecCC--CccchHHHHhhCCCeEEEe
Q 014603 89 ILPARRAIADYLNRDLPYKLSPDDVY--LTL---GCTQAIEVILTVLARPGANILLPRP--GFPYYEARATHSHLEVRHF 161 (422)
Q Consensus 89 ~~~lr~~ia~~l~~~~~~~~~~~~i~--~~~---g~~~a~~~~~~~l~~~gd~Vl~~~~--~~~~~~~~~~~~g~~~~~~ 161 (422)
-.++++.+...+.+.-+ ...+. .++ ....++..++..+.+.|- ..+.+- ...-....++..|+.....
T Consensus 73 ~~~i~~~l~~al~~vp~----a~GvnNhmGS~~T~~~~~m~~vl~~l~~~gl-~FvDS~T~~~s~a~~~A~~~gvp~~~r 147 (213)
T PF04748_consen 73 EEEIRKRLEAALARVPG----AVGVNNHMGSRFTSDREAMRWVLEVLKERGL-FFVDSRTTPRSVAPQVAKELGVPAARR 147 (213)
T ss_dssp HHHHHHHHHHHHCCSTT-----SEEEEEE-CCHHC-HHHHHHHHHHHHHTT--EEEE-S--TT-SHHHHHHHCT--EEE-
T ss_pred HHHHHHHHHHHHHHCCC----cEEEecCCCccccCCHHHHHHHHHHHHHcCC-EEEeCCCCcccHHHHHHHHcCCCEEee
Confidence 45677777777754211 11121 222 234566667777766643 333222 2233467778888876544
Q ss_pred eccCCCCcccCHHHHHHhh-------cCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEE
Q 014603 162 DLLPAKGWEVDLDAVEALA-------DENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVI 220 (422)
Q Consensus 162 ~~~~~~~~~~d~~~l~~~~-------~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li 220 (422)
.+.-++. .+.+.+++.+ +++-.+|.|.+|+-.| .+-+++...-.++.|+-++
T Consensus 148 dvfLD~~--~~~~~I~~ql~~~~~~A~~~G~aI~Igh~~p~T-----l~~L~~~~~~l~~~gi~lV 206 (213)
T PF04748_consen 148 DVFLDND--QDEAAIRRQLDQAARIARKQGSAIAIGHPRPET-----LEALEEWLPELEAQGIELV 206 (213)
T ss_dssp SEETTST---SHHHHHHHHHHHHHHHHCCSEEEEEEE-SCCH-----HHHHHHHHHHHHHCTEEE-
T ss_pred ceecCCC--CCHHHHHHHHHHHHHhhhhcCcEEEEEcCCHHH-----HHHHHHHHhHHhhCCEEEE
Confidence 4432222 4655554433 3467788888887542 2456666665556677665
No 488
>PF03460 NIR_SIR_ferr: Nitrite/Sulfite reductase ferredoxin-like half domain; InterPro: IPR005117 Sulphite reductases (SiRs) and related nitrite reductases (NiRs) catalyse the six-electron reduction reactions of sulphite to sulphide, and nitrite to ammonia, respectively. The Escherichia coli SiR enzyme is a complex composed of two proteins, a flavoprotein alpha-component (SiR-FP) and a hemoprotein beta-component (SiR-HP), and has an alpha(8)beta(4) quaternary structure []. SiR-FP contains both FAD and FMN, while SiR-HP contains a Fe(4)S(4) cluster coupled to a sirohaem through a cysteine bridge. Electrons are transferred from NADPH to FAD, and on to FMN in SiR-FP, from which they are transferred to the metal centre of SiR-HP, where they reduce the siroheme-bound sulphite. SiR-HP has a two-fold symmetry, which generates a distinctive three-domain alpha/beta fold that controls assembly and reactivity []. This entry describes the ferrodoxin-like (alpha/beta sandwich) domain, which consists of a duplication containing two subdomains of this fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3B0H_A 4GEP_A 2GEP_A 2AOP_A 5AOP_A 6GEP_A 4AOP_A 1AOP_A 3AOP_A 8GEP_A ....
Probab=29.37 E-value=46 Score=22.37 Aligned_cols=25 Identities=32% Similarity=0.513 Sum_probs=19.3
Q ss_pred CCCCCcccccCHHHHHHHHHHHHHcC
Q 014603 191 NPGNPCGNVYTYQHLQKIAETAKKLG 216 (422)
Q Consensus 191 ~p~nptG~~~~~~~l~~i~~~~~~~~ 216 (422)
.+.-|.|.+ +.+.+..|++++++||
T Consensus 13 ~~~~~~G~i-~~~~l~~la~ia~~yg 37 (69)
T PF03460_consen 13 RIRIPGGRI-SAEQLRALAEIAEKYG 37 (69)
T ss_dssp EEB-GGGEE-EHHHHHHHHHHHHHHS
T ss_pred EEeCCCEEE-CHHHHHHHHHHHHHhC
Confidence 344466776 7799999999999986
No 489
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=29.03 E-value=63 Score=31.82 Aligned_cols=31 Identities=32% Similarity=0.415 Sum_probs=26.6
Q ss_pred cccccCHHHHHHHHHHHHHcCcEEEEcccccccc
Q 014603 196 CGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLA 229 (422)
Q Consensus 196 tG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~ 229 (422)
.|+. ++++++++.|+++|+.||+|-+.-...
T Consensus 77 fGt~---~dl~~Li~~~H~~Gi~vi~D~V~NH~~ 107 (479)
T PRK09441 77 YGTK---EELLNAIDALHENGIKVYADVVLNHKA 107 (479)
T ss_pred cCCH---HHHHHHHHHHHHCCCEEEEEECccccc
Confidence 4544 899999999999999999999976654
No 490
>PF02581 TMP-TENI: Thiamine monophosphate synthase/TENI; InterPro: IPR003733 Thiamine monophosphate synthase (TMP) (2.5.1.3 from EC) catalyzes the substitution of the pyrophosphate of 2-methyl-4-amino-5- hydroxymethylpyrimidine pyrophosphate by 4-methyl-5- (beta-hydroxyethyl)thiazole phosphate to yield thiamine phosphate in the thiamine biosynthesis pathway []. TENI, a protein from Bacillus subtilis that regulates the production of several extracellular enzymes by reducing alkaline protease production belongs to this group [].; GO: 0004789 thiamine-phosphate diphosphorylase activity, 0009228 thiamine biosynthetic process; PDB: 3NL5_A 3NL2_A 3NM1_A 3NM3_C 3NL6_B 3NL3_A 3CEU_A 3O63_B 3QH2_C 1YAD_D ....
Probab=28.54 E-value=87 Score=25.99 Aligned_cols=51 Identities=16% Similarity=0.206 Sum_probs=33.2
Q ss_pred CHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEccc
Q 014603 172 DLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEV 224 (422)
Q Consensus 172 d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~ 224 (422)
.++.+++.++.+...+.+=.+..+..... +..+++.++|+++++.+++++-
T Consensus 14 ~~~~l~~~~~~gv~~v~lR~k~~~~~~~~--~~a~~l~~~~~~~~~~liin~~ 64 (180)
T PF02581_consen 14 FLEQLEAALAAGVDLVQLREKDLSDEELL--ELARRLAELCQKYGVPLIINDR 64 (180)
T ss_dssp HHHHHHHHHHTT-SEEEEE-SSS-HHHHH--HHHHHHHHHHHHTTGCEEEES-
T ss_pred HHHHHHHHHHCCCcEEEEcCCCCCccHHH--HHHHHHHHHhhcceEEEEecCC
Confidence 34566677777777777777754444332 5578899999999988887663
No 491
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=28.17 E-value=4.2e+02 Score=23.42 Aligned_cols=98 Identities=18% Similarity=0.227 Sum_probs=49.2
Q ss_pred CCCCEEEecCHHHHHHHHHHHhcCCC-------------------CEEEecCCCccch--HHHHhhCCCeEEEeeccCCC
Q 014603 109 SPDDVYLTLGCTQAIEVILTVLARPG-------------------ANILLPRPGFPYY--EARATHSHLEVRHFDLLPAK 167 (422)
Q Consensus 109 ~~~~i~~~~g~~~a~~~~~~~l~~~g-------------------d~Vl~~~~~~~~~--~~~~~~~g~~~~~~~~~~~~ 167 (422)
....|++|.|....-...- ....+ ..++...+-|.-- ....+.+++.+.... ..+
T Consensus 129 ~~~~iflttGsk~L~~f~~--~~~~~~r~~~RvLp~~~~~~g~~~~~iia~~GPfs~e~n~al~~~~~i~~lVtK--~SG 204 (249)
T PF02571_consen 129 GGGRIFLTTGSKNLPPFVP--APLPGERLFARVLPTPESALGFPPKNIIAMQGPFSKELNRALFRQYGIDVLVTK--ESG 204 (249)
T ss_pred CCCCEEEeCchhhHHHHhh--cccCCCEEEEEECCCccccCCCChhhEEEEeCCCCHHHHHHHHHHcCCCEEEEc--CCC
Confidence 4478999999775544322 11122 2333333333211 334444555554332 122
Q ss_pred CcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHH
Q 014603 168 GWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETA 212 (422)
Q Consensus 168 ~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~ 212 (422)
+- -..+.++.+..-+..++++.-|.-|.|... .+.++++.+++
T Consensus 205 ~~-g~~eKi~AA~~lgi~vivI~RP~~~~~~~~-~~~~~e~l~~l 247 (249)
T PF02571_consen 205 GS-GFDEKIEAARELGIPVIVIKRPPEPYGDPV-VETIEELLDWL 247 (249)
T ss_pred ch-hhHHHHHHHHHcCCeEEEEeCCCCCCCCcc-cCCHHHHHHHH
Confidence 22 344666666666777888888865544432 13455555544
No 492
>COG0400 Predicted esterase [General function prediction only]
Probab=28.15 E-value=3.8e+02 Score=22.92 Aligned_cols=104 Identities=13% Similarity=-0.020 Sum_probs=53.8
Q ss_pred CCCCCCEEEecCHHHHHHHHHHHhcCCC--CEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccC---HHHHHHhhc
Q 014603 107 KLSPDDVYLTLGCTQAIEVILTVLARPG--ANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVD---LDAVEALAD 181 (422)
Q Consensus 107 ~~~~~~i~~~~g~~~a~~~~~~~l~~~g--d~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d---~~~l~~~~~ 181 (422)
+++.+++++..=++.|+-++-..+..++ +.++..++.++.............+.+..-..+. -+. .+++.+.+.
T Consensus 95 gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~~~~~~~~~pill~hG~~Dp-vvp~~~~~~l~~~l~ 173 (207)
T COG0400 95 GIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPELLPDLAGTPILLSHGTEDP-VVPLALAEALAEYLT 173 (207)
T ss_pred CCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCccccccCCCeEEEeccCcCC-ccCHHHHHHHHHHHH
Confidence 5667888876666666665555555554 6777777777544322222222222222211111 112 233444443
Q ss_pred C-CceEEEEeCCCCCcccccCHHHHHHHHHHHHH
Q 014603 182 E-NTVALVIINPGNPCGNVYTYQHLQKIAETAKK 214 (422)
Q Consensus 182 ~-~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~ 214 (422)
+ +..+-+-. . +.|-.++.++++++.++..+
T Consensus 174 ~~g~~v~~~~--~-~~GH~i~~e~~~~~~~wl~~ 204 (207)
T COG0400 174 ASGADVEVRW--H-EGGHEIPPEELEAARSWLAN 204 (207)
T ss_pred HcCCCEEEEE--e-cCCCcCCHHHHHHHHHHHHh
Confidence 3 22222211 2 37888888999999887764
No 493
>TIGR00511 ribulose_e2b2 ribose-1,5-bisphosphate isomerase, e2b2 family. The delineation of this family was based originally, in part, on a discussion and neighbor-joining phylogenetic study by Kyrpides and Woese of archaeal and other proteins homologous to the alpha, beta, and delta subunits of eukaryotic initiation factor 2B (eIF-2B), a five-subunit molecule that catalyzes GTP recycling for eIF-2. Recently, Sato, et al. assigned the function ribulose-1,5 bisphosphate isomerase.
Probab=28.14 E-value=4.7e+02 Score=23.92 Aligned_cols=116 Identities=16% Similarity=0.163 Sum_probs=54.9
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCC--CEEEec--CCCccchH--HHHhhCCCeEEEeecc
Q 014603 91 PARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPG--ANILLP--RPGFPYYE--ARATHSHLEVRHFDLL 164 (422)
Q Consensus 91 ~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g--d~Vl~~--~~~~~~~~--~~~~~~g~~~~~~~~~ 164 (422)
..++.|+++-... +....+++|.|-+.....++....+.| -+|++. .|.+.+.. ..+...|+++..++
T Consensus 100 ~a~~~I~~~a~~~----i~~g~~ILT~~~S~tv~~~l~~a~~~~~~f~V~v~EsrP~~~G~~~a~~L~~~gI~vtlI~-- 173 (301)
T TIGR00511 100 KAQERIGEIGAKR----IRDGDVVMTHCNSEAALSVIKTAFEQGKDIEVIATETRPRKQGHITAKELRDYGIPVTLIV-- 173 (301)
T ss_pred HHHHHHHHHHHHH----cCCCCEEEEECCcHHHHHHHHHHHHcCCcEEEEEecCCCcchHHHHHHHHHHCCCCEEEEe--
Confidence 3444555544332 234467777665544444444443333 355554 45555532 22233566666553
Q ss_pred CCCCcccCHHHHHHhhcCCceEEEE-eCCCCCcccccCHHHHHHHHHHHHHcCcEEEE
Q 014603 165 PAKGWEVDLDAVEALADENTVALVI-INPGNPCGNVYTYQHLQKIAETAKKLGIMVIA 221 (422)
Q Consensus 165 ~~~~~~~d~~~l~~~~~~~~~~i~i-~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 221 (422)
| ..+-..+.+ ...+++ +..-...|.++.+-=-..++-.|+.+++.+++
T Consensus 174 -------D-sa~~~~m~~-vd~VivGad~v~~nG~v~nkiGT~~lA~~Ak~~~vPv~V 222 (301)
T TIGR00511 174 -------D-SAVRYFMKE-VDHVVVGADAITANGALINKIGTSQLALAAREARVPFMV 222 (301)
T ss_pred -------h-hHHHHHHHh-CCEEEECccEEecCCCEEEHHhHHHHHHHHHHhCCCEEE
Confidence 1 222223332 223322 22222334443333344566788899987775
No 494
>KOG0630 consensus Predicted pyridoxal-dependent decarboxylase [Amino acid transport and metabolism]
Probab=27.87 E-value=2.5e+02 Score=27.49 Aligned_cols=83 Identities=14% Similarity=0.180 Sum_probs=48.6
Q ss_pred EEEecCCCccch-HHHHhhCCCeEEEeeccCCC--C---cccCHHHHHHhhcC-----CceEEEEeCC-CCCcccccCHH
Q 014603 136 NILLPRPGFPYY-EARATHSHLEVRHFDLLPAK--G---WEVDLDAVEALADE-----NTVALVIINP-GNPCGNVYTYQ 203 (422)
Q Consensus 136 ~Vl~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~--~---~~~d~~~l~~~~~~-----~~~~i~i~~p-~nptG~~~~~~ 203 (422)
++.+....+.-. ...++.+|+....+...++. + ..+|.-.+++.+++ ++.++++... ..-.|.. +
T Consensus 233 t~YiS~alh~~l~hYaarefGIa~~aI~~~~dhdqgeiegriDhh~feKiideDlaagkkPLilia~iGasi~Gqn---D 309 (838)
T KOG0630|consen 233 TFYISEALHMDLLHYAAREFGIADEAIKPILDHDQGEIEGRIDHHLFEKIIDEDLAAGKKPLILIADIGASICGQN---D 309 (838)
T ss_pred eEEEcccccHHHHHHHHHHhCCchhheecccccccccccccccHHHHHHHHHHHHhCCCCCeEEEEeccchhhcch---H
Confidence 344444444322 34556678764433322221 1 35788788877654 4455555544 4566776 7
Q ss_pred HHHHHHHHHHHcC-cEEEE
Q 014603 204 HLQKIAETAKKLG-IMVIA 221 (422)
Q Consensus 204 ~l~~i~~~~~~~~-~~li~ 221 (422)
-+-+|.++|+.++ .++..
T Consensus 310 mi~kildi~eahakfWLHa 328 (838)
T KOG0630|consen 310 MILKILDICEAHAKFWLHA 328 (838)
T ss_pred HHHHHHHHHHHhhheeEee
Confidence 7999999999987 66654
No 495
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=27.72 E-value=2.4e+02 Score=20.45 Aligned_cols=68 Identities=18% Similarity=0.152 Sum_probs=40.8
Q ss_pred cchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEE
Q 014603 145 PYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIA 221 (422)
Q Consensus 145 ~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 221 (422)
..|...++..|.+.... ...++..-....|+..+.+-.-++++++..+ -+-...+.+.|+++|++++.
T Consensus 13 ~~~~~~~~~~G~~~~~h--g~~~~~~~~~~~l~~~i~~aD~VIv~t~~vs-------H~~~~~vk~~akk~~ip~~~ 80 (97)
T PF10087_consen 13 RRYKRILEKYGGKLIHH--GRDGGDEKKASRLPSKIKKADLVIVFTDYVS-------HNAMWKVKKAAKKYGIPIIY 80 (97)
T ss_pred HHHHHHHHHcCCEEEEE--ecCCCCccchhHHHHhcCCCCEEEEEeCCcC-------hHHHHHHHHHHHHcCCcEEE
Confidence 45677888889887776 2223322233347776653333334444322 14467888899999998874
No 496
>PF02639 DUF188: Uncharacterized BCR, YaiI/YqxD family COG1671; InterPro: IPR003791 This entry describes proteins of unknown function.
Probab=27.67 E-value=1.9e+02 Score=22.61 Aligned_cols=62 Identities=13% Similarity=0.148 Sum_probs=38.6
Q ss_pred CCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhh
Q 014603 111 DDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALA 180 (422)
Q Consensus 111 ~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~ 180 (422)
...+++..+.++-...+...+++||-|++.+ +..++.....+...+ ++ .+..++.+.+...+
T Consensus 29 ~~~i~Vd~g~DaaD~~I~~~~~~gDiVITqD-----igLA~~~l~Kga~vl--~~-rG~~yt~~nI~~~L 90 (130)
T PF02639_consen 29 VEMIVVDSGFDAADFYIVNHAKPGDIVITQD-----IGLASLLLAKGAYVL--NP-RGKEYTKENIDELL 90 (130)
T ss_pred eEEEEECCCCChHHHHHHHcCCCCCEEEECC-----HHHHHHHHHCCCEEE--CC-CCCCCCHHHHHHHH
Confidence 3567777777888877777888999999887 223333333222222 12 45566777776655
No 497
>PRK03906 mannonate dehydratase; Provisional
Probab=27.62 E-value=1.3e+02 Score=28.65 Aligned_cols=50 Identities=14% Similarity=0.207 Sum_probs=35.7
Q ss_pred CHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEE
Q 014603 172 DLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIA 221 (422)
Q Consensus 172 d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 221 (422)
|+..|...-+.+...|+-.-++-|.|.+++.++|.++.+.+.++|+-+=+
T Consensus 12 d~~~l~~~rQ~G~~~iv~~l~~~~~g~~W~~~~i~~~~~~ie~~Gl~~~v 61 (385)
T PRK03906 12 DPVTLEDIRQPGATGIVTALHDIPVGEVWPVEEILARKAEIEAAGLEWSV 61 (385)
T ss_pred CcchHHHHhcCCCCceeecCCCCCCCCCCCHHHHHHHHHHHHHcCCeEEE
Confidence 34444444344555555555677899999999999999999999876544
No 498
>PLN03244 alpha-amylase; Provisional
Probab=27.38 E-value=97 Score=32.37 Aligned_cols=30 Identities=27% Similarity=0.380 Sum_probs=26.5
Q ss_pred CHHHHHHHHHHHHHcCcEEEEccccccccc
Q 014603 201 TYQHLQKIAETAKKLGIMVIADEVYDHLAF 230 (422)
Q Consensus 201 ~~~~l~~i~~~~~~~~~~li~D~~~~~~~~ 230 (422)
++++++++++.|++.|+-||.|-++..+.-
T Consensus 439 TPeDLK~LVD~aH~~GI~VILDvV~NH~~~ 468 (872)
T PLN03244 439 TPDDFKRLVDEAHGLGLLVFLDIVHSYAAA 468 (872)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEecCccCCC
Confidence 459999999999999999999999976543
No 499
>PF02142 MGS: MGS-like domain This is a subfamily of this family; InterPro: IPR011607 This domain composes the whole protein of methylglyoxal synthetase and the domain is also found in carbamoyl phosphate synthetase (CPS) where it forms a regulatory domain that binds to the allosteric effector ornithine. The known structures in this domain show a common phosphate binding site []. ; PDB: 4A1O_A 3ZZM_A 1ZCZ_A 1M6V_C 1CS0_C 1C30_E 1C3O_G 1BXR_A 1T36_E 1A9X_A ....
Probab=27.15 E-value=1.6e+02 Score=21.35 Aligned_cols=44 Identities=20% Similarity=0.168 Sum_probs=26.8
Q ss_pred HHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEE
Q 014603 175 AVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVI 220 (422)
Q Consensus 175 ~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li 220 (422)
.+.+.+..+..-++++.|........ .+-..|.+.|.++|+.++
T Consensus 51 ~i~~~i~~~~IdlVIn~~~~~~~~~~--~dg~~irr~a~~~~Ip~~ 94 (95)
T PF02142_consen 51 QIMDLIKNGKIDLVINTPYPFSDQEH--TDGYKIRRAAVEYNIPLF 94 (95)
T ss_dssp HHHHHHHTTSEEEEEEE--THHHHHT--HHHHHHHHHHHHTTSHEE
T ss_pred HHHHHHHcCCeEEEEEeCCCCccccc--CCcHHHHHHHHHcCCCCc
Confidence 35555666666677777754222221 367788889999998765
No 500
>cd06564 GH20_DspB_LnbB-like Glycosyl hydrolase family 20 (GH20) catalytic domain of dispersin B (DspB), lacto-N-biosidase (LnbB) and related proteins. Dispersin B is a soluble beta-N-acetylglucosamidase found in bacteria that hydrolyzes the beta-1,6-linkages of PGA (poly-beta-(1,6)-N-acetylglucosamine), a major component of the extracellular polysaccharide matrix. Lacto-N-biosidase hydrolyzes lacto-N-biose (LNB) type I oligosaccharides at the nonreducing terminus to produce lacto-N-biose as part of the GNB/LNB (galacto-N-biose/lacto-N-biose I) degradation pathway. The lacto-N-biosidase from Bifidobacterium bifidum has this GH20 domain, a carbohydrate binding module 32, and a bacterial immunoglobulin-like domain 2, as well as a YSIRK signal peptide and a G5 membrane anchor at the N and C termini, respectively. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=26.77 E-value=70 Score=29.60 Aligned_cols=26 Identities=23% Similarity=0.405 Sum_probs=23.3
Q ss_pred CcccccCHHHHHHHHHHHHHcCcEEE
Q 014603 195 PCGNVYTYQHLQKIAETAKKLGIMVI 220 (422)
Q Consensus 195 ptG~~~~~~~l~~i~~~~~~~~~~li 220 (422)
+.+-.++++++++|++.|+++|+-||
T Consensus 74 ~~~~~YT~~di~eiv~yA~~rgI~vI 99 (326)
T cd06564 74 ANDGYYTKEEFKELIAYAKDRGVNII 99 (326)
T ss_pred CCCCcccHHHHHHHHHHHHHcCCeEe
Confidence 45668999999999999999999887
Done!