Query 014603
Match_columns 422
No_of_seqs 186 out of 2322
Neff 10.4
Searched_HMMs 29240
Date Mon Mar 25 14:32:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014603.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014603hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dyd_A Tyrosine aminotransfera 100.0 8.6E-54 2.9E-58 411.5 40.4 406 9-420 21-426 (427)
2 1bw0_A TAT, protein (tyrosine 100.0 9.5E-51 3.3E-55 389.5 43.2 403 11-420 3-415 (416)
3 1b5p_A Protein (aspartate amin 100.0 1.2E-50 4.2E-55 384.6 41.3 377 16-416 4-383 (385)
4 3aow_A Putative uncharacterize 100.0 1.8E-49 6.3E-54 383.0 40.1 383 9-420 47-447 (448)
5 1j32_A Aspartate aminotransfer 100.0 6.1E-49 2.1E-53 373.5 40.6 382 16-418 3-387 (388)
6 3h14_A Aminotransferase, class 100.0 3.2E-49 1.1E-53 375.8 38.6 379 15-422 4-386 (391)
7 3fvs_A Kynurenine--oxoglutarat 100.0 2.2E-49 7.6E-54 380.7 34.5 382 14-417 4-421 (422)
8 3ele_A Amino transferase; RER0 100.0 1.4E-48 4.8E-53 372.2 38.4 382 14-419 2-397 (398)
9 1gd9_A Aspartate aminotransfer 100.0 6E-48 2E-52 366.8 41.2 379 15-418 2-386 (389)
10 2x5d_A Probable aminotransfera 100.0 5.4E-48 1.8E-52 369.8 39.8 385 16-419 10-399 (412)
11 3jtx_A Aminotransferase; NP_28 100.0 6.7E-48 2.3E-52 367.3 38.9 372 17-415 3-395 (396)
12 1o4s_A Aspartate aminotransfer 100.0 2.4E-47 8.1E-52 362.5 40.1 372 16-416 14-387 (389)
13 1xi9_A Putative transaminase; 100.0 1.2E-47 4.1E-52 366.7 37.1 389 15-419 11-404 (406)
14 2o1b_A Aminotransferase, class 100.0 4E-48 1.4E-52 369.5 33.7 376 17-418 23-403 (404)
15 3e2y_A Kynurenine-oxoglutarate 100.0 3.4E-48 1.2E-52 371.1 32.8 375 17-413 2-408 (410)
16 3b46_A Aminotransferase BNA3; 100.0 8.2E-48 2.8E-52 372.0 35.2 376 23-413 33-442 (447)
17 2o0r_A RV0858C (N-succinyldiam 100.0 4.2E-47 1.4E-51 363.5 37.0 377 16-418 3-396 (411)
18 3dzz_A Putative pyridoxal 5'-p 100.0 1.3E-46 4.5E-51 357.7 39.0 357 43-419 25-390 (391)
19 3nra_A Aspartate aminotransfer 100.0 4.2E-47 1.4E-51 363.1 34.8 357 46-419 40-406 (407)
20 3fdb_A Beta C-S lyase, putativ 100.0 2E-47 6.9E-52 361.6 32.2 351 43-418 21-376 (377)
21 2r2n_A Kynurenine/alpha-aminoa 100.0 2.2E-46 7.6E-51 359.8 39.7 378 11-418 2-424 (425)
22 2dou_A Probable N-succinyldiam 100.0 5.6E-47 1.9E-51 358.4 34.6 349 43-415 23-375 (376)
23 1u08_A Hypothetical aminotrans 100.0 9.8E-47 3.4E-51 358.0 36.3 370 17-413 9-385 (386)
24 2z61_A Probable aspartate amin 100.0 6.7E-46 2.3E-50 350.2 40.9 364 16-416 2-369 (370)
25 3kax_A Aminotransferase, class 100.0 2.1E-46 7.3E-51 355.3 37.5 353 43-415 22-382 (383)
26 3qgu_A LL-diaminopimelate amin 100.0 5.2E-46 1.8E-50 360.0 40.9 385 14-418 37-440 (449)
27 2zc0_A Alanine glyoxylate tran 100.0 6.8E-46 2.3E-50 354.7 41.2 386 12-420 3-406 (407)
28 2gb3_A Aspartate aminotransfer 100.0 6.3E-46 2.2E-50 355.1 39.6 379 15-420 15-404 (409)
29 1yiz_A Kynurenine aminotransfe 100.0 5.9E-47 2E-51 364.6 32.6 382 14-416 13-427 (429)
30 1c7n_A Cystalysin; transferase 100.0 4.6E-46 1.6E-50 355.0 37.9 356 45-420 31-395 (399)
31 3tcm_A Alanine aminotransferas 100.0 4.5E-46 1.5E-50 363.9 38.5 370 46-421 65-497 (500)
32 3k7y_A Aspartate aminotransfer 100.0 1.5E-46 5E-51 356.2 33.5 369 18-417 6-404 (405)
33 1vp4_A Aminotransferase, putat 100.0 1.9E-46 6.6E-51 360.3 33.8 377 16-420 21-420 (425)
34 4dq6_A Putative pyridoxal phos 100.0 1.4E-45 4.9E-50 350.6 38.3 352 43-415 30-390 (391)
35 3ezs_A Aminotransferase ASPB; 100.0 1.7E-46 5.9E-51 355.1 31.3 359 23-418 4-375 (376)
36 2zyj_A Alpha-aminodipate amino 100.0 4.3E-46 1.5E-50 354.9 34.2 374 12-419 6-394 (397)
37 1d2f_A MALY protein; aminotran 100.0 2.5E-45 8.5E-50 348.8 38.5 353 45-418 28-389 (390)
38 1v2d_A Glutamine aminotransfer 100.0 9.4E-46 3.2E-50 350.7 35.1 364 15-420 2-373 (381)
39 3ei9_A LL-diaminopimelate amin 100.0 2.3E-45 7.9E-50 353.7 37.8 383 14-417 24-427 (432)
40 3l8a_A METC, putative aminotra 100.0 8E-46 2.7E-50 355.6 34.1 353 44-416 60-420 (421)
41 3g0t_A Putative aminotransfera 100.0 2.2E-45 7.6E-50 354.5 36.4 372 22-417 22-436 (437)
42 3ihj_A Alanine aminotransferas 100.0 1.1E-45 3.7E-50 360.5 34.1 369 46-421 64-496 (498)
43 4f4e_A Aromatic-amino-acid ami 100.0 7.2E-46 2.5E-50 355.8 31.1 372 14-415 22-419 (420)
44 3ffh_A Histidinol-phosphate am 100.0 2.2E-44 7.4E-49 339.0 38.2 333 43-414 30-362 (363)
45 3rq1_A Aminotransferase class 100.0 1.3E-44 4.6E-49 346.9 33.9 385 12-420 5-417 (418)
46 3t18_A Aminotransferase class 100.0 1.1E-44 3.7E-49 347.0 33.1 377 17-420 9-412 (413)
47 3asa_A LL-diaminopimelate amin 100.0 2.7E-44 9.3E-49 342.7 33.6 373 16-419 3-394 (400)
48 3piu_A 1-aminocyclopropane-1-c 100.0 7.6E-44 2.6E-48 343.4 36.2 362 43-419 36-433 (435)
49 2x5f_A Aspartate_tyrosine_phen 100.0 1.1E-44 3.8E-49 348.7 29.9 349 44-418 46-429 (430)
50 1iay_A ACC synthase 2, 1-amino 100.0 1.3E-43 4.3E-48 341.2 36.3 359 45-418 36-427 (428)
51 3fsl_A Aromatic-amino-acid ami 100.0 2.3E-44 7.8E-49 343.0 30.2 366 19-414 4-396 (397)
52 3ly1_A Putative histidinol-pho 100.0 1.1E-43 3.8E-48 333.1 34.3 336 42-417 13-351 (354)
53 3get_A Histidinol-phosphate am 100.0 7.8E-44 2.7E-48 335.5 33.3 334 43-415 28-364 (365)
54 7aat_A Aspartate aminotransfer 100.0 7.2E-44 2.5E-48 340.0 31.6 368 20-415 7-400 (401)
55 3euc_A Histidinol-phosphate am 100.0 3.7E-43 1.2E-47 331.2 34.3 332 44-416 29-366 (367)
56 1ajs_A Aspartate aminotransfer 100.0 6.5E-44 2.2E-48 341.6 29.6 372 19-418 8-411 (412)
57 1yaa_A Aspartate aminotransfer 100.0 1.5E-43 5.3E-48 338.9 28.7 372 17-418 5-411 (412)
58 3if2_A Aminotransferase; YP_26 100.0 1.4E-42 4.7E-47 335.6 33.9 384 14-421 2-443 (444)
59 3op7_A Aminotransferase class 100.0 1.1E-42 3.8E-47 328.8 31.5 326 70-420 47-373 (375)
60 1fg7_A Histidinol phosphate am 100.0 2.2E-42 7.7E-47 324.1 33.2 322 45-413 29-353 (356)
61 3meb_A Aspartate aminotransfer 100.0 2.4E-42 8.1E-47 333.6 33.7 375 17-419 25-445 (448)
62 3ftb_A Histidinol-phosphate am 100.0 7.6E-42 2.6E-46 321.4 35.4 334 43-416 24-359 (361)
63 3g7q_A Valine-pyruvate aminotr 100.0 1.3E-42 4.6E-47 333.0 30.8 372 25-420 14-415 (417)
64 1lc5_A COBD, L-threonine-O-3-p 100.0 7.1E-42 2.4E-46 321.9 35.0 336 43-418 22-360 (364)
65 4eu1_A Mitochondrial aspartate 100.0 3.4E-43 1.2E-47 336.1 26.4 365 17-415 17-408 (409)
66 3d6k_A Putative aminotransfera 100.0 9.2E-43 3.1E-47 334.4 28.3 348 46-420 33-420 (422)
67 3ppl_A Aspartate aminotransfer 100.0 5.1E-43 1.8E-47 336.8 26.6 350 44-420 32-422 (427)
68 2q7w_A Aspartate aminotransfer 100.0 4.4E-43 1.5E-47 334.1 24.3 370 19-414 4-395 (396)
69 3f6t_A Aspartate aminotransfer 100.0 2.5E-42 8.7E-47 339.3 29.5 357 46-420 104-527 (533)
70 3b1d_A Betac-S lyase; HET: PLP 100.0 2E-46 6.9E-51 356.5 0.0 351 46-416 32-391 (392)
71 3ez1_A Aminotransferase MOCR f 100.0 1.9E-42 6.5E-47 332.5 25.8 350 44-420 24-417 (423)
72 2ay1_A Aroat, aromatic amino a 100.0 5.9E-42 2E-46 326.0 27.9 363 19-414 4-392 (394)
73 2zy4_A L-aspartate beta-decarb 100.0 3.1E-41 1.1E-45 331.5 31.3 350 47-419 106-523 (546)
74 4h51_A Aspartate aminotransfer 100.0 5.8E-41 2E-45 317.6 31.5 379 14-421 15-420 (420)
75 3fkd_A L-threonine-O-3-phospha 100.0 1.2E-40 4.2E-45 311.8 28.9 327 43-418 13-342 (350)
76 3cq5_A Histidinol-phosphate am 100.0 1E-39 3.6E-44 307.7 34.4 331 47-416 32-366 (369)
77 3p1t_A Putative histidinol-pho 100.0 3.4E-39 1.2E-43 300.4 35.8 321 43-415 14-334 (337)
78 3hdo_A Histidinol-phosphate am 100.0 3.2E-39 1.1E-43 303.4 35.1 329 43-417 24-354 (360)
79 3bwn_A AT1G70560, L-tryptophan 100.0 7.3E-41 2.5E-45 317.5 20.9 330 43-417 20-386 (391)
80 2hox_A ALLIIN lyase 1; cystein 100.0 1.3E-40 4.5E-45 318.8 21.1 332 43-417 54-424 (427)
81 1uu1_A Histidinol-phosphate am 100.0 1.8E-38 6E-43 295.3 29.8 316 45-414 19-334 (335)
82 3a2b_A Serine palmitoyltransfe 100.0 1.1E-36 3.6E-41 290.2 33.2 338 43-419 41-393 (398)
83 1t3i_A Probable cysteine desul 100.0 2.7E-36 9.1E-41 289.4 30.3 336 44-420 26-415 (420)
84 1kmj_A Selenocysteine lyase; p 100.0 1.8E-36 6.2E-41 289.2 27.2 334 43-418 20-405 (406)
85 1vjo_A Alanine--glyoxylate ami 100.0 1.3E-35 4.6E-40 282.1 29.6 318 62-415 44-392 (393)
86 2dr1_A PH1308 protein, 386AA l 100.0 5.5E-35 1.9E-39 277.1 32.5 322 62-419 30-380 (386)
87 1eg5_A Aminotransferase; PLP-d 100.0 7.8E-35 2.7E-39 275.8 30.2 331 48-419 3-377 (384)
88 3tqx_A 2-amino-3-ketobutyrate 100.0 1.4E-34 4.8E-39 275.5 30.9 335 44-419 42-397 (399)
89 2huf_A Alanine glyoxylate amin 100.0 1.7E-34 5.8E-39 274.4 29.3 332 44-420 17-385 (393)
90 1elu_A L-cysteine/L-cystine C- 100.0 3.5E-35 1.2E-39 278.8 24.5 330 45-413 15-387 (390)
91 2z9v_A Aspartate aminotransfer 100.0 3.4E-34 1.1E-38 272.3 30.2 332 46-419 8-372 (392)
92 2w8t_A SPT, serine palmitoyltr 100.0 5.3E-34 1.8E-38 273.8 31.5 338 43-421 62-418 (427)
93 3lvm_A Cysteine desulfurase; s 100.0 2.7E-34 9.1E-39 275.8 29.3 337 40-420 16-401 (423)
94 1bs0_A Protein (8-amino-7-oxon 100.0 4.3E-34 1.5E-38 270.8 29.7 328 43-414 37-383 (384)
95 2ch1_A 3-hydroxykynurenine tra 100.0 4.7E-34 1.6E-38 271.6 27.5 322 61-420 27-385 (396)
96 4eb5_A Probable cysteine desul 100.0 1.8E-33 6.3E-38 266.2 31.3 335 48-420 2-375 (382)
97 2bwn_A 5-aminolevulinate synth 100.0 5.5E-34 1.9E-38 271.6 27.3 335 44-418 45-400 (401)
98 1fc4_A 2-amino-3-ketobutyrate 100.0 8.6E-34 2.9E-38 270.3 28.4 333 43-419 43-398 (401)
99 2e7j_A SEP-tRNA:Cys-tRNA synth 100.0 4.1E-35 1.4E-39 276.5 18.2 326 44-418 6-370 (371)
100 4hvk_A Probable cysteine desul 100.0 2E-33 6.8E-38 265.8 29.5 336 48-420 2-375 (382)
101 3kki_A CAI-1 autoinducer synth 100.0 9.8E-33 3.3E-37 263.7 33.9 332 43-418 57-404 (409)
102 3zrp_A Serine-pyruvate aminotr 100.0 1.8E-33 6.1E-38 266.4 28.6 319 61-419 11-364 (384)
103 1e5e_A MGL, methionine gamma-l 100.0 8.5E-33 2.9E-37 263.0 32.4 315 48-419 21-396 (404)
104 1iug_A Putative aspartate amin 100.0 1.7E-33 5.8E-38 263.4 27.1 318 61-419 10-349 (352)
105 1sff_A 4-aminobutyrate aminotr 100.0 3E-34 1E-38 275.7 22.5 348 43-419 39-425 (426)
106 3nnk_A Ureidoglycine-glyoxylat 100.0 5E-33 1.7E-37 265.9 30.6 332 44-419 11-391 (411)
107 3kgw_A Alanine-glyoxylate amin 100.0 4.1E-33 1.4E-37 264.7 28.9 322 61-421 32-391 (393)
108 3cai_A Possible aminotransfera 100.0 3.3E-33 1.1E-37 266.7 27.3 327 46-413 26-404 (406)
109 1v72_A Aldolase; PLP-dependent 100.0 3.1E-33 1.1E-37 262.0 26.6 329 44-418 6-353 (356)
110 2yrr_A Aminotransferase, class 100.0 1.7E-33 5.8E-38 263.4 24.2 318 61-417 9-352 (353)
111 2eh6_A Acoat, acetylornithine 100.0 2.8E-33 9.4E-38 264.4 24.6 322 43-414 26-374 (375)
112 3f9t_A TDC, L-tyrosine decarbo 100.0 2.7E-32 9.2E-37 259.4 31.6 318 62-416 41-396 (397)
113 3isl_A Purine catabolism prote 100.0 2.5E-32 8.4E-37 261.5 30.9 331 45-419 10-391 (416)
114 4adb_A Succinylornithine trans 100.0 2.8E-33 9.6E-38 267.2 24.0 336 43-420 37-402 (406)
115 1m32_A 2-aminoethylphosphonate 100.0 1E-32 3.4E-37 259.5 27.0 330 46-417 4-364 (366)
116 2eo5_A 419AA long hypothetical 100.0 1.4E-32 4.9E-37 263.2 27.9 339 43-418 40-418 (419)
117 1svv_A Threonine aldolase; str 100.0 1.5E-32 5.2E-37 257.6 26.2 333 43-418 11-358 (359)
118 3i4j_A Aminotransferase, class 100.0 1.3E-32 4.5E-37 264.5 26.2 356 43-419 27-429 (430)
119 3f0h_A Aminotransferase; RER07 100.0 6.6E-32 2.2E-36 255.0 30.3 328 46-417 19-373 (376)
120 2ord_A Acoat, acetylornithine 100.0 1.4E-33 4.9E-38 268.4 18.7 331 43-417 38-396 (397)
121 3vax_A Putative uncharacterize 100.0 8.9E-34 3E-38 270.1 16.3 338 43-417 17-399 (400)
122 3ruy_A Ornithine aminotransfer 100.0 1.5E-32 5.3E-37 260.9 24.8 327 43-415 34-391 (392)
123 4ffc_A 4-aminobutyrate aminotr 100.0 1.7E-32 5.7E-37 264.9 25.0 358 43-422 62-453 (453)
124 1jg8_A L-ALLO-threonine aldola 100.0 2.8E-32 9.6E-37 254.7 25.3 326 45-418 3-346 (347)
125 1zod_A DGD, 2,2-dialkylglycine 100.0 9.7E-33 3.3E-37 265.7 22.3 351 43-418 41-432 (433)
126 1s0a_A Adenosylmethionine-8-am 100.0 8.5E-32 2.9E-36 258.7 27.8 339 43-418 41-424 (429)
127 2pb2_A Acetylornithine/succiny 100.0 6.4E-32 2.2E-36 258.5 25.5 335 43-418 55-418 (420)
128 3dxv_A Alpha-amino-epsilon-cap 100.0 9.1E-32 3.1E-36 259.3 26.3 348 43-419 41-426 (439)
129 2aeu_A Hypothetical protein MJ 100.0 2.9E-31 9.9E-36 249.9 29.1 331 44-420 26-373 (374)
130 3nx3_A Acoat, acetylornithine 100.0 1.2E-31 4.1E-36 254.9 26.3 333 43-417 34-394 (395)
131 3ffr_A Phosphoserine aminotran 100.0 4E-31 1.4E-35 248.2 29.6 327 46-415 4-361 (362)
132 1vef_A Acetylornithine/acetyl- 100.0 4E-32 1.4E-36 258.3 22.8 337 43-415 43-394 (395)
133 4a6r_A Omega transaminase; tra 100.0 1.6E-31 5.5E-36 258.7 26.9 353 42-419 47-450 (459)
134 2ez2_A Beta-tyrosinase, tyrosi 100.0 2.5E-31 8.4E-36 257.6 28.1 325 62-419 55-432 (456)
135 3n5m_A Adenosylmethionine-8-am 100.0 1.8E-31 6.3E-36 258.1 26.6 351 43-417 47-451 (452)
136 3gju_A Putative aminotransfera 100.0 3.3E-31 1.1E-35 256.6 27.9 356 43-420 49-458 (460)
137 2dkj_A Serine hydroxymethyltra 100.0 3.1E-31 1.1E-35 253.1 26.7 335 45-417 23-387 (407)
138 3a9z_A Selenocysteine lyase; P 100.0 3.4E-31 1.1E-35 254.9 26.7 335 44-420 16-430 (432)
139 2oga_A Transaminase; PLP-depen 100.0 3.4E-31 1.2E-35 252.1 25.9 326 45-419 30-397 (399)
140 3oks_A 4-aminobutyrate transam 100.0 1.1E-31 3.7E-36 259.2 22.6 353 43-417 59-450 (451)
141 3l44_A Glutamate-1-semialdehyd 100.0 1.2E-31 4.2E-36 258.1 22.8 346 43-421 53-433 (434)
142 2bkw_A Alanine-glyoxylate amin 100.0 2.4E-31 8.3E-36 251.9 24.2 329 45-417 4-383 (385)
143 1b9h_A AHBA synthase, protein 100.0 3.5E-30 1.2E-34 244.3 31.4 314 65-417 17-387 (388)
144 2po3_A 4-dehydrase; external a 100.0 5.8E-30 2E-34 245.5 31.9 334 43-418 12-386 (424)
145 1z7d_A Ornithine aminotransfer 100.0 8E-31 2.8E-35 251.8 25.9 334 43-420 63-431 (433)
146 2oat_A Ornithine aminotransfer 100.0 2.9E-30 9.9E-35 248.2 29.6 331 43-417 74-438 (439)
147 2rfv_A Methionine gamma-lyase; 100.0 1.7E-29 5.7E-34 240.3 33.2 317 49-413 24-395 (398)
148 3tfu_A Adenosylmethionine-8-am 100.0 3.4E-31 1.2E-35 255.6 20.8 342 43-419 71-454 (457)
149 3dod_A Adenosylmethionine-8-am 100.0 1.3E-30 4.3E-35 251.8 24.6 349 43-420 42-445 (448)
150 3a8u_X Omega-amino acid--pyruv 100.0 7.7E-31 2.6E-35 253.6 23.1 348 43-418 48-447 (449)
151 2c0r_A PSAT, phosphoserine ami 100.0 1.2E-30 4.1E-35 245.1 23.6 324 47-418 5-361 (362)
152 1ax4_A Tryptophanase; tryptoph 100.0 1.7E-30 5.9E-35 252.5 25.3 322 65-418 55-441 (467)
153 1w23_A Phosphoserine aminotran 100.0 5.4E-31 1.8E-35 247.3 20.7 322 47-417 4-359 (360)
154 1qz9_A Kynureninase; kynurenin 100.0 3.7E-30 1.3E-34 246.4 26.9 321 45-418 27-402 (416)
155 3i5t_A Aminotransferase; pyrid 100.0 3.3E-30 1.1E-34 250.0 26.0 349 43-420 52-456 (476)
156 3k28_A Glutamate-1-semialdehyd 100.0 1.2E-30 4.1E-35 250.7 21.9 343 43-419 51-428 (429)
157 3hmu_A Aminotransferase, class 100.0 3.2E-30 1.1E-34 249.6 24.3 349 43-419 53-453 (472)
158 3mad_A Sphingosine-1-phosphate 100.0 2.9E-29 9.8E-34 246.4 30.6 312 82-420 130-471 (514)
159 1ibj_A CBL, cystathionine beta 100.0 5.9E-30 2E-34 246.4 24.3 328 45-418 89-462 (464)
160 3mc6_A Sphingosine-1-phosphate 100.0 1.9E-29 6.6E-34 246.8 28.4 334 62-420 75-439 (497)
161 1mdo_A ARNB aminotransferase; 100.0 3.4E-29 1.2E-33 237.8 29.0 323 46-418 9-386 (393)
162 3lws_A Aromatic amino acid bet 100.0 2.5E-30 8.5E-35 242.5 20.7 299 81-415 41-356 (357)
163 2c81_A Glutamine-2-deoxy-scyll 100.0 1.1E-28 3.9E-33 236.2 32.3 320 63-419 14-415 (418)
164 3e9k_A Kynureninase; kynurenin 100.0 6.7E-30 2.3E-34 248.0 23.4 333 45-420 66-463 (465)
165 1rv3_A Serine hydroxymethyltra 100.0 1.5E-29 5.1E-34 245.8 24.7 346 45-417 44-430 (483)
166 3uwc_A Nucleotide-sugar aminot 100.0 2.8E-29 9.4E-34 236.9 25.8 324 44-418 5-371 (374)
167 3pj0_A LMO0305 protein; struct 100.0 3.6E-30 1.2E-34 241.6 19.5 329 44-414 12-358 (359)
168 2cy8_A D-phgat, D-phenylglycin 100.0 1.5E-29 5E-34 244.8 24.1 334 43-419 55-436 (453)
169 2epj_A Glutamate-1-semialdehyd 100.0 9.8E-30 3.4E-34 244.7 22.2 336 43-418 54-431 (434)
170 3n0l_A Serine hydroxymethyltra 100.0 7.5E-29 2.6E-33 237.4 28.1 337 46-418 26-389 (417)
171 3fq8_A Glutamate-1-semialdehyd 100.0 3E-29 1E-33 240.9 23.5 342 43-417 50-426 (427)
172 2dgk_A GAD-beta, GADB, glutama 100.0 5.1E-28 1.7E-32 233.8 32.2 336 62-419 53-435 (452)
173 1wyu_B Glycine dehydrogenase s 100.0 9E-29 3.1E-33 240.2 27.0 332 46-417 67-440 (474)
174 2e7u_A Glutamate-1-semialdehyd 100.0 1.7E-29 5.9E-34 242.3 21.2 333 43-415 50-424 (424)
175 4e77_A Glutamate-1-semialdehyd 100.0 2.4E-29 8.2E-34 241.6 22.2 345 43-417 51-428 (429)
176 2cjg_A L-lysine-epsilon aminot 100.0 1.8E-29 6.1E-34 243.5 20.5 336 43-418 52-448 (449)
177 3ndn_A O-succinylhomoserine su 100.0 1.6E-28 5.4E-33 233.5 26.3 286 88-415 82-413 (414)
178 3ecd_A Serine hydroxymethyltra 100.0 4.4E-28 1.5E-32 232.5 29.4 334 46-418 33-397 (425)
179 2fnu_A Aminotransferase; prote 100.0 6.3E-28 2.1E-32 227.6 29.4 313 62-418 10-372 (375)
180 1gc0_A Methionine gamma-lyase; 100.0 1.8E-27 6.3E-32 226.1 31.6 281 86-413 64-396 (398)
181 3dr4_A Putative perosamine syn 100.0 3E-28 1E-32 231.2 25.0 325 43-415 20-390 (391)
182 2fyf_A PSAT, phosphoserine ami 100.0 1.4E-28 4.8E-33 233.9 22.8 324 45-417 39-397 (398)
183 3hbx_A GAD 1, glutamate decarb 100.0 2.3E-27 8E-32 231.4 31.7 367 28-420 39-446 (502)
184 2cb1_A O-acetyl homoserine sul 100.0 6.5E-27 2.2E-31 223.3 33.3 308 61-413 32-411 (412)
185 3h7f_A Serine hydroxymethyltra 100.0 6E-28 2.1E-32 232.8 26.3 337 46-418 46-414 (447)
186 3frk_A QDTB; aminotransferase, 100.0 9.4E-29 3.2E-33 233.1 20.1 311 63-417 15-367 (373)
187 1cs1_A CGS, protein (cystathio 100.0 4.8E-27 1.7E-31 222.4 31.8 285 87-419 52-384 (386)
188 2oqx_A Tryptophanase; lyase, p 100.0 4.9E-29 1.7E-33 242.2 16.8 330 65-419 53-443 (467)
189 2vi8_A Serine hydroxymethyltra 100.0 9E-28 3.1E-32 229.0 25.1 332 44-418 23-387 (405)
190 3acz_A Methionine gamma-lyase; 100.0 6.5E-27 2.2E-31 221.4 30.7 281 87-416 59-387 (389)
191 3qhx_A Cystathionine gamma-syn 100.0 6.3E-27 2.1E-31 221.6 30.1 284 87-415 66-391 (392)
192 1pff_A Methionine gamma-lyase; 100.0 3E-27 1E-31 219.2 27.0 277 91-414 2-330 (331)
193 3nyt_A Aminotransferase WBPE; 100.0 5.4E-28 1.8E-32 227.4 21.6 305 62-414 13-360 (367)
194 1qgn_A Protein (cystathionine 100.0 1E-26 3.5E-31 222.1 29.9 284 88-417 115-444 (445)
195 3ke3_A Putative serine-pyruvat 100.0 8.2E-27 2.8E-31 220.2 27.6 296 90-419 38-377 (379)
196 3gbx_A Serine hydroxymethyltra 100.0 4E-27 1.4E-31 225.5 25.2 327 63-418 42-396 (420)
197 3ri6_A O-acetylhomoserine sulf 100.0 1.4E-26 4.8E-31 220.5 28.2 290 87-415 82-429 (430)
198 1n8p_A Cystathionine gamma-lya 100.0 9.7E-27 3.3E-31 220.3 26.5 283 87-414 55-391 (393)
199 2qma_A Diaminobutyrate-pyruvat 100.0 8.5E-27 2.9E-31 227.8 26.9 336 62-418 111-496 (497)
200 2okj_A Glutamate decarboxylase 100.0 2.7E-26 9.3E-31 224.6 30.2 329 69-418 111-502 (504)
201 1o69_A Aminotransferase; struc 100.0 3.5E-26 1.2E-30 217.0 28.8 310 64-416 11-385 (394)
202 3ju7_A Putative PLP-dependent 100.0 1.2E-26 4.1E-31 218.3 24.4 314 61-418 12-375 (377)
203 3cog_A Cystathionine gamma-lya 100.0 1.3E-25 4.4E-30 213.2 30.8 282 87-418 67-398 (403)
204 3vp6_A Glutamate decarboxylase 99.9 1.1E-25 3.8E-30 219.9 29.6 336 65-418 110-505 (511)
205 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.9 1.8E-25 6E-30 215.1 30.5 321 44-416 30-434 (437)
206 2fq6_A Cystathionine beta-lyas 99.9 8.6E-26 2.9E-30 214.5 27.5 214 87-339 82-303 (415)
207 1js3_A DDC;, DOPA decarboxylas 99.9 2.6E-26 9E-31 223.9 24.5 332 64-420 87-476 (486)
208 2z67_A O-phosphoseryl-tRNA(SEC 99.9 9.8E-27 3.3E-31 224.7 17.0 296 90-415 132-455 (456)
209 1ohv_A 4-aminobutyrate aminotr 99.9 4.6E-26 1.6E-30 220.7 21.2 342 42-418 60-471 (472)
210 2yky_A Beta-transaminase; tran 99.9 6E-29 2.1E-33 237.9 0.0 334 43-419 98-461 (465)
211 2a7v_A Serine hydroxymethyltra 99.9 6.5E-25 2.2E-29 211.2 27.9 345 46-417 55-440 (490)
212 3nmy_A Xometc, cystathionine g 99.9 1.1E-24 3.9E-29 206.0 29.0 283 88-416 68-397 (400)
213 2x3l_A ORN/Lys/Arg decarboxyla 99.9 5.6E-26 1.9E-30 218.5 19.3 291 83-418 53-353 (446)
214 2jis_A Cysteine sulfinic acid 99.9 3.4E-24 1.1E-28 210.2 31.6 334 63-417 120-514 (515)
215 2ctz_A O-acetyl-L-homoserine s 99.9 3E-24 1E-28 205.1 30.3 287 88-415 59-420 (421)
216 4e1o_A HDC, histidine decarbox 99.9 1.1E-24 3.6E-29 211.7 26.8 332 64-420 92-480 (481)
217 3b8x_A WBDK, pyridoxamine 5-ph 99.9 8E-24 2.7E-28 200.6 31.1 307 62-411 12-389 (390)
218 3k40_A Aromatic-L-amino-acid d 99.9 1.7E-24 5.7E-29 209.7 26.1 340 64-422 87-475 (475)
219 1wyu_A Glycine dehydrogenase ( 99.9 2.7E-24 9.1E-29 206.9 27.1 284 89-415 110-437 (438)
220 3qm2_A Phosphoserine aminotran 99.9 1.3E-24 4.6E-29 203.3 23.1 331 48-418 28-385 (386)
221 3e77_A Phosphoserine aminotran 99.9 2.7E-24 9.1E-29 200.0 24.3 326 61-418 22-375 (377)
222 3m5u_A Phosphoserine aminotran 99.9 5.3E-24 1.8E-28 197.4 24.5 323 45-418 4-360 (361)
223 1c4k_A Protein (ornithine deca 99.9 5.4E-23 1.8E-27 206.4 26.8 314 85-419 171-567 (730)
224 3hvy_A Cystathionine beta-lyas 99.9 2.4E-22 8.1E-27 190.4 26.3 254 65-356 47-340 (427)
225 3jzl_A Putative cystathionine 99.9 3.4E-22 1.2E-26 188.7 27.2 241 65-340 32-304 (409)
226 3i16_A Aluminum resistance pro 99.9 4.7E-22 1.6E-26 188.3 26.9 255 65-356 46-340 (427)
227 4ao9_A Beta-phenylalanine amin 99.9 6E-22 2.1E-26 188.1 24.8 337 43-419 85-447 (454)
228 3ht4_A Aluminum resistance pro 99.9 6.1E-22 2.1E-26 188.6 23.1 263 65-356 38-329 (431)
229 2vyc_A Biodegradative arginine 99.9 1.1E-21 3.7E-26 198.8 26.0 307 88-418 206-605 (755)
230 4e3q_A Pyruvate transaminase; 99.9 2.8E-21 9.6E-26 185.1 26.8 351 42-420 64-470 (473)
231 4atq_A 4-aminobutyrate transam 99.9 5.4E-21 1.8E-25 182.5 27.3 351 43-418 62-455 (456)
232 3n75_A LDC, lysine decarboxyla 99.8 3.2E-19 1.1E-23 177.6 24.0 307 84-418 192-560 (715)
233 4a0g_A Adenosylmethionine-8-am 99.8 2.6E-20 9E-25 190.0 12.0 348 46-418 381-828 (831)
234 3hl2_A O-phosphoseryl-tRNA(SEC 99.8 7.6E-18 2.6E-22 155.9 23.2 310 94-422 120-465 (501)
235 3ou5_A Serine hydroxymethyltra 99.8 5.5E-16 1.9E-20 142.9 26.6 333 62-416 65-439 (490)
236 3bc8_A O-phosphoseryl-tRNA(SEC 99.7 5.2E-16 1.8E-20 145.8 21.5 314 90-421 97-446 (450)
237 2yvq_A Carbamoyl-phosphate syn 76.3 21 0.00073 27.3 9.3 109 107-222 21-131 (143)
238 3gh5_A HEX1, beta-hexosaminida 68.8 21 0.00073 34.1 9.1 111 106-220 126-273 (525)
239 1ofu_X SULA, hypothetical prot 63.1 43 0.0015 24.7 9.6 104 112-220 6-114 (119)
240 1oft_A SULA, hypothetical prot 62.2 54 0.0019 25.6 10.1 104 112-220 48-156 (161)
241 2gjh_A Designed protein; oblig 59.7 21 0.00073 21.1 4.5 27 392-418 3-30 (62)
242 4fgs_A Probable dehydrogenase 54.2 62 0.0021 27.8 8.7 96 112-212 30-134 (273)
243 3rjz_A N-type ATP pyrophosphat 52.9 97 0.0033 26.0 9.4 99 112-220 7-120 (237)
244 2gjx_A Beta-hexosaminidase alp 52.1 39 0.0013 32.2 7.7 26 195-220 207-232 (507)
245 3rwb_A TPLDH, pyridoxal 4-dehy 49.7 85 0.0029 26.1 9.0 96 111-211 7-110 (247)
246 4dqx_A Probable oxidoreductase 48.5 98 0.0034 26.4 9.3 96 111-211 28-131 (277)
247 3tpc_A Short chain alcohol deh 44.7 1.1E+02 0.0037 25.6 8.9 96 111-211 8-115 (257)
248 3lkv_A Uncharacterized conserv 44.7 1.5E+02 0.0052 25.5 10.2 147 64-224 22-177 (302)
249 3rd5_A Mypaa.01249.C; ssgcid, 44.6 61 0.0021 27.9 7.4 67 111-182 17-83 (291)
250 1bqc_A Protein (beta-mannanase 43.9 46 0.0016 28.9 6.5 22 202-223 64-85 (302)
251 2nu8_A Succinyl-COA ligase [AD 43.3 39 0.0013 29.4 5.8 50 172-227 77-126 (288)
252 2q5c_A NTRC family transcripti 43.1 86 0.0029 25.3 7.5 43 117-163 36-78 (196)
253 4e6p_A Probable sorbitol dehyd 42.7 1.2E+02 0.0042 25.3 8.9 95 111-210 9-111 (259)
254 3m1a_A Putative dehydrogenase; 42.0 1.1E+02 0.0038 25.9 8.7 93 113-210 7-108 (281)
255 2yv1_A Succinyl-COA ligase [AD 41.0 76 0.0026 27.6 7.3 50 172-227 83-132 (294)
256 3grp_A 3-oxoacyl-(acyl carrier 40.3 1.2E+02 0.004 25.7 8.4 95 111-210 28-130 (266)
257 1now_A Beta-hexosaminidase bet 40.2 1.8E+02 0.0061 27.6 10.2 24 197-220 214-237 (507)
258 3gvc_A Oxidoreductase, probabl 39.9 1E+02 0.0035 26.3 8.0 95 112-211 30-133 (277)
259 1jak_A Beta-N-acetylhexosamini 39.5 48 0.0016 31.6 6.1 24 197-220 225-248 (512)
260 3e2i_A Thymidine kinase; Zn-bi 39.4 60 0.0021 26.8 5.9 95 119-227 42-139 (219)
261 4eso_A Putative oxidoreductase 38.2 1.5E+02 0.0051 24.7 8.7 95 111-211 9-112 (255)
262 3ppi_A 3-hydroxyacyl-COA dehyd 37.7 1.3E+02 0.0044 25.5 8.3 53 112-164 32-84 (281)
263 4g81_D Putative hexonate dehyd 37.5 1.8E+02 0.0063 24.5 9.0 94 112-211 10-116 (255)
264 3mwd_B ATP-citrate synthase; A 37.1 78 0.0027 28.1 6.8 76 142-227 65-142 (334)
265 4gqr_A Pancreatic alpha-amylas 36.8 23 0.00079 33.3 3.6 33 194-229 71-103 (496)
266 3tzq_B Short-chain type dehydr 36.6 1.9E+02 0.0065 24.3 9.5 95 111-210 12-116 (271)
267 3op4_A 3-oxoacyl-[acyl-carrier 36.6 1.5E+02 0.0052 24.6 8.5 95 111-210 10-112 (248)
268 3n74_A 3-ketoacyl-(acyl-carrie 36.1 1.9E+02 0.0064 24.0 9.2 95 111-210 10-113 (261)
269 1qys_A TOP7; alpha-beta, novel 35.6 66 0.0023 21.2 4.4 28 391-418 46-74 (106)
270 1vhx_A Putative holliday junct 35.4 94 0.0032 23.8 6.2 59 169-227 40-102 (150)
271 3l5o_A Uncharacterized protein 35.1 73 0.0025 27.3 6.0 78 133-220 140-217 (270)
272 4hp8_A 2-deoxy-D-gluconate 3-d 35.1 1.4E+02 0.0049 25.1 7.9 97 112-213 10-111 (247)
273 2yv2_A Succinyl-COA synthetase 34.7 79 0.0027 27.5 6.4 51 171-227 83-133 (297)
274 3ged_A Short-chain dehydrogena 34.3 2E+02 0.0069 24.1 8.7 93 112-211 4-105 (247)
275 3pxx_A Carveol dehydrogenase; 34.2 1.3E+02 0.0044 25.6 7.8 31 111-141 11-41 (287)
276 1x7f_A Outer surface protein; 33.7 66 0.0023 29.2 5.7 54 203-269 74-127 (385)
277 3l6e_A Oxidoreductase, short-c 33.7 1.5E+02 0.0051 24.4 7.9 95 112-211 5-107 (235)
278 1b93_A Protein (methylglyoxal 33.6 1.5E+02 0.0053 22.8 7.1 82 134-224 39-121 (152)
279 3guy_A Short-chain dehydrogena 33.5 1.1E+02 0.0038 24.9 7.0 94 113-211 4-102 (230)
280 1i4n_A Indole-3-glycerol phosp 33.3 55 0.0019 27.7 4.9 50 169-224 109-158 (251)
281 2o23_A HADH2 protein; HSD17B10 33.1 2.1E+02 0.0072 23.7 10.0 65 111-180 13-77 (265)
282 2e8y_A AMYX protein, pullulana 33.0 21 0.00071 35.8 2.6 28 202-229 315-342 (718)
283 1c7s_A Beta-N-acetylhexosamini 32.4 1.1E+02 0.0036 31.3 7.5 29 195-223 392-422 (858)
284 2yl5_A Beta-N-acetylhexosamini 31.9 36 0.0012 31.8 3.9 31 194-224 86-118 (442)
285 2yl6_A Beta-N-acetylhexosamini 31.7 35 0.0012 31.7 3.8 30 195-224 84-115 (434)
286 1g94_A Alpha-amylase; beta-alp 31.6 36 0.0012 31.7 3.9 32 195-229 60-91 (448)
287 3auf_A Glycinamide ribonucleot 30.9 1.3E+02 0.0044 25.0 6.8 89 113-206 26-120 (229)
288 2ya0_A Putative alkaline amylo 30.9 33 0.0011 34.3 3.7 27 202-228 254-280 (714)
289 3bzy_B ESCU; auto cleavage pro 30.8 29 0.00098 23.7 2.2 24 203-226 27-50 (83)
290 3av3_A Phosphoribosylglycinami 30.8 1.2E+02 0.0042 24.8 6.6 88 114-206 8-101 (212)
291 1lwj_A 4-alpha-glucanotransfer 30.1 45 0.0015 31.0 4.3 28 202-229 69-96 (441)
292 3gem_A Short chain dehydrogena 29.7 2E+02 0.0069 24.0 8.2 32 110-141 27-58 (260)
293 4dzz_A Plasmid partitioning pr 29.6 2E+02 0.007 22.6 7.9 46 121-166 63-108 (206)
294 1oi7_A Succinyl-COA synthetase 29.4 73 0.0025 27.6 5.2 50 172-227 77-126 (288)
295 1ht6_A AMY1, alpha-amylase iso 29.1 43 0.0015 30.7 3.9 28 202-229 68-95 (405)
296 1mxg_A Alpha amylase; hyperthe 28.4 49 0.0017 30.7 4.2 28 202-229 86-113 (435)
297 1pq4_A Periplasmic binding pro 28.3 1.6E+02 0.0054 25.4 7.2 73 133-220 189-264 (291)
298 3f9i_A 3-oxoacyl-[acyl-carrier 28.2 1.8E+02 0.0061 23.9 7.5 67 111-182 15-81 (249)
299 4ibo_A Gluconate dehydrogenase 28.2 2.7E+02 0.0092 23.4 8.9 95 111-210 27-132 (271)
300 2j9r_A Thymidine kinase; TK1, 28.2 98 0.0033 25.5 5.5 92 119-224 42-136 (214)
301 1hdc_A 3-alpha, 20 beta-hydrox 28.1 2.6E+02 0.0087 23.2 9.1 94 112-210 7-108 (254)
302 1gcy_A Glucan 1,4-alpha-maltot 28.0 52 0.0018 31.4 4.4 33 195-230 88-120 (527)
303 3o63_A Probable thiamine-phosp 27.9 73 0.0025 26.8 4.8 51 173-224 46-104 (243)
304 1ud2_A Amylase, alpha-amylase; 27.6 41 0.0014 31.7 3.6 28 202-229 80-107 (480)
305 3bh4_A Alpha-amylase; calcium, 27.4 42 0.0014 31.6 3.6 28 202-229 78-105 (483)
306 3h7a_A Short chain dehydrogena 27.3 2.7E+02 0.0091 23.1 10.4 95 111-210 8-112 (252)
307 4dyv_A Short-chain dehydrogena 27.0 2.5E+02 0.0084 23.7 8.2 95 112-211 29-133 (272)
308 1hvx_A Alpha-amylase; hydrolas 27.0 43 0.0015 31.9 3.6 28 202-229 81-108 (515)
309 3uve_A Carveol dehydrogenase ( 26.9 2.4E+02 0.0081 23.9 8.2 30 111-140 12-41 (286)
310 3gaf_A 7-alpha-hydroxysteroid 26.8 2.7E+02 0.0093 23.1 8.5 95 111-210 13-117 (256)
311 2guy_A Alpha-amylase A; (beta- 26.7 49 0.0017 31.1 3.9 28 202-229 97-124 (478)
312 1wpc_A Glucan 1,4-alpha-maltoh 26.6 44 0.0015 31.5 3.6 27 202-228 82-108 (485)
313 4a29_A Engineered retro-aldol 26.6 41 0.0014 28.6 2.9 82 136-226 81-162 (258)
314 1wza_A Alpha-amylase A; hydrol 26.4 53 0.0018 30.9 4.1 27 202-228 81-107 (488)
315 4aie_A Glucan 1,6-alpha-glucos 26.2 44 0.0015 31.9 3.6 27 202-228 79-105 (549)
316 2z1k_A (NEO)pullulanase; hydro 26.1 57 0.002 30.6 4.3 27 202-228 96-122 (475)
317 1wzu_A Quinolinate synthetase 25.9 1.1E+02 0.0039 26.6 5.6 87 133-223 137-231 (300)
318 2pju_A Propionate catabolism o 25.8 2.8E+02 0.0096 22.9 9.6 15 203-217 141-155 (225)
319 1jae_A Alpha-amylase; glycosid 25.8 51 0.0018 30.9 3.9 28 202-229 74-101 (471)
320 2fp4_A Succinyl-COA ligase [GD 25.8 60 0.002 28.5 4.0 50 173-228 85-135 (305)
321 4exb_A Putative uncharacterize 25.7 3.2E+02 0.011 23.5 9.9 134 64-223 69-236 (292)
322 1ua7_A Alpha-amylase; beta-alp 25.6 53 0.0018 30.3 3.8 28 202-229 74-101 (422)
323 1jkx_A GART;, phosphoribosylgl 25.6 2.5E+02 0.0086 22.9 7.6 88 114-206 5-98 (212)
324 3tsc_A Putative oxidoreductase 25.6 2.7E+02 0.0092 23.4 8.3 30 111-140 12-41 (277)
325 3sx2_A Putative 3-ketoacyl-(ac 25.6 2.2E+02 0.0074 24.0 7.7 31 111-141 14-44 (278)
326 2aaa_A Alpha-amylase; glycosid 25.4 56 0.0019 30.8 4.0 27 203-229 98-124 (484)
327 2vt1_B Surface presentation of 25.4 40 0.0014 23.6 2.2 24 203-226 27-50 (93)
328 3bk2_A RNAse J, metal dependen 25.3 1.6E+02 0.0054 28.3 7.3 78 132-217 337-423 (562)
329 2al1_A Enolase 1, 2-phospho-D- 25.3 67 0.0023 29.8 4.4 92 120-221 276-371 (436)
330 1hxh_A 3BETA/17BETA-hydroxyste 25.3 2.9E+02 0.0098 22.8 9.0 93 112-210 8-109 (253)
331 3m5v_A DHDPS, dihydrodipicolin 25.2 1.3E+02 0.0044 26.2 6.1 53 168-221 22-82 (301)
332 2dh2_A 4F2 cell-surface antige 25.2 59 0.002 30.0 4.1 28 202-229 81-108 (424)
333 4dmm_A 3-oxoacyl-[acyl-carrier 25.1 2.5E+02 0.0086 23.6 7.9 96 111-211 29-136 (269)
334 3dmy_A Protein FDRA; predicted 24.9 85 0.0029 29.5 5.1 73 141-224 21-94 (480)
335 4b79_A PA4098, probable short- 24.8 3E+02 0.01 22.9 8.4 92 112-212 12-107 (242)
336 3lyl_A 3-oxoacyl-(acyl-carrier 24.8 2.9E+02 0.0098 22.6 9.0 95 111-210 6-111 (247)
337 3ak4_A NADH-dependent quinucli 24.6 3E+02 0.01 22.8 9.5 31 111-141 13-43 (263)
338 3t7y_A YOP proteins translocat 24.6 39 0.0013 23.8 2.1 24 203-226 42-65 (97)
339 3ozo_A N-acetylglucosaminidase 24.5 88 0.003 30.2 5.2 24 197-220 250-273 (572)
340 4fn4_A Short chain dehydrogena 24.4 3.2E+02 0.011 23.0 8.5 95 112-212 8-116 (254)
341 3qlj_A Short chain dehydrogena 24.0 3.2E+02 0.011 23.6 8.7 30 112-141 28-58 (322)
342 1j0h_A Neopullulanase; beta-al 24.0 65 0.0022 31.2 4.3 28 202-229 222-249 (588)
343 1eye_A DHPS 1, dihydropteroate 23.9 2.2E+02 0.0075 24.5 7.1 24 202-225 154-180 (280)
344 3pff_A ATP-citrate synthase; p 23.9 1.5E+02 0.005 30.2 6.8 76 141-226 550-627 (829)
345 3nl6_A Thiamine biosynthetic b 23.7 83 0.0029 30.1 4.9 49 173-223 28-76 (540)
346 3dhu_A Alpha-amylase; structur 23.6 56 0.0019 30.4 3.7 28 202-229 83-110 (449)
347 2ya1_A Putative alkaline amylo 23.6 48 0.0016 34.7 3.4 27 202-228 561-587 (1014)
348 3c01_E Surface presentation of 23.6 42 0.0014 23.7 2.1 24 203-226 27-50 (98)
349 2wc7_A Alpha amylase, catalyti 23.5 56 0.0019 30.8 3.7 26 203-228 103-128 (488)
350 1hjs_A Beta-1,4-galactanase; 4 23.5 2.4E+02 0.0082 24.9 7.6 34 193-226 50-83 (332)
351 1vl8_A Gluconate 5-dehydrogena 23.4 3.3E+02 0.011 22.8 9.5 96 111-211 22-129 (267)
352 3tjr_A Short chain dehydrogena 23.1 3.5E+02 0.012 23.1 9.1 95 111-210 32-137 (301)
353 2a4k_A 3-oxoacyl-[acyl carrier 23.1 3.3E+02 0.011 22.7 8.4 64 112-180 8-71 (263)
354 2ki0_A DS119; beta-alpha-beta, 23.0 52 0.0018 17.2 1.8 18 202-219 14-31 (36)
355 3mfq_A TROA, high-affinity zin 22.9 74 0.0025 27.5 4.0 74 135-220 164-242 (282)
356 4fc7_A Peroxisomal 2,4-dienoyl 22.9 3.4E+02 0.012 22.8 9.7 95 112-211 29-135 (277)
357 3n0v_A Formyltetrahydrofolate 22.9 1.5E+02 0.0052 25.6 6.0 113 88-207 63-186 (286)
358 3o1l_A Formyltetrahydrofolate 22.9 1.8E+02 0.006 25.4 6.4 111 89-206 79-200 (302)
359 3io5_A Recombination and repai 22.7 1.5E+02 0.0051 26.3 5.9 102 119-224 42-171 (333)
360 1wzl_A Alpha-amylase II; pullu 22.7 64 0.0022 31.3 3.9 29 201-229 218-246 (585)
361 3pzt_A Endoglucanase; alpha/be 22.7 55 0.0019 28.9 3.2 23 202-224 104-126 (327)
362 3qtp_A Enolase 1; glycolysis, 22.6 2.1E+02 0.0073 26.4 7.1 94 119-221 281-378 (441)
363 2h1q_A Hypothetical protein; Z 22.6 1.7E+02 0.0059 25.0 6.2 72 133-214 140-211 (270)
364 2ew8_A (S)-1-phenylethanol deh 22.5 3.2E+02 0.011 22.4 10.1 94 112-210 9-111 (249)
365 2kfp_A Pspto_3016 protein; alp 22.5 1.2E+02 0.0039 22.5 4.5 38 371-410 72-111 (125)
366 3sju_A Keto reductase; short-c 22.4 3.5E+02 0.012 22.7 8.8 94 112-210 26-130 (279)
367 1nff_A Putative oxidoreductase 22.3 3.4E+02 0.011 22.5 9.1 30 112-141 9-38 (260)
368 2whl_A Beta-mannanase, baman5; 22.2 56 0.0019 28.2 3.2 24 201-224 62-85 (294)
369 3edf_A FSPCMD, cyclomaltodextr 22.2 73 0.0025 31.0 4.3 28 202-229 198-225 (601)
370 1x1t_A D(-)-3-hydroxybutyrate 22.1 3.4E+02 0.011 22.4 9.2 93 112-210 6-112 (260)
371 3is3_A 17BETA-hydroxysteroid d 22.1 2.8E+02 0.0097 23.2 7.7 95 112-211 19-126 (270)
372 1yht_A DSPB; beta barrel, hydr 22.0 68 0.0023 29.0 3.7 24 197-220 89-112 (367)
373 4gkb_A 3-oxoacyl-[acyl-carrier 21.9 3.6E+02 0.012 22.7 9.3 94 112-211 8-112 (258)
374 3faw_A Reticulocyte binding pr 21.9 61 0.0021 33.3 3.7 27 202-228 369-395 (877)
375 1m53_A Isomaltulose synthase; 21.8 68 0.0023 31.0 3.9 28 202-229 92-119 (570)
376 3pgx_A Carveol dehydrogenase; 21.8 3.5E+02 0.012 22.7 8.3 31 111-141 16-46 (280)
377 1zja_A Trehalulose synthase; s 21.7 69 0.0024 30.8 3.9 28 202-229 79-106 (557)
378 1x92_A APC5045, phosphoheptose 21.7 3E+02 0.01 21.7 12.8 39 175-220 106-144 (199)
379 3tsm_A IGPS, indole-3-glycerol 21.6 1.9E+02 0.0064 24.8 6.2 50 168-223 127-176 (272)
380 3tfo_A Putative 3-oxoacyl-(acy 21.5 3.6E+02 0.012 22.5 9.3 95 112-211 5-111 (264)
381 2cfc_A 2-(R)-hydroxypropyl-COM 21.3 3.3E+02 0.011 22.1 8.2 29 113-141 5-33 (250)
382 7a3h_A Endoglucanase; hydrolas 21.2 62 0.0021 28.2 3.2 24 202-225 79-102 (303)
383 3nyw_A Putative oxidoreductase 21.2 3.5E+02 0.012 22.3 8.0 30 112-142 9-39 (250)
384 3tha_A Tryptophan synthase alp 21.0 3.7E+02 0.013 22.6 7.9 95 122-221 104-204 (252)
385 2nuw_A 2-keto-3-deoxygluconate 21.0 3E+02 0.01 23.6 7.6 50 90-146 51-104 (288)
386 4aef_A Neopullulanase (alpha-a 20.9 72 0.0025 31.4 3.9 28 201-228 284-311 (645)
387 3l77_A Short-chain alcohol deh 20.9 3.3E+02 0.011 21.9 9.4 95 112-211 4-110 (235)
388 3rcn_A Beta-N-acetylhexosamini 20.7 74 0.0025 30.5 3.8 114 106-220 82-241 (543)
389 1uok_A Oligo-1,6-glucosidase; 20.7 74 0.0025 30.6 3.9 27 202-228 78-104 (558)
390 3rih_A Short chain dehydrogena 20.6 4E+02 0.014 22.7 10.1 95 112-211 42-149 (293)
391 1meo_A Phosophoribosylglycinam 20.6 2.5E+02 0.0087 22.8 6.6 88 114-206 5-98 (209)
392 2bhu_A Maltooligosyltrehalose 20.5 83 0.0028 30.7 4.2 29 201-229 191-219 (602)
393 1nu0_A Hypothetical protein YQ 20.5 1.2E+02 0.0041 22.9 4.3 58 170-227 39-100 (138)
394 3tla_A MCCF; serine protease, 20.3 2.4E+02 0.0081 25.4 6.9 25 365-389 314-338 (371)
395 1fob_A Beta-1,4-galactanase; B 20.2 3.2E+02 0.011 24.0 7.8 34 193-226 50-83 (334)
No 1
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=100.00 E-value=8.6e-54 Score=411.54 Aligned_cols=406 Identities=34% Similarity=0.696 Sum_probs=331.7
Q ss_pred CCCcCccccHHHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCC
Q 014603 9 GNQWGFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVG 88 (422)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g 88 (422)
.+.|++.++ .+...+.+.|+++++.+... ..++.++|+|++|+|+....+++++.+.+++.+.+.......|++..+
T Consensus 21 ~~~w~~~~~-~~~~~~~~~i~~~~~~~~~~--~~~~~~~i~l~~g~~~~~g~~~~~~~v~~a~~~~~~~~~~~~y~~~~g 97 (427)
T 3dyd_A 21 QSMWSVRPS-DMAKKTFNPIRAIVDNMKVK--PNPNKTMISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAPSIG 97 (427)
T ss_dssp ---CCCCCC-C----------------CCC--CCTTSCCEECCCSCTTTTSSSCCCHHHHHHHHHHHHHCCSSSCCCTTC
T ss_pred ccccCcchh-hHhhcccchHHHHHHHHhhc--ccCCCCEEeCCCcCCCccCCCCCCHHHHHHHHHHHhcCcCCCCCCCCC
Confidence 457888888 45555566799998766543 234678899999998754567889999999999988765668988889
Q ss_pred CHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCC
Q 014603 89 ILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKG 168 (422)
Q Consensus 89 ~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 168 (422)
.+++|+++++++.+. +..+++++|++|+|+++|++.++.+++++||+|+++.|+|+++...++..|.+++.++..++++
T Consensus 98 ~~~lr~~la~~~~~~-~~~~~~~~v~~t~g~t~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~ 176 (427)
T 3dyd_A 98 FLSSREEIASYYHCP-EAPLEAKDVILTSGCSQAIDLCLAVLANPGQNILVPRPGFSLYKTLAESMGIEVKLYNLLPEKS 176 (427)
T ss_dssp CHHHHHHHHHHHCBT-TBCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGT
T ss_pred cHHHHHHHHHHHhhc-CCCCChHHEEEecCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccC
Confidence 999999999999765 5567889999999999999999999999999999999999999999999999999999877677
Q ss_pred cccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeE
Q 014603 169 WEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVL 248 (422)
Q Consensus 169 ~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i 248 (422)
+.+|++.+++.++++++++++++|+||||.+++.+++++|+++|+++|+++|+||+|+.+.+++....++..++.+.+++
T Consensus 177 ~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~~~~~~~~~~vi 256 (427)
T 3dyd_A 177 WEIDLKQLEYLIDEKTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCKYEPLATLSTDVPIL 256 (427)
T ss_dssp TEECHHHHHSSCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCCGGGGCSSCCEE
T ss_pred CCCCHHHHHHHhccCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccCCCcCccHHHhCCCCcEE
Confidence 88999999999988899999999999999999999999999999999999999999999988877666777777666789
Q ss_pred EEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHH
Q 014603 249 TLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADI 328 (422)
Q Consensus 249 ~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~ 328 (422)
+++|+||.|+++|+|+||++++++.... .+++.+.+......+.+++.+.+.++.++|+.....++++.+++++++++.
T Consensus 257 ~~~S~sK~~~~~G~riG~~~~~~~~~~~-~~~i~~~l~~~~~~~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~~~~ 335 (427)
T 3dyd_A 257 SCGGLAKRWLVPGWRLGWILIHDRRDIF-GNEIRDGLVKLSQRILGPCTIVQGALKSILCRTPGEFYHNTLSFLKSNADL 335 (427)
T ss_dssp EEEESTTTSSCGGGCCEEEEEECSTTSS-HHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHH
T ss_pred EEeeccccCCCcCcceEEEEecCcchhh-HHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999997543222 135666776655445688899999999999864567889999999999999
Q ss_pred HHHHhhcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEeccChHHHHHHH
Q 014603 329 CCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALEDGL 408 (422)
Q Consensus 329 l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~l~~~~ 408 (422)
+.+.|+++|++. +..|.+|+|+|+.++....+...+..+++..+++++||.+.||..|+.++++||+++++++++++++
T Consensus 336 l~~~L~~~~g~~-~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~l~~~~gV~v~~g~~~~~~~~iRis~~~~~e~i~~~l 414 (427)
T 3dyd_A 336 CYGALAAIPGLR-PVRPSGAMYLMVGIEMEHFPEFENDVEFTERLVAEQSVHCLPATCFEYPNFIRVVITVPEVMMLEAC 414 (427)
T ss_dssp HHHHHHHSTTEE-EECCSBTTEEEEEECGGGCTTCSSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEESCSCHHHHHHHH
T ss_pred HHHHHhcCCCce-ecCCCeeEEEEEecCHhhcCCCCCHHHHHHHHHHHCCEEEECCcccCCCCeEEEEECCCHHHHHHHH
Confidence 999999998887 4478889999998874332222356788888877889999999999889999999999999999999
Q ss_pred HHHHHHHHHhcc
Q 014603 409 GRMKAFYDRHAK 420 (422)
Q Consensus 409 ~~l~~~~~~~~~ 420 (422)
++|.++++++++
T Consensus 415 ~~l~~~l~~~~~ 426 (427)
T 3dyd_A 415 SRIQEFCEQHYH 426 (427)
T ss_dssp HHHHHHHHHHCC
T ss_pred HHHHHHHHHhhc
Confidence 999999988753
No 2
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=100.00 E-value=9.5e-51 Score=389.49 Aligned_cols=403 Identities=29% Similarity=0.548 Sum_probs=327.1
Q ss_pred CcCccccHHHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCH
Q 014603 11 QWGFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGIL 90 (422)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~ 90 (422)
+|.+..++ ......+.++.+.+.+... ..+.++|+|+.|.|..++.+++++.+.+++.+++.......|++..+..
T Consensus 3 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~i~l~~g~p~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~ 78 (416)
T 1bw0_A 3 SWDVSMSN-HAGLVFNPIRTVSDNAKPS---PSPKPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFPTVGSP 78 (416)
T ss_dssp -CCCCCCH-HHHTCCCHHHHHHHTCCCC---CSCSCCEECCCCCTTTTSCSCCCHHHHHHHHHHHHTTCSSSCCCTTCCH
T ss_pred ccccCchh-hhhccccHHHHHHHHHHHh---hcCCCeEEecCcCCCcccCCCCCHHHHHHHHHHhhCCccCCcCCCCCCH
Confidence 58888884 5555556688877644332 1346789999999864445788999999999998765456798878899
Q ss_pred HHHHHHHHHHhh------cCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeecc
Q 014603 91 PARRAIADYLNR------DLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLL 164 (422)
Q Consensus 91 ~lr~~ia~~l~~------~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~ 164 (422)
++|+++++++++ ..|..+++++|++|+|++++++.++++++++||+|+++.|+|+++...++..|.+++.++.+
T Consensus 79 ~lr~~la~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~ 158 (416)
T 1bw0_A 79 EAREAVATWWRNSFVHKEELKSTIVKDNVVLCSGGSHGILMAITAICDAGDYALVPQPGFPHYETVCKAYGIGMHFYNCR 158 (416)
T ss_dssp HHHHHHHHHHHHHHCCSTTTGGGCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHHHHhhhcccccCCCCCCcceEEEeCChHHHHHHHHHHhCCCCCEEEEcCCCcHhHHHHHHHcCcEEEEeecC
Confidence 999999999982 24555788999999999999999999999999999999999999999999999999999886
Q ss_pred CCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCC----CCCCccc
Q 014603 165 PAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNT----PFVPMGV 240 (422)
Q Consensus 165 ~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~----~~~~~~~ 240 (422)
+++++.+|++.|++.++++++++++++|+||||.++|.+++++|+++|+++|++||+||+|..+.+++. ...++..
T Consensus 159 ~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~ 238 (416)
T 1bw0_A 159 PENDWEADLDEIRRLKDDKTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVAD 238 (416)
T ss_dssp GGGTTEECHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTS
T ss_pred cccCCCCCHHHHHHHhccCCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCccCHHH
Confidence 555677999999999988889999999999999999999999999999999999999999999888775 4445555
Q ss_pred cCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhhhccCcchHHHHHHHHHHhhchHHHHHHHHH
Q 014603 241 FGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITD 320 (422)
Q Consensus 241 ~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 320 (422)
+...+++++++|+||.|+++|+|+||++++++.... ..+...+........+++++.|+++.++|+...+.++++.++
T Consensus 239 ~~~~~~~i~~~s~sK~~~~~Glr~G~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 316 (416)
T 1bw0_A 239 FETTVPRVILGGTAKNLVVPGWRLGWLLYVDPHGNG--PSFLEGLKRVGMLVCGPCTVVQAALGEALLNTPQEHLDQIVA 316 (416)
T ss_dssp SCCSCCEEEEEESTTTTSCGGGCCEEEEEECTTCSC--HHHHHHHHHHHHHHTCSCHHHHHHHHHHHHSSCHHHHHHHHH
T ss_pred ccCCCcEEEEecchhhCCCCCceEEEEEeeCchhhH--HHHHHHHHHHhccccCCCcHHHHHHHHHHhcccHHHHHHHHH
Confidence 555556899999999999999999999997531111 234433333332345778899999999998544678889999
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEeccC
Q 014603 321 ILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAVE 400 (422)
Q Consensus 321 ~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~ 400 (422)
+++++++.+.+.|+++|++. +..|.+|+|+|+.++.....+..+..++...+++++||.+.||..|+.++++||+++++
T Consensus 317 ~~~~~~~~l~~~L~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~iRis~~~~ 395 (416)
T 1bw0_A 317 KIEESAMYLYNHIGECIGLA-PTMPRGAMYLMSRIDLEKYRDIKTDVEFFEKLLEEENVQVLPGTIFHAPGFTRLTTTRP 395 (416)
T ss_dssp HHHHHHHHHHHHHTTSTTEE-ECCCCBTTEEEEEECGGGBSSCCSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCSC
T ss_pred HHHHHHHHHHHHHHhCCCCc-ccCCCeeEEEEEeCCHHHcCCCCCHHHHHHHHHHHCCEEEecccccCCCCeEEEEecCC
Confidence 99999999999999988887 44677889999888643221112566777777767899999999888788999999988
Q ss_pred hHHHHHHHHHHHHHHHHhcc
Q 014603 401 PSALEDGLGRMKAFYDRHAK 420 (422)
Q Consensus 401 ~~~l~~~~~~l~~~~~~~~~ 420 (422)
++++++++++|.+++++..+
T Consensus 396 ~e~l~~~l~~l~~~l~~~~~ 415 (416)
T 1bw0_A 396 VEVYREAVERIKAFCQRHAA 415 (416)
T ss_dssp HHHHHHHHHHHHHHHHHHBC
T ss_pred HHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999987654
No 3
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=100.00 E-value=1.2e-50 Score=384.62 Aligned_cols=377 Identities=22% Similarity=0.392 Sum_probs=319.5
Q ss_pred ccHHHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHH
Q 014603 16 ANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRA 95 (422)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ 95 (422)
++.++...+.+.++.+.....+... .++++|+|+.|.+. +++++.+.+++.+.+... ...|++..|.+++|++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~lr~~ 76 (385)
T 1b5p_A 4 LSRRVQAMKPSATVAVNAKALELRR--QGVDLVALTAGEPD----FDTPEHVKEAARRALAQG-KTKYAPPAGIPELREA 76 (385)
T ss_dssp CCHHHHHCCCCHHHHHHHHHHHHHH--TTCCCEECCCSSCS----SCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHH
T ss_pred hhhHHhhcCcchHHHHHHHHHHHHh--cCCCEEEecCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHH
Confidence 5788999999999988876654422 36789999999865 566789999998888653 3578887889999999
Q ss_pred HHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHH
Q 014603 96 IADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDA 175 (422)
Q Consensus 96 ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~ 175 (422)
+++++++.+|..+++++|++|+|++++++.++++++++||+|+++.|+|+.+...++..|.+++.++.++++++.+|++.
T Consensus 77 ia~~~~~~~g~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~ 156 (385)
T 1b5p_A 77 LAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPER 156 (385)
T ss_dssp HHHHHHHTTCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCHHH
T ss_pred HHHHHHHHhCCCCChHHEEEcCChHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEeecCcccCCCCCHHH
Confidence 99999988887888999999999999999999999999999999999999999999999999999998754567899999
Q ss_pred HHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCcc
Q 014603 176 VEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISK 255 (422)
Q Consensus 176 l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK 255 (422)
+++.++++++++++++|+||||.++|.+++++|+++|+++|++||+||+|+.+.+++ ...++..+.. +++++++|+||
T Consensus 157 l~~~l~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~-~~~i~~~s~SK 234 (385)
T 1b5p_A 157 VRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEG-EHFSPGRVAP-EHTLTVNGAAK 234 (385)
T ss_dssp HHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSS-CCCCGGGTCT-TTEEEEEESTT
T ss_pred HHHhcCCCCEEEEEeCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEccchhcccCC-CCCCHHHcCC-CCEEEEEechh
Confidence 999998889999999999999999999999999999999999999999999988766 4445555544 67899999999
Q ss_pred ccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhhh-ccCcchHHHHHHHHHHhhc--hHHHHHHHHHHHHHHHHHHHHH
Q 014603 256 RWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQGAVPQILEKT--EEEFFSKITDILRETADICCDR 332 (422)
Q Consensus 256 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~~~l~~~ 332 (422)
.|+++|+|+||++++ +++++++...... +.+++.+.|.++.++|+.. ...++++.+++++++++.+.+.
T Consensus 235 ~~~~~G~RiG~~~~~--------~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ 306 (385)
T 1b5p_A 235 AFAMTGWRIGYACGP--------KEVIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEG 306 (385)
T ss_dssp TTTCGGGCCEEEECC--------HHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcCCcccceEEEEeC--------HHHHHHHHHHHhhccCCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999985 4677877766533 3467888999998888641 2467888999999999999999
Q ss_pred hhcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEeccChHHHHHHHHHHH
Q 014603 333 LKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALEDGLGRMK 412 (422)
Q Consensus 333 L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~l~~~~~~l~ 412 (422)
|+++ ++. +..|.+++|+|+.++.. + .+..++...++ ++||.+.||..|+.++++|||++++++++++++++|.
T Consensus 307 L~~~-g~~-~~~~~~~~~~~~~~~~~---~-~~~~~l~~~l~-~~gv~v~~g~~f~~~~~iRis~~~~~~~i~~~l~~l~ 379 (385)
T 1b5p_A 307 LTAL-GLK-AVRPSGAFYVLMDTSPI---A-PDEVRAAERLL-EAGVAVVPGTDFAAFGHVRLSYATSEENLRKALERFA 379 (385)
T ss_dssp HHHH-TCC-BCCCSBTTEEEEECTTT---C-SSHHHHHHHHH-HTTEECEESGGGTCTTEEEEECCSCHHHHHHHHHHGG
T ss_pred HHHC-CCe-ecCCCeeEEEEEecCCC---C-CCHHHHHHHHH-HCCeEEecccccCCCCeEEEEecCCHHHHHHHHHHHH
Confidence 9988 777 44788889999888631 1 25677777776 7799999999988788999999999999999999998
Q ss_pred HHHH
Q 014603 413 AFYD 416 (422)
Q Consensus 413 ~~~~ 416 (422)
++++
T Consensus 380 ~~l~ 383 (385)
T 1b5p_A 380 RVLG 383 (385)
T ss_dssp GGC-
T ss_pred HHHh
Confidence 7764
No 4
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=100.00 E-value=1.8e-49 Score=382.98 Aligned_cols=383 Identities=20% Similarity=0.315 Sum_probs=321.7
Q ss_pred CCCcCccccHHHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCC--CCCCCCCC
Q 014603 9 GNQWGFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSA--RFNCYSST 86 (422)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~ 86 (422)
...|.+.+++|+.....+.++.+++... ++++|+|+.|.|+. .+.+++.+.+++.+.+... ....|++.
T Consensus 47 ~~~~~~~~s~~~~~~~~s~~~~~~~~~~-------~~~~i~l~~g~p~~--~~~p~~~v~~a~~~~l~~~~~~~~~Y~~~ 117 (448)
T 3aow_A 47 LGDVERFFSKKALEMRASEVRELLKLVE-------TSDIISLAGGLPNP--KTFPKEIIRDILVEIMEKYADKALQYGTT 117 (448)
T ss_dssp TSCGGGGCCHHHHHCCCCHHHHHHHHHH-------TSSSEECCCCCCCG--GGSCHHHHHHHHHHHHHHSHHHHHSCCCT
T ss_pred ccchHHHhhHHHhcCCCcHHHHHHHhcc-------CCCcEeCCCCCCCc--hhCCHHHHHHHHHHHHHhhhHHHhCCCCC
Confidence 3568888999999999999999886432 46799999999762 3456789999998887653 13478888
Q ss_pred CCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCC
Q 014603 87 VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPA 166 (422)
Q Consensus 87 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 166 (422)
.|.+++|+++++++.+.+|.+ ++++|++|+|++++++.++++++++||+|+++.|+|+++...++..|.+++.++.+++
T Consensus 118 ~g~~~lr~~ia~~~~~~~g~~-~~~~v~~t~G~~~al~~~~~~l~~~Gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~ 196 (448)
T 3aow_A 118 KGFTPLRETLMKWLGKRYGIS-QDNDIMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLAALQAFNFYEPQYIQIPLDDE 196 (448)
T ss_dssp TCCHHHHHHHHHHHHHHHCCC-TTSEEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETT
T ss_pred CCcHHHHHHHHHHHHHhcCcC-ChhhEEEeCcHHHHHHHHHHHHcCCCCEEEEeCCChHHHHHHHHHcCCEEEEeccCCC
Confidence 899999999999997666655 7889999999999999999999999999999999999999999999999999988642
Q ss_pred CCcccCHHHHHHhhc----C--CceEE-EEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCcc
Q 014603 167 KGWEVDLDAVEALAD----E--NTVAL-VIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMG 239 (422)
Q Consensus 167 ~~~~~d~~~l~~~~~----~--~~~~i-~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~ 239 (422)
++|++.|++.++ + +++++ ++++|+||||.++|.+++++|+++|+++|++||+||+|+.+.+++....++.
T Consensus 197 ---g~d~~~L~~~l~~~~~~~~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~~~~~~ 273 (448)
T 3aow_A 197 ---GMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIK 273 (448)
T ss_dssp ---EECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCCCCCTG
T ss_pred ---CCCHHHHHHHHhhhhccCCCCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHH
Confidence 489999999887 5 67887 4679999999999999999999999999999999999999988776556666
Q ss_pred ccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhh-hccCcchHHHHHHHHHHhhch-HHHHHH
Q 014603 240 VFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQGAVPQILEKTE-EEFFSK 317 (422)
Q Consensus 240 ~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~-~~~~~~ 317 (422)
.++..++++++.||||.|+ +|+|+||++++ +++++++..... .+.+++.+.|.++.++|+... +.++++
T Consensus 274 ~~~~~~~vi~~~S~SK~~~-~GlriG~v~~~--------~~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~ 344 (448)
T 3aow_A 274 ALDNEGRVIYLGTFSKILA-PGFRIGWMVGD--------PGIIRKMEIAKQSTDLCTNVFGQVVAWRYVDGGYLEKHIPE 344 (448)
T ss_dssp GGCTTSCEEEEEESTTTTC-GGGCCEEEEEC--------HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHTTHHHHHHHH
T ss_pred hcCCCCCEEEEccchhhcc-ccccEEEEEeC--------HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhCCHHHHHHH
Confidence 6666667899999999987 99999999996 468888776553 345678899999999998642 577888
Q ss_pred HHHHHHHHHHHHHHHhhc-CC-CCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC----CC
Q 014603 318 ITDILRETADICCDRLKE-IP-CITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL----KD 391 (422)
Q Consensus 318 ~~~~~~~~~~~l~~~L~~-~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~----~~ 391 (422)
.++.++++++.+.+.|++ +| ++. +..|.+|+|+|++++.. .+..++...++++ ||.+.||..|+. .+
T Consensus 345 ~~~~~~~~~~~l~~~L~~~~~~g~~-~~~p~~g~~~~v~~~~~-----~~~~~l~~~l~~~-gV~v~pg~~f~~~~~~~~ 417 (448)
T 3aow_A 345 IRKFYKPRRDAMLEALEEFMPEGVK-WTKPEGGMFIWVTLPDG-----IDSKKMLERAIKK-GVAYVPGEAFYAHRDVKN 417 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCE-ECCCSBSSEEEEECSTT-----CCHHHHHHHHHHT-TEECEEGGGGSTTCCCCS
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCeE-EeCCCccEEEEEEcCCC-----CCHHHHHHHHHHC-CcEEEcchhhcCCCCCCC
Confidence 899999999999999987 57 576 44788899999999742 2567777777655 999999988743 57
Q ss_pred eEEEEecc-ChHHHHHHHHHHHHHHHHhcc
Q 014603 392 WLRITFAV-EPSALEDGLGRMKAFYDRHAK 420 (422)
Q Consensus 392 ~iRis~~~-~~~~l~~~~~~l~~~~~~~~~ 420 (422)
++|++++. +++++++++++|.++++++.+
T Consensus 418 ~iRls~~~~~~e~i~~~~~~L~~~l~~~~~ 447 (448)
T 3aow_A 418 TMRLNFTYVDEDKIMEGIKRLAETIKEELK 447 (448)
T ss_dssp EEEEECSSSCTHHHHHHHHHHHHHHHHHHC
T ss_pred EEEEEeCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 99999984 789999999999999988754
No 5
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=100.00 E-value=6.1e-49 Score=373.50 Aligned_cols=382 Identities=21% Similarity=0.379 Sum_probs=321.5
Q ss_pred ccHHHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHH
Q 014603 16 ANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRA 95 (422)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ 95 (422)
+++|+.....+.++.+.....+.. .+++++|||+.|.+. ++.++.+.+++.+.+... ...|++..+..++|++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~l~~~ 75 (388)
T 1j32_A 3 LAARVESVSPSMTLIIDAKAKAMK--AEGIDVCSFSAGEPD----FNTPKHIVEAAKAALEQG-KTRYGPAAGEPRLREA 75 (388)
T ss_dssp CCHHHHTSCCCSSTTTHHHHHHHH--TTTCCCEECCCSSCS----SCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHH
T ss_pred hhhHhHhCCccHHHHHHHHHHHHH--hcCCCEEECCCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHH
Confidence 577888888888888876555432 247889999999865 567889999999988653 3578888889999999
Q ss_pred HHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHH
Q 014603 96 IADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDA 175 (422)
Q Consensus 96 ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~ 175 (422)
+++++.+.+|..+++++|++|+|++++++.++++++++||+|++++|+|+++...++..|.+++.++.++++++.+|++.
T Consensus 76 la~~~~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~ 155 (388)
T 1j32_A 76 IAQKLQRDNGLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQ 155 (388)
T ss_dssp HHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEECCCGGGTTCCCHHH
T ss_pred HHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCEEEEecCCcccCCCCCHHH
Confidence 99999887777778899999999999999999999999999999999999999999999999999988654467789999
Q ss_pred HHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCC--CCCeEEEecC
Q 014603 176 VEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS--IVPVLTLGSI 253 (422)
Q Consensus 176 l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~--~~~~i~i~s~ 253 (422)
|++.++++++++++++|+||||.++|.+++++|+++|+++|+++|+|++|+.+.+++....++..+.. .++++++.|+
T Consensus 156 l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 235 (388)
T 1j32_A 156 IRQAITPKTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGF 235 (388)
T ss_dssp HHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEES
T ss_pred HHHhcCcCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHccccccCCEEEEeec
Confidence 99999888999999999999999999999999999999999999999999998887655445555443 3467999999
Q ss_pred ccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhh-hccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHH
Q 014603 254 SKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDR 332 (422)
Q Consensus 254 sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 332 (422)
||.++++|+|+||++++ +++++.+..... .+.+++.+.+.++.++|+.. +.++++.+++++++++.+.+.
T Consensus 236 sK~~~~~G~r~G~~~~~--------~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~ 306 (388)
T 1j32_A 236 AKTYAMTGWRVGFLAGP--------VPLVKAATKIQGHSTSNVCTFAQYGAIAAYENS-QDCVQEMLAAFAERRRYMLDA 306 (388)
T ss_dssp TTTTTCTTTCCEEEECC--------HHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHSC-SHHHHHHHHHHHHHHHHHHHH
T ss_pred hhccCCcccceEEEEeC--------HHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHHHHH
Confidence 99998899999999986 467777776553 33567788898888888743 467888899999999999999
Q ss_pred hhcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEeccChHHHHHHHHHHH
Q 014603 333 LKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALEDGLGRMK 412 (422)
Q Consensus 333 L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~l~~~~~~l~ 412 (422)
|+++|++. +..|.+++++|+.++.. + .+..++...+++++||.+.||..|+.++++|++++++++++++++++|.
T Consensus 307 L~~~~g~~-~~~~~~~~~~~~~~~~~---~-~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~i~~~~~~l~ 381 (388)
T 1j32_A 307 LNAMPGLE-CPKPDGAFYMFPSIAKT---G-RSSLDFCSELLDQHQVATVPGAAFGADDCIRLSYATDLDTIKRGMERLE 381 (388)
T ss_dssp HHTCTTCB-CCCCCBTTEECCBCGGG---T-CCHHHHHHHHHHHHCEECEEGGGGTCTTBEEEECCSCHHHHHHHHHHHH
T ss_pred HhhCCCCc-ccCCCeeEEEEEecCCC---C-CCHHHHHHHHHHhCCEEEeChhhhCCCCcEEEEecCCHHHHHHHHHHHH
Confidence 99988887 44677788888877531 1 2567777777666799999998887789999999999999999999999
Q ss_pred HHHHHh
Q 014603 413 AFYDRH 418 (422)
Q Consensus 413 ~~~~~~ 418 (422)
++++++
T Consensus 382 ~~l~~~ 387 (388)
T 1j32_A 382 KFLHGI 387 (388)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 998764
No 6
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=100.00 E-value=3.2e-49 Score=375.81 Aligned_cols=379 Identities=20% Similarity=0.341 Sum_probs=311.4
Q ss_pred cccHHHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHH
Q 014603 15 KANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARR 94 (422)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~ 94 (422)
+++ |+....++.++.+++...+.. .+++++|||+.|.+. ++++|.+.+++.+++.+. ...|++..|.+++|+
T Consensus 4 ~~~-~~~~~~~~~~~~~~~~~~~~~--~~g~~~i~l~~g~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~lr~ 75 (391)
T 3h14_A 4 KNS-SRSAVDPFIVMDVMEAARRAE--EAGRRIIHMEVGQPG----TGAPRGAVEALAKSLETD-ALGYTVALGLPALRQ 75 (391)
T ss_dssp CCC-STTCCCCCTTHHHHHHHHHHH--HTTCCCEECCCSSCS----SCSCHHHHHHHHHHHC-----------CCHHHHH
T ss_pred hhh-hHhhcCcchHHHHHHHHHHHH--hcCCCeEEccCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCChHHHHH
Confidence 445 778888888999887655432 257899999999965 577899999999988653 357888888999999
Q ss_pred HHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHH
Q 014603 95 AIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLD 174 (422)
Q Consensus 95 ~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 174 (422)
++++++++.+|.++++++|++|+|++++++.++++++++||+|+++.|+|+++...++..|.+++.++.++++++.+|++
T Consensus 76 ~ia~~~~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~ 155 (391)
T 3h14_A 76 RIARLYGEWYGVDLDPGRVVITPGSSGGFLLAFTALFDSGDRVGIGAPGYPSYRQILRALGLVPVDLPTAPENRLQPVPA 155 (391)
T ss_dssp HHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEECCGGGTTSCCHH
T ss_pred HHHHHHHHHhCCCCCHHHEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEeecCcccCCCCCHH
Confidence 99999998888788999999999999999999999999999999999999999999999999999999876666788999
Q ss_pred HHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCc
Q 014603 175 AVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSIS 254 (422)
Q Consensus 175 ~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~s 254 (422)
.+++. +++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++... ++..+ .+++++++|+|
T Consensus 156 ~l~~~---~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~--~~~~i~~~s~s 229 (391)
T 3h14_A 156 DFAGL---DLAGLMVASPANPTGTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAKAV-TALEL--TDECYVINSFS 229 (391)
T ss_dssp HHTTS---CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCC-CGGGT--CSSSEEEEESS
T ss_pred HHHhc---CCeEEEECCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEECcchhcccCCCCc-Chhhc--CCCEEEEEech
Confidence 99876 78899999999999999999999999999999999999999999988876532 22222 35689999999
Q ss_pred cccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhh-hccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHh
Q 014603 255 KRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRL 333 (422)
Q Consensus 255 K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L 333 (422)
|.++++|+|+||++++ +++.+.+..... .+.+++.+.+.++.++++ ...++++.+++++++++.+.+.|
T Consensus 230 K~~g~~G~r~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~--~~~~~~~~~~~~~~~~~~l~~~l 299 (391)
T 3h14_A 230 KYFSMTGWRVGWMVVP--------EDQVRVVERIAQNMFICAPHASQVAALAALD--CDAELQANLDVYKANRKLMLERL 299 (391)
T ss_dssp STTCCTTSCCEEEECC--------GGGHHHHHHHHHHTTCCCCHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hccCCccceeEEEEeC--------HHHHHHHHHHHhhhccCCCHHHHHHHHHHhC--ChHHHHHHHHHHHHHHHHHHHHH
Confidence 9998899999999986 457777776654 345778889999888887 36788999999999999999999
Q ss_pred hcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC---CCeEEEEeccChHHHHHHHHH
Q 014603 334 KEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL---KDWLRITFAVEPSALEDGLGR 410 (422)
Q Consensus 334 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~---~~~iRis~~~~~~~l~~~~~~ 410 (422)
++++... ...|.+++++|+.++... .+..++...+++++||.+.||..|+. .+++||+++.+++++++++++
T Consensus 300 ~~~~~~~-~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~iRis~~~~~~~i~~~l~~ 374 (391)
T 3h14_A 300 PKAGFTR-IAPPDGAFYVYADVSDLT----DDSRAFAAEILEKAGVAVTPGLDFDPERGAGTLRFSYARATADIEEGLDR 374 (391)
T ss_dssp HHHTCCC-BCCCCBTTEEEEECTTTC----SCHHHHHHHHHHHHCEECEEGGGTCTTTGGGEEEEECCSCHHHHHHHHHH
T ss_pred HHcCCCc-ccCCCeeEEEEEecCccC----CCHHHHHHHHHHHCCEEEcCchhhCCCCCCCeEEEEecCCHHHHHHHHHH
Confidence 9884333 446788899999886421 25677888877777999999998876 679999999888999999999
Q ss_pred HHHHHHHhcccC
Q 014603 411 MKAFYDRHAKKQ 422 (422)
Q Consensus 411 l~~~~~~~~~~~ 422 (422)
|++++++...+|
T Consensus 375 l~~~~~~~~~~~ 386 (391)
T 3h14_A 375 LEAFMQARGEGH 386 (391)
T ss_dssp HHHHHHHC----
T ss_pred HHHHHHHhcccc
Confidence 999999876654
No 7
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=100.00 E-value=2.2e-49 Score=380.74 Aligned_cols=382 Identities=21% Similarity=0.385 Sum_probs=323.6
Q ss_pred ccccHHHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCC-CCCCCCCCCCHHH
Q 014603 14 FKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSAR-FNCYSSTVGILPA 92 (422)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~y~~~~g~~~l 92 (422)
+.+++|+...+++.++.+.+.. .+.++|+|+.|.|. +++++.+.+++.+++.... ...|++..+.+++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~-------~~~~~i~l~~g~~~----~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~l 72 (422)
T 3fvs_A 4 QLQARRLDGIDYNPWVEFVKLA-------SEHDVVNLGQGFPD----FPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPL 72 (422)
T ss_dssp CCSCGGGTTCCCCHHHHHHHHH-------HTSCCEECCCSSCS----SCCCHHHHHHHHHHHHSCGGGGSCCCTTCCHHH
T ss_pred hhHHHHhhccCccHHHHHHHHh-------hcCCceEeCCCCCC----CCCCHHHHHHHHHHHhCCCccCCCCCCCCCHHH
Confidence 4568899999999999888644 34689999999965 6788999999999987643 4589888899999
Q ss_pred HHHHHHHHhhcCCCCCCC-CCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccC------
Q 014603 93 RRAIADYLNRDLPYKLSP-DDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLP------ 165 (422)
Q Consensus 93 r~~ia~~l~~~~~~~~~~-~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~------ 165 (422)
|+++++++++.+|..+++ ++|++|+|++++++.++++++++||+|+++.|+|+++...++..|.+++.+++++
T Consensus 73 r~~la~~~~~~~g~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~G 152 (422)
T 3fvs_A 73 TKILASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNG 152 (422)
T ss_dssp HHHHHHHHHHHHTCCCCHHHHEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCCCSS
T ss_pred HHHHHHHHHHhhCCCCCCCCcEEEECChHHHHHHHHHHHcCCCCEEEEcCCCchhhHHHHHHcCCEEEEEeccccccccc
Confidence 999999999888877888 7999999999999999999999999999999999999999999999999999875
Q ss_pred ----CCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCcccc
Q 014603 166 ----AKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF 241 (422)
Q Consensus 166 ----~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~ 241 (422)
..++.+|++.+++.++++++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++....++..+
T Consensus 153 ~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~ 232 (422)
T 3fvs_A 153 ELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASL 232 (422)
T ss_dssp SCCBGGGSBCCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGS
T ss_pred ccccccCCCCCHHHHHhhcCCCceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCChhhc
Confidence 2356789999999998899999999999999999999999999999999999999999999998887666666655
Q ss_pred CC-CCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhh-hccCcchHHHHHHHHHHhh------chHH
Q 014603 242 GS-IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQGAVPQILEK------TEEE 313 (422)
Q Consensus 242 ~~-~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~------~~~~ 313 (422)
.. .++++++.|+||.|+++|+|+||++++ +++++.+..... ...+++++.+.++.++++. ..+.
T Consensus 233 ~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~ 304 (422)
T 3fvs_A 233 PGMWERTLTIGSAGKTFSATGWKVGWVLGP--------DHIMKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQPSS 304 (422)
T ss_dssp TTTGGGEEEEEEHHHHHTCGGGCCEEEECC--------HHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHTTTCTTC
T ss_pred ccccCcEEEEecchhccCCccceEEEEEeC--------HHHHHHHHHHHhhccCCCCcHHHHHHHHHHhhccccccchHH
Confidence 43 357899999999998999999999986 467777766553 3457788999999998874 1246
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccccCCCC---------HHHHHHHHHHhcCeEEecC
Q 014603 314 FFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINS---------DMEFALKLAKEESVIVLPG 384 (422)
Q Consensus 314 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~---------~~~~~~~l~~~~gi~v~~g 384 (422)
++++.+++++++++.+.+.|+++ ++. +..|.+++|+|+.++..... ..+ ..++...+++++||.+.||
T Consensus 305 ~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g 381 (422)
T 3fvs_A 305 YFVQFPQAMQRCRDHMIRSLQSV-GLK-PIIPQGSYFLITDISDFKRK-MPDLPGAVDEPYDRRFVKWMIKNKGLVAIPV 381 (422)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTT-TCE-EEBCSBSSEEEEECHHHHHH-CCCCCCCTTCCHHHHHHHHHHHHHCEECEEG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHc-CCe-ecCCCeeeEEEEechhhccc-ccccccccccccHHHHHHHHHHhcCEEEeCc
Confidence 78889999999999999999998 776 44788899999988642110 001 4577777788889999999
Q ss_pred CCCCC-------CCeEEEEeccChHHHHHHHHHHHHHHHH
Q 014603 385 ITVGL-------KDWLRITFAVEPSALEDGLGRMKAFYDR 417 (422)
Q Consensus 385 ~~~~~-------~~~iRis~~~~~~~l~~~~~~l~~~~~~ 417 (422)
..|+. .+++||+++.++++|++++++|++++++
T Consensus 382 ~~f~~~~~~~~~~~~iRis~~~~~e~i~~~l~~l~~~l~~ 421 (422)
T 3fvs_A 382 SIFYSVPHQKHFDHYIRFCFVKDEATLQAMDEKLRKWKVE 421 (422)
T ss_dssp GGGSCHHHHTTSCSEEEEECCCCHHHHHHHHHHHHHHHHC
T ss_pred HHhcCCcCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHhh
Confidence 98853 6899999999999999999999998864
No 8
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=100.00 E-value=1.4e-48 Score=372.24 Aligned_cols=382 Identities=21% Similarity=0.353 Sum_probs=313.8
Q ss_pred ccccHHHhhc--cCccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCC---CCCCCCCCC
Q 014603 14 FKANEELKTA--SGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSAR---FNCYSSTVG 88 (422)
Q Consensus 14 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~---~~~y~~~~g 88 (422)
+.+++|+.+. .++.+++++....+......+.++|||+.|.|. +++++.+.+++.+.+.+.. ...|++..+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~~y~~~~g 77 (398)
T 3ele_A 2 MVVNESMYQLGSVRSAIRELFEYGKKRAAIVGKENVYDFSIGNPS----IPAPQIVNDTIKELVTDYDSVALHGYTSAQG 77 (398)
T ss_dssp CSSCHHHHHHHHCCCHHHHHHHHHHHHHHHHCGGGCEECCSCCCC----SCCCHHHHHHHHHHHHHSCHHHHHSCCCTTC
T ss_pred cchhHHHhccccCchhHHHHHHHHHHHHhhcCCCCeEEeecCCCC----CCCCHHHHHHHHHHHhcCCccccCCcCCCCC
Confidence 4578899998 688999998766655444456789999999755 5678999999999887632 357888889
Q ss_pred CHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCC-CEEEecCCCccchHHHHhhCCCeEEEeeccCCC
Q 014603 89 ILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPG-ANILLPRPGFPYYEARATHSHLEVRHFDLLPAK 167 (422)
Q Consensus 89 ~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g-d~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 167 (422)
.+++|+++++++.+.+|.++++++|++|+|++++++.++++++++| |+|+++.|+|+++...++..|.+++.++.++ +
T Consensus 78 ~~~lr~~la~~l~~~~g~~~~~~~i~~~~g~~~al~~~~~~l~~~g~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~-~ 156 (398)
T 3ele_A 78 DVETRAAIAEFLNNTHGTHFNADNLYMTMGAAASLSICFRALTSDAYDEFITIAPYFPEYKVFVNAAGARLVEVPADT-E 156 (398)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCCSTTCEEEEESSCCTHHHHHHHHTTCEEEEECCCT-T
T ss_pred cHHHHHHHHHHHHHHhCCCCChHHEEEccCHHHHHHHHHHHHcCCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCC-c
Confidence 9999999999999888888899999999999999999999999999 9999999999999999999999999999864 3
Q ss_pred CcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHH------cCcEEEEcccccccccCCCCCCCcccc
Q 014603 168 GWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKK------LGIMVIADEVYDHLAFGNTPFVPMGVF 241 (422)
Q Consensus 168 ~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~------~~~~li~D~~~~~~~~~~~~~~~~~~~ 241 (422)
++.+|++.|++.++++++++++++|+||||.+++.+++++|+++|++ +|+++|+||+|+.+.+++.......
T Consensus 157 ~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~-- 234 (398)
T 3ele_A 157 HFQIDFDALEERINAHTRGVIINSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVT-- 234 (398)
T ss_dssp TSSCCHHHHHHTCCTTEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCCCGG--
T ss_pred CCcCCHHHHHHHhCcCCCEEEEcCCCCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCCCCcCChH--
Confidence 67899999999998899999999999999999999999999999999 9999999999999888764433322
Q ss_pred CCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhhh--ccCcchHHHHHHHHHHhhchHHHHHHHH
Q 014603 242 GSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI--SSDPATFIQGAVPQILEKTEEEFFSKIT 319 (422)
Q Consensus 242 ~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~ 319 (422)
...++++++.|+||.|+++|+|+||+++++.. ....++...+...... +.+++.+.+.++..+++... .+
T Consensus 235 ~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~------~~ 306 (398)
T 3ele_A 235 KYYDNTLVCYSYSKSLSLPGERIGYVLVPDEV--YDKAELYAAVCGAGRALGYVCAPSLFQKMIVKCQGATG------DI 306 (398)
T ss_dssp GTCSSEEEEEESTTTSSCTTTCCEEEECCTTS--TTHHHHHHHHHHHHHHTTCCCSCHHHHHHHTTCTTCCC------CH
T ss_pred hhcCCeEEEEehhhcCCCccceeEEEEEcchh--hhHHHHHHHHHHHhhhccccCCCHHHHHHHHHHhcCHH------HH
Confidence 22357899999999998899999999987421 1111234444333322 34566788888877776532 35
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecc
Q 014603 320 DILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAV 399 (422)
Q Consensus 320 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~ 399 (422)
++++++++.+.+.|+++ ++. +..|.+++++|+.++.. +..++...+ .++||.+.||..|+.++++||++++
T Consensus 307 ~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~~~------~~~~~~~~l-~~~gi~v~~g~~~~~~~~iRis~~~ 377 (398)
T 3ele_A 307 NAYKENRDLLYEGLTRI-GYH-CFKPDGAFYMFVKALED------DSNAFCEKA-KEEDVLIVAADGFGCPGWVRISYCV 377 (398)
T ss_dssp HHHHHHHHHHHHHHHHH-TCC-EECCSBSSEEEEECSSS------CHHHHHHHH-HTTTEECEESGGGTCTTEEEEECCS
T ss_pred HHHHHHHHHHHHHHHHc-CCe-ecCCCeeEEEEEEcCCC------CHHHHHHHH-HHCCEEEeCccccCCCCeEEEEecC
Confidence 67788888888888887 676 44788888899988742 466666654 6779999999999888999999999
Q ss_pred ChHHHHHHHHHHHHHHHHhc
Q 014603 400 EPSALEDGLGRMKAFYDRHA 419 (422)
Q Consensus 400 ~~~~l~~~~~~l~~~~~~~~ 419 (422)
+++++++++++|++++++++
T Consensus 378 ~~e~i~~~l~~l~~~l~~~~ 397 (398)
T 3ele_A 378 DREMIKHSMPAFEKIYKKYN 397 (398)
T ss_dssp CHHHHHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999998875
No 9
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=100.00 E-value=6e-48 Score=366.77 Aligned_cols=379 Identities=24% Similarity=0.459 Sum_probs=317.9
Q ss_pred cccHHHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHH
Q 014603 15 KANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARR 94 (422)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~ 94 (422)
++++|+..++++.++.+.....+. +++|+|+.|.+. +++++.+.+++.+.+... ...|++..+..++|+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~------~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~l~~ 70 (389)
T 1gd9_A 2 ALSDRLELVSASEIRKLFDIAAGM------KDVISLGIGEPD----FDTPQHIKEYAKEALDKG-LTHYGPNIGLLELRE 70 (389)
T ss_dssp CHHHHHHHSCCCHHHHHHHHHHTC------SSCEECCCCSCS----SCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHH
T ss_pred chhhHhHhCChhHHHHHHHHHhhh------cCeEecCCCCCC----CCCCHHHHHHHHHHHhCC-CCCCCCCCCcHHHHH
Confidence 457789999999999988755432 578999999865 467899999999988764 347888778999999
Q ss_pred HHHHHHhhcCCCCCCCCC-EEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCH
Q 014603 95 AIADYLNRDLPYKLSPDD-VYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDL 173 (422)
Q Consensus 95 ~ia~~l~~~~~~~~~~~~-i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~ 173 (422)
++++++.+.+|..+++++ |++|+|++++++.++++++++||+|++++|+|+++...++..|.+++.++.++++++.+|+
T Consensus 71 ~la~~~~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~ 150 (389)
T 1gd9_A 71 AIAEKLKKQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEFRLNV 150 (389)
T ss_dssp HHHHHHHHHHCCCCCTTTSEEEESSTTHHHHHHHTTTCCTTCEEEEEESCCTTHHHHHHHHTCEEEEEECCGGGTTCCCH
T ss_pred HHHHHHHHHhCCCCCCCCeEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHCCCEEEEeccCCccCCCCCH
Confidence 999999877676678889 9999999999999999999999999999999999999999999999999986544677899
Q ss_pred HHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCC-CCCeEEEec
Q 014603 174 DAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IVPVLTLGS 252 (422)
Q Consensus 174 ~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~-~~~~i~i~s 252 (422)
+.|++.++++++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++....++..+.. .++++++.|
T Consensus 151 ~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s 230 (389)
T 1gd9_A 151 DELKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNG 230 (389)
T ss_dssp HHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEE
T ss_pred HHHHHhcCcCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccCCCCCEEEEec
Confidence 9999999888899999999999999999999999999999999999999999998876653344444432 356799999
Q ss_pred CccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhh-hccCcchHHHHHHHHHHhhch-HHHHHHHHHHHHHHHHHHH
Q 014603 253 ISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQGAVPQILEKTE-EEFFSKITDILRETADICC 330 (422)
Q Consensus 253 ~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~ 330 (422)
+||.++++|+|+||++++ +++++++..... .+.+++.+.+.++.++|+... +.++++.+++++++++.+.
T Consensus 231 ~sK~~~~~G~r~G~~~~~--------~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~ 302 (389)
T 1gd9_A 231 FSKTFAMTGWRLGFVAAP--------SWIIERMVKFQMYNATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVW 302 (389)
T ss_dssp STTTTTCGGGCCEEEECC--------HHHHHHHHHHHTTTTCSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChhhcCCcccceEEEEEC--------HHHHHHHHHHHhhhccCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHH
Confidence 999998899999999986 467787776553 345778899999999998532 2378889999999999999
Q ss_pred HHhhcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEeccChHHHHHHH
Q 014603 331 DRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAVEPSALEDGL 408 (422)
Q Consensus 331 ~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRis~~~~~~~l~~~~ 408 (422)
+.|+++ ++. +..|.+++++|+.++.. + .+..++...+++++||.+.||..|+. .+++||+++.+++++++++
T Consensus 303 ~~L~~~-g~~-~~~~~~~~~~~~~~~~~---~-~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~i~~~l 376 (389)
T 1gd9_A 303 KRLNEM-GLP-TVKPKGAFYIFPRIRDT---G-LTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYATAYEKLEEAM 376 (389)
T ss_dssp HHHHHT-TCC-CCCCCBTTEECCBCGGG---T-CCHHHHHHHHHHHTCEECEEGGGGCGGGTTBEEEECCSCHHHHHHHH
T ss_pred HHHHHc-CCe-ecCCCeeeEEEEeccCC---C-CCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecCCHHHHHHHH
Confidence 999998 777 44677788899888631 1 15667777776578999999988764 6799999998899999999
Q ss_pred HHHHHHHHHh
Q 014603 409 GRMKAFYDRH 418 (422)
Q Consensus 409 ~~l~~~~~~~ 418 (422)
++|.+++++.
T Consensus 377 ~~l~~~~~~~ 386 (389)
T 1gd9_A 377 DRMERVLKER 386 (389)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHhc
Confidence 9999998764
No 10
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=100.00 E-value=5.4e-48 Score=369.81 Aligned_cols=385 Identities=20% Similarity=0.322 Sum_probs=303.8
Q ss_pred ccHHHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHH
Q 014603 16 ANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRA 95 (422)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ 95 (422)
++.++..++.+.++.+.....+. . .++.++|||+.|.+. +++++.+.+++.+++.......|++..+..++|++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~-~-~~g~~~idl~~g~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ 83 (412)
T 2x5d_A 10 RFARIDRLPPYVFNITAELKMAA-R-RRGEDIIDLSMGNPD----GPTPPHIVEKLCTVAQREDTHGYSTSRGIPRLRRA 83 (412)
T ss_dssp -----------CHHHHHHHHHHH-H-HTTCCCEECSSCCCC----SCCCHHHHHHHHHTC---------CTTCCHHHHHH
T ss_pred hhHHHhhcCchHHHHHHHHHHHH-h-hcCCCEEecCCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHH
Confidence 56677777777787776544322 1 257889999999864 46789999999998865434578877889999999
Q ss_pred HHHHHhhcCCCCCCC-CCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHH
Q 014603 96 IADYLNRDLPYKLSP-DDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLD 174 (422)
Q Consensus 96 ia~~l~~~~~~~~~~-~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 174 (422)
+++++.+.+|..+++ ++|++|+|++++++.++++++++||+|+++.|+|+++...++..|.+++.++.++++++.+|++
T Consensus 84 ia~~~~~~~g~~~~~~~~v~~t~g~~~a~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 163 (412)
T 2x5d_A 84 ISHWYRDRYDVQIDPESEAIVTIGSKEGLAHLMLATLDHGDTILVPNPSYPIHIYGAVIAGAQVRSVPLVPGIDFFNELE 163 (412)
T ss_dssp HHHHHHHHHCCCCCTTTSEEEESCHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHHTCEEEEEECSTTSCHHHHHH
T ss_pred HHHHHHHHhCCCCCCCcCEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEeecCCccCCCCCHH
Confidence 999998776766777 7999999999999999999999999999999999999999999999999999875446668899
Q ss_pred HHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCC-CCCeEEEecC
Q 014603 175 AVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IVPVLTLGSI 253 (422)
Q Consensus 175 ~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~-~~~~i~i~s~ 253 (422)
.|++.++++++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.++|....++..+.. .++++++.|+
T Consensus 164 ~l~~~i~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~ 243 (412)
T 2x5d_A 164 RAIRESIPKPRMMILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTL 243 (412)
T ss_dssp HHHHTEESCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTGGGTEEEEEEC
T ss_pred HHHHhcccCceEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhhccCccCcEEEEecC
Confidence 999998888899999999999999999999999999999999999999999998886654445555532 3568999999
Q ss_pred ccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhh-hccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHH
Q 014603 254 SKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDR 332 (422)
Q Consensus 254 sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 332 (422)
||.|+++|+|+||++++ +++++.+..... .+.+++.+.+.++.++|+.. +.++++.+++++++++.+.+.
T Consensus 244 sK~~~~~G~r~G~~~~~--------~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~ 314 (412)
T 2x5d_A 244 SKSYNMAGWRIGFMVGN--------PELVSALARIKSYHDYGTFTPLQVAAIAALEGD-QQCVRDIARQYQQRRDVLVKG 314 (412)
T ss_dssp C-CCSCTTSCCEEEEEC--------HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHSC-SHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCcccceEEEEcC--------HHHHHHHHHHHhhhccCCCHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHH
Confidence 99998899999999985 567887776553 34577889999999999753 367888999999999999999
Q ss_pred hhcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEeccChHHHHHHHHH
Q 014603 333 LKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAVEPSALEDGLGR 410 (422)
Q Consensus 333 L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRis~~~~~~~l~~~~~~ 410 (422)
|+++ ++. +..+.+|+|+|+.++... .. .+..++...+++++||.+.||..|+. .+++||+++.+++++++++++
T Consensus 315 L~~~-g~~-~~~~~~g~~~~~~~~~~~-~~-~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~~~~~l~~~l~~ 390 (412)
T 2x5d_A 315 LREA-GWM-VENPKASMYVWAKIPEPY-AH-LGSLEFAKKLLQDAKVSVSPGIGFGDYGDDHVRFALIENRDRLRQAVRG 390 (412)
T ss_dssp HHHH-TCC-CCCCSBSSEEEEECCTTT-GG-GCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHH
T ss_pred HHHC-CCE-ecCCCeeeEEEEEcCCcc-CC-CCHHHHHHHHHHHCCEEEeCchhhCCCCCCeEEEEecCCHHHHHHHHHH
Confidence 9987 777 446777889999886321 00 13567777776767999999988864 679999999889999999999
Q ss_pred HHHHHHHhc
Q 014603 411 MKAFYDRHA 419 (422)
Q Consensus 411 l~~~~~~~~ 419 (422)
|.+++++..
T Consensus 391 l~~~l~~~~ 399 (412)
T 2x5d_A 391 IKAMFRADG 399 (412)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHhcC
Confidence 999998754
No 11
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=100.00 E-value=6.7e-48 Score=367.32 Aligned_cols=372 Identities=21% Similarity=0.352 Sum_probs=312.8
Q ss_pred cHHHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHH
Q 014603 17 NEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAI 96 (422)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~i 96 (422)
++++...+++.++.+...... ....+++++|||+.|++. ++.++.+.+++.+.+.. ...|++..|.+++|+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~--~~~y~~~~g~~~lr~~l 75 (396)
T 3jtx_A 3 NTLLKQLKPYPFARLHEAMQG-ISAPEGMEAVPLHIGEPK----HPTPKVITDALTASLHE--LEKYPLTAGLPELRQAC 75 (396)
T ss_dssp HHHHHHCCSCHHHHHHHHTTT-CCCCTTCCCEECSCCSCC----SCCCHHHHHHHHHTGGG--GGSCCCTTCCHHHHHHH
T ss_pred hhhhccCCCChHHHHHHHHHh-hhhccCCCeEEeCCcCCC----CCCCHHHHHHHHHHhhh--ccCCCCCCCcHHHHHHH
Confidence 457788888888888764443 333468899999999955 67889999999998753 45798888899999999
Q ss_pred HHHHhhcCCCC-CCCC-CEEEecCHHHHHHHHHHHhcCCC-----CEEEecCCCccchHHHHhhCCCeEEEeeccCCCCc
Q 014603 97 ADYLNRDLPYK-LSPD-DVYLTLGCTQAIEVILTVLARPG-----ANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGW 169 (422)
Q Consensus 97 a~~l~~~~~~~-~~~~-~i~~~~g~~~a~~~~~~~l~~~g-----d~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 169 (422)
++++.+.+|.. ++++ +|++|+|++++++.++++++++| |+|+++.|+|+++...++..|.+++.+++ +.+++
T Consensus 76 a~~l~~~~g~~~~~~~~~i~~t~g~~~al~~~~~~~~~~g~~~~~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~-~~~g~ 154 (396)
T 3jtx_A 76 ANWLKRRYDGLTVDADNEILPVLGSREALFSFVQTVLNPVSDGIKPAIVSPNPFYQIYEGATLLGGGEIHFANC-PAPSF 154 (396)
T ss_dssp HHHHHHHTTTCCCCTTTSEEEESSHHHHHHHHHHHHCCC---CCCCEEEEEESCCHHHHHHHHHTTCEEEEEEC-CTTTC
T ss_pred HHHHHHhcCCCCCCCCCeEEEcCCcHHHHHHHHHHHhCCCCccCCCEEEEcCCCcHhHHHHHHHcCCEEEEeec-CCCCC
Confidence 99999888766 7788 99999999999999999999996 79999999999999999999999999998 44567
Q ss_pred ccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccc----cC-CC
Q 014603 170 EVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGV----FG-SI 244 (422)
Q Consensus 170 ~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~----~~-~~ 244 (422)
.+|++.|++.++++++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++..+..... +. ..
T Consensus 155 ~~d~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (396)
T 3jtx_A 155 NPDWRSISEEVWKRTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSR 234 (396)
T ss_dssp CCCGGGSCHHHHHTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCCHHHHHHHTTCCC
T ss_pred ccCHHHHHHhhccCcEEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCchHHhhhhhccccc
Confidence 78999999988888999999999999999999999999999999999999999999998887633222211 11 23
Q ss_pred CCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhh-hccCcchHHHHHHHHHHhhchHHHHHHHHHHHH
Q 014603 245 VPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQGAVPQILEKTEEEFFSKITDILR 323 (422)
Q Consensus 245 ~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 323 (422)
++++++.|+||.|+++|+|+||++++ +++++.+..... .+.+++.+.+.++.++++. +.++.+.+++++
T Consensus 235 ~~~i~~~s~sK~~~~~G~r~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~ 304 (396)
T 3jtx_A 235 QKLLMFTSLSKRSNVPGLRSGFVAGD--------AELLKNFLLYRTYHGSAMSIPVQRASIAAWDD--EQHVIDNRRLYQ 304 (396)
T ss_dssp TTEEEEEESTTTSSCGGGCCEEEEEC--------HHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHC--CHHHHHHHHHHH
T ss_pred CcEEEEeccccccCCcccceEEEEeC--------HHHHHHHHHHHhhcccCCCHHHHHHHHHHhCC--HHHHHHHHHHHH
Confidence 56899999999989999999999885 578888877654 3457888999999999975 467888999999
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC--------CCeEEE
Q 014603 324 ETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL--------KDWLRI 395 (422)
Q Consensus 324 ~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--------~~~iRi 395 (422)
++++.+.+.|+++ +. +..|.+++|+|+.++.. +..++...+++++||.+.||..|+. .+++||
T Consensus 305 ~~~~~l~~~l~~~--~~-~~~~~~~~~~~~~~~~~------~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~~~~~iRi 375 (396)
T 3jtx_A 305 EKFERVIPILQQV--FD-VKLPDASFYIWLKVPDG------DDLAFARNLWQKAAIQVLPGRFLARDTEQGNPGEGYVRI 375 (396)
T ss_dssp HHHHHHHHHHTTT--SC-CCCCSSSSEEEEECTTS------CHHHHHHHHHHHHCEECEEGGGGCCCCTTCCTTTTEEEE
T ss_pred HHHHHHHHHHHhc--CC-ccCCCeeEEEEEECCCC------CHHHHHHHHHHHCCEEEeCChHhCCcccccCCCCCeEEE
Confidence 9999999999886 33 33678899999998752 5677888887778999999998864 579999
Q ss_pred EeccChHHHHHHHHHHHHHH
Q 014603 396 TFAVEPSALEDGLGRMKAFY 415 (422)
Q Consensus 396 s~~~~~~~l~~~~~~l~~~~ 415 (422)
+++.+++++++++++|.+++
T Consensus 376 s~~~~~~~i~~~l~~l~~~l 395 (396)
T 3jtx_A 376 ALVADVATCVKAAEDIVSLY 395 (396)
T ss_dssp ECCSCHHHHHHHHHHHHHHC
T ss_pred EEcCCHHHHHHHHHHHHHHh
Confidence 99989999999999998864
No 12
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=2.4e-47 Score=362.51 Aligned_cols=372 Identities=24% Similarity=0.406 Sum_probs=313.7
Q ss_pred ccHHHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHH
Q 014603 16 ANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRA 95 (422)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ 95 (422)
.+.|+..++.+.++.+.....+... .++++|+|+.|.+. ++.++.+.+++.+.+... ...|++..+..++|++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~lr~~ 86 (389)
T 1o4s_A 14 VSRRISEIPISKTMELDAKAKALIK--KGEDVINLTAGEPD----FPTPEPVVEEAVRFLQKG-EVKYTDPRGIYELREG 86 (389)
T ss_dssp CCHHHHHSCCCSSHHHHHHHHHHHH--TTCCCEECCCSSCS----SCCCHHHHHHHHHHHTTC-CCCCCCTTCCHHHHHH
T ss_pred HHHHHhhcCccHHHHHHHHHHHHHh--cCCCEEEccCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHH
Confidence 4668999999999998876655432 47789999999864 456799999999988653 3478877789999999
Q ss_pred HHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHH
Q 014603 96 IADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDA 175 (422)
Q Consensus 96 ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~ 175 (422)
+++++.+.+|..+++++|++|+|++++++.++++++++||+|++++|+|+++...++..|.+++.++.++++++.+|++.
T Consensus 87 la~~~~~~~g~~~~~~~v~~~~g~t~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~ 166 (389)
T 1o4s_A 87 IAKRIGERYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEE 166 (389)
T ss_dssp HHHHHHHHHTCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCGGGTTCCCHHH
T ss_pred HHHHHHHHhCCCCCHHHEEEecCHHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecCCccCCCCCHHH
Confidence 99999877676678899999999999999999999999999999999999999999999999999998654467789999
Q ss_pred HHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCC-CCCeEEEecCc
Q 014603 176 VEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IVPVLTLGSIS 254 (422)
Q Consensus 176 l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~-~~~~i~i~s~s 254 (422)
|++.++++++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++. ..++..+.. .++++++.|+|
T Consensus 167 l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g~-~~~~~~~~~~~~~~i~~~s~s 245 (389)
T 1o4s_A 167 VEGLLVGKTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDE-FTSILDVSEGFDRIVYINGFS 245 (389)
T ss_dssp HHHTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSC-CCCHHHHCSSSTTEEEEEEST
T ss_pred HHHhcccCceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCC-CCCHhhcCCCCCcEEEEeech
Confidence 9999988899999999999999999999999999999999999999999998877652 234444432 35679999999
Q ss_pred cccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhh-hccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHh
Q 014603 255 KRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRL 333 (422)
Q Consensus 255 K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L 333 (422)
|+++++|+|+||++++ +++++.+..... .+.+++.+.+.++.++|+.. +++.+++++++++.+.+.|
T Consensus 246 K~~~~~G~r~G~l~~~--------~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~----~~~~~~~~~~~~~~l~~~L 313 (389)
T 1o4s_A 246 KSHSMTGWRVGYLISS--------EKVATAVSKIQSHTTSCINTVAQYAALKALEVD----NSYMVQTFKERKNFVVERL 313 (389)
T ss_dssp TTTTCGGGCCEEEECC--------HHHHHHHHHHHHHHTCSCCHHHHHHHHHHTTCC----CHHHHHHHHHHHHHHHHHH
T ss_pred hhcCCcccceEEEEeC--------HHHHHHHHHHhhhcccCCCHHHHHHHHHHHhcc----HHHHHHHHHHHHHHHHHHH
Confidence 9998899999999986 467777776553 34567788899888888753 6778888999999999999
Q ss_pred hcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEeccChHHHHHHHHHHHH
Q 014603 334 KEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALEDGLGRMKA 413 (422)
Q Consensus 334 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~l~~~~~~l~~ 413 (422)
+++ ++. +..|.+++++|+.++ . +..++...+++++||.+.||..|+.++++||+++.+++++++++++|.+
T Consensus 314 ~~~-g~~-~~~~~~~~~~~~~~~-~------~~~~l~~~l~~~~gi~v~~g~~f~~~~~~Ris~~~~~~~l~~~l~~l~~ 384 (389)
T 1o4s_A 314 KKM-GVK-FVEPEGAFYLFFKVR-G------DDVKFCERLLEEKKVALVPGSAFLKPGFVRLSFATSIERLTEALDRIED 384 (389)
T ss_dssp HHT-TCC-CCCCSBSSEEEEECS-S------CHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCSCHHHHHHHHHHHHH
T ss_pred Hhc-CCe-eecCCcceEEEEeCC-C------CHHHHHHHHHHHCCEEEeCchhcCCCCeEEEEEeCCHHHHHHHHHHHHH
Confidence 988 777 446777889998886 1 5677777776577999999988877789999999899999999999998
Q ss_pred HHH
Q 014603 414 FYD 416 (422)
Q Consensus 414 ~~~ 416 (422)
+++
T Consensus 385 ~l~ 387 (389)
T 1o4s_A 385 FLN 387 (389)
T ss_dssp HHT
T ss_pred HHh
Confidence 874
No 13
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=100.00 E-value=1.2e-47 Score=366.71 Aligned_cols=389 Identities=26% Similarity=0.459 Sum_probs=312.5
Q ss_pred cccHHHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHH
Q 014603 15 KANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARR 94 (422)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~ 94 (422)
.++.|+.++..+.++.+. ...+.. . +++++|+|+.|.+... .++.++.+.+++.+.+... ...|++..+.+++|+
T Consensus 11 ~~~~~~~~~~~~~~~~~~-~~~~~~-~-~g~~~i~l~~~~~~~~-~~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~l~~ 85 (406)
T 1xi9_A 11 RASKRALSVEYAIRDVVL-PARELE-K-KGIKVIRLNIGDPVKF-DFQPPEHMKEAYCKAIKEG-HNYYGDSEGLPELRK 85 (406)
T ss_dssp CCCHHHHTCCC--------CHHHHH-H-TTCCCEECCCCCGGGT-TCCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHH
T ss_pred hHHHHHhcCChhHHHHHH-HHHHHH-H-cCCCEEEecCCCCCcC-CCCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHH
Confidence 467899999999888877 443332 2 4788999999997310 2567799999999988754 347888788999999
Q ss_pred HHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHH
Q 014603 95 AIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLD 174 (422)
Q Consensus 95 ~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 174 (422)
++++++.+.+|+++++++|++|+|+++|+..++++++++||+|+++.|+|+++...++..|.+++.++.++++++.+|++
T Consensus 86 ~la~~l~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~ 165 (406)
T 1xi9_A 86 AIVEREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDID 165 (406)
T ss_dssp HHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEEEEGGGTSEECHH
T ss_pred HHHHHHHHhcCCCCCHHHEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCccHHHHHHHcCCEEEEeecCCCcCCcCCHH
Confidence 99999998777788889999999999999999999999999999999999999999999999999998865456778999
Q ss_pred HHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCC-eEEEecC
Q 014603 175 AVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP-VLTLGSI 253 (422)
Q Consensus 175 ~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~-~i~i~s~ 253 (422)
.|++.++++++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++ ...++..++ .++ +++++|+
T Consensus 166 ~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~-~~~~~~~~~-~~~~~i~~~s~ 243 (406)
T 1xi9_A 166 DIRKKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEG-EHISPGSLT-KDVPVIVMNGL 243 (406)
T ss_dssp HHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSS-CCCCHHHHC-SSSCEEEEEES
T ss_pred HHHHhhCcCceEEEEECCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEcCccccccCC-CCCCHHHcC-CCceEEEEecc
Confidence 9999998889999999999999999999999999999999999999999999987743 233444554 456 7999999
Q ss_pred ccccCCCCceeEEEE--eeCCCCcccchhHHHHHHhhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHH
Q 014603 254 SKRWIVPGWRLGWLV--TSDPNGILQDSGIVDSIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCD 331 (422)
Q Consensus 254 sK~~~~~G~r~G~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 331 (422)
||.++++|+|+||++ .+++. . .++++.+........+++.+.+.++.++|+.. ..++++.+++++++++.+.+
T Consensus 244 sK~~~~~G~r~G~~~~~~~~~~--~--~~l~~~l~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~ 318 (406)
T 1xi9_A 244 SKVYFATGWRLGYMYFVDPENK--L--SEVREAIDRLARIRLCPNTPAQFAAIAGLTGP-MDYLKEYMKKLKERRDYIYK 318 (406)
T ss_dssp TTTTCCGGGCCEEEEEECTTCT--T--HHHHHHHHHHHHHTCCSCSHHHHHHHHHHHSC-CHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCccEEEEEEEecCchh--H--HHHHHHHHHHHHhhcCCCHHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHHHH
Confidence 999988999999998 64100 0 16777776655432577888999999999643 34588888999999999999
Q ss_pred HhhcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEeccChHHHHHHHH
Q 014603 332 RLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAVEPSALEDGLG 409 (422)
Q Consensus 332 ~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRis~~~~~~~l~~~~~ 409 (422)
.|+++|++. +..|.+++++|+.++.. . + .+..++...+++++||.+.||..|+. .+++||++++++++++++++
T Consensus 319 ~L~~~~~~~-~~~~~~~~~~~~~~~~~-~-~-~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~lRis~~~~~~~i~~~~~ 394 (406)
T 1xi9_A 319 RLNEIPGIS-TTKPQGAFYIFPKIEVG-P-W-KNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFLPPIEILEEAMD 394 (406)
T ss_dssp HHHTSTTEE-CCCCCBSSEECCEECSC-S-C-SSHHHHHHHHHHHHCEECEEGGGGCGGGTTBEEEECCSCHHHHHHHHH
T ss_pred HHHhCCCCe-eecCCeeEEEEEecCcc-C-C-CCHHHHHHHHHHhCCEEEeCchhcCCCCCCEEEEEecCCHHHHHHHHH
Confidence 999988887 44677788888877531 0 0 15667777776577999999988875 68999999988999999999
Q ss_pred HHHHHHHHhc
Q 014603 410 RMKAFYDRHA 419 (422)
Q Consensus 410 ~l~~~~~~~~ 419 (422)
+|.++++++.
T Consensus 395 ~l~~~l~~~~ 404 (406)
T 1xi9_A 395 RFEKFMKERL 404 (406)
T ss_dssp HHHHHHHHC-
T ss_pred HHHHHHHHHh
Confidence 9999998764
No 14
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=100.00 E-value=4e-48 Score=369.53 Aligned_cols=376 Identities=19% Similarity=0.311 Sum_probs=308.8
Q ss_pred cHHHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHH
Q 014603 17 NEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAI 96 (422)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~i 96 (422)
++++..++++.++.+.+.... ..+.++|||+.|.+. ++.++.+.+++.+++.......|++..+.+++|+++
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~----~~g~~~idl~~g~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~i 94 (404)
T 2o1b_A 23 SNKLANIPDSYFGKTMGRKIE----HGPLPLINMAVGIPD----GPTPQGIIDHFQKALTIPENQKYGAFHGKEAFKQAI 94 (404)
T ss_dssp CHHHHTSCCCTTC-------C----CCSSCCEECCCCSCS----SCCCHHHHHHHHHHTTCHHHHSCCCTTCCHHHHHHH
T ss_pred hhHhhhCCchHHHHHHHHHHh----cCCCCEEecCCcCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHH
Confidence 778888888877777654332 246779999999965 456789999999988543234688777899999999
Q ss_pred HHHHhhcCCCCCCC-CCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHH
Q 014603 97 ADYLNRDLPYKLSP-DDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDA 175 (422)
Q Consensus 97 a~~l~~~~~~~~~~-~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~ 175 (422)
++++.+.+|..+++ ++|++|+|++++++.++++++++||+|+++.|+|+++...++..|.+++.++.++ +++.+|++.
T Consensus 95 a~~~~~~~g~~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~ 173 (404)
T 2o1b_A 95 VDFYQRQYNVTLDKEDEVCILYGTKNGLVAVPTCVINPGDYVLLPDPGYTDYLAGVLLADGKPVPLNLEP-PHYLPDWSK 173 (404)
T ss_dssp HHHHHHHHCCCCCTTTSEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCSSHHHHHHHTTCEEEEEECCT-TTCCCCGGG
T ss_pred HHHHHHHhCCCCCCcccEEEcCCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHCCCEEEEeccCc-ccCcCCHHH
Confidence 99998776766676 7999999999999999999999999999999999999999999999999998865 456789999
Q ss_pred HHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccC-CCCCeEEEecCc
Q 014603 176 VEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG-SIVPVLTLGSIS 254 (422)
Q Consensus 176 l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~-~~~~~i~i~s~s 254 (422)
|++.++++++++++++|+||||.++|.+++++|+++|+++|++||+||+|+.+.+++. ..++..+. ..++++++.|+|
T Consensus 174 l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~-~~~~~~~~~~~~~~i~~~s~s 252 (404)
T 2o1b_A 174 VDSQIIDKTKLIYLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDAK-NPSILASENGKDVAIEIYSLS 252 (404)
T ss_dssp SCHHHHHHEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTSSCEEEEECTTTTCBSSSC-CCCGGGSTTHHHHEEEEEEST
T ss_pred HHHhhccCceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCC-CCChhhcCCCCCCEEEEEecc
Confidence 9888877789999999999999999999999999999999999999999999887652 23333332 224679999999
Q ss_pred cccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhh-hccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHh
Q 014603 255 KRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRL 333 (422)
Q Consensus 255 K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L 333 (422)
|+|+++|+|+||++++ +++++++..... ...+++.+.+.++.++|+.. +.++++.+++++++++.+.+.|
T Consensus 253 K~~g~~G~r~G~~~~~--------~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L 323 (404)
T 2o1b_A 253 KGYNMSGFRVGFAVGN--------KDMIQALKKYQTHTNAGMFGALQDAAIYALNHY-DDFLEEQSNVFKTRRDRFEAML 323 (404)
T ss_dssp TTTTCGGGCCEEEEEC--------HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhccCchhheEeEecC--------HHHHHHHHHHHhhccCCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHH
Confidence 9998899999999985 567888876653 34578889999999999764 5788899999999999999999
Q ss_pred hcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEeccChHHHHHHHHHH
Q 014603 334 KEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAVEPSALEDGLGRM 411 (422)
Q Consensus 334 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRis~~~~~~~l~~~~~~l 411 (422)
+++ ++. +..+.+++|+|+.++.. .+..++...+++++||.+.||..|+. .+++||+++.+++++++++++|
T Consensus 324 ~~~-g~~-~~~~~~g~~~~~~~~~~-----~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~~~e~l~~~l~~l 396 (404)
T 2o1b_A 324 AKA-DLP-FVHAKGGIYVWLETPPG-----YDSEQFEQFLVQEKSILVAPGKPFGENGNRYVRISLALDDQKLDEAAIRL 396 (404)
T ss_dssp HHT-TCC-EECCCBSSEEEEECCTT-----CCHHHHHHHHHHHHCEECEESGGGCGGGTTEEEEECCSCTTHHHHHHHHH
T ss_pred Hhc-CCe-ecCCCcceEEEEeCCCC-----CCHHHHHHHHHHHCCEEEeCchhhCcCCCCeEEEEEcCCHHHHHHHHHHH
Confidence 988 776 44677788999998632 24667777777677999999988864 6899999998889999999999
Q ss_pred HHHHHHh
Q 014603 412 KAFYDRH 418 (422)
Q Consensus 412 ~~~~~~~ 418 (422)
.++++++
T Consensus 397 ~~~l~~~ 403 (404)
T 2o1b_A 397 TELAYLY 403 (404)
T ss_dssp HGGGGGG
T ss_pred HHHHHhh
Confidence 9887664
No 15
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=100.00 E-value=3.4e-48 Score=371.07 Aligned_cols=375 Identities=20% Similarity=0.344 Sum_probs=314.4
Q ss_pred cHHHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHH
Q 014603 17 NEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAI 96 (422)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~i 96 (422)
++|+...+++.++.+++.. .+.++|+|+.|.|+ +++++.+.+++.+++.......|++..+..++|+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~-------~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~l 70 (410)
T 3e2y_A 2 AKRIEGLDSNVWVEFTKLA-------ADPSVVNLGQGFPD----ISPPSYVKEELSKAAFIDNMNQYTRGFGHPALVKAL 70 (410)
T ss_dssp CGGGTTCCCCHHHHTTTTT-------TSTTSEECSSCCCC----SCCCHHHHHHHHHHHTCGGGGSCCCTTCCHHHHHHH
T ss_pred chhhccCCccHHHHHHHHh-------cCCCeEEecCCCCC----CCCCHHHHHHHHHHHhCccccCCCCCCChHHHHHHH
Confidence 3567777777777766422 45789999999965 678899999999998765456898888899999999
Q ss_pred HHHHhhcCCCCCCC-CCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccC---------C
Q 014603 97 ADYLNRDLPYKLSP-DDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLP---------A 166 (422)
Q Consensus 97 a~~l~~~~~~~~~~-~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~---------~ 166 (422)
++++++.+|..+++ ++|++|+|++++++.++++++++||+|+++.|+|+++...++..|.+++.+++++ .
T Consensus 71 a~~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~ 150 (410)
T 3e2y_A 71 SCLYGKIYQRQIDPNEEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDGMKWTS 150 (410)
T ss_dssp HHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEECCCCSSCCBG
T ss_pred HHHHHHHhCCCCCCCCCEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEeccccccccccccc
Confidence 99999878877888 8999999999999999999999999999999999999999999999999988763 2
Q ss_pred CCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCC-CC
Q 014603 167 KGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IV 245 (422)
Q Consensus 167 ~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~-~~ 245 (422)
.++.+|++.+++.++++++++++++|+||||.+++.+++++|+++|+++|+++|+||+|+.+.+++....++..+.. .+
T Consensus 151 ~~~~~d~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~ 230 (410)
T 3e2y_A 151 SDWTFDPRELESKFSSKTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWE 230 (410)
T ss_dssp GGEECCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTCGG
T ss_pred cCCcCCHHHHHhhcCCCceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHHHcCCccC
Confidence 35668999999999888999999999999999999999999999999999999999999999888766556555542 35
Q ss_pred CeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhh-hccCcchHHHHHHHHHHhh------chHHHHHHH
Q 014603 246 PVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQGAVPQILEK------TEEEFFSKI 318 (422)
Q Consensus 246 ~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~------~~~~~~~~~ 318 (422)
+++++.|+||.|+++|+|+||++++ +++++.+..... ...+++++.+.++..+|+. ..+.++++.
T Consensus 231 ~~i~~~S~sK~~g~~G~r~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 302 (410)
T 3e2y_A 231 RTITIGSAGKTFSVTGWKLGWSIGP--------AHLIKHLQTVQQNSFYTCATPLQAALAEAFWIDIKRMDDPECYFNSL 302 (410)
T ss_dssp GEEEEEEHHHHSSCGGGCCEEEECC--------HHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHH
T ss_pred eEEEEecchhhcCCCCceEEEEEEC--------HHHHHHHHHHHHhhccCCChHHHHHHHHHHHhhhccccchHHHHHHH
Confidence 7899999999998899999999986 467787776653 3457788999999988873 124678889
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccccCC-------CCHHHHHHHHHHhcCeEEecCCCCCC--
Q 014603 319 TDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGI-------NSDMEFALKLAKEESVIVLPGITVGL-- 389 (422)
Q Consensus 319 ~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-------~~~~~~~~~l~~~~gi~v~~g~~~~~-- 389 (422)
+++++++++.+.+.|+++ ++. +..|.+++|+|+.++.... +. .++.+++..+++++||.+.||..|+.
T Consensus 303 ~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~ 379 (410)
T 3e2y_A 303 PKELEVKRDRMVRLLNSV-GLK-PIVPDGGYFIIADVSSLGA-DLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSK 379 (410)
T ss_dssp HHHHHHHHHHHHHHHHTT-TCE-EEBCSBSSEEEEECGGGCC-CCTTCCSSCCHHHHHHHHHHHHHSEECEEGGGGSCTT
T ss_pred HHHHHHHHHHHHHHHHHC-CCe-ecCCCccEEEEEEchhhhc-ccccccccccCHHHHHHHHHHHcCEEEeCchhhCCCC
Confidence 999999999999999998 776 4478889999998864211 00 01346777777888999999998863
Q ss_pred -----CCeEEEEeccChHHHHHHHHHHHH
Q 014603 390 -----KDWLRITFAVEPSALEDGLGRMKA 413 (422)
Q Consensus 390 -----~~~iRis~~~~~~~l~~~~~~l~~ 413 (422)
.+++||+++.++++|++++++|++
T Consensus 380 ~~~~~~~~iRis~~~~~e~l~~~l~~l~~ 408 (410)
T 3e2y_A 380 SKPHFEKLVRFCFIKKDSTLDAAEEIFRA 408 (410)
T ss_dssp THHHHTTEEEEECCCCHHHHHHHHHHHHT
T ss_pred CCCCCCCEEEEEEcCCHHHHHHHHHHHHh
Confidence 589999999999999999999875
No 16
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.2e-48 Score=372.01 Aligned_cols=376 Identities=23% Similarity=0.366 Sum_probs=307.0
Q ss_pred ccCccHHHHHHHHHhhh--hccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHH
Q 014603 23 ASGITVRGVLNSLLENL--NKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYL 100 (422)
Q Consensus 23 ~~~~~~~~~~~~~~~~~--~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l 100 (422)
.+++.++.+.+...... ....++++|||+.|.|. +++++.+.+++.+++.......|++..|.+++|+++++++
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~----~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l 108 (447)
T 3b46_A 33 TAKDVWSLTNEAAAKAANNSKNQGRELINLGQGFFS----YSPPQFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKLY 108 (447)
T ss_dssp CCCCHHHHHHHHHHHHCCC---TTSCCEECCCCSCS----SCCCHHHHHHHHHHTTSGGGGSCCCTTCCHHHHHHHHHHH
T ss_pred cCccHHHHHHHHHHhhccchhccCCCeEEccCCCCC----CCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHH
Confidence 55566666664332110 01146789999999865 5678999999999987533458988889999999999999
Q ss_pred hhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCC----------Ccc
Q 014603 101 NRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAK----------GWE 170 (422)
Q Consensus 101 ~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~----------~~~ 170 (422)
.+.+|.++++++|++|+|+++|+..++++++++||+|++++|+|+++...++..|.+++.++.++.+ ++.
T Consensus 109 ~~~~g~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~ 188 (447)
T 3b46_A 109 SPIYNTELKAENVTVTTGANEGILSCLMGLLNAGDEVIVFEPFFDQYIPNIELCGGKVVYVPINPPKELDQRNTRGEEWT 188 (447)
T ss_dssp TTTTTSCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEEEECCGGGGTSCBCSTTSE
T ss_pred HHhcCCCCChhhEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeCCCccccccccccccCcc
Confidence 8888877888999999999999999999999999999999999999999999999999999886542 578
Q ss_pred cCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCcccc--CCCCCeE
Q 014603 171 VDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF--GSIVPVL 248 (422)
Q Consensus 171 ~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~--~~~~~~i 248 (422)
+|++.|++.++++++++++++|+||||.++|.+++++|+++|++||++||+||+|..+.+++ ...++..+ +..++++
T Consensus 189 ~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g-~~~~~~~~~~~~~~~~i 267 (447)
T 3b46_A 189 IDFEQFEKAITSKTKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTD-SFTRIATLSPEIGQLTL 267 (447)
T ss_dssp ECHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSS-CCCCGGGSCHHHHTTEE
T ss_pred cCHHHHHHhhccCCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCC-CCcCHHHcCCCCCCcEE
Confidence 99999999998889999999999999999999999999999999999999999999988876 22344443 1235689
Q ss_pred EEecCccccCCCCceeEEEEe-eCCCCcccchhHHHHHHhhh-hhccCcchHHHHHHHHHHhhch-HHHHHHHHHHHHHH
Q 014603 249 TLGSISKRWIVPGWRLGWLVT-SDPNGILQDSGIVDSIKSFL-NISSDPATFIQGAVPQILEKTE-EEFFSKITDILRET 325 (422)
Q Consensus 249 ~i~s~sK~~~~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~ 325 (422)
++.|+||.|+++|+|+||+++ + +++++.+.... ....+++.+.|.++.++|+... +.++++.+++++++
T Consensus 268 ~i~S~sK~~~~~G~riG~~~~~~--------~~l~~~l~~~~~~~~~~~~~~~~~a~~~aL~~~~~~~~~~~~~~~~~~~ 339 (447)
T 3b46_A 268 TVGSAGKSFAATGWRIGWVLSLN--------AELLSYAAKAHTRICFASPSPLQEACANSINDALKIGYFEKMRQEYINK 339 (447)
T ss_dssp EEEEHHHHTTCTTSCCEEEECSC--------HHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred EEecCchhcCCcchhhEEEEeCC--------HHHHHHHHHHHhhccCCCChHHHHHHHHHHhCCcchHHHHHHHHHHHHH
Confidence 999999999889999999998 5 56778777654 3345778889999988987643 56788899999999
Q ss_pred HHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccccC----------CCCHHHHHHHHHHhcCeEEecCCCCCC------
Q 014603 326 ADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEG----------INSDMEFALKLAKEESVIVLPGITVGL------ 389 (422)
Q Consensus 326 ~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----------~~~~~~~~~~l~~~~gi~v~~g~~~~~------ 389 (422)
++.+.+.|+++ ++. +..|.+|+|+|+.++....+. ..++.++..++++++||.+.||..|+.
T Consensus 340 ~~~l~~~L~~~-g~~-~~~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~ 417 (447)
T 3b46_A 340 FKIFTSIFDEL-GLP-YTAPEGTYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLINELGVVAIPPTEFYIKEHEKA 417 (447)
T ss_dssp HHHHHHHHHHH-TCC-EECCSBSSEEEEECTTCCCCTTCCCCGGGSSSCHHHHHHHHHHHHTCEECBCGGGGSCGGGGGG
T ss_pred HHHHHHHHHHC-CCe-ecCCCeeEEEEEecccccCccccccccccccCCCHHHHHHHHHHhCCEEEECchHhCCCCccCC
Confidence 99999999987 777 446888999999986421000 113556777777778999999988753
Q ss_pred -CCeEEEEeccChHHHHHHHHHHHH
Q 014603 390 -KDWLRITFAVEPSALEDGLGRMKA 413 (422)
Q Consensus 390 -~~~iRis~~~~~~~l~~~~~~l~~ 413 (422)
.+++|++++.++++|++++++|++
T Consensus 418 ~~~~iRls~~~~~e~l~~~~~~l~~ 442 (447)
T 3b46_A 418 AENLLRFAVCKDDAYLENAVERLKL 442 (447)
T ss_dssp GTTEEEEECCSCHHHHHHHHHHGGG
T ss_pred CCCEEEEEEeCCHHHHHHHHHHHHH
Confidence 589999999889999999999887
No 17
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=4.2e-47 Score=363.52 Aligned_cols=377 Identities=24% Similarity=0.404 Sum_probs=310.6
Q ss_pred ccHHHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHH
Q 014603 16 ANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRA 95 (422)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ 95 (422)
+++|+..++.+.++.+.... ...++|||+.|.+. +++++.+.+++.+++... ...|++..+..++|++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~-------~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~l~~~ 70 (411)
T 2o0r_A 3 TVSRLRPYATTVFAEMSALA-------TRIGAVNLGQGFPD----EDGPPKMLQAAQDAIAGG-VNQYPPGPGSAPLRRA 70 (411)
T ss_dssp CCGGGGGGSSCHHHHHHHHH-------HTTTCEESSCSSCS----SCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHH
T ss_pred hhhHhHhcCccHHHHHHHHh-------hcCCeeeccCcCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHH
Confidence 46678888877776666432 23568999999865 467899999999998763 4578888889999999
Q ss_pred HHHHHhhcCCCCCCCC-CEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCC-CCcccCH
Q 014603 96 IADYLNRDLPYKLSPD-DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPA-KGWEVDL 173 (422)
Q Consensus 96 ia~~l~~~~~~~~~~~-~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~ 173 (422)
+++++.+.+|.+++++ +|++|+|+++|++.++++++++||+|+++.|+|+++...++..|.+++.++.+++ +++.+|+
T Consensus 71 la~~~~~~~g~~~~~~~~v~~t~g~~~al~~~~~~~~~~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~ 150 (411)
T 2o0r_A 71 IAAQRRRHFGVDYDPETEVLVTVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYSPVVAMAGAHRVTVPLVPDGRGFALDA 150 (411)
T ss_dssp HHHHHHHHHCCCCCTTTSEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCH
T ss_pred HHHHHHHHcCCCCCCCceEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHcCCEEEEeeccccccCCCCCH
Confidence 9999988777777888 9999999999999999999999999999999999999999999999999987643 2467899
Q ss_pred HHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCC-CCCeEEEec
Q 014603 174 DAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IVPVLTLGS 252 (422)
Q Consensus 174 ~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~-~~~~i~i~s 252 (422)
+.|++.++++++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.++|....++..+.. .++++++.|
T Consensus 151 ~~l~~~l~~~~~~v~l~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s 230 (411)
T 2o0r_A 151 DALRRAVTPRTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGMAERTITISS 230 (411)
T ss_dssp HHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEE
T ss_pred HHHHHhhccCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcChhhccCCCCCEEEEee
Confidence 9999999888999999999999999999999999999999999999999999998887655445554432 356799999
Q ss_pred CccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhh-hccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHH
Q 014603 253 ISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCD 331 (422)
Q Consensus 253 ~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 331 (422)
+||.++++|+|+||++++ +++++.+..... ...+++.+.+.++.++|+.. +.++++.+++++++++.+.+
T Consensus 231 ~sK~~~~~G~r~G~~~~~--------~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~ 301 (411)
T 2o0r_A 231 AAKMFNCTGWKIGWACGP--------AELIAGVRAAKQYLSYVGGAPFQPAVALALDTE-DAWVAALRNSLRARRDRLAA 301 (411)
T ss_dssp HHHHTTCTTTCEEEEECC--------HHHHHHHHHHHHHHTSCCCTTHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHH
T ss_pred chhhcCCccceEEEEeeC--------HHHHHHHHHHHhhccCCCChHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHH
Confidence 999998899999999985 467777766553 33466778888888888754 57788899999999999999
Q ss_pred HhhcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCC-C------------CCCeEEEEec
Q 014603 332 RLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITV-G------------LKDWLRITFA 398 (422)
Q Consensus 332 ~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~-~------------~~~~iRis~~ 398 (422)
.|+++ ++. +..|.+++++|+.++... ..+..++...+++++||.+.||..| . ..+++||+++
T Consensus 302 ~L~~~-g~~-~~~~~~g~~~~~~~~~~~---~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~~~~~~~~~~iRis~~ 376 (411)
T 2o0r_A 302 GLTEI-GFA-VHDSYGTYFLCADPRPLG---YDDSTEFCAALPEKVGVAAIPMSAFCDPAAGQASQQADVWNHLVRFTFC 376 (411)
T ss_dssp HHHHH-TCE-ECCCCBSSEEEEECGGGT---CCCHHHHHHHHHHHHSEECEEGGGGSCCC--------CCGGGCEEEECC
T ss_pred HHHHc-CCE-ecCCCeeEEEEEecCCCC---CCCHHHHHHHHHHhCCEEEcChhhhCCCccccccccccCCCCeEEEEec
Confidence 99987 776 446777889999886420 0146677777776789999999877 2 2468999999
Q ss_pred cChHHHHHHHHHHHHHHHHh
Q 014603 399 VEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 399 ~~~~~l~~~~~~l~~~~~~~ 418 (422)
.+++++++++++|++++++.
T Consensus 377 ~~~e~i~~~~~~l~~~~~~~ 396 (411)
T 2o0r_A 377 KRDDTLDEAIRRLSVLAERP 396 (411)
T ss_dssp SCHHHHHHHHHHHGGGGC--
T ss_pred CCHHHHHHHHHHHHHHHhcc
Confidence 88999999999999877554
No 18
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=100.00 E-value=1.3e-46 Score=357.74 Aligned_cols=357 Identities=18% Similarity=0.242 Sum_probs=305.8
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 122 (422)
.++++|||+.|++. +++++.+.+++.+++.+. ...|++. ..++++.+++++.+.+|.++++++|++|+|++++
T Consensus 25 ~g~~~i~~~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~i~~~~g~~~a 97 (391)
T 3dzz_A 25 LKEKELPMWIAEMD----FKIAPEIMASMEEKLKVA-AFGYESV--PAEYYKAVADWEEIEHRARPKEDWCVFASGVVPA 97 (391)
T ss_dssp CCTTCEECCSSCCS----SCCCHHHHHHHHHHHTTC-CCCCBCC--CHHHHHHHHHHHHHHHSCCCCGGGEEEESCHHHH
T ss_pred cCCCceeccccCCC----CCCCHHHHHHHHHHHhcC-cCCCCCC--CHHHHHHHHHHHHHHhCCCCCHHHEEECCCHHHH
Confidence 46789999999854 688999999999998764 3467664 6899999999999888777889999999999999
Q ss_pred HHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccC-CCCcccCHHHHHHhhc-CCceEEEEeCCCCCccccc
Q 014603 123 IEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLP-AKGWEVDLDAVEALAD-ENTVALVIINPGNPCGNVY 200 (422)
Q Consensus 123 ~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~~~l~~~~~-~~~~~i~i~~p~nptG~~~ 200 (422)
++.++.+++++||+|+++.|+|+++...++..|.+++.++.++ .+++.+|++.|++.++ ++++++++++|+||||.++
T Consensus 98 ~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i~~p~nptG~~~ 177 (391)
T 3dzz_A 98 ISAMVRQFTSPGDQILVQEPVYNMFYSVIEGNGRRVISSDLIYENSKYSVNWADLEEKLATPSVRMMVFCNPHNPIGYAW 177 (391)
T ss_dssp HHHHHHHHSCTTCEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTSTTEEEEEEESSBTTTTBCC
T ss_pred HHHHHHHhCCCCCeEEECCCCcHHHHHHHHHcCCEEEEeeeeecCCceeecHHHHHHHHhccCceEEEEECCCCCCCccc
Confidence 9999999999999999999999999999999999999998852 4456689999999997 6899999999999999999
Q ss_pred CHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCC--CCCeEEEecCccccCCCCceeEEEEeeCCCCcccc
Q 014603 201 TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS--IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQD 278 (422)
Q Consensus 201 ~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~--~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~ 278 (422)
|.+++++|+++|+++|+++|+||+|+.+.++|....++..+.. .++++++.|+||.++++|+|+||+++++
T Consensus 178 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~~~~~------- 250 (391)
T 3dzz_A 178 SEEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACAIIPN------- 250 (391)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEEEECCS-------
T ss_pred CHHHHHHHHHHHHHCCCEEEEecccccccCCCCCceehhhcCccccCcEEEEEeChhhccccchhheEEEECC-------
Confidence 9999999999999999999999999998887766666666543 4578999999999988999999999864
Q ss_pred hhHHHHHHhhhh--hccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCCCCCCCceEEEEec
Q 014603 279 SGIVDSIKSFLN--ISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKE-IPCITCPKKPEGSMFVMVKL 355 (422)
Q Consensus 279 ~~~~~~~~~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~g~~~~~~~ 355 (422)
+++.+.+..... ...+++++.+.++.++++. .+.++++.+++++++++.+.+.|++ +|++. +..|.+++++|+.+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~ 328 (391)
T 3dzz_A 251 PDLRARAEESFFLAGIGEPNLLAIPAAIAAYEE-GHDWLRELKQVLRDNFAYAREFLAKEVPEVK-VLDSNASYLAWVDI 328 (391)
T ss_dssp HHHHHHHHHHHHHHTCSSCCTTHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCTTSE-ECCCCBSSEEEEEC
T ss_pred HHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHhhCCCcE-EeccCceEEEEEeh
Confidence 467787776643 2347788899999888876 3577889999999999999999998 88888 44788888899988
Q ss_pred CcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEeccChHHHHHHHHHHHHHHHHhc
Q 014603 356 NYSLLEGINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAVEPSALEDGLGRMKAFYDRHA 419 (422)
Q Consensus 356 ~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRis~~~~~~~l~~~~~~l~~~~~~~~ 419 (422)
+... .+..++...+++++||.+.||..|+. ++++||+++++++++++++++|.++++++.
T Consensus 329 ~~~~----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~~~~i~~~l~~l~~~l~~~~ 390 (391)
T 3dzz_A 329 SALG----MNAEDFCKYLREKTGLIISAGNGYRGNGHEFVRINLACPKELVIDGMQRLKQGVLNLN 390 (391)
T ss_dssp GGGC----SCHHHHHHHHHHHHCEECEESGGGCTTGGGEEEEECCSCHHHHHHHHHHHHHHHHTCC
T ss_pred hhcC----CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHHHHhh
Confidence 7421 15677777776678999999998876 489999999999999999999999998764
No 19
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=100.00 E-value=4.2e-47 Score=363.13 Aligned_cols=357 Identities=20% Similarity=0.281 Sum_probs=303.9
Q ss_pred CceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCC-CCEEEecCHHHHHH
Q 014603 46 PLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSP-DDVYLTLGCTQAIE 124 (422)
Q Consensus 46 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~-~~i~~~~g~~~a~~ 124 (422)
.+|||++|++. .++++|.+.+++.+++.+.....|++..+..++++.+++++.+.+|..+++ ++|++|+|++++++
T Consensus 40 ~~id~~~g~~~---~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~l~~~l~~~~g~~~~~~~~i~~~~g~~~a~~ 116 (407)
T 3nra_A 40 RPVDFSHGDVD---AHEPTPGAFDLFSAGVQSGGVQAYTEYRGDLGIRDLLAPRLAAFTGAPVDARDGLIITPGTQGALF 116 (407)
T ss_dssp CCEETTSCCTT---TSCCCTTHHHHHHHHHHHTHHHHSCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHH
T ss_pred ceeeecCcCCC---CCCCcHHHHHHHHHHHhcCCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHH
Confidence 48999999865 267889999999998875433468888899999999999998887777766 79999999999999
Q ss_pred HHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccC----CCCcccCHHHHHHhhcCCceEEEEeCCCCCccccc
Q 014603 125 VILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLP----AKGWEVDLDAVEALADENTVALVIINPGNPCGNVY 200 (422)
Q Consensus 125 ~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~----~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~ 200 (422)
.++.+++++||+|+++.|+|+++...++..|.+++.++.++ ++++.+|++.|++.++++++++++++|+||||.++
T Consensus 117 ~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~ 196 (407)
T 3nra_A 117 LAVAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFKAGARVFLFSNPNNPAGVVY 196 (407)
T ss_dssp HHHHTTCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHTTCCEEEEESSCTTTCCCC
T ss_pred HHHHHhCCCCCEEEEcCCcccchHHHHHHcCCEEEEeecccccccCcCCCcCHHHHHHHHhhCCcEEEEcCCCCCCCccc
Confidence 99999999999999999999999999999999999999843 25677999999999988899999999999999999
Q ss_pred CHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccC--CCCCeEEEecCccccCCCCceeEEEEeeCCCCcccc
Q 014603 201 TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG--SIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQD 278 (422)
Q Consensus 201 ~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~--~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~ 278 (422)
|.+++++|+++|++||+++|+||+|+.+.+++....++..++ ..++++++.|+||.|+++|+|+||++++
T Consensus 197 ~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~-------- 268 (407)
T 3nra_A 197 SAEEIGQIAALAARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVAFGS-------- 268 (407)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEEEEEC--------
T ss_pred CHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCChhhcCcccCCcEEEEeCcccccCCCeeeEEEEEcC--------
Confidence 999999999999999999999999999888877666665553 3456899999999998899999999985
Q ss_pred hhHHHHHHhhhh-hccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCc
Q 014603 279 SGIVDSIKSFLN-ISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNY 357 (422)
Q Consensus 279 ~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~ 357 (422)
+++++.+..... ...+++++.+.++.++|+. .+.++++.+++++++++.+.+.|++++++. +..|.+++++|+.++.
T Consensus 269 ~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~~~~~~~~~~~~ 346 (407)
T 3nra_A 269 RAIIARMEKLQAIVSLRAAGYSQAVLRGWFDE-APGWMEDRIARHQAIRDELLHVLRGCEGVF-ARTPQAGSYLFPRLPK 346 (407)
T ss_dssp HHHHHHHHHHHHHHTSSSCHHHHGGGGGTTCC-CTTHHHHHHHHHHHHHHHHHHHHHTSTTCB-CCCCSBSSEECCBCCC
T ss_pred HHHHHHHHHHHhhhccCCChHHHHHHHHHHhc-cchHHHHHHHHHHHHHHHHHHHHhcCCCce-eccCCeeEEEEEeCCC
Confidence 578888776653 3446677888888888864 236678888899999999999999998888 4477888999988864
Q ss_pred ccccCCCCHHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEeccChHHHHHHHHHHHHHHHHhc
Q 014603 358 SLLEGINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAVEPSALEDGLGRMKAFYDRHA 419 (422)
Q Consensus 358 ~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRis~~~~~~~l~~~~~~l~~~~~~~~ 419 (422)
.. .+..++...+++++||.+.||..|+. .+++||+++.++++|++++++|++++++++
T Consensus 347 ~~----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~~~~i~~~~~~l~~~~~~~~ 406 (407)
T 3nra_A 347 LA----VAPAEFVKILRLQAGVVVTPGTEFSPHTADSVRLNFSQDHEAAVAAARRIVTLVERYR 406 (407)
T ss_dssp BS----SCHHHHHHHHHHHHCEECEEGGGTCTTCTTBEEEECCSCHHHHHHHHHHHHHHHHHHB
T ss_pred CC----CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhh
Confidence 21 25677777776777999999988874 689999999999999999999999998865
No 20
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=100.00 E-value=2e-47 Score=361.61 Aligned_cols=351 Identities=17% Similarity=0.274 Sum_probs=301.9
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 122 (422)
+++++|||+.|++. ++++|.+.+++.+++.+. ...|++ .+ .++|+++++++++.++..+++++|++|+|++++
T Consensus 21 ~g~~~idl~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~-~~-~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~a 93 (377)
T 3fdb_A 21 YGQGVLPLWVAESD----FSTCPAVLQAITDAVQRE-AFGYQP-DG-SLLSQATAEFYADRYGYQARPEWIFPIPDVVRG 93 (377)
T ss_dssp SCTTSEECCSSCCC----SCCCHHHHHHHHHHHHTT-CCSSCC-SS-CCHHHHHHHHHHHHHCCCCCGGGEEEESCHHHH
T ss_pred cCCCeeeecccCCC----CCCCHHHHHHHHHHHHcC-CCCCCC-CC-HHHHHHHHHHHHHHhCCCCCHHHEEEeCChHHH
Confidence 58899999999844 678899999999998764 457888 67 899999999999877777889999999999999
Q ss_pred HHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCH
Q 014603 123 IEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTY 202 (422)
Q Consensus 123 ~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~ 202 (422)
++.++++++++||+|+++.|+|+++...++..|.+++.++.++. +|++.|++.++++++++++++|+||||.++|.
T Consensus 94 ~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~----~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~ 169 (377)
T 3fdb_A 94 LYIAIDHFTPAQSKVIVPTPAYPPFFHLLSATQREGIFIDATGG----INLHDVEKGFQAGARSILLCNPYNPLGMVFAP 169 (377)
T ss_dssp HHHHHHHHSCTTCCEEEEESCCTHHHHHHHHHTCCEEEEECTTS----CCHHHHHHHHHTTCCEEEEESSBTTTTBCCCH
T ss_pred HHHHHHHhcCCCCEEEEcCCCcHhHHHHHHHcCCEEEEccCCCC----CCHHHHHHHhccCCCEEEEeCCCCCCCCCCCH
Confidence 99999999999999999999999999999999999999987643 89999999998889999999999999999999
Q ss_pred HHHHHHHHHHHHcCcEEEEcccccccccCC-CCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhH
Q 014603 203 QHLQKIAETAKKLGIMVIADEVYDHLAFGN-TPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGI 281 (422)
Q Consensus 203 ~~l~~i~~~~~~~~~~li~D~~~~~~~~~~-~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~ 281 (422)
+++++|+++|+++|+++|+||+|+.+.+++ ....++..+...++++++.|+||.++++|+|+||+++++ +++
T Consensus 170 ~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~-------~~~ 242 (377)
T 3fdb_A 170 EWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTAASVCITITAPSKAWNIAGLKCAQIIFSN-------PSD 242 (377)
T ss_dssp HHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSCHHHHHHEEEEECSTTTTTCGGGCCEEEECCS-------HHH
T ss_pred HHHHHHHHHHHHcCCEEEEEcccchhhcCCCCCcccHHHccCCCcEEEEEeChHhccCcchhheEEEeCC-------HHH
Confidence 999999999999999999999999988877 555555554445678999999999989999999988753 567
Q ss_pred HHHHHhhhh-hccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCCCCCCCceEEEEecCccc
Q 014603 282 VDSIKSFLN-ISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKE-IPCITCPKKPEGSMFVMVKLNYSL 359 (422)
Q Consensus 282 ~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~g~~~~~~~~~~~ 359 (422)
++.+..... .+.+++++.+.++.++++.. +.++++.+++++++++.+.+.|++ +|++. +..|.+++++|+.++...
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~~~~~~~~~~ 320 (377)
T 3fdb_A 243 AEHWQQLSPVIKDGASTLGLIAAEAAYRYG-TDFLNQEVAYLKNNHDFLLHEIPKRIPGAK-ITPMQATYLMWIDFRDTT 320 (377)
T ss_dssp HHHHHHSCHHHHCCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHSTTCE-ECCCSBCSEEEEECTTSC
T ss_pred HHHHHHHHHhhcCCCCHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHHhhCCCce-EecCCeeEEEEEECcccC
Confidence 787776553 34578889999999888754 577889999999999999999998 78888 447888888899887531
Q ss_pred ccCCCCHHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEeccChHHHHHHHHHHHHHHHHh
Q 014603 360 LEGINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAVEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 360 ~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRis~~~~~~~l~~~~~~l~~~~~~~ 418 (422)
.+.++...+++++||.+.||..|+. .+++||+++++++++++++++|+++++++
T Consensus 321 -----~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~Ris~~~~~e~i~~~l~~l~~~l~~~ 376 (377)
T 3fdb_A 321 -----IEGSPSEFFIEKAKVAMNDGAWFGEDGTGFCRLNFATSREVLEEAIDRMAKAVSHH 376 (377)
T ss_dssp -----CCSCHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHTTC
T ss_pred -----CCHHHHHHHHHhCCEEecCChhccCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhhc
Confidence 1245667777777999999998875 68999999999999999999999998653
No 21
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=100.00 E-value=2.2e-46 Score=359.82 Aligned_cols=378 Identities=19% Similarity=0.247 Sum_probs=304.2
Q ss_pred CcCccccHHHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHH-------------HHHHHHHhhC
Q 014603 11 QWGFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVA-------------VDAIVHSVRS 77 (422)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v-------------~~a~~~~~~~ 77 (422)
+|...+++|+..++++.++.+.+...+. ++++|+|+.|.|+.. .+|. ..+ .++...
T Consensus 2 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~-----~~~~i~l~~G~p~~~-~~p~-~~~~~~~~~~~~~~~~~~~~~~---- 70 (425)
T 2r2n_A 2 NYARFITAASAARNPSPIRTMTDILSRG-----PKSMISLAGGLPNPN-MFPF-KTAVITVENGKTIQFGEEMMKR---- 70 (425)
T ss_dssp CGGGGSCHHHHTCCCCSGGGHHHHHHHS-----CTTCEECCCCCCCGG-GCSE-EEEEEEETTSCCEEECHHHHHH----
T ss_pred chhHHHHHHHhcCCCchHHHHHHHhhcC-----CCCeEEcCCcCCCch-hCCH-HHHHHHHhhcccccccccchhh----
Confidence 3566789999999999999998755432 367899999998731 1121 110 111111
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCC-------CCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHH
Q 014603 78 ARFNCYSSTVGILPARRAIADYLNRDLPYKLS-------PDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEAR 150 (422)
Q Consensus 78 ~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~-------~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~ 150 (422)
...|.+..|.+++|+++++++.+.+|.... +++|++|+|++++++.++++++++||+|++++|+|+++...
T Consensus 71 --~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~ 148 (425)
T 2r2n_A 71 --ALQYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTLQS 148 (425)
T ss_dssp --HTSCCCTTCCHHHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHH
T ss_pred --hcCCCCCCCCHHHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHH
Confidence 237888899999999999999887776653 37999999999999999999999999999999999999999
Q ss_pred HhhCCCeEEEeeccCCCCcccCHHHHHHhhc------------CCceEEEE-eCCCCCcccccCHHHHHHHHHHHHHcCc
Q 014603 151 ATHSHLEVRHFDLLPAKGWEVDLDAVEALAD------------ENTVALVI-INPGNPCGNVYTYQHLQKIAETAKKLGI 217 (422)
Q Consensus 151 ~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~------------~~~~~i~i-~~p~nptG~~~~~~~l~~i~~~~~~~~~ 217 (422)
++..|.+++.++.+. .++|++.|++.++ ++++++++ ++|+||||.++|.+++++|+++|+++|+
T Consensus 149 ~~~~g~~~~~v~~~~---~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~ 225 (425)
T 2r2n_A 149 LHPLGCNIINVASDE---SGIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDF 225 (425)
T ss_dssp HGGGTCEEEEECEET---TEECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTC
T ss_pred HHHcCCEEEEeCcCC---CCCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCC
Confidence 999999999998753 2589999999876 35677765 5889999999999999999999999999
Q ss_pred EEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhh-hccCcc
Q 014603 218 MVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPA 296 (422)
Q Consensus 218 ~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 296 (422)
+||+||+|+.+.|++....++..++.++++++++|+||+|+ +|+|+||++++ +++++.+..... ...+++
T Consensus 226 ~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~SK~~~-~GlRiG~~~~~--------~~l~~~l~~~~~~~~~~~~ 296 (425)
T 2r2n_A 226 LIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKIIS-SGLRIGFLTGP--------KPLIERVILHIQVSTLHPS 296 (425)
T ss_dssp EEEEECTTGGGBSSSSCCCCTGGGCTTSCEEEEEESTTTTC-STTCCEEEEEE--------HHHHHHHHHHHHTTTCSSC
T ss_pred EEEEECCcccccCCCCCCCCccccCCCCCEEEEccchhhcc-CccceEEEecC--------HHHHHHHHHHHHHhcCCCC
Confidence 99999999998887766566666666678999999999987 99999999997 467888876653 345788
Q ss_pred hHHHHHHHHHHhhch----HHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHH
Q 014603 297 TFIQGAVPQILEKTE----EEFFSKITDILRETADICCDRLKE-IPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFAL 371 (422)
Q Consensus 297 ~~~~~a~~~~l~~~~----~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 371 (422)
.+.|.++.++|+... ..++++.+++++++++.+.+.|++ +|++..+..|.+|+|+|+.++.. .+..+++.
T Consensus 297 ~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~p~~g~~~~~~~~~~-----~~~~~~~~ 371 (425)
T 2r2n_A 297 TFNQLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIKVKGI-----NDVKELIE 371 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEECCCSBSSEEEEEETTC-----SCCHHHHH
T ss_pred HHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEeCCCceEEEEEEeCCC-----CCHHHHHH
Confidence 899999999987521 466788889999999999999987 56763134688899999999742 13445434
Q ss_pred HHHHhcCeEEecCCCCCC-----CCeEEEEec-cChHHHHHHHHHHHHHHHHh
Q 014603 372 KLAKEESVIVLPGITVGL-----KDWLRITFA-VEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 372 ~l~~~~gi~v~~g~~~~~-----~~~iRis~~-~~~~~l~~~~~~l~~~~~~~ 418 (422)
..+.++||.+.||..|+. .+++||+++ .+++++++++++|++++++.
T Consensus 372 ~~l~~~gv~v~pg~~f~~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~~ 424 (425)
T 2r2n_A 372 EKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSSASPEQMDVAFQVLAQLIKES 424 (425)
T ss_dssp THHHHTTEECEEGGGGSSSTTSCCCEEEEECSSCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCcEEechhhhcCCCCCCCCEEEEEeCCCCHHHHHHHHHHHHHHHHHh
Confidence 455678999999998864 479999998 89999999999999998753
No 22
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=100.00 E-value=5.6e-47 Score=358.39 Aligned_cols=349 Identities=22% Similarity=0.325 Sum_probs=291.5
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCC-CEEEecCHHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPD-DVYLTLGCTQ 121 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~i~~~~g~~~ 121 (422)
++.++|||+.|.+. ++.+|.+.+++.+++.......|++..+..++|+++++++.+.+|..++++ +|++|+|+++
T Consensus 23 ~g~~~idl~~~~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~l~~~ia~~~~~~~g~~~~~~~~v~~~~g~~~ 98 (376)
T 2dou_A 23 RGVGLIDLSIGSTD----LPPPEAPLKALAEALNDPTTYGYCLKSCTLPFLEEAARWYEGRYGVGLDPRREALALIGSQE 98 (376)
T ss_dssp TTCCCEECSSCCCC----CCCCHHHHHHHHHHTTCGGGSSCCCHHHHHHHHHHHHHHHHHHHSCCCCTTTSEEEESSHHH
T ss_pred cCCCEEeccCCCCC----CCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHH
Confidence 57889999999864 456899999999988654345787756789999999999987767666776 9999999999
Q ss_pred HHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccC
Q 014603 122 AIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYT 201 (422)
Q Consensus 122 a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~ 201 (422)
+++.++++++++||+|+++.|+|+++...++..|.+++.++. .+++.+|++.+++.++++++++++++|+||||.++|
T Consensus 99 a~~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~--~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~ 176 (376)
T 2dou_A 99 GLAHLLLALTEPEDLLLLPEVAYPSYFGAARVASLRTFLIPL--REDGLADLKAVPEGVWREAKVLLLNYPNNPTGAVAD 176 (376)
T ss_dssp HHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHTTCEEEEECB--CTTSSBCGGGSCHHHHHHEEEEEECSSCTTTCCCCC
T ss_pred HHHHHHHHhcCCCCEEEECCCCcHhHHHHHHHcCCEEEEeeC--CCCCCCCHHHHHHhhccCceEEEECCCCCCcCccCC
Confidence 999999999999999999999999999999999999998887 356678999998888777899999999999999999
Q ss_pred HHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhH
Q 014603 202 YQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGI 281 (422)
Q Consensus 202 ~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~ 281 (422)
.+++++|+++|+++|+++|+||+|+.+.+++.....+...+..++++++.|+||.|+++|+|+||++++ +++
T Consensus 177 ~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~--------~~~ 248 (376)
T 2dou_A 177 WGYFEEALGLARKHGLWLIHDNPYVDQVYEGEAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFALGS--------EEA 248 (376)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSTTGGGTEEEEEEHHHHHTCGGGCCEEEEEC--------HHH
T ss_pred HHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCcEEEEecchhhcCChhheeEEEecC--------HHH
Confidence 999999999999999999999999998876632222222233356899999999998899999999985 578
Q ss_pred HHHHHhhhh-hccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccc
Q 014603 282 VDSIKSFLN-ISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLL 360 (422)
Q Consensus 282 ~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~ 360 (422)
++.+..... .+.+++.+.+.++.++|+.. +.++++.+++++++++.+.+.|+++ +. +..|.+++++|+.++..
T Consensus 249 ~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~--~~-~~~~~~~~~~~~~~~~~-- 322 (376)
T 2dou_A 249 LARLERVKGVIDFNQYAGVLRMGVEALKTP-KEVVRGYARVYRERALGMAEALKGV--LS-LLPPRATMYLWGRLPEG-- 322 (376)
T ss_dssp HHHHHHHHHHHCCCSCHHHHHHHHHHHTSC-HHHHHHHHHHHHHHHHHHHHHHTTT--SE-ECCCCBSSEEEEECCTT--
T ss_pred HHHHHHHHHhcccCCCHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHh--cC-ccCCCeeEEEEEECCCC--
Confidence 888876654 34467889999999999763 5778889999999999999999987 55 43677788999998642
Q ss_pred cCCCCHHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEeccChHHHHHHHHHHHHHH
Q 014603 361 EGINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAVEPSALEDGLGRMKAFY 415 (422)
Q Consensus 361 ~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRis~~~~~~~l~~~~~~l~~~~ 415 (422)
.+..++...++++ ||.+.||..|+. .+++||+++.+++++++++++|++++
T Consensus 323 ---~~~~~~~~~l~~~-gi~v~~g~~f~~~~~~~~Ris~~~~~~~i~~~l~~l~~~l 375 (376)
T 2dou_A 323 ---VDDLEFGLRLVER-GVALAPGRGFGPGGKGFVRIALVRPLEELLEAAKRIREAL 375 (376)
T ss_dssp ---CCHHHHHHHHHHT-TEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHTC
T ss_pred ---CCHHHHHHHHHHC-CEEEcCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHh
Confidence 2466777777655 999999988864 68999999988899999999998764
No 23
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=100.00 E-value=9.8e-47 Score=358.01 Aligned_cols=370 Identities=24% Similarity=0.365 Sum_probs=304.6
Q ss_pred cHHHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHH
Q 014603 17 NEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAI 96 (422)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~i 96 (422)
++|+...+.+.++.+.... . ..++|+|+.|.++ +++++.+.+++.+++... ...|++..+..++|+++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~-~------~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~l~~~l 76 (386)
T 1u08_A 9 QSKLPQLGTTIFTQMSALA-Q------QHQAINLSQGFPD----FDGPRYLQERLAHHVAQG-ANQYAPMTGVQALREAI 76 (386)
T ss_dssp CCSCCCCCCCHHHHHHHHH-H------HTTCEECCCSSCS----SCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHH
T ss_pred chhhhcCCccHHHHHHHHH-h------cCCeEEecCCCCC----CCCCHHHHHHHHHHHHhh-ccCCCCCCCCHHHHHHH
Confidence 4455566655555544322 1 2568999999865 467899999999998753 45788878899999999
Q ss_pred HHHHhhcCCCCCCCC-CEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHH
Q 014603 97 ADYLNRDLPYKLSPD-DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDA 175 (422)
Q Consensus 97 a~~l~~~~~~~~~~~-~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~ 175 (422)
++++.+.+|.+++++ +|++|+|++++++.++++++++||+|+++.|+|+++...++..|.+++.++.+++ ++.+|++.
T Consensus 77 a~~l~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~-~~~~d~~~ 155 (386)
T 1u08_A 77 AQKTERLYGYQPDADSDITVTAGATEALYAAITALVRNGDEVICFDPSYDSYAPAIALSGGIVKRMALQPP-HFRVDWQE 155 (386)
T ss_dssp HHHHHHHHSCCCCTTTTEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCTT-TCCCCHHH
T ss_pred HHHHHHHhCCCCCCCCCEEEcCChHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEeecCcc-cCcCCHHH
Confidence 999988777777888 9999999999999999999999999999999999999999999999999988643 56799999
Q ss_pred HHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccC-CCCCeEEEecCc
Q 014603 176 VEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG-SIVPVLTLGSIS 254 (422)
Q Consensus 176 l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~-~~~~~i~i~s~s 254 (422)
|++.++++++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.++|....++..+. ..++++++.|+|
T Consensus 156 l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~s 235 (386)
T 1u08_A 156 FAALLSERTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFG 235 (386)
T ss_dssp HHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHH
T ss_pred HHHhhcccCEEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEEccccccccCCCCCcChhcccCccCcEEEEecch
Confidence 9999988899999999999999999999999999999999999999999999888765444444442 234679999999
Q ss_pred cccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhh-hccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHh
Q 014603 255 KRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRL 333 (422)
Q Consensus 255 K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L 333 (422)
|.|+++|+|+||++++ +++++.+..... ...+++.+.+.++.++|+.. +.++++.+++++++++.+.+.|
T Consensus 236 K~~~~~G~r~G~~~~~--------~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L 306 (386)
T 1u08_A 236 KTYHMTGWKVGYCVAP--------APISAEIRKVHQYLTFSVNTPAQLALADMLRAE-PEHYLALPDFYRQKRDILVNAL 306 (386)
T ss_dssp HHTTCGGGCCEEEECC--------HHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHC-THHHHTHHHHHHHHHHHHHHHT
T ss_pred hhcCCcccceEEEEcC--------HHHHHHHHHHHHhhccCCChHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHHHHHH
Confidence 9998899999999986 467777776553 34567788899988888754 5678889999999999999999
Q ss_pred hcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCC----CCCeEEEEeccChHHHHHHHH
Q 014603 334 KEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVG----LKDWLRITFAVEPSALEDGLG 409 (422)
Q Consensus 334 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~----~~~~iRis~~~~~~~l~~~~~ 409 (422)
+++ ++. +..|.+|+++|+.++... ..+..++...+++++||.+.||..|. ..+++|++++.++++|+++++
T Consensus 307 ~~~-g~~-~~~~~~g~~~~~~~~~~~---~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~iRis~~~~~~~i~~~~~ 381 (386)
T 1u08_A 307 NES-RLE-ILPCEGTYFLLVDYSAVS---TLDDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFAKKESTLLAAAE 381 (386)
T ss_dssp TSS-SCE-ECCCCBSSEEEEECTTTC---CSCHHHHHHHHHHHSCEECEEGGGGCSSCCCSCEEEEECCSCHHHHHHHHH
T ss_pred HHC-CCe-ecCCCceEEEEEecCCCC---CCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCEEEEEEcCCHHHHHHHHH
Confidence 987 777 446777899999886420 01466777777777899999998774 367999999988999999999
Q ss_pred HHHH
Q 014603 410 RMKA 413 (422)
Q Consensus 410 ~l~~ 413 (422)
+|++
T Consensus 382 ~l~~ 385 (386)
T 1u08_A 382 RLRQ 385 (386)
T ss_dssp HHTT
T ss_pred HHhh
Confidence 9864
No 24
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=100.00 E-value=6.7e-46 Score=350.24 Aligned_cols=364 Identities=24% Similarity=0.415 Sum_probs=305.8
Q ss_pred ccHHHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHH
Q 014603 16 ANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRA 95 (422)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ 95 (422)
++.|+..++.+.++.+.+...+.. ..++++|+|+.|.+. +++++.+.+++.+.+... ...|++..+.+++|++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~~~~~~l~~~ 74 (370)
T 2z61_A 2 LSKRLLNFESFEVMDILALAQKLE--SEGKKVIHLEIGEPD----FNTPKPIVDEGIKSLKEG-KTHYTDSRGILELREK 74 (370)
T ss_dssp CCHHHHHCCCCTTHHHHHHHHHHH--HTTCCCEECCCCSCS----SCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHH
T ss_pred hhhhhhhccccHHHHHHHHHHHHH--hcCCCEEEccCCCCC----CCCCHHHHHHHHHHHHcC-ccCCCCCCCCHHHHHH
Confidence 467889999999999887665432 137789999999965 456789999999988753 4578887889999999
Q ss_pred HHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHH
Q 014603 96 IADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDA 175 (422)
Q Consensus 96 ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~ 175 (422)
+++++++.+|..+++++|++|+|++++++.++++++++||+|++++|+|+++...++..|.+++.++ +|++.
T Consensus 75 la~~~~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~--------~d~~~ 146 (370)
T 2z61_A 75 ISELYKDKYKADIIPDNIIITGGSSLGLFFALSSIIDDGDEVLIQNPCYPCYKNFIRFLGAKPVFCD--------FTVES 146 (370)
T ss_dssp HHHHHHHHSSCCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEEC--------SSHHH
T ss_pred HHHHHHHHhCCCCChhhEEECCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEeC--------CCHHH
Confidence 9999998888788899999999999999999999999999999999999999999999999988776 58899
Q ss_pred HHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccC-CCCCeEEEecCc
Q 014603 176 VEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG-SIVPVLTLGSIS 254 (422)
Q Consensus 176 l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~-~~~~~i~i~s~s 254 (422)
|++.++++++++++++|+||||.+++.+ |.++|+++|+++|+||+|+.+.+++. ..++..+. ..++++++.|+|
T Consensus 147 l~~~l~~~~~~v~~~~p~nptG~~~~~~----l~~~~~~~~~~li~De~~~~~~~~g~-~~~~~~~~~~~~~~i~~~s~s 221 (370)
T 2z61_A 147 LEEALSDKTKAIIINSPSNPLGEVIDRE----IYEFAYENIPYIISDEIYNGLVYEGK-CYSAIEFDENLEKTILINGFS 221 (370)
T ss_dssp HHHHCCSSEEEEEEESSCTTTCCCCCHH----HHHHHHHHCSEEEEECTTTTCBSSSC-CCCGGGTCTTCSSEEEEEEST
T ss_pred HHHhcccCceEEEEcCCCCCcCcccCHH----HHHHHHHcCCEEEEEcchhhcccCCC-CcCHHHccCCCCcEEEEecCh
Confidence 9999988889999999999999999877 88999999999999999999887663 23444442 335689999999
Q ss_pred cccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhh-hccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHh
Q 014603 255 KRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRL 333 (422)
Q Consensus 255 K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L 333 (422)
|.++++|+|+||++++ +++++.+..... ...+++++.+.++.++|+...+.++++.+++++++++.+.+.|
T Consensus 222 K~~~~~G~r~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L 293 (370)
T 2z61_A 222 KLYAMTGWRIGYVISN--------DEIIEAILKLQQNLFISAPTISQYAALKAFEKETEREINSMIKEFDRRRRLVLKYV 293 (370)
T ss_dssp TTTTCGGGCCEEEECC--------HHHHHHHHHHHHHHTSSSCHHHHHHHGGGGSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hccCCccceEEEEEEC--------HHHHHHHHHHHhhcccCCCHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998899999999986 467777776553 3457888999998888874125678888999999999999999
Q ss_pred hcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEeccChHHHHHHHHHH
Q 014603 334 KEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAVEPSALEDGLGRM 411 (422)
Q Consensus 334 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRis~~~~~~~l~~~~~~l 411 (422)
+++ ++. +..|.+++++|+.++. +..++...+++++||.+.||..|+. .+++||+++++++++++++++|
T Consensus 294 ~~~-g~~-~~~~~~~~~~~~~~~~-------~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~Ri~~~~~~~~i~~~~~~l 364 (370)
T 2z61_A 294 KDF-GWE-VNNPIGAYYVFPNIGE-------DGREFAYKLLKEKFVALTPGIGFGSKGKNYIRISYANSYENIKEGLERI 364 (370)
T ss_dssp HHT-TCB-CCCCCBTTEECCBCSS-------CHHHHHHHHHHHHCEECEEGGGGCGGGSSBEEEECCSCHHHHHHHHHHH
T ss_pred HHc-CCe-ecCCCcceEEEEecCC-------CHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEeCCHHHHHHHHHHH
Confidence 988 777 4467778889988863 3567777776577999999988874 6899999999999999999999
Q ss_pred HHHHH
Q 014603 412 KAFYD 416 (422)
Q Consensus 412 ~~~~~ 416 (422)
.++++
T Consensus 365 ~~~l~ 369 (370)
T 2z61_A 365 KEFLN 369 (370)
T ss_dssp HHHHC
T ss_pred HHHHh
Confidence 98874
No 25
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=100.00 E-value=2.1e-46 Score=355.31 Aligned_cols=353 Identities=18% Similarity=0.323 Sum_probs=302.2
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 122 (422)
+++++|+|+.|++. ++++|.+.+++.+++.+. ...|++. ..++++.+++++.+.+|..+++++|++|+|++++
T Consensus 22 ~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a 94 (383)
T 3kax_A 22 KNEELIHAWIADMD----FEVPQPIQTALKKRIEHP-IFGYTLP--PENIGDIICNWTKKQYNWDIQKEWIVFSAGIVPA 94 (383)
T ss_dssp SSSCCEECCCSSCS----SCCCHHHHHHHHHHHHSC-CCCCCCC--CTTHHHHHHHHHHHHHCCCCCGGGEEEESCHHHH
T ss_pred CCCCeeecccccCC----CCCCHHHHHHHHHHHhcC-CCCCCCC--CHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHH
Confidence 46889999999854 688999999999998764 3467664 5799999999998877777888999999999999
Q ss_pred HHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCC-CcccCHHHHHHhhcCCceEEEEeCCCCCcccccC
Q 014603 123 IEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAK-GWEVDLDAVEALADENTVALVIINPGNPCGNVYT 201 (422)
Q Consensus 123 ~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~ 201 (422)
++.++.+++++||+|+++.|+|+++...++..|.+++.+++++.+ ++.+|++.|++.++++++++++++|+||||.++|
T Consensus 95 ~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~ 174 (383)
T 3kax_A 95 LSTSIQAFTKENESVLVQPPIYPPFFEMVTTNNRQLCVSPLQKQNDTYAIDFEHLEKQFQQGVKLMLLCSPHNPIGRVWK 174 (383)
T ss_dssp HHHHHHHHCCTTCEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTTTCCEEEEESSBTTTTBCCC
T ss_pred HHHHHHHhCCCCCEEEEcCCCcHHHHHHHHHcCCEEEeccceecCCcEEEcHHHHHHHhCcCCeEEEEeCCCCCCCcCcC
Confidence 999999999999999999999999999999999999999886433 3678999999999888999999999999999999
Q ss_pred HHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCC--CCCeEEEecCccccCCCCceeEEEEeeCCCCcccch
Q 014603 202 YQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS--IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDS 279 (422)
Q Consensus 202 ~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~--~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~ 279 (422)
.+++++|+++|+++|+++|+||+|+.+.++|....++..+.. .++++++.|+||.++++|+|+||+++++ +
T Consensus 175 ~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~-------~ 247 (383)
T 3kax_A 175 KEELTKLGSLCTKYNVIVVADEIHSDIIYADHTHTPFASLSEELAARTITCMAPSKTFNIAGLQASIIIIPN-------E 247 (383)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCC-------H
T ss_pred HHHHHHHHHHHHHCCCEEEEEccccccccCCCCceeHhhcCccccCcEEEEEEChhhccCcchhheEEEeCC-------H
Confidence 999999999999999999999999998888766666666554 3678999999999988999999999853 5
Q ss_pred hHHHHHHhhhhh--ccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCCCCCCCceEEEEecC
Q 014603 280 GIVDSIKSFLNI--SSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKE-IPCITCPKKPEGSMFVMVKLN 356 (422)
Q Consensus 280 ~~~~~~~~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~g~~~~~~~~ 356 (422)
++.+.+...... .++++++.+.++.++++. .+.++++.+++++++++.+.+.|++ +|++. +..|.++++.|+.++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~~ 325 (383)
T 3kax_A 248 KLRQAFTSIQYRQGFHGLNIFAYTAMQSAYTE-CNDWLNEIRFYIEDNAKFACEYIKDHIPTLS-VMKPEGSFLLWIDCS 325 (383)
T ss_dssp HHHHHHHHHHHHTTCCCCCHHHHHHHHHHTTT-CHHHHHHHHHHHHHHHHHHHHHHHHHCTTCE-ECCCSBSSEEEEECG
T ss_pred HHHHHHHHHHhhcccCCCCHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHHHHHhhCCCce-EecCCceEEEEEEcc
Confidence 677777766532 247788999999998876 3577888999999999999999998 78887 447888889999887
Q ss_pred cccccCCCCHHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEeccChHHHHHHHHHHHHHH
Q 014603 357 YSLLEGINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAVEPSALEDGLGRMKAFY 415 (422)
Q Consensus 357 ~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRis~~~~~~~l~~~~~~l~~~~ 415 (422)
... .+..++...+++++||.+.||..|+. .+++|++++++++++++++++|++++
T Consensus 326 ~~~----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~i~~~l~~l~~~l 382 (383)
T 3kax_A 326 ALN----LSQDERTKLLEEKGKIIVEPGEKYGLGGEEHIGINIGCPRSVLEEILNRLRHTF 382 (383)
T ss_dssp GGC----CCHHHHHHHHHHTSCEECEESGGGCTTCTTEEEEECSSCHHHHHHHHHHHHHHH
T ss_pred ccC----CCHHHHHHHHHhhCCEEeECchhhcCCCCCeEEEEEcCCHHHHHHHHHHHHHHh
Confidence 521 25677877776678999999988876 58999999999999999999999876
No 26
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=100.00 E-value=5.2e-46 Score=360.03 Aligned_cols=385 Identities=16% Similarity=0.228 Sum_probs=307.7
Q ss_pred ccccHHHhhccCccH-HHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhC----CCCCCCCCCCC
Q 014603 14 FKANEELKTASGITV-RGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRS----ARFNCYSSTVG 88 (422)
Q Consensus 14 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~----~~~~~y~~~~g 88 (422)
..++.++..+.+... +.+...........++.++|||++|+++ ++.+|.+.+++.+++.. .....|++..+
T Consensus 37 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~----~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g 112 (449)
T 3qgu_A 37 VQRNENFGKLRAGYLFPEIARRRKAHQEKNPDAKIISLGIGDTT----EPLPKYIADAMAKAAAGLATREGYSGYGAEQG 112 (449)
T ss_dssp CCCCHHHHHCCSCCHHHHHHHHHHHHHHHCTTCCCEECSSCCCC----CCCCHHHHHHHHHHHHGGGGSCCCCCSTTTTC
T ss_pred hhhhHHHHhCCCcchHHHHHHHHHHHHhhCCCCCEEEeeCCCCC----CCCCHHHHHHHHHHHHhhccccCCCCCCCCCC
Confidence 345667777777544 4566555544444468899999999855 67889999999998873 33457888889
Q ss_pred CHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCe----------E
Q 014603 89 ILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLE----------V 158 (422)
Q Consensus 89 ~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~----------~ 158 (422)
.+++|+++++++. +|+++++++|++|+|+++++..+ .+++++||+|++++|+|+++...++..|.+ +
T Consensus 113 ~~~lr~~ia~~~~--~g~~~~~~~i~~t~G~~~al~~~-~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~g~~~~~~~~~~ 189 (449)
T 3qgu_A 113 QGALREAVASTFY--GHAGRAADEIFISDGSKCDIARI-QMMFGSKPTVAVQDPSYPVYVDTSVMMGMTGDHNGTGFDGI 189 (449)
T ss_dssp CHHHHHHHHHHHH--TTTTCCGGGEEEESCHHHHHHHH-HHHHCSSSCEEEEESCCTHHHHHHHHHTCSCCBCSSSBTTE
T ss_pred cHHHHHHHHHHHH--cCCCCCHHHEEEccCHHHHHHHH-HHHhCCCCEEEEcCCCChhHHHHHHHcCCccccccccccee
Confidence 9999999999997 67778889999999999999998 888899999999999999999999999988 8
Q ss_pred EEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCc
Q 014603 159 RHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPM 238 (422)
Q Consensus 159 ~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~ 238 (422)
+.+++++.+++..+++.+ ++++++++++|+||||.+++.+++++|+++|+++|+++|+||+|+.+.+++....++
T Consensus 190 ~~~~~~~~~~~~~~~~~~-----~~~~~v~l~~p~NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~ 264 (449)
T 3qgu_A 190 EYMVCNPDNHFFPDLSKA-----KRTDIIFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTI 264 (449)
T ss_dssp EEEECCGGGTTCCCGGGC-----CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSG
T ss_pred EEEecccccCCcCChhHc-----CCCCEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCH
Confidence 889887655555555432 578899999999999999999999999999999999999999999998877655566
Q ss_pred cccCC-CCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhh-hhccCcchHHHHHHHHHHhhchHHHHH
Q 014603 239 GVFGS-IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQGAVPQILEKTEEEFFS 316 (422)
Q Consensus 239 ~~~~~-~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~ 316 (422)
..+.. .++++++.|+||.|+++|+|+||+++++.........+...+.... ..+++++++.+.++.++++.....+++
T Consensus 265 ~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~ 344 (449)
T 3qgu_A 265 YEIPGADEVAIETCSFSKYAGFTGVRLGWTVVPKALKYANGEPVHADWNRVMTTCFNGASNIVQAGGLACLQPEGLKEMN 344 (449)
T ss_dssp GGSTTGGGTEEEEEECSGGGTCTTCCCEEEECCTTCBCTTSCBHHHHHHHHHHHSCCCCCHHHHHHHHHHTSHHHHHHHH
T ss_pred hhccCCCCcEEEEecchhhcCCccceeEEEecCHHHHhhhhhhHHHHHHHHhhcccCCCCHHHHHHHHHHHhhcCHHHHH
Confidence 55543 3567999999999999999999999864221000001122333333 233477889999999998864456788
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC--CCeEE
Q 014603 317 KITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL--KDWLR 394 (422)
Q Consensus 317 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iR 394 (422)
+.+++++++++.+.+.|+++ ++. +..+.+++|+|+.++ . .++.+++..+++++||.+.||..|+. ++++|
T Consensus 345 ~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~-~-----~~~~~~~~~l~~~~gI~v~pg~~f~~~~~~~iR 416 (449)
T 3qgu_A 345 AMIKFYKENAQILKTTFTEM-GFS-VYGGDDAPYIWVGFP-G-----KPSWDVFAEILERCNIVTTPGSGYGPAGEGFVR 416 (449)
T ss_dssp HHHHHHHHHHHHHHHHHHHT-TCC-EEESSSSSEEEEECT-T-----SCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEE
T ss_pred HHHHHHHHHHHHHHHHHHHC-CCe-eeCCCCeeEEEEECC-C-----CCHHHHHHHHHHHCCEEEecchHhCCCCCCeEE
Confidence 89999999999999999998 777 446778999999987 2 25778888888778999999998875 68999
Q ss_pred EEeccChHHHHHHHHHHHHHHHHh
Q 014603 395 ITFAVEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 395 is~~~~~~~l~~~~~~l~~~~~~~ 418 (422)
|++..+++++++++++|++++++.
T Consensus 417 is~~~~~e~i~~~l~~l~~~~~~~ 440 (449)
T 3qgu_A 417 ASAFGSRENILEAVRRFKEAYGKR 440 (449)
T ss_dssp EECCSCHHHHHHHHHHHHHHHC--
T ss_pred EEecCCHHHHHHHHHHHHHHHHhc
Confidence 999889999999999999988654
No 27
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=100.00 E-value=6.8e-46 Score=354.74 Aligned_cols=386 Identities=20% Similarity=0.321 Sum_probs=314.5
Q ss_pred cCccccHHHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCC--CCCCCCCCCCC
Q 014603 12 WGFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSA--RFNCYSSTVGI 89 (422)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~g~ 89 (422)
+.+.++.|+..+.++.++.+++...+. ...|.++|||+.|.+.. ...+++.+.+++.+++... ... |++..+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~g~~~idl~~g~~~~--~~~~~~~v~~a~~~~~~~~~~~~~-y~~~~~~ 77 (407)
T 2zc0_A 3 YTKYLAGRANWIKGSALADVMKKASEL--QKKGVKLISLAAGDPDP--ELIPRAVLGEIAKEVLEKEPKSVM-YTPANGI 77 (407)
T ss_dssp GGGGSCGGGGGCCCCHHHHHHHHHHHH--HHSSCCCEECCSCCCCT--TTSCHHHHHHHHHHHHHHCGGGGS-CCCTTCC
T ss_pred chhhhhhhhccCCchHHHHHHHhhhcc--cCCCCceEeCCCCCCCc--hhCCHHHHHHHHHHHHhhcccccc-CCCCCCC
Confidence 444577888888888888888755422 11356899999998762 2346789999999888653 234 8887889
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCc
Q 014603 90 LPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGW 169 (422)
Q Consensus 90 ~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 169 (422)
.++|+++++++.+.+|.++++++|++|+|+++|++.++++++++||+|+++.|+|+++...++..|.+++.++.+++
T Consensus 78 ~~l~~~la~~~~~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~--- 154 (407)
T 2zc0_A 78 PELREELAAFLKKYDHLEVSPENIVITIGGTGALDLLGRVLIDPGDVVITENPSYINTLLAFEQLGAKIEGVPVDND--- 154 (407)
T ss_dssp HHHHHHHHHHHHHHSCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEEEEETT---
T ss_pred HHHHHHHHHHHHHhcCCCCCcceEEEecCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCEEEEcccCCC---
Confidence 99999999999877776678899999999999999999999999999999999999999999999999999987542
Q ss_pred ccCHHHHHHhhc----C--CceEE-EEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccC
Q 014603 170 EVDLDAVEALAD----E--NTVAL-VIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG 242 (422)
Q Consensus 170 ~~d~~~l~~~~~----~--~~~~i-~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~ 242 (422)
++|++.|++.++ + +++++ ++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++....++..++
T Consensus 155 ~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 234 (407)
T 2zc0_A 155 GMRVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALD 234 (407)
T ss_dssp EECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSSCCCGGGGC
T ss_pred CCCHHHHHHHHHhhhcccCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECCCcccccCCCCCCChhhcC
Confidence 389999999887 5 67776 4678999999999999999999999999999999999999888765545565665
Q ss_pred CCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhhh-ccCcchHHHHHHHHHHhhch-H-HHHHHHH
Q 014603 243 SIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQGAVPQILEKTE-E-EFFSKIT 319 (422)
Q Consensus 243 ~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~-~-~~~~~~~ 319 (422)
..++++++.|+||+++ +|+|+||++++ +++++.+...... ..+++++.+.++..+++... + .++++.+
T Consensus 235 ~~~~~i~~~s~sK~~~-~G~r~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 305 (407)
T 2zc0_A 235 NEGRVIVAGTLSKVLG-TGFRIGWIIAE--------GEILKKVLMQKQPIDFCAPAISQYIALEYLKRGYFEKYHLEGAL 305 (407)
T ss_dssp SSCCEEEEEESTTTTC-TTSCCEEEECC--------HHHHHHHHHHHTTTTSSSCHHHHHHHHHHHHTTHHHHHTTTTHH
T ss_pred CCCCEEEEcccccccC-CCcceEEEecC--------HHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHcCCchHHHHHHHH
Confidence 5567899999999987 99999999985 4677877765532 34567889999998887642 3 5677888
Q ss_pred HHHHHHHHHHHHHhhc-CCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC----CCeEE
Q 014603 320 DILRETADICCDRLKE-IPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL----KDWLR 394 (422)
Q Consensus 320 ~~~~~~~~~l~~~L~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~----~~~iR 394 (422)
++++++++.+.+.|++ .|++. +..|.+++++|+.++.. .+..++...+.+++||.+.||..|.. .+++|
T Consensus 306 ~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~~~~~~~~~-----~~~~~l~~~l~~~~gi~v~~g~~~~~~~~~~~~iR 379 (407)
T 2zc0_A 306 LGYKEKRDIMLKALENHLPNAE-FTKPIAGMFVMFFLPEG-----ADGISFANELMEREGVVVVPGKPFYTDESGKNAIR 379 (407)
T ss_dssp HHHHHHHHHHHHHHHHHCTTSC-BCCCSBSSEEEEECSTT-----CCHHHHHHHHHHHTCEECBCSGGGCSSSCCTTEEE
T ss_pred HHHHHHHHHHHHHHHHhCCCCE-EecCCCcEEEEEEcCCC-----CCHHHHHHHHHHhCCeEEECchhccCCCCCCCeEE
Confidence 8999999999999987 57776 44677889999998642 25677777776666999999988753 57999
Q ss_pred EEecc-ChHHHHHHHHHHHHHHHHhcc
Q 014603 395 ITFAV-EPSALEDGLGRMKAFYDRHAK 420 (422)
Q Consensus 395 is~~~-~~~~l~~~~~~l~~~~~~~~~ 420 (422)
|+++. +++++++++++|+++++++.+
T Consensus 380 is~~~~~~~~i~~~~~~l~~~l~~~~~ 406 (407)
T 2zc0_A 380 LNFSRPSKEEIPIGIKKLAKLYKEKFG 406 (407)
T ss_dssp EECSSSCTTHHHHHHHHHHHHHHHHC-
T ss_pred EEeCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 99985 789999999999999987654
No 28
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=6.3e-46 Score=355.06 Aligned_cols=379 Identities=23% Similarity=0.367 Sum_probs=313.6
Q ss_pred cccHHHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHH
Q 014603 15 KANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARR 94 (422)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~ 94 (422)
.++.|+...+++.++.+...+.+.. .+++++|+|+.|.+. ++.++.+.+++ +++... ...|++..+..++|+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~i~l~~~~~~----~~~~~~v~~a~-~~l~~~-~~~y~~~~g~~~l~~ 86 (409)
T 2gb3_A 15 VFSDRVLLTEESPIRKLVPFAEMAK--KRGVRIHHLNIGQPD----LKTPEVFFERI-YENKPE-VVYYSHSAGIWELRE 86 (409)
T ss_dssp -CCHHHHSCCCCTTGGGHHHHHHHH--HTTCEEEECSSCCCC----SCCCTHHHHHH-HHTCCS-SCCCCCTTCCHHHHH
T ss_pred HHHHHhhcCCccHHHHHHHHHHHHH--hcCCCEEeccCCCCC----CCCCHHHHHHH-HHHhcC-CCCCCCCCCcHHHHH
Confidence 4688999999999988887555432 247889999999964 45678999999 887653 357888788999999
Q ss_pred HHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHH
Q 014603 95 AIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLD 174 (422)
Q Consensus 95 ~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 174 (422)
++++++++.+|.++++++|++|+|+++|++.++++++++||+|+++.|+|+++...++..|.+++.++.++++++.+ ++
T Consensus 87 ~la~~~~~~~g~~~~~~~v~~~~g~t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~-~~ 165 (409)
T 2gb3_A 87 AFASYYKRRQRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEPFYANYNAFAKIAGVKLIPVTRRMEEGFAI-PQ 165 (409)
T ss_dssp HHHHHHHHTSCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHHTCEEEEEECCGGGTSCC-CT
T ss_pred HHHHHHHHHhCCCCCHHHEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEeccCCCCCCcc-HH
Confidence 99999998788778889999999999999999999999999999999999999999999999999998865344445 88
Q ss_pred HHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCc-cccCCCCCeEEEecC
Q 014603 175 AVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPM-GVFGSIVPVLTLGSI 253 (422)
Q Consensus 175 ~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~-~~~~~~~~~i~i~s~ 253 (422)
.|++.++++++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++. ..++ ..+ .+++++++|+
T Consensus 166 ~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~~-~~~~~~~~--~~~~i~~~s~ 242 (409)
T 2gb3_A 166 NLESFINERTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGE-FASALSIE--SDKVVVIDSV 242 (409)
T ss_dssp TGGGGCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSC-CCCGGGSC--CTTEEEEEES
T ss_pred HHHHhhCcCCeEEEECCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEECcccccccCCC-CCCccccC--CCCEEEEecc
Confidence 99998888899999999999999999999999999999999999999999999877653 2222 211 2457999999
Q ss_pred ccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHh
Q 014603 254 SKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRL 333 (422)
Q Consensus 254 sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L 333 (422)
||.++++|+|+||+++++ +++.+.+........+++++.+.++.++|+. ...++++.+++++++++.+.+.|
T Consensus 243 sK~~g~~G~r~G~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L 314 (409)
T 2gb3_A 243 SKKFSACGARVGCLITRN-------EELISHAMKLAQGRLAPPLLEQIGSVGLLNL-DDSFFDFVRETYRERVETVLKKL 314 (409)
T ss_dssp TTTTTCGGGCCEEEECSC-------HHHHHHHHHHHHHSCCCCHHHHHHHHHHHTC-CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhccCCccceEEEEEECc-------HHHHHHHHHHHhccCCCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHH
Confidence 999988999999999863 2677777665533216788899999999965 35678888999999999999999
Q ss_pred hcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHh-----cCeEEecCCCCCC-----CCeEEEEeccChHH
Q 014603 334 KEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKE-----ESVIVLPGITVGL-----KDWLRITFAVEPSA 403 (422)
Q Consensus 334 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----~gi~v~~g~~~~~-----~~~iRis~~~~~~~ 403 (422)
+++ ++.++..|.+++++|+.++. .+..++...++++ +||.+.||..|+. .+++||++++++++
T Consensus 315 ~~~-g~~~~~~~~~~~~~~~~~~~------~~~~~l~~~l~~~~~~~~~gi~v~~g~~f~~~~~~~~~~iRis~~~~~e~ 387 (409)
T 2gb3_A 315 EEH-GLKRFTKPSGAFYITAELPV------EDAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIACVLEKDL 387 (409)
T ss_dssp HHT-TCCCBCCCSBSSEEEEECSS------SCHHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEEECCSCHHH
T ss_pred HHc-CceeeeCCCeeEEEEEEeCC------CCHHHHHHHHHhccccccCcEEEeCchHhCCCCCCCCCEEEEEeCCCHHH
Confidence 988 77741467888999988862 1567777777665 5999999987753 67999999999999
Q ss_pred HHHHHHHHHHHHHHhcc
Q 014603 404 LEDGLGRMKAFYDRHAK 420 (422)
Q Consensus 404 l~~~~~~l~~~~~~~~~ 420 (422)
+++++++|+++++++++
T Consensus 388 i~~~~~~l~~~l~~~~~ 404 (409)
T 2gb3_A 388 LSRAIDVLMEGLKMFCS 404 (409)
T ss_dssp HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhhh
Confidence 99999999999988754
No 29
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=100.00 E-value=5.9e-47 Score=364.57 Aligned_cols=382 Identities=21% Similarity=0.360 Sum_probs=309.1
Q ss_pred ccccHHHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCC--CCCCCCCCCCCHH
Q 014603 14 FKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSA--RFNCYSSTVGILP 91 (422)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~ 91 (422)
+.+++|+...+.+.++.+.+.. ...++|||+.|.++ +++++.+.+++.+++... ....|++..+..+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~-------~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~ 81 (429)
T 1yiz_A 13 FDLPKRYQGSTKSVWVEYIQLA-------AQYKPLNLGQGFPD----YHAPKYALNALAAAANSPDPLANQYTRGFGHPR 81 (429)
T ss_dssp CCSSSSCCCCTTCHHHHHHHHH-------HHHCCEECCSSSCS----SCCCHHHHHHHHHHHTCSCGGGGSCCCSSCCHH
T ss_pred cchhHHhhhCCchHHHHHHHHh-------ccCCEEEecCCCCC----CCCCHHHHHHHHHHHhccccCccCCCCCCCcHH
Confidence 4455566666655444443321 13568999999865 467899999999988652 2347888778999
Q ss_pred HHHHHHHHHhhcCCCCCCCC-CEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCC---
Q 014603 92 ARRAIADYLNRDLPYKLSPD-DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAK--- 167 (422)
Q Consensus 92 lr~~ia~~l~~~~~~~~~~~-~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--- 167 (422)
+|+++++++.+.+|.+++++ +|++|+|++++++.++++++++||+|+++.|+|+++...++..|.+++.++.++++
T Consensus 82 l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~ 161 (429)
T 1yiz_A 82 LVQALSKLYSQLVDRTINPMTEVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGG 161 (429)
T ss_dssp HHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCSSS
T ss_pred HHHHHHHHHHHHhCCCCCCcCCEEEecChHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEEeCCcccccc
Confidence 99999999987767677888 99999999999999999999999999999999999999999999999999986542
Q ss_pred -----CcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccC
Q 014603 168 -----GWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG 242 (422)
Q Consensus 168 -----~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~ 242 (422)
++.+|++.|++.++++++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++....++..+.
T Consensus 162 ~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~ 241 (429)
T 1yiz_A 162 TISSADWVLDNNELEALFNEKTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLP 241 (429)
T ss_dssp SEEGGGCBCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGGGST
T ss_pred cccccCcccCHHHHHHHhccCceEEEECCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCcChhhcc
Confidence 567899999999988899999999999999999999999999999999999999999999888765544554443
Q ss_pred -CCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhh-hccCcchHHHHHHHHHHhh-----ch-HHH
Q 014603 243 -SIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQGAVPQILEK-----TE-EEF 314 (422)
Q Consensus 243 -~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~-----~~-~~~ 314 (422)
..++++++.|+||.|+++|+|+||++++ +++++.+..... .+.+++++.+.++.++|+. .. +.+
T Consensus 242 ~~~~~~~~~~s~sK~~~~~G~r~G~~~~~--------~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 313 (429)
T 1yiz_A 242 GMWERTITIGSAGKTFSLTGWKIGWAYGP--------EALLKNLQMVHQNCVYTCATPIQEAIAVGFETELKRLKSPECY 313 (429)
T ss_dssp TTGGGEEEEEEHHHHHTCGGGCCEEEESC--------HHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSH
T ss_pred CCcCceEEEecchhccCCCCcceEEEEeC--------HHHHHHHHHHHhhcccCCChHHHHHHHHHHhcccccccchHHH
Confidence 3456899999999998899999999986 467777776543 3457788899999888876 31 467
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccc-------cCCCCHHHHHHHHHHhcCeEEecCCCC
Q 014603 315 FSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLL-------EGINSDMEFALKLAKEESVIVLPGITV 387 (422)
Q Consensus 315 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~-------~~~~~~~~~~~~l~~~~gi~v~~g~~~ 387 (422)
+++.+++++++++.+.+.|+++ ++. +..|.+|+|+|++++.... .+..+..++...+++++||.+.||..|
T Consensus 314 ~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~~g~~f 391 (429)
T 1yiz_A 314 FNSISGELMAKRDYMASFLAEV-GMN-PTVPQGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAF 391 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-TCE-EEECSBSSEEEEECCSSCTTTTCCSSSSSCHHHHHHHHHHHHTSEECBCGGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHhC-CCc-ccCCCcceEEEEEcccccccccccccccCCCHHHHHHHHHHhCCEEEeCchHh
Confidence 8889999999999999999987 666 4367778999999864200 000134567777776789999999877
Q ss_pred CC-------CCeEEEEeccChHHHHHHHHHHHHHHH
Q 014603 388 GL-------KDWLRITFAVEPSALEDGLGRMKAFYD 416 (422)
Q Consensus 388 ~~-------~~~iRis~~~~~~~l~~~~~~l~~~~~ 416 (422)
+. .+++||+++.++++|++++++|+++++
T Consensus 392 ~~~~~~~~~~~~iRis~~~~~e~i~~~l~~l~~~l~ 427 (429)
T 1yiz_A 392 YSEPNKHLGEDFVRYCFFKKDENLQKAAEILRKWKG 427 (429)
T ss_dssp SCGGGGGGTTTEEEEECCSCHHHHHHHHHHHHHHSC
T ss_pred CCCcccCCCCCeEEEEecCCHHHHHHHHHHHHHhcc
Confidence 52 579999999999999999999998764
No 30
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=100.00 E-value=4.6e-46 Score=354.97 Aligned_cols=356 Identities=15% Similarity=0.256 Sum_probs=298.4
Q ss_pred CCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHH
Q 014603 45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIE 124 (422)
Q Consensus 45 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~ 124 (422)
+++|+|+.|++. +++++.+.+++.+++... ...|++. ..++|+++++++.+.+|.++++++|++|+|+++|++
T Consensus 31 ~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~a~~ 103 (399)
T 1c7n_A 31 NEVVPLSVADME----FKNPPELIEGLKKYLDET-VLGYTGP--TEEYKKTVKKWMKDRHQWDIQTDWIINTAGVVPAVF 103 (399)
T ss_dssp TTCCCCCSSSCS----SCCCHHHHHHHHHHHHHC-CCSSBCC--CHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHH
T ss_pred CCceeeeecCCC----CCCCHHHHHHHHHHHhcC-CCCCCCC--cHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHH
Confidence 579999999854 567899999999988653 3477764 899999999999876676678899999999999999
Q ss_pred HHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCC-CcccCHHHHHHhhc-CCceEEEEeCCCCCcccccCH
Q 014603 125 VILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAK-GWEVDLDAVEALAD-ENTVALVIINPGNPCGNVYTY 202 (422)
Q Consensus 125 ~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~d~~~l~~~~~-~~~~~i~i~~p~nptG~~~~~ 202 (422)
.++++++++||+|+++.|+|+++...+...|.+++.++.++.+ ++.+|++.|++.++ ++++++++++|+||||.++|.
T Consensus 104 ~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~ 183 (399)
T 1c7n_A 104 NAVREFTKPGDGVIIITPVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVWKK 183 (399)
T ss_dssp HHHHHHCCTTCEEEECSSCCTHHHHHHHTTTCEEEECCCEEETTEEECCHHHHHHHHTCTTEEEEEEESSBTTTTBCCCH
T ss_pred HHHHHhcCCCCEEEEcCCCcHhHHHHHHHcCCEEEecccccCCCCEEEcHHHHHHHhccCCCcEEEEcCCCCCCCcCcCH
Confidence 9999999999999999999999999999999999988875332 46689999999887 678999999999999999999
Q ss_pred HHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCC--CCCeEEEecCccccCCCCceeEEEEeeCCCCcccchh
Q 014603 203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS--IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSG 280 (422)
Q Consensus 203 ~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~--~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~ 280 (422)
+++++|+++|+++|+++|+||+|+.+.+++....++..+.. .++++++.|+||.++++|+|+||+++++ ++
T Consensus 184 ~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~-------~~ 256 (399)
T 1c7n_A 184 DELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKN-------PD 256 (399)
T ss_dssp HHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCC-------HH
T ss_pred HHHHHHHHHHHHcCCEEEEEccccccccCCCCcccHHHcCccccCcEEEEEeChhhccccchheEEEEECC-------HH
Confidence 99999999999999999999999998887755555555543 3568999999999988999999999863 35
Q ss_pred HHHHHHhhhhhc--cCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCCCCCCCceEEEEecCc
Q 014603 281 IVDSIKSFLNIS--SDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKE-IPCITCPKKPEGSMFVMVKLNY 357 (422)
Q Consensus 281 ~~~~~~~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~g~~~~~~~~~ 357 (422)
+++++....... ++++++.+.++.++|+.. +.++++.+++++++++.+.+.|++ +|++. +..+.+++++|+.++.
T Consensus 257 ~~~~l~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~~~~~~~~ 334 (399)
T 1c7n_A 257 IRERFTKSRDATSGMPFTTLGYKACEICYKEC-GKWLDGCIKVIDKNQRIVKDFFEVNHPEIK-APLIEGTYLQWIDFRA 334 (399)
T ss_dssp HHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHCTTSB-CCCCSBSSEEEEECGG
T ss_pred HHHHHHHHHhhcccCCCCHHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHhhCCCCe-EecCCceEEEEEEccc
Confidence 777777665432 367888999988888753 577888999999999999999998 88887 4467778888998864
Q ss_pred ccccCCCCHHHHHHHHHHhcCeEEecCCCCC--CCCeEEEEeccChHHHHHHHHHHHHHHHHhcc
Q 014603 358 SLLEGINSDMEFALKLAKEESVIVLPGITVG--LKDWLRITFAVEPSALEDGLGRMKAFYDRHAK 420 (422)
Q Consensus 358 ~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~--~~~~iRis~~~~~~~l~~~~~~l~~~~~~~~~ 420 (422)
.. .+..++...+++++||.+.||..|+ .++++||+++.+++++++++++|.++++++.+
T Consensus 335 ~~----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~~~~l~~~l~~l~~~l~~~~~ 395 (399)
T 1c7n_A 335 LK----MDHKAMEEFMIHKAQIFFDEGYIFGDGGIGFERINLAAPSSVIQESLERLNKALKDLKN 395 (399)
T ss_dssp GC----CCHHHHHHHHHHTTCCCCEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHHHHC-
T ss_pred CC----CCHHHHHHHHHHhCCEEEeCccccCCCCCCeEEEEeccCHHHHHHHHHHHHHHHHHHHh
Confidence 21 1466777777657899999998886 36899999997789999999999999988754
No 31
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=100.00 E-value=4.5e-46 Score=363.88 Aligned_cols=370 Identities=21% Similarity=0.334 Sum_probs=298.8
Q ss_pred CceeecCCCCCCCCCCC-------------------------CcHHHHHHHHHHhhCC---CCCCCCCCCCCHHHHHHHH
Q 014603 46 PLIPLGHGDPSAFPSFR-------------------------TASVAVDAIVHSVRSA---RFNCYSSTVGILPARRAIA 97 (422)
Q Consensus 46 ~~i~l~~g~~~~~~~~~-------------------------~~~~v~~a~~~~~~~~---~~~~y~~~~g~~~lr~~ia 97 (422)
.+|+.++|+|......| .|+.+.+++.+.+... ....|++..|.+++|++++
T Consensus 65 ~~i~~~iG~~~~~~~~p~~~~~~~~~~~~~p~~i~~~~~~~~~p~~~~~~a~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia 144 (500)
T 3tcm_A 65 EILYCNIGNPQSLGQQPVTFFREVLALCDHPDLLQREEIKTLFSADSISRAKQILAMIPGRATGAYSHSQGIHGLRDAIA 144 (500)
T ss_dssp SCEECSSCCGGGTTCCCCHHHHHHHHHHHSGGGGGCTTHHHHSCHHHHHHHHHHHTTSTTSCSSSCCCTTCCHHHHHHHH
T ss_pred HhhhhcCcChhhcCCCCCcHHHHHHHhhcCcccccCCCCcccCCHHHHHHHHHHHHcCCCCcCCCcCCCcChHHHHHHHH
Confidence 78999999875322211 3455666666666652 4568999999999999999
Q ss_pred HHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhc-CCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHH
Q 014603 98 DYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLA-RPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAV 176 (422)
Q Consensus 98 ~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~-~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l 176 (422)
+++.+..|.++++++|++|+|+++++..++.+++ ++||+|+++.|+|+++...++..|.+++.++++.+++|.+|++.|
T Consensus 145 ~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l 224 (500)
T 3tcm_A 145 SGIASRDGFPANADDIFLTDGASPGVHLMMQLLIRNEKDGILVPIPQYPLYSASIALHGGALVPYYLNESTGWGLETSDV 224 (500)
T ss_dssp HHHHHHHSSCCCGGGEEEESSSHHHHHHHHHHHCCSTTEEEEEEESCCTHHHHHHHHTTCEEEEEECBTTTTSBCCHHHH
T ss_pred HHHHhhcCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCEEEEeCCCcHhHHHHHHHcCCEEEEEecccccCCCCCHHHH
Confidence 9999888888899999999999999999999998 899999999999999999999999999999998777889999999
Q ss_pred HHhhcC------CceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCC-CCCCcc----cc---C
Q 014603 177 EALADE------NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNT-PFVPMG----VF---G 242 (422)
Q Consensus 177 ~~~~~~------~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~-~~~~~~----~~---~ 242 (422)
++.+++ +++++++++|+||||.++|.+++++|+++|+++|+++|+||+|..+.|++. ...++. .+ .
T Consensus 225 ~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~~i~~la~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~~~ 304 (500)
T 3tcm_A 225 KKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGE 304 (500)
T ss_dssp HHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTTCSS
T ss_pred HHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccccccCCCCCCCcHHHHHHHhcccc
Confidence 998875 688999999999999999999999999999999999999999999888542 333432 22 2
Q ss_pred CCCCeEEEecCcccc-CCCCceeEEEEeeCCCCcccchhHHHHHHhhhhhccCcchHHHHHHHHHHhhc---------hH
Q 014603 243 SIVPVLTLGSISKRW-IVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQGAVPQILEKT---------EE 312 (422)
Q Consensus 243 ~~~~~i~i~s~sK~~-~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---------~~ 312 (422)
.+.++++++|+||.| +.+|+|+||+++.... +++++.+........+++.+.|.++..+++.. ..
T Consensus 305 ~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~-----~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~ 379 (500)
T 3tcm_A 305 EDLPLVSYQSVSKGYYGECGKRGGYFEITGFS-----APVREQIYKIASVNLCSNITGQILASLVMNPPKASDESYASYK 379 (500)
T ss_dssp SCCCEEEEEESSSTTTCCGGGCCEEEEEESCC-----TTHHHHHHHHHHTTCCCCHHHHHHHHHHHSCCCSSSTHHHHHH
T ss_pred CCeEEEEEecCCccCCCCCccceEEEEEeCCC-----HHHHHHHHHHHhcccCCCHHHHHHHHHHhcCccccchhHHHHH
Confidence 233579999999998 7899999999983211 46788887766656678889999998888631 13
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCccc-------ccCCCCHHHHHHHHHHhcCeEEecCC
Q 014603 313 EFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSL-------LEGINSDMEFALKLAKEESVIVLPGI 385 (422)
Q Consensus 313 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~-------~~~~~~~~~~~~~l~~~~gi~v~~g~ 385 (422)
.+.++.+++++++++.+.+.|+++|++. +..|.+++|+|+++..+. ..+..++..++..+++++||.+.||.
T Consensus 380 ~~~~~~~~~l~~~~~~l~~~L~~~~g~~-~~~~~g~~~~~~~~~lp~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~ 458 (500)
T 3tcm_A 380 AEKDGILASLARRAKALEHAFNKLEGIT-CNEAEGAMYVFPQICLPQKAIEAAKAANKAPDAFYALRLLESTGIVVVPGS 458 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSTTEE-CCCCCBTTEECCEECCCHHHHHHHHHHTSCHHHHHHHHHHHHHCEECEEST
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCcE-EecCCeEEEEeeeecCchhhHHHHHhcCCCcHHHHHHHHHHHCCEEEEeCc
Confidence 4567778889999999999999998988 448899999996553210 00111233345677788899999999
Q ss_pred CCCC---CCeEEEEeccChHHHHHHHHHHHHHHHHhccc
Q 014603 386 TVGL---KDWLRITFAVEPSALEDGLGRMKAFYDRHAKK 421 (422)
Q Consensus 386 ~~~~---~~~iRis~~~~~~~l~~~~~~l~~~~~~~~~~ 421 (422)
.|+. .+++|++++.+++++++++++|+++++++.++
T Consensus 459 ~f~~~~g~~~iRis~~~~~e~i~~~i~~l~~~~~~~~~~ 497 (500)
T 3tcm_A 459 GFGQVPGTWHFRCTILPQEDKIPAVISRFTVFHEAFMSE 497 (500)
T ss_dssp TTCCCTTCCBEEEESCSCTTTHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9975 45899999988899999999999999887543
No 32
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=100.00 E-value=1.5e-46 Score=356.18 Aligned_cols=369 Identities=14% Similarity=0.127 Sum_probs=288.8
Q ss_pred HHHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCC-CCCCCCCCcHHHHHHHHHHh-hCCCCCCCCCCCCCHHHHHH
Q 014603 18 EELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDP-SAFPSFRTASVAVDAIVHSV-RSARFNCYSSTVGILPARRA 95 (422)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~v~~a~~~~~-~~~~~~~y~~~~g~~~lr~~ 95 (422)
+++...+++.++++...+++. ..+++|||+.|.+ +..+.+++++.+.+++. .+ .......|.+..|.+++|++
T Consensus 6 ~~~~~~~~~~i~~~~~~~~~~----~~~~~I~l~~G~~~d~~~~~~~~~~v~~a~~-~~~~~~~~~~Y~~~~G~~~lr~a 80 (405)
T 3k7y_A 6 SSLENIEVDNILKTAREFKED----TCEEKINLSIGVCCNDDGDLHIFDSVLNADK-LVTENYKEKPYLLGNGTEDFSTL 80 (405)
T ss_dssp GGCCCCCCCHHHHHHHHHTTS----SCSSCEECSCSSCBCTTSSBCCCHHHHHHHH-HHHHHCCCCCCCTTSSCHHHHHH
T ss_pred hcCCCCCCChHHHHHHHHhcC----CCcCcEEeeeeeeECCCCCCcccHHHHHHHH-HhcCCCCCCCCCCCCCcHHHHHH
Confidence 378889999999999877654 3578999999974 22233567889998877 43 33445689999999999999
Q ss_pred HHHHHhhcCCCCCCCCC--EEEecCHHHHHHHHHHHhcC--CCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCccc
Q 014603 96 IADYLNRDLPYKLSPDD--VYLTLGCTQAIEVILTVLAR--PGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEV 171 (422)
Q Consensus 96 ia~~l~~~~~~~~~~~~--i~~~~g~~~a~~~~~~~l~~--~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 171 (422)
+++++.+..+..+++++ +++|+|+++|+..++.+++. + |+|++++|+|.+|...++..|.+++.+++..++++++
T Consensus 81 ia~~~~~~~~~~~~~~~i~i~~t~G~~~al~~~~~~l~~~~~-d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~ 159 (405)
T 3k7y_A 81 TQNLIFGNNSKYIEDKKICTIQCIGGTGAIFVLLEFLKMLNV-ETLYVTNPPYINHVNMIESRGFNLKYINFFDYNLIDI 159 (405)
T ss_dssp HHHHHHCSSCTTTTTTCEEEEEEEHHHHHHHHHHHHHHTTTC-CEEEEESSCCHHHHHHHHTTTCEEEEECCEETTTTEE
T ss_pred HHHHHcCCCCccccccceEEEEcCchHHHHHHHHHHHHhcCC-CEEEEeCCCCHhHHHHHHHcCCeEEEEeccccccCCc
Confidence 99999766555566665 58999999999999999887 8 9999999999999999999999999999854456889
Q ss_pred CHHHHHHhhcC--CceEEEEeCC-CCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCC--CCCcccc-CCCC
Q 014603 172 DLDAVEALADE--NTVALVIINP-GNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTP--FVPMGVF-GSIV 245 (422)
Q Consensus 172 d~~~l~~~~~~--~~~~i~i~~p-~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~--~~~~~~~-~~~~ 245 (422)
|++.+++.+++ ++++++++.| |||||.+++.+++++|+++|+++|++||+||+|..+.+++.. ..++..+ ...+
T Consensus 160 d~~~l~~~l~~~~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~~~~~~~ 239 (405)
T 3k7y_A 160 NYDLFLNDLRNIPNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFEEKNI 239 (405)
T ss_dssp CHHHHHHHHHHSCSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTTGGGHHHHHHHTTTC
T ss_pred CHHHHHHHHHhCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcccccCCCcccchHHHHHHHhcCC
Confidence 99999998753 4567777665 899999999999999999999999999999999998875421 1122222 2235
Q ss_pred CeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHH----hhh-hhccCcchHHHHHHHHHHhhch-----HHHH
Q 014603 246 PVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIK----SFL-NISSDPATFIQGAVPQILEKTE-----EEFF 315 (422)
Q Consensus 246 ~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~a~~~~l~~~~-----~~~~ 315 (422)
++++++||||+|+++|+|+||+++..+. +++++++. ... ...++++.+.|.++..+|.+.. ..++
T Consensus 240 ~~i~~~S~SK~~~l~GlRiG~~~~~~~~-----~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~l 314 (405)
T 3k7y_A 240 AFSVCQSFSKNMSLYGERAGALHIVCKN-----QEEKKIVFNNLCFIVRKFYSSPVIHTNRILCQLLNNQNLKLNWIKEL 314 (405)
T ss_dssp CEEEEEECTTTSCCTTTTEEEEEEECSS-----HHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred cEEEEeeCCccCCCccccceEEEEEeCC-----HHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 7999999999999999999999753211 44554443 222 2334667788989888887631 2345
Q ss_pred HHHHHHHHHHHHHHHHHhh----cCC---CCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCC
Q 014603 316 SKITDILRETADICCDRLK----EIP---CITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVG 388 (422)
Q Consensus 316 ~~~~~~~~~~~~~l~~~L~----~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~ 388 (422)
.+.+++++++++.+.+.|+ +++ ++. +..|.+|+|+|+.++. +++.++ +++||.+.||.
T Consensus 315 ~~~~~~~~~~R~~l~~~L~~~~~~~g~~~~~~-~~~p~gg~f~~~~l~~----------~~~~~L-~~~gV~v~p~~--- 379 (405)
T 3k7y_A 315 SQLSQRITNNRILFFNKLETYQKKYNLNYDWN-VYKKQRGLFSFVPLLA----------KIAEHL-KTHHIYIINNG--- 379 (405)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGGTCCCCGG-GGSSCCSSEEECGGGG----------GGTTTT-TTTTEECCTTS---
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCc-cccCCceEEEecCCCH----------HHHHHH-HHCCEeecCCC---
Confidence 6667789999999999999 762 256 4478999999987752 234556 78899999963
Q ss_pred CCCeEEEEec-cChHHHHHHHHHHHHHHHH
Q 014603 389 LKDWLRITFA-VEPSALEDGLGRMKAFYDR 417 (422)
Q Consensus 389 ~~~~iRis~~-~~~~~l~~~~~~l~~~~~~ 417 (422)
|||++ .+++++++++++|.+++++
T Consensus 380 -----Ris~a~~~~~~i~~~~~~i~~~~~~ 404 (405)
T 3k7y_A 380 -----RINVSGITKNNVDYIADKICLSLSQ 404 (405)
T ss_dssp -----EEEGGGCCTTHHHHHHHHHHHHHHC
T ss_pred -----eEEEeccCHHHHHHHHHHHHHHHhh
Confidence 99998 7899999999999998864
No 33
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=1.9e-46 Score=360.34 Aligned_cols=377 Identities=19% Similarity=0.257 Sum_probs=308.1
Q ss_pred ccHHHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCC--CCCCCCCCCCCHHHH
Q 014603 16 ANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSA--RFNCYSSTVGILPAR 93 (422)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~lr 93 (422)
+++++...+.+.++.+++.. .++++|||+.|.|+. ...+++.+.+++.+.+... ....|++..+.+++|
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~-------~~~~~idl~~g~~~~--~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr 91 (425)
T 1vp4_A 21 ISKIGQNMKSSIIREILKFA-------ADKDAISFGGGVPDP--ETFPRKELAEIAKEIIEKEYHYTLQYSTTEGDPVLK 91 (425)
T ss_dssp CCHHHHTCCCCCHHHHTTTT-------TSTTCEECCCCSCCG--GGSCHHHHHHHHHHHHHHSHHHHTSCCCTTCCHHHH
T ss_pred hhhhhhcCCCcHHHHHHHhc-------cCCCceeCCCCCCCc--ccCCHHHHHHHHHHHHhhcchhhcCCCCCCCCHHHH
Confidence 46678888888787766422 356899999998652 2346789999999888652 134788878899999
Q ss_pred HHHHHHHhhcCCCC-CCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccC
Q 014603 94 RAIADYLNRDLPYK-LSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVD 172 (422)
Q Consensus 94 ~~ia~~l~~~~~~~-~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d 172 (422)
+++++++.+.+|.. +++++|++|+|++++++.++++++++||+|+++.|+|+++...++..|.+++.++.+++ ++|
T Consensus 92 ~~la~~l~~~~g~~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~---~~d 168 (425)
T 1vp4_A 92 QQILKLLERMYGITGLDEDNLIFTVGSQQALDLIGKLFLDDESYCVLDDPAYLGAINAFRQYLANFVVVPLEDD---GMD 168 (425)
T ss_dssp HHHHHHHHHHHCCCSCCGGGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEEEEETT---EEC
T ss_pred HHHHHHHHhccCCCCCCcccEEEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEEeccCCC---CCC
Confidence 99999997665655 77899999999999999999999999999999999999999999999999999988642 389
Q ss_pred HHHHHHhhcC--------CceEE-EEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCC
Q 014603 173 LDAVEALADE--------NTVAL-VIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS 243 (422)
Q Consensus 173 ~~~l~~~~~~--------~~~~i-~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~ 243 (422)
++.|++.+++ +++++ ++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++....++..++.
T Consensus 169 ~~~l~~~l~~~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~ 248 (425)
T 1vp4_A 169 LNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGG 248 (425)
T ss_dssp HHHHHHHHHHHHHTTCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHHHC
T ss_pred HHHHHHHHHhhhhcccCCCceEEEECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHHhCC
Confidence 9999988765 67777 47899999999999999999999999999999999999998887665455555554
Q ss_pred CCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhh-hccCcchHHHHHHHHHHhhc-hHHHHHHHHHH
Q 014603 244 IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQGAVPQILEKT-EEEFFSKITDI 321 (422)
Q Consensus 244 ~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~ 321 (422)
.++++++.|+||.|+ +|+|+||++++ +++++.+..... .+.+++.+.|.++.++|+.. .+.++++.+++
T Consensus 249 ~~~~i~~~s~sK~~~-~G~r~G~~~~~--------~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~ 319 (425)
T 1vp4_A 249 PERVVLLNTFSKVLA-PGLRIGMVAGS--------KEFIRKIVQAKQSADLCSPAITHRLAARYLERYDLLEQLKPTIEL 319 (425)
T ss_dssp TTTEEEEEESTTTTC-GGGCEEEEECC--------HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHSCHHHHTHHHHHH
T ss_pred CCCEEEEeccccccc-cccceEEEeeC--------HHHHHHHHHHhhhhcCCCCHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 567899999999998 99999999986 467777776543 33467889999999999864 25678888999
Q ss_pred HHHHHHHHHHHhhcC-C---CCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC----CCeE
Q 014603 322 LRETADICCDRLKEI-P---CITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL----KDWL 393 (422)
Q Consensus 322 ~~~~~~~l~~~L~~~-~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~----~~~i 393 (422)
++++++.+.+.|++. | ++. +..|.+|+|+|+.++.. .+..++...+.++ ||.+.||..|+. .+++
T Consensus 320 ~~~~~~~l~~~L~~~~~~~~g~~-~~~~~~g~~~~~~~~~~-----~~~~~l~~~l~~~-gi~v~~g~~f~~~~~~~~~i 392 (425)
T 1vp4_A 320 YRRKRTVMLNALEEYFSDIPGVK-WVKSEGGLFIWLTLPEG-----FDTWEMFEYAKRK-KVFYVPGRVFKVYDEPSPSM 392 (425)
T ss_dssp HHHHHHHHHHHHHHHSTTSTTCE-ECCCSBSSEEEEECCTT-----CCTTTTHHHHHHH-TEECEEGGGGCTTCCCCSEE
T ss_pred HHHHHHHHHHHHHHhCCCCCceE-EecCCccEEEEEEcCCC-----CCHHHHHHHHHHC-CCEEECchhhcCCCCCCCeE
Confidence 999999999999874 5 566 44678899999998742 1345566777655 999999988753 5799
Q ss_pred EEEecc-ChHHHHHHHHHHHHHHHHhcc
Q 014603 394 RITFAV-EPSALEDGLGRMKAFYDRHAK 420 (422)
Q Consensus 394 Ris~~~-~~~~l~~~~~~l~~~~~~~~~ 420 (422)
||+++. +++++++++++|+++++++.+
T Consensus 393 Ris~~~~~~e~i~~~l~~l~~~l~~~~~ 420 (425)
T 1vp4_A 393 RLSFCLPPDEKIVEGIKRLREVVLEYGK 420 (425)
T ss_dssp EEECSSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 999995 789999999999999987654
No 34
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=100.00 E-value=1.4e-45 Score=350.58 Aligned_cols=352 Identities=20% Similarity=0.339 Sum_probs=300.7
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 122 (422)
.+.++|+|+.|++. ++++|.+.+++.+++.+. ...|++ +..++++.+++++.+.+|..+++++|++|+|++++
T Consensus 30 ~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~--~~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a 102 (391)
T 4dq6_A 30 GTNDLLPMWVADMD----FKAAPCIIDSLKNRLEQE-IYGYTT--RPDSYNESIVNWLYRRHNWKIKSEWLIYSPGVIPA 102 (391)
T ss_dssp SCSCSEECCSSSCS----SCCCHHHHHHHHHHHTTC-CCCCBC--CCHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHH
T ss_pred CCCCceeccccCCC----CCCCHHHHHHHHHHHhCC-CCCCCC--CCHHHHHHHHHHHHHHhCCCCcHHHeEEcCChHHH
Confidence 46889999999854 688899999999998753 335655 46899999999999887777889999999999999
Q ss_pred HHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeecc--CCCCcccCHHHHHHhhcCCceEEEEeCCCCCccccc
Q 014603 123 IEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLL--PAKGWEVDLDAVEALADENTVALVIINPGNPCGNVY 200 (422)
Q Consensus 123 ~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~ 200 (422)
++.++.+++++||+|+++.|+|+++...++..|.+++.++.+ .++++.+|++.+++.+++ ++++++++|+||||.++
T Consensus 103 ~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~v~i~~p~nptG~~~ 181 (391)
T 4dq6_A 103 ISLLINELTKANDKIMIQEPVYSPFNSVVKNNNRELIISPLQKLENGNYIMDYEDIENKIKD-VKLFILCNPHNPVGRVW 181 (391)
T ss_dssp HHHHHHHHSCTTCEEEECSSCCTHHHHHHHHTTCEEEECCCEECTTSCEECCHHHHHHHCTT-EEEEEEESSBTTTTBCC
T ss_pred HHHHHHHhCCCCCEEEEcCCCCHHHHHHHHHcCCeEEeeeeeecCCCceEeeHHHHHHHhhc-CCEEEEECCCCCCCcCc
Confidence 999999999999999999999999999999999999999987 345577999999999987 99999999999999999
Q ss_pred CHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCC--CCCeEEEecCccccCCCCceeEEEEeeCCCCcccc
Q 014603 201 TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS--IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQD 278 (422)
Q Consensus 201 ~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~--~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~ 278 (422)
|.+++++|+++|+++|+++|+||+|+.+.++|....++..+.. .++++++.|+||.++++|+|+||+++++
T Consensus 182 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~------- 254 (391)
T 4dq6_A 182 TKDELKKLGDICLKHNVKIISDEIHSDIILKKHKHIPMASISKEFEKNTITCMAPTKTFNIAGLQSSYVVLPD------- 254 (391)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEECSHHHHTCGGGCCEEEECCS-------
T ss_pred CHHHHHHHHHHHHHcCCEEEeeccccccccCCCCccCHHHcCccccCcEEEEEechhhccCcccceEEEEeCC-------
Confidence 9999999999999999999999999998888766666666654 3678999999999988999999999863
Q ss_pred hhHHHHHHhhhh--hccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCCCCCCCceEEEEec
Q 014603 279 SGIVDSIKSFLN--ISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKE-IPCITCPKKPEGSMFVMVKL 355 (422)
Q Consensus 279 ~~~~~~~~~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~g~~~~~~~ 355 (422)
+++.+.+..... ..++++.+.+.++.++++. .+.++++.+++++++++.+.+.|++ +|++. +..+.++++.|+.+
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~ 332 (391)
T 4dq6_A 255 EKDYKLLDDAFTRIDIKRNNCFSLVATEASYNN-GESWLESFLEYLESNIDFAIKYINENMPKLK-VRKPEGTYLLWVDF 332 (391)
T ss_dssp HHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCTTSE-ECCCSBSSEEEEEC
T ss_pred HHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHhc-hHHHHHHHHHHHHHHHHHHHHHHHhhCCCCE-ecCCCccEEEEEEh
Confidence 367777776643 2347788899998888875 3567888999999999999999998 78887 44788888888988
Q ss_pred CcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEeccChHHHHHHHHHHHHHH
Q 014603 356 NYSLLEGINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAVEPSALEDGLGRMKAFY 415 (422)
Q Consensus 356 ~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRis~~~~~~~l~~~~~~l~~~~ 415 (422)
+... .+..++...+.+++||.+.||..|+. .+++||+++++++++++++++|++++
T Consensus 333 ~~~~----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~~~~i~~~l~~l~~~l 390 (391)
T 4dq6_A 333 SALG----LSDEELESILVQKGKVALNQGNSFGIGGSGYQRINLACPRSMLEEALIRIKNAI 390 (391)
T ss_dssp GGGC----CCHHHHHHHHHHTTCEECEEGGGGCTTCTTEEEEECCSCHHHHHHHHHHHHHHH
T ss_pred hhcC----CCHHHHHHHHHHhCCEEeeCchhhCCCCCCeEEEEEcCCHHHHHHHHHHHHHHh
Confidence 7421 25677777776656999999988875 48999999999999999999999876
No 35
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=100.00 E-value=1.7e-46 Score=355.09 Aligned_cols=359 Identities=20% Similarity=0.296 Sum_probs=295.8
Q ss_pred ccCccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhh
Q 014603 23 ASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNR 102 (422)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~ 102 (422)
++++.++.+...+... . .++ ++|||+.|++. +++++.+.+++.+++. ....|++..+.+++|+++++++.+
T Consensus 4 ~~~~~~~~~~~~~~~~-~-~~g-~~i~l~~~~~~----~~~~~~v~~a~~~~~~--~~~~y~~~~g~~~lr~~la~~l~~ 74 (376)
T 3ezs_A 4 FEPYPFERLRALLKEI-T-PKK-RGLDLGIGEPQ----FETPKFIQDALKNHTH--SLNIYPKSAFEESLRAAQRGFFKR 74 (376)
T ss_dssp CCCCHHHHHHHHHTTC-C-CSS-CCCBCSSCCCC----SCCCHHHHHHHHTTGG--GGGSCCCTTCCHHHHHHHHHHHHH
T ss_pred CCcchHHHHHHHHHhh-h-ccC-CEEEeCCCCCC----CCCCHHHHHHHHHhhh--hcCCCCCCCCCHHHHHHHHHHHHH
Confidence 3455677777544432 2 235 89999999955 5678999999998873 345798888899999999999988
Q ss_pred cCCCCCCCCCEEEecCHHHHHHHHHHHhcCC--CCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhh
Q 014603 103 DLPYKLSPDDVYLTLGCTQAIEVILTVLARP--GANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALA 180 (422)
Q Consensus 103 ~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~--gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~ 180 (422)
.+|..+++++|++|+|++++++.++++++++ ||+|+++.|+|+++...++..|.+++.++.++.++ +++ .+++.+
T Consensus 75 ~~g~~~~~~~i~~t~g~~~al~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~-~l~~~~ 151 (376)
T 3ezs_A 75 RFKIELKENELISTLGSREVLFNFPSFVLFDYQNPTIAYPNPFYQIYEGAAKFIKAKSLLMPLTKEND--FTP-SLNEKE 151 (376)
T ss_dssp HHSCCCCGGGEEEESSSHHHHHHHHHHHTTTCSSCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGT--SCC-CCCHHH
T ss_pred HhCCCCCHHHEEECcCcHHHHHHHHHHHcCCCCCCEEEEecCCcHhHHHHHHHcCCEEEEcccCCCCC--cch-hHHhhh
Confidence 7777778899999999999999999999999 99999999999999999999999999999865444 333 555556
Q ss_pred cCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCcccc-C-----CCCCeEEEecCc
Q 014603 181 DENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF-G-----SIVPVLTLGSIS 254 (422)
Q Consensus 181 ~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~-~-----~~~~~i~i~s~s 254 (422)
.++++++++++|+||||.+++.+++++|+++|+++|+++|+||+|..+.+++... ++... + ..++++++.|+|
T Consensus 152 ~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~s~s 230 (376)
T 3ezs_A 152 LQEVDLVILNSPNNPTGRTLSLEELISWVKLALKHDFILINDECYSEIYENTPPP-SLLEACMLAGNEAFKNVLVIHSLS 230 (376)
T ss_dssp HHHCSEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBSSSCCC-CHHHHHHHTTCTTCTTEEEEEEST
T ss_pred ccCCCEEEEcCCCCCcCCCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCC-CHHHccccccccccCcEEEEecch
Confidence 5678899999999999999999999999999999999999999999988876332 22221 1 345789999999
Q ss_pred cccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhh-hccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHh
Q 014603 255 KRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRL 333 (422)
Q Consensus 255 K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L 333 (422)
|.++++|+|+||++++ +++++.+..... ...+++.+.+.++.++++. ..++++.+++++++++.+.+.|
T Consensus 231 K~~g~~G~r~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l 300 (376)
T 3ezs_A 231 KRSSAPGLRSGFIAGD--------SRLLEKYKAFRAYLGYTSANAIQKASEAAWLD--DRHAEFFRNIYANNLKLARKIF 300 (376)
T ss_dssp TTTTCGGGCCEEEEEC--------HHHHHHHHHHHTTTCCCCCHHHHHHHHHHHHC--SHHHHHHHHHHHHHHHHHHHHS
T ss_pred hccCCccceeEEEeeC--------HHHHHHHHHHHhhhcCCCChHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHh
Confidence 9998999999999985 578888877654 3457788999999999986 4568888999999999999998
Q ss_pred hcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCC----CCCeEEEEeccChHHHHHHHH
Q 014603 334 KEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVG----LKDWLRITFAVEPSALEDGLG 409 (422)
Q Consensus 334 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~----~~~~iRis~~~~~~~l~~~~~ 409 (422)
+ ++. .|.+++|+|+.++ +..++...+++++||.+.||..|+ ..+++||+++.++++++++++
T Consensus 301 ~---~~~---~~~~~~~~~~~~~--------~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~~~~~i~~~l~ 366 (376)
T 3ezs_A 301 K---NTL---IYPYSFYVYLPVQ--------NGENFAKTLYQNEGIITLPALYLGRNRIGADYVRLALVYDTPLLEKPLE 366 (376)
T ss_dssp T---TCC---CCSBSSEEEEECS--------CHHHHHHHHHHHHCCBCEEGGGGCSTTTTTTEEEEECCSCHHHHHHHHH
T ss_pred c---CCC---CCCcceEEEEECC--------CHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCeEEEEEcCCHHHHHHHHH
Confidence 7 343 6788999999886 366777777665799999999887 368999999889999999999
Q ss_pred HHHHHHHHh
Q 014603 410 RMKAFYDRH 418 (422)
Q Consensus 410 ~l~~~~~~~ 418 (422)
+|+++++++
T Consensus 367 ~l~~~l~~~ 375 (376)
T 3ezs_A 367 IIETYRENH 375 (376)
T ss_dssp HHHHHHCC-
T ss_pred HHHHHHHhc
Confidence 999988653
No 36
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=100.00 E-value=4.3e-46 Score=354.89 Aligned_cols=374 Identities=21% Similarity=0.316 Sum_probs=305.7
Q ss_pred cCccccHHHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCC--CCCCCCCCCCC
Q 014603 12 WGFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSA--RFNCYSSTVGI 89 (422)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~g~ 89 (422)
|...+++|+.....+.++.+++.. .++++|||+.|.++. ...+++.+.+++.+++... ....|++..+.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~i~l~~g~~~~--~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~~~ 76 (397)
T 2zyj_A 6 WSEAFGKGAGRIQASTIRELLKLT-------QRPGILSFAGGLPAP--ELFPKEEAAEAAARILREKGEVALQYSPTEGY 76 (397)
T ss_dssp HHHHSCGGGGGCCCCHHHHHHHHH-------TSTTCEEESSCCCCG--GGCCHHHHHHHHHHHHHHHHHHHTSCCCTTCC
T ss_pred HHHHhhhhhcccCchHHHHHHhhc-------cCCCceecCCCCCCc--hhCCHHHHHHHHHHHHHhcchhhhCCCCCCCC
Confidence 544478888888888788877643 356789999998652 2346789999998887642 13478877789
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCc
Q 014603 90 LPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGW 169 (422)
Q Consensus 90 ~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 169 (422)
.++|+++++++ ++++++|++|+|++++++.++++++++||+|+++.|+|+++...++..|.+++.++.+++
T Consensus 77 ~~l~~~la~~~------g~~~~~v~~~~g~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~--- 147 (397)
T 2zyj_A 77 APLRAFVAEWI------GVRPEEVLITTGSQQALDLVGKVFLDEGSPVLLEAPSYMGAIQAFRLQGPRFLTVPAGEE--- 147 (397)
T ss_dssp HHHHHHHHHHH------TSCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETT---
T ss_pred HHHHHHHHHHh------CCChhhEEEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEecCcCCC---
Confidence 99999999999 457789999999999999999999999999999999999999999999999999987542
Q ss_pred ccCHHHHHHhhcC-CceEE-EEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCC---
Q 014603 170 EVDLDAVEALADE-NTVAL-VIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSI--- 244 (422)
Q Consensus 170 ~~d~~~l~~~~~~-~~~~i-~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~--- 244 (422)
++|++.|++.+++ +++++ ++++|+||||.+++.+++++|+++|+++|+++|+||+|+.+.++|....++..++.+
T Consensus 148 ~~d~~~l~~~l~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~ 227 (397)
T 2zyj_A 148 GPDLDALEEVLKRERPRFLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGY 227 (397)
T ss_dssp EECHHHHHHHHHHCCCSCEEECCBSCTTTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCCCCCHHHHHHHHTC
T ss_pred CCCHHHHHHHHhhcCCeEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCCCCCchhhhCcccCC
Confidence 3899999998875 67777 578999999999999999999999999999999999999988876654555555544
Q ss_pred CCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhh-hccCcchHHHHHHHHHHhhchHHHHHHHHHHHH
Q 014603 245 VPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQGAVPQILEKTEEEFFSKITDILR 323 (422)
Q Consensus 245 ~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 323 (422)
++++++.|+||+++ +|+|+||++++ +++++.+..... ...+.+.+.+.++.++|+.....++++.+++++
T Consensus 228 ~~~i~~~s~sK~~~-~G~r~G~~~~~--------~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 298 (397)
T 2zyj_A 228 PGVIYLGSFSKVLS-PGLRVAFAVAH--------PEALQKLVQAKQGADLHTPMLNQMLVHELLKEGFSERLERVRRVYR 298 (397)
T ss_dssp CCEEEEEESTTTTC-GGGCCEEEECC--------HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHTTTHHHHHHHHHHHHH
T ss_pred CeEEEEeccccccc-ccceeEEEecC--------HHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 67899999999988 99999999986 467777776543 334568889999999998632256788889999
Q ss_pred HHHHHHHHHhhc-CC-CCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCC----CCCeEEEEe
Q 014603 324 ETADICCDRLKE-IP-CITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVG----LKDWLRITF 397 (422)
Q Consensus 324 ~~~~~l~~~L~~-~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~----~~~~iRis~ 397 (422)
++++.+.+.|++ +| ++. +..|.+|+++|+.++.. .+..++...+.++ ||.+.||..|+ ..+++||++
T Consensus 299 ~~~~~l~~~L~~~~~~g~~-~~~~~~g~~~~~~~~~~-----~~~~~~~~~l~~~-gi~v~~g~~f~~~~~~~~~iRis~ 371 (397)
T 2zyj_A 299 EKAQAMLHALDREVPKEVR-YTRPKGGMFVWMELPKG-----LSAEGLFRRALEE-NVAFVPGGPFFANGGGENTLRLSY 371 (397)
T ss_dssp HHHHHHHHHHHHHSCTTSE-ECCCSBSSEEEEECSTT-----CCHHHHHHHHHHT-TEEEEESGGGCTTSCCTTEEEEEC
T ss_pred HHHHHHHHHHHHHCCCCeE-EccCCccEEEEEEcCCC-----CCHHHHHHHHHHC-CCEEechHHhcCCCCCCCeEEEEc
Confidence 999999999987 57 576 44678889999998642 1466777777555 99999998875 357999999
Q ss_pred cc-ChHHHHHHHHHHHHHHHHhc
Q 014603 398 AV-EPSALEDGLGRMKAFYDRHA 419 (422)
Q Consensus 398 ~~-~~~~l~~~~~~l~~~~~~~~ 419 (422)
+. +++++++++++|+++++++.
T Consensus 372 ~~~~~~~i~~~~~~l~~~l~~~~ 394 (397)
T 2zyj_A 372 ATLDREGIAEGVRRLGRALKGLL 394 (397)
T ss_dssp SSSCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHH
Confidence 94 78999999999999998764
No 37
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=100.00 E-value=2.5e-45 Score=348.84 Aligned_cols=353 Identities=20% Similarity=0.308 Sum_probs=292.8
Q ss_pred CCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHH-HHHHHHHHHhhcCCCCCCCCCEEEecCHHHHH
Q 014603 45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILP-ARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI 123 (422)
Q Consensus 45 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~-lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~ 123 (422)
+++|||+.|++. +++++.+.+++.+++... ...|++. ..+ +|+++++++.+.+|.++++++|++|+|+++++
T Consensus 28 ~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~~lr~~la~~l~~~~g~~~~~~~v~~t~g~~~al 100 (390)
T 1d2f_A 28 ADLLPFTISDMD----FATAPCIIEALNQRLMHG-VFGYSRW--KNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMV 100 (390)
T ss_dssp --CEECCSSSCS----SCCCHHHHHHHHHHHTTC-CCCCCCS--CCHHHHHHHHHHHHHHSCCCCCGGGEEEESCHHHHH
T ss_pred CCeeEeeecCCC----CCCCHHHHHHHHHHHhCC-CCCCCCC--ChHHHHHHHHHHHHHhcCCCCCHHHEEEcCCHHHHH
Confidence 478999999854 578899999999988653 3477764 678 99999999988777778889999999999999
Q ss_pred HHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCC-CcccCHHHHHHhhcC-CceEEEEeCCCCCcccccC
Q 014603 124 EVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAK-GWEVDLDAVEALADE-NTVALVIINPGNPCGNVYT 201 (422)
Q Consensus 124 ~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~d~~~l~~~~~~-~~~~i~i~~p~nptG~~~~ 201 (422)
+.++++++++||+|+++.|+|+++...++..|.+++.++.++++ +|.+|++.|++.+++ +++++++++|+||||.++|
T Consensus 101 ~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG~~~~ 180 (390)
T 1d2f_A 101 SELIRQWSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWT 180 (390)
T ss_dssp HHHHHHSSCTTCEEEEEESCCHHHHHHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTSTTEEEEEEESSCTTTCCCCC
T ss_pred HHHHHHhcCCCCEEEEcCCCcHHHHHHHHHCCCEEEEeecccCCCccccCHHHHHHHhccCCCeEEEEeCCCCCCCcCcC
Confidence 99999999999999999999999999999999999999886543 467899999999876 7889999999999999999
Q ss_pred HHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhH
Q 014603 202 YQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGI 281 (422)
Q Consensus 202 ~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~ 281 (422)
.+++++|+++|+++|+++|+||+|+.+.++|....++..+..+-.-. +.|+||.++++|+|+||+++++ +++
T Consensus 181 ~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~-~~s~sK~~~~~G~r~G~~~~~~-------~~~ 252 (390)
T 1d2f_A 181 CDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWAL-LTSGSKSFNIPALTGAYGIIEN-------SSS 252 (390)
T ss_dssp TTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGTCCSSEEE-EECSHHHHTCGGGCCEEEEECS-------HHH
T ss_pred HHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcCHHHcchhhHhh-ccCccHhhcccChhheEEEECC-------HHH
Confidence 99999999999999999999999999888776555555554321013 9999999988999999999863 467
Q ss_pred HHHHHhhhh--hc-cCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCCCCCCCceEEEEecCc
Q 014603 282 VDSIKSFLN--IS-SDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKE-IPCITCPKKPEGSMFVMVKLNY 357 (422)
Q Consensus 282 ~~~~~~~~~--~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~g~~~~~~~~~ 357 (422)
.+.+..... .. ++++++.+.++.++++.. +.++++.+++++++++.+.+.|++ +|++. +..|.+++++|+.++.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~~~~~~~~ 330 (390)
T 1d2f_A 253 RDAYLSALKGRDGLSSPSVLALTAHIAAYQQG-APWLDALRIYLKDNLTYIADKMNAAFPELN-WQIPQSTYLAWLDLRP 330 (390)
T ss_dssp HHHHHHHHHTTSCCCSCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHCSSCC-CCCCSBCSEEEEECGG
T ss_pred HHHHHHHHhhhcccCCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHhhCCCCE-EecCCccEEEEEEccc
Confidence 777766554 22 377888888888888753 567888999999999999999998 78887 4467778888998864
Q ss_pred ccccCCCCHHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEeccChHHHHHHHHHHHHHHHHh
Q 014603 358 SLLEGINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAVEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 358 ~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRis~~~~~~~l~~~~~~l~~~~~~~ 418 (422)
.. .+..++...+++++||.+.||..|+. ++++||+++.+++++++++++|.++++++
T Consensus 331 ~~----~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~~l~~~ 389 (390)
T 1d2f_A 331 LN----IDDNALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAGCPRSKLEKGVAGLINAIRAV 389 (390)
T ss_dssp GC----CCHHHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHHHH
T ss_pred cC----CCHHHHHHHHHHHcCEEeeCccccCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHhh
Confidence 21 14667777776578999999988863 67999999988899999999999999875
No 38
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=100.00 E-value=9.4e-46 Score=350.65 Aligned_cols=364 Identities=26% Similarity=0.412 Sum_probs=295.5
Q ss_pred cccHHHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHH
Q 014603 15 KANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARR 94 (422)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~ 94 (422)
++++|+..++++.++.+..... .+++|||+.|.+. +++++.+.+++.+++.. .+.|++..+..++|+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~-------~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~--~~~y~~~~~~~~l~~ 68 (381)
T 1v2d_A 2 RLHPRTEAAKESIFPRMSGLAQ-------RLGAVNLGQGFPS----NPPPPFLLEAVRRALGR--QDQYAPPAGLPALRE 68 (381)
T ss_dssp CCCGGGGGC---CHHHHHHHHH-------HHTCEECCCCSCS----SCCCHHHHHHHHHHTTT--SCSCCCTTCCHHHHH
T ss_pred chhhhhhhcCccHHHHHHHHHh-------cCCeEEecCCCCC----CCCCHHHHHHHHHHHHH--hcCCCCCCCCHHHHH
Confidence 3567888888777777665332 1458999999865 56789999999998865 457888778999999
Q ss_pred HHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeecc--CCCCcccC
Q 014603 95 AIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLL--PAKGWEVD 172 (422)
Q Consensus 95 ~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~d 172 (422)
++++++ ++++++|++|+|++++++.++++++++||+|+++.|+|+++...++..|.+++.++.+ + +++.+|
T Consensus 69 ~la~~~------~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~~~~d 141 (381)
T 1v2d_A 69 ALAEEF------AVEPESVVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLPDAFLAGAKARLVRLDLTP-EGFRLD 141 (381)
T ss_dssp HHHHHH------TSCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEET-TEEECC
T ss_pred HHHHhc------CCChhhEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEeCCCCC-ccCCcC
Confidence 999998 5677899999999999999999999999999999999999999999999999999875 3 246789
Q ss_pred HHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEec
Q 014603 173 LDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGS 252 (422)
Q Consensus 173 ~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s 252 (422)
++.|++.++++++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+ |....++..+ ..+.++++.|
T Consensus 142 ~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~-g~~~~~~~~~-~~~~~~~~~s 219 (381)
T 1v2d_A 142 LSALEKALTPRTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYY-GERPRRLREF-APERTFTVGS 219 (381)
T ss_dssp HHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBS-SSCCCCHHHH-CTTTEEEEEE
T ss_pred HHHHHHhcCcCCEEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEEcCcccccc-CCCCCCHHHh-cCCCEEEEee
Confidence 9999999988899999999999999999999999999999999999999999998876 4333344433 3356799999
Q ss_pred CccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhh-hccCcchHHHHHHHHHHhhch-HHHHHHHHHHHHHHHHHHH
Q 014603 253 ISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQGAVPQILEKTE-EEFFSKITDILRETADICC 330 (422)
Q Consensus 253 ~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~ 330 (422)
+||.++++|+|+||++++ +++++.+..... ...+++.+.+.++.++|+... +.++++.+++++++++.+.
T Consensus 220 ~sK~~~~~G~r~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~ 291 (381)
T 1v2d_A 220 AGKRLEATGYRVGWIVGP--------KEFMPRLAGMRQWTSFSAPTPLQAGVAEALKLARREGFYEALREGYRRRRDLLA 291 (381)
T ss_dssp HHHHTTCGGGCCEEEECC--------TTTHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred chhhcCCcccceEEEEeC--------HHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHH
Confidence 999998899999999986 356676665543 345778888999888887532 4677888999999999999
Q ss_pred HHhhcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC----CCeEEEEeccChHHHHH
Q 014603 331 DRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL----KDWLRITFAVEPSALED 406 (422)
Q Consensus 331 ~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~----~~~iRis~~~~~~~l~~ 406 (422)
+.|++. ++. +..|.+++++|+.++.. + +..+++++||.+.||..|+. .+++||+++.+++++++
T Consensus 292 ~~L~~~-g~~-~~~~~~~~~~~~~~~~~------~----~~~~l~~~gi~v~~g~~~~~~~~~~~~iRi~~~~~~~~i~~ 359 (381)
T 1v2d_A 292 GGLRAM-GLR-VYVPEGTYFLMAELPGW------D----AFRLVEEARVALIPASAFYLEDPPKDLFRFAFCKTEEELHL 359 (381)
T ss_dssp HHHHHT-TCC-EECCSBSSEEEEECTTC------C----HHHHHHHTCEECEEGGGGCSSSCCTTEEEEECCSCHHHHHH
T ss_pred HHHHHC-CCE-ecCCCcceEEEEecChH------h----HHHHHHhCCEEEecchHhCCCCCCCCEEEEEeCCCHHHHHH
Confidence 999986 777 44677788999988641 2 45566788999999988764 67999999988999999
Q ss_pred HHHHHHHHHHHhcc
Q 014603 407 GLGRMKAFYDRHAK 420 (422)
Q Consensus 407 ~~~~l~~~~~~~~~ 420 (422)
++++|.+++++.++
T Consensus 360 ~~~~l~~~l~~~r~ 373 (381)
T 1v2d_A 360 ALERLGRVVNSPRE 373 (381)
T ss_dssp HHHHHHHHC-----
T ss_pred HHHHHHHHHhhccc
Confidence 99999999887654
No 39
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=100.00 E-value=2.3e-45 Score=353.72 Aligned_cols=383 Identities=19% Similarity=0.274 Sum_probs=300.4
Q ss_pred ccccHHHhhccCc-cHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhC----CCCCCCCCCCC
Q 014603 14 FKANEELKTASGI-TVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRS----ARFNCYSSTVG 88 (422)
Q Consensus 14 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~----~~~~~y~~~~g 88 (422)
..++.++..++.. ....+..+........++.++|+|++|++. ++.+|.+.+++.+++.. .....|++..+
T Consensus 24 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g 99 (432)
T 3ei9_A 24 VSRNSNMSKLQAGYLFPEIARRRSAHLLKYPDAQVISLGIGDTT----EPIPEVITSAMAKKAHELSTIEGYSGYGAEQG 99 (432)
T ss_dssp CCCCHHHHHCCSSCHHHHHHHHHHHHHHHCTTCCCEECSSCCCC----SCCCHHHHHHHHHHHHHTTSTTTCCCCCCTTC
T ss_pred cccChHHHhCCCCccHHHHHHHHHhhhhcCCCCCeEEccCCCCC----CCCCHHHHHHHHHHHhcccccCCccCCCCCCC
Confidence 4456678888775 555566555554444567789999999855 68899999999998873 23347888889
Q ss_pred CHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCC------------
Q 014603 89 ILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHL------------ 156 (422)
Q Consensus 89 ~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~------------ 156 (422)
.+++|+++++++.+ ++++++++|++|+|+++++..+ ..++++||.|+++.|+|+++...++..|.
T Consensus 100 ~~~l~~~ia~~~~~--~~~~~~~~i~~t~G~~~al~~l-~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~ 176 (432)
T 3ei9_A 100 AKPLRAAIAKTFYG--GLGIGDDDVFVSDGAKCDISRL-QVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYG 176 (432)
T ss_dssp CHHHHHHHHHHHHT--TTTCCGGGEEEESCHHHHHHHH-HHHHCTTCCEEEEESCCTHHHHHHHHHTCSCCEETTTTEET
T ss_pred CHHHHHHHHHHHHc--cCCCCcceEEECCChHHHHHHH-HHHcCCCCEEEEeCCCCHHHHHHHHHcCCcccccccccccC
Confidence 99999999999974 4567889999999999999974 77788999999999999999888877763
Q ss_pred eEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCC
Q 014603 157 EVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFV 236 (422)
Q Consensus 157 ~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~ 236 (422)
+++.+++++.+++..+++. .++++++++++|+||||.+++.+++++|+++|+++|++||+||+|+.+.+++.. .
T Consensus 177 ~~~~~~~~~~~~~~~~l~~-----~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~~-~ 250 (432)
T 3ei9_A 177 NIEYMRCTPENGFFPDLST-----VGRTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNP-R 250 (432)
T ss_dssp TCEEEECCGGGTTSCCGGG-----CCCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSCC-S
T ss_pred ceEEeccCcccCCcCChhh-----CCCCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCCC-C
Confidence 5777777654444455433 357889999999999999999999999999999999999999999998776543 2
Q ss_pred CccccC-CCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhh-hccCcchHHHHHHHHHHhhchHHH
Q 014603 237 PMGVFG-SIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQGAVPQILEKTEEEF 314 (422)
Q Consensus 237 ~~~~~~-~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~ 314 (422)
++..+. ..++++++.|+||+|+++|+|+||+++++.........+.+.+..... ..++++++.+.++.+++......+
T Consensus 251 ~~~~~~~~~~~~i~~~S~SK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~ 330 (432)
T 3ei9_A 251 SIFEIPGAEEVAMETASFSNYAGFTGVRLGWTVIPKKLLYSDGFPVAKDFNRIICTCFNGASNISQAGALACLTPEGLEA 330 (432)
T ss_dssp SGGGSTTGGGTEEEEEESHHHHCTTTTCCEEEECCTTCBCTTSCBHHHHHHHHHHHSCCCSCHHHHHHHHHHSSHHHHHH
T ss_pred ChhhcCCCCCeEEEEecchhccCCcccceEEEEEChHHhhcchHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcccHHH
Confidence 333332 235689999999999999999999998742100000112565655443 345678899999988887534567
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC--CCe
Q 014603 315 FSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL--KDW 392 (422)
Q Consensus 315 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~ 392 (422)
+++.+++++++++.+.+.|+++ ++. +..+.+++|+|+.++.. ++.+++..+++++||.+.||..|+. .++
T Consensus 331 ~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~~~------~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~ 402 (432)
T 3ei9_A 331 MHKVIGFYKENTNIIIDTFTSL-GYD-VYGGKNAPYVWVHFPNQ------SSWDVFAEILEKTHVVTTPGSGFGPGGEGF 402 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT-TCC-EEECSSSSEEEEECTTS------CHHHHHHHHHHHHCEECEEGGGGCGGGTTE
T ss_pred HHHHHHHHHHHHHHHHHHHHHC-Cce-ecCCCcceEEEEECCCC------CHHHHHHHHHHHCCEEEeCchHhCCCCCCE
Confidence 8899999999999999999988 777 43566788999999732 5777888888888999999998875 689
Q ss_pred EEEEeccChHHHHHHHHHHHHHHHH
Q 014603 393 LRITFAVEPSALEDGLGRMKAFYDR 417 (422)
Q Consensus 393 iRis~~~~~~~l~~~~~~l~~~~~~ 417 (422)
+|||+.+++++|++++++|++-.+.
T Consensus 403 iRis~~~~~e~l~~~l~rl~~~~~~ 427 (432)
T 3ei9_A 403 VRVSAFGHRENILEACRRFKQLYKH 427 (432)
T ss_dssp EEEECCSCHHHHHHHHHHHHHHHTT
T ss_pred EEEEecCCHHHHHHHHHHHHHHhhh
Confidence 9999999999999999999876543
No 40
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=100.00 E-value=8e-46 Score=355.63 Aligned_cols=353 Identities=18% Similarity=0.282 Sum_probs=302.2
Q ss_pred CCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHH
Q 014603 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI 123 (422)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~ 123 (422)
++++|+|+.|++. ++.+|.+.+++.+++... ...|++. ..++++++++++.+.+++.+++++|++|+|+++|+
T Consensus 60 g~~~i~~~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~l~~~l~~~l~~~~g~~~~~~~v~~~~g~~ea~ 132 (421)
T 3l8a_A 60 NPELLQMWVADMD----FLPVPEIKEAIINYGREH-IFGYNYF--NDDLYQAVIDWERKEHDYAVVKEDILFIDGVVPAI 132 (421)
T ss_dssp CTTCEECCSSCCC----SCCCHHHHHHHHHHHHHC-CSSCBCC--CHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHH
T ss_pred CCCeeecccCCCC----CCCCHHHHHHHHHHHhcC-CcCCCCC--CHHHHHHHHHHHHHHhCCCCCHHHEEEcCCHHHHH
Confidence 6889999999854 688999999999998753 3466654 38999999999998888778899999999999999
Q ss_pred HHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeecc-CCCCcccCHHHHHHhhc-CCceEEEEeCCCCCcccccC
Q 014603 124 EVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLL-PAKGWEVDLDAVEALAD-ENTVALVIINPGNPCGNVYT 201 (422)
Q Consensus 124 ~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~d~~~l~~~~~-~~~~~i~i~~p~nptG~~~~ 201 (422)
+.++++++++||+|+++.|+|+++...+...|.+++.+++. .++++.+|++.|++.++ ++++++++++|+||||.+++
T Consensus 133 ~~a~~~~~~~gd~Vi~~~~~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~vil~~p~nptG~~~~ 212 (421)
T 3l8a_A 133 SIALQAFSEKGDAVLINSPVYYPFARTIRLNDHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLCSPHNPGGRVWD 212 (421)
T ss_dssp HHHHHHHSCTEEEEEEEESCCHHHHHHHHHTTEEEEEEECEEETTEEECCHHHHHHHHHHTTEEEEEEESSBTTTTBCCC
T ss_pred HHHHHHhcCCCCEEEECCCCcHHHHHHHHHCCCEEEeccccccCCCeeeCHHHHHHHhhccCCeEEEECCCCCCCCCcCC
Confidence 99999999999999999999999999999999999999986 44557789999999987 78999999999999999999
Q ss_pred HHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCC--CCCeEEEecCccccCCCCceeEEEEeeCCCCcccch
Q 014603 202 YQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS--IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDS 279 (422)
Q Consensus 202 ~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~--~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~ 279 (422)
.+++++|+++|+++|+++|+||+|+.+.++|....++..+.. .++++++.|+||+++++|+|+||+++++ +
T Consensus 213 ~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~~~~~-------~ 285 (421)
T 3l8a_A 213 NDDLIKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQN-------E 285 (421)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEEECCS-------H
T ss_pred HHHHHHHHHHHHHcCCEEEEEccccccccCCCCCccHHHcCchhcCcEEEEEeChhhccCchhheEeEEcCC-------H
Confidence 999999999999999999999999999988876666666544 3678999999999988999999999864 4
Q ss_pred hHHHHHHhhhh--hccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCc
Q 014603 280 GIVDSIKSFLN--ISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNY 357 (422)
Q Consensus 280 ~~~~~~~~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~ 357 (422)
++.+.+..... .+++++++.+.++.++++. .+.++++..++++++++.+.+.|+++|++. ...+.++++.|+.++.
T Consensus 286 ~l~~~~~~~~~~~~~~~~n~~~~~a~~aal~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~-~~~~~~~~~~~v~~~~ 363 (421)
T 3l8a_A 286 SLRRKFQYRQLANNQHEVPTVGMIATQAAFQY-GKPWLEELKTVIEGNIKLVIKELEAKTKIK-VMEPEGTYLVWLDFSA 363 (421)
T ss_dssp HHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCSCE-EECCSBSSEEEEECGG
T ss_pred HHHHHHHHHHHhcccCCCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHhCCCce-EeCCCeeEEEEEeccc
Confidence 67777776552 2347888999999999875 367789999999999999999999877887 4478888888998865
Q ss_pred ccccCCCCHHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEeccChHHHHHHHHHHHHHHH
Q 014603 358 SLLEGINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAVEPSALEDGLGRMKAFYD 416 (422)
Q Consensus 358 ~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRis~~~~~~~l~~~~~~l~~~~~ 416 (422)
.. .+..++...+++++||.+.+|..|+. .+++||++++++++|++++++|+++++
T Consensus 364 ~~----~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~i~~~l~~l~~~l~ 420 (421)
T 3l8a_A 364 YA----IAQPQLSEKLQNEAKVVLNDGAHFGKEGKYFARLNVATPKNTVQEALSRIISVFG 420 (421)
T ss_dssp GT----CCTTHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHC-
T ss_pred cC----CCHHHHHHHHHHhCCEEEECchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHHh
Confidence 21 14566777776778999999988875 689999999999999999999998874
No 41
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=100.00 E-value=2.2e-45 Score=354.46 Aligned_cols=372 Identities=17% Similarity=0.190 Sum_probs=307.6
Q ss_pred hccCccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHh
Q 014603 22 TASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLN 101 (422)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~ 101 (422)
....+.++.++....... ..+++++|+|+.|.+. +++++.+.+++.+.+.......|++..+.+++|++++++++
T Consensus 22 ~~~~~~~~~~~~~~~~~~-~~~g~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~ 96 (437)
T 3g0t_A 22 DLGMASIRDLVALVTNLE-KATGTKFCRMEMGVPG----LPAPQIGIETEIQKLREGVASIYPNLDGLPELKQEASRFAK 96 (437)
T ss_dssp CGGGCCHHHHHHHHHHHH-HHHTCCCEECCCCSCC----SCCCHHHHHHHHHHHHHTGGGSCCCTTCCHHHHHHHHHHHH
T ss_pred cCCCcHHHHHHHHHHHHH-HhcCCCEEeccCcCCC----CCCCHHHHHHHHHHHhCCcCcCCCCCCChHHHHHHHHHHHH
Confidence 355677888887655432 2247889999999965 57889999999998875443689888889999999999999
Q ss_pred hcCCCCCCCCCEEEecCHHHHHHHHHHHhc--CCCC--EEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHH
Q 014603 102 RDLPYKLSPDDVYLTLGCTQAIEVILTVLA--RPGA--NILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVE 177 (422)
Q Consensus 102 ~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~--~~gd--~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~ 177 (422)
+.+|..+++++|++|+|++++++.++.+++ ++|| +|+++.|+|+++...++..|.+++.++++ .+++.+|++.|+
T Consensus 97 ~~~g~~~~~~~i~~t~g~t~al~~~~~~l~~~~~gd~~~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~-~~~~~~d~~~l~ 175 (437)
T 3g0t_A 97 LFVNIDIPARACVPTVGSMQGCFVSFLVANRTHKNREYGTLFIDPGFNLNKLQCRILGQKFESFDLF-EYRGEKLREKLE 175 (437)
T ss_dssp HHHCCCCCGGGEEEESHHHHHHHHHHHHHTTSCTTCSCCEEEEESCCHHHHHHHHHHTCCCEEEEGG-GGCTTHHHHHHH
T ss_pred HhhCCCCCcccEEEeCCHHHHHHHHHHHHhcCCCCCccEEEEeCCCcHhHHHHHHHcCCEEEEEeec-CCCCccCHHHHH
Confidence 887878889999999999999999999998 9999 99999999999999999999999999986 456678999999
Q ss_pred Hhh-cCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCC----Cc-cccCC-CCCeEEE
Q 014603 178 ALA-DENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFV----PM-GVFGS-IVPVLTL 250 (422)
Q Consensus 178 ~~~-~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~----~~-~~~~~-~~~~i~i 250 (422)
+.+ +++++++++++|+||||.+++.+++++|+++|+++|+++|+|++|+.+.+++.... ++ ..+.. .++++++
T Consensus 176 ~~l~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 255 (437)
T 3g0t_A 176 SYLQTGQFCSIIYSNPNNPTWQCMTDEELRIIGELATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVANYTDNYILA 255 (437)
T ss_dssp HHHTTTCCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTSCCCSTTSSCCCCCGGGTCSCEEEE
T ss_pred HHHhcCCceEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchhhcccCCCcCcccccchhhccCCCCCcEEEE
Confidence 998 67899999999999999999999999999999999999999999998877643211 11 33332 4678999
Q ss_pred ecCccccCCCCceeEEEEeeCCCCcccchhHHH-H-----------------HHhhhh-hccCcchHHHHHHHHHHhhch
Q 014603 251 GSISKRWIVPGWRLGWLVTSDPNGILQDSGIVD-S-----------------IKSFLN-ISSDPATFIQGAVPQILEKTE 311 (422)
Q Consensus 251 ~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~-~-----------------~~~~~~-~~~~~~~~~~~a~~~~l~~~~ 311 (422)
.|+||.++++|+|+||++++ +++++ . +..... ...+++.+.+.++.++|+..
T Consensus 256 ~s~sK~~~~~G~r~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~- 326 (437)
T 3g0t_A 256 LSSSKAFSYAGQRIGVLMIS--------GKLYEREYPDLEESFGRLRFGEALSSSALYALSSGATHSAQWGMAAMLKAC- 326 (437)
T ss_dssp EESTTTTSCGGGCCEEEEEC--------HHHHHCBCGGGHHHHSCSBHHHHHHTTHHHHHHSSSCHHHHHHHHHHHHHH-
T ss_pred EcCccCCCCccceeEEEEEC--------HHHhhhhhhcccccccccchhHHHHHHHHhhhcCCCCHHHHHHHHHHHhCc-
Confidence 99999998899999999986 45666 5 554443 34578889999999999762
Q ss_pred HHH---HHHHHHHHHHHHHHHHHHhhcCCCCCCCC------CC-CCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEE
Q 014603 312 EEF---FSKITDILRETADICCDRLKEIPCITCPK------KP-EGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIV 381 (422)
Q Consensus 312 ~~~---~~~~~~~~~~~~~~l~~~L~~~~~~~~~~------~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v 381 (422)
+.+ +++.+++++++++.+.+.|+++ ++. +. .| .+++++|+.++. .+..++...+. ++||.+
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~~~~~~~~~------~~~~~l~~~L~-~~gi~v 397 (437)
T 3g0t_A 327 NDGEYNFRDSVIEYGRKARIMKKMFLDN-GFN-IVYDKDGNEPLADGFYFTVGYKG------MDSSKLIEKFV-RYGMCA 397 (437)
T ss_dssp HTTSCCHHHHHHHHHHHHHHHHHHHHTT-TEE-ESSCEETTEECCSSSEEEEEETT------CCHHHHHHHHH-HTTEEC
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHc-CCE-EeccccCCCCCceeEEEEEecCC------CCHHHHHHHHH-HcCeEE
Confidence 223 7888999999999999999998 776 43 24 788999998872 25677777775 459999
Q ss_pred ecCCCCCCC--CeEEEEec-cChHHHHHHHHHHHHHHHH
Q 014603 382 LPGITVGLK--DWLRITFA-VEPSALEDGLGRMKAFYDR 417 (422)
Q Consensus 382 ~~g~~~~~~--~~iRis~~-~~~~~l~~~~~~l~~~~~~ 417 (422)
.|+..|+.. +++|||++ .+++++++++++|++++++
T Consensus 398 ~~~~~~~~~~~~~iRis~~~~~~e~i~~~~~~l~~~~~~ 436 (437)
T 3g0t_A 398 ITLKTTGSKRNEAMRICTSLLPESQFPDLEKRLQMLNAE 436 (437)
T ss_dssp EESTTTTCCCTTCEEEECSSSCGGGHHHHHHHHHHHHHH
T ss_pred eeccccCCCCCCEEEEEEecCCHHHHHHHHHHHHHHHhc
Confidence 999888763 78999999 5899999999999998754
No 42
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.1e-45 Score=360.53 Aligned_cols=369 Identities=23% Similarity=0.359 Sum_probs=286.5
Q ss_pred CceeecCCCCCCCCCCC---------------------CcHHHHHHHHHHhhCC---CCCCCCCCCCCHHHHHHHHHHHh
Q 014603 46 PLIPLGHGDPSAFPSFR---------------------TASVAVDAIVHSVRSA---RFNCYSSTVGILPARRAIADYLN 101 (422)
Q Consensus 46 ~~i~l~~g~~~~~~~~~---------------------~~~~v~~a~~~~~~~~---~~~~y~~~~g~~~lr~~ia~~l~ 101 (422)
.+|++++|+|......+ .|..+.+++.+.+... ....|++..|.+++|+++++++.
T Consensus 64 ~~i~~nig~p~~~~~~~~~~~r~~l~l~~~p~~~~~~~~P~~~~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~ 143 (498)
T 3ihj_A 64 EVIRANIGDAQAMGQQPITFLRQVMALCTYPNLLDSPSFPEDAKKRARRILQACGGNSLGSYSASQGVNCIREDVAAYIT 143 (498)
T ss_dssp SCBCCC----------CCHHHHHHHHHHHCGGGGGCSSSCHHHHHHHHHHHHHC----------CCSCHHHHHHHHHHHH
T ss_pred hhhhcCCcCcccccCCcchHHHHHHHHhcCccccCcccCCHHHHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 78999999985422111 1445556656666542 34689999999999999999999
Q ss_pred hcC-CCCCCCCCEEEecCHHHHHHHHHHHhcCCCC----EEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHH
Q 014603 102 RDL-PYKLSPDDVYLTLGCTQAIEVILTVLARPGA----NILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAV 176 (422)
Q Consensus 102 ~~~-~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd----~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l 176 (422)
+.. |+.+++++|++|+|+++++..++++++++|| .|+++.|+|+.+...+...|.+++.++++++++|.+|++.|
T Consensus 144 ~~~gG~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~~~d~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l 223 (498)
T 3ihj_A 144 RRDGGVPADPDNIYLTTGASDGISTILKILVSGGGKSRTGVMIPIPQYPLYSAVISELDAIQVNYYLDEENCWALNVNEL 223 (498)
T ss_dssp HHTTTCCCCGGGEEEESSHHHHHHHHHHHHCCCCGGGSEEEEEEESCCTHHHHHHHHTTCEEEEEECBGGGTTBCCHHHH
T ss_pred HhcCCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCCCCEEEEeCCCchhHHHHHHHcCCEEEEeeccccccCCCCHHHH
Confidence 877 4788899999999999999999999998875 99999999999999999999999999998777899999999
Q ss_pred HHhhcC-----CceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCC-CCCCccccC--------
Q 014603 177 EALADE-----NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNT-PFVPMGVFG-------- 242 (422)
Q Consensus 177 ~~~~~~-----~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~-~~~~~~~~~-------- 242 (422)
++.+++ +++++++++|+||||.+++.+++++|+++|+++|++||+||+|..+.|++. ...++..+.
T Consensus 224 e~~l~~~~~~~~~k~i~l~np~NPTG~v~s~~~l~~i~~la~~~~~~li~De~y~~~~~~~~~~~~s~~~~~~~~~~~~~ 303 (498)
T 3ihj_A 224 RRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYS 303 (498)
T ss_dssp HHHHHHHTTTSEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTCHHHH
T ss_pred HHHHHhhhccCCCeEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCcEEEEEcCccccccCCCCCcCCHHHHHHHhccccc
Confidence 998865 589999999999999999999999999999999999999999999888753 344443321
Q ss_pred CCCCeEEEecCcccc-CCCCceeEEEEeeCCCCcccchhHHHHHHhhhhhccCcchHHHHHHHHHHhh------chH---
Q 014603 243 SIVPVLTLGSISKRW-IVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQGAVPQILEK------TEE--- 312 (422)
Q Consensus 243 ~~~~~i~i~s~sK~~-~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~------~~~--- 312 (422)
.+.++++++|+||.| |.+|+|+||++.... .+++++.+........+++.+.|.++..+++. .-+
T Consensus 304 ~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~-----~~~l~~~l~~~~~~~~~~~~~~q~a~~~~l~~~~~g~~~~~~~~ 378 (498)
T 3ihj_A 304 SNVELASFHSTSKGYMGECGYRGGYMEVINL-----HPEIKGQLVKLLSVRLCPPVSGQAAMDIVVNPPVAGEESFEQFS 378 (498)
T ss_dssp TTCCEEEEEESSSSTTCCSSSCCEEEEEESC-----CHHHHHHHHHHHHHSCCCCHHHHHHHHHHTCCCCTTSTTHHHHH
T ss_pred CceeEEEEeccccccccCcccceEEEEEecC-----CHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCCccCcccHHHHH
Confidence 123479999999999 679999999984211 15788888777666667888999998888863 112
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccc-------cCCCCHHHH-HHHHHHhcCeEEecC
Q 014603 313 EFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLL-------EGINSDMEF-ALKLAKEESVIVLPG 384 (422)
Q Consensus 313 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~-------~~~~~~~~~-~~~l~~~~gi~v~~g 384 (422)
....+.+++++++++.+.+.|+++|++. +..|.+++|+|++++.+.. .+. +..++ +..+++++||.+.||
T Consensus 379 ~~~~~~~~~l~~~~~~l~~~L~~~~g~~-~~~p~gg~~~~~~l~~p~~~~~~~~~~g~-~~~~~~~~~ll~~~gI~v~pG 456 (498)
T 3ihj_A 379 REKESVLGNLAKKAKLTEDLFNQVPGIH-CNPLQGAMYAFPRIFIPAKAVEAAQAHQM-APDMFYCMKLLEETGICVVPG 456 (498)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSTTEE-CCCCCBSSEECCEECCCHHHHHHHHHTTS-CHHHHHHHHHHHHHCBCCEEG
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCcE-ecCCCeEEEEEEeccCchhhhHHHHhcCC-CcHHHHHHHHHHHCCEEEEeC
Confidence 2345677889999999999999998988 4588999999977642100 011 33443 567778889999999
Q ss_pred CCCCC---CCeEEEEeccChHHHHHHHHHHHHHHHHhccc
Q 014603 385 ITVGL---KDWLRITFAVEPSALEDGLGRMKAFYDRHAKK 421 (422)
Q Consensus 385 ~~~~~---~~~iRis~~~~~~~l~~~~~~l~~~~~~~~~~ 421 (422)
..|+. .+++|++++.+++++++++++|.++++++.++
T Consensus 457 ~~f~~~~~~~~~Ris~~~~~e~l~~~i~~L~~~~~~~~~~ 496 (498)
T 3ihj_A 457 SGFGQREGTYHFRMTILPPVEKLKTVLQKVKDFHINFLEK 496 (498)
T ss_dssp GGTCCCTTCCBEEEECCSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99975 45999999988999999999999999888653
No 43
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=100.00 E-value=7.2e-46 Score=355.81 Aligned_cols=372 Identities=18% Similarity=0.184 Sum_probs=296.5
Q ss_pred ccccHHHhhccCccHHHHHHHHHhhhhccCCCCceeecCC---CCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCH
Q 014603 14 FKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHG---DPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGIL 90 (422)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g---~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~ 90 (422)
+++++++...+++.++.+...+.+. ..+++|||+.| ++. ...++++.+.+++.+.+.......|++..|.+
T Consensus 22 ~~~~~~~~~~~~~~i~~~~~~~~~~----~~~~~i~l~~G~y~d~~--~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~ 95 (420)
T 4f4e_A 22 MSLFSAVELAPRDPILGLNEAFNAD----TRPTKVNLGVGVYTNED--GKIPLLRAVRDAEKARVEAGLPRGYLPIDGIA 95 (420)
T ss_dssp CCTTTTCCCCCCCHHHHHHHHHHHC----CCSSCEECCCCSCCCTT--SCCCCCHHHHHHHHHHHHTCCCCCCCCTTCCH
T ss_pred cCHhhcCCcCCCChHHHHHHHHHhc----CCCCcEEeeeeeeECCC--CCccCcHHHHHHHHHHhccCCCCCCCCCCCcH
Confidence 5567899999999999999877654 35689999999 444 22345699999999998875556899889999
Q ss_pred HHHHHHHHHHhhcCCCCCCCC--CEEEecCHHHHHHHHH--HHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCC
Q 014603 91 PARRAIADYLNRDLPYKLSPD--DVYLTLGCTQAIEVIL--TVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPA 166 (422)
Q Consensus 91 ~lr~~ia~~l~~~~~~~~~~~--~i~~~~g~~~a~~~~~--~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 166 (422)
++|+++++++....+..++++ +|++|+|+++|++.++ .+++++||+|++++|+|.++...++..|.+++.++..+.
T Consensus 96 ~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~t~al~~~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~ 175 (420)
T 4f4e_A 96 AYDASVQKLLLGDDSPLIAAGRVVTAQALGGTGALKIGADFLRTLNPKAKVAISDPSWENHRALFDMAGFEVVAYPYYDA 175 (420)
T ss_dssp HHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHTTCCEEEEECEET
T ss_pred HHHHHHHHHhcCCCccccccCceEEEECCccHHHHHHHHHHHHHhCCCCEEEEeCCCcHhHHHHHHHcCCeEEEeeeecc
Confidence 999999999976443333677 8999999999999995 456789999999999999999999999999999998444
Q ss_pred CCcccCHHHHHHhhc---CCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCC-CCCCcccc-
Q 014603 167 KGWEVDLDAVEALAD---ENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNT-PFVPMGVF- 241 (422)
Q Consensus 167 ~~~~~d~~~l~~~~~---~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~-~~~~~~~~- 241 (422)
+++.+|++.+++.++ ++++++++++|+||||.+++.+++++|+++|+++|+++|+||+|..+.+++. ...++..+
T Consensus 176 ~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~ 255 (420)
T 4f4e_A 176 KTNGVNFDGMLAALNGYEPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAAAVRLFA 255 (420)
T ss_dssp TTTEECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGHHHHHHH
T ss_pred ccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhHHHHHHH
Confidence 567899999999887 5778899999999999999999999999999999999999999999887642 12222222
Q ss_pred CCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHH----HHhhh-hhccCcchHHHHHHHHHHhhch-----
Q 014603 242 GSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDS----IKSFL-NISSDPATFIQGAVPQILEKTE----- 311 (422)
Q Consensus 242 ~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~a~~~~l~~~~----- 311 (422)
+..++++++.|+||.|+++|+|+||+++..+. +++++. ++... ..+.+++.+.+.++..++....
T Consensus 256 ~~~~~~i~~~S~SK~~~~~G~RiG~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~ 330 (420)
T 4f4e_A 256 AANLNVFVSSSFSKSFSLYGERVGALSIITDS-----KDEAARVLSQLKRVIRTNYSNPPTHGGAIVAAVLASPELRASW 330 (420)
T ss_dssp HTTCCEEEEEECTTTTTCGGGCEEEEEEECSS-----HHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHCHHHHHHH
T ss_pred hcCCCEEEEEeCCccCcCcCCCcEEEEEEcCC-----HHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHhcCHHHHHHH
Confidence 23457899999999999999999999753211 344433 33222 2344677888888888887632
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcC---CCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCC
Q 014603 312 EEFFSKITDILRETADICCDRLKEI---PCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVG 388 (422)
Q Consensus 312 ~~~~~~~~~~~~~~~~~l~~~L~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~ 388 (422)
+.++++.+++++++++.+.+.|+++ +++. +..|.+|+|+|+.++ . +.+..+++++||.+.|+.
T Consensus 331 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~g~~~~~~~~---------~-~~~~~~l~~~gI~v~~~~--- 396 (420)
T 4f4e_A 331 VQELGEMRDRIRAMRNGLVERLKAAGIERDFS-FINAQRGMFSYSGLT---------S-AQVDRLREEFGIYAVSTG--- 396 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCT-HHHHSCSSEEECCCC---------H-HHHHHHHHHHCEECCTTS---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCce-eECCCccEEEEeCCC---------H-HHHHHHHHhCCEEecCCC---
Confidence 4567888999999999999999987 3666 446788999997663 3 345566678899999863
Q ss_pred CCCeEEEEec-cChHHHHHHHHHHHHHH
Q 014603 389 LKDWLRITFA-VEPSALEDGLGRMKAFY 415 (422)
Q Consensus 389 ~~~~iRis~~-~~~~~l~~~~~~l~~~~ 415 (422)
|+|++ .+++++++++++|++++
T Consensus 397 -----Ris~~~~~~~~i~~~~~~l~~~l 419 (420)
T 4f4e_A 397 -----RICVAALNTRNLDVVANAIAAVL 419 (420)
T ss_dssp -----EEEGGGCCTTTHHHHHHHHHHHH
T ss_pred -----eEEEecCCHHHHHHHHHHHHHHh
Confidence 99998 48888999999999876
No 44
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=100.00 E-value=2.2e-44 Score=339.03 Aligned_cols=333 Identities=19% Similarity=0.260 Sum_probs=282.4
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 122 (422)
+..++|+|+.|.+. +++++.+.+++.+.+.. ...|+ ..+..++|+++++++ ++++++|++|+|++++
T Consensus 30 ~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~--~~~y~-~~~~~~lr~~la~~~------~~~~~~v~~~~g~t~a 96 (363)
T 3ffh_A 30 GLTKITKLSSNENP----LGTSKKVAAIQANSSVE--TEIYP-DGWASSLRKEVADFY------QLEEEELIFTAGVDEL 96 (363)
T ss_dssp TCSCCEECSSCSCT----TCCCHHHHHHHHTCBSC--CCBC-----CHHHHHHHHHHH------TCCGGGEEEESSHHHH
T ss_pred CCCceEEccCCCCC----CCCCHHHHHHHHHHHHH--hhcCC-CcchHHHHHHHHHHh------CCChhhEEEeCCHHHH
Confidence 45789999999854 67889999999987643 44665 467899999999999 4678899999999999
Q ss_pred HHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCH
Q 014603 123 IEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTY 202 (422)
Q Consensus 123 ~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~ 202 (422)
++.++++++++||+|+++.|+|+++...++..|.+++.++.++ ++.+|++.+++.++++++++++++|+||||.+++.
T Consensus 97 ~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~~ 174 (363)
T 3ffh_A 97 IELLTRVLLDTTTNTVMATPTFVQYRQNALIEGAEVREIPLLQ--DGEHDLEGMLNAIDEKTTIVWICNPNNPTGNYIEL 174 (363)
T ss_dssp HHHHHHHHCSTTCEEEEEESSCHHHHHHHHHHTCEEEEEECCT--TSCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCH
T ss_pred HHHHHHHHccCCCEEEEcCCChHHHHHHHHHcCCEEEEecCCC--CCCcCHHHHHHhcccCCCEEEEeCCCCCcCCCcCH
Confidence 9999999999999999999999999999999999999999864 46799999999998899999999999999999999
Q ss_pred HHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHH
Q 014603 203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIV 282 (422)
Q Consensus 203 ~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 282 (422)
+++.+|++.|++ |+++|+|++|+.+.+ +.....+......++++++.|+||.++++|+|+||++++ +++.
T Consensus 175 ~~l~~l~~~~~~-~~~li~De~~~~~~~-~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~--------~~~~ 244 (363)
T 3ffh_A 175 ADIQAFLDRVPS-DVLVVLDEAYIEYVT-PQPEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIAD--------KEII 244 (363)
T ss_dssp HHHHHHHTTSCT-TSEEEEECTTGGGCS-SCCCCCGGGGGTCTTEEEEEESSSTTCCSSCCCEEEEEC--------HHHH
T ss_pred HHHHHHHHhCCC-CcEEEEeCchHhhcC-ccccCHHHHhhcCCCEEEEeechhhhcCchhceeeeecC--------HHHH
Confidence 999999998888 999999999998777 543334444445668899999999998899999999985 5788
Q ss_pred HHHHhhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccccC
Q 014603 283 DSIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEG 362 (422)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 362 (422)
+.+..... ..+++.+.+.++.++|+. ..++++.+++++++++.+.+.|++++++. + .+..+.|+|+.++.
T Consensus 245 ~~l~~~~~-~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~~g~~-~-~~~~~~~~~~~~~~----- 314 (363)
T 3ffh_A 245 RQLNIVRP-PFNTTSIGQKLAIEAIKD--QAFIGECRTSNANGIKQYEAFAKRFEKVK-L-YPANGNFVLIDLGI----- 314 (363)
T ss_dssp HHHHHTCC-SCCCBHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHHHHHHHHHCTTCE-E-CCCCSSEEEEECSS-----
T ss_pred HHHHHhCC-CCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHhhCCCce-E-CCCCCeEEEEECCC-----
Confidence 88877654 357888999999999975 47788999999999999999999966877 4 35557788998863
Q ss_pred CCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEeccChHHHHHHHHHHHHH
Q 014603 363 INSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALEDGLGRMKAF 414 (422)
Q Consensus 363 ~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~l~~~~~~l~~~ 414 (422)
+..++...+. ++||.+.+|..|+.++++||+++ +++++++++++|+++
T Consensus 315 --~~~~~~~~l~-~~gi~v~~g~~~~~~~~iRis~~-~~~~i~~~~~~l~~~ 362 (363)
T 3ffh_A 315 --EAGTIFSYLE-KNGYITRSGAALGFPTAVRITIG-KEEDNSAVIALLEKL 362 (363)
T ss_dssp --CHHHHHHHHH-HTTEECEETTTTTCTTEEEEECC-CHHHHHHHHHHHHHH
T ss_pred --CHHHHHHHHH-HCCeEEEeCccCCCCCeEEEECC-CHHHHHHHHHHHHHh
Confidence 4667777665 56999999999988999999998 788999999999875
No 45
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=100.00 E-value=1.3e-44 Score=346.94 Aligned_cols=385 Identities=14% Similarity=0.120 Sum_probs=299.8
Q ss_pred cCccccHHHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCC-CCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCH
Q 014603 12 WGFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSA-FPSFRTASVAVDAIVHSVRSARFNCYSSTVGIL 90 (422)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~-~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~ 90 (422)
|.+..+++.....++.+..+...+.+...+..+.++|+|+.|.|.+ .+.+++++.+.+++.+.... ....|.+..|.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~~~y~~~~g~~ 83 (418)
T 3rq1_A 5 TSVAAKHAKGKKLKDVIFVTAGQAQADAKENGRENVVNGTLGAIHDEEGNLVFLKTVKEEYLSLSDS-EHVGYAPIAGIP 83 (418)
T ss_dssp CCCSCTTTTTCCCCCHHHHHHHHHHHHHHHHCGGGCEECCSSCCBCTTSCBCCCHHHHHHHHTCCHH-HHHSCCCTTCCH
T ss_pred hhhhHhhcCCCCCCchHHHHHHHHHhhhhhhcCCCeEECCCCcccCCCCCccccHHHHHHHHHhccc-ccCCCCCCCChH
Confidence 3444455566667778888887777665555677899999998732 23467888998888765432 234788888999
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcc
Q 014603 91 PARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWE 170 (422)
Q Consensus 91 ~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 170 (422)
++|+++++++....+.. .+++|++|+|+++++..++++++++||+|+++.|+|.++...++..|.+++.+++.+++ +.
T Consensus 84 ~lr~~ia~~~~~~~~~~-~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~-~~ 161 (418)
T 3rq1_A 84 DFLCAAEKECFGNFRPE-GHIRSIATAGGTGGIHHLIHNYTEPGDEVLTADWYWGAYRVICSDTGRTLVTYSLFDEH-NN 161 (418)
T ss_dssp HHHHHHHHHHHGGGCCS-SEEEEEEESHHHHHHHHHHHHHSCTTCEEEEESSCCTHHHHHHHHTTCEEEEECSBCTT-SS
T ss_pred HHHHHHHHHHhcccCcc-ccccEEECCchHHHHHHHHHHhcCCCCEEEECCCCchhHHHHHHHcCCEEEEEeeeCCC-CC
Confidence 99999999997643311 12399999999999999999999999999999999999999999999999999986543 67
Q ss_pred cCHHHHHHhhcC----Cce-EEEEeCC-CCCcccccCHHHHHHHHHHHH------HcCcEEEEcccccccccCCCCCCCc
Q 014603 171 VDLDAVEALADE----NTV-ALVIINP-GNPCGNVYTYQHLQKIAETAK------KLGIMVIADEVYDHLAFGNTPFVPM 238 (422)
Q Consensus 171 ~d~~~l~~~~~~----~~~-~i~i~~p-~nptG~~~~~~~l~~i~~~~~------~~~~~li~D~~~~~~~~~~~~~~~~ 238 (422)
+|++.|++.+++ +++ ++++++| +||||.+++.+++++|+++|+ ++|+++|+||+|..+.+++....++
T Consensus 162 ~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~ 241 (418)
T 3rq1_A 162 FNHEAFQNRVNELAAKQTNVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDEVRAF 241 (418)
T ss_dssp BCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCHHHHHGG
T ss_pred cCHHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCChHHHHHH
Confidence 999999998864 555 7788899 999999999999999999999 8999999999999887765322222
Q ss_pred c-ccC-CCCC--eEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhhh-----ccCcchHHHHHHHHHHhh
Q 014603 239 G-VFG-SIVP--VLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-----SSDPATFIQGAVPQILEK 309 (422)
Q Consensus 239 ~-~~~-~~~~--~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~a~~~~l~~ 309 (422)
. ... ..++ +++++|+||.|+++|+|+||+++..+ ++++++.+...... ++.++.+++.++..+|++
T Consensus 242 ~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 316 (418)
T 3rq1_A 242 FNKFSHLPKEILTCVCYSLSKGFTMYGQRVGAMIGISD-----DEEIADEFFEVNKSTSRATWSNICRPAMRTMANIVAD 316 (418)
T ss_dssp GGGGTTCCTTEEEEEEEESTTTTTCCSSCCEEEEEEES-----SHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHTC
T ss_pred HHHHHhcCCCceEEEEEeCCCCCcCcCCcceEEEEEeC-----CHHHHHHHHHHHHHHHhhccCCCchHHHHHHHHHhCC
Confidence 1 111 1233 58899999999999999999998210 05677777665421 245788899999988876
Q ss_pred ch-----HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecC
Q 014603 310 TE-----EEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPG 384 (422)
Q Consensus 310 ~~-----~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g 384 (422)
.. ...+++.+++++++++.+.+.|+++ ++. +..|.+++|+|+.++ +..++... ++++||.+.||
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~--------~~~~~~~~-l~~~gi~v~~g 385 (418)
T 3rq1_A 317 PAKFKEYEAERNCYYQLIRDRADIFKQEAAQV-GLP-MLPYRGGFFITIPTD--------SANAICEE-LKKEHIYVIAL 385 (418)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCC-CCCCCSSSEEEEECT--------THHHHHHH-HHHTTEECEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCC-CCCCCceEEEEcCCC--------CHHHHHHH-HHhCCEEEecC
Confidence 32 1234456678899999999999988 777 447888999998774 45666664 57789999998
Q ss_pred CCCCCCCeEEEEec-cChHHHHHHHHHHHHHHHHhcc
Q 014603 385 ITVGLKDWLRITFA-VEPSALEDGLGRMKAFYDRHAK 420 (422)
Q Consensus 385 ~~~~~~~~iRis~~-~~~~~l~~~~~~l~~~~~~~~~ 420 (422)
.+++|||++ .+++++++++++|+++++++.+
T Consensus 386 -----~~~iRis~~~~~~~~i~~~~~~l~~~l~~~~~ 417 (418)
T 3rq1_A 386 -----ANGIRIAACGIPKCQMTGLAEKIYNAMKSLGK 417 (418)
T ss_dssp -----SSEEEEEGGGSCHHHHTTHHHHHHHHHHHTTC
T ss_pred -----CCCeEEEEecCCHHHHHHHHHHHHHHHHHHhc
Confidence 368999998 6999999999999999987653
No 46
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=100.00 E-value=1.1e-44 Score=347.05 Aligned_cols=377 Identities=17% Similarity=0.164 Sum_probs=297.7
Q ss_pred cHHHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCC-CCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHH
Q 014603 17 NEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSA-FPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRA 95 (422)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~-~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ 95 (422)
+.+.....++.++.+...+.+...+..+.++|+|++|++.. .+.+++++.+.+++.+.... ....|.+..|.+++|++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~~~Y~~~~g~~~lr~~ 87 (413)
T 3t18_A 9 KRATWNNGPDLAFDINNKANAAIEKYGREAVINAALGTLLDDKGKIIALPSVYDRLDEMDRS-HIASYAPIEGEKDYRKI 87 (413)
T ss_dssp TTTCCCCCCCHHHHHHHHHHHHHHHHCGGGCEECCSCCCBCTTSCBCCCHHHHHHHHHSCHH-HHHSCCCTTCCHHHHHH
T ss_pred hhcccCCCCChHHHHHHHHhhhhhhccccceEeccccCccCCCCCcCChHHHHHHHHhcCcc-cccCcCCCCCCHHHHHH
Confidence 55667777888999988777666555677899999999732 22467888999988774432 23478888899999999
Q ss_pred HHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHH
Q 014603 96 IADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDA 175 (422)
Q Consensus 96 ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~ 175 (422)
+++++....+. .++++|++|+|+++|++.++++++++||+|+++.|+|.++...++..|.+++.+++.+++ +.+|++.
T Consensus 88 la~~~~~~~~~-~~~~~i~~t~g~~~al~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~d~~~ 165 (413)
T 3t18_A 88 VIDTLFGPYKP-EGYISAIATPGGTGAIRSAIFSYLDEGDPLICHDYYWAPYRKICEEFGRNFKTFEFFTDD-FAFNIDV 165 (413)
T ss_dssp HHHHHHGGGCC-SSEEEEEEESHHHHHHHHHHHHHCCSSCEEEEESSCCTHHHHHHHHHTCEEEEECCBCTT-SSBCHHH
T ss_pred HHHHHhcccCc-cccCcEEEcCccHHHHHHHHHHhcCCCCEEEECCCCcccHHHHHHHhCCeEEEeeccCCC-CCcCHHH
Confidence 99998664331 134499999999999999999999999999999999999999999999999999985433 7899999
Q ss_pred HHHhhcC----Cce-EEEEeCC-CCCcccccCHHHHHHHHHHHH------HcCcEEEEcccccccccCCCCCCCccc-cC
Q 014603 176 VEALADE----NTV-ALVIINP-GNPCGNVYTYQHLQKIAETAK------KLGIMVIADEVYDHLAFGNTPFVPMGV-FG 242 (422)
Q Consensus 176 l~~~~~~----~~~-~i~i~~p-~nptG~~~~~~~l~~i~~~~~------~~~~~li~D~~~~~~~~~~~~~~~~~~-~~ 242 (422)
|++.+++ +++ ++++++| +||||.+++.+++++|+++|+ ++|++||+||+|..+.+++....++.. ..
T Consensus 166 l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~ 245 (413)
T 3t18_A 166 YKEAIDEGIRDSDRIASLINSPGNNPTGYSLSDEEWDEVITFLKEKAEDKDKKITLIVDVAYLEFAGDGDQQRKFFEKFS 245 (413)
T ss_dssp HHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTTSTTCEEEEEEECTTGGGSSSSSTTTGGGGGGT
T ss_pred HHHHHHHHhhcCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhccCCcEEEEEecccccccCChhhHHHHHHHHh
Confidence 9998864 566 6788899 999999999999999999999 899999999999998887754333322 22
Q ss_pred -CCCC--eEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhhh-----ccCcchHHHHHHHHHHhhch---
Q 014603 243 -SIVP--VLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-----SSDPATFIQGAVPQILEKTE--- 311 (422)
Q Consensus 243 -~~~~--~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~a~~~~l~~~~--- 311 (422)
..++ +++++|+||.|+++|+|+||++++.+ .+++++.+...... +..++.+.+.++..+++...
T Consensus 246 ~~~~~~~~i~~~S~sK~~~~~G~riG~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~ 320 (413)
T 3t18_A 246 NLPRNLFVVVAFSMSKSHTAYGLRSGAAVGISS-----SKEIIEEFEASLAHSARCNWSNGTHAAQNILIELERAENKKI 320 (413)
T ss_dssp TCCTTEEEEEEEEHHHHTTCGGGCCEEEEEEES-----CHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTSHHHHHH
T ss_pred hcCCCeeEEEEEecCccCCCcCcCcEEEEEecC-----CHHHHHHHHHHHHHhhhccccCCChHHHHHHHHHhcChHHHH
Confidence 1233 48889999999999999999998310 05677777665421 23578888999888887532
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCC
Q 014603 312 -EEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLK 390 (422)
Q Consensus 312 -~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~ 390 (422)
....++.+++++++++.+.+.|+++ ++. +..|.+++|+|+.+. +..++...+ .++||.+.|| .
T Consensus 321 ~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~-~~~~~~~~~~~~~~~--------~~~~~~~~l-~~~gv~v~~g-----~ 384 (413)
T 3t18_A 321 YEQELVDLRNMLKSRADVFVTAAKEN-KLT-MIPYFGGFFTFIPTD--------KAFDIVKDL-EKENIFTIPS-----A 384 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHT-TCC-CBCCCSSSCEEEECS--------CHHHHHHHH-HHTTEECEEC-----S
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHc-CCC-ccCCCceEEEEeCCC--------CHHHHHHHH-HhCCEEEecC-----C
Confidence 2345567788999999999999988 777 447888899998763 466776655 6789999997 4
Q ss_pred CeEEEEec-cChHHHHHHHHHHHHHHHHhcc
Q 014603 391 DWLRITFA-VEPSALEDGLGRMKAFYDRHAK 420 (422)
Q Consensus 391 ~~iRis~~-~~~~~l~~~~~~l~~~~~~~~~ 420 (422)
+++||+++ .+++++ +++|.++++++.+
T Consensus 385 ~~iRis~~~~~~~~~---l~~l~~~l~~~~~ 412 (413)
T 3t18_A 385 KGIRVAICGVGEEKI---PKLVQRLAFYTNK 412 (413)
T ss_dssp SEEEECTTTSCGGGH---HHHHHHHHHHHHC
T ss_pred CceEEEEeeCCHHHH---HHHHHHHHHHHhc
Confidence 78999998 566777 8999999888754
No 47
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=100.00 E-value=2.7e-44 Score=342.70 Aligned_cols=373 Identities=16% Similarity=0.204 Sum_probs=285.5
Q ss_pred ccHHHhhccCcc-HHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCC----CCCCCCCCCCCH
Q 014603 16 ANEELKTASGIT-VRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSA----RFNCYSSTVGIL 90 (422)
Q Consensus 16 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~----~~~~y~~~~g~~ 90 (422)
++.++..++.+. +.++.++...+.....++++|+|+.|+++ ++++|.+.+++.+++... ....|++..+.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~ 78 (400)
T 3asa_A 3 RNPHFVSLTKNYLFADLQKRVAQFRLENPQHTVINLSIGDTT----QPLNASVAEAFASSIARLSSPTTCRGYGPDFGLP 78 (400)
T ss_dssp CCHHHHTCCCCCHHHHHHHHHHHHHHHCTTSCCEECSSCCCC----CCCCHHHHHHHHHHHHHHTSSSCCCCCCCTTCCH
T ss_pred cchhhhccCCcccHHHHHHHHHHhhhhcCCCceEeccCCCCC----CCCCHHHHHHHHHHHhcccccccccCCCCCCCCH
Confidence 467787777644 45555555554434457889999999865 567889999998887541 235788778899
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCe-EEEeeccCCCCc
Q 014603 91 PARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLE-VRHFDLLPAKGW 169 (422)
Q Consensus 91 ~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~ 169 (422)
++|+++++++. .|. +++++|++|+|++++++.++.. +++||+|+++.|+|+++...++..|.+ ++.++.++++++
T Consensus 79 ~lr~~la~~l~--~g~-~~~~~v~~~~G~~~al~~~~~~-~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~ 154 (400)
T 3asa_A 79 ALRQKLSEDFY--RGF-VDAKEIFISDGAKVDLFRLLSF-FGPNQTVAIQDPSYPAYLDIARLTGAKEIIALPCLQENAF 154 (400)
T ss_dssp HHHHHHHHTTS--TTS-SCGGGEEEESCHHHHHHHHHHH-HCSSCEEEEEESCCHHHHHHHHHTTCSEEEEEECCGGGTT
T ss_pred HHHHHHHHHHH--cCC-CCHHHEEEccChHHHHHHHHHH-cCCCCEEEECCCCcHHHHHHHHHcCCcceEecccchhcCc
Confidence 99999999964 233 6788999999999999997654 578999999999999999988889988 888887654444
Q ss_pred ccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCC-CCCeE
Q 014603 170 EVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IVPVL 248 (422)
Q Consensus 170 ~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~-~~~~i 248 (422)
..+++. . ++++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++....++..++. .++++
T Consensus 155 ~~~l~~----~-~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i 229 (400)
T 3asa_A 155 FPEFPE----D-THIDILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAI 229 (400)
T ss_dssp CCCCCT----T-CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEE
T ss_pred ccChhh----c-cCccEEEEeCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEchhhhhhcCCCCCCchhhCCCCCCceE
Confidence 444332 1 46889999999999999999999999999999999999999999987776543344545432 34689
Q ss_pred EEecCccccCCCCceeEEEEeeCCCCcccchhH-------HHHHHhh-h-hhccCcchHHHHHHHHHHhhchHHHHHHHH
Q 014603 249 TLGSISKRWIVPGWRLGWLVTSDPNGILQDSGI-------VDSIKSF-L-NISSDPATFIQGAVPQILEKTEEEFFSKIT 319 (422)
Q Consensus 249 ~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~-------~~~~~~~-~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~ 319 (422)
++.|+||.|+++|+|+||+++++ ++ ++.+... . ...++++.+.|.++.++|+.. ++++.+
T Consensus 230 ~~~s~sK~~g~~GlriG~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~ 298 (400)
T 3asa_A 230 EINSFSKPLGFAGIRLGWTVIPQ--------ELTYADGHFVIQDWERFLSTTFNGASIPAQEAGVAGLSIL---PQLEAI 298 (400)
T ss_dssp EEEECCGGGTTTTCCCEEEECCT--------TCBCTTSCBHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHT---TTCHHH
T ss_pred EEecchhhcCCcchheeEEeeCh--------hhccchhhhHHHHHHHHhccCccCCChHHHHHHHHHhCcH---HHHHHH
Confidence 99999999988999999999864 23 3333221 2 223467889999998888753 577788
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEe-cCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC--CCeEEEE
Q 014603 320 DILRETADICCDRLKEIPCITCPKKPEGSMFVMVK-LNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL--KDWLRIT 396 (422)
Q Consensus 320 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRis 396 (422)
++++++++.+.+.|+++ ++. +..|.+++|+|+. ++.. .++.++...+++++||.+.||..|+. ++++||+
T Consensus 299 ~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~gv~v~~g~~f~~~~~~~iRis 371 (400)
T 3asa_A 299 HYYRENSDLLRKALLAT-GFE-VFGGEHAPYLWVKPTQAN-----ISDRDLFDFFLREYHIAITPGIGFGRSGSGFVRFS 371 (400)
T ss_dssp HHHHHHHHHHHHHHHHT-TCE-EEECSSSSEEEEECCCTT-----CCTTTHHHHHHHHHSEECEEGGGGCGGGTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHC-CCe-eeCCCCceEEEEeccCCC-----CCHHHHHHHHHHhCCEEEeChhHhCCCCCCEEEEE
Confidence 89999999999999987 776 4356678899998 7532 13446677777777999999988763 6789999
Q ss_pred eccChHHHHHHHHHHHHHHHHhc
Q 014603 397 FAVEPSALEDGLGRMKAFYDRHA 419 (422)
Q Consensus 397 ~~~~~~~l~~~~~~l~~~~~~~~ 419 (422)
+..+++++++++++|+++++++.
T Consensus 372 ~~~~~e~i~~~l~~l~~~~~~~~ 394 (400)
T 3asa_A 372 SLGKREDILAACERLQMAPALQS 394 (400)
T ss_dssp CCSCHHHHHHHHHHHHC------
T ss_pred eeCCHHHHHHHHHHHHHHHHhhh
Confidence 77889999999999999987653
No 48
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=100.00 E-value=7.6e-44 Score=343.38 Aligned_cols=362 Identities=21% Similarity=0.356 Sum_probs=291.9
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCC-----------CCCCCCCCCCHHHHHHHHHHHhhcCC--CCCC
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSAR-----------FNCYSSTVGILPARRAIADYLNRDLP--YKLS 109 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~-----------~~~y~~~~g~~~lr~~ia~~l~~~~~--~~~~ 109 (422)
++..+|+|+.+.- ...++.+.+++.++..... ...|++..|.+++|+++++++++..+ ..++
T Consensus 36 ~p~~~i~lg~~~~-----~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~ 110 (435)
T 3piu_A 36 NTNGIIQMGLAEN-----QLCFDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFD 110 (435)
T ss_dssp BTTSBEECSSCCC-----CSSHHHHHHHHHHCTTGGGTEETTEECHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTSSCCC
T ss_pred CCCCeEEeccccc-----cccHHHHHHHHHhCccccccccccccccccccccCCCCCcHHHHHHHHHHHHHhhCCCCCCC
Confidence 3555788888652 2347788888887654221 13688888999999999999985433 4567
Q ss_pred CCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHh-hCCCeEEEeeccCCCCcccCHHHHHHhhcC------
Q 014603 110 PDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARAT-HSHLEVRHFDLLPAKGWEVDLDAVEALADE------ 182 (422)
Q Consensus 110 ~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------ 182 (422)
+++|++|+|+++|+..++.+++++||.|+++.|+|+++...+. ..|.+++.++.++.+++.+|++.|++.+++
T Consensus 111 ~~~v~~~~gg~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ 190 (435)
T 3piu_A 111 PNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNL 190 (435)
T ss_dssp GGGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHTTTTTCCEEEEEECCGGGTSCCCHHHHHHHHHHHHHTTC
T ss_pred HHHEEEcCChHHHHHHHHHHhcCCCCeEEECCCccccHHHHHHHhcCCEEEEeeCCCccCCcCCHHHHHHHHHHHHhcCC
Confidence 8999999999999999999999999999999999999988877 789999999987766678899999998865
Q ss_pred CceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCC----------CCCeEEEec
Q 014603 183 NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS----------IVPVLTLGS 252 (422)
Q Consensus 183 ~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~----------~~~~i~i~s 252 (422)
+++++++++|+||||.+++.+++++|+++|+++|+++|+||+|+.+.|++....++..+.. .++++++.|
T Consensus 191 ~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~i~i~s 270 (435)
T 3piu_A 191 RVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYS 270 (435)
T ss_dssp CEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSCCCCHHHHHHC-------CGGGGEEEEEE
T ss_pred CeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcCHHHhccccccccccCCCCCEEEEEe
Confidence 7889999999999999999999999999999999999999999998887765555443322 356899999
Q ss_pred CccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhhhccCcchHHHHHHHHHHhhch--HHHHHHHHHHHHHHHHHHH
Q 014603 253 ISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQGAVPQILEKTE--EEFFSKITDILRETADICC 330 (422)
Q Consensus 253 ~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~~l~ 330 (422)
+||.|+++|+|+||+++++ +++.+.+...... ...+++.+.++.++++... +.++++.+++++++++.+.
T Consensus 271 ~sK~~g~~G~r~G~~~~~~-------~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~ 342 (435)
T 3piu_A 271 LSKDLGLPGFRVGAIYSND-------DMVVAAATKMSSF-GLVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLV 342 (435)
T ss_dssp SSSSSCCGGGCEEEEEESC-------HHHHHHHHHHGGG-SCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eecccCCCceeEEEEEeCC-------HHHHHHHHHHhhc-CCCCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999988999999999853 4566666654433 4667888988888887633 3467788899999999999
Q ss_pred HHhhcCCCCCCCCCCCCceEEEEecCcccccCC-CCHHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEecc-ChHHHHH
Q 014603 331 DRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGI-NSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAV-EPSALED 406 (422)
Q Consensus 331 ~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRis~~~-~~~~l~~ 406 (422)
+.|+++ ++. +..+.+|+++|+.++....... .+..++...+++++||.+.||..|+. ++++||+++. +++++++
T Consensus 343 ~~L~~~-g~~-~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~e~i~~ 420 (435)
T 3piu_A 343 SGLQKS-GIS-CLNGNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDL 420 (435)
T ss_dssp HHHHTT-TCE-ECCCCSSSEEEEECGGGSSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSTTEEEEECSSSCHHHHHH
T ss_pred HHHHhc-CCc-ccCCCeeEEEEEEcccccccCCchhHHHHHHHHHHHCCEEEeCCcccCCCCCCEEEEEeeCCCHHHHHH
Confidence 999988 777 4467778999999875311000 02346677777777999999988754 6899999985 8999999
Q ss_pred HHHHHHHHHHHhc
Q 014603 407 GLGRMKAFYDRHA 419 (422)
Q Consensus 407 ~~~~l~~~~~~~~ 419 (422)
++++|+++++++.
T Consensus 421 ~l~~l~~~l~~~~ 433 (435)
T 3piu_A 421 AMQRLKAFVGEYY 433 (435)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998765
No 49
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=100.00 E-value=1.1e-44 Score=348.74 Aligned_cols=349 Identities=16% Similarity=0.219 Sum_probs=286.0
Q ss_pred CCCceeecCCCC-CCCCCCCCcHHH--HHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCC---EEEec
Q 014603 44 TRPLIPLGHGDP-SAFPSFRTASVA--VDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDD---VYLTL 117 (422)
Q Consensus 44 ~~~~i~l~~g~~-~~~~~~~~~~~v--~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~---i~~~~ 117 (422)
.+++|||+.|.+ . ++.+|.+ .+++.+.+.......|++..|.+++|+++++++.+.. .++++++ |++|+
T Consensus 46 ~~~~i~l~~g~~~~----~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~-~~~~~~~~~~i~~t~ 120 (430)
T 2x5f_A 46 KSTTYNATIGMATN----KDGKMFASSLDAMFNDLTPDEIFPYAPPQGIEELRDLWQQKMLRDN-PELSIDNMSRPIVTN 120 (430)
T ss_dssp TTCSEECCCSSCEE----TTEECCCHHHHTTBSSCCGGGTSSCCCTTCCHHHHHHHHHHHHHHC-TTCCGGGBCCCEEES
T ss_pred CCCcEEeeeeeccC----CCCchhhHHHHHHHHhcCcccccccCCCCCCHHHHHHHHHHHhccC-cccCCCccceEEEcC
Confidence 357899999996 4 3445555 6666665543234689888889999999999997764 5677888 99999
Q ss_pred CHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhh-CCCeEEEeeccCCCCcccCHHHHHHhhcC---CceEEEEeCCC
Q 014603 118 GCTQAIEVILTVLARPGANILLPRPGFPYYEARATH-SHLEVRHFDLLPAKGWEVDLDAVEALADE---NTVALVIINPG 193 (422)
Q Consensus 118 g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~d~~~l~~~~~~---~~~~i~i~~p~ 193 (422)
|+++|++.++++++++||+|+++.|+|+++...++. .|.+++.++.++.+ +.+|++.|++.+++ +++++++++|+
T Consensus 121 g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~-~~~d~~~l~~~l~~~~~~~~~v~i~~p~ 199 (430)
T 2x5f_A 121 ALTHGLSLVGDLFVNQDDTILLPEHNWGNYKLVFNTRNGANLQTYPIFDKD-GHYTTDSLVEALQSYNKDKVIMILNYPN 199 (430)
T ss_dssp HHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHTTTTCCEEEEECCBCTT-SCBCSHHHHHHHHHCCSSEEEEEECSSC
T ss_pred CchHHHHHHHHHHhCCCCEEEEcCCcCccHHHHHHHhcCCeEEEEeccCcc-CCcCHHHHHHHHHhcCCCCEEEEEcCCC
Confidence 999999999999999999999999999999999998 99999999876533 67899999998876 78899999999
Q ss_pred CCcccccCHHHHHHHHHHHHH-----cCcEEEEcccccccccCCCCCCCcc-ccCC-CCC---eEEEecCccccCCCCce
Q 014603 194 NPCGNVYTYQHLQKIAETAKK-----LGIMVIADEVYDHLAFGNTPFVPMG-VFGS-IVP---VLTLGSISKRWIVPGWR 263 (422)
Q Consensus 194 nptG~~~~~~~l~~i~~~~~~-----~~~~li~D~~~~~~~~~~~~~~~~~-~~~~-~~~---~i~i~s~sK~~~~~G~r 263 (422)
||||.+++.+++++|+++|++ +|+++|+||+|+.+.+++....++. .+.. .++ ++++.|+||.|+++|+|
T Consensus 200 nptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r 279 (430)
T 2x5f_A 200 NPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGATKEFFAWGFR 279 (430)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEEEEHHHHTTCGGGC
T ss_pred CCCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCcccchHHHHHHhhccCCcceEEEEEecccCCCCCCCC
Confidence 999999999999999999999 9999999999999888765444443 3322 456 89999999999889999
Q ss_pred eEEEEe---eCCCCcccchhHHHHHHhhhh-----hccCcchHHHHHHHHHHh-hch-HHHHHHHHHHHHHHHHHHHHHh
Q 014603 264 LGWLVT---SDPNGILQDSGIVDSIKSFLN-----ISSDPATFIQGAVPQILE-KTE-EEFFSKITDILRETADICCDRL 333 (422)
Q Consensus 264 ~G~~~~---~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~a~~~~l~-~~~-~~~~~~~~~~~~~~~~~l~~~L 333 (422)
+||+++ + +++++.+..... .+.+++.+.|.++.++|+ ... ...+++.+++++++++.+.+.|
T Consensus 280 iG~~~~~~~~--------~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L 351 (430)
T 2x5f_A 280 VGFMTFGTSD--------QTTKEVLEAKVKGLIRSNISSGPLPTQSAVKHVLKNNKQFDKEIEQNIQTLKERYEVTKEVV 351 (430)
T ss_dssp CEEEEEBCCC--------HHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEecCC--------HHHHHHHHHHHhhhhhcccCCCChHHHHHHHHHHccChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998 5 567777766543 345788999999999998 631 2334448889999999999999
Q ss_pred h----cCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec-cChHHHHHHH
Q 014603 334 K----EIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA-VEPSALEDGL 408 (422)
Q Consensus 334 ~----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~-~~~~~l~~~~ 408 (422)
+ +. ++. +..|.+|+|+|+.++ . .+..++...+++++||.+.|| ..+++||+++ .+++++++++
T Consensus 352 ~~~~~~~-g~~-~~~~~~g~~~~~~~~-~-----~~~~~~~~~l~~~~gi~v~~g----~~~~iRis~~~~~~e~i~~~~ 419 (430)
T 2x5f_A 352 YADQYHS-HWQ-AYDFNSGYFMAIKVH-D-----VDPEALRKHLIDKYSIGVIAL----NATDIRIAFSCVEKDDIPHVF 419 (430)
T ss_dssp TCGGGTT-TEE-ECCCCBSSEEEEEES-S-----SCHHHHHHHHHHHHCEECEEC----SSSEEEEEGGGSCGGGHHHHH
T ss_pred HhhCCCC-Cce-eeCCCceEEEEeCCC-C-----CCHHHHHHHHHHhCCEEEecC----CCCeEEEEEecCCHHHHHHHH
Confidence 8 55 666 446778889999887 2 156778787766579999998 3579999999 8899999999
Q ss_pred HHHHHHHHHh
Q 014603 409 GRMKAFYDRH 418 (422)
Q Consensus 409 ~~l~~~~~~~ 418 (422)
++|+++++++
T Consensus 420 ~~l~~~l~~~ 429 (430)
T 2x5f_A 420 DSIAKAIDDL 429 (430)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhc
Confidence 9999998765
No 50
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=100.00 E-value=1.3e-43 Score=341.17 Aligned_cols=359 Identities=20% Similarity=0.358 Sum_probs=285.2
Q ss_pred CCceeecCCCCCCCCCCCCcHHHHHHHHHHhhC----------CCCCCCCCCCCCHHHHHHHHHHHhhcCCCC--CCCCC
Q 014603 45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRS----------ARFNCYSSTVGILPARRAIADYLNRDLPYK--LSPDD 112 (422)
Q Consensus 45 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~----------~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~--~~~~~ 112 (422)
..+|+|+.+... + .++.+.+++.++... .....|++..|..++|+++++++++.+|.. +++++
T Consensus 36 ~~~i~l~~~~~~----~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~~ 110 (428)
T 1iay_A 36 NGVIQMGLAENQ----L-CLDLIEDWIKRNPKGSICSEGIKSFKAIANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPER 110 (428)
T ss_dssp TSBEECSSCCCC----S-SHHHHHHHHHHCTTSSTTC----CHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTCSCCCTTS
T ss_pred Cceeeeccccch----h-hHHHHHHHHHhccccccccccccccHhhcCCCCCCCcHHHHHHHHHHHHHhcCCCCCCChhh
Confidence 568999977622 2 346888888754310 013478887789999999999998877655 77899
Q ss_pred EEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHh-hCCCeEEEeeccCCCCcccCHHHHHHhhcC------Cce
Q 014603 113 VYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARAT-HSHLEVRHFDLLPAKGWEVDLDAVEALADE------NTV 185 (422)
Q Consensus 113 i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~ 185 (422)
|++++|+++++..++++++++||+|+++.|+|+++...+. ..|.+++.++.+.++++.+|++.+++.+++ +++
T Consensus 111 i~~~~G~~~ai~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~ 190 (428)
T 1iay_A 111 VVMAGGATGANETIIFCLADPGDAFLVPSPYYPAFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVK 190 (428)
T ss_dssp CEEEEHHHHHHHHHHHHHCCTTCEEEEESSCCTTHHHHTTTTTCCEEEEECCCTTTTTCCCHHHHHHHHHHHHHTTCCEE
T ss_pred EEEccChHHHHHHHHHHhCCCCCeEEEccCCCcchHHHHHHhcCCEEEEeecCCccCCcCCHHHHHHHHHHHHhcCCceE
Confidence 9999999999999999999999999999999999876554 679999998886555677899999988753 688
Q ss_pred EEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCC--------CCCeEEEecCcccc
Q 014603 186 ALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS--------IVPVLTLGSISKRW 257 (422)
Q Consensus 186 ~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~--------~~~~i~i~s~sK~~ 257 (422)
++++++|+||||.+++.+++++|+++|+++|+++|+||+|..+.+++....++..+.. .++++++.|+||.|
T Consensus 191 ~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~~ 270 (428)
T 1iay_A 191 GLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDM 270 (428)
T ss_dssp EEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTS
T ss_pred EEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccccccCCCCccCHHHhccccccccCCCCcEEEEecchhhc
Confidence 8999999999999999999999999999999999999999998776644434433322 36789999999999
Q ss_pred CCCCceeEEEEeeCCCCcccchhHHHHHHhhhhhccCcchHHHHHHHHHHhhch--HHHHHHHHHHHHHHHHHHHHHhhc
Q 014603 258 IVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQGAVPQILEKTE--EEFFSKITDILRETADICCDRLKE 335 (422)
Q Consensus 258 ~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~~l~~~L~~ 335 (422)
+++|+|+||+++++ +++++.+...... .+++.++|.++..+|+... +.++++.+++++++++.+.+.|++
T Consensus 271 g~~Glr~G~~~~~~-------~~~~~~~~~~~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 342 (428)
T 1iay_A 271 GLPGFRVGIIYSFN-------DDVVNCARKMSSF-GLVSTQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEV 342 (428)
T ss_dssp SCGGGCEEEEEESC-------HHHHHHHHHHHTT-SCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCceEEEEEeCC-------HHHHHHHHHHHhc-ccCCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 88999999999853 4677777655433 4678899999999998632 347788889999999999999999
Q ss_pred CCCCCCCCCCCCceEEEEecCcccccC-CCCHHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEec-cChHHHHHHHHHH
Q 014603 336 IPCITCPKKPEGSMFVMVKLNYSLLEG-INSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFA-VEPSALEDGLGRM 411 (422)
Q Consensus 336 ~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRis~~-~~~~~l~~~~~~l 411 (422)
+ ++. +..+.+|+|+|++++...... .....++...+++++||.+.+|..|+. ++++||+++ .+++++++++++|
T Consensus 343 ~-g~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~~~~~~~~~~~~iRis~~~~~~e~i~~~~~~l 420 (428)
T 1iay_A 343 V-GIK-CLKNNAGLFCWMDLRPLLRESTFDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFANMDDGTVDIALARI 420 (428)
T ss_dssp T-TCC-BCCCSSSSEEEEECGGGCSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSSSEEEEECSSSCHHHHHHHHHHH
T ss_pred c-CCc-ccCCCeeEEEEEechhhcCCCchhHHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEecCCHHHHHHHHHHH
Confidence 8 776 435667899999986421000 002345666666666999999988765 579999999 8999999999999
Q ss_pred HHHHHHh
Q 014603 412 KAFYDRH 418 (422)
Q Consensus 412 ~~~~~~~ 418 (422)
++++++.
T Consensus 421 ~~~l~~~ 427 (428)
T 1iay_A 421 RRFVGVE 427 (428)
T ss_dssp HHHHHTT
T ss_pred HHHHhcc
Confidence 9998753
No 51
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=100.00 E-value=2.3e-44 Score=343.04 Aligned_cols=366 Identities=16% Similarity=0.145 Sum_probs=288.5
Q ss_pred HHhhccCccHHHHHHHHHhhhhccCCCCceeecCC---CCCCCCCCCCcHHHHHHHHH-HhhCCCCCCCCCCCCCHHHHH
Q 014603 19 ELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHG---DPSAFPSFRTASVAVDAIVH-SVRSARFNCYSSTVGILPARR 94 (422)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g---~~~~~~~~~~~~~v~~a~~~-~~~~~~~~~y~~~~g~~~lr~ 94 (422)
++...+++.++.+...+.+. ..+++|||+.| ++. ...+.++.+.+++.+ .+.......|++..|.+++|+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~----~~~~~i~l~~g~y~d~~--~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~ 77 (397)
T 3fsl_A 4 KVDAYAGDPILTLMERFKED----PRSDKVNLSIGLYYNED--GIIPQLQAVAEAEARLNAQPHGASLYLPMEGLNCYRH 77 (397)
T ss_dssp TCCCCCCCHHHHHHHHHHTC----CCSCCEECSSCCCCCTT--SCCCCCHHHHHHHHHHHHSCCCCCCCCCTTCCHHHHH
T ss_pred cCCCCCCCchhhHHHHHhcC----CCCCeEEEeeeEEECCC--CCccCcHHHHHHHHhhccCccccccCCCCCchHHHHH
Confidence 45667778888888766654 46779999999 433 123456999999999 887645568988889999999
Q ss_pred HHHHHHhhcCCCCCCCC--CEEEecCHHHHHHHHHH--HhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcc
Q 014603 95 AIADYLNRDLPYKLSPD--DVYLTLGCTQAIEVILT--VLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWE 170 (422)
Q Consensus 95 ~ia~~l~~~~~~~~~~~--~i~~~~g~~~a~~~~~~--~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 170 (422)
++++++....+..++++ +|++|+|++++++.+++ +++++||+|+++.|+|+++...++..|.+++.++..+.+++.
T Consensus 78 ~la~~~~~~~~~~~~~~~~~i~~t~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 157 (397)
T 3fsl_A 78 AIAPLLFGADHPVLKQQRVATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNG 157 (397)
T ss_dssp HHHHHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCHHHHHHHHHTTCCEEEECCEETTTTE
T ss_pred HHHHHHhcCCcccccccceEEEEcCCcHHHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHHcCCceEEEeeeeccCCc
Confidence 99999976443333678 89999999999999954 557899999999999999999999999999999885445678
Q ss_pred cCHHHHHHhhc---CCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCC-CCCCcccc-CCCC
Q 014603 171 VDLDAVEALAD---ENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNT-PFVPMGVF-GSIV 245 (422)
Q Consensus 171 ~d~~~l~~~~~---~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~-~~~~~~~~-~~~~ 245 (422)
+|++.+++.++ ++++++++++|+||||.+++.+++++|+++|+++|+++|+||+|+.+.+++. ...++..+ +..+
T Consensus 158 ~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~ 237 (397)
T 3fsl_A 158 VRFNDLLATLKTLQAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGL 237 (397)
T ss_dssp ECHHHHHHHHTTCCTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTC
T ss_pred CcHHHHHHHHHhCCCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccHHHHHHHhcCC
Confidence 99999999887 5678888999999999999999999999999999999999999999887632 12223222 2346
Q ss_pred CeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhh----h-hhccCcchHHHHHHHHHHhhch-----HHHH
Q 014603 246 PVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSF----L-NISSDPATFIQGAVPQILEKTE-----EEFF 315 (422)
Q Consensus 246 ~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~a~~~~l~~~~-----~~~~ 315 (422)
++++++|+||.|+++|+|+||++++.+. ++++..+... . ..+.+++.+.+.++..++.... ..++
T Consensus 238 ~~i~~~S~SK~~~~~G~riG~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~ 312 (397)
T 3fsl_A 238 PALVSNSFSKIFSLYGERVGGLSVMCED-----AEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEALKASWLKEV 312 (397)
T ss_dssp CEEEEEECTTTTTCGGGCCEEEEEECSS-----HHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHTSHHHHHHHHHHH
T ss_pred CEEEEecccccccCcCCCeeEEEEecCC-----HHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 7899999999999999999999864221 3444433222 1 2344667888888888887532 4667
Q ss_pred HHHHHHHHHHHHHHHHHhhcCC---CCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCe
Q 014603 316 SKITDILRETADICCDRLKEIP---CITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDW 392 (422)
Q Consensus 316 ~~~~~~~~~~~~~l~~~L~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~ 392 (422)
++.+++++++++.+.+.|++++ ++. +..|.+|+|+|+.++ . +.+..+++++||.+.||.
T Consensus 313 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~~~~~~~~~~---------~-~~~~~~l~~~gi~v~~g~------- 374 (397)
T 3fsl_A 313 EEMRTRILAMRQELVKVLSTEMPERNFD-YLLNQRGMFSYTGLS---------A-AQVDRLREEFGVYLIASG------- 374 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCTTSCCT-HHHHCCSSEEECCCC---------H-HHHHHHHHTTCEECCTTC-------
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCce-eecCCceEEEecCCC---------H-HHHHHHHHhCCEEECCCC-------
Confidence 8889999999999999999874 566 446778899997763 3 335566788899999974
Q ss_pred EEEEecc-ChHHHHHHHHHHHHH
Q 014603 393 LRITFAV-EPSALEDGLGRMKAF 414 (422)
Q Consensus 393 iRis~~~-~~~~l~~~~~~l~~~ 414 (422)
||+++. +++++++++++|+++
T Consensus 375 -Ris~~~~~~~~i~~~~~~l~~~ 396 (397)
T 3fsl_A 375 -RMCVAGLNTANVQRVAKAFAAV 396 (397)
T ss_dssp -EEEGGGCCTTTHHHHHHHHHHH
T ss_pred -eEEEEecCHhhHHHHHHHHHhh
Confidence 999984 888899999999876
No 52
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=100.00 E-value=1.1e-43 Score=333.07 Aligned_cols=336 Identities=17% Similarity=0.252 Sum_probs=285.5
Q ss_pred cCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHH
Q 014603 42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ 121 (422)
Q Consensus 42 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 121 (422)
.++..+|||+.|.+. +++++.+.+++.+.+.. ...|+. .+.+++|+++++++ ++++++|++|+|+++
T Consensus 13 ~~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~--~~~y~~-~~~~~l~~~la~~~------~~~~~~i~~~~g~~~ 79 (354)
T 3ly1_A 13 PSTDNPIRINFNENP----LGMSPKAQAAARDAVVK--ANRYAK-NEILMLGNKLAAHH------QVEAPSILLTAGSSE 79 (354)
T ss_dssp CCSSSCEECSSCCCS----SCCCHHHHHHHHHTGGG--TTSCCH-HHHHHHHHHHHHHT------TSCGGGEEEESHHHH
T ss_pred CCCCceEEccCCCCC----CCCCHHHHHHHHHHHhh--CcCCCC-CchHHHHHHHHHHh------CCChHHEEEeCChHH
Confidence 467889999999844 67889999999998874 456754 57889999999998 467889999999999
Q ss_pred HHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhc--CCceEEEEeCCCCCcccc
Q 014603 122 AIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALAD--ENTVALVIINPGNPCGNV 199 (422)
Q Consensus 122 a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~--~~~~~i~i~~p~nptG~~ 199 (422)
+++.++++++++||+|+++.|+|+++...++..|.+++.++.++ ++.+|++.|++.++ ++++++++++|+||||.+
T Consensus 80 a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~d~~~l~~~l~~~~~~~~v~l~~p~nptG~~ 157 (354)
T 3ly1_A 80 GIRAAIEAYASLEAQLVIPELTYGDGEHFAKIAGMKVTKVKMLD--NWAFDIEGLKAAVAAYSGPSIVYLVNPNNPTGTI 157 (354)
T ss_dssp HHHHHHHHHCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECCCT--TSCCCHHHHHHHHHTCSSCEEEEEESSCTTTCCC
T ss_pred HHHHHHHHHhCCCCeEEECCCCchHHHHHHHHcCCEEEEecCCC--CCCCCHHHHHHHhccCCCCCEEEEeCCCCCcCCC
Confidence 99999999999999999999999999999999999999998753 46799999999998 789999999999999999
Q ss_pred cCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCC-CCeEEEecCccccCCCCceeEEEEeeCCCCcccc
Q 014603 200 YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSI-VPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQD 278 (422)
Q Consensus 200 ~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~-~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~ 278 (422)
++.+++.+|+++| ++|+++|+|++|+.+.+++.....+...+.. +++++++|+||.++++|+|+||++++
T Consensus 158 ~~~~~l~~l~~~~-~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~-------- 228 (354)
T 3ly1_A 158 TPADVIEPWIASK-PANTMFIVDEAYAEFVNDPRFRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAVAH-------- 228 (354)
T ss_dssp CCHHHHHHHHHTC-CTTEEEEEECTTGGGCCCTTCCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEEECC--------
T ss_pred cCHHHHHHHHHhC-CCCeEEEEeccHHHhccccccCCHHHHhhhcCCCEEEEeeChhhccChhhhheeeecC--------
Confidence 9999999999999 8999999999999888766543333333444 67899999999998899999999985
Q ss_pred hhHHHHHHhhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcc
Q 014603 279 SGIVDSIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYS 358 (422)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~ 358 (422)
+++.+.+...... .+++.+.+.++.++|+. ..++++.+++++++++.+.+.|+++ ++. + .+..+.|+|+.++.
T Consensus 229 ~~~~~~~~~~~~~-~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~-~~~-~-~~~~~~~~~~~~~~- 301 (354)
T 3ly1_A 229 PTVIALMGRYVAG-EKINFSGVDAALASMND--SAFITYSKKSNDVSRQILLKALEDL-KLP-Y-LPSEGNFVFHQLVV- 301 (354)
T ss_dssp HHHHHHHGGGTTC-SCCCHHHHHHHHHHTTC--HHHHHHHHHHHHHHHHHHHHHHHHH-TCC-B-CCCCSSEEEEECSS-
T ss_pred HHHHHHHHHhcCC-CCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCe-E-CCCCceEEEEECCC-
Confidence 5788888776654 57888999999999985 3778889999999999999999988 676 3 35567789998864
Q ss_pred cccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEeccChHHHHHHHHHHHHHHHH
Q 014603 359 LLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALEDGLGRMKAFYDR 417 (422)
Q Consensus 359 ~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~l~~~~~~l~~~~~~ 417 (422)
+..++...+. ++||.+. |..++.++++||+++ +++++++++++|++++++
T Consensus 302 ------~~~~~~~~l~-~~gi~v~-g~~~~~~~~iRis~~-~~~~i~~~~~~l~~~l~~ 351 (354)
T 3ly1_A 302 ------PLKDYQTHMA-DAGVLIG-RAFPPADNWCRISLG-TPQEMQWVADTMREFRKK 351 (354)
T ss_dssp ------CHHHHHHHHH-HTTEECC-CCCTTCTTEEEEECC-CHHHHHHHHHHHHHHHHT
T ss_pred ------CHHHHHHHHH-HCCEEEe-ecCCCCCCEEEEEcC-CHHHHHHHHHHHHHHHHh
Confidence 4566766664 5799998 777667899999988 678999999999998864
No 53
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=100.00 E-value=7.8e-44 Score=335.50 Aligned_cols=334 Identities=15% Similarity=0.222 Sum_probs=281.7
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 122 (422)
+.+++|+|+.+.+. +++++.+.+++.+.+.. ...|++..+ .++|+++++++ ++++++|++|+|++++
T Consensus 28 ~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~--~~~y~~~~~-~~lr~~la~~~------~~~~~~v~~~~g~~~a 94 (365)
T 3get_A 28 GVKEVIKLASNENP----FGTPPKAIECLRQNANK--AHLYPDDSM-IELKSTLAQKY------KVQNENIIIGAGSDQV 94 (365)
T ss_dssp TCSCCEECSSCCCT----TCSCHHHHHHHHHHGGG--TTSCCCTTC-HHHHHHHHHHH------TCCGGGEEEESSHHHH
T ss_pred CCCceEEecCCCCC----CCCCHHHHHHHHHHHHh--hccCCCCCh-HHHHHHHHHHh------CCCcceEEECCCHHHH
Confidence 44789999999855 67889999999998864 457877665 89999999999 5678899999999999
Q ss_pred HHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCH
Q 014603 123 IEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTY 202 (422)
Q Consensus 123 ~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~ 202 (422)
++.++.+++++||+|+++.|+|.++...++..|.+++.+++ +.+++ +|++.+++.++++++++++++|+||||.+++.
T Consensus 95 ~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~-~~~~~-~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~ 172 (365)
T 3get_A 95 IEFAIHSKLNSKNAFLQAGVTFAMYEIYAKQCGAKCYKTQS-ITHNL-DEFKKLYETHKDEIKLIFLCLPNNPLGECLDA 172 (365)
T ss_dssp HHHHHHHHCCTTCEEEECSSCCTHHHHHHHHHTCEEEECSS-SSCCH-HHHHHHHHHTTTTEEEEEEESSCTTTCCCCCH
T ss_pred HHHHHHHHhCCCCEEEEeCCChHHHHHHHHHcCCEEEEEec-CCCCC-CCHHHHHHHhCCCCCEEEEcCCCCCCCCCcCH
Confidence 99999999999999999999999999999999999999987 34567 99999999998899999999999999999999
Q ss_pred HHHHHHHHHHHHcCcEEEEccccccccc--CCCCCCC-ccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccch
Q 014603 203 QHLQKIAETAKKLGIMVIADEVYDHLAF--GNTPFVP-MGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDS 279 (422)
Q Consensus 203 ~~l~~i~~~~~~~~~~li~D~~~~~~~~--~~~~~~~-~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~ 279 (422)
+++.+|+++| ++|+++|+|++|+.+.+ .+....+ ....+..+++++++|+||.++++|+|+||++++ +
T Consensus 173 ~~l~~l~~~~-~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~--------~ 243 (365)
T 3get_A 173 SEATEFIKGV-NEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGIAN--------A 243 (365)
T ss_dssp HHHHHHHHTS-CTTSEEEEECTTHHHHHHHCGGGCCCHHHHHHHCTTEEEEEESSSTTSCTTTCCEEEEEC--------H
T ss_pred HHHHHHHHhC-CCCcEEEEeCccHHHhcccCCcccccHhHHhccCCCEEEEeecchHhcCcchheEEEEcC--------H
Confidence 9999999999 57999999999998774 3322222 222233456899999999999999999999985 5
Q ss_pred hHHHHHHhhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCccc
Q 014603 280 GIVDSIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSL 359 (422)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~ 359 (422)
++.+.+...... .+++.+.+.++.++|+. ..++++.+++++++++.+.+.|+++ ++. + .+..+.|+|+.++..
T Consensus 244 ~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~-g~~-~-~~~~~~~~~~~~~~~- 316 (365)
T 3get_A 244 NIISAFYKLRAP-FNVSNLALKAAVAAMDD--DEFTEKTLENNFSQMELYKEFAKKH-NIK-I-IDSYTNFITYFFDEK- 316 (365)
T ss_dssp HHHHHHHHHSCT-TCSCHHHHHHHHHHHTC--HHHHHHHHHHHHHHHHHHHHHHHHT-TCE-E-CCCSSSEEEEECSSS-
T ss_pred HHHHHHHHhcCC-CCcCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHhC-CCE-E-CCCCCeEEEEECCCC-
Confidence 788888776544 36888999999999985 4788999999999999999999998 776 4 355567889988742
Q ss_pred ccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEeccChHHHHHHHHHHHHHH
Q 014603 360 LEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALEDGLGRMKAFY 415 (422)
Q Consensus 360 ~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~l~~~~~~l~~~~ 415 (422)
+..++...+ .++||.+.||..|+ .+++|++++ ++++++++++.|++++
T Consensus 317 -----~~~~~~~~l-~~~gi~v~~g~~~~-~~~iRis~~-~~~~i~~l~~~l~~~l 364 (365)
T 3get_A 317 -----NSTDLSEKL-LKKGIIIRNLKSYG-LNAIRITIG-TSYENEKFFTEFDKIL 364 (365)
T ss_dssp -----CHHHHHHHH-HTTTEECEECGGGT-CSEEEEECC-CHHHHHHHHHHHHHHH
T ss_pred -----CHHHHHHHH-HHCCEEEEECccCC-CCEEEEEcC-CHHHHHHHHHHHHHHh
Confidence 466776766 45699999999888 899999998 7889999999998875
No 54
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=100.00 E-value=7.2e-44 Score=340.03 Aligned_cols=368 Identities=17% Similarity=0.147 Sum_probs=284.4
Q ss_pred HhhccCccHHHHHHHHHhhhhccCCCCceeecCCCC-CCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHH
Q 014603 20 LKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDP-SAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIAD 98 (422)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~ 98 (422)
+...+++.+..+...+... ..+++|+|+.|.+ +.....+..+.+.+++.+.........|.+..|.+++|+++++
T Consensus 7 ~~~~~~~~i~~~~~~~~~~----~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~ 82 (401)
T 7aat_A 7 VEMGPPDPILGVTEAFKRD----TNSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFTRASAE 82 (401)
T ss_dssp CCCCCCCHHHHHHHHHHHC----CCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHH
T ss_pred CCCCCCChhHHHHHHHhhC----CCCCceeeeeeeEECCCCCEechHHHHHHHHHhcccccccCCCCCCCCHHHHHHHHH
Confidence 4556677787777666554 3566899999997 3212223456888988887764445689988899999999999
Q ss_pred HHhhcCCCCCCCCCEEE--ecCHHHHHHHHHHHhc---CCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCH
Q 014603 99 YLNRDLPYKLSPDDVYL--TLGCTQAIEVILTVLA---RPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDL 173 (422)
Q Consensus 99 ~l~~~~~~~~~~~~i~~--~~g~~~a~~~~~~~l~---~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~ 173 (422)
++.+.+|..+++++|++ |+|++++++.++.++. ++||+|++++|+|.++...++..|.+++.++.++.+++.+|+
T Consensus 83 ~~~~~~~~~~~~~~i~~v~t~G~~~al~~~~~~l~~~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~ 162 (401)
T 7aat_A 83 LALGENSEAFKSGRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSLDF 162 (401)
T ss_dssp HHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTHHHHHHHTTCEEEEEECEETTTTEECH
T ss_pred HhcCCCccccccCceEEEecCcchHHHHHHHHHHHHhccCCCEEEEcCCCchhHHHHHHHcCCeeEeeeeeccccCccCH
Confidence 99877766677899987 9999999999887664 899999999999999999999999999999986555678999
Q ss_pred HHHHHhhc---CCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCC--CCCCcccc-CCCCCe
Q 014603 174 DAVEALAD---ENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNT--PFVPMGVF-GSIVPV 247 (422)
Q Consensus 174 ~~l~~~~~---~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~--~~~~~~~~-~~~~~~ 247 (422)
+.+++.+. ++++++++++||||||.+++.+++++|+++|+++|+++|+||+|..+.+++. ...++..+ ...+++
T Consensus 163 ~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (401)
T 7aat_A 163 TGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGIDV 242 (401)
T ss_dssp HHHHHHHTTSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCC
T ss_pred HHHHHHHHhCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHHHHHHHHhcCCcE
Confidence 97776654 5678899999999999999999999999999999999999999998877542 11122211 234578
Q ss_pred EEEecCccccCCCCceeEEEEeeCCCCcccchh----HHHHHHhhhh-hccCcchHHHHHHHHHHhhch-----HHHHHH
Q 014603 248 LTLGSISKRWIVPGWRLGWLVTSDPNGILQDSG----IVDSIKSFLN-ISSDPATFIQGAVPQILEKTE-----EEFFSK 317 (422)
Q Consensus 248 i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~----~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~-----~~~~~~ 317 (422)
++++|+||.|+++|+|+||++++... ++ +...+..... .+.+++...+.++..++++.. ..++++
T Consensus 243 i~~~S~sK~~~~~G~RiG~l~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 317 (401)
T 7aat_A 243 VLSQSYAKNMGLYGERAGAFTVICRD-----AEEAKRVESQLKILIRPMYSNPPMNGARIASLILNTPELRKEWLVEVKG 317 (401)
T ss_dssp EEEEECTTTSCCGGGCEEEEEEECSS-----HHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred EEEecCCcccccccCceEEEEEEeCC-----HHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 99999999999999999999874221 23 3444444332 334666677777777776421 355778
Q ss_pred HHHHHHHHHHHHHHHhhcCC---CCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEE
Q 014603 318 ITDILRETADICCDRLKEIP---CITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLR 394 (422)
Q Consensus 318 ~~~~~~~~~~~l~~~L~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iR 394 (422)
.+++++++++.+.+.|+++. ++. +..|.+++|.|+.++ .+.+..+++++||.+.|+ +|
T Consensus 318 ~~~~~~~~r~~l~~~L~~~~~~~~~~-~~~~~~~~~~~~~~~----------~~~~~~ll~~~gi~v~~~--------~R 378 (401)
T 7aat_A 318 MADRIISMRTQLVSNLKKEGSSHNWQ-HITDQIGMFCFTGLK----------PEQVERLTKEFSIYMTKD--------GR 378 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCSCCH-HHHHCCSSEEECCCC----------HHHHHHHHHHHCEECCTT--------CE
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCc-eecCCcceEEecCCC----------HHHHHHHHHhCCEeccCC--------Ce
Confidence 88899999999999998872 354 336788999987653 334567778889999875 59
Q ss_pred EEec-cChHHHHHHHHHHHHHH
Q 014603 395 ITFA-VEPSALEDGLGRMKAFY 415 (422)
Q Consensus 395 is~~-~~~~~l~~~~~~l~~~~ 415 (422)
+|++ .+++++++++++|++++
T Consensus 379 is~~~~~~~~i~~~~~~l~~~~ 400 (401)
T 7aat_A 379 ISVAGVASSNVGYLAHAIHQVT 400 (401)
T ss_dssp EEGGGCCTTTHHHHHHHHHHHH
T ss_pred EEeccCChhhHHHHHHHHHHHh
Confidence 9998 66677999999999876
No 55
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=100.00 E-value=3.7e-43 Score=331.16 Aligned_cols=332 Identities=19% Similarity=0.298 Sum_probs=282.1
Q ss_pred CCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCC-CCCCEEEecCHHHH
Q 014603 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKL-SPDDVYLTLGCTQA 122 (422)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~-~~~~i~~~~g~~~a 122 (422)
++++|+|+.|.+. +++++.+.+++.+.+.......|+. .+..++|+++++++ ++ ++++|++|+|++++
T Consensus 29 ~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~y~~-~~~~~l~~~la~~~------g~~~~~~i~~~~g~t~a 97 (367)
T 3euc_A 29 SHGLVKLDAMENP----YRLPPALRSELAARLGEVALNRYPV-PSSEALRAKLKEVM------QVPAGMEVLLGNGSDEI 97 (367)
T ss_dssp CTTCEECCSSCCC----CCCCHHHHHHHHHHHHHHHTTCSCC-CCHHHHHHHHHHHH------TCCTTCEEEEEEHHHHH
T ss_pred CCCeeEccCCCCC----CCCCHHHHHHHHHHhhhhhhhcCCC-CcHHHHHHHHHHHh------CCCCcceEEEcCCHHHH
Confidence 5678999999844 6788999999999887533457866 47899999999999 44 67899999999999
Q ss_pred HHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC-CceEEEEeCCCCCcccccC
Q 014603 123 IEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE-NTVALVIINPGNPCGNVYT 201 (422)
Q Consensus 123 ~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~i~~p~nptG~~~~ 201 (422)
++.++++++++||+|+++.|+|+++...++..|.+++.++.++ ++.+|++.|++.+++ +++++++++|+||||.+++
T Consensus 98 ~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~ 175 (367)
T 3euc_A 98 ISMLALAAARPGAKVMAPVPGFVMYAMSAQFAGLEFVGVPLRA--DFTLDRGAMLAAMAEHQPAIVYLAYPNNPTGNLFD 175 (367)
T ss_dssp HHHHHHHTCCTTCEEEEEESCSCCSCHHHHTTTCEEEEEECCT--TSCCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCC
T ss_pred HHHHHHHHcCCCCEEEEcCCCHHHHHHHHHHcCCeEEEecCCC--CCCCCHHHHHHHhhccCCCEEEEcCCCCCCCCCCC
Confidence 9999999999999999999999999999999999999998864 567899999999887 8999999999999999999
Q ss_pred HHHHHHHHHHHHHc--CcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccch
Q 014603 202 YQHLQKIAETAKKL--GIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDS 279 (422)
Q Consensus 202 ~~~l~~i~~~~~~~--~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~ 279 (422)
.+++++|+++|++| |+++|+|++|+.+...+ . ...++..++++++.|+||. +++|+|+||++++ +
T Consensus 176 ~~~l~~i~~~~~~~~~~~~li~De~~~~~~~~~--~--~~~~~~~~~~i~~~s~sK~-~~~G~r~G~~~~~--------~ 242 (367)
T 3euc_A 176 AADMEAIVRAAQGSVCRSLVVVDEAYQPFAQES--W--MSRLTDFGNLLVMRTVSKL-GLAGIRLGYVAGD--------P 242 (367)
T ss_dssp HHHHHHHHHHTBTTSCBCEEEEECTTCCSSSCC--S--GGGGGTCTTEEEEEECCCT-TSCSCCEEEEEEC--------H
T ss_pred HHHHHHHHHhhhhcCCCcEEEEeCcchhhcccc--h--HHHHhhCCCEEEEecchhh-cccccCceeeeeC--------H
Confidence 99999999999999 99999999999865332 1 2233444678999999999 9999999999985 5
Q ss_pred hHHHHHHhhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCccc
Q 014603 280 GIVDSIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSL 359 (422)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~ 359 (422)
++.+.+...... .+++.+.+.++..+|+. ..++++.+++++++++.+.+.|+++|++. . .|..+.|+|+.++
T Consensus 243 ~~~~~~~~~~~~-~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~~g~~-~-~~~~~~~~~~~~~--- 314 (367)
T 3euc_A 243 QWLEQLDKVRPP-YNVNVLTEATALFALEH--VAVLDEQAAQLRAERSRVAEGMAAHGGVT-V-FPSAANFLLARVP--- 314 (367)
T ss_dssp HHHHHHGGGCCS-SCCCHHHHHHHHHHHTT--HHHHHHHHHHHHHHHHHHHHHHHTSTTCE-E-CCCSSSEEEEECS---
T ss_pred HHHHHHHHhCCC-CCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHhCCCcE-E-CCCCCeEEEEECC---
Confidence 677877665543 46788999999999986 67789999999999999999999998887 4 5667889998886
Q ss_pred ccCCCCHHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEeccChHHHHHHHHHHHHHHH
Q 014603 360 LEGINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAVEPSALEDGLGRMKAFYD 416 (422)
Q Consensus 360 ~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRis~~~~~~~l~~~~~~l~~~~~ 416 (422)
+..++...+ .++||.+.+|..|+. .+++||+++ +++++++++++|+++++
T Consensus 315 -----~~~~l~~~l-~~~gi~v~~~~~~~~~~~~~iRis~~-~~~~i~~~~~~l~~~l~ 366 (367)
T 3euc_A 315 -----DAAQTFDRL-LARKVLIKNVSKMHPLLANCLRVTVS-TPEENAQFLEAFAASLQ 366 (367)
T ss_dssp -----CHHHHHHHH-HTTTEECEECGGGCGGGTTEEEEECC-CHHHHHHHHHHHHHHTC
T ss_pred -----CHHHHHHHH-HHCCeEEEECCccCCCCCCEEEEecC-CHHHHHHHHHHHHHHhc
Confidence 356666665 677999999987753 689999998 78899999999988763
No 56
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=100.00 E-value=6.5e-44 Score=341.57 Aligned_cols=372 Identities=16% Similarity=0.159 Sum_probs=292.7
Q ss_pred HHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCC-CCCCCCCCcHHHHHHHHHHhhC-CCCCCCCCCCCCHHHHHHH
Q 014603 19 ELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDP-SAFPSFRTASVAVDAIVHSVRS-ARFNCYSSTVGILPARRAI 96 (422)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~v~~a~~~~~~~-~~~~~y~~~~g~~~lr~~i 96 (422)
++...+++.++.+.+...+. +++++|||+.|.+ +.....++++.+.+++.+.+.. .....|.+..+.+++|+++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~----~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~l 83 (412)
T 1ajs_A 8 EVPQAQPVLVFKLIADFRED----PDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHEYLPILGLAEFRTCA 83 (412)
T ss_dssp TCCCCCCCHHHHHHHHHHTC----CCTTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHH
T ss_pred hCcccCCchHHHHHHHHhhc----CCCCceeeccceecCCCCCccccHHHHHHHHHhhhChhhccCCCCCCCCHHHHHHH
Confidence 67778888899988766543 4688999999986 3222235678999999988733 2345788888999999999
Q ss_pred HHHHhhcCCCCCCCCCEEE--ecCHHHHHHHHHH--HhcCCC-----CEEEecCCCccchHHHHhhCCCe-EEEeeccCC
Q 014603 97 ADYLNRDLPYKLSPDDVYL--TLGCTQAIEVILT--VLARPG-----ANILLPRPGFPYYEARATHSHLE-VRHFDLLPA 166 (422)
Q Consensus 97 a~~l~~~~~~~~~~~~i~~--~~g~~~a~~~~~~--~l~~~g-----d~Vl~~~~~~~~~~~~~~~~g~~-~~~~~~~~~ 166 (422)
++++...++..+++++|++ |+|+++|++.+++ .++.+| |+|+++.|+|+++...++..|.+ ++.++..++
T Consensus 84 a~~~~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~ 163 (412)
T 1ajs_A 84 SRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDT 163 (412)
T ss_dssp HHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHHHHHHTTCSCEEEEECEET
T ss_pred HHHHhcCCCCccCCCcEEEEECCCcHHHHHHHHHHHHHhCcCcCCCCCeEEEcCCCcHHHHHHHHHcCCceeEEEeeecC
Confidence 9999654444457789999 9999999999964 446789 99999999999999999999999 999987544
Q ss_pred CCcccCHHHHHHhhcC---CceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCC--CCCCCcccc
Q 014603 167 KGWEVDLDAVEALADE---NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGN--TPFVPMGVF 241 (422)
Q Consensus 167 ~~~~~d~~~l~~~~~~---~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~--~~~~~~~~~ 241 (422)
+++.+|++.+++.+++ +++++++++|+||||.+++.+++++|+++|+++|+++|+||+|..+.+++ ....++..+
T Consensus 164 ~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~ 243 (412)
T 1ajs_A 164 EKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYF 243 (412)
T ss_dssp TTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHH
T ss_pred CCCccCHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccCCcccccchHHHHH
Confidence 5678999999988764 56777889999999999999999999999999999999999999887754 122233323
Q ss_pred C-CCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchh----HHHHHHhhh-hhccCcchHHHHHHHHHHhhch----
Q 014603 242 G-SIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSG----IVDSIKSFL-NISSDPATFIQGAVPQILEKTE---- 311 (422)
Q Consensus 242 ~-~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~----~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~---- 311 (422)
. ..++++++.|+||.|+++|+|+||++++.+. ++ +++.+.... ..+.+++.+.+.++.++|+...
T Consensus 244 ~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~ 318 (412)
T 1ajs_A 244 VSEGFELFCAQSFSKNFGLYNERVGNLTVVAKE-----PDSILRVLSQMQKIVRVTWSNPPAQGARIVARTLSDPELFHE 318 (412)
T ss_dssp HHTTCCEEEEEECTTTSCCGGGCEEEEEEECSS-----HHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHSHHHHHH
T ss_pred hccCCcEEEEEecccccCCCCcceEEEEEecCC-----HHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHcCcchhHH
Confidence 2 2356899999999998899999999982000 34 444454433 2334568899999999998642
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHhhcCC---CCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCC
Q 014603 312 -EEFFSKITDILRETADICCDRLKEIP---CITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITV 387 (422)
Q Consensus 312 -~~~~~~~~~~~~~~~~~l~~~L~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~ 387 (422)
+.++++.+++++++++.+.+.|++++ ++. +..|.+|+|+|+.++ .+++..+++++||.+.|+
T Consensus 319 ~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~~~~~~~~~~----------~~~~~~~l~~~gv~v~~~--- 384 (412)
T 1ajs_A 319 WTGNVKTMADRILSMRSELRARLEALKTPGTWN-HITDQIGMFSFTGLN----------PKQVEYLINQKHIYLLPS--- 384 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCH-HHHHCCSSEEECCCC----------HHHHHHHHHTTCEECCTT---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCee-EEcCCCceEEEeCCC----------HHHHHHHHHhCCEEecCC---
Confidence 35788889999999999999999874 355 336778899887552 345566777889999875
Q ss_pred CCCCeEEEEec-cChHHHHHHHHHHHHHHHHh
Q 014603 388 GLKDWLRITFA-VEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 388 ~~~~~iRis~~-~~~~~l~~~~~~l~~~~~~~ 418 (422)
+||+++ .+++++++++++|+++++++
T Consensus 385 -----~Ris~~~~~~~~i~~~~~~l~~~l~~~ 411 (412)
T 1ajs_A 385 -----GRINMCGLTTKNLDYVATSIHEAVTKI 411 (412)
T ss_dssp -----SEEEGGGCCTTTHHHHHHHHHHHHHHC
T ss_pred -----cEEEeeeCCHHHHHHHHHHHHHHHHhc
Confidence 599999 58999999999999998763
No 57
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=100.00 E-value=1.5e-43 Score=338.92 Aligned_cols=372 Identities=15% Similarity=0.138 Sum_probs=289.9
Q ss_pred cHHHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCC-CCCCCCCCcHHHHHHHHH-HhhCCCCCCCCCCCCCHHHHH
Q 014603 17 NEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDP-SAFPSFRTASVAVDAIVH-SVRSARFNCYSSTVGILPARR 94 (422)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~v~~a~~~-~~~~~~~~~y~~~~g~~~lr~ 94 (422)
.+++...+++.++.+...+.+. +++++|||+.|.+ +.....++++.+.+++.+ .+.......|.+..|.+++|+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~ 80 (412)
T 1yaa_A 5 FNNIELLPPDALFGIKQRYGQD----QRATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLGITGLPSLTS 80 (412)
T ss_dssp TTTCCCCCCCTTHHHHHHHHTC----CCSSCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHH
T ss_pred hccCcccCCCcHHHHHHHHhcC----CCCCeEEEeeeeeeCCCCCCCCcHHHHHHHHhhhcCcccccCCCCCCCcHHHHH
Confidence 4567778888888888766544 4678999999986 211223567899999999 876444557888889999999
Q ss_pred HHHHHHhhcCCCCCCCCCEEE--ecCHHHHHHHHH--HHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcc
Q 014603 95 AIADYLNRDLPYKLSPDDVYL--TLGCTQAIEVIL--TVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWE 170 (422)
Q Consensus 95 ~ia~~l~~~~~~~~~~~~i~~--~~g~~~a~~~~~--~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 170 (422)
++++++...+|..+++++|++ |+|+++|+++++ ..++.+||+|+++.|+|+++...++..|.+++.++....+++.
T Consensus 81 ~ia~~~~~~~~~~~~~~~i~~~~t~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ 160 (412)
T 1yaa_A 81 NAAKIIFGTQSDALQEDRVISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMAIFENQGLKTATYPYWANETKS 160 (412)
T ss_dssp HHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCTTHHHHHHTTTCCEEEEECEETTTTE
T ss_pred HHHHHHhcCCCCCCCcceEEEEeccchHhHHHHHHHHHHHhCCCCEEEEeCCCCccHHHHHHHcCceEEEEeeecCCCCc
Confidence 999999765554456889999 999999999984 3445699999999999999999999999999999873223578
Q ss_pred cCHHHHHHhhcCC---ceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCC--CCCCCccccC-CC
Q 014603 171 VDLDAVEALADEN---TVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGN--TPFVPMGVFG-SI 244 (422)
Q Consensus 171 ~d~~~l~~~~~~~---~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~--~~~~~~~~~~-~~ 244 (422)
+|++.|++.++++ +.++++++|+||||.+++.+++++|+++|+++|+++|+||+|..+.+++ ....++..+. ..
T Consensus 161 ~d~~~l~~~l~~~~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~ 240 (412)
T 1yaa_A 161 LDLNGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKL 240 (412)
T ss_dssp ECHHHHHHHHHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHT
T ss_pred cCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhHHHHHHHhcC
Confidence 9999999887643 4455559999999999999999999999999999999999999887654 1111222221 12
Q ss_pred C---CeEEEecCccccCCCCceeEEEE--e----eCCCCcccchh----HHHHHHhhh-hhccCcchHHHHHHHHHHhhc
Q 014603 245 V---PVLTLGSISKRWIVPGWRLGWLV--T----SDPNGILQDSG----IVDSIKSFL-NISSDPATFIQGAVPQILEKT 310 (422)
Q Consensus 245 ~---~~i~i~s~sK~~~~~G~r~G~~~--~----~~~~~~~~~~~----~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~ 310 (422)
+ ++++++|+||.|+++|+|+||++ + .+ ++ +++++.... ..+.+++.+.+.++.++|+..
T Consensus 241 ~~~~~~i~~~s~sK~~~~~GlriG~~~~~~~~~~~~-------~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~ 313 (412)
T 1yaa_A 241 STVSPVFVCQSFAKNAGMYGERVGCFHLALTKQAQN-------KTIKPAVTSQLAKIIRSEVSNPPAYGAKIVAKLLETP 313 (412)
T ss_dssp TTTCCEEEEEECTTTSCCGGGCEEEEEEECCSCTTH-------HHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSH
T ss_pred CCCcceEEEeccCCCCCCcCCcceEEEEEecCCCCC-------HHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHhCCH
Confidence 3 68999999999988899999998 6 12 34 667766633 334466889999999999864
Q ss_pred h-----HHHHHHHHHHHHHHHHHHHHHhhcCC---CCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEe
Q 014603 311 E-----EEFFSKITDILRETADICCDRLKEIP---CITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVL 382 (422)
Q Consensus 311 ~-----~~~~~~~~~~~~~~~~~l~~~L~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~ 382 (422)
. +.++++.+++++++++.+.+.|++++ ++. +..|.+|+++|+.++ ... +..+++++||.+.
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~~~~~~~~~~---------~~~-~~~~l~~~gi~v~ 382 (412)
T 1yaa_A 314 ELTEQWHKDMVTMSSRITKMRHALRDHLVKLGTPGNWD-HIVNQCGMFSFTGLT---------PQM-VKRLEETHAVYLV 382 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCT-HHHHCCSSEEECCCC---------HHH-HHHHHHHHCEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCee-eeccCceEEEeeCCC---------HHH-HHHHHHhCCEEec
Confidence 2 35788889999999999999999874 366 346778888887552 333 4667777899998
Q ss_pred cCCCCCCCCeEEEEec-cChHHHHHHHHHHHHHHHHh
Q 014603 383 PGITVGLKDWLRITFA-VEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 383 ~g~~~~~~~~iRis~~-~~~~~l~~~~~~l~~~~~~~ 418 (422)
+ ++||+++ .+++++++++++|+++++.+
T Consensus 383 ~--------~~Ris~~~~~~~~i~~~~~~l~~~~~~~ 411 (412)
T 1yaa_A 383 A--------SGRASIAGLNQGNVEYVAKAIDEVVRFY 411 (412)
T ss_dssp T--------TSEEEGGGCCTTTHHHHHHHHHHHHHHC
T ss_pred c--------CcEEEEccCCHhHHHHHHHHHHHHHHhh
Confidence 7 4699998 48999999999999988753
No 58
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=100.00 E-value=1.4e-42 Score=335.61 Aligned_cols=384 Identities=19% Similarity=0.303 Sum_probs=292.1
Q ss_pred ccccHHHhhccC-ccHHHHHHHHHhhhhccCCCCce-eecCCCCCCCCCCCC--cHHHHHHHHHHhhC-------CC---
Q 014603 14 FKANEELKTASG-ITVRGVLNSLLENLNKNDTRPLI-PLGHGDPSAFPSFRT--ASVAVDAIVHSVRS-------AR--- 79 (422)
Q Consensus 14 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i-~l~~g~~~~~~~~~~--~~~v~~a~~~~~~~-------~~--- 79 (422)
+++|.+.+++.. +.++.++..+.+.. ..+++| +|++|.|.. ++ .+.+.+++.+.+.+ ..
T Consensus 2 ~~~s~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~~l~~g~p~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (444)
T 3if2_A 2 MKFSKFGQKFTQPTGISQLMDDLGDAL---KSDQPVNMLGGGNPAK----IDAVNELFLETYKALGNDNDTGKANSSAII 74 (444)
T ss_dssp CCCCHHHHHHHSCCHHHHHHHHHHHHH---HSSSCCEECSCCCCCC----CHHHHHHHHHHHHHHHSCSCTTCCCCHHHH
T ss_pred CCcchhhhhccCchhHHHHHHHHHhhh---cCchhhhccCCCCCCc----ccchHHHHHHHHHHHHhccccccccchhhh
Confidence 455656655544 56888887666554 347899 999998762 22 25566666666554 21
Q ss_pred -CCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCC--------------EEEec-CCC
Q 014603 80 -FNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGA--------------NILLP-RPG 143 (422)
Q Consensus 80 -~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd--------------~Vl~~-~~~ 143 (422)
...|.+..|.+++|+++++++.+.+|+++++++|++|+|+++|++.++++++++|| +|+++ .|+
T Consensus 75 ~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~~~gd~~~~~~~~~~g~~~~vi~~~~p~ 154 (444)
T 3if2_A 75 SMANYSNPQGDSAFIDALVGFFNRHYDWNLTSENIALTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSILLPLTPE 154 (444)
T ss_dssp HHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHSSEEEECC-------CEEEEEEEESSSSC
T ss_pred hhhccCCCCCCHHHHHHHHHHHHhhcCCCCCHHHEEEecCcHHHHHHHHHHHhCCCccccccccccccccceEEEeCCCC
Confidence 24688888999999999999998888889999999999999999999999998888 78775 999
Q ss_pred ccchHHH------HhhCCCeEEEeeccCCC---CcccCHHHHHHh---hcCCceEEEEeCCCCCcccccCHHHHHHHHHH
Q 014603 144 FPYYEAR------ATHSHLEVRHFDLLPAK---GWEVDLDAVEAL---ADENTVALVIINPGNPCGNVYTYQHLQKIAET 211 (422)
Q Consensus 144 ~~~~~~~------~~~~g~~~~~~~~~~~~---~~~~d~~~l~~~---~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~ 211 (422)
|+.+... ....+..++.++.+.++ ++.+|++.|++. +.++++++++++|+||||.++|.+++++|+++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~ 234 (444)
T 3if2_A 155 YIGYSDVHVEGQHFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALKEGRIGAICCSRPTNPTGNVLTDEEMAHLAEI 234 (444)
T ss_dssp CGGGTTCCSSSCCEEECCCEEEEEEETTEEEEEEEECCHHHHHTCHHHHTTCEEEEEEESSCTTTCCCCCHHHHHHHHHH
T ss_pred ccchhhcccccchhhccCceEEecccccccCccccCCCHHHHHHHHHhcCCCceEEEeCCCCCCCCCcCCHHHHHHHHHH
Confidence 9988653 33456677777765322 357899999987 67789999999999999999999999999999
Q ss_pred HHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhh-
Q 014603 212 AKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN- 290 (422)
Q Consensus 212 ~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~- 290 (422)
|+++|+++|+||+|+.+.. +....... ....++++++.|+||+ +++|+|+||++++ +++.+.+.....
T Consensus 235 a~~~~~~li~De~~~~~~~-~~~~~~~~-~~~~~~~i~~~S~sK~-~~~G~r~G~~~~~--------~~l~~~~~~~~~~ 303 (444)
T 3if2_A 235 AKRYDIPLIIDNAYGMPFP-NIIYSDAH-LNWDNNTILCFSLSKI-GLPGMRTGIIVAD--------AKVIEAVSAMNAV 303 (444)
T ss_dssp HHHTTCCEEEECTTCTTTT-CCBCSCCC-CCCCTTEEEEEESTTT-TCGGGCCEEEECC--------HHHHHHHHHHHHH
T ss_pred HHHCCCEEEEECCCCCccc-cccccccc-ccCCCCEEEEechhhc-cCCCCceEEEEEC--------HHHHHHHHHHHHh
Confidence 9999999999999975321 11111111 1223568999999997 8999999999985 568888876654
Q ss_pred hccCcchHHHHHHHHHHhhch-HHHHHH-HHHHHHHHHHHHHHHhhc-CCC--CCCCCCCCCceEEEEecCcccccCCCC
Q 014603 291 ISSDPATFIQGAVPQILEKTE-EEFFSK-ITDILRETADICCDRLKE-IPC--ITCPKKPEGSMFVMVKLNYSLLEGINS 365 (422)
Q Consensus 291 ~~~~~~~~~~~a~~~~l~~~~-~~~~~~-~~~~~~~~~~~l~~~L~~-~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~ 365 (422)
...+++++.+.++..+++... .....+ .++.++++++.+.+.|++ +++ +. +..|.+++++|+.++... .+
T Consensus 304 ~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~g~~~~~~~~~~~----~~ 378 (444)
T 3if2_A 304 VNLAPTRFGAAIATPLVANDRIKQLSDNEIKPFYQKQATLAVKLLKQALGDYPLM-IHKPEGAIFLWLWFKDLP----IS 378 (444)
T ss_dssp HHSSCCCHHHHHHHHHHHTSHHHHHHHHTHHHHHHHHHHHHHHHHHHHSSSSSEE-EECCCBSSEEEEEETTCS----SC
T ss_pred ccCCCChHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCCce-EecCCccEEEEEEcCCCC----CC
Confidence 345778899999999888643 233333 667788888888888776 454 34 336788999999887411 25
Q ss_pred HHHHHHHHHHhcCeEEecCCCCCC----------CCeEEEEeccChHHHHHHHHHHHHHHHHhccc
Q 014603 366 DMEFALKLAKEESVIVLPGITVGL----------KDWLRITFAVEPSALEDGLGRMKAFYDRHAKK 421 (422)
Q Consensus 366 ~~~~~~~l~~~~gi~v~~g~~~~~----------~~~iRis~~~~~~~l~~~~~~l~~~~~~~~~~ 421 (422)
..++...+ .++||.+.||..|.. .+++||+++.++++|++++++|.++++++.+.
T Consensus 379 ~~~l~~~l-~~~gi~v~~g~~~~~~~~~~~~~~~~~~iRis~~~~~e~i~~~l~~l~~~~~~~~~~ 443 (444)
T 3if2_A 379 TLDLYERL-KAKGTLIVPSEYFFPGVDVSDYQHAHECIRMSIAADEQTLIDGIKVIGEVVRELYDN 443 (444)
T ss_dssp HHHHHHHH-HHTTEECEEGGGSCTTCCCTTCSGGGSEEEEESSSCHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHH-HHCCeEEecchhhcCCCCCcccccCCCeEEEEEeCCHHHHHHHHHHHHHHHHHHHcc
Confidence 66776665 677999999998854 26899999989999999999999999887643
No 59
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=100.00 E-value=1.1e-42 Score=328.83 Aligned_cols=326 Identities=22% Similarity=0.371 Sum_probs=275.6
Q ss_pred HHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHH
Q 014603 70 AIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEA 149 (422)
Q Consensus 70 a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~ 149 (422)
++.+.+... ...|++..|.+++|+++++++. ++++++|++|+|+++|+..++++++++||+|+++.|+|+++..
T Consensus 47 ~~~~~~~~~-~~~y~~~~g~~~l~~~la~~~~-----~~~~~~v~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~ 120 (375)
T 3op7_A 47 DFYKKLQGT-KLNYGWIEGSPAFKKSVSQLYT-----GVKPEQILQTNGATGANLLVLYSLIEPGDHVISLYPTYQQLYD 120 (375)
T ss_dssp HHHHHHHTS-CCSSCCTTCCHHHHHHHHTTSS-----SCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESSCTHHHH
T ss_pred HHHHHHhcC-CcCCCCCCChHHHHHHHHHHhc-----cCChhhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHH
Confidence 444444443 3478888899999999999873 3578899999999999999999999999999999999999999
Q ss_pred HHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccc
Q 014603 150 RATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLA 229 (422)
Q Consensus 150 ~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~ 229 (422)
.+...|.+++.+++++++++.+|++.|++.++++++++++++|+||||.+++.+++++|+++|++||+++|+||+|+.+.
T Consensus 121 ~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~~~ 200 (375)
T 3op7_A 121 IPKSLGAEVDLWQIEEENGWLPDLEKLRQLIRPTTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSFS 200 (375)
T ss_dssp HHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCTTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCCCS
T ss_pred HHHHcCCEEEEEeccccCCCCCCHHHHHHhhccCCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccc
Confidence 99999999999998766678899999999998899999999999999999999999999999999999999999999877
Q ss_pred cCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhhh-ccCcchHHHHHHHHHHh
Q 014603 230 FGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQGAVPQILE 308 (422)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~ 308 (422)
+++ ...+. +..++++++.|+||.++++|+|+||++++ +++++.+...... ..+++++.+.++..+++
T Consensus 201 ~~~--~~~~~--~~~~~~i~~~s~sK~~~~~G~r~G~v~~~--------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 268 (375)
T 3op7_A 201 ELD--VPSII--EVYDKGIAVNSLSKTYSLPGIRIGWVAAN--------HQVTDILRDYRDYTMICAGVFDDLVAQLALA 268 (375)
T ss_dssp SSC--CCCHH--HHCTTEEEEEESSSSSSCGGGCCEEEECC--------HHHHHHHTTTGGGTTSCCCHHHHHHHHHHHH
T ss_pred ccC--CCchh--hhcCCEEEEeEChhhcCCcccceEEEEeC--------HHHHHHHHHHHhhhccCCCcHHHHHHHHHHh
Confidence 652 22222 22356799999999998899999999985 5788888776643 44667888888888887
Q ss_pred hchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCC
Q 014603 309 KTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVG 388 (422)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~ 388 (422)
. .+.++++.++.++++++.+.+.|++++++. +..|.++++.|+.++.. .+..+++..+++++||.+.||..|+
T Consensus 269 ~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~-----~~~~~~~~~ll~~~gi~v~~g~~~~ 341 (375)
T 3op7_A 269 H-YQEILERNRHILEENLAILDQWIEEEPLVS-YIRPAVVSTSFVKIAVD-----MPMEDFCLQLLQEHGVLLVPGNRFE 341 (375)
T ss_dssp T-HHHHHHHHHHHHHHHHHHHHHHHHHCTTEE-ECCCSSSSCEEEEECCS-----SCHHHHHHHHHHHHCEECEEGGGGT
T ss_pred c-cHHHHHHHHHHHHHHHHHHHHHHhhCCCce-EecCCCeEEEeEEcCCC-----CCHHHHHHHHHHhCCEEEeChhhhC
Confidence 4 456788888899999999999999988887 44788888888887642 2567788888778899999999988
Q ss_pred CCCeEEEEeccChHHHHHHHHHHHHHHHHhcc
Q 014603 389 LKDWLRITFAVEPSALEDGLGRMKAFYDRHAK 420 (422)
Q Consensus 389 ~~~~iRis~~~~~~~l~~~~~~l~~~~~~~~~ 420 (422)
..+++|++++.+.+++++++++|.++++++.+
T Consensus 342 ~~~~iRi~~~~~~~~i~~~l~~l~~~l~~~~~ 373 (375)
T 3op7_A 342 RDGYVRLGFACEQETLIKGLEKLSQFLRRFDK 373 (375)
T ss_dssp CTTEEEECCCSCHHHHHHHHHHHHHHHGGGC-
T ss_pred CCCeEEEEecCCHHHHHHHHHHHHHHHHHHhh
Confidence 88999999998779999999999999988754
No 60
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=100.00 E-value=2.2e-42 Score=324.15 Aligned_cols=322 Identities=18% Similarity=0.306 Sum_probs=264.0
Q ss_pred CCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHH
Q 014603 45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIE 124 (422)
Q Consensus 45 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~ 124 (422)
.++|||+.|.+. +++++.+ + + ...+.|++. +.+++|+++++++ ++++++|++|+|++++++
T Consensus 29 ~~~i~l~~~~~~----~~~~~~v--a----~--~~~~~Y~~~-~~~~lr~~la~~~------~~~~~~v~~~~G~~~ai~ 89 (356)
T 1fg7_A 29 NGDVWLNANEYP----TAVEFQL--T----Q--QTLNRYPEC-QPKAVIENYAQYA------GVKPEQVLVSRGADEGIE 89 (356)
T ss_dssp TCSEECSSCCCS----SCCCCCC--C----C--CCTTSCCCS-SCHHHHHHHHHHH------TSCGGGEEEESHHHHHHH
T ss_pred CceEEeeCCCCC----CCCCHhH--h----h--hhhccCCCc-cHHHHHHHHHHHh------CCChHHEEEcCCHHHHHH
Confidence 468999999854 4555555 1 2 134688775 4899999999999 567889999999999999
Q ss_pred HHHHHhcCCC-CEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHH
Q 014603 125 VILTVLARPG-ANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQ 203 (422)
Q Consensus 125 ~~~~~l~~~g-d~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~ 203 (422)
.++++++++| |+|+++.|+|+++...++..|.+++.++.+ +++.+|++.+++.++ +++++++++|+||||.++|.+
T Consensus 90 ~~~~~~~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~-~~~~v~l~~p~nptG~~~~~~ 166 (356)
T 1fg7_A 90 LLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVECRTVPTL--DNWQLDLQGISDKLD-GVKVVYVCSPNNPTGQLINPQ 166 (356)
T ss_dssp HHHHHHCCTTTCEEEECSSSCTHHHHHHHHHTCEEEECCCC--TTSCCCHHHHHTSCT-TEEEEEEESSCTTTCCCCCHH
T ss_pred HHHHHHhCCCCCEEEEeCCChHHHHHHHHHcCCEEEEeeCC--CCCCCCHHHHHHHhc-CCCEEEEeCCCCCCCCCCCHH
Confidence 9999999999 999999999999999999999999888875 356789999999887 889999999999999999999
Q ss_pred HHHHHHHHHHHcCcEEEEcccccccccCCCCCCCcccc-CCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHH
Q 014603 204 HLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF-GSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIV 282 (422)
Q Consensus 204 ~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~-~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 282 (422)
++++|+++|+ +|+++|+||+|..+.. + .++..+ +..++++++.|+||.|+++|+|+||++++ ++++
T Consensus 167 ~l~~l~~~~~-~~~~li~De~~~~~~~-~---~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~--------~~~~ 233 (356)
T 1fg7_A 167 DFRTLLELTR-GKAIVVADEAYIEFCP-Q---ASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLAN--------EEVI 233 (356)
T ss_dssp HHHHHHHHHT-TTCEEEEECTTGGGSG-G---GCSGGGTTTCTTEEEEEESSSTTCCGGGCCEEEEEC--------HHHH
T ss_pred HHHHHHHhCC-CCCEEEEEccchhhcC-C---CcHHHHHhhCCCEEEEecchHhhcCchhhhEEEEeC--------HHHH
Confidence 9999999999 9999999999997652 1 122222 33456899999999998999999999985 5778
Q ss_pred HHHHhhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccccC
Q 014603 283 DSIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEG 362 (422)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 362 (422)
+.+......+ +++.+.|.++.++|+.....++++.+++++++++.+.+.|++++++. ...|..++|+|++++
T Consensus 234 ~~l~~~~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~~~~~~~~~~~------ 305 (356)
T 1fg7_A 234 NLLMKVIAPY-PLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIPCVE-QVFDSETNYILARFK------ 305 (356)
T ss_dssp HHHHHHSCSS-CSCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEE-EECCCSSSEEEEEET------
T ss_pred HHHHHhcCCC-CCCHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHhCCCce-EECCCCCeEEEEECC------
Confidence 8777655433 67889999999999763223488889999999999999999986543 225677889999885
Q ss_pred CCCHHHHHHHHHHhcCeEEec-CCCCCCCCeEEEEeccChHHHHHHHHHHHH
Q 014603 363 INSDMEFALKLAKEESVIVLP-GITVGLKDWLRITFAVEPSALEDGLGRMKA 413 (422)
Q Consensus 363 ~~~~~~~~~~l~~~~gi~v~~-g~~~~~~~~iRis~~~~~~~l~~~~~~l~~ 413 (422)
+..++...+ .++||.+.+ |..|+..+++||++++ ++++++++++|++
T Consensus 306 --~~~~l~~~L-~~~gI~v~~~g~~~~~~~~iRis~~~-~~e~~~~~~~l~~ 353 (356)
T 1fg7_A 306 --ASSAVFKSL-WDQGIILRDQNKQPSLSGCLRITVGT-REESQRVIDALRA 353 (356)
T ss_dssp --THHHHHHHH-HHTTEECEECTTSTTCTTEEEEECCC-HHHHHHHHHHHHT
T ss_pred --CHHHHHHHH-HHCCEEEEECCCCCCCCCeEEEEeCC-HHHHHHHHHHHHh
Confidence 356677766 677999999 8888877899999984 6899999988865
No 61
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=100.00 E-value=2.4e-42 Score=333.60 Aligned_cols=375 Identities=15% Similarity=0.122 Sum_probs=288.7
Q ss_pred cHHHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCCC-CCCCCcHHHHHHHHHHh--hCCCCCCCCCCCCCHHHH
Q 014603 17 NEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAF-PSFRTASVAVDAIVHSV--RSARFNCYSSTVGILPAR 93 (422)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~-~~~~~~~~v~~a~~~~~--~~~~~~~y~~~~g~~~lr 93 (422)
..++...+++.|..+...+.+. ..+.+|||+.|.+.+. ...+..+.+.+++.+.. .......|.+..|.+++|
T Consensus 25 ~~~~~~~~~~~i~~~~~~~~~~----~~~~~i~l~~g~~~d~~~~~~v~~av~~a~~~~~~~~~~~~~~Y~~~~G~~~lr 100 (448)
T 3meb_A 25 FSGFPASPPDAILNLTVLYNAD----TNPKKVNLGVGAYRDESGKPWILPAVKEAEAIISSDLSKYNKEYPPVAGFPLFL 100 (448)
T ss_dssp TTTCCCCCCCTTHHHHHHHHHC----CCTTCEEESSCCCCCTTSCCCCCHHHHHHHHHHHHCTTTTCCSCCCTTCCHHHH
T ss_pred HhcCCCCCCChHHHHHHHHHhC----CCCCeEEeecccccCCCCCEechHHHHHHHHHHhhcccCCCCCCCCCcchHHHH
Confidence 3467778888899988777654 3455799999997332 22345678888866655 223455898889999999
Q ss_pred HHHHHHHhhcCCCC---CCCCCEEE--ecCHHHHHHH--HHHHhcCCCCEEEecCCCccchHHHHh----hCCCeEEEee
Q 014603 94 RAIADYLNRDLPYK---LSPDDVYL--TLGCTQAIEV--ILTVLARPGANILLPRPGFPYYEARAT----HSHLEVRHFD 162 (422)
Q Consensus 94 ~~ia~~l~~~~~~~---~~~~~i~~--~~g~~~a~~~--~~~~l~~~gd~Vl~~~~~~~~~~~~~~----~~g~~~~~~~ 162 (422)
+++++++. |.. +++++|++ |+|+++|++. .+.+++.+||+|++++|+|.++...++ ..|.+++.++
T Consensus 101 ~~ia~~l~---g~~~~~~~~~~i~~~~t~ggt~al~l~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~~~~~G~~v~~~~ 177 (448)
T 3meb_A 101 EAAQFLMF---GKDSKAAQEGRIASCQSLSGTGSLHIGFEFLHLWMPKAEFYMPSTTWPNHYGIYDKVFNKLKVPYKEYT 177 (448)
T ss_dssp HHHHHHHH---CTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCTHHHHHHHHHHCTTTSCCEEEC
T ss_pred HHHHHHhc---CCCccccCcCcEEEEECCcHHHHHHHHHHHHHHhCCCCEEEECCCCCHhHHHHHHhhHHhCCCeEEEEe
Confidence 99999983 212 12689999 9999999988 455677899999999999999999999 8999999999
Q ss_pred ccCCC-CcccCHHHHHHhhc---CCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCC--CCC
Q 014603 163 LLPAK-GWEVDLDAVEALAD---ENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNT--PFV 236 (422)
Q Consensus 163 ~~~~~-~~~~d~~~l~~~~~---~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~--~~~ 236 (422)
..+.+ ++.+|++.+++.++ ++++++++++|+||||.+++.+++++|+++|+++|+++|+||+|..+.+++. ...
T Consensus 178 ~~~~~~~~~~d~e~l~~~l~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~~~~~~~ 257 (448)
T 3meb_A 178 YLRKDGELEIDFSNTKKDIQSAPEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFEADAF 257 (448)
T ss_dssp CBCTTSCSSBCHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSCHHHHTH
T ss_pred ccccccCCCcCHHHHHHHHHhCCCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEecccccccCCCcccCch
Confidence 84444 67899999999886 3577888899999999999999999999999999999999999998877541 111
Q ss_pred Ccccc-CCCCCeEEEecCccccCCCCceeEEE--Ee--------eCCCCcccchhHHHHHHhhh-hhccCcchHHHHHHH
Q 014603 237 PMGVF-GSIVPVLTLGSISKRWIVPGWRLGWL--VT--------SDPNGILQDSGIVDSIKSFL-NISSDPATFIQGAVP 304 (422)
Q Consensus 237 ~~~~~-~~~~~~i~i~s~sK~~~~~G~r~G~~--~~--------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~ 304 (422)
.+..+ ...++++++.|+||.|+++|+|+||+ ++ +++. . .+++.+.+.... ..+.+++.+.+.++.
T Consensus 258 ~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~~~~-~--~~~l~~~l~~~~~~~~~~~~~~~~~a~~ 334 (448)
T 3meb_A 258 AVRMFVDAGVEVLVAQSFSKNFGLYGERIGCLHVVHAGVEGSVEKNKA-L--SAAMVSGMTLQIRKTWSMSAIHGAYIVQ 334 (448)
T ss_dssp HHHHHHHTTCCEEEEEECTTTSCCGGGCCEEEEEECCCCSSSHHHHHH-H--HHHHHHHHHHHHHTTTSSCCHHHHHHHH
T ss_pred hHHHHhhcCCcEEEEecccccCCCccccceeeeeeeccccccccCCHH-H--HHHHHHHHHHHHhcccCCccHHHHHHHH
Confidence 22222 22356899999999999999999998 65 3210 0 014555555543 334577788999999
Q ss_pred HHHhhch-----HHHHHHHHHHHHHHHHHHHHHhhcC--CC------CCCCCCCCCceEEEEecCcccccCCCCHHHHHH
Q 014603 305 QILEKTE-----EEFFSKITDILRETADICCDRLKEI--PC------ITCPKKPEGSMFVMVKLNYSLLEGINSDMEFAL 371 (422)
Q Consensus 305 ~~l~~~~-----~~~~~~~~~~~~~~~~~l~~~L~~~--~~------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 371 (422)
.+|.... ...+++.+++++++++.+.+.|+++ ++ +. ...|.+++|.|+.++ .+++.
T Consensus 335 ~~l~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~----------~~~~~ 403 (448)
T 3meb_A 335 VIVHDKRLLQMFYDNVKEMSARIHRMRSLLHASLAKRKTPGPGSKGTWD-HILTAIGMFTFTGLT----------PEHVD 403 (448)
T ss_dssp HHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSTTTCCCT-HHHHCCSSEEECCCC----------HHHHH
T ss_pred HHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCcccccc-eeCCCceEEEecCCC----------HHHHH
Confidence 8887632 1447888899999999999999987 55 54 336788999997663 35667
Q ss_pred HHHHhcCeEEecCCCCCCCCeEEEEecc-ChHHHHHHHHHHHHHHHHhc
Q 014603 372 KLAKEESVIVLPGITVGLKDWLRITFAV-EPSALEDGLGRMKAFYDRHA 419 (422)
Q Consensus 372 ~l~~~~gi~v~~g~~~~~~~~iRis~~~-~~~~l~~~~~~l~~~~~~~~ 419 (422)
.+++++||.+.||. .|||++. +++++++++++|.+++++..
T Consensus 404 ~ll~~~gV~v~~G~-------gRis~a~~~~~~i~~~~~~l~~~l~~~~ 445 (448)
T 3meb_A 404 YLKEKWSIYLVKAG-------GRMSMCGLTESNCDYVAEAIHDAVTKLP 445 (448)
T ss_dssp HHHHHHCEEECSGG-------GEEEGGGCCTTTHHHHHHHHHHHHHHSC
T ss_pred HHHHhCCEEEeCCC-------cEEEEecCCHHHHHHHHHHHHHHHHhcc
Confidence 77788899999975 2999984 88889999999999998654
No 62
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=100.00 E-value=7.6e-42 Score=321.40 Aligned_cols=334 Identities=18% Similarity=0.264 Sum_probs=271.4
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 122 (422)
+++++|||+.|.+. +++++.+.+++.+++.. ...|+. .+..++|+++++++ ++++++|++|+|++++
T Consensus 24 ~~~~~idl~~~~~~----~~~~~~v~~a~~~~~~~--~~~y~~-~~~~~l~~~la~~~------~~~~~~i~~~~g~t~a 90 (361)
T 3ftb_A 24 KGRELLDYSSNINP----LGIPKSFLNNIDEGIKN--LGVYPD-VNYRRLNKSIENYL------KLKDIGIVLGNGASEI 90 (361)
T ss_dssp ----CEETTCCCCT----TCSCHHHHTTHHHHHHG--GGSCCC-TTCHHHHHHHHHHH------TCCSCEEEEESSHHHH
T ss_pred CCCCEEEecCCCCC----CCCCHHHHHHHHHHHHH--hcCCCC-ccHHHHHHHHHHHh------CCCcceEEEcCCHHHH
Confidence 57889999999854 57789999999998875 346744 67899999999999 5678999999999999
Q ss_pred HHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCH
Q 014603 123 IEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTY 202 (422)
Q Consensus 123 ~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~ 202 (422)
++.++.++ |+|+++.|+|+++...++..|.+++.++.++.+ .++++.+++.+++ ++++++++|+||||.++|.
T Consensus 91 l~~~~~~~----d~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~l~~~l~~-~~~v~i~~p~nptG~~~~~ 163 (361)
T 3ftb_A 91 IELSISLF----EKILIIVPSYAEYEINAKKHGVSVVFSYLDENM--CIDYEDIISKIDD-VDSVIIGNPNNPNGGLINK 163 (361)
T ss_dssp HHHHHTTC----SEEEEEESCCTHHHHHHHHTTCEEEEEECCTTS--CCCHHHHHHHTTT-CSEEEEETTBTTTTBCCCH
T ss_pred HHHHHHHc----CcEEEecCChHHHHHHHHHcCCeEEEeecCccc--CCCHHHHHHhccC-CCEEEEeCCCCCCCCCCCH
Confidence 99999888 899999999999999999999999999986543 4677999999987 9999999999999999999
Q ss_pred HHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHH
Q 014603 203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIV 282 (422)
Q Consensus 203 ~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 282 (422)
+++++|+++|+++|+++|+||+|+.+.++ ............++++++.|+||.++++|+|+||+++.+ +++.
T Consensus 164 ~~l~~i~~~~~~~~~~li~De~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~~~~-------~~~~ 235 (361)
T 3ftb_A 164 EKFIHVLKLAEEKKKTIIIDEAFIEFTGD-PSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNN-------KEIA 235 (361)
T ss_dssp HHHHHHHHHHHHHTCEEEEECSSGGGTCC-TTSSSGGGTTTCSSEEEEEESSSTTSCGGGCCEEEEESC-------HHHH
T ss_pred HHHHHHHHHhhhcCCEEEEECcchhhcCC-cccchhHhcccCCCEEEEeeChhhcCCCCcceeEEEeCC-------HHHH
Confidence 99999999999999999999999988775 323333333445678999999999988999999998432 5788
Q ss_pred HHHHhhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccccC
Q 014603 283 DSIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEG 362 (422)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 362 (422)
+.+...... .+++++.+.++.++|+. ..++++.+++++++++.+.+.|+++|++... .+..+.++|+.++.
T Consensus 236 ~~~~~~~~~-~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~~~~~~~~~~~~~----- 306 (361)
T 3ftb_A 236 AKIKAKQNP-WNINCFAEMAAINCLKD--TNYIEESLLWIKKERKRFIEELNKIGFIKRV-FSPHANFVLCRLEN----- 306 (361)
T ss_dssp HHHHTTSCT-TCSCHHHHHHHHHTSSC--HHHHHHHHHHHHHHHHHHHHHHHHSSSEEEE-ECCSSSEEEEEESS-----
T ss_pred HHHHhhCCC-CCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHhCCCCcee-cCCCCeEEEEEcCC-----
Confidence 887765543 47788999999999985 5788999999999999999999998877512 34456788888864
Q ss_pred CCCHHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEeccChHHHHHHHHHHHHHHH
Q 014603 363 INSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAVEPSALEDGLGRMKAFYD 416 (422)
Q Consensus 363 ~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRis~~~~~~~l~~~~~~l~~~~~ 416 (422)
.+..++...+.+ +||.+.||..|+. ++++|++++ +.++++++++.|+++.+
T Consensus 307 -~~~~~l~~~l~~-~gi~v~~g~~~~~~~~~~iRis~~-~~~~~~~l~~~l~~~~~ 359 (361)
T 3ftb_A 307 -ISGEKLYDSLLK-EDIVIRRCCNFIGLDDSFVRFAIK-DEKKNTKFLRALKGVEN 359 (361)
T ss_dssp -SCHHHHHHHHHT-TTEECEECTTSTTCCTTEEEEECC-CHHHHHHHHHHHHHHHH
T ss_pred -CCHHHHHHHHHH-CCeEEeeCccCCCCCCCEEEEEcC-CHHHHHHHHHHHHHHHh
Confidence 156777777755 5999999998864 689999998 44566666666665543
No 63
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=100.00 E-value=1.3e-42 Score=332.98 Aligned_cols=372 Identities=20% Similarity=0.270 Sum_probs=273.3
Q ss_pred CccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCC----CCCCCCCCCCHHHHHHHHHHH
Q 014603 25 GITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSAR----FNCYSSTVGILPARRAIADYL 100 (422)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~----~~~y~~~~g~~~lr~~ia~~l 100 (422)
++.++..+..+... ..++++|+|+.|.|.. ..++.+.+.+++.+.+.+.. ...|++..|.+++|+++++++
T Consensus 14 ~~~~~~~~~~~~~~---~~~~~~i~l~~g~p~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~ 88 (417)
T 3g7q_A 14 HSGITRLMEDLNDG---LRTPGAIMLGGGNPAH--IPAMQDYFQTLLTDMVESGKAADALCNYDGPQGKTALLNALAVLL 88 (417)
T ss_dssp --CHHHHHHHHHC--------CCEECSCCCCCC--CHHHHHHHHHHHHHHHHHTHHHHHHHSTTCTTSHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHhh---ccCCCceEecCcCCCC--CChHHHHHHHHHHHHhhCCcccceeeccCCCCCcHHHHHHHHHHH
Confidence 34566655544333 2457899999998762 10112567777777664421 137988889999999999999
Q ss_pred hhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCC-----EEEec-CCCccchHHHHhhC----CCeEEEeeccCC-CCc
Q 014603 101 NRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGA-----NILLP-RPGFPYYEARATHS----HLEVRHFDLLPA-KGW 169 (422)
Q Consensus 101 ~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd-----~Vl~~-~~~~~~~~~~~~~~----g~~~~~~~~~~~-~~~ 169 (422)
.+.+|+++++++|++|+|+++|++.++++++++|| +|+++ .|+|+++...+... +..+...++... .++
T Consensus 89 ~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~~~gd~~~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (417)
T 3g7q_A 89 RETLGWDIEPQNIALTNGSQSAFFYLFNLFAGRRADGSTKKVLFPLAPEYIGYADSGLEDDLFVSARPNIELLPEGQFKY 168 (417)
T ss_dssp HHHHCCCCCGGGEEEESCHHHHHHHHHHHHSBC----CCBEEEESSCCCHHHHHC-----CCEEECCCEEEEEGGGEEEE
T ss_pred HHHhCCCCCcccEEEeCCcHHHHHHHHHHHcCCCccCCcceEEEeCCCccccchhhccchhhhccccCcccccCCccccc
Confidence 98888889999999999999999999999999987 89997 99999887655322 222233333221 145
Q ss_pred ccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEE
Q 014603 170 EVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLT 249 (422)
Q Consensus 170 ~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~ 249 (422)
.+|++.++ ++++++++++++|+||||.+++.+++++|+++|++||+++|+||+|+.+.. +....... ....+++++
T Consensus 169 ~~d~~~l~--~~~~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~-~~~~~~~~-~~~~~~~i~ 244 (417)
T 3g7q_A 169 HVDFEHLH--IGEETGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFP-GIIFSEAR-PLWNPNIIL 244 (417)
T ss_dssp ECCGGGCC--CCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTT-CCBCSCCC-CCCCTTEEE
T ss_pred ccCHHHhc--cccCceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCccccc-cccccccc-cCCCCCEEE
Confidence 68988887 677899999999999999999999999999999999999999999975321 11111111 122356899
Q ss_pred EecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhh-hccCcchHHHHHHHHHHhhch-HHHHHH-HHHHHHHHH
Q 014603 250 LGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQGAVPQILEKTE-EEFFSK-ITDILRETA 326 (422)
Q Consensus 250 i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~-~~~~~~-~~~~~~~~~ 326 (422)
+.|+||+ +++|+|+||++++ +++++++..... ...+++++.+.++..+++... .....+ .++++++++
T Consensus 245 ~~s~sK~-~~~G~r~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 315 (417)
T 3g7q_A 245 CMSLSKL-GLPGSRCGIIIAN--------DKTITAIANMNGIISLAPGGMGPAMMCEMIKRNDLLRLSETVIKPFYYQRV 315 (417)
T ss_dssp EEESGGG-TCTTSCCEEEECC--------HHHHHHHHHHHHHHCCCCCSHHHHHHHHHHHTTCHHHHHHHTHHHHHHHHH
T ss_pred EEechhc-cCCCcceEEEEeC--------HHHHHHHHHhhcceeeCCCcHHHHHHHHHHcCcchHHHHHHHHHHHHHHHH
Confidence 9999994 9999999999985 578888877664 345678899999999987643 233333 667788888
Q ss_pred HHHHHHhhc-CCC--CCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC---------CCeEE
Q 014603 327 DICCDRLKE-IPC--ITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL---------KDWLR 394 (422)
Q Consensus 327 ~~l~~~L~~-~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~---------~~~iR 394 (422)
+.+.+.|++ +++ +. +..|.+|+++|+.++... .+..++...+ .++||.+.||..|.. .+++|
T Consensus 316 ~~~~~~l~~~l~~~~~~-~~~~~~g~~~~~~~~~~~----~~~~~l~~~l-~~~gi~v~~g~~f~~~~~~~~~~~~~~iR 389 (417)
T 3g7q_A 316 QQTIAIIRRYLSEERCL-IHKPEGAIFLWLWFKDLP----ITTELLYQRL-KARGVLMVPGHYFFPGLDKPWPHTHQCMR 389 (417)
T ss_dssp HHHHHHHHHHCCTTTCE-EECCCBSSEEEEECTTCS----SCHHHHHHHH-HHTTEECEEGGGGCTTBSSCCGGGGGEEE
T ss_pred HHHHHHHHHhcccCCce-eeCCCcceEEEEEcCCCC----CCHHHHHHHH-HHCCEEEECchhhCCCCccccccCCCeEE
Confidence 888888876 554 44 446888999999987421 1566776666 677999999988754 46899
Q ss_pred EEeccChHHHHHHHHHHHHHHHHhcc
Q 014603 395 ITFAVEPSALEDGLGRMKAFYDRHAK 420 (422)
Q Consensus 395 is~~~~~~~l~~~~~~l~~~~~~~~~ 420 (422)
||++.+++++++++++|.++++++.+
T Consensus 390 is~~~~~~~i~~~~~~l~~~l~~~~~ 415 (417)
T 3g7q_A 390 MNYVPEPDKIEAGVKILAEEIERAWR 415 (417)
T ss_dssp EESCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecCCHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999988754
No 64
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=100.00 E-value=7.1e-42 Score=321.93 Aligned_cols=336 Identities=19% Similarity=0.289 Sum_probs=270.1
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 122 (422)
++.++|||+.|.+. +++++.+.+++.+++.. ...|+. .+..++|+++++++ ++++++|++|+|++++
T Consensus 22 ~~~~~idl~~~~~~----~~~~~~v~~a~~~~~~~--~~~y~~-~~~~~l~~~la~~~------~~~~~~v~~~~g~~~a 88 (364)
T 1lc5_A 22 SPDQLLDFSANINP----LGMPVSVKRALIDNLDC--IERYPD-ADYFHLHQALARHH------QVPASWILAGNGETES 88 (364)
T ss_dssp CGGGSEECSSCCCT----TCCCHHHHHHHHHTGGG--GGSCCC-TTCHHHHHHHHHHH------TSCGGGEEEESSHHHH
T ss_pred CccceEEeccccCC----CCCCHHHHHHHHHHHHH--hhcCCC-CCHHHHHHHHHHHH------CcCHHHEEECCCHHHH
Confidence 45679999999844 46789999999998754 346765 47899999999999 5677899999999999
Q ss_pred HHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCH
Q 014603 123 IEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTY 202 (422)
Q Consensus 123 ~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~ 202 (422)
++.+++++ +||+|+++.|+|+++...++..|.+++.++.++++++.+ ++.+.+.++++++++++++|+||||.++|.
T Consensus 89 l~~~~~~~--~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~-l~~~~~~~~~~~~~v~i~~p~nptG~~~~~ 165 (364)
T 1lc5_A 89 IFTVASGL--KPRRAMIVTPGFAEYGRALAQSGCEIRRWSLREADGWQL-TDAILEALTPDLDCLFLCTPNNPTGLLPER 165 (364)
T ss_dssp HHHHHHHH--CCSEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCC-CTTHHHHCCTTCCEEEEESSCTTTCCCCCH
T ss_pred HHHHHHHc--CCCeEEEeCCCcHHHHHHHHHcCCeEEEEeCCcccccch-hHHHHHhccCCCCEEEEeCCCCCCCCCCCH
Confidence 99999998 679999999999999999999999999998765334433 565666666678889999999999999999
Q ss_pred HHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEE-eeCCCCcccchhH
Q 014603 203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLV-TSDPNGILQDSGI 281 (422)
Q Consensus 203 ~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~-~~~~~~~~~~~~~ 281 (422)
+++++|+++|+++|+++|+||+|+.+.+++... +...+..++++++.|+||.++++|+|+||++ ++ +++
T Consensus 166 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~--~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--------~~~ 235 (364)
T 1lc5_A 166 PLLQAIADRCKSLNINLILDEAFIDFIPHETGF--IPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSD--------DAA 235 (364)
T ss_dssp HHHHHHHHHHHHHTCEEEEECTTGGGSTTCCCS--GGGCTTCTTEEEEEESTTTTTCTTTCCEEEECCC--------HHH
T ss_pred HHHHHHHHHhhhcCcEEEEECcChhhccCccch--hhHhccCCCEEEEEECchhhcCCccceEEEEECC--------HHH
Confidence 999999999999999999999999877653222 2222334568999999999988999999999 64 567
Q ss_pred HHHHHhhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCccccc
Q 014603 282 VDSIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLE 361 (422)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 361 (422)
++.+..... +.+++.+.+.++.++|+. ..++++.+++++++++.+.+.|+++|++. + .+..|.|+|+.++.
T Consensus 236 ~~~l~~~~~-~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~-~~~~g~~~~~~~~~---- 306 (364)
T 1lc5_A 236 MARMRRQQM-PWSVNALAALAGEVALQD--SAWQQATWHWLREEGARFYQALCQLPLLT-V-YPGRANYLLLRCER---- 306 (364)
T ss_dssp HHHHHHHSC-TTCSCHHHHHHHHHGGGC--HHHHHHHHHHHHHHHHHHHHHHHTSTTEE-E-CCCSSSEEEEEESC----
T ss_pred HHHHHHhCC-CCCCCHHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHHhcCCCCE-E-CCCCCeEEEEECCC----
Confidence 777776553 347788999999999986 46788899999999999999999988877 4 34557788888763
Q ss_pred CCCCHHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEeccChHHHHHHHHHHHHHHHHh
Q 014603 362 GINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAVEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 362 ~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRis~~~~~~~l~~~~~~l~~~~~~~ 418 (422)
+..++...+. ++||.+.||..|+. .+++||++++ .++++++++.|+++++++
T Consensus 307 ---~~~~l~~~l~-~~gi~v~~g~~~~~~~~~~iRis~~~-~~~~~~l~~~l~~~~~~~ 360 (364)
T 1lc5_A 307 ---EDIDLQRRLL-TQRILIRSCANYPGLDSRYYRVAIRS-AAQNERLLAALRNVLTGI 360 (364)
T ss_dssp ---TTCCHHHHHH-TTTEECEECTTSTTCCTTEEEEECCC-HHHHHHHHHHHHHHC---
T ss_pred ---cHHHHHHHHH-HCCcEEeeCcccCCCCCCEEEEEeCC-HHHHHHHHHHHHHHhhcc
Confidence 2334566664 56999999988753 5799999874 678888888888887664
No 65
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=100.00 E-value=3.4e-43 Score=336.14 Aligned_cols=365 Identities=15% Similarity=0.151 Sum_probs=273.6
Q ss_pred cHHHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHH
Q 014603 17 NEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAI 96 (422)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~i 96 (422)
..++...+++.+..+...+.+. ..+++|||+.|++.+ ++.++.+.+++.++. ......|.+..|.+++|+++
T Consensus 17 ~~~~~~~~~~~i~~~~~~~~~~----~~~~~i~l~~g~~~d---~~~~~~v~~a~~~a~-~~~~~~y~~~~g~~~lr~~i 88 (409)
T 4eu1_A 17 QGPGSMGKPDPILGLGQDFRMD----PAKRKVNLSIGVYRD---DADQPFVLECVKQAT-LGTNMDYAPVTGIASFVEEA 88 (409)
T ss_dssp ----------CHHHHHHHHHHC----CCSSCEECCCSSCCC---TTSCCCCCHHHHTCC-CCSCCCCCCTTCCHHHHHHH
T ss_pred hhcCCCCCCChHHHHHHHHhhC----CCcCceeeeeeEEEC---CCCCEeecHHHHhcC-ccccccCCCCCCcHHHHHHH
Confidence 3478888888888888777655 457899999999632 344555667776663 33456898889999999999
Q ss_pred HHHHhhcCCCCCCCCCEE--EecCHHHHHHHHH---HHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCccc
Q 014603 97 ADYLNRDLPYKLSPDDVY--LTLGCTQAIEVIL---TVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEV 171 (422)
Q Consensus 97 a~~l~~~~~~~~~~~~i~--~~~g~~~a~~~~~---~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 171 (422)
++++....+..+++++|. .+.|++++++.+. ++++++||+|++++|+|.++...++..|.+++.+++.+++++.+
T Consensus 89 a~~~~~~~~~~~~~~~i~~~~~~~g~ga~~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~ 168 (409)
T 4eu1_A 89 QKLCFGPTCAALRDGRIASCQTLGGTGALRIGGDLLNRFVANCNRIYGPDVGYPNHESIFAKAGMELTPYSYYDPATKGL 168 (409)
T ss_dssp HHHHHCSSCHHHHTTCEEEEEESHHHHHHHHHHHHGGGTSSSCCEEEEESSCCTHHHHHHHHTTCEEEEECCEETTTTEE
T ss_pred HHHHcCCCchhhccCceeeeecccchHHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHcCCeEEEEEeecCcCCcC
Confidence 999853211112267884 4899999998764 45678999999999999999999999999999999865567889
Q ss_pred CHHHHHHhhc---CCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCC--CCCCcccc-CCCC
Q 014603 172 DLDAVEALAD---ENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNT--PFVPMGVF-GSIV 245 (422)
Q Consensus 172 d~~~l~~~~~---~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~--~~~~~~~~-~~~~ 245 (422)
|++.|++.++ +.++++++++|+||||.+++.+++++|+++|+++|+++|+||+|+.+.+++. ...++..+ +..+
T Consensus 169 d~~~l~~~l~~~~~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~ 248 (409)
T 4eu1_A 169 NLAGMLECLDKAPEGSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLVDMVP 248 (409)
T ss_dssp CHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHTTSS
T ss_pred cHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccCCcccchHHHHHHHhhCC
Confidence 9999999885 3456667799999999999999999999999999999999999999887652 11122222 3345
Q ss_pred CeEEEecCccccCCCCceeEEE--EeeCCCCcccchh----HHHHHHhhh-hhccCcchHHHHHHHHHHhhch-----HH
Q 014603 246 PVLTLGSISKRWIVPGWRLGWL--VTSDPNGILQDSG----IVDSIKSFL-NISSDPATFIQGAVPQILEKTE-----EE 313 (422)
Q Consensus 246 ~~i~i~s~sK~~~~~G~r~G~~--~~~~~~~~~~~~~----~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~-----~~ 313 (422)
++++++|+||.|+++|+|+||+ ++++ ++ +.+.+.... ..+.+++.+.|.++..+|+... ..
T Consensus 249 ~~i~~~S~SK~~g~~G~riG~~~~v~~~-------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 321 (409)
T 4eu1_A 249 NLIVAQSFSKNFGLYGHRCGALHISTAS-------AEEAKRLVSQLALLIRPMYNNPPLYGAWVVSSILKDPQLTALWKK 321 (409)
T ss_dssp CCEEEEECTTTSSCGGGCCEEEEEECSS-------HHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHH
T ss_pred cEEEEecCcccccCccCCceEEEEEeCC-------HHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhCCHHHHHHHHH
Confidence 7899999999999999999997 5543 34 556665544 3345677899999998888532 34
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCC--C-CCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCC
Q 014603 314 FFSKITDILRETADICCDRLKEIP--C-ITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLK 390 (422)
Q Consensus 314 ~~~~~~~~~~~~~~~l~~~L~~~~--~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~ 390 (422)
.+++.+++++++++.+.+.|++++ + +. +..|.+++|.|+.++ .+++..+++++||.+.||.
T Consensus 322 ~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~~~~~~~~~----------~~~~~~ll~~~gv~v~p~~----- 385 (409)
T 4eu1_A 322 ELKQMSSRIAEVRKRLVSELKACGSVHDWS-HIERQVGMMAYTGLT----------REQVELLRSEYHIYMTLNG----- 385 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCSCCH-HHHHSCSSEEECCCC----------HHHHHHHHHHHCEECCTTC-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCcc-eecCCceEEEEeCCC----------HHHHHHHHHcCCEEEcCCC-----
Confidence 577888999999999999999872 1 55 336788899986553 3456777778899999863
Q ss_pred CeEEEEec-cChHHHHHHHHHHHHHH
Q 014603 391 DWLRITFA-VEPSALEDGLGRMKAFY 415 (422)
Q Consensus 391 ~~iRis~~-~~~~~l~~~~~~l~~~~ 415 (422)
||+++ .+++++++++++|++++
T Consensus 386 ---Ri~~~~~~~~~i~~~~~~l~~~l 408 (409)
T 4eu1_A 386 ---RAAVSGLNSTNVEYVSQAIHNVT 408 (409)
T ss_dssp ---EEEGGGCCTTTHHHHHHHHHHHH
T ss_pred ---EEEEEecCHhhHHHHHHHHHHHh
Confidence 99998 67788999999998875
No 66
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=100.00 E-value=9.2e-43 Score=334.36 Aligned_cols=348 Identities=19% Similarity=0.187 Sum_probs=274.2
Q ss_pred CceeecCCCCCCCCCCCCcHHHHHHHHHHhh--CC-CCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHH
Q 014603 46 PLIPLGHGDPSAFPSFRTASVAVDAIVHSVR--SA-RFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (422)
Q Consensus 46 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~--~~-~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 122 (422)
.+|+|+.|.|.. ..+++++.+.+++.+.+. .. ....|++..|.+++|+++++++ ++++++|++|+|++++
T Consensus 33 ~~i~l~~g~~~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~------~~~~~~i~~t~G~~~a 105 (422)
T 3d6k_A 33 LSLDLTRGKPSA-EQLDLSNDLLSLPGGDFRTKDGVDCRNYGGLLGIADIRELWAEAL------GLPADLVVAQDGSSLN 105 (422)
T ss_dssp CCEECCCCSCCH-HHHHTTGGGGGCSTTCCBCTTCCBTTSSCCSSCCHHHHHHHHHHH------TCCGGGEEECSSCHHH
T ss_pred CeEeCCCCCCCh-hhCCCcHHHHHHHHHHHhhccchhhhCCCCCCCCHHHHHHHHHHh------CCChhHEEEecchHHH
Confidence 489999999641 014666678887766531 22 3568999899999999999999 5688999999999999
Q ss_pred H--HHHHHHhcCC------------CCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC-CceEE
Q 014603 123 I--EVILTVLARP------------GANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE-NTVAL 187 (422)
Q Consensus 123 ~--~~~~~~l~~~------------gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i 187 (422)
+ .++++++..+ +|+|++++|+|+++...++..|.+++.++.+++ ++|++.|++.+++ +++++
T Consensus 106 l~l~~~~~~l~~~~~~g~~~~~~~d~~~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~---g~d~~~l~~~l~~~~~~~v 182 (422)
T 3d6k_A 106 IMFDLISWSYTWGNNDSSRPWSAEEKVKWLCPVPGYDRHFTITEHFGFEMINVPMTDE---GPDMGVVRELVKDPQVKGM 182 (422)
T ss_dssp HHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHHTCEEEEEEEETT---EECHHHHHHHHTSTTEEEE
T ss_pred HHHHHHHHHhcCcccccccccccCCCCEEEEeCCccHHHHHHHHHcCCEEEecCCCCC---CCCHHHHHHHHhcCCCeEE
Confidence 7 6777877655 358999999999999999999999999998642 4899999998875 67887
Q ss_pred E-EeCCCCCcccccCHHHHHHHHHHHH-HcCcEEEEcccccc--cccCCCCCCCccc----cCCCCCeEEEecCccccCC
Q 014603 188 V-IINPGNPCGNVYTYQHLQKIAETAK-KLGIMVIADEVYDH--LAFGNTPFVPMGV----FGSIVPVLTLGSISKRWIV 259 (422)
Q Consensus 188 ~-i~~p~nptG~~~~~~~l~~i~~~~~-~~~~~li~D~~~~~--~~~~~~~~~~~~~----~~~~~~~i~i~s~sK~~~~ 259 (422)
+ +++|+||||.+++.+++++|+++|+ ++|++||+||+|.. +.+++....++.. .+..+++++++||||+ ++
T Consensus 183 ~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~~ 261 (422)
T 3d6k_A 183 WTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSKI-TH 261 (422)
T ss_dssp EECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTCEEEEEESTTT-SC
T ss_pred EEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECCccccccCCCCCCCcChhhHhhccCCCCcEEEEcChhhh-cC
Confidence 7 6899999999999999999999999 99999999999985 4333322333311 2344678999999999 89
Q ss_pred CCceeEEEEeeCCCCcccchhHHHHHHhhhh-hccCcchHHHHHHHHHHhhch--HHHHHHHHHHHHHHHHHHHHHhhc-
Q 014603 260 PGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQGAVPQILEKTE--EEFFSKITDILRETADICCDRLKE- 335 (422)
Q Consensus 260 ~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~~l~~~L~~- 335 (422)
+|+|+||++++ +++++.+..... .+.+++.+.|.++.++|+... +.++++.++.++++++.+.+.|++
T Consensus 262 ~GlriG~~~~~--------~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 333 (422)
T 3d6k_A 262 AGSGVSFFASS--------KENIEWYASHANVRGIGPNKLNQLAHAQFFGDVAGLKAHMLKHAASLAPKFERVLEILDSR 333 (422)
T ss_dssp TTSSCEEEECC--------HHHHHHHHHHHHHHCSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccceEEEEeC--------HHHHHHHHHHHHhhcCCCCHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999986 568888877654 345778899999999998622 467788888888888888888765
Q ss_pred ---CCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEec-CCCCC-----CCCeEEEEec-cChHHHH
Q 014603 336 ---IPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLP-GITVG-----LKDWLRITFA-VEPSALE 405 (422)
Q Consensus 336 ---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~-g~~~~-----~~~~iRis~~-~~~~~l~ 405 (422)
++++. +..|.+|+|+|+.++.. +..++. .+++++||.+.| |..|. ..+++|||++ +++++++
T Consensus 334 l~~~~~~~-~~~p~~g~~~~~~~~~~------~~~~~~-~~l~~~gV~v~~~g~~f~~~~~~~~~~iRis~~~~~~e~i~ 405 (422)
T 3d6k_A 334 LSEYGVAK-WTSPTGGYFISVDVVPG------TASRVV-ELAKEAGIALTGAGSSFPLHNDPNNENIRLAPSLPPVAELE 405 (422)
T ss_dssp HGGGTCEE-ECCCSBSSCEEEEESTT------CHHHHH-HHHHHTTEECCCTTTTSGGGCCTTSCEEEECCSSSCHHHHH
T ss_pred cCcCCceE-EeCCCcceEEEEECCCC------CHHHHH-HHHHHCCeEEEcCccccCCCCCCCCCeEEEecCCCCHHHHH
Confidence 33344 34788899999999742 344444 456778999999 55563 2589999999 7999999
Q ss_pred HHHHHHHHHHHHhcc
Q 014603 406 DGLGRMKAFYDRHAK 420 (422)
Q Consensus 406 ~~~~~l~~~~~~~~~ 420 (422)
+++++|+++++++.+
T Consensus 406 ~~~~~l~~~l~~~~~ 420 (422)
T 3d6k_A 406 VAMDGFATCVLMAAL 420 (422)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999987643
No 67
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=100.00 E-value=5.1e-43 Score=336.78 Aligned_cols=350 Identities=17% Similarity=0.145 Sum_probs=277.1
Q ss_pred CCCceeecCCCCCCCCCCCCcHHHHHHH--HHHhhCC--CCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCH
Q 014603 44 TRPLIPLGHGDPSAFPSFRTASVAVDAI--VHSVRSA--RFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGC 119 (422)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~--~~~~~~~--~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~ 119 (422)
....|||+.|.|.. ..++.++.+.+++ .+.+... ....|++..|.+++|+++++++ ++++++|++|+|+
T Consensus 32 ~~~~i~~~~G~p~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~------~~~~~~i~~t~G~ 104 (427)
T 3ppl_A 32 KNLKLDLTRGKPSS-EQLDFADELLALPGKGDFKAADGTDVRNYGGLDGIVDIRQIWADLL------GVPVEQVLAGDAS 104 (427)
T ss_dssp TCCCEECCCCSCCH-HHHHTTGGGGGCSCTTCCBCTTSCBTTSSCCSSCCHHHHHHHHHHH------TSCGGGEEECSSC
T ss_pred CCceEecCCCCCCh-HHCCCcHHHHHHhhhHHHhhccchhhcCCCCCCCcHHHHHHHHHHh------CCCcceEEEeCCc
Confidence 45679999999762 1122333566665 4444332 3468998889999999999999 5688999999999
Q ss_pred HHHH--HHHHHHhcC--C----------CCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhc-CCc
Q 014603 120 TQAI--EVILTVLAR--P----------GANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALAD-ENT 184 (422)
Q Consensus 120 ~~a~--~~~~~~l~~--~----------gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~ 184 (422)
++++ +.++++++. + ||+|++++|+|.++...++..|.+++.++++.+ ++|++.|++.++ +++
T Consensus 105 ~~al~~~~~~~~l~~~~~g~~~~~~~~~gd~V~v~~p~y~~~~~~~~~~g~~~~~v~~~~~---g~d~~~l~~~l~~~~~ 181 (427)
T 3ppl_A 105 SLNIMFDVISWSYIFGNNDSVQPWSKEETVKWICPVPGYDRHFSITERFGFEMISVPMNED---GPDMDAVEELVKNPQV 181 (427)
T ss_dssp HHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHTTCEEEEEEEETT---EECHHHHHHHTTSTTE
T ss_pred HHHHHHHHHHHHHhccCCcccccccCCCCCEEEEcCCCcHHHHHHHHHcCCEEEEeCCCCC---CCCHHHHHHHHhcCCC
Confidence 9999 588888876 6 899999999999999999999999999998643 489999999884 567
Q ss_pred eEEEEe-CCCCCcccccCHHHHHHHHHHH-HHcCcEEEEcccccccccCCCCCC--Ccccc----CCCCCeEEEecCccc
Q 014603 185 VALVII-NPGNPCGNVYTYQHLQKIAETA-KKLGIMVIADEVYDHLAFGNTPFV--PMGVF----GSIVPVLTLGSISKR 256 (422)
Q Consensus 185 ~~i~i~-~p~nptG~~~~~~~l~~i~~~~-~~~~~~li~D~~~~~~~~~~~~~~--~~~~~----~~~~~~i~i~s~sK~ 256 (422)
++++++ +|+||||.++|.+++++|+++| +++|++||+||+|+.+.|++.... ++..+ +..+++++++||||+
T Consensus 182 ~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 261 (427)
T 3ppl_A 182 KGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSKI 261 (427)
T ss_dssp EEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTTT
T ss_pred eEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEEECCCcccccCCCCCCccchhhhhhccCCCCcEEEEechhhc
Confidence 777655 6799999999999999999999 999999999999999777654322 23222 244678999999999
Q ss_pred cCCCCceeEEEEeeCCCCcccchhHHHHHHhhhh-hccCcchHHHHHHHHHHhhc--hHHHHHHHHHHHHHHHHHHHHHh
Q 014603 257 WIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQGAVPQILEKT--EEEFFSKITDILRETADICCDRL 333 (422)
Q Consensus 257 ~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~~~l~~~L 333 (422)
+++|+|+||++++ +++++.+..... ...+++.+.|.++..+++.. .+.++.+.++.++++++.+.+.|
T Consensus 262 -~~~G~r~G~~~~~--------~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L 332 (427)
T 3ppl_A 262 -TLAGAGVSFFLTS--------AENRKWYTGHAGIRGIGPNKVNQLAHARYFGDAEGVRAVMRKHAASLAPKFNKVLEIL 332 (427)
T ss_dssp -SCTTSSCEEEECC--------HHHHHHHHHHHHHHCSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -cCcCccEEEEEcC--------HHHHHHHHHHhhcccCCCCHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999986 568888877654 34577889999999999862 25677888888888888888887
Q ss_pred hc----CCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEec-CCCCC-----CCCeEEEEecc-ChH
Q 014603 334 KE----IPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLP-GITVG-----LKDWLRITFAV-EPS 402 (422)
Q Consensus 334 ~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~-g~~~~-----~~~~iRis~~~-~~~ 402 (422)
++ ++++. +..|.+|+|+|+.++.. +..++... +.++||.+.| |..|. ..+++|||++. +++
T Consensus 333 ~~~l~~~~~~~-~~~p~~g~~~~~~~~~~------~~~~~~~~-l~~~gv~v~~~g~~~~~~~~~~~~~~Ris~~~~~~~ 404 (427)
T 3ppl_A 333 DSRLAEYGVAQ-WTVPAGGYFISLDVVPG------TASRVAEL-AKEAGIALTGAGSSYPLRQDPENKNLRLAPSLPPVE 404 (427)
T ss_dssp HHHHGGGTCCE-ECCCSBSSCEEEECSTT------CHHHHHHH-HHHTTEECCCTTTTSGGGCCTTSCEEEECCSSSCHH
T ss_pred HHhcCCCCceE-EeCCCccEEEEEECCcc------hHHHHHHH-HHHCCCEEecCcCcCCCCCCCCCCeEEEECCCCCHH
Confidence 65 23455 44788899999999753 45566554 5677999999 55553 36899999995 889
Q ss_pred HHHHHHHHHHHHHHHhcc
Q 014603 403 ALEDGLGRMKAFYDRHAK 420 (422)
Q Consensus 403 ~l~~~~~~l~~~~~~~~~ 420 (422)
++++++++|.+++++...
T Consensus 405 ~i~~~~~~l~~~l~~~~~ 422 (427)
T 3ppl_A 405 ELEVAMDGVATCVLLAAA 422 (427)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999987643
No 68
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=100.00 E-value=4.4e-43 Score=334.07 Aligned_cols=370 Identities=19% Similarity=0.201 Sum_probs=272.7
Q ss_pred HHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCC-CCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHH
Q 014603 19 ELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSA-FPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIA 97 (422)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~-~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia 97 (422)
++...+++.++.+...+... .++++|||+.|.+.. ....++++.+.+++.+++.......|.+..+.+++|++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~----~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la 79 (396)
T 2q7w_A 4 NITAAPADPILGLADLFRAD----ERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQ 79 (396)
T ss_dssp TCCCCCC---------------------CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCTTCCHHHHHHHH
T ss_pred ccccCCCchHHHHHHHHhcc----CCCCceecccccccCCCCCccCcHHHHHHHHhhcCcccccCCCCCCCCHHHHHHHH
Confidence 45566777777777655433 356799999998421 1223667999999998876544557988889999999999
Q ss_pred HHHhhcCCCCCCCCCEEE--ecCHHHHHHHHHHHh--cCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCH
Q 014603 98 DYLNRDLPYKLSPDDVYL--TLGCTQAIEVILTVL--ARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDL 173 (422)
Q Consensus 98 ~~l~~~~~~~~~~~~i~~--~~g~~~a~~~~~~~l--~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~ 173 (422)
+++....+..+++++|++ |+|+++|++.+++.+ ..+||+|+++.|+|+++...++..|.+++.++..+++++.+|+
T Consensus 80 ~~~~~~~~~~~~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~ 159 (396)
T 2q7w_A 80 ELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159 (396)
T ss_dssp HHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHSCCCEEEEEESCCTHHHHHHHHTTCEEEEEECEETTTTEECH
T ss_pred HHHhcCCCCccccccEEEEecccchhhHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHcCCceEEEecccCCCCCcCH
Confidence 999653322245789998 999999999998776 3699999999999999999999999999999886445678999
Q ss_pred HHHHHhhcC---CceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCC-CCCCCccccCC-CCCeE
Q 014603 174 DAVEALADE---NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGN-TPFVPMGVFGS-IVPVL 248 (422)
Q Consensus 174 ~~l~~~~~~---~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~-~~~~~~~~~~~-~~~~i 248 (422)
+.+++.+++ +++++++++|+||||.+++.+++++|+++|+++|+++|+||+|..+.+++ ....++..+.. .++++
T Consensus 160 ~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i 239 (396)
T 2q7w_A 160 DALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELI 239 (396)
T ss_dssp HHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEE
T ss_pred HHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccchhHHHHHHHhcCCcEE
Confidence 999998864 36778889999999999999999999999999999999999999887653 11122332321 24689
Q ss_pred EEecCccccCCCCceeEEEEe--eCCCCcccchhHHHHHHhhh-hhccCcchHHHHHHHHHHhhch-----HHHHHHHHH
Q 014603 249 TLGSISKRWIVPGWRLGWLVT--SDPNGILQDSGIVDSIKSFL-NISSDPATFIQGAVPQILEKTE-----EEFFSKITD 320 (422)
Q Consensus 249 ~i~s~sK~~~~~G~r~G~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~~ 320 (422)
+++|+||.|+++|+|+||+++ +++. .. +++++.+.... ..+.+++.+.+.++.++|+... +.++++.++
T Consensus 240 ~~~s~sK~~~~~G~riG~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~ 316 (396)
T 2q7w_A 240 VASSYSXNFGLYNERVGACTLVAADSE-TV--DRAFSQMKAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQ 316 (396)
T ss_dssp EEEECTTTTTCGGGCCEEEEEECSSHH-HH--HHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHC-C
T ss_pred EEEeccccccccccccceEEEEcCCHH-HH--HHHHHHHHHHHhhccCCCCcHHHHHHHHHhcChhhHHHHHHHHHHHHH
Confidence 999999999889999999986 2210 00 13455554433 2334568889999999887631 357788888
Q ss_pred HHHHHHHHHHHHhhcCC---CCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEe
Q 014603 321 ILRETADICCDRLKEIP---CITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITF 397 (422)
Q Consensus 321 ~~~~~~~~l~~~L~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~ 397 (422)
+++++++.+.+.|++++ ++. +..|.+|+|+|+.++ . +.+..+++++||.+.|| +||++
T Consensus 317 ~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~~~~~~~~~~---------~-~~~~~~l~~~gv~v~~~--------~Ris~ 377 (396)
T 2q7w_A 317 RIQRMRQLFVNTLQEKGANRDFS-FIIKQNGMFSFSGLT---------K-EQVLRLREEFGVYAVAS--------GRVNV 377 (396)
T ss_dssp HHHHHHHHHHHHHHHTTCCSCCT-HHHHCCSSEEECCCC---------H-HHHHHHHHHHCEECCTT--------CEEEG
T ss_pred HHHHHHHHHHHHHHhcCCCCCcc-eecCCCceEEEecCC---------H-HHHHHHHHhcCeeecCC--------ceEEE
Confidence 99999999999999874 366 336788889887663 2 34556667789999885 59999
Q ss_pred c-cChHHHHHHHHHHHHH
Q 014603 398 A-VEPSALEDGLGRMKAF 414 (422)
Q Consensus 398 ~-~~~~~l~~~~~~l~~~ 414 (422)
+ .+++++++++++|+++
T Consensus 378 ~~~~~e~i~~~~~~l~~~ 395 (396)
T 2q7w_A 378 AGMTPDNMAPLCEAIVAV 395 (396)
T ss_dssp GGCCTTTHHHHHHHHHHH
T ss_pred eecCHHHHHHHHHHHHhc
Confidence 8 4899999999999875
No 69
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=100.00 E-value=2.5e-42 Score=339.29 Aligned_cols=357 Identities=20% Similarity=0.277 Sum_probs=280.3
Q ss_pred CceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCC-CCCCCHHHHHHHHHHHhhc-CC-CCCC-CCCEEEecCHHH
Q 014603 46 PLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYS-STVGILPARRAIADYLNRD-LP-YKLS-PDDVYLTLGCTQ 121 (422)
Q Consensus 46 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~-~~~g~~~lr~~ia~~l~~~-~~-~~~~-~~~i~~~~g~~~ 121 (422)
++|+|+.|.+. ++ ++.+.+++.+.+.. ..|+ +..|.+++|+.+++++.+. .+ ..+. +++|++|+|+++
T Consensus 104 ~~i~l~~g~~~----~~-~~~~v~a~~~~~~~---~~y~~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~~i~~t~G~t~ 175 (533)
T 3f6t_A 104 DAVNYCHTELG----LN-RDKVVAEWVNGAVA---NNYPVPDRCLVNTEKIINYFLQELSYKDANLAEQTDLFPTEGGTA 175 (533)
T ss_dssp HHHHHHHHTTC----CC-HHHHHHHHHHHHHT---CSCCSSSSCCHHHHHHHHHHHHHHHTTTCCCGGGEEEEEEEHHHH
T ss_pred hheeccCCCCC----cC-CcHHHHHHHHHHHh---CCCCCCcccHHHHHHHHHHHHHHhcCCCCCCCCcceEEEECCHHH
Confidence 47899999866 33 56777777777654 2454 7789999999999999665 33 3444 469999999999
Q ss_pred HHHHHHHH-----hcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccC--CCCcccCHHHHHHhhcCCceEEEEeCCCC
Q 014603 122 AIEVILTV-----LARPGANILLPRPGFPYYEARATHSHLEVRHFDLLP--AKGWEVDLDAVEALADENTVALVIINPGN 194 (422)
Q Consensus 122 a~~~~~~~-----l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~d~~~l~~~~~~~~~~i~i~~p~n 194 (422)
++..++.+ ++++||+|+++.|+|.++...+...|.+++.++++. .+++.+|++.|++.++++++++++++|+|
T Consensus 176 al~~~~~~l~~~~l~~~gd~Viv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~d~~~l~~~l~~~~k~v~l~~p~N 255 (533)
T 3f6t_A 176 AIVYAFHSLAENHLLKKGDKIAINEPIFTPYLRIPELKDYELVEVDLHSYEKNDWEIEPNEIEKLKDPSIKALIVVNPTN 255 (533)
T ss_dssp HHHHHHHHHHHTTSSCTTCEEEEESSCCHHHHTSGGGGGSEEEEECCCEETTTTSEECHHHHHHHSCTTEEEEEEESSCT
T ss_pred HHHHHHHHhhhhhccCCcCEEEEcCCCcHHHHHHHHHcCCeEEEEEecCCcccCCCCCHHHHHHHhCCCCeEEEEeCCCC
Confidence 99999998 789999999999999999998898999999998865 56688999999999988999999999999
Q ss_pred CcccccCHHHHHHHHHHHH-HcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCC
Q 014603 195 PCGNVYTYQHLQKIAETAK-KLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPN 273 (422)
Q Consensus 195 ptG~~~~~~~l~~i~~~~~-~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~ 273 (422)
|||.+++.+++++|+++|+ ++|+++|+||+|+.+.++. .++.... .++++++.||||.|+++|+|+||+++++..
T Consensus 256 PtG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~~---~~~~~~~-~~~~i~~~S~SK~~g~~G~RiG~l~~~~~~ 331 (533)
T 3f6t_A 256 PTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPNF---KSIYSVV-PYNTMLVYSYSKLFGCTGWRLGVIALNEKN 331 (533)
T ss_dssp TTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTC---CCHHHHS-GGGEEEEEESHHHHTCGGGCEEEEEEESSC
T ss_pred CCccccCHHHHHHHHHHHHhCCCCEEEEcCCccccccCc---cCHhhcC-CCCEEEEecCcccCCCcccceEEEEECcHH
Confidence 9999999999999999999 6899999999999877642 2333332 257899999999999999999999997531
Q ss_pred CcccchhHHHHH--------------------------------Hhhh-hhccCcchHHHHH----HHHHHh-----hch
Q 014603 274 GILQDSGIVDSI--------------------------------KSFL-NISSDPATFIQGA----VPQILE-----KTE 311 (422)
Q Consensus 274 ~~~~~~~~~~~~--------------------------------~~~~-~~~~~~~~~~~~a----~~~~l~-----~~~ 311 (422)
. . ..+++.+ .... ..+.+++.+.|.+ +..+|. ...
T Consensus 332 ~-~--~~li~~l~~~~~~~~~~~~~~~~~~p~~~~~i~rl~~~~~~~~~~~~~~~~~~~q~a~a~~a~~~L~~~~g~~~~ 408 (533)
T 3f6t_A 332 V-F--DDNIAHLDKVELRQLHKRYSSVVLDPDKMKFIDRLCADSRSIGLYHTAGLSTPQQIMEALFSMTHLLTSTNGGSD 408 (533)
T ss_dssp H-H--HHHHHTSCHHHHHHHHHHHHTTCSCGGGCCHHHHHHHHHTTTTTGGGCSCCHHHHHHHHHHHHHHHTTCBGGGTB
T ss_pred H-H--HHHHHhcchhhHHHHHhhhhccccCcchhhhHHHHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHhhhccccch
Confidence 0 0 0122211 1122 2344667777777 445564 223
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccc--cC---------CCCHHHHHHHHHHhcCeE
Q 014603 312 EEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLL--EG---------INSDMEFALKLAKEESVI 380 (422)
Q Consensus 312 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~---------~~~~~~~~~~l~~~~gi~ 380 (422)
+.++++.++.++++++.+.+.|. + ++. ...|.+++|+|+.++.... .+ ..++.+++..+++++||.
T Consensus 409 ~~~~~~~~~~~~~r~~~l~~~L~-~-~~~-~~~~~~g~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~ll~~~GV~ 485 (533)
T 3f6t_A 409 DPYIDIARKLVSERYDQLHDAMQ-A-PKD-ETDTNTHYYSLIDIYRLAEKIYGKEFRDYLTNNFEQVDFLLKLAEKNGVV 485 (533)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHT-C-CCC-CSTTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHTTSS
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC-C-Ccc-ccCCCceEEEEEehHhhhhhccchHHHHHhhccCCHHHHHHHHHHhCCEE
Confidence 57888999999999999999997 6 566 4478889999998863100 00 014567778888889999
Q ss_pred EecCCCCCC-CCeEEEEec-cChHHHHHHHHHHHHHHHHhcc
Q 014603 381 VLPGITVGL-KDWLRITFA-VEPSALEDGLGRMKAFYDRHAK 420 (422)
Q Consensus 381 v~~g~~~~~-~~~iRis~~-~~~~~l~~~~~~l~~~~~~~~~ 420 (422)
+.||..|+. .+++|+|++ .+++++++++++|.++++++.+
T Consensus 486 v~pg~~f~~~~~~iRls~a~~~~e~i~~~i~~L~~~l~~~~~ 527 (533)
T 3f6t_A 486 LVDGVGFGAKPGELRVSQANLPTEDYALIGKQVLELLKEYYE 527 (533)
T ss_dssp SCTTEEECSSTTEEEEESSSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred EeCCcccCCCCCEEEEEEeeCCHHHHHHHHHHHHHHHHHHHH
Confidence 999998877 689999999 6899999999999999988753
No 70
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=100.00 E-value=2e-46 Score=356.54 Aligned_cols=351 Identities=17% Similarity=0.268 Sum_probs=290.2
Q ss_pred CceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHH
Q 014603 46 PLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEV 125 (422)
Q Consensus 46 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~ 125 (422)
++|+|+.|++. +++++.+.+++.+++... ...|++. ..++|+++++++.+.+|..+++++|++|+|+++++..
T Consensus 32 ~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~v~~~~g~~~a~~~ 104 (392)
T 3b1d_A 32 QLLPAWIADMD----FEVMPEVKQAIHDYAEQL-VYGYTYA--SDELLQAVLDWEKSEHQYSFDKEDIVFVEGVVPAISI 104 (392)
Confidence 89999999964 678899999999988653 3467764 7899999999998877777888999999999999999
Q ss_pred HHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCC-CcccCHHHHHHhhc-CCceEEEEeCCCCCcccccCHH
Q 014603 126 ILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAK-GWEVDLDAVEALAD-ENTVALVIINPGNPCGNVYTYQ 203 (422)
Q Consensus 126 ~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~d~~~l~~~~~-~~~~~i~i~~p~nptG~~~~~~ 203 (422)
++++++++||+|+++.|+|+++...++..|.+++.++.++.+ +|.+|++.+++.++ .+++++++++|+||||.+++.+
T Consensus 105 ~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~ 184 (392)
T 3b1d_A 105 AIQAFTKEGEAVLINSPVYPPFARSVRLNNRKLVSNSLKEENGLFQIDFEQLENDIVENDVKLYLLCNPHNPGGRVWERE 184 (392)
Confidence 999999999999999999999999888889998888875332 46689999999886 5788888999999999999999
Q ss_pred HHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCC--CCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhH
Q 014603 204 HLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS--IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGI 281 (422)
Q Consensus 204 ~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~--~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~ 281 (422)
++++|+++|+++|+++|+||+|..+.+++....++..+.. .++++++.|+||.|+++|+|+||+++++ +++
T Consensus 185 ~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~-------~~~ 257 (392)
T 3b1d_A 185 VLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAIIEN-------PTL 257 (392)
Confidence 9999999999999999999999998887655445555543 4678999999999988999999999864 236
Q ss_pred HHHHHhhhhhc--cCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCCCCCCCceEEEEecCcc
Q 014603 282 VDSIKSFLNIS--SDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKE-IPCITCPKKPEGSMFVMVKLNYS 358 (422)
Q Consensus 282 ~~~~~~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~g~~~~~~~~~~ 358 (422)
++.+....... ++++++.+.++.++|+.. +.++++.+++++++++.+.+.|++ +|++. +..|.+++++|+.++..
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~i~~~~~ 335 (392)
T 3b1d_A 258 CAQFKHQQLVNNHHEVSSLGYIATETAYRYG-KPWLVALKAVLEENIQFAVEYFAQEAPRLK-VMKPQGTYLIWLDFSDY 335 (392)
Confidence 66666654332 356788899888888742 567888899999999999999988 78887 44778888888888641
Q ss_pred cccCCCCHHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEeccChHHHHHHHHHHHHHHH
Q 014603 359 LLEGINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAVEPSALEDGLGRMKAFYD 416 (422)
Q Consensus 359 ~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRis~~~~~~~l~~~~~~l~~~~~ 416 (422)
. .+..++...+++++||.+.||..|+. ++++||+++.+++++++++++|+++++
T Consensus 336 ~----~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~e~i~~~l~~l~~~l~ 391 (392)
T 3b1d_A 336 G----LTDDALFTLLHDQAKVILNRGSDYGSEGELHARLNIAAPKSLVEEICKRIVCCLP 391 (392)
Confidence 1 13456666665577999999988863 578999999888999999999998875
No 71
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=100.00 E-value=1.9e-42 Score=332.52 Aligned_cols=350 Identities=18% Similarity=0.247 Sum_probs=276.9
Q ss_pred CCCceeecCCCCCCCCCCCCcHHHHHHHH--HHhhCC-CCCCC-CCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCH
Q 014603 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIV--HSVRSA-RFNCY-SSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGC 119 (422)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~--~~~~~~-~~~~y-~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~ 119 (422)
....|||+.|.|.. ..++.++.+.+++. +.+... ....| ++..|.+++|+++++++ ++++++|++|+|+
T Consensus 24 ~~~~i~l~~g~p~~-~~~~~~~~v~~a~~~~~~~~~~~~~~~Yp~~~~g~~~lr~~ia~~~------~~~~~~i~~t~G~ 96 (423)
T 3ez1_A 24 RGLNLNMQRGQPAD-ADFDLSNGLLTVLGAEDVRMDGLDLRNYPGGVAGLPSARALFAGYL------DVKAENVLVWNNS 96 (423)
T ss_dssp HTCCEESCCCCCCH-HHHHTTGGGGGSCCGGGCEETTEETTSSCSCTTCCHHHHHHHHHHT------TSCGGGEEECSSC
T ss_pred CCceEecCCCCCCh-HhCCCcHHHHHHHhhhHHhhcchhhhCCCCCCCChHHHHHHHHHHh------CCChhhEEEeCCc
Confidence 45689999999662 11466778888875 444422 24689 78889999999999999 5688999999999
Q ss_pred HHHHH--HHHHHhcC--C---------CCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhh--cCCc
Q 014603 120 TQAIE--VILTVLAR--P---------GANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALA--DENT 184 (422)
Q Consensus 120 ~~a~~--~~~~~l~~--~---------gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~--~~~~ 184 (422)
+++++ .++++++. + ||+|+++.|+|+++...++..|.+++.++.+.+ ++|++.|++.+ .+++
T Consensus 97 ~~al~~~~~~~~l~~~~~g~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~---g~d~~~l~~~l~~~~~~ 173 (423)
T 3ez1_A 97 SLELQGLVLTFALLHGVRGSTGPWLSQTPKMIVTVPGYDRHFLLLQTLGFELLTVDMQSD---GPDVDAVERLAGTDPSV 173 (423)
T ss_dssp HHHHHHHHHHHHHHTCCTTCSSCGGGGCCEEEEEESCCHHHHHHHHHHTCEEEEEEEETT---EECHHHHHHHHHSCTTE
T ss_pred HHHHHHHHHHHHHhccCCCccccccCCCCEEEEcCCCcHHHHHHHHHcCCEEEeccCCCC---CCCHHHHHHHHhhCCCc
Confidence 99998 88888877 7 599999999999999999999999999998643 48999999998 4678
Q ss_pred eEEEEe-CCCCCcccccCHHHHHHHHHHH-HHcCcEEEEcccccccccCC-C--CCCCcccc----CCCCCeEEEecCcc
Q 014603 185 VALVII-NPGNPCGNVYTYQHLQKIAETA-KKLGIMVIADEVYDHLAFGN-T--PFVPMGVF----GSIVPVLTLGSISK 255 (422)
Q Consensus 185 ~~i~i~-~p~nptG~~~~~~~l~~i~~~~-~~~~~~li~D~~~~~~~~~~-~--~~~~~~~~----~~~~~~i~i~s~sK 255 (422)
+++++. +|+||||.+++.+++++|+++| +++|+++|+||+|..+.+.+ . ...++..+ +..++++++.|+||
T Consensus 174 ~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK 253 (423)
T 3ez1_A 174 KGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLARDAGYPDRAFVFASTSK 253 (423)
T ss_dssp EEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCCSSSCCCCCCHHHHHHHHTCTTSEEEEEESTT
T ss_pred eEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcchhhcCCCCCCCCcchhhhhhccCCCCeEEEEeCchh
Confidence 888654 7899999999999999999999 99999999999999655544 2 22233222 34467899999999
Q ss_pred ccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhh-hccCcchHHHHHHHHHHhh--ch-HHHHHHHHHHHHHHHHHHHH
Q 014603 256 RWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQGAVPQILEK--TE-EEFFSKITDILRETADICCD 331 (422)
Q Consensus 256 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~--~~-~~~~~~~~~~~~~~~~~l~~ 331 (422)
+ +++|+|+||++++ +++++.+..... ...+++.+.|.++..+++. .. ..++++.++.++++++.+.+
T Consensus 254 ~-~~~G~r~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~ 324 (423)
T 3ez1_A 254 I-TFAGAGLGFVASS--------EDNIRWLSKYLGAQSIGPNKVEQARHVKFLTEYPGGLEGLMRDHAAIIAPKFRAVDE 324 (423)
T ss_dssp T-SCSSSSCEEEEEC--------HHHHHHHHHHHHHSCSCCCHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred h-ccCCcceEEEEeC--------HHHHHHHHHHHhhhccCCCHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHH
Confidence 9 7899999999986 468888877664 3457788999999998886 22 46777777888888877777
Q ss_pred Hhhc----CC-CCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEec-CCCCC-----CCCeEEEEec-c
Q 014603 332 RLKE----IP-CITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLP-GITVG-----LKDWLRITFA-V 399 (422)
Q Consensus 332 ~L~~----~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~-g~~~~-----~~~~iRis~~-~ 399 (422)
.|.+ ++ ++. +..|.+|+|+|+.++.. +..++. .+++++||.+.| |..|+ .++++||+++ .
T Consensus 325 ~l~~~l~~~~~~~~-~~~p~~g~~~~~~~~~~------~~~~~~-~~l~~~gv~v~~~g~~~~~~~~~~~~~iRis~~~~ 396 (423)
T 3ez1_A 325 VLRAELGEGGEYAT-WTLPKGGYFISLDTAEP------VADRVV-KLAEAAGVSLTPAGATYPAGQDPHNRNLRLAPTRP 396 (423)
T ss_dssp HHHHHHTTTTSSEE-ECCCSBSSCEEEEESSS------CHHHHH-HHHHHTTEECCCTTTTSSTTCCSSSCEEEECCSSS
T ss_pred HHHHhcCcCCCceE-EeCCCccEEEEEECCCC------cHHHHH-HHHHHCCcEEecCcccccCCCCCCCCeEEEEcCCC
Confidence 7654 43 245 44788899999999752 344444 455778999999 66664 2589999998 4
Q ss_pred ChHHHHHHHHHHHHHHHHhcc
Q 014603 400 EPSALEDGLGRMKAFYDRHAK 420 (422)
Q Consensus 400 ~~~~l~~~~~~l~~~~~~~~~ 420 (422)
+++++++++++|.+++++...
T Consensus 397 ~~~~i~~~~~~l~~~l~~~~~ 417 (423)
T 3ez1_A 397 PVEEVRTAMQVVAACIRLATE 417 (423)
T ss_dssp CHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999987643
No 72
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=100.00 E-value=5.9e-42 Score=326.02 Aligned_cols=363 Identities=17% Similarity=0.177 Sum_probs=282.7
Q ss_pred HHhhccCccHHHHHHHHHhhhhccCCCCceeecCCCCCC-CCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHH
Q 014603 19 ELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSA-FPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIA 97 (422)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~-~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia 97 (422)
++...+++.++.+...+... .++++|||+.|.+.. ....++++.+.+++.+++.......|++..+.+++|++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~----~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la 79 (394)
T 2ay1_A 4 NLKPQAPDKILALMGEFRAD----PRQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYAGLSGEPEFQKAMG 79 (394)
T ss_dssp GCCCCCCCSHHHHHHHHHHC----CCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCSSCCHHHHHHHH
T ss_pred cCccCCCccHHHHHHHHHhC----CCccccccccceeeCCCCCccCcHHHHHHHHHhcCCcccCCCCCCCCcHHHHHHHH
Confidence 56778888899888766554 467899999998632 1224667999999998876444557988889999999999
Q ss_pred HHHhhcCCCCCCCCCEEE--ecCHHHHHHHHHHHhcC--CCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCH
Q 014603 98 DYLNRDLPYKLSPDDVYL--TLGCTQAIEVILTVLAR--PGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDL 173 (422)
Q Consensus 98 ~~l~~~~~~~~~~~~i~~--~~g~~~a~~~~~~~l~~--~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~ 173 (422)
+++... ++++++|++ |+|+++|++.+++++.. +||+|+++.|+|+++...++..|.+++.++..+.+++.+|+
T Consensus 80 ~~~~~~---~~~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~ 156 (394)
T 2ay1_A 80 ELILGD---GLKSETTATLATVGGTGALRQALELARMANPDLRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDF 156 (394)
T ss_dssp HHHHGG---GCCGGGEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHHTCCEEEEECEETTTTEECH
T ss_pred HHHhCC---CCCcccEEEEecCCchhHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCceEEEecccccCCccCH
Confidence 998431 236789999 99999999999988754 89999999999999999999999999999886545678999
Q ss_pred HHHHHhhcCC---ceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCC-CCCCccccC-CCCCeE
Q 014603 174 DAVEALADEN---TVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNT-PFVPMGVFG-SIVPVL 248 (422)
Q Consensus 174 ~~l~~~~~~~---~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~-~~~~~~~~~-~~~~~i 248 (422)
+.+++.++++ +.++++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++. ...++..+. ..++++
T Consensus 157 ~~l~~~l~~~~~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i 236 (394)
T 2ay1_A 157 EGMKADLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVL 236 (394)
T ss_dssp HHHHHHHHTCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSEE
T ss_pred HHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHHHHHHhhcCCCEE
Confidence 9999988643 56677799999999999999999999999999999999999998776431 111222221 124689
Q ss_pred EEecCccccCCCCceeEEEEe--eCCCCcccchhHH----HHHHhhh-hhccCcchHHHHHHHHHHhhch-----HHHHH
Q 014603 249 TLGSISKRWIVPGWRLGWLVT--SDPNGILQDSGIV----DSIKSFL-NISSDPATFIQGAVPQILEKTE-----EEFFS 316 (422)
Q Consensus 249 ~i~s~sK~~~~~G~r~G~~~~--~~~~~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~-----~~~~~ 316 (422)
+++|+||.++++|+|+||+++ ++ ++++ ..+.... ..+.+++++.+.++.++|+... +.+++
T Consensus 237 ~~~s~sK~~~~~G~riG~~~~~~~~-------~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~ 309 (394)
T 2ay1_A 237 IAASCSKNFGIYRERTGCLLALCAD-------AATRELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELE 309 (394)
T ss_dssp EEEECTTTTTCGGGCEEEEEEECSS-------HHHHHHHHHHHHHHHHTTTSSCCCHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred EEEeccCCCcCcCCccceEEEEeCC-------HHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhcChHHHHHHHHHHH
Confidence 999999999889999999997 32 3333 3333222 2334568899999999887531 35788
Q ss_pred HHHHHHHHHHHHHHHHhhcCC---CCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeE
Q 014603 317 KITDILRETADICCDRLKEIP---CITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWL 393 (422)
Q Consensus 317 ~~~~~~~~~~~~l~~~L~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~i 393 (422)
+.+++++++++.+.+.|++++ ++. +..|.+|+|+|+.++ .. .+..+++++||.+.|| +
T Consensus 310 ~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~g~~~~~~~~---------~~-~~~~~l~~~gi~v~~~--------~ 370 (394)
T 2ay1_A 310 AVRSGMLRLREQLAGELRDLSGSDRFG-FVAEHRGMFSRLGAT---------PE-QVKRIKEEFGIYMVGD--------S 370 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSSTTT-HHHHCCSSEEECCCC---------HH-HHHHHHHHHCEECCTT--------C
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCee-EEcCCceEEEeeCCC---------HH-HHHHHHHhCCEEecCC--------C
Confidence 888999999999999998863 365 335677899997663 23 3456667789999885 5
Q ss_pred EEEec-cChHHHHHHHHHHHHH
Q 014603 394 RITFA-VEPSALEDGLGRMKAF 414 (422)
Q Consensus 394 Ris~~-~~~~~l~~~~~~l~~~ 414 (422)
|++++ ++++++++++++|+++
T Consensus 371 Ris~~~~~~~~i~~~~~~l~~~ 392 (394)
T 2ay1_A 371 RINIAGLNDNTIPILARAIIEV 392 (394)
T ss_dssp EEEGGGCCTTTHHHHHHHHHHH
T ss_pred eEEeecCCHhhHHHHHHHHHHc
Confidence 99998 5899999999999875
No 73
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=100.00 E-value=3.1e-41 Score=331.51 Aligned_cols=350 Identities=17% Similarity=0.244 Sum_probs=268.0
Q ss_pred ceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHH-hhcCCCCC---CCCCEEEecCHHHH
Q 014603 47 LIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYL-NRDLPYKL---SPDDVYLTLGCTQA 122 (422)
Q Consensus 47 ~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l-~~~~~~~~---~~~~i~~~~g~~~a 122 (422)
+|+|+.|.+. + +++.+.+++.+.+.. ..|+++.|.+++|+.+++.+ .+.++.++ ++++|++|+|++++
T Consensus 106 ~i~l~~g~~~----~-~~~~~~~al~~~~~~---~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~~~I~~t~G~~ea 177 (546)
T 2zy4_A 106 SLSYVRDQLG----L-DPAAFLHEMVDGILG---CNYPVPPRMLNISEKIVRQYIIREMGADAIPSESVNLFAVEGGTAA 177 (546)
T ss_dssp HHHHHHHTSC----C-CHHHHHHHHHHHHHT---CSCCSSSSCCHHHHHHHHHHHHHHTTCTTSCGGGEEEEEEEHHHHH
T ss_pred hhecccCCCC----C-CChHHHHHHHHhhhc---CCCCCCcCCHHHHHHHHHHHHHHhccCCCCCCCcceEEEECCHHHH
Confidence 7899999865 3 456777788777642 57999888999999877655 44443322 46899999999999
Q ss_pred HHHHHHH-----hcCCCCEEEecCCCccchHHHHhhC--CCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCC
Q 014603 123 IEVILTV-----LARPGANILLPRPGFPYYEARATHS--HLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNP 195 (422)
Q Consensus 123 ~~~~~~~-----l~~~gd~Vl~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~np 195 (422)
+..++++ ++++||+|++++|+|+++...+... |.+++.++.+++++|.+|++.|++.++++++++++++|+||
T Consensus 178 l~~~~~~l~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~p~NP 257 (546)
T 2zy4_A 178 MAYIFESLKLNGLLKAGDKVAIGMPVFTPYIEIPELAQYALEEVAINADPSLNWQYPDSELDKLKDPAIKIFFCVNPSNP 257 (546)
T ss_dssp HHHHHHHHHHTTSSCTTCEEEEEESCCHHHHHHHHSTTSCCEEEEEECBGGGTTBCCHHHHGGGGSTTEEEEEEESSCSS
T ss_pred HHHHHHHhhhhhcCCCCCEEEEeCCCCccHHHHHHHcCCCcEEEEEecCcccCCCCCHHHHHHhhCCCCeEEEEECCCCC
Confidence 9999987 5789999999999999998876544 57788888876667889999999888778999999999999
Q ss_pred cccccCHHHHHHHHHHH--HHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCC
Q 014603 196 CGNVYTYQHLQKIAETA--KKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPN 273 (422)
Q Consensus 196 tG~~~~~~~l~~i~~~~--~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~ 273 (422)
||.+++.+++++|+++| +++|++||+||+|+.+.++ ..++.... .++++++.||||.++++|+|+||+++++.
T Consensus 258 tG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~---~~s~~~~~-~~~~i~~~S~SK~~g~~GlRiG~~~~~~~- 332 (546)
T 2zy4_A 258 PSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFADD---FQSLFAIC-PENTLLVYSFSKYFGATGWRLGVVAAHQQ- 332 (546)
T ss_dssp SCBCCCHHHHHHHHHHHHHTCTTCEEEEECTTGGGSTT---CCCHHHHC-GGGEEEEEESTTTTTCGGGCEEEEEEESS-
T ss_pred CCccCCHHHHHHHHHHHHhccCCcEEEEeCcchhhccc---CcCHHHhC-CCCEEEEEeCccccCCCCcceEEEEECCH-
Confidence 99999999999999999 7899999999999987653 22333332 25789999999999999999999999742
Q ss_pred CcccchhHHHHHHhh-------------h------------------------hhccCcchHHHHHH-----HHHHhhch
Q 014603 274 GILQDSGIVDSIKSF-------------L------------------------NISSDPATFIQGAV-----PQILEKTE 311 (422)
Q Consensus 274 ~~~~~~~~~~~~~~~-------------~------------------------~~~~~~~~~~~~a~-----~~~l~~~~ 311 (422)
++++++... . ..+.+.+.+.|.++ .++++. .
T Consensus 333 ------~l~~~l~~~~p~~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~a~~a~~all~~-~ 405 (546)
T 2zy4_A 333 ------NVFDLALDKLQESEKVALDHRYRSLLPDVRSLKFIDRLVADSRAVALNHTAGLSTPQQVQMALFSLFALMDE-A 405 (546)
T ss_dssp ------CHHHHHHHTSCHHHHHHHHHHHTTTCSCGGGCCHHHHHHHHTTTTTTGGGCSSCHHHHHHHHHHHHHHHHCT-T
T ss_pred ------HHHHHHHhhcchhhhHHHHHHhhhccccccchhhhhhhhhhhHHHHhhccCCCCcHHHHHHHHHHHHHHHhc-c
Confidence 244444210 0 11235566777664 234443 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCccc----c-------cCCCCHHHHHHHHHHhcCeE
Q 014603 312 EEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSL----L-------EGINSDMEFALKLAKEESVI 380 (422)
Q Consensus 312 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~----~-------~~~~~~~~~~~~l~~~~gi~ 380 (422)
+.+.++.++.++++++.+.+.|. + ++. ...+.+++|+|++++... . +...++.+++.++++++||.
T Consensus 406 ~~~~~~~r~~~~~r~~~l~~~L~-~-~~~-~~~~~~~~~l~~~l~~~~~~~~~~~~~~wl~~~~~~~~~l~~ll~~~gV~ 482 (546)
T 2zy4_A 406 DEYKHTLKQLIRRRETTLYRELG-M-PPL-RDENAVDYYTLIDLQDVTAKLYGEAFSEWAVKQSSTGDMLFRIADETGIV 482 (546)
T ss_dssp CHHHHHHHHHHHHHHHHHHGGGT-S-SCC-CCTTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC-C-Ccc-cCCCCeeEEEEEEHHHhhcccccHHHHHHhhccCCHHHHHHHHHHHCCEE
Confidence 57788888999999999998886 4 344 336788899999885210 0 00013445566777888999
Q ss_pred EecCCCCCC-CCeEEEEecc-ChHHHHHHHHHHHHHHHHhc
Q 014603 381 VLPGITVGL-KDWLRITFAV-EPSALEDGLGRMKAFYDRHA 419 (422)
Q Consensus 381 v~~g~~~~~-~~~iRis~~~-~~~~l~~~~~~l~~~~~~~~ 419 (422)
+.||..|+. ++++||+++. +++++++++++|+++++++.
T Consensus 483 v~pG~~F~~~~~~iRis~~~~~~e~i~~~~~~l~~~l~~~~ 523 (546)
T 2zy4_A 483 LLPGRGFGSNRPSGRASLANLNEYEYAAIGRALRKMADELY 523 (546)
T ss_dssp CEESSCTTCSSCEEEEESSSSCHHHHHHHHHHHHHHHHHHH
T ss_pred EeCccccCCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHHH
Confidence 999999976 5689999995 88999999999999988764
No 74
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=100.00 E-value=5.8e-41 Score=317.55 Aligned_cols=379 Identities=14% Similarity=0.089 Sum_probs=273.7
Q ss_pred ccccHHHhh---ccCccHHHHHHHHHhhhhccCCCCceeecCCCCCCC-CCCCCcHHHHHHHHHHhhCCCCCCCCCCCCC
Q 014603 14 FKANEELKT---ASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAF-PSFRTASVAVDAIVHSVRSARFNCYSSTVGI 89 (422)
Q Consensus 14 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~-~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~ 89 (422)
+..++|.+. .+++.|.++.+.+++. ..+.|||++|...+. ...+..|.|++|....++......|.|..|+
T Consensus 15 m~~~~~~~~v~~~p~d~i~~l~~~~~~d-----~~~kinLgvG~y~d~~g~~~vl~~Vk~A~~~~~~~~~~~~Y~p~~G~ 89 (420)
T 4h51_A 15 MTTAERWQKIQAQAPDVIFDLAKRAAAA-----KGPKANLVIGAYRDEQGRPYPLRVVRKAEQLLLDMNLDYEYLPISGY 89 (420)
T ss_dssp CCHHHHHHTCCCCCCCHHHHHHHHHHHC-----CSSCEECCSCCCBCTTSCBCCCHHHHHHHHHHHHTTCCCCCCCTTCC
T ss_pred hhhhHHHhCCCCCCCChHHHHHHHHhcC-----CCCCEEeecCcccCCCCCCCCCHHHHHHHHHHhcCCCCCCCCCcCCh
Confidence 334445444 4567788887766553 445899999954321 2345578999998887766555579999999
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCE--EEecCHHHHHHHHHHHh----cCCCCEEEecCCCccchHHHHhhCCCe-EEEee
Q 014603 90 LPARRAIADYLNRDLPYKLSPDDV--YLTLGCTQAIEVILTVL----ARPGANILLPRPGFPYYEARATHSHLE-VRHFD 162 (422)
Q Consensus 90 ~~lr~~ia~~l~~~~~~~~~~~~i--~~~~g~~~a~~~~~~~l----~~~gd~Vl~~~~~~~~~~~~~~~~g~~-~~~~~ 162 (422)
+++|+++++++... ....+.+ +-|.|+|.|+..++..+ ..|||+|++++|+|.+|...++..|.+ +..++
T Consensus 90 p~lr~aia~~~~g~---~~~~~~~~~~qt~ggtga~~~a~~~l~~~~~~pgd~V~ip~P~w~~y~~i~~~aG~~~V~~~~ 166 (420)
T 4h51_A 90 QPFIDEAVKIIYGN---TVELENLVAVQTLSGTGAVSLGAKLLTRVFDAETTPIYLSDPTWPNHYGVVKAAGWKNICTYA 166 (420)
T ss_dssp HHHHHHHHHHHHC------CGGGEEEEEEEHHHHHHHHHHHHHTTTSCTTTSCEEEEESCCTHHHHHHHHTTCCCEEEEE
T ss_pred HHHHHHHHHHhcCC---CccccccceeeecCchHHHHHHHHHHHHhcCCCCCEEEEecCCchhHHHHHHHcCCeEEEeec
Confidence 99999999998532 2233333 45888998887766554 469999999999999999999999987 44555
Q ss_pred ccCCCCcccCHHHHHHhh---cCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCC--
Q 014603 163 LLPAKGWEVDLDAVEALA---DENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVP-- 237 (422)
Q Consensus 163 ~~~~~~~~~d~~~l~~~~---~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~-- 237 (422)
....+.+.+|.+.+.+.+ .++++++++++||||||.+++.++|++|+++|+++++++|+|++|.++.+++.....
T Consensus 167 ~~~~~~~~~d~~~~~~~l~~~~~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~~~~~~~~~ 246 (420)
T 4h51_A 167 YYDPKTVSLNFEGMKKDILAAPDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQGYASGSLDTDAYA 246 (420)
T ss_dssp CEEGGGTEECHHHHHHHHHHSCSSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHH
T ss_pred cccccccCCCHHHHHHHHhccCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhhhhhccCCcccchHH
Confidence 544556678888877655 456778888899999999999999999999999999999999999998876532111
Q ss_pred cc-ccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhh-hhccCcchHHHHHHHHHHhhch----
Q 014603 238 MG-VFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQGAVPQILEKTE---- 311 (422)
Q Consensus 238 ~~-~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~---- 311 (422)
+. ..+..++++++.||||.|+++|+|+||++++.+.... ...+..++.... ...++++...|.++..++.+..
T Consensus 247 ~~~~~~~~~~~i~~~s~SK~~~~~G~RvG~~~~~~~~~~~-~~~~~~~l~~~~r~~~s~~p~~~a~~~~~~l~d~~l~~~ 325 (420)
T 4h51_A 247 ARLFARRGIEVLLAQSFSKNMGLYSERAGTLSLLLKDKTK-RADVKSVMDSLIREEYTCPPAHGARLAHLILSNNELRKE 325 (420)
T ss_dssp HHHHHHTTCCCEEEEECTTTSCCGGGCEEEEEEECSCHHH-HHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHH
T ss_pred HHhHHhhCceEEEEeccccccccccCceEEEEecccCHHH-HHHHHHHHHHhhhcccCcchHHHHHHHHHHhcCHHHHHH
Confidence 11 1123356899999999999999999999887432100 011222222222 2345778888888888887632
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHhhcCC--C-CCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCC
Q 014603 312 -EEFFSKITDILRETADICCDRLKEIP--C-ITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITV 387 (422)
Q Consensus 312 -~~~~~~~~~~~~~~~~~l~~~L~~~~--~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~ 387 (422)
+..++..+++++++|+.+.+.|+++. + |. ...+..|+|.|+.++ . ++++ +++++||.+.|+.
T Consensus 326 ~~~~~~~m~~r~~~~R~~l~~~L~~~g~~~~~~-~i~~q~GmF~~~gls---------~-e~v~-~L~e~~Vy~~~~g-- 391 (420)
T 4h51_A 326 WEAELSAMAERIRTMRRTVYDELLRLQTPGSWE-HVINQIGMFSFLGLS---------K-AQCE-YCQNHNIFITVSG-- 391 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCT-HHHHCCSSEEECCCC---------H-HHHH-HHHHTTEECCTTC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCC-eecCCCceEEecCcC---------H-HHHH-HHHhCCEEEcCCC--
Confidence 34567778899999999999999862 1 33 235677999987663 3 3344 4578899998864
Q ss_pred CCCCeEEEEec-cChHHHHHHHHHHHHHHHHhccc
Q 014603 388 GLKDWLRITFA-VEPSALEDGLGRMKAFYDRHAKK 421 (422)
Q Consensus 388 ~~~~~iRis~~-~~~~~l~~~~~~l~~~~~~~~~~ 421 (422)
|||++ .++++|++++++|.+++++..++
T Consensus 392 ------Ris~Agl~~~ni~~~a~aI~~vvr~i~re 420 (420)
T 4h51_A 392 ------RANMAGLTHETALMLAQTINDAVRNVNRE 420 (420)
T ss_dssp ------EEEGGGCCHHHHHHHHHHHHHHHC-----
T ss_pred ------EEEeccCCHHHHHHHHHHHHHHHHHhhcC
Confidence 99998 69999999999999999887654
No 75
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=100.00 E-value=1.2e-40 Score=311.83 Aligned_cols=327 Identities=16% Similarity=0.215 Sum_probs=261.2
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 122 (422)
++.++|||+.|.+. +++++.+.+++.+.+.. ...|++..+ +++|+++++++ ++++++|++|+|++++
T Consensus 13 ~g~~~id~~~~~~~----~~~~~~v~~a~~~~~~~--~~~y~~~~~-~~lr~~la~~~------~~~~~~i~~t~g~~~a 79 (350)
T 3fkd_A 13 LSSEIVNFSTTVWT----DGDKDHLEKHLVENLNC--IRHYPEPDA-GTLRQMLAKRN------SVDNNAILVTNGPTAA 79 (350)
T ss_dssp ---CCEECSCCSCC----CSCCHHHHHHHHHTGGG--GGSCCCTTC-HHHHHHHHHHT------TCCGGGEEEESHHHHH
T ss_pred ccccEEEccCCCCC----CCCCHHHHHHHHHhHhH--HhcCCCCcH-HHHHHHHHHHh------CcCHHHEEEcCCHHHH
Confidence 46889999999855 57889999999988732 457877665 89999999998 5678899999999999
Q ss_pred HHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeec-cCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccC
Q 014603 123 IEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDL-LPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYT 201 (422)
Q Consensus 123 ~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~ 201 (422)
++.+++++. ||+|+++.|+|.++...++..|.+++.++. ++.++ +++ ++++++++++|+||||.+++
T Consensus 80 l~~~~~~l~--gd~Vi~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~--~~~--------~~~~~v~i~~p~nptG~~~~ 147 (350)
T 3fkd_A 80 FYQIAQAFR--GSRSLIAIPSFAEYEDACRMYEHEVCFYPSNEDIGE--ADF--------SNMDFCWLCNPNNPDGRLLQ 147 (350)
T ss_dssp HHHHHHHTT--TCEEEEEESCCHHHHHHHHHTTCEEEEEETTSCGGG--SCC--------TTCSEEEEESSCTTTCCCCC
T ss_pred HHHHHHHHC--CCEEEEeCCCcHHHHHHHHHcCCeEEEEecCCcccc--Ccc--------CCCCEEEEeCCCCCcCCCCC
Confidence 999999988 999999999999999999999999999987 43222 333 47889999999999999999
Q ss_pred HHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhH
Q 014603 202 YQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGI 281 (422)
Q Consensus 202 ~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~ 281 (422)
.+++.+|+++|+++ ++|+||+|+.+.+++... ...++..+++++++|+||.++++|+|+||++++ +++
T Consensus 148 ~~~l~~l~~~~~~~--~li~Dea~~~~~~~~~~~--~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~--------~~~ 215 (350)
T 3fkd_A 148 RTEILRLLNDHPDT--TFVLDQSYVSFTTEEVIR--PADIKGRKNLVMVYSFSHAYGIPGLRIGYIVAN--------KDF 215 (350)
T ss_dssp HHHHHHHHHHCTTS--EEEEECTTTTSCSSCCCC--GGGGTTCSSEEEEEESHHHHSCGGGCCEEEECC--------HHH
T ss_pred HHHHHHHHHhCCCC--EEEEECchhhhccCcchh--hHHhhcCCCEEEEecCchhccCcchheEeEEeC--------HHH
Confidence 99999999988765 999999999887665432 234445567899999999998899999999985 578
Q ss_pred HHHHHhhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCccccc
Q 014603 282 VDSIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLE 361 (422)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 361 (422)
.+++...... .+++.+.+.++..+|+... .+.++..+.. ++++.+.+.|+++|++. + .|..+.|+|+.++..
T Consensus 216 ~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~-~~~~~l~~~L~~~~~~~-~-~~~~~~~~~~~~~~~--- 287 (350)
T 3fkd_A 216 MKRVAAFSTP-WAVNALAIEAAKFILIHPA-QFTLPIRKWQ-RNTVDFITALNRLDGVE-V-HPSGTTFFLLRLKKG--- 287 (350)
T ss_dssp HHHHHTTCCT-TCSCHHHHHHHHHHHHCTT-TTCCCHHHHH-HHHHHHHHHHHHSTTEE-E-CCCSSSEEEEEESSS---
T ss_pred HHHHHHhCCC-CCCCHHHHHHHHHHHhCHH-HHHHHHHHHH-HHHHHHHHHHhcCCCcE-E-CCCCCcEEEEECCCC---
Confidence 8888776543 4778899999999987532 2334444444 88889999999888887 4 455677888888742
Q ss_pred CCCCHHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEeccChHHHHHHHHHHHHHHHHh
Q 014603 362 GINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFAVEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 362 ~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRis~~~~~~~l~~~~~~l~~~~~~~ 418 (422)
+..++...+.+++||.+.||..|+. .+++||+++ ++++++++++.|+++.+++
T Consensus 288 ---~~~~l~~~L~~~~gi~v~~g~~f~~~~~~~iRis~~-~~~~~~~l~~al~~~~~~~ 342 (350)
T 3fkd_A 288 ---TAAELKKYMLEEYNMLIRDASNFRGLDESYVRITTQ-RPAQNQLFIKALETFLEKY 342 (350)
T ss_dssp ---CHHHHHHHHHHTTCEECEECTTSTTCCTTEEEEECC-CHHHHHHHHHHHHHHHTC-
T ss_pred ---CHHHHHHHHHHHCCEEEEeCccCCCCCCCEEEEEcC-CHHHHHHHHHHHHHHHHHh
Confidence 4677777776658999999998865 689999998 5577888888888777654
No 76
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=100.00 E-value=1e-39 Score=307.68 Aligned_cols=331 Identities=18% Similarity=0.251 Sum_probs=269.4
Q ss_pred ceeecCCCCCCCCCCCCcHHHHHHHHHHhhCC--CCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHH
Q 014603 47 LIPLGHGDPSAFPSFRTASVAVDAIVHSVRSA--RFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIE 124 (422)
Q Consensus 47 ~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~ 124 (422)
.|||+.|.+. +++++.+.+++.+++... ....|++..+ .++|+++++++.+.+|.++++++|++|+|++++++
T Consensus 32 ~idl~~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~y~~~~~-~~l~~~la~~l~~~~g~~~~~~~v~~~~G~~~al~ 106 (369)
T 3cq5_A 32 DIRLNTNENP----YPPSEALVADLVATVDKIATELNRYPERDA-VELRDELAAYITKQTGVAVTRDNLWAANGSNEILQ 106 (369)
T ss_dssp SEECSSCCCC----SCCCHHHHHHHHHHHHHHGGGTTSCCCTTC-HHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHH
T ss_pred ceeccCCCCC----CCCCHHHHHHHHHHHHhcccccccCCCccH-HHHHHHHHHhhhhcccCCCChHhEEECCChHHHHH
Confidence 4999999854 578899999999888642 2457876555 89999999999887777788899999999999999
Q ss_pred HHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC-CceEEEEeCCCCCcccccCHH
Q 014603 125 VILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE-NTVALVIINPGNPCGNVYTYQ 203 (422)
Q Consensus 125 ~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~i~~p~nptG~~~~~~ 203 (422)
.++++++++||+|+++.|+|+++...++..|.+++.++.+ +++.+|++.+++.+++ +++++++++|+||||.+++.+
T Consensus 107 ~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~~~ 184 (369)
T 3cq5_A 107 QLLQAFGGPGRTALGFQPSYSMHPILAKGTHTEFIAVSRG--ADFRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLD 184 (369)
T ss_dssp HHHHHHCSTTCEEEEEESSCTHHHHHHHHTTCEEEEEECC--TTSSCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCCHH
T ss_pred HHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEecCC--cCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHH
Confidence 9999999999999999999999999999999999988864 4467899999998876 788999999999999999877
Q ss_pred HHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCC-CeEEEecCccccCCCCceeEEEEeeCCCCcccchhHH
Q 014603 204 HLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIV-PVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIV 282 (422)
Q Consensus 204 ~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~-~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 282 (422)
++.+|++ .+++++|+||+|+.+.++ . ..+...+..+ +++++.|+||.++++|+|+||++++ ++++
T Consensus 185 ~l~~l~~---~~~~~li~De~~~~~~~~-~--~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~--------~~~~ 250 (369)
T 3cq5_A 185 DVERIIN---VAPGIVIVDEAYAEFSPS-P--SATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVAN--------PAFI 250 (369)
T ss_dssp HHHHHHH---HCSSEEEEECTTGGGCCS-C--CGGGGTTTCTTTEEEEEESSSTTSCGGGCCEEEEEC--------THHH
T ss_pred HHHHHHH---hCCCEEEEECCchhhcCC-c--chHHHHhhCCCCEEEEEechHhcCCcccceEEEEeC--------HHHH
Confidence 7776666 556999999999987643 1 1122223334 6899999999998899999999986 3677
Q ss_pred HHHHhhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccccC
Q 014603 283 DSIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEG 362 (422)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 362 (422)
+.+...... .+++.+.+.++.++|+. ..++++.+++++++++.+.+.|++. ++. + .+..+.|+|+.++.
T Consensus 251 ~~l~~~~~~-~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~-~~~~~~~~~~~~~~----- 319 (369)
T 3cq5_A 251 DAVMLVRLP-YHLSALSQAAAIVALRH--SADTLGTVEKLSVERVRVAARLEEL-GYA-V-VPSESNFVFFGDFS----- 319 (369)
T ss_dssp HHHHTTSCT-TCSCHHHHHHHHHHHHT--HHHHHTHHHHHHHHHHHHHHHHHHH-TCE-E-ECCSSSEEEEECCS-----
T ss_pred HHHHHcCCC-CCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHhC-CCE-E-CCCCCeEEEEECCC-----
Confidence 777665543 36788999999999986 4578888899999999999999885 676 3 25567788888762
Q ss_pred CCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEeccChHHHHHHHHHHHHHHH
Q 014603 363 INSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALEDGLGRMKAFYD 416 (422)
Q Consensus 363 ~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~l~~~~~~l~~~~~ 416 (422)
+..++...+ .++||.+.|| +.++++||+++ +++++++++++|+++++
T Consensus 320 --~~~~l~~~l-~~~gi~v~~~---~~~~~iRis~~-~~~~i~~~~~~l~~~~~ 366 (369)
T 3cq5_A 320 --DQHAAWQAF-LDRGVLIRDV---GIAGHLRTTIG-VPEENDAFLDAAAEIIK 366 (369)
T ss_dssp --SHHHHHHHH-HHTTEECBCC---SCTTEEEEECC-CHHHHHHHHHHHHHHHT
T ss_pred --CHHHHHHHH-HHCCEEEEEC---CCCCeEEEEeC-CHHHHHHHHHHHHHHHh
Confidence 466676666 5679999998 23689999998 67899999999998764
No 77
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=100.00 E-value=3.4e-39 Score=300.38 Aligned_cols=321 Identities=18% Similarity=0.220 Sum_probs=256.9
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 122 (422)
..+.+|+|+.+... ++++|.+.+++.+.... ...|+ ..+.+++|+++++++ ++++++|++|+|++++
T Consensus 14 ~~~~~i~l~~n~~~----~~~~~~v~~a~~~~~~~--~~~y~-~~~~~~lr~~la~~~------~~~~~~i~~t~G~~~~ 80 (337)
T 3p1t_A 14 AAAQAVCLAFNENP----EAVEPRVQAAIAAAAAR--INRYP-FDAEPRVMRKLAEHF------SCPEDNLMLVRGIDEC 80 (337)
T ss_dssp CCCCCEECSSCCCC----SCCCHHHHHHHHHHGGG--TTSCC-TTHHHHHHHHHHHHH------TSCGGGEEEESHHHHH
T ss_pred CCCCceEeeCCCCC----CCCCHHHHHHHHHhhhh--hccCC-CCchHHHHHHHHHHh------CcCHHHEEEeCCHHHH
Confidence 46779999999743 67889999999998765 45785 468899999999999 5678899999999999
Q ss_pred HHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCH
Q 014603 123 IEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTY 202 (422)
Q Consensus 123 ~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~ 202 (422)
++.++.++ +||+|+++.|+|.++...++..|.+++.++.++ ++.+|++.+++. .+++++++++|+||||.++|.
T Consensus 81 l~~~~~~~--~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~--~~~~~v~i~~p~nptG~~~~~ 154 (337)
T 3p1t_A 81 FDRISAEF--SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLTD--DLLLDPNDLAQV--SRDDCVVLANPSNPTGQALSA 154 (337)
T ss_dssp HHHHHHHS--TTSEEEEESSSCSHHHHHHTTSCCEEEEECBCT--TSSBCHHHHTTC--CTTEEEEEESSCTTTCCCCCH
T ss_pred HHHHHHhc--CCCeEEEeCCCcHHHHHHHHHcCCEEEEecCCC--CCCCCHHHHHhh--cCCCEEEEeCCCCCCCCCCCH
Confidence 99999988 899999999999999999999999999888753 467999999876 467899999999999999987
Q ss_pred HHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHH
Q 014603 203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIV 282 (422)
Q Consensus 203 ~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 282 (422)
+++.+| |+++++ +|+||+|..+.+.+.. . ....+++++++|+||.|+++|+|+||++++ ++++
T Consensus 155 ~~l~~l---~~~~~~-~ivDea~~~~~~~~~~--~---~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~--------~~~~ 217 (337)
T 3p1t_A 155 GELDQL---RQRAGK-LLIDETYVDYSSFRAR--G---LAYGENELVFRSFSKSYGLAGLRLGALFGP--------SELI 217 (337)
T ss_dssp HHHHHH---HHHCSE-EEEECTTGGGSSCSSS--C---CCCBTTEEEEEESSSTTCCTTTCCEEEECC--------HHHH
T ss_pred HHHHHH---HHhCCc-EEEECCChhhcccccc--c---cccCCCEEEEeeCchhccCcchheEEEEeC--------HHHH
Confidence 776665 457776 5669999976543321 1 223356799999999998899999999986 5677
Q ss_pred HHHHhhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccccC
Q 014603 283 DSIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEG 362 (422)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 362 (422)
+.+..... ..+++.+.+.++.++|+. ..++.+..+++.++++.+.+.|+++ ++. +..+. +.|+|+..+.
T Consensus 218 ~~l~~~~~-~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~-~~~~~~~~~~----- 286 (337)
T 3p1t_A 218 AAMKRKQW-FCNVGTLDLHALEAALDN--DRAREAHIAKTLAQRRRVADALRGL-GYR-VASSE-ANFVLVENAA----- 286 (337)
T ss_dssp HHHHTTSC-TTCSCHHHHHHHHHHHTC--HHHHHHHHHHHHHHHHHHHHHHHHT-TCC-BCCCS-SSEEEEECTT-----
T ss_pred HHHHhhcC-CCCCCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHHC-cCE-ECCCC-CeEEEEEcCC-----
Confidence 77766543 346788899998888875 3446667777888889999999988 776 43444 5577776642
Q ss_pred CCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEeccChHHHHHHHHHHHHHH
Q 014603 363 INSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALEDGLGRMKAFY 415 (422)
Q Consensus 363 ~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~l~~~~~~l~~~~ 415 (422)
..++.. +++++||.+.||..|+.++++|||++ ++++++++++.|+++.
T Consensus 287 ---~~~~~~-~l~~~gi~v~~g~~~~~~~~iRis~~-~~~~~~~l~~al~~~~ 334 (337)
T 3p1t_A 287 ---GERTLR-FLRERGIQVKDAGQFGLHHHIRISIG-REEDNDRLLAALAEYS 334 (337)
T ss_dssp ---THHHHH-HHHHTTEECEEGGGGTCCSEEEEECC-CHHHHHHHHHHHHHHT
T ss_pred ---HHHHHH-HHHHCCeEEEECccCCCCCeEEEecC-CHHHHHHHHHHHHHHh
Confidence 334444 45677999999999988899999998 5788999888887764
No 78
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=100.00 E-value=3.2e-39 Score=303.35 Aligned_cols=329 Identities=17% Similarity=0.286 Sum_probs=264.3
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCC--CCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSA--RFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT 120 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~ 120 (422)
+++.+|+|+.|.+. +++++.+.+++.+.+... ....|+.. +..++|+++++++ ++++++|++|+|++
T Consensus 24 ~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~y~~~-~~~~lr~~la~~~------g~~~~~i~~t~g~~ 92 (360)
T 3hdo_A 24 DIASWIKLNTNENP----YPPSPEVVKAILEELGPDGAALRIYPSA-SSQKLREVAGELY------GFDPSWIIMANGSD 92 (360)
T ss_dssp CCTTSEECSSCCCS----SCCCHHHHHHHHHHHTTTCGGGGSCCCS-SCHHHHHHHHHHH------TCCGGGEEEESSHH
T ss_pred cccceeeccCCCCC----CCCCHHHHHHHHHHHhcccchhhcCCCC-chHHHHHHHHHHh------CcCcceEEEcCCHH
Confidence 46789999999965 688999999999998763 13467653 5799999999999 46788999999999
Q ss_pred HHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCccccc
Q 014603 121 QAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVY 200 (422)
Q Consensus 121 ~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~ 200 (422)
++++.++.+++++||+|+++.|+|+++...++..|.+++.++.+. ++.+ +.+++.+ +++++++++|+||||.++
T Consensus 93 ~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~--~~~~--~~l~~~~--~~~~v~i~~p~nptG~~~ 166 (360)
T 3hdo_A 93 EVLNNLIRAFAAEGEEIGYVHPSYSYYGTLAEVQGARVRTFGLTG--DFRI--AGFPERY--EGKVFFLTTPNAPLGPSF 166 (360)
T ss_dssp HHHHHHHHHHCCTTCEEEEESSSCTHHHHHHHHHTCEEEEECBCT--TSSB--TTCCSSB--CSSEEEEESSCTTTCCCC
T ss_pred HHHHHHHHHHhCCCCEEEEcCCChHHHHHHHHHCCCEEEEeeCCC--CCCH--HHHHhhc--CCCEEEEeCCCCCCCCCc
Confidence 999999999999999999999999999999999999999998753 3333 4444333 356889999999999999
Q ss_pred CHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchh
Q 014603 201 TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSG 280 (422)
Q Consensus 201 ~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~ 280 (422)
+.+++ .++|+++|+++|+||+|+.+. +..... ..+..++++++.|+||.|+++|+|+||++++ ++
T Consensus 167 ~~~~l---~~l~~~~~~~li~De~~~~~~--~~~~~~--~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~--------~~ 231 (360)
T 3hdo_A 167 PLEYI---DELARRCAGMLVLDETYAEFA--ESNALE--LVRRHENVVVTRTLSKSYSLAGMRIGLAIAR--------PE 231 (360)
T ss_dssp CHHHH---HHHHHHBSSEEEEECTTGGGS--SCCCTH--HHHHCSSEEEEEESTTTTSCTTSCCEEEECC--------HH
T ss_pred CHHHH---HHHHHHCCCEEEEECChHhhC--CcchhH--HhccCCCEEEEecchHhhcCCccceeeEeeC--------HH
Confidence 87665 455668999999999999853 332222 2233456899999999999999999999985 57
Q ss_pred HHHHHHhhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccc
Q 014603 281 IVDSIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLL 360 (422)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~ 360 (422)
+.+.+...... .+++++.+.++.++|+. ..++++.+++++++++.+.+.|+++ ++. + .+..+.|+|+.++..
T Consensus 232 ~~~~~~~~~~~-~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-~~~-~-~~~~~~~~~~~~~~~-- 303 (360)
T 3hdo_A 232 VIAALDKIRDH-YNLDRLAQAACVAALRD--QAYLSECCRRIRETREWFTTELRSI-GYD-V-IPSQGNYLFATPPDR-- 303 (360)
T ss_dssp HHHHHHHHSCS-CCSCHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHHHHHHHHHT-TCE-E-CCCSSSEEEEECTTC--
T ss_pred HHHHHHHhCCC-CCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCE-E-cCCCccEEEEECCCC--
Confidence 88888766543 47888999999999986 5678899999999999999999998 776 3 355677888877632
Q ss_pred cCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEeccChHHHHHHHHHHHHHHHH
Q 014603 361 EGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALEDGLGRMKAFYDR 417 (422)
Q Consensus 361 ~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~l~~~~~~l~~~~~~ 417 (422)
+..++...+ .++||.+.++..++.++++||+++ ++++++++++.|+++.+.
T Consensus 304 ----~~~~l~~~l-~~~gi~v~~~~~~~~~~~iRis~~-~~~e~~~l~~al~~~~~~ 354 (360)
T 3hdo_A 304 ----DGKRVYDGL-YARKVLVRHFSDPLLAHGMRISIG-TREEMEQTLAALKEIGEG 354 (360)
T ss_dssp ----CHHHHHHHH-HHTTEECBCCCSTTTTTSEEEECC-CHHHHHHHHHHHHHHHC-
T ss_pred ----CHHHHHHHH-HHCCEEEEECCCCCCCCEEEEEcC-CHHHHHHHHHHHHHHhcc
Confidence 566676665 567999999877656789999998 678999999998877544
No 79
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=100.00 E-value=7.3e-41 Score=317.49 Aligned_cols=330 Identities=17% Similarity=0.199 Sum_probs=254.7
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhh-C--CCCCCCCCCCCC-----HHHHHHHHHHHhhcCCCCCCC-CCE
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVR-S--ARFNCYSSTVGI-----LPARRAIADYLNRDLPYKLSP-DDV 113 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~-~--~~~~~y~~~~g~-----~~lr~~ia~~l~~~~~~~~~~-~~i 113 (422)
++.++|+|+.|.|+ ++.++.+.+++.+... . .....|++..|. +++|++++++++ ..|+.+.+ ++|
T Consensus 20 ~~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~~~~~~lr~aia~~~~-~~g~~~~~~~~i 94 (391)
T 3bwn_A 20 MSDFVVNLDHGDPT----AYEEYWRKMGDRCTVTIRGCDLMSYFSDMTNLCWFLEPELEDAIKDLHG-VVGNAATEDRYI 94 (391)
T ss_dssp TTTSCEECSSCCCG----GGHHHHHHTGGGSCEEECTTTTCSSCSCTTSSSTTSCHHHHHHHHHHHH-HHCSBCCSSSEE
T ss_pred CCCCeeEcCCCCCC----CCCCHHHHHhHHHHhhcCccchhhcCCCCCCcccccCHHHHHHHHHHHH-hcCCCCCCCCeE
Confidence 57789999999966 4555666666533321 1 134579988898 999999999998 45666666 599
Q ss_pred EEecCHHHHHHHHHHHhcCCCC----EEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEE
Q 014603 114 YLTLGCTQAIEVILTVLARPGA----NILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVI 189 (422)
Q Consensus 114 ~~~~g~~~a~~~~~~~l~~~gd----~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i 189 (422)
++|+|+++++..++++++++|| +|++++|+|..+...++..|.+++.++++.+ + +. .++++++++
T Consensus 95 ~~t~G~~~al~~~~~~l~~~Gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~-~--l~--------~~~~k~v~l 163 (391)
T 3bwn_A 95 VVGTGSTQLCQAAVHALSSLARSQPVSVVAAAPFYSTYVEETTYVRSGMYKWEGDAW-G--FD--------KKGPYIELV 163 (391)
T ss_dssp EEEEHHHHHHHHHHHHHHHTSSSSSEEEEECSSCCTHHHHHHHTTCBTTEEEEEEST-T--CC--------CCSCEEEEE
T ss_pred EEeCChHHHHHHHHHHhcCCCCCCcceEEEcCCCchhHHHHHHHcCCeEEEecCCHH-H--cC--------CCCCEEEEE
Confidence 9999999999999999999999 9999999999999999999999888877532 2 22 246889999
Q ss_pred eCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEe
Q 014603 190 INPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVT 269 (422)
Q Consensus 190 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~ 269 (422)
++|+||||.+++ +|++.++.++++||+||+|.. +. ..++.. ..+++++++||||.|+++|+|+||+++
T Consensus 164 ~~p~NPtG~~~~-----~l~~~~~~~~~~ii~De~y~~----~~-~~~l~~--~~~~~i~~~S~SK~~g~~GlRiG~~~~ 231 (391)
T 3bwn_A 164 TSPNNPDGTIRE-----TVVNRPDDDEAKVIHDFAYYW----PH-YTPITR--RQDHDIMLFTFSKITGHAGSRIGWALV 231 (391)
T ss_dssp ESSCTTTCCCCC-----CCC-----CCCEEEEECTTCS----TT-TSCCCC--CBCCSEEEEEHHHHHSCGGGCEEEEEE
T ss_pred CCCCCCCchhHH-----HHHHHhhcCCCEEEEeCCCCC----CC-CCcccc--CCCCeEEEEechhhcCCCccceEEEEe
Confidence 999999999986 344422333499999999973 21 122322 335789999999999999999999997
Q ss_pred eCCCCcccchhHHHHHHhhhh-hccCcchHHHHHHHHHHhhch---------HHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 014603 270 SDPNGILQDSGIVDSIKSFLN-ISSDPATFIQGAVPQILEKTE---------EEFFSKITDILRETADICCDRLKEIPCI 339 (422)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~---------~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 339 (422)
++ +++++++..... ...+++.+.|.++..+|+... +.++++.++.++++++.+.+.|++++++
T Consensus 232 ~~-------~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 304 (391)
T 3bwn_A 232 KD-------KEVAKKMVEYIIVNSIGVSKESQVRTAKILNVLKETCKSESESENFFKYGREMMKNRWEKLREVVKESDAF 304 (391)
T ss_dssp CC-------HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHTCSSE
T ss_pred cC-------HHHHHHHHHHhcccccCCCHHHHHHHHHHHhCcchhccccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 32 568888877664 345778899999999998642 3578889999999999999999998766
Q ss_pred CCCCC-------------CCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC-CCeEEEEeccChHHHH
Q 014603 340 TCPKK-------------PEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL-KDWLRITFAVEPSALE 405 (422)
Q Consensus 340 ~~~~~-------------~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~-~~~iRis~~~~~~~l~ 405 (422)
.+. . |.+|+|+|+.++. . +.+..+++++||.+.||..|+. ++++|||++.++++++
T Consensus 305 ~~~-~p~~~~~~f~~~~~~~~g~~~~~~~~~--------~-~~~~~~l~~~gV~v~pg~~fg~~~~~iRis~~~~~e~i~ 374 (391)
T 3bwn_A 305 TLP-KYPEAFCNYFGKSLESYPAFAWLGTKE--------E-TDLVSELRRHKVMSRAGERCGSDKKHVRVSMLSREDVFN 374 (391)
T ss_dssp ECC-CCCCEEETTTTEEECCCCSEEEEEESS--------S-CCHHHHHHHTTEECEEGGGGTCCTTEEEEESCSCHHHHH
T ss_pred ccc-cCCccccccccccCCCcceEEEecCCc--------H-HHHHHHHHHCCEEEccCCCCCCCCCEEEEEecCCHHHHH
Confidence 532 3 3445689998863 1 2344556778999999999976 6899999998889999
Q ss_pred HHHHHHHHHHHH
Q 014603 406 DGLGRMKAFYDR 417 (422)
Q Consensus 406 ~~~~~l~~~~~~ 417 (422)
+++++|++++++
T Consensus 375 ~~~~~L~~~~~~ 386 (391)
T 3bwn_A 375 VFLERLANMKLI 386 (391)
T ss_dssp HHHHHHHSCC--
T ss_pred HHHHHHHHHHHh
Confidence 999999987754
No 80
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=100.00 E-value=1.3e-40 Score=318.80 Aligned_cols=332 Identities=14% Similarity=0.157 Sum_probs=264.7
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCC--CCCCCC-C---CHHHHHHHHHHHhhcCCCCCCCCCEEEe
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFN--CYSSTV-G---ILPARRAIADYLNRDLPYKLSPDDVYLT 116 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~--~y~~~~-g---~~~lr~~ia~~l~~~~~~~~~~~~i~~~ 116 (422)
.+..+|+|+.|.|. +++++.+.+++.+.+...... .|++.. | .+++|+++++++++..+..+++++|++|
T Consensus 54 ~~~~~i~l~~g~~~----~~~~~~v~~a~~~~l~~~~~~~~~Y~~~~~G~~~~~~lr~aia~~~~~~~~~~~~~~~iv~t 129 (427)
T 2hox_A 54 IQGCSADVASGDGL----FLEEYWKQHKEASAVLVSPWHRMSYFFNPVSNFISFELEKTIKELHEVVGNAAAKDRYIVFG 129 (427)
T ss_dssp CTTCCEECCSCCCG----GGHHHHTTSHHHHCEEECTTTTCSSSCSSCCTTCCHHHHHHHHHHHHHHTCBCCTTCEEEEE
T ss_pred CCCceEEecCcCCC----CCCCHHHHHhHHhhhhcCCcccccCCCCCCCccchHHHHHHHHHHHHHhCCcCCCCCEEEEe
Confidence 35578999999965 566778888888877322222 488877 8 9999999999998766656788999999
Q ss_pred cCHHHHHHHHHHHh--------cCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEE
Q 014603 117 LGCTQAIEVILTVL--------ARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALV 188 (422)
Q Consensus 117 ~g~~~a~~~~~~~l--------~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~ 188 (422)
+|++++++.++.++ +++||+|+++.|+|..+...++..|.+++. +.+|++.|++.+++++++++
T Consensus 130 ~G~~~al~~~~~~l~~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~g~~~~~--------~~~d~~~l~~~~~~~~k~v~ 201 (427)
T 2hox_A 130 VGVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFREQTKYFDKKGYV--------WAGNAANYVNVSNPEQYIEM 201 (427)
T ss_dssp SHHHHHHHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHHHHHHHHSCBTTEE--------EEEEGGGGTTCSCGGGEEEE
T ss_pred CCHHHHHHHHHHHHhhccccccCCCCCEEEEeCCCcccHHHHHHHcCCeeee--------ecCCHHHHHHhhcCCceEEE
Confidence 99999999999999 899999999999999999999999987663 34677888888877889999
Q ss_pred EeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEE
Q 014603 189 IINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLV 268 (422)
Q Consensus 189 i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~ 268 (422)
+++|+||||.+++ +.+ + ++..+.|+++.. + ..++..+. .+++++++||||.++++|+|+||++
T Consensus 202 l~~p~NPtG~~~~-~~l-------~--~~~~i~d~~~~~----~--~~s~~~~~-~~~~i~~~S~SK~~g~~G~RiG~~~ 264 (427)
T 2hox_A 202 VTSPNNPEGLLRH-AVI-------K--GCKSIYDMVYYW----P--HYTPIKYK-ADEDILLFTMSKFTGHSGSRFGWAL 264 (427)
T ss_dssp EESSCTTTCCCCC-CSS-------T--TCEEEEECTTCS----T--TTSCCCSC-BCCSEEEEEHHHHTSCGGGCCEEEE
T ss_pred EcCCCCCcccccH-HHH-------c--CCCEEEeecccC----C--CCCccccC-CCceEEEEeChhcCCCCCceEEEEE
Confidence 9999999999998 422 2 566788877642 1 12333333 4578999999999999999999999
Q ss_pred eeCCCCcccchhHHHHHHhhhhh-ccCcchHHHHHHHHHHhhch----------HHHHHHHHHHHHHHHHHHHHHhhcCC
Q 014603 269 TSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQGAVPQILEKTE----------EEFFSKITDILRETADICCDRLKEIP 337 (422)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~----------~~~~~~~~~~~~~~~~~l~~~L~~~~ 337 (422)
+++ +++++++...... ..+++.+.|.++..+|+... +.++++.+++++++++.+.+.|++++
T Consensus 265 ~~~-------~~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 337 (427)
T 2hox_A 265 IKD-------ESVYNNLLNYMTKNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSD 337 (427)
T ss_dssp ECC-------HHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTSS
T ss_pred ECC-------HHHHHHHHHHHHhcCCCCCHHHHHHHHHHhhcchhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 853 5688888776643 35778899999888887531 24566788899999999999999886
Q ss_pred CCCC-------------CCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC-CCeEEEEeccChHH
Q 014603 338 CITC-------------PKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL-KDWLRITFAVEPSA 403 (422)
Q Consensus 338 ~~~~-------------~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~-~~~iRis~~~~~~~ 403 (422)
++.+ +..|.+|+|+|++++. +..++...+++++||.+.||..|+. ++++|||++.++++
T Consensus 338 g~~~~~~~~~~~~~~~~~~~p~~g~f~~~~~~~-------~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~Ris~~~~~e~ 410 (427)
T 2hox_A 338 RFSYQELPQSEYCNYFRRMRPPSPSYAWVKCEW-------EEDKDCYQTFQNGRINTQNGVGFEASSRYVRLSLIKTQDD 410 (427)
T ss_dssp SEECCCCCSCEEETTTTEEECCCCSEEEEEECS-------GGGCSHHHHHHHTTEECEEGGGGTSCTTEEEEECSSCHHH
T ss_pred CccccccccccccccccccCCCCceEEEEECCC-------cHHHHHHHHHHHCCEEEcCCCccCCCCCEEEEEecCCHHH
Confidence 6652 1145668999999864 2345667777778999999998876 78999999998999
Q ss_pred HHHHHHHHHHHHHH
Q 014603 404 LEDGLGRMKAFYDR 417 (422)
Q Consensus 404 l~~~~~~l~~~~~~ 417 (422)
|++++++|.+++++
T Consensus 411 l~~~l~~l~~~~~~ 424 (427)
T 2hox_A 411 FDQLMYYLKDMVKA 424 (427)
T ss_dssp HHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999998754
No 81
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=100.00 E-value=1.8e-38 Score=295.29 Aligned_cols=316 Identities=20% Similarity=0.270 Sum_probs=253.1
Q ss_pred CCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHH
Q 014603 45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIE 124 (422)
Q Consensus 45 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~ 124 (422)
.++|+|+.|.+. +++++.+.+++.+.+.......|+. .+.+++|+++++++++. .+++++|++|+|++++++
T Consensus 19 ~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~y~~-~~~~~lr~~la~~~~~~---~~~~~~v~~~~G~~~al~ 90 (335)
T 1uu1_A 19 RDKTYLALNENP----FPFPEDLVDEVFRRLNSDALRIYYD-SPDEELIEKILSYLDTD---FLSKNNVSVGNGADEIIY 90 (335)
T ss_dssp CCSEEESSCCCS----SCCCHHHHHHHHHTCCGGGGGSCCC-SSCHHHHHHHHHHHTCS---SCCGGGEEEESSHHHHHH
T ss_pred CcceECCCCCCC----CCCCHHHHHHHHHHhhhhhhhcCCC-CchHHHHHHHHHHcCCC---CCCHHHEEEcCChHHHHH
Confidence 468999999854 5678999999999874333456765 36899999999999532 257789999999999999
Q ss_pred HHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHH
Q 014603 125 VILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQH 204 (422)
Q Consensus 125 ~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~ 204 (422)
.+++++ ||+|+++ |+|+++...++..|.+++.++.+ +++.+|++.+ ++++++++++|+||||.+++.++
T Consensus 91 ~~~~~~---gd~Vl~~-p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l-----~~~~~v~l~~p~nptG~~~~~~~ 159 (335)
T 1uu1_A 91 VMMLMF---DRSVFFP-PTYSCYRIFAKAVGAKFLEVPLT--KDLRIPEVNV-----GEGDVVFIPNPNNPTGHVFEREE 159 (335)
T ss_dssp HHHHHS---SEEEECS-SSCHHHHHHHHHHTCEEEECCCC--TTSCCCCCCC-----CTTEEEEEESSCTTTCCCCCHHH
T ss_pred HHHHHh---CCcEEEC-CCcHHHHHHHHHcCCeEEEeccC--CCCCCCHHHc-----CCCCEEEEeCCCCCCCCCCCHHH
Confidence 999998 8999999 99999999999999999888874 3456787776 46889999999999999999999
Q ss_pred HHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHH
Q 014603 205 LQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDS 284 (422)
Q Consensus 205 l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~ 284 (422)
+++|+++| | ++|+||+|+.+.+. .. +..++..+++++++|+||.|+++|+|+||++++ ++++++
T Consensus 160 l~~l~~~~---~-~li~De~~~~~~~~--~~--~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~--------~~~~~~ 223 (335)
T 1uu1_A 160 IERILKTG---A-FVALDEAYYEFHGE--SY--VDFLKKYENLAVIRTFSKAFSLAAQRVGYVVAS--------EKFIDA 223 (335)
T ss_dssp HHHHHHTT---C-EEEEECTTHHHHCC--CC--GGGGGTCSSEEEEEESTTTTTCGGGCCEEEEEC--------HHHHHH
T ss_pred HHHHHHhC---C-EEEEECcchhhcch--hH--HHHhhhCCCEEEEecchhhcCCcccCeEEEEeC--------HHHHHH
Confidence 99998877 7 89999999976532 11 222333456899999999998899999999985 567777
Q ss_pred HHhhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccccCCC
Q 014603 285 IKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGIN 364 (422)
Q Consensus 285 ~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 364 (422)
+...... .+++.+.+.++.++|+. ..++++.+++++++++.+.+.|+++ ++. + .|.+++|+|+.++..
T Consensus 224 l~~~~~~-~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~-~~~~~~~~~~~~~~~------ 291 (335)
T 1uu1_A 224 YNRVRLP-FNVSYVSQMFAKVALDH--REIFEERTKFIVEERERMKSALREM-GYR-I-TDSRGNFVFVFMEKE------ 291 (335)
T ss_dssp HHHHSCT-TCSCHHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHHHHHHHHH-TCC-B-CCCCSSEEEEECCTH------
T ss_pred HHHhcCC-CCcCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHHC-CcE-E-cCCCCeEEEEECCCC------
Confidence 7765533 47888999999999986 4578888899999999999999987 665 3 466678999888631
Q ss_pred CHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEeccChHHHHHHHHHHHHH
Q 014603 365 SDMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALEDGLGRMKAF 414 (422)
Q Consensus 365 ~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~l~~~~~~l~~~ 414 (422)
+..++...+. ++||.+.|+ .+++|+|++. ++++++++++|+++
T Consensus 292 ~~~~~~~~l~-~~gi~v~~~-----~~~iRis~~~-~~~i~~~~~~l~~~ 334 (335)
T 1uu1_A 292 EKERLLEHLR-TKNVAVRSF-----REGVRITIGK-REENDMILRELEVF 334 (335)
T ss_dssp HHHHHHHHHH-HHTEEEEEE-----TTEEEEECCC-HHHHHHHHHHHHCC
T ss_pred CHHHHHHHHH-HCCEEEEEC-----CCeEEEEeCC-HHHHHHHHHHHHhh
Confidence 3456666665 569999982 5789999975 46799999988753
No 82
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=100.00 E-value=1.1e-36 Score=290.15 Aligned_cols=338 Identities=14% Similarity=0.139 Sum_probs=259.7
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCC--CCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSA--RFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT 120 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~ 120 (422)
++..+|||+.|.+ +++++++.+.+++.+.+... ....|.+..|..++++.+++++.+.+| .+++++|+|++
T Consensus 41 ~g~~~idl~~~~~---~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~~v~~~~ggt 113 (398)
T 3a2b_A 41 DGRRVLMFGSNSY---LGLTTDTRIIKAAQDALEKYGTGCAGSRFLNGTLDIHVELEEKLSAYVG----KEAAILFSTGF 113 (398)
T ss_dssp TTEEEEECSCSCT---TCGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHT----CSEEEEESSHH
T ss_pred CCceEEEeecccc---cCCCCCHHHHHHHHHHHHHcCCCCCCcCcccCCcHHHHHHHHHHHHHhC----CCcEEEECCHH
Confidence 4667899999975 13557899999999887642 223455566777888888888776554 35899999999
Q ss_pred HHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC----CceEEEEeCCCCCc
Q 014603 121 QAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE----NTVALVIINPGNPC 196 (422)
Q Consensus 121 ~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~----~~~~i~i~~p~npt 196 (422)
+|+..++++++++||.|+++.|+|..+...++..|.+++.++. .|++.|++.+++ +++++++++|+|||
T Consensus 114 ~a~~~~~~~~~~~gd~V~~~~p~~~~~~~~~~~~g~~~~~v~~-------~d~~~l~~~l~~~~~~~~~~v~~~~~~npt 186 (398)
T 3a2b_A 114 QSNLGPLSCLMGRNDYILLDERDHASIIDGSRLSFSKVIKYGH-------NNMEDLRAKLSRLPEDSAKLICTDGIFSME 186 (398)
T ss_dssp HHHHHHHHHSSCTTCEEEEETTCCHHHHHHHHHSSSEEEEECT-------TCHHHHHHHHHTSCSSSCEEEEEESBCTTT
T ss_pred HHHHHHHHHHhCCCCEEEECCccCHHHHHHHHHcCCceEEeCC-------CCHHHHHHHHHhhccCCceEEEEeCCCCCC
Confidence 9999999999999999999999999999999999999888874 478999988866 68899999999999
Q ss_pred ccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCC-eEEEecCccccCCCCceeEEEEeeCCCCc
Q 014603 197 GNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP-VLTLGSISKRWIVPGWRLGWLVTSDPNGI 275 (422)
Q Consensus 197 G~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~-~i~i~s~sK~~~~~G~r~G~~~~~~~~~~ 275 (422)
|.+++ +++|.++|+++|+++|+||+|+.+.++..........+..++ +++++|+||+++++| ||++++
T Consensus 187 G~~~~---~~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~~~G---G~~~~~----- 255 (398)
T 3a2b_A 187 GDIVN---LPELTSIANEFDAAVMVDDAHSLGVIGHKGAGTASHFGLNDDVDLIMGTFSKSLASLG---GFVAGD----- 255 (398)
T ss_dssp CCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSSC---EEEEEC-----
T ss_pred CCccC---HHHHHHHHHHcCcEEEEECCCcccccCCCCCchHhhcCCCcCCeEEEecccccccCCC---cEEEeC-----
Confidence 99975 788899999999999999999876553211111111222234 599999999998778 999985
Q ss_pred ccchhHHHHHHhh-h-hhccCcchHHHH-HHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEE
Q 014603 276 LQDSGIVDSIKSF-L-NISSDPATFIQG-AVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVM 352 (422)
Q Consensus 276 ~~~~~~~~~~~~~-~-~~~~~~~~~~~~-a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~ 352 (422)
+++++.+... . ....+.+.+.+. ++.++|+.. .++++.+++++++++.+.+.|+++ ++. +..|. |+++|
T Consensus 256 ---~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~-g~~~~ 327 (398)
T 3a2b_A 256 ---ADVIDFLKHNARSVMFSASMTPASVASTLKALEII--QNEPEHIEKLWKNTDYAKAQLLDH-GFD-LGATE-SPILP 327 (398)
T ss_dssp ---HHHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHH--HHCTHHHHHHHHHHHHHHHHHHHT-TCC-BCSCC-SSEEE
T ss_pred ---HHHHHHHHHhcccceecCCCCHHHHHHHHHHHHHH--hhCHHHHHHHHHHHHHHHHHHHhc-CCC-cCCCC-CCEEE
Confidence 4677777664 2 222334445554 556777652 346678889999999999999988 776 33444 78899
Q ss_pred EecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC---CCeEEEEec--cChHHHHHHHHHHHHHHHHhc
Q 014603 353 VKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL---KDWLRITFA--VEPSALEDGLGRMKAFYDRHA 419 (422)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~---~~~iRis~~--~~~~~l~~~~~~l~~~~~~~~ 419 (422)
+.++... +..++...+.++ ||.+.||..|.. .+++||+++ ++++++++++++|+++++++.
T Consensus 328 ~~~~~~~-----~~~~l~~~l~~~-gi~v~~~~~~~~~~~~~~iRis~~~~~~~e~i~~~~~~l~~~l~~~~ 393 (398)
T 3a2b_A 328 IFIRSNE-----KTFWVTKMLQDD-GVFVNPVVSPAVPAEESLIRFSLMATHTYDQIDEAIEKMVKVFKQAE 393 (398)
T ss_dssp EECCCHH-----HHHHHHHHHHHT-TEECEEECTTTSCGGGCEEEEECCTTCCHHHHHHHHHHHHHHHHHCC
T ss_pred EEcCCHH-----HHHHHHHHHHHC-CcEEEeeCCCCCCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHHhC
Confidence 9886321 345666666555 999999988753 579999998 589999999999999998754
No 83
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=100.00 E-value=2.7e-36 Score=289.39 Aligned_cols=336 Identities=15% Similarity=0.211 Sum_probs=254.7
Q ss_pred CCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCC------CCCCCC--CCCCHHHHHHHHHHHhhcCCCCC-CCCCEE
Q 014603 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSAR------FNCYSS--TVGILPARRAIADYLNRDLPYKL-SPDDVY 114 (422)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~------~~~y~~--~~g~~~lr~~ia~~l~~~~~~~~-~~~~i~ 114 (422)
++++|+|+.|.++ +.|+.+.+++.+++.... ...|++ ..+..++|++++++++ . ++++++
T Consensus 26 g~~~i~l~~~~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~~------~~~~~~v~ 94 (420)
T 1t3i_A 26 GHPLVYLDNAATS-----QKPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFIN------ARSPREIV 94 (420)
T ss_dssp TEECEECBTTTCC-----CCCHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHTT------CSCGGGEE
T ss_pred CCceEEecCCccC-----CCCHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHHHHHHHHHcC------CCCCCeEE
Confidence 4568999999854 567899999999886521 123443 3567889999999983 3 568999
Q ss_pred EecCHHHHHHHHHHHh----cCCCCEEEecCCCccc----hHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceE
Q 014603 115 LTLGCTQAIEVILTVL----ARPGANILLPRPGFPY----YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVA 186 (422)
Q Consensus 115 ~~~g~~~a~~~~~~~l----~~~gd~Vl~~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~ 186 (422)
+|+|+++|++.++.++ +++||+|+++.|+|++ +...++..|.+++.++.+ .++.+|++.+++.+++++++
T Consensus 95 ~~~g~t~a~~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~l~~~~~~ 172 (420)
T 1t3i_A 95 YTRNATEAINLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLD--EQESFDLEHFKTLLSEKTKL 172 (420)
T ss_dssp EESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBC--TTSSBCHHHHHHHCCTTEEE
T ss_pred EcCChHHHHHHHHHHhhhcccCCCCEEEECcchhHHHHHHHHHHHHhcCcEEEEeccC--CCCCcCHHHHHHhhCCCceE
Confidence 9999999999999999 8999999999999998 556677789999988875 45668999999999888999
Q ss_pred EEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEE
Q 014603 187 LVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGW 266 (422)
Q Consensus 187 i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~ 266 (422)
+++++|+||||.+++ +++|.++|+++|+++|+|++|+.... ...+..++ ..+++.|+||.++++| +||
T Consensus 173 v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~~~~----~~~~~~~~---~di~~~s~sK~~~~~g--~G~ 240 (420)
T 1t3i_A 173 VTVVHISNTLGCVNP---AEEIAQLAHQAGAKVLVDACQSAPHY----PLDVQLID---CDWLVASGHKMCAPTG--IGF 240 (420)
T ss_dssp EEEESBCTTTCBBCC---HHHHHHHHHHTTCEEEEECTTTTTTS----CCCHHHHT---CSEEEEEGGGTTSCTT--CEE
T ss_pred EEEeCCcccccCcCC---HHHHHHHHHHcCCEEEEEhhhccCCc----cCchhhcC---CCEEEEehhhhcCCCc--eEE
Confidence 999999999999987 78889999999999999999986321 11233333 3488999999887777 899
Q ss_pred EEeeCCCCcccchhHHHHHHhhhh---------------------hccCcchHHHHHHHH-HHhhchHHHHHHHHHHHHH
Q 014603 267 LVTSDPNGILQDSGIVDSIKSFLN---------------------ISSDPATFIQGAVPQ-ILEKTEEEFFSKITDILRE 324 (422)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~a~~~-~l~~~~~~~~~~~~~~~~~ 324 (422)
++++ +++.+++..... +..+.+.+.+.++.. +++...+.++++..+++++
T Consensus 241 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~ 312 (420)
T 1t3i_A 241 LYGK--------EEILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIHNYEVE 312 (420)
T ss_dssp EEEC--------HHHHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred EEEc--------hHHHhhcCceecCCCccccccccccCCCCchhhccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 9986 467666654321 112344455554443 5554333457788899999
Q ss_pred HHHHHHHHhhcCCCCCCCCCCC-----CceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCC--------CCCC
Q 014603 325 TADICCDRLKEIPCITCPKKPE-----GSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITV--------GLKD 391 (422)
Q Consensus 325 ~~~~l~~~L~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~--------~~~~ 391 (422)
+++.+.+.|++++++.+. .|. .+.++++.++.. +..++... +.++||.+.+|..| +..+
T Consensus 313 ~~~~l~~~L~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~------~~~~~~~~-l~~~gi~v~~~~~~~~~~~~~~g~~~ 384 (420)
T 1t3i_A 313 LTHYLWQGLGQIPQLRLY-GPNPKHGDRAALASFNVAGL------HASDVATM-VDQDGIAIRSGHHCTQPLHRLFDASG 384 (420)
T ss_dssp HHHHHHHHHHTCTTEEEE-SCCGGGSCBCSEEEEEETTB------CHHHHHHH-HHTTTEECBCSCTTCHHHHHHTTCCC
T ss_pred HHHHHHHHHHhCCCeEEe-CCCccccccCCEEEEEECCC------CHHHHHHH-HHHCCeEEeeccccchHHHHhcCCCC
Confidence 999999999998887733 443 244555566531 45566554 56779999998644 3368
Q ss_pred eEEEEec--cChHHHHHHHHHHHHHHHHhcc
Q 014603 392 WLRITFA--VEPSALEDGLGRMKAFYDRHAK 420 (422)
Q Consensus 392 ~iRis~~--~~~~~l~~~~~~l~~~~~~~~~ 420 (422)
++||+++ ++++++++++++|+++++++++
T Consensus 385 ~iRis~~~~~~~~~i~~~~~~l~~~~~~~~~ 415 (420)
T 1t3i_A 385 SARASLYFYNTKEEIDLFLQSLQATIRFFSD 415 (420)
T ss_dssp CEEEECCTTCCHHHHHHHHHHHHHHHHHTC-
T ss_pred eEEEecCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 9999998 5899999999999999887643
No 84
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=100.00 E-value=1.8e-36 Score=289.19 Aligned_cols=334 Identities=16% Similarity=0.183 Sum_probs=251.6
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCC--CCC------CCCCCCCHHHHHHHHHHHhhcCCCCC-CCCCE
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSAR--FNC------YSSTVGILPARRAIADYLNRDLPYKL-SPDDV 113 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~------y~~~~g~~~lr~~ia~~l~~~~~~~~-~~~~i 113 (422)
+|.++++|+.+.++ +.++.+.+++.+++.... ... |.+..+..++|++++++++ . ++++|
T Consensus 20 ~g~~~i~l~~~~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~------~~~~~~v 88 (406)
T 1kmj_A 20 NGLPLAYLDSAASA-----QKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFIN------ARSAEEL 88 (406)
T ss_dssp TTEECEECCTTTCC-----CCCHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHTT------CSCGGGE
T ss_pred CCCceEEecCCccC-----CCCHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHcC------CCCCCeE
Confidence 35578999999854 467899999999887531 111 2234567889999999983 3 56899
Q ss_pred EEecCHHHHHHHHHHHh----cCCCCEEEecCCCccch----HHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCce
Q 014603 114 YLTLGCTQAIEVILTVL----ARPGANILLPRPGFPYY----EARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTV 185 (422)
Q Consensus 114 ~~~~g~~~a~~~~~~~l----~~~gd~Vl~~~~~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~ 185 (422)
++|+|+++|++.++.++ +++||+|+++.|+|++. ...++..|.+++.++.++ ++.+|++.|++.++++++
T Consensus 89 ~~~~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~d~~~l~~~l~~~~~ 166 (406)
T 1kmj_A 89 VFVRGTTEGINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNP--DGTLQLETLPTLFDEKTR 166 (406)
T ss_dssp EEESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBCT--TSCBCGGGHHHHCCTTEE
T ss_pred EEeCChhHHHHHHHHHhhhhcCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEEecCC--CCCcCHHHHHHHhccCCe
Confidence 99999999999999999 89999999999999764 344666799999888753 456899999999988899
Q ss_pred EEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeE
Q 014603 186 ALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLG 265 (422)
Q Consensus 186 ~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G 265 (422)
++++++|+||||.+++ +++|.++|+++|+++|+|++|+... ....+...+ ..+++.|+||.++++| +|
T Consensus 167 ~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~~~~~g~----~~~~~~~~~---~d~~~~s~~K~~g~~G--~G 234 (406)
T 1kmj_A 167 LLAITHVSNVLGTENP---LAEMITLAHQHGAKVLVDGAQAVMH----HPVDVQALD---CDFYVFSGHKLYGPTG--IG 234 (406)
T ss_dssp EEEEESBCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTTTTT----SCCCHHHHT---CSEEEEEGGGTTSCTT--CE
T ss_pred EEEEeCCCccccCcCC---HHHHHHHHHHcCCEEEEEchhhcCC----CCCcccccC---CCEEEEEchhccCCCC--cE
Confidence 9999999999999987 8888999999999999999998632 111222222 3488999999987777 89
Q ss_pred EEEeeCCCCcccchhHHHHHHhhhh----------------------hccCcchHHHHHHH-HHHhhchHHHHHHHHHHH
Q 014603 266 WLVTSDPNGILQDSGIVDSIKSFLN----------------------ISSDPATFIQGAVP-QILEKTEEEFFSKITDIL 322 (422)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~a~~-~~l~~~~~~~~~~~~~~~ 322 (422)
|++++ +++++++..... ...+.+.+.+.++. ++++...+.++++..+++
T Consensus 235 ~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~ 306 (406)
T 1kmj_A 235 ILYVK--------EALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYE 306 (406)
T ss_dssp EEEEC--------HHHHHHCCCSSCSTTSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred EEEEe--------HHHHhhcCCcccCCCceeecccccccccCCCchhccCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHH
Confidence 99986 467666654321 11223445555444 566543344677888999
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCC--CCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCC--------CCCCe
Q 014603 323 RETADICCDRLKEIPCITCPKKP--EGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITV--------GLKDW 392 (422)
Q Consensus 323 ~~~~~~l~~~L~~~~~~~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~--------~~~~~ 392 (422)
+++++.+.+.|+++|++.+. .+ .++ ++++.++. .+..++...+ .++||.+.+|..| +.+++
T Consensus 307 ~~~~~~l~~~L~~~~~~~~~-~~~~~~~-~~~~~~~~------~~~~~~~~~l-~~~gi~v~~g~~~~~~~~~~~g~~~~ 377 (406)
T 1kmj_A 307 QNLMHYALSQLESVPDLTLY-GPQNRLG-VIAFNLGK------HHAYDVGSFL-DNYGIAVRTGHHCAMPLMAYYNVPAM 377 (406)
T ss_dssp HHHHHHHHHHHTTSTTEEEE-SCTTCCS-EEEEEETT------CCHHHHHHHH-HHTTEECEEECTTCHHHHHHTTCSCE
T ss_pred HHHHHHHHHHHhcCCCeEEe-cCCCcCC-EEEEEECC------CCHHHHHHHH-hhCCcEEEeccccchHHHHhcCCCCe
Confidence 99999999999998887733 45 545 44445642 1456666544 6779999998754 33689
Q ss_pred EEEEec--cChHHHHHHHHHHHHHHHHh
Q 014603 393 LRITFA--VEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 393 iRis~~--~~~~~l~~~~~~l~~~~~~~ 418 (422)
+||+++ +++++++++++.|+++++.+
T Consensus 378 iRis~~~~~t~~~i~~~~~~l~~~~~~l 405 (406)
T 1kmj_A 378 CRASLAMYNTHEEVDRLVTGLQRIHRLL 405 (406)
T ss_dssp EEEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeecCCCHHHHHHHHHHHHHHHHhh
Confidence 999998 48999999999999988764
No 85
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=100.00 E-value=1.3e-35 Score=282.06 Aligned_cols=318 Identities=13% Similarity=0.128 Sum_probs=247.2
Q ss_pred CCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCC-CEEEecCHHHHHHHHHHHhcCCCCEEEec
Q 014603 62 RTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPD-DVYLTLGCTQAIEVILTVLARPGANILLP 140 (422)
Q Consensus 62 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~ 140 (422)
+.++.+.+++.+.+.. .|++. ..++++.+++++.+.+| ++++ ++++|+|+++|++.++.+++++||+|+++
T Consensus 44 ~~~~~v~~a~~~~~~~----~~~~~--~~~~~~~~~~~la~~~g--~~~~~~v~~t~g~t~al~~~~~~~~~~gd~Vl~~ 115 (393)
T 1vjo_A 44 NAHPSVLQAMNVSPVG----HLDPA--FLALMDEIQSLLRYVWQ--TENPLTIAVSGTGTAAMEATIANAVEPGDVVLIG 115 (393)
T ss_dssp CCCHHHHHHHSSCCCC----TTSHH--HHHHHHHHHHHHHHHHT--CCCSCEEEESSCHHHHHHHHHHHHCCTTCEEEEE
T ss_pred CCCHHHHHHHhccccc----ccCHH--HHHHHHHHHHHHHHHhC--CCCCcEEEEeCchHHHHHHHHHhccCCCCEEEEE
Confidence 6678899988876543 45432 34666666666666554 4567 89999999999999999999999999999
Q ss_pred CCCccc--hHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC-CceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCc
Q 014603 141 RPGFPY--YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE-NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGI 217 (422)
Q Consensus 141 ~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~ 217 (422)
+|+|++ +...++..|.+++.++.++ ++.+|++.|++.+++ +++++++++|+||||.+++ +++|.++|+++|+
T Consensus 116 ~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~ 190 (393)
T 1vjo_A 116 VAGYFGNRLVDMAGRYGADVRTISKPW--GEVFSLEELRTALETHRPAILALVHAETSTGARQP---LEGVGELCREFGT 190 (393)
T ss_dssp ESSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHHHTC
T ss_pred cCChhHHHHHHHHHHcCCceEEEecCC--CCCCCHHHHHHHHhhCCceEEEEeccCCCcceecc---HHHHHHHHHHcCC
Confidence 999998 8888888999999998754 456899999999887 8899999999999999975 7888999999999
Q ss_pred EEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhh------h--
Q 014603 218 MVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSF------L-- 289 (422)
Q Consensus 218 ~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~------~-- 289 (422)
++|+|++|+. +.....+... +..+++.|+||+++++| |+||++++ +++++++... .
T Consensus 191 ~li~Dea~~~----g~~~~~~~~~---~~di~~~s~sK~l~~~~-~~G~l~~~--------~~~~~~~~~~~~~~~~~~~ 254 (393)
T 1vjo_A 191 LLLVDTVTSL----GGVPIFLDAW---GVDLAYSCSQKGLGCSP-GASPFTMS--------SRAIEKLQRRRTKVANWYL 254 (393)
T ss_dssp EEEEECTTTT----TTSCCCTTTT---TCSEEECCSSSTTCSCS-SCEEEEEC--------HHHHHHHHTCSSCCSCSTT
T ss_pred EEEEECCccc----cCcCCccccc---CccEEEEcCcccccCCC-ceEEEEEC--------HHHHHHHhccCCCCCceec
Confidence 9999999983 2222222222 33588999999988887 99999986 4566666321 0
Q ss_pred ------------hhcc-CcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCC---ceEEEE
Q 014603 290 ------------NISS-DPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEG---SMFVMV 353 (422)
Q Consensus 290 ------------~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~---g~~~~~ 353 (422)
.... +++.+.+.++.++++...+.++++.+++++++++.+.+.|+++ ++.+. .|.+ +.++++
T Consensus 255 ~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~ 332 (393)
T 1vjo_A 255 DMNLLGKYWGSERVYHHTAPINLYYALREALRLIAQEGLANCWQRHQKNVEYLWERLEDI-GLSLH-VEKEYRLPTLTTV 332 (393)
T ss_dssp CHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBS-SCGGGBCSSEEEE
T ss_pred CcHhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHc-CCccc-CCccccCCcEEEE
Confidence 1122 6788889998888886444567888999999999999999988 77733 4543 356777
Q ss_pred ecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEe-c--cChHHHHHHHHHHHHHH
Q 014603 354 KLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITF-A--VEPSALEDGLGRMKAFY 415 (422)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~-~--~~~~~l~~~~~~l~~~~ 415 (422)
.++.. .+..++...+.+++||.+.||..|..++++||++ + ++++++++++++|++++
T Consensus 333 ~~~~~-----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~~~~i~~~~~~l~~~l 392 (393)
T 1vjo_A 333 CIPDG-----VDGKAVARRLLNEHNIEVGGGLGELAGKVWRVGLMGFNSRKESVDQLIPALEQVL 392 (393)
T ss_dssp ECCTT-----CCHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHH
T ss_pred EcCCC-----CCHHHHHHHHHhhCCEEEecCccccCCCEEEEeCCccCChHHHHHHHHHHHHHHh
Confidence 77532 2566777777655599999999877789999994 3 56778999999999876
No 86
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=100.00 E-value=5.5e-35 Score=277.06 Aligned_cols=322 Identities=14% Similarity=0.093 Sum_probs=249.1
Q ss_pred CCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecC
Q 014603 62 RTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPR 141 (422)
Q Consensus 62 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~ 141 (422)
+.++.+.+++.+.+.. .|++. ..++++.+++++.+.+|.. +++++++|+|+++|+..++.+++++||+|++++
T Consensus 30 ~~~~~v~~a~~~~~~~----~~~~~--~~~~~~~~~~~la~~~g~~-~~~~v~~~~g~t~a~~~~~~~l~~~gd~vl~~~ 102 (386)
T 2dr1_A 30 ACFPEVLEIMKVQMFS----HRSKE--YRKVHMDTVERLREFLEVE-KGEVLLVPSSGTGIMEASIRNGVSKGGKVLVTI 102 (386)
T ss_dssp CCCHHHHHHTTSCCCC----TTSHH--HHHHHHHHHHHHHHHHTCS-SSEEEEESSCHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred CCcHHHHHHHhccccc----ccCHH--HHHHHHHHHHHHHHHhCCC-CCcEEEEeCChHHHHHHHHHHhhcCCCeEEEEc
Confidence 5678888888776532 45432 2566777777766655543 367899999999999999999999999999999
Q ss_pred CCccc--hHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhh--cCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCc
Q 014603 142 PGFPY--YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALA--DENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGI 217 (422)
Q Consensus 142 ~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~--~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~ 217 (422)
|+|++ +...++..|.+++.++.++ ++.+|++.|++.+ .++++++++++|+||||.+.+ +++|.++|+++|+
T Consensus 103 ~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~ 177 (386)
T 2dr1_A 103 IGAFGKRYKEVVESNGRKAVVLEYEP--GKAVKPEDLDDALRKNPDVEAVTITYNETSTGVLNP---LPELAKVAKEHDK 177 (386)
T ss_dssp SSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECC---HHHHHHHHHHTTC
T ss_pred CCchhHHHHHHHHHhCCceEEEecCC--CCCCCHHHHHHHHhcCCCCcEEEEEeecCCcchhCC---HHHHHHHHHHcCC
Confidence 99998 8888888999999998754 4568999999988 467899999999999999965 7888999999999
Q ss_pred EEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHH-----------
Q 014603 218 MVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIK----------- 286 (422)
Q Consensus 218 ~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~----------- 286 (422)
++|+|++|+.+.+ ..++... +..+++.|+||++++++ ++||++++ +++++.+.
T Consensus 178 ~li~D~a~~~~~~----~~~~~~~---~~di~~~s~sK~~~~~~-g~G~~~~~--------~~~~~~~~~~~~~~~~~~~ 241 (386)
T 2dr1_A 178 LVFVDAVSAMGGA----DIKFDKW---GLDVVFSSSQKAFGVPP-GLAIGAFS--------ERFLEIAEKMPERGWYFDI 241 (386)
T ss_dssp EEEEECTTTBTTB----CCCTTTT---TCSEEEEETTSTTCCCS-SCEEEEEC--------HHHHHHHTTCTTCCSTTCH
T ss_pred eEEEEccccccCc----ccccccc---CCcEEEEeccccccCCC-ceEEEEEC--------HHHHHHHhcCCCCceEEeH
Confidence 9999999986433 1222222 33599999999987662 38999986 35666552
Q ss_pred -----hh---hhhccCcchHHHHHHHHHHhhchHH-HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC---CceEEEEe
Q 014603 287 -----SF---LNISSDPATFIQGAVPQILEKTEEE-FFSKITDILRETADICCDRLKEIPCITCPKKPE---GSMFVMVK 354 (422)
Q Consensus 287 -----~~---~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~---~g~~~~~~ 354 (422)
.. ....++++.+.+.++.++|+...+. ++++.+++++++++.+.+.|+++ ++.+. .+. .+.++|+.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~ 319 (386)
T 2dr1_A 242 PLYVKYLKEKESTPSTPPMPQVFGINVALRIIEKMGGKEKWLEMYEKRAKMVREGVREI-GLDIL-AEPGHESPTITAVL 319 (386)
T ss_dssp HHHHHHHHHHSSCSSCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCCBS-SCTTCBCSSEEEEE
T ss_pred HHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHc-CCeeC-cCccccCCceEEEE
Confidence 11 1223467888898888888764333 47788999999999999999988 77733 443 36788888
Q ss_pred cCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHHHHHHHHHhc
Q 014603 355 LNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGRMKAFYDRHA 419 (422)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~l~~~~~~~~ 419 (422)
++.. .+..++...+.++ ||.+.+|..+...+++||+++ ++++++++++++|+++++++.
T Consensus 320 ~~~~-----~~~~~~~~~l~~~-gi~v~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 380 (386)
T 2dr1_A 320 TPPG-----IKGDEVYEAMRKR-GFELAKGYGSVKEKTFRIGHMGYMKFEDIQEMLDNLREVINELK 380 (386)
T ss_dssp CCTT-----CCHHHHHHHHHHT-TEECEECCGGGTTTEEEEECCSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred cCCC-----CCHHHHHHHHHHC-CeEEecCccccCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 8632 2566777777555 999999987656789999998 689999999999999988763
No 87
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=100.00 E-value=7.8e-35 Score=275.76 Aligned_cols=331 Identities=15% Similarity=0.106 Sum_probs=245.2
Q ss_pred eeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCC-------CCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHH
Q 014603 48 IPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFN-------CYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT 120 (422)
Q Consensus 48 i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~-------~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~ 120 (422)
+.|+.+... ++++.+.+++.+++.+...+ .|....+..++++++++++ ++++++|++|+|++
T Consensus 3 ~yld~~~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~v~~~~g~t 71 (384)
T 1eg5_A 3 VYFDNNATT-----RVDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVL------GVSPSEIFFTSCAT 71 (384)
T ss_dssp EECBTTTCC-----CCCHHHHHHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHH------TSCGGGEEEESCHH
T ss_pred EEEecCccC-----CCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHc------CCCCCeEEEECCHH
Confidence 566666633 67799999999988752111 1222345688999999999 45678999999999
Q ss_pred HHHHHHHHHhc----CCCCEEEecCCCccchHHHH---hhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCC
Q 014603 121 QAIEVILTVLA----RPGANILLPRPGFPYYEARA---THSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPG 193 (422)
Q Consensus 121 ~a~~~~~~~l~----~~gd~Vl~~~~~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~ 193 (422)
+++..+++++. ++||+|+++.|+|+++...+ +..|.+++.++.++ ++.+|++.|++.++++++++++++|+
T Consensus 72 ~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~~~ 149 (384)
T 1eg5_A 72 ESINWILKTVAETFEKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDS--RGVVKLEELEKLVDEDTFLVSIMAAN 149 (384)
T ss_dssp HHHHHHHHHHHHHTTTTCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBCT--TSCBCHHHHHHHCCTTEEEEEEESBC
T ss_pred HHHHHHHHhhhhhccCCCCEEEECCCCchHHHHHHHHHHhcCCEEEEEccCC--CCccCHHHHHHHhCCCCeEEEEECCC
Confidence 99999999987 79999999999998876555 66799999888753 46689999999998889999999999
Q ss_pred CCcccccCHHHHHHHHHHHHHcC--cEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeC
Q 014603 194 NPCGNVYTYQHLQKIAETAKKLG--IMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD 271 (422)
Q Consensus 194 nptG~~~~~~~l~~i~~~~~~~~--~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~ 271 (422)
||||.+++ +++|.++|+++| +++|+|++|+. +....++..+ +..+++.|+||+++++| +||+++++
T Consensus 150 nptG~~~~---~~~i~~l~~~~~~~~~li~Dea~~~----~~~~~~~~~~---~~di~~~s~sK~~g~~G--~G~~~~~~ 217 (384)
T 1eg5_A 150 NEVGTIQP---VEDVTRIVKKKNKETLVHVDAVQTI----GKIPFSLEKL---EVDYASFSAHKFHGPKG--VGITYIRK 217 (384)
T ss_dssp TTTCBBCC---HHHHHHHHHHHCTTCEEEEECTTTT----TTSCCCCTTT---CCSEEEEEGGGGTSCTT--CEEEEECT
T ss_pred CCcccccC---HHHHHHHHHhcCCceEEEEEhhhhc----CCcccCchhc---CCCEEEecHHHhcCCCc--eEEEEEcC
Confidence 99999987 678888899999 99999999973 2112223322 23588999999988778 79999874
Q ss_pred CCCcccchhHHHHHHh----hhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC-
Q 014603 272 PNGILQDSGIVDSIKS----FLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPE- 346 (422)
Q Consensus 272 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~- 346 (422)
... +...+.. .....++++.+.+.++.++|+.. ..++++.+++++++++.+.+.|++ +++.+. .+.
T Consensus 218 ~~~------~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~-~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~-~~~~ 288 (384)
T 1eg5_A 218 GVP------IRPLIHGGGQERGLRSGTQNVPGIVGAARAMEIA-VEELSEAAKHMEKLRSKLVSGLMN-LGAHII-TPLE 288 (384)
T ss_dssp TSC------CCCSBCSSCTTTTTBCSCCCHHHHHHHHHHHHHH-HHTHHHHHHHHHHHHHHHHHHHHT-TTCEEC-SCTT
T ss_pred CCc------cccccccCcccccccCCCCChHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHhCC-CCeEEe-CCcc
Confidence 210 0111111 01133467888888888888753 346788889999999999999998 577633 332
Q ss_pred C--ceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC-------------------CCeEEEEec--cChHH
Q 014603 347 G--SMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL-------------------KDWLRITFA--VEPSA 403 (422)
Q Consensus 347 ~--g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~-------------------~~~iRis~~--~~~~~ 403 (422)
+ +.++++.++.. +..++...+ .++||.+.+|..|+. .+++||+++ +++++
T Consensus 289 ~~~~~~~~~~~~~~------~~~~~~~~l-~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~ 361 (384)
T 1eg5_A 289 ISLPNTLSVSFPNI------RGSTLQNLL-SGYGIYVSTSSACTSKDERLRHVLDAMGVDRRIAQGAIRISLCKYNTEEE 361 (384)
T ss_dssp SBCTTEEEEECTTC------CHHHHHHHH-HHTTEECBC------------CHHHHTTCCHHHHHHEEEEECCTTCCHHH
T ss_pred cCCCCEEEEEeCCC------CHHHHHHHH-hhCCeEEeccccccCCCCcchHHHHHcCCChhhcCCeEEEECCCCCCHHH
Confidence 1 34566666521 466676665 677999999876642 368999998 78999
Q ss_pred HHHHHHHHHHHHHHhc
Q 014603 404 LEDGLGRMKAFYDRHA 419 (422)
Q Consensus 404 l~~~~~~l~~~~~~~~ 419 (422)
+++++++|++++++++
T Consensus 362 i~~~~~~l~~~~~~~~ 377 (384)
T 1eg5_A 362 VDYFLKKIEEILSFLD 377 (384)
T ss_dssp HHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999998764
No 88
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=100.00 E-value=1.4e-34 Score=275.51 Aligned_cols=335 Identities=13% Similarity=0.113 Sum_probs=248.6
Q ss_pred CCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCC----C--CCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEec
Q 014603 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARF----N--CYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTL 117 (422)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~----~--~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~ 117 (422)
+..+|||+.+.+- +++.+|.+.+++.+.+..... . .|+......++|+.++++++ .+ +.++++
T Consensus 42 g~~~id~~~~~~~---g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~------~~--~~i~~~ 110 (399)
T 3tqx_A 42 EKEVLNFCANNYL---GLADHPALIKTAQTVVEQYGFGMASVRFICGTQTIHKELEKDISEFLG------TD--DTILYS 110 (399)
T ss_dssp TEEEEECSSCCTT---SCTTCHHHHHHHHHHHHHHCSCCCSCCCCCCCBHHHHHHHHHHHHHHT------CS--EEEEES
T ss_pred CeeEEEeeccCcc---cccCCHHHHHHHHHHHHHhCCCCCCcCccccCchHHHHHHHHHHHHHC------CC--cEEEEC
Confidence 4568999999632 345678999999888765211 1 12233346899999999983 22 355555
Q ss_pred CHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC------CceEEEEeC
Q 014603 118 GCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE------NTVALVIIN 191 (422)
Q Consensus 118 g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~i~i~~ 191 (422)
+|++++..++.+++++||.|+++.|+|..+...++..|.+++.++. .|++.|++.+++ +++++++++
T Consensus 111 sGt~a~~~~l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~~~v~~~~ 183 (399)
T 3tqx_A 111 SCFDANGGLFETLLGPEDAIISDELNHASIIDGIRLCKAQRYRYKN-------NAMGDLEAKLKEADEKGARFKLIATDG 183 (399)
T ss_dssp CHHHHHHTTHHHHCCTTCEEEEETTCCHHHHHHHHSCCSEEEEECT-------TCTTHHHHHHHHHHTTTCSSEEEEEES
T ss_pred chHHHHHHHHHHhcCCCCEEEECCcccHHHHHHHHHcCCceeEeCC-------CCHHHHHHHHHhhhccCCCceEEEEeC
Confidence 6688999999999999999999999999999999999999888874 366788777654 789999999
Q ss_pred CCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCC-CCCeEEEecCccccCCCCceeEEEEee
Q 014603 192 PGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IVPVLTLGSISKRWIVPGWRLGWLVTS 270 (422)
Q Consensus 192 p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~-~~~~i~i~s~sK~~~~~G~r~G~~~~~ 270 (422)
|+||||.+++ +++|.++|+++|+++|+||+|+...+.......+...+. .+..++++|+||+++ |++.||++++
T Consensus 184 ~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~--g~~gG~~~~~ 258 (399)
T 3tqx_A 184 VFSMDGIIAD---LKSICDLADKYNALVMVDDSHAVGFIGENGRGTPEYCGVADRVDILTGTLGKALG--GASGGYTSGH 258 (399)
T ss_dssp EETTTTEECC---HHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHHTCTTCCSEEEEESSSSSC--SSCCEEEEEC
T ss_pred CCCCCCCcCC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCCcEEEecchHhcc--cCceEEEEcC
Confidence 9999999987 889999999999999999999632222221111222221 233599999999986 4455999986
Q ss_pred CCCCcccchhHHHHHHhhhh---hccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCC
Q 014603 271 DPNGILQDSGIVDSIKSFLN---ISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEG 347 (422)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~ 347 (422)
+++++.+..... .++++++..+.++.++++... .+.++.+++++++++.+.+.|+++ ++.+. +..
T Consensus 259 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~--~~~ 326 (399)
T 3tqx_A 259 --------KEIIEWLRNRSRPYLFSNTVAPVIVATSLKVLELLK-TEGPQLRKQLQENSRYFRAGMEKL-GFQLV--PGN 326 (399)
T ss_dssp --------HHHHHHHHHHCHHHHSSCCCCHHHHHHHHHHHHHHH-HTHHHHHHHHHHHHHHHHHHHHHH-TCCBC--CCS
T ss_pred --------HHHHHHHHHhCcceeccCCCcHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHc-CCCcC--CCC
Confidence 467777766432 234667777778877877532 567888999999999999999988 77633 445
Q ss_pred ceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC---CCeEEEEec--cChHHHHHHHHHHHHHHHHhc
Q 014603 348 SMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL---KDWLRITFA--VEPSALEDGLGRMKAFYDRHA 419 (422)
Q Consensus 348 g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~---~~~iRis~~--~~~~~l~~~~~~l~~~~~~~~ 419 (422)
+.++|+.++... +..++...+.+ +||.+.|+..+.. .+++|++++ ++++++++++++|+++++++.
T Consensus 327 ~~~~~~~~~~~~-----~~~~~~~~l~~-~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 397 (399)
T 3tqx_A 327 HPIIPVMLGDAQ-----LATNMADHLLQ-EGIYVVGFSYPVVPMGKARIRVQMSAVHTQQQLDRAIEAFGQVGKKLG 397 (399)
T ss_dssp SSEEEEEEECHH-----HHHHHHHHHHH-TTEECCEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHTT
T ss_pred CCEEEEEeCCHH-----HHHHHHHHHHH-CCCEEeeeCCCCCCCCCceEEEEeecCCCHHHHHHHHHHHHHHHHHhc
Confidence 668888876421 34566666654 6999998765432 469999997 789999999999999998753
No 89
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=100.00 E-value=1.7e-34 Score=274.43 Aligned_cols=332 Identities=14% Similarity=0.067 Sum_probs=250.2
Q ss_pred CCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCC--CCCCHHHHHHHHHHHhhcCCCCCCCC-CEEEecCHH
Q 014603 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSS--TVGILPARRAIADYLNRDLPYKLSPD-DVYLTLGCT 120 (422)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~--~~g~~~lr~~ia~~l~~~~~~~~~~~-~i~~~~g~~ 120 (422)
....++++.|. +++++.+.+++.+.+.. .|.+ .....++|+++++++ +++++ +|++|+|++
T Consensus 17 ~~~~~~~~~g~------~~~~~~v~~a~~~~~~~----~~~~~~~~~~~~l~~~la~~~------g~~~~~~i~~~~g~t 80 (393)
T 2huf_A 17 TPNKLLMGPGP------SNAPQRVLDAMSRPILG----HLHPETLKIMDDIKEGVRYLF------QTNNIATFCLSASGH 80 (393)
T ss_dssp CCCCEECSSSC------CCCCHHHHHHTTSCCCC----TTSHHHHHHHHHHHHHHHHHH------TCCCSEEEEESSCHH
T ss_pred CCCeEEecCCC------CCCCHHHHHHHHhhhcc----CCCHHHHHHHHHHHHHHHHHh------CCCCCcEEEEcCcHH
Confidence 44556776664 46778999988876643 2322 245788999999998 44554 899999999
Q ss_pred HHHHHHHHHhcCCCCEEEecCCCccch--HHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC-CceEEEEeCCCCCcc
Q 014603 121 QAIEVILTVLARPGANILLPRPGFPYY--EARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE-NTVALVIINPGNPCG 197 (422)
Q Consensus 121 ~a~~~~~~~l~~~gd~Vl~~~~~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~i~~p~nptG 197 (422)
+|+..++.+++++||+|+++.|+|+++ ...++..|.+++.+++++ ++.+|++.|++.+++ +++++++++|+||||
T Consensus 81 ~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG 158 (393)
T 2huf_A 81 GGMEATLCNLLEDGDVILIGHTGHWGDRSADMATRYGADVRVVKSKV--GQSLSLDEIRDALLIHKPSVLFLTQGDSSTG 158 (393)
T ss_dssp HHHHHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHHCCSEEEEESEETTTT
T ss_pred HHHHHHHHHHhCCCCEEEEECCCcchHHHHHHHHHcCCeeEEEeCCC--CCCCCHHHHHHHHhccCCcEEEEEccCCCcc
Confidence 999999999999999999999999874 334556799999998754 346899999999877 889999999999999
Q ss_pred cccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCcccc-CCCCceeEEEEeeCCCCcc
Q 014603 198 NVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRW-IVPGWRLGWLVTSDPNGIL 276 (422)
Q Consensus 198 ~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~-~~~G~r~G~~~~~~~~~~~ 276 (422)
.+++ +++|.++|+++|+++|+|++++. +.....+... +..+++.|+||++ +++|+ ||++++
T Consensus 159 ~~~~---l~~i~~~~~~~~~~li~D~a~~~----~~~~~~~~~~---~~d~~~~s~sK~l~g~~G~--G~~~~~------ 220 (393)
T 2huf_A 159 VLQG---LEGVGALCHQHNCLLIVDTVASL----GGAPMFMDRW---EIDAMYTGSQKVLGAPPGI--TPVSFS------ 220 (393)
T ss_dssp EECC---CTTHHHHHHHTTCEEEEECTTTB----TTBCCCTTTT---TCSEEECCSSSTTCCCSSC--EEEEEC------
T ss_pred ccCC---HHHHHHHHHHcCCEEEEEccccc----CCCCcchhhc---CccEEEECCCcccccCCCe--EEEEEC------
Confidence 9987 78889999999999999999864 2212222222 2348889999974 56775 999986
Q ss_pred cchhHHHHHHhhh----h--------------------hccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHH
Q 014603 277 QDSGIVDSIKSFL----N--------------------ISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDR 332 (422)
Q Consensus 277 ~~~~~~~~~~~~~----~--------------------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 332 (422)
+++++++.... . ..++++...+.++.++++...+..+++..++++++++.+.+.
T Consensus 221 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~ 298 (393)
T 2huf_A 221 --HRAVERYKRRNTKVKVYYWDMSLVGDYWGCFGRPRIYHHTISSTLLYGLREAIAMACEEGLPALIARHEDCAKRLYRG 298 (393)
T ss_dssp --HHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCSCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHhhcCCCCceEEEchHHHHhhhccccccCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Confidence 46777765430 0 113556666777766776533345788889999999999999
Q ss_pred hhcCCCCCCCCCCC---CceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEe-c--cChHHHHH
Q 014603 333 LKEIPCITCPKKPE---GSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITF-A--VEPSALED 406 (422)
Q Consensus 333 L~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~-~--~~~~~l~~ 406 (422)
|+++ ++.+. .|. .+.++++.++.. .+..++...+++++||.+.+|..+...+++||++ + ++++++++
T Consensus 299 L~~~-g~~~~-~~~~~~~~~~~~~~~~~~-----~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~Ri~~~~~~~~~e~i~~ 371 (393)
T 2huf_A 299 LQDA-GFELY-ADPKDRLSTVTTIKVPQG-----VDWLKAAQYAMKTYLVEISGGLGPTAGQVFRIGLMGQNATTERVDR 371 (393)
T ss_dssp HHHT-TCCBS-SCGGGBCTTEEEEECCTT-----CCHHHHHHHHHHHHCEECBCCCGGGTTTEEEEECCGGGCSHHHHHH
T ss_pred HHHc-CCeec-cCccccCCcEEEEEcCCC-----CCHHHHHHHHHHhCCEEEecCcccccCCEEEEEcccCcCCHHHHHH
Confidence 9988 77633 442 345777777521 1566777777666799999998776678999999 5 46889999
Q ss_pred HHHHHHHHHHHhcc
Q 014603 407 GLGRMKAFYDRHAK 420 (422)
Q Consensus 407 ~~~~l~~~~~~~~~ 420 (422)
++++|+++++++..
T Consensus 372 ~~~~l~~~~~~~~~ 385 (393)
T 2huf_A 372 VLQVFQEAVAAVKP 385 (393)
T ss_dssp HHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHcCC
Confidence 99999999987654
No 90
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=100.00 E-value=3.5e-35 Score=278.80 Aligned_cols=330 Identities=14% Similarity=0.107 Sum_probs=246.5
Q ss_pred CCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCC---CC---CCCC-CCCCHHHHHHHHHHHhhcCCCCCCCCCEEEec
Q 014603 45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSAR---FN---CYSS-TVGILPARRAIADYLNRDLPYKLSPDDVYLTL 117 (422)
Q Consensus 45 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~---~~---~y~~-~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~ 117 (422)
++.++|+.+.+. +.++.+.+++.+.+.... .. .|+. ..+..++|+++++++ ++++++|++|+
T Consensus 15 ~~~i~l~~~~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~~la~~~------g~~~~~v~~~~ 83 (390)
T 1elu_A 15 ANKTYFNFGGQG-----ILPTVALEAITAMYGYLQENGPFSIAANQHIQQLIAQLRQALAETF------NVDPNTITITD 83 (390)
T ss_dssp TTSEECCTTTCC-----CCCHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHT------TSCGGGEEEES
T ss_pred CCeEEecCCccC-----CCCHHHHHHHHHHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHc------CCCHHHEEEeC
Confidence 457999988733 566889999988876421 01 3433 256789999999998 45778999999
Q ss_pred CHHHHHHHHHHHh-cCCCCEEEecCCCccchHHH----HhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCC
Q 014603 118 GCTQAIEVILTVL-ARPGANILLPRPGFPYYEAR----ATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINP 192 (422)
Q Consensus 118 g~~~a~~~~~~~l-~~~gd~Vl~~~~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p 192 (422)
|++++++.+++++ +++||+|+++.|+|+++... ++..|.+++.++.++.+++.+|++.|++.++++++++++++|
T Consensus 84 g~t~a~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~ 163 (390)
T 1elu_A 84 NVTTGCDIVLWGLDWHQGDEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLGPKTRLVILSHL 163 (390)
T ss_dssp SHHHHHHHHHHHSCCCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCCTTEEEEEEESB
T ss_pred ChHHHHHHHHhCCCCCCCCEEEEecCcccHHHHHHHHHHHHhCcEEEEEcCCCCCCccchHHHHHHhcCCCceEEEEecc
Confidence 9999999999999 89999999999999987543 466799999988764345678999999999888999999999
Q ss_pred CCCcccccCHHHHHHHHHHHH----HcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEE
Q 014603 193 GNPCGNVYTYQHLQKIAETAK----KLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLV 268 (422)
Q Consensus 193 ~nptG~~~~~~~l~~i~~~~~----~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~ 268 (422)
+||||.+++ +++|.++|+ ++|+++|+|++|+.. .....+... ...+++.|+||+ ..+|.++||++
T Consensus 164 ~nptG~~~~---~~~i~~l~~~~~~~~~~~li~Dea~~~g----~~~~~~~~~---~~d~~~~s~~K~-~~~~~g~G~~~ 232 (390)
T 1elu_A 164 LWNTGQVLP---LAEIMAVCRRHQGNYPVRVLVDGAQSAG----SLPLDFSRL---EVDYYAFTGHKW-FAGPAGVGGLY 232 (390)
T ss_dssp CTTTCCBCC---HHHHHHHHHHCCSSSCCEEEEECTTTBT----TBCCCTTTS---CCSEEEEESSST-TCCCTTCEEEE
T ss_pred ccCCceecC---HHHHHHHHhhhhhhcCcEEEEEcccccC----CcCCChhhc---CCCEEEcccccc-ccCCCceEEEE
Confidence 999999987 788899999 999999999999852 212222222 234889999995 34556699999
Q ss_pred eeCCCCcccchhHHHHHHhh-----------------------hhhccCcchHHHHHHHHHHhhchH-HHHHHHHHHHHH
Q 014603 269 TSDPNGILQDSGIVDSIKSF-----------------------LNISSDPATFIQGAVPQILEKTEE-EFFSKITDILRE 324 (422)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~ 324 (422)
+++ ++++.+... ....++++...+.++.++++...+ .++++..+++++
T Consensus 233 ~~~--------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~l~~~~~~~~~~~~~~~ 304 (390)
T 1elu_A 233 IHG--------DCLGEINPTYVGWRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQ 304 (390)
T ss_dssp ECT--------TTGGGCCCCSCCTTTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred ECH--------HhHhhcCCccccCCcccccccCcccccccchHhhCCCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 863 333433321 112345666777777777764332 347888999999
Q ss_pred HHHHHHHHhhcCCCCCCCCC-CCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cCh
Q 014603 325 TADICCDRLKEIPCITCPKK-PEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEP 401 (422)
Q Consensus 325 ~~~~l~~~L~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~ 401 (422)
+++.+.+.|++++++.+... +..+.++++.++.. .+..++...+ .++||.+.+|. .++++||+++ .++
T Consensus 305 ~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l-~~~gi~v~~~~---~~~~iRis~~~~~~~ 375 (390)
T 1elu_A 305 RSEFLWRGLNQLPHVHCLATSAPQAGLVSFTVDSP-----LGHRAIVQKL-EEQRIYLRTIA---DPDCIRACCHYITDE 375 (390)
T ss_dssp HHHHHHHHHHHSTTEEESCSSCCSSSEEEEEECSS-----SCHHHHHHHH-HHTTEECEEET---TTTEEEEECCTTCCH
T ss_pred HHHHHHHHHHhcCCcEEecCccccccEEEEEcCCC-----CCHHHHHHHH-HHCCEEEEecC---CCCeEEEecccCCCH
Confidence 99999999999878773321 23344555577521 1466777776 56799999986 3579999986 789
Q ss_pred HHHHHHHHHHHH
Q 014603 402 SALEDGLGRMKA 413 (422)
Q Consensus 402 ~~l~~~~~~l~~ 413 (422)
+++++++++|++
T Consensus 376 ~~i~~~~~~l~~ 387 (390)
T 1elu_A 376 EEINHLLARLAD 387 (390)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHHh
Confidence 999999998865
No 91
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=100.00 E-value=3.4e-34 Score=272.30 Aligned_cols=332 Identities=12% Similarity=0.037 Sum_probs=246.7
Q ss_pred CceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHH
Q 014603 46 PLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEV 125 (422)
Q Consensus 46 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~ 125 (422)
+.+.|+.+.+. ++++.+.+++.+.+.. ...+....+..++|+++++++ +++++++++|+|+++++..
T Consensus 8 ~~~yl~~~~~~-----~~~~~v~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~------g~~~~~v~~t~g~t~a~~~ 74 (392)
T 2z9v_A 8 DPVITLTAGPV-----NAYPEVLRGLGRTVLY--DYDPAFQLLYEKVVDKAQKAM------RLSNKPVILHGEPVLGLEA 74 (392)
T ss_dssp CCSEECSSSCC-----CCCHHHHHHTTSCCCC--TTSHHHHHHHHHHHHHHHHHT------TCSSCCEEESSCTHHHHHH
T ss_pred CcceeecCCCc-----CCCHHHHHHHhccccc--cccHHHHHHHHHHHHHHHHHh------CCCCCEEEEeCCchHHHHH
Confidence 44667666533 6678999988877653 111222335678899999988 4567899999999999999
Q ss_pred HHHHhcCCCCEEEecCCCccch--HHHHhhCCCeEEEeeccCCCCcccCHHHHHHhh--cCCceEEEEeCCCCCcccccC
Q 014603 126 ILTVLARPGANILLPRPGFPYY--EARATHSHLEVRHFDLLPAKGWEVDLDAVEALA--DENTVALVIINPGNPCGNVYT 201 (422)
Q Consensus 126 ~~~~l~~~gd~Vl~~~~~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~--~~~~~~i~i~~p~nptG~~~~ 201 (422)
++++++++||+|++++|+|+++ ...++..|.+++.++.++ ++.+|++.|++.+ .++++++++++|+||||.+++
T Consensus 75 ~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~ 152 (392)
T 2z9v_A 75 AAASLISPDDVVLNLASGVYGKGFGYWAKRYSPHLLEIEVPY--NEAIDPQAVADMLKAHPEITVVSVCHHDTPSGTINP 152 (392)
T ss_dssp HHHHHCCTTCCEEEEESSHHHHHHHHHHHHHCSCEEEEECCT--TSCCCHHHHHHHHHHCTTCCEEEEESEEGGGTEECC
T ss_pred HHHHhcCCCCEEEEecCCcccHHHHHHHHHcCCceEEeeCCC--CCCCCHHHHHHHHhcCCCCcEEEEeccCCCCceecc
Confidence 9999999999999999999875 344455788999998754 3458999999988 457899999999999999986
Q ss_pred HHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCcccc-CCCCceeEEEEeeCCCCcccchh
Q 014603 202 YQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRW-IVPGWRLGWLVTSDPNGILQDSG 280 (422)
Q Consensus 202 ~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~-~~~G~r~G~~~~~~~~~~~~~~~ 280 (422)
+++|.++|+++|+++|+|++|+. +....++..++ ..+++.|+||++ +++| +||++++ ++
T Consensus 153 ---l~~i~~l~~~~~~~li~D~a~~~----g~~~~~~~~~~---~d~~~~s~sK~~~~~~g--~G~l~~~--------~~ 212 (392)
T 2z9v_A 153 ---IDAIGALVSAHGAYLIVDAVSSF----GGMKTHPEDCK---ADIYVTGPNKCLGAPPG--LTMMGVS--------ER 212 (392)
T ss_dssp ---HHHHHHHHHHTTCEEEEECTTTB----TTBSCCGGGGT---CSEEEECSSSTTCCCSC--CEEEEEC--------HH
T ss_pred ---HHHHHHHHHHcCCeEEEEccccc----CCccccccccc---ceEEEecCcccccCCCc--eeEEEEC--------HH
Confidence 67889999999999999999974 22222233333 248899999964 3456 5999986 45
Q ss_pred HHHHHHhhh---------------------hhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 014603 281 IVDSIKSFL---------------------NISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCI 339 (422)
Q Consensus 281 ~~~~~~~~~---------------------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 339 (422)
++++++... ...++++...+.++.++++...+..+++.+++++++++.+.+.|+++ ++
T Consensus 213 ~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~ 291 (392)
T 2z9v_A 213 AWAKMKANPLAPRASMLSIVDWENAWSRDKPFPFTPSVSEINGLDVALDLYLNEGPEAVWARHALTAKAMRAGVTAM-GL 291 (392)
T ss_dssp HHHHHHTCTTSCCSSTTCSGGGTTTTSTTSCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TC
T ss_pred HHHHhhhccCCCCceeccHHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHc-CC
Confidence 666664310 11235566666667677765333337788899999999999999987 77
Q ss_pred CCCCCCC----CceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEe-c--cChHHHHHHHHHHH
Q 014603 340 TCPKKPE----GSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITF-A--VEPSALEDGLGRMK 412 (422)
Q Consensus 340 ~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~-~--~~~~~l~~~~~~l~ 412 (422)
.+. .|. .+.++++.++.. .+..++...+.+++||.+.+|..+...+++|+++ + ++++++++++++|+
T Consensus 292 ~~~-~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~L~~~~gi~v~~g~~~~~~~~lRi~~~~~~~~~~~i~~~~~~l~ 365 (392)
T 2z9v_A 292 SVW-AASDSIASPTTTAVRTPDG-----VDEKALRQAARARYGVVFSSGRGETLGKLTRIGHMGPTAQPIYAIAALTALG 365 (392)
T ss_dssp CBS-SSSGGGBCTTEEEEECCTT-----CCHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHH
T ss_pred eec-cCCccccCCceEEEECCCC-----CCHHHHHHHHHhcCCEEEecCCCCCCCCeEEEeCcccccCHHHHHHHHHHHH
Confidence 633 422 366778887532 1566777777555599999998766678999995 4 78999999999999
Q ss_pred HHHHHhc
Q 014603 413 AFYDRHA 419 (422)
Q Consensus 413 ~~~~~~~ 419 (422)
++++++.
T Consensus 366 ~~~~~~~ 372 (392)
T 2z9v_A 366 GAMNAAG 372 (392)
T ss_dssp HHHHHTT
T ss_pred HHHHHcC
Confidence 9998764
No 92
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=100.00 E-value=5.3e-34 Score=273.80 Aligned_cols=338 Identities=15% Similarity=0.107 Sum_probs=250.3
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhC-C-CCCCCCCC----CCCHHHHHHHHHHHhhcCCCCCCCCCEEEe
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRS-A-RFNCYSST----VGILPARRAIADYLNRDLPYKLSPDDVYLT 116 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~-~-~~~~y~~~----~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~ 116 (422)
+|..+|||+.|++ .+++.++.+.+++.+++.. + ....|... ....++++.++++++ . +..+++
T Consensus 62 ~g~~~id~~~~~~---lg~~~~~~v~~a~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~la~~~g------~--~~~i~~ 130 (427)
T 2w8t_A 62 RGKDTILLGTYNY---MGMTFDPDVIAAGKEALEKFGSGTCGSRMLNGTFHDHMEVEQALRDFYG------T--TGAIVF 130 (427)
T ss_dssp TTEEEEECSCCCT---TCGGGCHHHHHHHHHHHHHHCSCCCSCTTTTCCCHHHHHHHHHHHHHHT------C--SEEEEE
T ss_pred CCceEEEEECccc---ccCCCCHHHHHHHHHHHHHhCCCCcccccccCCcHHHHHHHHHHHHHhC------C--CceEEe
Confidence 4667899999973 2356789999999988865 2 11223222 334788888888882 2 356777
Q ss_pred cCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC----CceEEEEeCC
Q 014603 117 LGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE----NTVALVIINP 192 (422)
Q Consensus 117 ~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~----~~~~i~i~~p 192 (422)
++|++++..++.+++++||.|+++.|+|.++...++..|.+++.++. .|++.|++.+++ ++++++++++
T Consensus 131 ~sGs~a~~~al~~l~~~gd~vl~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~v~~~~~ 203 (427)
T 2w8t_A 131 STGYMANLGIISTLAGKGEYVILDADSHASIYDGCQQGNAEIVRFRH-------NSVEDLDKRLGRLPKEPAKLVVLEGV 203 (427)
T ss_dssp SCHHHHHHHHHHHHSCTTCEEEEETTCCHHHHHHHHHSCSEEEEECT-------TCHHHHHHHHHTSCSSSCEEEEEESE
T ss_pred cCcHHHHHHHHHHhcCCCCEEEECCcccHHHHHHHHHcCCeeEEeCC-------CCHHHHHHHHHhccCCCCeEEEEcCC
Confidence 77788999999999999999999999999999999999998887762 588999988865 6788999999
Q ss_pred CCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCC-CCeEEEecCccccCCCCceeEEEEeeC
Q 014603 193 GNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSI-VPVLTLGSISKRWIVPGWRLGWLVTSD 271 (422)
Q Consensus 193 ~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~-~~~i~i~s~sK~~~~~G~r~G~~~~~~ 271 (422)
+||+|.+++ +++|.++|+++|+++|+||+|+.+.++.........++.. +.++++.|+||.++++| ||+++++
T Consensus 204 ~n~tG~~~~---l~~l~~l~~~~g~~li~Dea~~~~~~~~~g~~~~~~~~~~~~~di~~~s~sK~~g~~g---G~v~~~~ 277 (427)
T 2w8t_A 204 YSMLGDIAP---LKEMVAVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLEGQIDFVVGTFSKSVGTVG---GFVVSNH 277 (427)
T ss_dssp ETTTTEECC---HHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSCC---EEEEECC
T ss_pred CCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchHhhcCCCcCCcEEEecchhhhccCC---CEEEeCH
Confidence 999999976 8889999999999999999999876642211111112211 33699999999998776 9999863
Q ss_pred CCCcccchhHHHHHHhhh---hhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCc
Q 014603 272 PNGILQDSGIVDSIKSFL---NISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGS 348 (422)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g 348 (422)
++++.+.... ..++++++..++++.++|+... .+++.+++++++++++.+.|+++ ++.+...+..+
T Consensus 278 --------~l~~~l~~~~~~~~~~~~~~~~~~aa~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~ 346 (427)
T 2w8t_A 278 --------PKFEAVRLACRPYIFTASLPPSVVATATTSIRKLM--TAHEKRERLWSNARALHGGLKAM-GFRLGTETCDS 346 (427)
T ss_dssp --------TTGGGGGGTCHHHHSSCCCCHHHHHHHHHHHHHHT--SCHHHHHHHHHHHHHHHHHHHHH-TCEESCSSCCS
T ss_pred --------HHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHc-CCcccCCCCCC
Confidence 3555554431 2234567777777777776522 24677888999999999999987 66632133156
Q ss_pred eEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC---CCeEEEEec--cChHHHHHHHHHHHHHHHHhccc
Q 014603 349 MFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL---KDWLRITFA--VEPSALEDGLGRMKAFYDRHAKK 421 (422)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~---~~~iRis~~--~~~~~l~~~~~~l~~~~~~~~~~ 421 (422)
.++|+.++.. .+..++...+.+ +||.+.++..|+. .+++|++++ ++++++++++++|+++++++.++
T Consensus 347 ~~~~~~~~~~-----~~~~~l~~~L~~-~Gi~v~~~~~~~~~~~~~~lRi~~~~~~t~e~i~~~~~~l~~~l~~~~~~ 418 (427)
T 2w8t_A 347 AIVAVMLEDQ-----EQAAMMWQALLD-GGLYVNMARPPATPAGTFLLRCSICAEHTPAQIQTVLGMFQAAGRAVGVI 418 (427)
T ss_dssp SEEEEEESSH-----HHHHHHHHHHHH-TTEECEEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHHTCC
T ss_pred CEEEEEECCH-----HHHHHHHHHHHH-CCeEEeeeCCCCCCCCCeEEEEEeCCCCCHHHHHHHHHHHHHHHHHhCcc
Confidence 7888888632 124566666654 5999999887764 368999998 58999999999999999887543
No 93
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=100.00 E-value=2.7e-34 Score=275.79 Aligned_cols=337 Identities=15% Similarity=0.138 Sum_probs=245.6
Q ss_pred hccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCC----------CCCCHHHHHHHHHHHhhcCCCCCC
Q 014603 40 NKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSS----------TVGILPARRAIADYLNRDLPYKLS 109 (422)
Q Consensus 40 ~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~----------~~g~~~lr~~ia~~l~~~~~~~~~ 109 (422)
+..++.+.|.|+.+.+. ++++.+.+++.+++.......++. .....++++.+++++ +++
T Consensus 16 ~~~~~~~~iyld~~~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------~~~ 84 (423)
T 3lvm_A 16 VYRAMKLPIYLDYSATT-----PVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLV------GAD 84 (423)
T ss_dssp ----CCSSEECBTTTCC-----CCCHHHHHHHTTSSSTTSCCSCTTCTTSHHHHHHHHHHHHHHHHHHHHH------TCC
T ss_pred cccccCCCEeecCCCcC-----CCCHHHHHHHHHHHhhcccccCCCccccchhHHHHHHHHHHHHHHHHHc------CCC
Confidence 34468889999988744 678999999998876111111111 123467888888888 457
Q ss_pred CCCEEEecCHHHHHHHHHHHhcC----CCCEEEecCCCccchHHHH---hhCCCeEEEeeccCCCCcccCHHHHHHhhcC
Q 014603 110 PDDVYLTLGCTQAIEVILTVLAR----PGANILLPRPGFPYYEARA---THSHLEVRHFDLLPAKGWEVDLDAVEALADE 182 (422)
Q Consensus 110 ~~~i~~~~g~~~a~~~~~~~l~~----~gd~Vl~~~~~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~ 182 (422)
+++|++|+|+++|++.++.++.+ +||+|+++.++|+++...+ ...|.+++.++.++ ++.+|++.|++.+++
T Consensus 85 ~~~v~~~~ggt~a~~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~ 162 (423)
T 3lvm_A 85 PREIVFTSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQR--NGIIDLKELEAAMRD 162 (423)
T ss_dssp GGGEEEESSHHHHHHHHHHHHHHHHTTTCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCCT--TSCCCHHHHHHHCCT
T ss_pred CCeEEEeCChHHHHHHHHHHHHHhhccCCCEEEECCccchHHHHHHHHHHHcCCEEEEeccCC--CCccCHHHHHHhcCC
Confidence 78999999999999999998873 7999999999999887666 44599999988764 456899999999998
Q ss_pred CceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCc
Q 014603 183 NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGW 262 (422)
Q Consensus 183 ~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~ 262 (422)
+++++++++|+||||.+++ +++|.++|+++|++||+|++|+.. .....+...+ ..+++.|+||.++++|
T Consensus 163 ~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~~----~~~~~~~~~~---~di~~~s~sK~~g~~g- 231 (423)
T 3lvm_A 163 DTILVSIMHVNNEIGVVQD---IAAIGEMCRARGIIYHVDATQSVG----KLPIDLSQLK---VDLMSFSGHKIYGPKG- 231 (423)
T ss_dssp TEEEEECCSBCTTTCBBCC---HHHHHHHHHHHTCEEEEECTTTTT----TSCCCTTTSC---CSEEEEESTTTTSCSS-
T ss_pred CcEEEEEeCCCCCCccccC---HHHHHHHHHHcCCEEEEEhhhhcC----CCCcChhhcC---CCEEEechHHhcCCCC-
Confidence 9999999999999999987 777889999999999999998752 2112222333 3488999999877666
Q ss_pred eeEEEEeeCCCCcccchhHHHHHHhhh--------hhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhh
Q 014603 263 RLGWLVTSDPNGILQDSGIVDSIKSFL--------NISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLK 334 (422)
Q Consensus 263 r~G~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~ 334 (422)
+|++++++. ..+.+.... ...++++...+.++..+++.. ..++++..++++++++.+.+.|+
T Consensus 232 -~G~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~-~~~~~~~~~~~~~~~~~l~~~L~ 301 (423)
T 3lvm_A 232 -IGALYVRRK--------PRVRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRIA-KEEMATEMERLRGLRNRLWNGIK 301 (423)
T ss_dssp -CEEEEECBT--------TBCCCCCSSCSSCTTTTTCCSCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHT
T ss_pred -eEEEEEecc--------ccCCCCccccCCcccccccCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHh
Confidence 899998642 222222211 123456667777777777643 23478889999999999999999
Q ss_pred cCCCCCCCCCCCC---ceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC-------------------CCe
Q 014603 335 EIPCITCPKKPEG---SMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL-------------------KDW 392 (422)
Q Consensus 335 ~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~-------------------~~~ 392 (422)
++|++.+. .+.. +.++++.++.. +..++...+ .+ |.+.+|..|.. .++
T Consensus 302 ~~~~~~~~-~~~~~~~~~~~~~~~~~~------~~~~l~~~l-~~--i~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~ 371 (423)
T 3lvm_A 302 DIEEVYLN-GDLEHGAPNILNVSFNYV------EGESLIMAL-KD--LAVSSGSACTSASLEPSYVLRALGLNDELAHSS 371 (423)
T ss_dssp TSTTEEEE-SCSTTBCTTEEEEEETTS------CHHHHHHHT-TT--EECBCCCC-----CCCCHHHHHHTCCHHHHHTE
T ss_pred cCCCEEEe-CCccccCCCeEEEEeCCC------CHHHHHHHH-hh--heeccCccccCCCccccHHHHHhCCCccccCce
Confidence 99887743 3332 23455555421 456665554 44 99999877543 388
Q ss_pred EEEEec--cChHHHHHHHHHHHHHHHHhcc
Q 014603 393 LRITFA--VEPSALEDGLGRMKAFYDRHAK 420 (422)
Q Consensus 393 iRis~~--~~~~~l~~~~~~l~~~~~~~~~ 420 (422)
+||+++ ++++++++++++|+++++++++
T Consensus 372 iRi~~~~~~t~e~i~~~~~~l~~~~~~~~~ 401 (423)
T 3lvm_A 372 IRFSLGRFTTEEEIDYTIELVRKSIGRLRD 401 (423)
T ss_dssp EEEECCTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHHHHhhc
Confidence 999998 5789999999999999987754
No 94
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=100.00 E-value=4.3e-34 Score=270.82 Aligned_cols=328 Identities=15% Similarity=0.108 Sum_probs=246.4
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhC-CC---CCCC--CCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEe
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRS-AR---FNCY--SSTVGILPARRAIADYLNRDLPYKLSPDDVYLT 116 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~-~~---~~~y--~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~ 116 (422)
++..+|||+.|.+ +++++++.+.+++.+.+.. .. ...| +...+..++|+++++++ +++ +.+++
T Consensus 37 ~g~~~id~~~~~~---~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~------g~~--~~i~~ 105 (384)
T 1bs0_A 37 DDRQYLNFSSNDY---LGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWL------GYS--RALLF 105 (384)
T ss_dssp TTEEEEECSCCCT---TSGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHH------TCS--EEEEE
T ss_pred CCceEEEeeccCc---cCCCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHh------CCC--cEEEe
Confidence 4667899999863 2346788999999988765 21 1123 34466789999999998 333 45666
Q ss_pred cCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCC---ceEEEEeCCC
Q 014603 117 LGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADEN---TVALVIINPG 193 (422)
Q Consensus 117 ~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~---~~~i~i~~p~ 193 (422)
++|++++..++++++++||.|+++.|+|..+...++..|.+++.++. .|++.|++.+++. ++++++++|+
T Consensus 106 ~sGt~a~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~v~~~~~~ 178 (384)
T 1bs0_A 106 ISGFAANQAVIAAMMAKEDRIAADRLSHASLLEAASLSPSQLRRFAH-------NDVTHLARLLASPCPGQQMVVTEGVF 178 (384)
T ss_dssp SCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTSSSEEEEECT-------TCHHHHHHHHHSCCSSCEEEEEESBC
T ss_pred CCcHHHHHHHHHHhCCCCcEEEEcccccHHHHHHHHHcCCCEEEeCC-------CCHHHHHHHHHhcCCCCeEEEEeCCC
Confidence 66699999999999999999999999999998888989999888763 4788998887653 6788888999
Q ss_pred CCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccC--CCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeC
Q 014603 194 NPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFG--NTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD 271 (422)
Q Consensus 194 nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~--~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~ 271 (422)
||||.+++ +++|.++|+++|+++|+||+|+.+.+. +... ...++.. ..++++|+||+++++| ||++++
T Consensus 179 nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~--~~~~~~~-~di~~~s~sK~~~~~G---G~~~~~- 248 (384)
T 1bs0_A 179 SMDGDSAP---LAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGS--CWLQKVK-PELLVVTFGKGFGVSG---AAVLCS- 248 (384)
T ss_dssp TTTCCBCC---HHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCH--HHHTTCC-CSEEEEESSSTTSSCC---EEEEEC-
T ss_pred CCCCCccC---HHHHHHHHHHcCcEEEEECCcccceecCCCCch--HHhcCCC-CcEEEeeccchhhccC---cEEEeC-
Confidence 99999987 778899999999999999999865432 2211 1122211 2389999999998777 999985
Q ss_pred CCCcccchhHHHHHHhhh-hh--ccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCc
Q 014603 272 PNGILQDSGIVDSIKSFL-NI--SSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGS 348 (422)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g 348 (422)
+++++.+.... .. +.+++++.+.++.++++...+.+.++.+++++++++.+.+.|+++ ++. + .+..+
T Consensus 249 -------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~-~~~~~ 318 (384)
T 1bs0_A 249 -------STVADYLLQFARHLIYSTSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDL-PFT-L-ADSCS 318 (384)
T ss_dssp -------HHHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTS-SCE-E-CSCCS
T ss_pred -------HHHHHHHHHhchhhhcCCCCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhc-CCc-c-cCCCC
Confidence 46777776542 12 235778888888888875322256788899999999999999988 666 3 24556
Q ss_pred eEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC---CCeEEEEec--cChHHHHHHHHHHHHH
Q 014603 349 MFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL---KDWLRITFA--VEPSALEDGLGRMKAF 414 (422)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~---~~~iRis~~--~~~~~l~~~~~~l~~~ 414 (422)
.++|+.++.. .+..++...+.+ +||.+.++..++. .+++||+++ ++++++++++++|+++
T Consensus 319 ~~~~~~~~~~-----~~~~~l~~~l~~-~gi~v~~~~~~~~~~~~~~~Ri~~~~~~~~~~i~~~~~~l~~~ 383 (384)
T 1bs0_A 319 AIQPLIVGDN-----SRALQLAEKLRQ-QGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGN 383 (384)
T ss_dssp SBCCEEEESH-----HHHHHHHHHHHH-TTEECCEECTTSSCTTCEEECCBCCTTCCHHHHHHHHHHHHHH
T ss_pred CEEEEEeCCH-----HHHHHHHHHHHH-CCcEEEeecCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHhh
Confidence 6777777532 134566666654 5999999887653 378999998 4899999999998764
No 95
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=100.00 E-value=4.7e-34 Score=271.64 Aligned_cols=322 Identities=12% Similarity=0.073 Sum_probs=244.2
Q ss_pred CCCcHHHHHHHHHHhhCCCCCCCCCC--CCCHHHHHHHHHHHhhcCCCCCCCC-CEEEecCHHHHHHHHHHHhcCCCCEE
Q 014603 61 FRTASVAVDAIVHSVRSARFNCYSST--VGILPARRAIADYLNRDLPYKLSPD-DVYLTLGCTQAIEVILTVLARPGANI 137 (422)
Q Consensus 61 ~~~~~~v~~a~~~~~~~~~~~~y~~~--~g~~~lr~~ia~~l~~~~~~~~~~~-~i~~~~g~~~a~~~~~~~l~~~gd~V 137 (422)
.++++.+.+++.+.+.. .|.+. ....++|+++++++ +.+++ +|++|+|+++++..++.+++++||+|
T Consensus 27 ~~~~~~v~~a~~~~~~~----~~~~~~~~~~~~l~~~la~~~------~~~~~~~v~~~~g~t~al~~~~~~~~~~gd~v 96 (396)
T 2ch1_A 27 SNCSKRVLTAMTNTVLS----NFHAELFRTMDEVKDGLRYIF------QTENRATMCVSGSAHAGMEAMLSNLLEEGDRV 96 (396)
T ss_dssp CCCCHHHHHHTTSCCCC----TTCHHHHHHHHHHHHHHHHHH------TCCCSCEEEESSCHHHHHHHHHHHHCCTTCEE
T ss_pred CCCCHHHHHHhcccccc----CCChhHHHHHHHHHHHHHHHh------CCCCCcEEEECCcHHHHHHHHHHHhcCCCCeE
Confidence 35678888888765432 24331 23789999999999 45666 89999999999999999999999999
Q ss_pred EecCCCccchH--HHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC-CceEEEEeCCCCCcccccCHHHHHHHHHHHHH
Q 014603 138 LLPRPGFPYYE--ARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE-NTVALVIINPGNPCGNVYTYQHLQKIAETAKK 214 (422)
Q Consensus 138 l~~~~~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~ 214 (422)
++++|+|+++. ..++..|.+++.++.++ ++.+|++.+++.+++ +++++++++|+||||.+++ +++|.++|++
T Consensus 97 l~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~---~~~i~~l~~~ 171 (396)
T 2ch1_A 97 LIAVNGIWAERAVEMSERYGADVRTIEGPP--DRPFSLETLARAIELHQPKCLFLTHGDSSSGLLQP---LEGVGQICHQ 171 (396)
T ss_dssp EEEESSHHHHHHHHHHHHTTCEEEEEECCT--TSCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHH
T ss_pred EEEcCCcccHHHHHHHHHcCCceEEecCCC--CCCCCHHHHHHHHHhCCCCEEEEECCCCCCceecC---HHHHHHHHHH
Confidence 99999999874 46778899999998753 456899999998877 7899999999999999987 7888899999
Q ss_pred cCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhh------
Q 014603 215 LGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSF------ 288 (422)
Q Consensus 215 ~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~------ 288 (422)
+|+++|+|++|+. +.....+..++. .+++.|++|.++. +.++|+++++ +++++.+...
T Consensus 172 ~~~~li~Dea~~~----g~~~~~~~~~~~---d~~~~s~~K~~~~-~~g~g~~~~~--------~~~~~~~~~~~~~~~~ 235 (396)
T 2ch1_A 172 HDCLLIVDAVASL----CGVPFYMDKWEI---DAVYTGAQKVLGA-PPGITPISIS--------PKALDVIRNRRTKSKV 235 (396)
T ss_dssp TTCEEEEECTTTB----TTBCCCTTTTTC---CEEECCCC-CCCC-CSSCEEEEEC--------HHHHHHHHTCSSCCSC
T ss_pred cCCEEEEEccccc----cCCccchhhcCc---CEEEEcCCccccC-CCCeEEEEEC--------HHHHHhhhhccCcccc
Confidence 9999999999984 222223333332 2677899997543 2346999886 3555555321
Q ss_pred ------------------hhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCC---
Q 014603 289 ------------------LNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEG--- 347 (422)
Q Consensus 289 ------------------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~--- 347 (422)
....++++...+.++.++++...+.++++.+++++++++.+.+.|+++ ++.+. .+.+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~ 313 (396)
T 2ch1_A 236 FYWDLLLLGNYWGCYDEPKRYHHTVASNLIFALREALAQIAEEGLENQIKRRIECAQILYEGLGKM-GLDIF-VKDPRHR 313 (396)
T ss_dssp GGGCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-TCCBS-SCSGGGB
T ss_pred eEechHHHHHhhhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHC-CCeec-cCCcccc
Confidence 011235677788888888876444568888999999999999999988 77633 4443
Q ss_pred -ceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEe-c--cChHHHHHHHHHHHHHHHHhcc
Q 014603 348 -SMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITF-A--VEPSALEDGLGRMKAFYDRHAK 420 (422)
Q Consensus 348 -g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~-~--~~~~~l~~~~~~l~~~~~~~~~ 420 (422)
+.++++.++.. .+..++...|++++||.+.+|..+...+++||++ + ++++++++++++|+++++++..
T Consensus 314 ~~~~~~~~~~~~-----~~~~~~~~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~l~~~~~ 385 (396)
T 2ch1_A 314 LPTVTGIMIPKG-----VDWWKVSQYAMNNFSLEVQGGLGPTFGKAWRVGIMGECSTVQKIQFYLYGFKESLKATHP 385 (396)
T ss_dssp CTTEEEEECCTT-----CCHHHHHHHHHHHHCBCCBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHHCT
T ss_pred CCceEEEEcCCC-----CCHHHHHHHHHHhCCEEEecCccccCCCEEEEECCCCcCCHHHHHHHHHHHHHHHHHhCc
Confidence 24777777532 2567777777666799999988766678999999 4 4789999999999999987653
No 96
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=100.00 E-value=1.8e-33 Score=266.20 Aligned_cols=335 Identities=16% Similarity=0.097 Sum_probs=244.2
Q ss_pred eeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCC---CCCC----CCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHH
Q 014603 48 IPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFN---CYSS----TVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT 120 (422)
Q Consensus 48 i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~---~y~~----~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~ 120 (422)
+.|+.+.++ ++++.+++++.+.+.+...+ .|.. .....++|+++++++ +++++++++|+|++
T Consensus 2 ~yld~~~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~v~~~~g~t 70 (382)
T 4eb5_A 2 AYFDYTSAK-----PVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLV------NGGGGTVVFTSGAT 70 (382)
T ss_dssp CBCBTTTCC-----CCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHH------TCTTEEEEEESSHH
T ss_pred eeeccCCCC-----CCCHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEcCchH
Confidence 345555433 67899999999988752111 1332 134678888999988 45678999999999
Q ss_pred HHHHHHHHHhc----CCCCEEEecCCCccchHHHHh---hCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCC
Q 014603 121 QAIEVILTVLA----RPGANILLPRPGFPYYEARAT---HSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPG 193 (422)
Q Consensus 121 ~a~~~~~~~l~----~~gd~Vl~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~ 193 (422)
+|+..++.++. ++||+|++++|+|+++...+. ..|.+++.+++++ ++.+|++.|++.++++++++++++|+
T Consensus 71 ~a~~~~~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~~~ 148 (382)
T 4eb5_A 71 EANNLAIIGYAMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGK--YGEVDVSFIDQKLRDDTILVSVQHAN 148 (382)
T ss_dssp HHHHHHHHHHHHHHGGGCCEEEEETTCCHHHHHHHHHHTTTTCEEEEECBCT--TSCBCHHHHHHHCCTTEEEEECCSBC
T ss_pred HHHHHHHHHHHhhccCCCCEEEECCCcchHHHHHHHHHHhCCcEEEEeccCC--CCccCHHHHHHHhcCCCeEEEEeccC
Confidence 99999999987 899999999999988766554 3688999888753 45689999999998889999999999
Q ss_pred CCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCC
Q 014603 194 NPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPN 273 (422)
Q Consensus 194 nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~ 273 (422)
||||.+++ +++|.++|+++|++ |+|++|+. +....++..++ ..+++.|+||+++.+| +|++++++..
T Consensus 149 nptG~~~~---l~~i~~l~~~~~~~-i~D~a~~~----g~~~~~~~~~~---~di~~~s~sK~~g~~g--~G~~~~~~~~ 215 (382)
T 4eb5_A 149 NEIGTIQP---VEEISEVLAGKAAL-HIDATASV----GQIEVDVEKIG---ADMLTISSNDIYGPKG--VGALWIRKEA 215 (382)
T ss_dssp TTTCBBCC---HHHHHHHHTTSSEE-EEECTTTB----TTBCCCHHHHT---CSEEEEETGGGTCCSS--CEEEEEETTC
T ss_pred CCccccCC---HHHHHHHHHHCCCE-EEEcchhc----CCcccCccccC---CCEEEeehHHhcCCCc--eEEEEEcccc
Confidence 99999986 67889999999999 99999984 22112222222 3488999999976666 7999887532
Q ss_pred CcccchhHHHHH-HhhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCC---ce
Q 014603 274 GILQDSGIVDSI-KSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEG---SM 349 (422)
Q Consensus 274 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~---g~ 349 (422)
.+. ...... .......++++...+.++..+++... .++++.+++++++++.+.+.|+++|++.+. .+.+ +.
T Consensus 216 ~l~---~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~ 290 (382)
T 4eb5_A 216 KLQ---PVILGGGQENGLRSGSENVPSIVGFGKAAEITA-MEWREEAERLRRLRDRIIDNVLKIEESYLN-GHPEKRLPN 290 (382)
T ss_dssp CCC---CSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTTSTTEEEC-SCSSSBCTT
T ss_pred ccC---ceecCCCccccccCCCccHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHhhCCCeEEe-CCcccCCCC
Confidence 111 000000 00111234566666777777776433 357888899999999999999998887633 4431 44
Q ss_pred EEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC-------------------CCeEEEEec--cChHHHHHHH
Q 014603 350 FVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL-------------------KDWLRITFA--VEPSALEDGL 408 (422)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~-------------------~~~iRis~~--~~~~~l~~~~ 408 (422)
++++.++. .+..++...+ .++||.+.+|..|.. .+++||+++ ++++++++++
T Consensus 291 ~~~~~~~~------~~~~~~~~~l-~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~ 363 (382)
T 4eb5_A 291 NVNVRFSY------IEGESIVLSL-DMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLL 363 (382)
T ss_dssp EEEEEETT------SCHHHHHHHH-HHHTCBCBCCCGGGTSSCCCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHH
T ss_pred EEEEEeCC------cCHHHHHHHH-HHCCEEEeccccccCCCCcccHHHHHcCCChhccCCeEEEECCCCCCHHHHHHHH
Confidence 66777652 1466777766 467999999876432 479999998 6899999999
Q ss_pred HHHHHHHHHhcc
Q 014603 409 GRMKAFYDRHAK 420 (422)
Q Consensus 409 ~~l~~~~~~~~~ 420 (422)
++|+++++++++
T Consensus 364 ~~l~~~~~~~~~ 375 (382)
T 4eb5_A 364 EVLPGVIERLRS 375 (382)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999987754
No 97
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=100.00 E-value=5.5e-34 Score=271.65 Aligned_cols=335 Identities=16% Similarity=0.125 Sum_probs=243.3
Q ss_pred CCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCC------CCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEec
Q 014603 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSAR------FNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTL 117 (422)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~------~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~ 117 (422)
|.++++|..++.. .++.+|.+.+++.+++.... ...|+...+..++|++++++++ . +++|++++
T Consensus 45 g~~~i~~~~~~~~---~~~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~------~-~~~i~~~s 114 (401)
T 2bwn_A 45 KQDITVWCGNDYL---GMGQHPVVLAAMHEALEAVGAGSGGTRNISGTTAYHRRLEAEIAGLHQ------K-EAALVFSS 114 (401)
T ss_dssp EEEEEECSCSCTT---SGGGCHHHHHHHHHHHHHHCSCCCSBTTTBCCBHHHHHHHHHHHHHTT------C-SEEEEESC
T ss_pred CCcEEEeeCCCcc---cCCCCHHHHHHHHHHHHHcCCCCCCcCcccCChHHHHHHHHHHHHHhC------C-CcEEEECC
Confidence 4567888876532 24456789999999886411 1235555678899999999983 2 46777776
Q ss_pred CHHHHHHHHHHHhc--CCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhc----CCceEEEEeC
Q 014603 118 GCTQAIEVILTVLA--RPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALAD----ENTVALVIIN 191 (422)
Q Consensus 118 g~~~a~~~~~~~l~--~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~----~~~~~i~i~~ 191 (422)
|++ ++..++..+. .+||+|+++.|+|+++...++..|.+++.++.+ |++.+++.++ ++++++++++
T Consensus 115 G~~-a~~~~~~~l~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~le~~l~~~~~~~~~~v~~~~ 186 (401)
T 2bwn_A 115 AYN-ANDATLSTLRVLFPGLIIYSDSLNHASMIEGIKRNAGPKRIFRHN-------DVAHLRELIAADDPAAPKLIAFES 186 (401)
T ss_dssp HHH-HHHHHHHHHHHHSTTCEEEEETTCCHHHHHHHHHSCCCEEEECTT-------CHHHHHHHHHHSCTTSCEEEEEES
T ss_pred cHH-HHHHHHHHHhcCCCCCEEEECchhhHHHHHHHHHcCCeEEEEcCC-------CHHHHHHHHHhhccCCceEEEEec
Confidence 666 7777776653 589999999999999988888899998888752 6778887765 5788999999
Q ss_pred CCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCC-CCCeEEEecCccccCCCCceeEEEEee
Q 014603 192 PGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IVPVLTLGSISKRWIVPGWRLGWLVTS 270 (422)
Q Consensus 192 p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~-~~~~i~i~s~sK~~~~~G~r~G~~~~~ 270 (422)
|+||||.+++ +++|.++|+++|+++|+||+|+...++......+...+. ....++++|+||.|+++| ||++++
T Consensus 187 ~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~g~~~~~~~~~~~~~~i~~~s~sK~~~~~G---G~~~~~ 260 (401)
T 2bwn_A 187 VYSMDGDFGP---IKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGVFG---GYIAAS 260 (401)
T ss_dssp BCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTTCSCC---EEEEEC
T ss_pred CcCCCCCcCC---HHHHHHHHHHcCCEEEEeccccccccCCCCceeeeccCccccCcEEEeechhhccCCC---CEEecC
Confidence 9999999986 788899999999999999999954443221111111121 123588999999998888 999885
Q ss_pred CCCCcccchhHHHHHHhhh---hhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCC
Q 014603 271 DPNGILQDSGIVDSIKSFL---NISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEG 347 (422)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~ 347 (422)
+++.+.+.... ....+.+++.+.++.++++...+..+++.+++++++++.+.+.|+++ ++.+. .+.+
T Consensus 261 --------~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~ 330 (401)
T 2bwn_A 261 --------ARMVDAVRSYAPGFIFSTSLPPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKAL-GMPII-DHGS 330 (401)
T ss_dssp --------HHHHHHHHHHCHHHHTSBCCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHH-TCCBC-CCSS
T ss_pred --------HHHHHHHHHhCcCceecCCCCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHC-CCccc-CCCC
Confidence 46666665432 12223345777777777765433446788889999999999999987 77633 5554
Q ss_pred ceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCC---CeEEEEec--cChHHHHHHHHHHHHHHHHh
Q 014603 348 SMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLK---DWLRITFA--VEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 348 g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~---~~iRis~~--~~~~~l~~~~~~l~~~~~~~ 418 (422)
.++|+.++.. .+..++...+++++||.+.|+..|+.+ +++|++++ ++++++++++++|+++++++
T Consensus 331 -~~~~~~~~~~-----~~~~~~~~~L~~~~gi~v~~~~~~~~~~~~~~iRis~~~~~t~~~i~~~~~~l~~~~~~~ 400 (401)
T 2bwn_A 331 -HIVPVVIGDP-----VHTKAVSDMLLSDYGVYVQPINFPTVPRGTERLRFTPSPVHDLKQIDGLVHAMDLLWARC 400 (401)
T ss_dssp -SCEEEECCCH-----HHHHHHHHHHHHHHCEECCEECTTTSCTTCCEEEECCCTTSCHHHHHHHHHHHHHHC---
T ss_pred -CeEEEEeCCh-----HHHHHHHHHHHhcCCEEEeecCCCCCCCCCceEEEEeeCCCCHHHHHHHHHHHHHHHHhc
Confidence 4788888632 134566666655679999998876543 58999998 68999999999999887653
No 98
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=100.00 E-value=8.6e-34 Score=270.32 Aligned_cols=333 Identities=15% Similarity=0.113 Sum_probs=250.4
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhC-CCC---CCCC--CCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEe
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRS-ARF---NCYS--STVGILPARRAIADYLNRDLPYKLSPDDVYLT 116 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~-~~~---~~y~--~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~ 116 (422)
++..+|||+.+.+- +++.++.+.+++.+.+.. ... ..|. ...+..++|+++++++ +++ + .+++
T Consensus 43 ~g~~~id~~~~~~~---g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~------g~~-~-~i~~ 111 (401)
T 1fc4_A 43 DGSHVINFCANNYL---GLANHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFL------GME-D-AILY 111 (401)
T ss_dssp TSCEEEECCCSCTT---SCTTCHHHHHHHHHHHHHHCSCCCSCHHHHCCBHHHHHHHHHHHHHH------TCS-E-EEEE
T ss_pred CCccEEEeeccCcc---cccCCHHHHHHHHHHHHHhCCCCCCCCcccCCcHHHHHHHHHHHHHh------CCC-c-EEEe
Confidence 47789999999532 223589999999988764 211 1221 1356789999999999 334 4 4455
Q ss_pred cCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC------CceEEEEe
Q 014603 117 LGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE------NTVALVII 190 (422)
Q Consensus 117 ~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~i~i~ 190 (422)
++|++++..++++++++||.|+++.|+|..+...++..|.+++.++. .|++.+++.+++ ++++++++
T Consensus 112 ~sGs~a~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~~~v~~~ 184 (401)
T 1fc4_A 112 SSCFDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYAN-------NDMQELEARLKEAREAGARHVLIATD 184 (401)
T ss_dssp SCHHHHHHTTHHHHCCTTCEEEEETTCCHHHHHHHHTSCSEEEEECT-------TCHHHHHHHHHHHHHTTCSSEEEEEE
T ss_pred CChHHHHHHHHHHHcCCCCEEEEcchhHHHHHHHHHHcCCceEEECC-------CCHHHHHHHHHHhhccCCCceEEEEe
Confidence 66688999999999999999999999998888888888998887762 478888887754 68899999
Q ss_pred CCCCCcccccCHHHHHHHHHHHHHcCcEEEEccccc-cccc-CCCCCCCccccCCCCCeEEEecCcccc-CCCCceeEEE
Q 014603 191 NPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYD-HLAF-GNTPFVPMGVFGSIVPVLTLGSISKRW-IVPGWRLGWL 267 (422)
Q Consensus 191 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~-~~~~-~~~~~~~~~~~~~~~~~i~i~s~sK~~-~~~G~r~G~~ 267 (422)
+|+||||.+++ +++|.++|+++|+++|+||+|+ ++.+ ++........+.. +..++++|+||++ +++| ||+
T Consensus 185 ~~~nptG~~~~---~~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~-~~di~~~s~sK~~~~~~g---G~~ 257 (401)
T 1fc4_A 185 GVFSMDGVIAN---LKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMG-RVDIITGTLGKALGGASG---GYT 257 (401)
T ss_dssp SEETTTTEECC---HHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTT-CCSEEEEESSSTTCSSSC---EEE
T ss_pred CCcCCCCCCCC---HHHHHHHHHHcCCEEEEECcccccccCCCCCccHHHcCCCc-CCcEEEecchhhccCCCC---EEE
Confidence 99999999987 8888999999999999999996 6542 3332211122222 2358999999998 5555 999
Q ss_pred EeeCCCCcccchhHHHHHHhhh---hhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC
Q 014603 268 VTSDPNGILQDSGIVDSIKSFL---NISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKK 344 (422)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 344 (422)
+++ +++++.+.... ..+.+++.+.++++.++++... ..++.+++++++++.+.+.|+++ ++. + .
T Consensus 258 ~~~--------~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~l~~~L~~~-g~~-~-~ 324 (401)
T 1fc4_A 258 AAR--------KEVVEWLRQRSRPYLFSNSLAPAIVAASIKVLEMVE--AGSELRDRLWANARQFREQMSAA-GFT-L-A 324 (401)
T ss_dssp EEC--------HHHHHHHHHHCHHHHHSCCCCHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHHHHHT-TCC-B-C
T ss_pred EcC--------HHHHHHHHHhCcCceeCCCCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHc-CCc-c-c
Confidence 985 46777776543 1245778889999888887522 14677888999999999999988 776 3 2
Q ss_pred CCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC---CCeEEEEec--cChHHHHHHHHHHHHHHHHhc
Q 014603 345 PEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL---KDWLRITFA--VEPSALEDGLGRMKAFYDRHA 419 (422)
Q Consensus 345 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~---~~~iRis~~--~~~~~l~~~~~~l~~~~~~~~ 419 (422)
+..+.++|+.++.. .+..++...+. ++||.+.+|..|+. .+++||+++ ++++++++++++|+++++++.
T Consensus 325 ~~~~~~~~~~~~~~-----~~~~~l~~~l~-~~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 398 (401)
T 1fc4_A 325 GADHAIIPVMLGDA-----VVAQKFARELQ-KEGIYVTGFFYPVVPKGQARIRTQMSAAHTPEQITRAVEAFTRIGKQLG 398 (401)
T ss_dssp CSSSSEEEEEEECH-----HHHHHHHHHHH-HTTEECCEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCCEEEEEcCCh-----HHHHHHHHHHH-HCCcEEeeecCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHhC
Confidence 66788889888632 03455666664 55999999887754 358999998 689999999999999998764
No 99
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=100.00 E-value=4.1e-35 Score=276.50 Aligned_cols=326 Identities=13% Similarity=0.099 Sum_probs=241.0
Q ss_pred CCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCC--------CCCCCCCCCCHHHHHH-HHHHHhhcCCCCCCCCCEE
Q 014603 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSAR--------FNCYSSTVGILPARRA-IADYLNRDLPYKLSPDDVY 114 (422)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~--------~~~y~~~~g~~~lr~~-ia~~l~~~~~~~~~~~~i~ 114 (422)
.+++++|+.|.+. .++++.+.+++.+.+.... ...|.+..+..++|++ ++++++ .+ +|+
T Consensus 6 ~~~~i~ld~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~la~~~~------~~--~v~ 73 (371)
T 2e7j_A 6 TKDFINIDPLQTG----GKLTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFLG------CD--VAR 73 (371)
T ss_dssp --CCEECCHHHHT----CCCCHHHHHHHHHC--------------------CCHHHHHHTHHHHHTT------SS--EEE
T ss_pred CCCcEEecccccC----CCCCHHHHHHHHHHHhhcccCCccccccchhhHHHHHHHHHHHHHHHHcC------CC--EEE
Confidence 4567888886533 3678999999998876531 1234456788999999 999983 33 899
Q ss_pred EecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEee--ccCCCCcccCHHHHHHhhc-----CCceEE
Q 014603 115 LTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFD--LLPAKGWEVDLDAVEALAD-----ENTVAL 187 (422)
Q Consensus 115 ~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~d~~~l~~~~~-----~~~~~i 187 (422)
+|+|+++|+..++++++++||+|++++|+|+++...++..|.+++.++ .+ .++.+|++.|++.++ ++++++
T Consensus 74 ~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~~~d~~~l~~~l~~~~~~~~~~~v 151 (371)
T 2e7j_A 74 VTNGAREAKFAVMHSLAKKDAWVVMDENCHYSSYVAAERAGLNIALVPKTDY--PDYAITPENFAQTIEETKKRGEVVLA 151 (371)
T ss_dssp EESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTTCEEEEECCCCT--TTCCCCHHHHHHHHHHHTTTSCEEEE
T ss_pred EeCChHHHHHHHHHHHhCCCCEEEEccCcchHHHHHHHHcCCeEEEeecccC--CCCCcCHHHHHHHHHhhcccCCeEEE
Confidence 999999999999999999999999999999999888999999999988 54 346789999999887 688999
Q ss_pred EEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEE
Q 014603 188 VIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWL 267 (422)
Q Consensus 188 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~ 267 (422)
++++|+||||.+++ +++|.++|+++|+++|+|++|+.+.. ..++..++. .++++|+||+++++ .|+||+
T Consensus 152 ~~~~~~nptG~~~~---~~~i~~~~~~~~~~li~D~a~~~~~~----~~~~~~~~~---di~~~s~sK~~~~~-~~~G~~ 220 (371)
T 2e7j_A 152 LITYPDGNYGNLPD---VKKIAKVCSEYDVPLLVNGAYAIGRM----PVSLKEIGA---DFIVGSGHKSMAAS-GPIGVM 220 (371)
T ss_dssp EEESSCTTTCCCCC---HHHHHHHHHTTTCCEEEECTTTBTTB----CCCHHHHTC---SEEEEEHHHHSSCC-SSCEEE
T ss_pred EEECCCCCCcccCC---HHHHHHHHHHcCCeEEEECccccCCC----CCChhhcCC---CEEEecCCcCCCCC-CCcEEE
Confidence 99999999999987 58888999999999999999987432 122333333 38999999987655 499999
Q ss_pred EeeCCCCcccchhHHHH-HHhhhh---h-----ccCcchHHHHHHHHHHhhchHHHHHHHHHHH--HHHHHHHHHHhhcC
Q 014603 268 VTSDPNGILQDSGIVDS-IKSFLN---I-----SSDPATFIQGAVPQILEKTEEEFFSKITDIL--RETADICCDRLKEI 336 (422)
Q Consensus 268 ~~~~~~~~~~~~~~~~~-~~~~~~---~-----~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~--~~~~~~l~~~L~~~ 336 (422)
++++ +++++ +..... . .++++...+.++..+++...+ +..+++ +++++.+.+.|+++
T Consensus 221 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~~l~~~L~~~ 288 (371)
T 2e7j_A 221 GMKE--------EWAEIVLRRSEKYKNKEVELLGCTARGATIITLMASFPHVRE----RIKRWDEEVEKARRFAAEMEKL 288 (371)
T ss_dssp EECT--------TTTTTTTCBCSSCTTSBGGGTTCCCCSHHHHHHHHHHHHHHH----HGGGHHHHHHHHHHHHHHHHHT
T ss_pred EEec--------hhhhhhccccccCcccccccccCCcCHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHc
Confidence 9974 23333 332221 1 345566666666667764221 566677 88889999999887
Q ss_pred CCCCCCCCCC--CceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC------CCeEE-EEec---cChHHH
Q 014603 337 PCITCPKKPE--GSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL------KDWLR-ITFA---VEPSAL 404 (422)
Q Consensus 337 ~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~------~~~iR-is~~---~~~~~l 404 (422)
++.+. .|. .+.++|+.++ +..++...+ .++||.+.| ..+.. ++++| ++++ ++++++
T Consensus 289 -~~~~~-~~~~~~~~~~~~~~~--------~~~~~~~~l-~~~gi~~~~-~~~~~~~~g~~~~~iRii~~~~~~~~~~~i 356 (371)
T 2e7j_A 289 -GIKQL-GDNPHNHDLMFFHAE--------VLYEISKKA-KGGRFFLYR-ELKSRKIHGIKPGLTRYFKLSTYGLSDEEV 356 (371)
T ss_dssp -TCEEE-SSSSCCSSEEEEECH--------HHHHHHHHS-SSGGGHHHH-HHHHTTEECSCTTCCSEEEEECTTCCHHHH
T ss_pred -CcEEe-cCCCccCceEEEECC--------CHHHHHHHH-HHCCEEEEe-ccccccccCCCCCceEEEEeeccCCCHHHH
Confidence 77633 342 3568888875 245566655 477999988 33322 67899 9998 589999
Q ss_pred HHHHHHHHHHHHHh
Q 014603 405 EDGLGRMKAFYDRH 418 (422)
Q Consensus 405 ~~~~~~l~~~~~~~ 418 (422)
++++++|+++++++
T Consensus 357 ~~~~~~l~~~~~~~ 370 (371)
T 2e7j_A 357 DYVLNAFKEIIEKY 370 (371)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999998764
No 100
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=100.00 E-value=2e-33 Score=265.80 Aligned_cols=336 Identities=15% Similarity=0.097 Sum_probs=238.1
Q ss_pred eeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCC---CCCC----CCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHH
Q 014603 48 IPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFN---CYSS----TVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT 120 (422)
Q Consensus 48 i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~---~y~~----~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~ 120 (422)
|.|+.+... ++++.+.+++.+.+.....+ .|.. .....++++.+++++ +++++++++|+|++
T Consensus 2 iyld~~~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~------~~~~~~i~~~~g~~ 70 (382)
T 4hvk_A 2 AYFDYTSAK-----PVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLV------NGGGGTVVFTSGAT 70 (382)
T ss_dssp CBCBTTTCC-----CCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHT------TCTTEEEEEESSHH
T ss_pred EeecCCCcC-----CCCHHHHHHHHHHHHhhcCCCcccchHHHHHHHHHHHHHHHHHHHc------CCCcCeEEEECCch
Confidence 455555433 66789999999988652111 1110 112336777777776 45678899999999
Q ss_pred HHHHHHHHHhc----CCCCEEEecCCCccchHHHHhh---CCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCC
Q 014603 121 QAIEVILTVLA----RPGANILLPRPGFPYYEARATH---SHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPG 193 (422)
Q Consensus 121 ~a~~~~~~~l~----~~gd~Vl~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~ 193 (422)
+++..+++++. ++||+|+++.++|+++...+.. .|.+++.++.+. ++.+|++.|++.++++++++++++|+
T Consensus 71 ~a~~~~~~~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~~~ 148 (382)
T 4hvk_A 71 EANNLAIIGYAMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGK--YGEVDVSFIDQKLRDDTILVSVQHAN 148 (382)
T ss_dssp HHHHHHHHHHHHHHGGGCCEEEEETTCCHHHHHHHHHHHHTTCEEEEECBCT--TSCBCHHHHHHHCCTTEEEEECCSBC
T ss_pred HHHHHHHHHhhhhhcCCCCEEEECCCCcHHHHHHHHHHHhcCCEEEEeccCC--CCCcCHHHHHHHhccCceEEEEECCC
Confidence 99999999987 8999999999999988665443 689999998763 45689999999999899999999999
Q ss_pred CCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCC
Q 014603 194 NPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPN 273 (422)
Q Consensus 194 nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~ 273 (422)
||||.+++ +++|.++|+++|+ +|+|++|+. +....++...+. .+++.|+||+++++| +|++++++..
T Consensus 149 nptG~~~~---~~~i~~l~~~~~~-li~D~a~~~----~~~~~~~~~~~~---d~~~~s~~K~~g~~g--~g~~~~~~~~ 215 (382)
T 4hvk_A 149 NEIGTIQP---VEEISEVLAGKAA-LHIDATASV----GQIEVDVEKIGA---DMLTISSNDIYGPKG--VGALWIRKEA 215 (382)
T ss_dssp TTTCBBCC---HHHHHHHHSSSSE-EEEECTTTB----TTBCCCHHHHTC---SEEEEESGGGTSCTT--CEEEEEETTC
T ss_pred CCceeeCC---HHHHHHHHHHcCE-EEEEhHHhc----CCCCCCchhcCC---CEEEEeHHHhcCCCc--eEEEEEcCcc
Confidence 99999976 6788889999999 999999875 221222222232 389999999876666 6777776432
Q ss_pred CcccchhHHHHHHhhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCC---ceE
Q 014603 274 GILQDSGIVDSIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEG---SMF 350 (422)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~---g~~ 350 (422)
... +.+...........++++...+.++..+++. ...++++..++++++++.+.+.|+++|++.+. .+.. +.+
T Consensus 216 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~ 291 (382)
T 4hvk_A 216 KLQ--PVILGGGQENGLRSGSENVPSIVGFGKAAEI-TAMEWREEAERLRRLRDRIIDNVLKIEESYLN-GHPEKRLPNN 291 (382)
T ss_dssp CCC--CSSCSSCTGGGTSCSCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEC-SCSSSBCTTE
T ss_pred CcC--cccccCCCcCccccCCcCHHHHHHHHHHHHH-HHhhHHHHHHHHHHHHHHHHHHHhcCCCeEEe-CCccccCCCE
Confidence 110 0000000001112345566777777777763 24678889999999999999999998887733 3332 235
Q ss_pred EEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC-------------------CCeEEEEec--cChHHHHHHHH
Q 014603 351 VMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL-------------------KDWLRITFA--VEPSALEDGLG 409 (422)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~-------------------~~~iRis~~--~~~~~l~~~~~ 409 (422)
+++.++.. +..++...+ .++||.+.+|..|.. .+++|++++ +++++++++++
T Consensus 292 ~~~~~~~~------~~~~~~~~l-~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~t~e~i~~~~~ 364 (382)
T 4hvk_A 292 VNVRFSYI------EGESIVLSL-DMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLE 364 (382)
T ss_dssp EEEEETTC------CHHHHHHHH-HHTTCBCBCC--------CCCHHHHHTTCCHHHHHTEEEEECCTTCCHHHHHHHHH
T ss_pred EEEEECCC------CHHHHHHHH-HHCCEEEeeCCccCCCCCcchHHHHHcCCChhhcCCeEEEEcCCCCCHHHHHHHHH
Confidence 56666431 466666665 567999999976643 478999998 67899999999
Q ss_pred HHHHHHHHhcc
Q 014603 410 RMKAFYDRHAK 420 (422)
Q Consensus 410 ~l~~~~~~~~~ 420 (422)
+|+++++++.+
T Consensus 365 ~l~~~~~~~~~ 375 (382)
T 4hvk_A 365 VLPGVIERLRS 375 (382)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999988754
No 101
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=100.00 E-value=9.8e-33 Score=263.67 Aligned_cols=332 Identities=13% Similarity=0.095 Sum_probs=244.1
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCC--C----CCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEe
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSAR--F----NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLT 116 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~--~----~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~ 116 (422)
+|..++||+.+++ .+++.+|.+.+++.+++.+.. . ..|+......+++++++++++ . +..+++
T Consensus 57 ~g~~~ld~~s~~~---l~~~~~p~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g------~--~~~i~~ 125 (409)
T 3kki_A 57 ASPDDIILQSNDY---LALANHPLIKARLAKSLLEEQQSLFMSASFLQNDYDKPMIEKRLAKFTG------F--DECLLS 125 (409)
T ss_dssp CCTTSEECCCSCT---TCCTTCHHHHHHHHHHHHSCCCCCCSBGGGGCSTTTSCHHHHHHHHHHT------C--SEEEEE
T ss_pred CCCceEEeeccCc---cCCcCCHHHHHHHHHHHHHcCCCCCccccccCCcHHHHHHHHHHHHHhC------C--CeEEEe
Confidence 4677899988763 346678999999999987621 1 122333456789999999983 2 345666
Q ss_pred cCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC-CceEEEEeCCCCC
Q 014603 117 LGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE-NTVALVIINPGNP 195 (422)
Q Consensus 117 ~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~i~~p~np 195 (422)
++|++++..++.+++++||.|+++.|+|..+...+...|.+++.++. .|++.|++.+++ +++++++++|+||
T Consensus 126 ~sGt~a~~~~l~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~vi~~~~~np 198 (409)
T 3kki_A 126 QSGWNANVGLLQTICQPNTNVYIDFFAHMSLWEGARYANAQAHPFMH-------NNCDHLRMLIQRHGPGIIVVDSIYST 198 (409)
T ss_dssp SCHHHHHHHHHHHHCCTTCEEEEETTSCHHHHHHHHHTTCEEEEECT-------TCHHHHHHHHHHHCSCEEEEESBCTT
T ss_pred cchHHHHHHHHHHhcCCCCEEEECCCcCHHHHHHHHHcCCeEEEecC-------CCHHHHHHHHHhcCCeEEEECCCCCC
Confidence 77789999999999999999999999999999889999988887653 488999998865 5789999999999
Q ss_pred cccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCC-CCeEEEecCccccCCCCceeEEEEeeCCCC
Q 014603 196 CGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSI-VPVLTLGSISKRWIVPGWRLGWLVTSDPNG 274 (422)
Q Consensus 196 tG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~-~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~ 274 (422)
||.+++ +++|.++|+++|++||+||+|+.+.++..........+.. +..+++.|+||+++++| ||+++++
T Consensus 199 tG~~~~---l~~l~~la~~~~~~li~De~~~~g~~g~~g~~~~~~~~~~~~~di~~~s~sK~~~~~g---g~v~~~~--- 269 (409)
T 3kki_A 199 LGTIAP---LAELVNISKEFGCALLVDESHSLGTHGPNGAGLLAELGLTREVHFMTASLAKTFAYRA---GAIWCNN--- 269 (409)
T ss_dssp TCCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSSC---EEEEESS---
T ss_pred CCCcCC---HHHHHHHHHHcCCEEEEECCccccccCCCCCcchhhcCCCCCCCEEEeecchhhCCCc---eEEEECH---
Confidence 999987 8889999999999999999998744422111111112211 23488999999987665 9998863
Q ss_pred cccchhHHHHHHhhh---hhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEE
Q 014603 275 ILQDSGIVDSIKSFL---NISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFV 351 (422)
Q Consensus 275 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~ 351 (422)
++++.+.... ......++..++++.++++... ..++.+++++++++++.+.|+++ ++. + +..+.++
T Consensus 270 -----~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~--~~~~~~~~~~~~~~~l~~~L~~~-g~~-~--~~~~~~~ 338 (409)
T 3kki_A 270 -----EVNRCVPFISYPAIFSSTLLPYEAAGLETTLEIIE--SADNRRQHLDRMARKLRIGLSQL-GLT-I--RSESQII 338 (409)
T ss_dssp -----SGGGTHHHHCHHHHHSBCCCHHHHHHHHHHHHHHH--HCHHHHHHHHHHHHHHHHHHHTT-TCC-C--CCSSSEE
T ss_pred -----HHHHHHHHhCcCccccCCCcHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHc-CCc-c--CCCCCEE
Confidence 3444444322 2233456677777777776532 22677888999999999999988 666 3 2467788
Q ss_pred EEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC---CCeEEEEec--cChHHHHHHHHHHHHHHHHh
Q 014603 352 MVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL---KDWLRITFA--VEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~---~~~iRis~~--~~~~~l~~~~~~l~~~~~~~ 418 (422)
|+.++... +..++...+++ +||.+.++..+.. .+++|++++ ++++++++++++|+++++..
T Consensus 339 ~~~~~~~~-----~~~~~~~~L~~-~Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~~ 404 (409)
T 3kki_A 339 GLETGDER-----NTEKVRDYLES-NGVFGSVFCRPATSKNKNIIRLSLNSDVNDEQIAKIIEVCSDAVNYG 404 (409)
T ss_dssp EEEEESHH-----HHHHHHHHHHH-TTEECEEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHS
T ss_pred EEEeCCHH-----HHHHHHHHHHH-CCceEeeeCCCCcCCCCcEEEEEccCCCCHHHHHHHHHHHHHHHhcC
Confidence 88876421 24456666655 5999988654422 479999997 68999999999999998763
No 102
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=100.00 E-value=1.8e-33 Score=266.44 Aligned_cols=319 Identities=15% Similarity=0.124 Sum_probs=240.5
Q ss_pred CCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCC--CCEEEecCHHHHHHHHHHHhcCCCCEEE
Q 014603 61 FRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSP--DDVYLTLGCTQAIEVILTVLARPGANIL 138 (422)
Q Consensus 61 ~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~--~~i~~~~g~~~a~~~~~~~l~~~gd~Vl 138 (422)
.++++++.+++.+.+.... .+.......++++++++++ +.++ +++++|+|++++++ ++.+++++||+|+
T Consensus 11 ~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~la~~~------~~~~~~~~v~~~~g~t~al~-~~~~~~~~gd~vi 81 (384)
T 3zrp_A 11 TTIKEDVLVAGLENNVGFT--SKEFVEALAYSLKGLRYVM------GASKNYQPLIIPGGGTSAME-SVTSLLKPNDKIL 81 (384)
T ss_dssp SCCCHHHHHHTTCCSCCTT--SHHHHHHHHHHHHHHHHHH------TCCTTSEEEEEESCHHHHHH-HGGGGCCTTCEEE
T ss_pred CCCCHHHHHHhhccccccc--cHHHHHHHHHHHHHHHHHh------CCCCCCcEEEEcCCcHHHHH-HHHhhcCCCCEEE
Confidence 3677899888877654311 1112334677888888888 3455 78999999999999 9999999999999
Q ss_pred ecCCCccc--hHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC-CceEEEEeCCCCCcccccCHHHHHHHHHHHHHc
Q 014603 139 LPRPGFPY--YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE-NTVALVIINPGNPCGNVYTYQHLQKIAETAKKL 215 (422)
Q Consensus 139 ~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~ 215 (422)
+++++|++ +...++..|.+++.++.+. ++.+|++.+++.+++ +++++++++|+||||.+++ +++|.++|+++
T Consensus 82 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~ 156 (384)
T 3zrp_A 82 VVSNGVFGDRWEQIFKRYPVNVKVLRPSP--GDYVKPGEVEEEVRKSEYKLVALTHVETSTGVREP---VKDVINKIRKY 156 (384)
T ss_dssp EECSSHHHHHHHHHHTTSSCEEEEECCST--TCCCCHHHHHHHHHHSCEEEEEEESEETTTTEECC---HHHHHHHHGGG
T ss_pred EecCCcchHHHHHHHHHcCCcEEEecCCC--CCCCCHHHHHHHHHhCCCcEEEEeCCCCCCceECc---HHHHHHHHHhc
Confidence 99999966 5566678899999998764 446899999999877 7899999999999999986 77889999999
Q ss_pred CcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHH----------
Q 014603 216 GIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSI---------- 285 (422)
Q Consensus 216 ~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~---------- 285 (422)
|+++|+|++|+... ....+...+ ..+++.|+||++++ +.++|+++++ +++++++
T Consensus 157 ~~~li~D~a~~~~~----~~~~~~~~~---~d~~~~s~~K~~~~-~~g~g~~~~~--------~~~~~~~~~~~~~~~~~ 220 (384)
T 3zrp_A 157 VELIVVDGVSSVGA----EEVKAEEWN---VDVYLTASQKALGS-AAGLGLLLLS--------PKALSILDSQNSIAGYY 220 (384)
T ss_dssp EEEEEEECTTTTTT----SCCCTTTTT---CSEEEEETTSTTCC-CSSEEEEEEC--------HHHHHHHHHCCCSCCST
T ss_pred CCEEEEECcccccC----ccccccccC---CCEEEecCcccccC-CCceEEEEEC--------HHHHHHhcCCCCCCccc
Confidence 99999999987522 122222222 34889999998642 2348999986 4565555
Q ss_pred ---Hhhhh-----------hccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC----C
Q 014603 286 ---KSFLN-----------ISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPE----G 347 (422)
Q Consensus 286 ---~~~~~-----------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~----~ 347 (422)
..... ..++++...+.++..+++...+..+++..++++++++.+.+.|+++ ++.+. .+. .
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~ 298 (384)
T 3zrp_A 221 LDLRNWLPVMRGAEEGKAAYFATPPVHVILQLAEAFRLIEKEGIENRIKRHTMVASAIRAGLEAL-GLEIV-ARRPESYS 298 (384)
T ss_dssp TCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBS-CSSGGGBC
T ss_pred ccHHHHHHHHHhhcccCCCcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHC-CCeEc-cCcccccC
Confidence 11110 0135666677777777765444557889999999999999999998 77733 444 4
Q ss_pred ceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHHHHHHHHHhc
Q 014603 348 SMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGRMKAFYDRHA 419 (422)
Q Consensus 348 g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~l~~~~~~~~ 419 (422)
+.++++.++.. +..++...+. ++||.+.+|..+.. +++|++++ ++++++++++++|+++++++.
T Consensus 299 ~~~~~~~~~~~------~~~~~~~~l~-~~gi~v~~g~~~~~-~~iRi~~~~~~~~e~i~~~~~~l~~~l~~~~ 364 (384)
T 3zrp_A 299 NTVTGVILKVA------DPQKVLAGTV-NEGVEFAPGVHPAF-KYFRIGHMGWVTPNDAIIAISVIERTLRKLG 364 (384)
T ss_dssp SSEEEEECSSS------CHHHHHHHHH-TTTCCCEECCCTTC-CEEEEECCSSCCHHHHHHHHHHHHHHHHHHT
T ss_pred ccEEEEECCCC------CHHHHHHHHH-HCCEEEecCCCCCc-CEEEEeccccCCHHHHHHHHHHHHHHHHHcC
Confidence 66778888642 5677777765 45999999875443 89999987 789999999999999998764
No 103
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=100.00 E-value=8.5e-33 Score=262.99 Aligned_cols=315 Identities=16% Similarity=0.141 Sum_probs=229.2
Q ss_pred eeecCCCCCCCCCCCCcHHHHHHHHHHhh----CCCCCCCCCCCCCH---HHHHHHHHHHhhcCCCCCCCCCEEEecCHH
Q 014603 48 IPLGHGDPSAFPSFRTASVAVDAIVHSVR----SARFNCYSSTVGIL---PARRAIADYLNRDLPYKLSPDDVYLTLGCT 120 (422)
Q Consensus 48 i~l~~g~~~~~~~~~~~~~v~~a~~~~~~----~~~~~~y~~~~g~~---~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~ 120 (422)
.+++.++|. ++.++.+.+++.+.+. ......|++ .+.+ +++++++++++ . +++++++|++
T Consensus 21 ~~~~~~~p~----~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-~~~~~~~~l~~~ia~~~g------~--~~~i~~~~g~ 87 (404)
T 1e5e_A 21 QFGAAIPPI----YQTSTFVFDNCQQGGNRFAGQESGYIYTR-LGNPTVSNLEGKIAFLEK------T--EACVATSSGM 87 (404)
T ss_dssp TTCCSSCCC----CCCSBCCCSSHHHHHHHHTTSSCSCCBTT-TCCHHHHHHHHHHHHHHT------C--SEEEEESSHH
T ss_pred CCCCcCCCC----cCCCccccCCHHHHHHhhcCCcCCccccC-CcChHHHHHHHHHHHHhC------C--CcEEEeCChH
Confidence 467788866 4555555555444432 223346776 4556 89999999983 2 3788888889
Q ss_pred HHHHHHHHHhcCCCCEEEecCCCccchHH----HHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCc
Q 014603 121 QAIEVILTVLARPGANILLPRPGFPYYEA----RATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPC 196 (422)
Q Consensus 121 ~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~npt 196 (422)
+|+..++.+++++||+|+++.|+|+++.. .++..|.+++.++.+ |++.|++.++++++++++++|+|||
T Consensus 88 ~ai~~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~i~~~t~~v~l~~p~Npt 160 (404)
T 1e5e_A 88 GAIAATVLTILKAGDHLISDECLYGCTHALFEHALTKFGIQVDFINTA-------IPGEVKKHMKPNTKIVYFETPANPT 160 (404)
T ss_dssp HHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT-------STTHHHHHCCTTEEEEEEESSCTTT
T ss_pred HHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCC-------CHHHHHHhcCCCCcEEEEECCCCCC
Confidence 99999999999999999999999998877 677889999888753 7789999998899999999999999
Q ss_pred ccccCHHHHHHHHHHHHH-cCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCcee-EEEEeeCCCC
Q 014603 197 GNVYTYQHLQKIAETAKK-LGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRL-GWLVTSDPNG 274 (422)
Q Consensus 197 G~~~~~~~l~~i~~~~~~-~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~-G~~~~~~~~~ 274 (422)
|.+++ +++|+++|++ +|+++|+|++|+.+.+. .++ .+ +..+++.|+||+|+++|+|+ ||++++
T Consensus 161 G~v~~---l~~i~~la~~~~~~~li~De~~~~~~~~----~~~-~~---~~di~~~S~sK~~~~~g~ri~G~~~~~---- 225 (404)
T 1e5e_A 161 LKIID---MERVCKDAHSQEGVLVIADNTFCSPMIT----NPV-DF---GVDVVVHSATKYINGHTDVVAGLICGK---- 225 (404)
T ss_dssp CCCCC---HHHHHHHHHTSTTCEEEEECTTTCTTTC----CGG-GG---TCSEEEEETTTTTTCSSCCCCEEEEEC----
T ss_pred CcccC---HHHHHHHHHhhcCCEEEEECCCchhhhC----Ccc-cc---CCEEEEEcCccccCCCCCCeEEEEEEC----
Confidence 99985 8889999999 99999999999976542 122 22 34599999999999999998 999986
Q ss_pred cccchhHHH-HHHhhhhh--ccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCC-------------
Q 014603 275 ILQDSGIVD-SIKSFLNI--SSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPC------------- 338 (422)
Q Consensus 275 ~~~~~~~~~-~~~~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~------------- 338 (422)
+++++ ++...... ....+++.++++..+++. +..+.++..++.+.+.+.|++.+.
T Consensus 226 ----~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p 296 (404)
T 1e5e_A 226 ----ADLLQQIRMVGIKDITGSVISPHDAWLITRGLST-----LNIRMKAESENAMKVAEYLKSHPAVEKVYYPGFEDHE 296 (404)
T ss_dssp ----HHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHTT-----HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTCSSST
T ss_pred ----HHHHHHHHHHHHHhCCCCCCCHHHHHHHHHhHhH-----HHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCc
Confidence 35666 67665543 345778888888888875 333444455556666666665432
Q ss_pred -CCCCCCC----CCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCC-------------------------
Q 014603 339 -ITCPKKP----EGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVG------------------------- 388 (422)
Q Consensus 339 -~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~------------------------- 388 (422)
+. +..+ .++++.| .++. ..+....++++.|| +.+|..|+
T Consensus 297 ~~~-~~~~~~~~~g~~~~~-~~~~--------~~~~~~~~l~~~~i-~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~ 365 (404)
T 1e5e_A 297 GHD-IAKKQMRMYGSMITF-ILKS--------GFEGAKKLLDNLKL-ITLAVSLGGCESLIQHPASMTHAVVPKEEREAA 365 (404)
T ss_dssp THH-HHHHHCSSCCSEEEE-EETT--------HHHHHHHHHHTCSS-SEESSCCCSSSCEEECGGGTTTTTSCHHHHHHT
T ss_pred cHH-HHHhhCCCCceEEEE-EeCC--------CHHHHHHHHHhCCC-ceeccCCCCcceeeecccccccccCCHHHHHhc
Confidence 11 0011 1444444 7752 22345567788898 44554333
Q ss_pred -C-CCeEEEEeccChHHHHHHHHHHHHHHHHhc
Q 014603 389 -L-KDWLRITFAVEPSALEDGLGRMKAFYDRHA 419 (422)
Q Consensus 389 -~-~~~iRis~~~~~~~l~~~~~~l~~~~~~~~ 419 (422)
. ++++|||++. +++++++++|+++++...
T Consensus 366 g~~~~~iRis~g~--e~~~~li~~l~~al~~~~ 396 (404)
T 1e5e_A 366 GITDGMIRLSVGI--EDADELIADFKQGLDALL 396 (404)
T ss_dssp TCCTTEEEEECCS--SCHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEeCC--CCHHHHHHHHHHHHHHHH
Confidence 1 5799999998 889999999998887653
No 104
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=100.00 E-value=1.7e-33 Score=263.41 Aligned_cols=318 Identities=16% Similarity=0.126 Sum_probs=236.5
Q ss_pred CCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEec
Q 014603 61 FRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLP 140 (422)
Q Consensus 61 ~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~ 140 (422)
.++++.+++++.+.+... ..|....+..++|+++++++ +++++++++|+|++++++.++.+++++||+|+++
T Consensus 10 ~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~l~~~la~~~------g~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~ 81 (352)
T 1iug_A 10 VRLHPKALEALARPQLHH--RTEAAREVFLKARGLLREAF------RTEGEVLILTGSGTLAMEALVKNLFAPGERVLVP 81 (352)
T ss_dssp CCCCHHHHHHHHSCCCCT--TSHHHHHHHHHHHHHHHHHH------TCSSEEEEEESCHHHHHHHHHHHHCCTTCEEEEE
T ss_pred CCCCHHHHHHhccCCCCc--cCHHHHHHHHHHHHHHHHHh------CCCCceEEEcCchHHHHHHHHHhccCCCCeEEEE
Confidence 367799999998876431 11222245688999999998 4566899999999999999999999999999999
Q ss_pred CCCccchH--HHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHc--C
Q 014603 141 RPGFPYYE--ARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKL--G 216 (422)
Q Consensus 141 ~~~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~--~ 216 (422)
.|+|+++. ..++..|.+++.++.++ ++.+|++.+++ ++++++++++|+||||.+++ +++|.++|+++ |
T Consensus 82 ~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~---~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~ 153 (352)
T 1iug_A 82 VYGKFSERFYEIALEAGLVVERLDYPY--GDTPRPEDVAK---EGYAGLLLVHSETSTGALAD---LPALARAFKEKNPE 153 (352)
T ss_dssp ECSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCTTTSCC---SSCSEEEEESEETTTTEECC---HHHHHHHHHHHCTT
T ss_pred eCCchhHHHHHHHHHcCCceEEEeCCC--CCCCCHHHHhc---cCCcEEEEEEecCCcceecC---HHHHHHHHHhhCCC
Confidence 99998864 44556799999998754 34578888876 57889999999999999976 67889999999 9
Q ss_pred cEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHH---------HH-
Q 014603 217 IMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDS---------IK- 286 (422)
Q Consensus 217 ~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~---------~~- 286 (422)
+++|+|++|+. +.....+...+ ..++++|+||+++++ .++|++++++ +++++ +.
T Consensus 154 ~~li~D~a~~~----~~~~~~~~~~~---~d~~~~s~~K~~~~~-~g~G~~~~~~--------~~~~~~~~~~~~~~~~~ 217 (352)
T 1iug_A 154 GLVGADMVTSL----LVGEVALEAMG---VDAAASGSQKGLMCP-PGLGFVALSP--------RALERLKPRGYYLDLAR 217 (352)
T ss_dssp CEEEEECTTTB----TTBCCCSGGGT---CSEEEEESSSTTCCC-SCEEEEEECH--------HHHHTCCCCSSTTCHHH
T ss_pred CEEEEECCccc----cCcceeccccC---eeEEEecCcccccCC-CceeEEEECH--------HHHHHhhCCCceeeHHH
Confidence 99999999974 22112222222 248899999954332 2379999863 34332 11
Q ss_pred ---hh--hhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC-CceEEEEecCcccc
Q 014603 287 ---SF--LNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPE-GSMFVMVKLNYSLL 360 (422)
Q Consensus 287 ---~~--~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~g~~~~~~~~~~~~ 360 (422)
.. ....++++...+.++.++++...+. +++.+++++++++.+.+.|+++ ++.+. .|. .+.++|+.++..
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~-~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~~~-- 292 (352)
T 1iug_A 218 ELKAQKEGESAWTPAINLVLAVAAVLEEVLPR-LEEHLALKAWQNALLYGVGEEG-GLRPV-PKRFSPAVAAFYLPEG-- 292 (352)
T ss_dssp HHHHHTTTCCSSCCCHHHHHHHHHHHHHHGGG-HHHHHHHHHHHHHHHHHHHHHT-TCEES-CSSBCTTCEEEECCTT--
T ss_pred HHhhcccCCCCCCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHC-CCccc-ccccCCeEEEEEcCCC--
Confidence 11 1223466777777777777653323 7788899999999999999988 77633 453 567888888631
Q ss_pred cCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHHHHHHHHHhc
Q 014603 361 EGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGRMKAFYDRHA 419 (422)
Q Consensus 361 ~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~l~~~~~~~~ 419 (422)
.+..++...+. ++||.+.+|..+...+++|++++ ++++++++++++|+++++++.
T Consensus 293 ---~~~~~~~~~l~-~~gi~v~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 349 (352)
T 1iug_A 293 ---VPYARVKEAFA-QRGAVIAGGQGPLKGKVFRLSLMGAYDRYEALGVAGMFREVLEEIL 349 (352)
T ss_dssp ---CCHHHHHHHHH-TTTEECEECCGGGTTTEEEECCCSSCCHHHHHHHHHHHHHHHHHHC
T ss_pred ---CCHHHHHHHHH-HCCEEEEeCCCccCCCEEEEEccccCCHHHHHHHHHHHHHHHHHhc
Confidence 15667777765 55999999885545689999998 578999999999999988763
No 105
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=100.00 E-value=3e-34 Score=275.67 Aligned_cols=348 Identities=15% Similarity=0.125 Sum_probs=240.1
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCC--CCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARF--NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT 120 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~ 120 (422)
++..++||+.+......++ ++|.+.+++.+++..... ..|.+..+..++++++++++. + . .+++|++|+|++
T Consensus 39 ~g~~~id~~~~~~~~~lg~-~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~---~-~-~~~~v~~~~g~~ 112 (426)
T 1sff_A 39 EGREYLDFAGGIAVLNTGH-LHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEIMNQKVP---G-D-FAKKTLLVTTGS 112 (426)
T ss_dssp TCCEEEESSHHHHTCTTCB-TCHHHHHHHHHHTTTCSCCCTTTEECHHHHHHHHHHHHHSS---C-S-SCEEEEEESSHH
T ss_pred CCCEEEEcccChhhcccCC-CCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCC---c-c-cccEEEEeCchH
Confidence 5778899988764322233 678999999999865322 135556778899999999983 1 1 348999999999
Q ss_pred HHHHHHHH---HhcCCCCEEEecCCCccchHH-HHhhCCCe-------------EEEeeccC---CCCcccCHHHHHHhh
Q 014603 121 QAIEVILT---VLARPGANILLPRPGFPYYEA-RATHSHLE-------------VRHFDLLP---AKGWEVDLDAVEALA 180 (422)
Q Consensus 121 ~a~~~~~~---~l~~~gd~Vl~~~~~~~~~~~-~~~~~g~~-------------~~~~~~~~---~~~~~~d~~~l~~~~ 180 (422)
+|++.+++ .++++| +|++++|+|+++.. .....|.+ ++.++... ..++.+|++.|++.+
T Consensus 113 ~a~~~~~~~a~~~~~~~-~vi~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l 191 (426)
T 1sff_A 113 EAVENAVKIARAATKRS-GTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIF 191 (426)
T ss_dssp HHHHHHHHHHHHHHTCC-EEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCC-eEEEECCCcCCCchHhhhhcCCccccccccCCCCCCcEEeCCCccccccchHHHHHHHHHHH
Confidence 99999988 677776 89999999987643 44444432 55566532 113446899999887
Q ss_pred c-----CCceEEEEe-CCCCCcc-cccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecC
Q 014603 181 D-----ENTVALVII-NPGNPCG-NVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSI 253 (422)
Q Consensus 181 ~-----~~~~~i~i~-~p~nptG-~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~ 253 (422)
+ +++++++++ +++| || .++|.+++++|.++|++||++||+||+|+++.+.|... .+...+.. +.+.||
T Consensus 192 ~~~~~~~~~~~v~~~p~~~n-tG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~-~~~~~~~~---~di~s~ 266 (426)
T 1sff_A 192 KNDAAPEDIAAIVIEPVQGE-GGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLF-AMEQMGVA---PDLTTF 266 (426)
T ss_dssp HHTCCGGGEEEEEECSBCTT-TTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGTTSC---CSEEEE
T ss_pred HhccCCCceEEEEEecccCC-CCcccCCHHHHHHHHHHHHHcCCEEEEechhhccCcccchh-hhhhcCCC---CCEEEE
Confidence 5 344555442 3367 99 78899999999999999999999999999876655321 22222221 224489
Q ss_pred ccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhh-hhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHH
Q 014603 254 SKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDR 332 (422)
Q Consensus 254 sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 332 (422)
||++++ |+|+||++++ +++++.+.... ..+.+++++.+.++.++|+...+ .+..++++++++.+.+.
T Consensus 267 sK~~~~-GlriG~~~~~--------~~~~~~l~~~~~~~~~~~~~~~~~a~~aal~~~~~---~~~~~~~~~~~~~l~~~ 334 (426)
T 1sff_A 267 AKSIAG-GFPLAGVTGR--------AEVMDAVAPGGLGGTYAGNPIACVAALEVLKVFEQ---ENLLQKANDLGQKLKDG 334 (426)
T ss_dssp CGGGGT-SSCCEEEEEE--------HHHHTTSCTTSBCCSSSSCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHH
T ss_pred cccccC-CCceEEEEEc--------HHHHhhhccCCcCcCCCCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHH
Confidence 999876 9999999997 35666554322 23346788899998888875322 23455666667777766
Q ss_pred hhc----CCCCCCCCCCCCceEEEEecCcccc---cCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHH
Q 014603 333 LKE----IPCITCPKKPEGSMFVMVKLNYSLL---EGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSA 403 (422)
Q Consensus 333 L~~----~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~ 403 (422)
|++ ++.+. ...+. |+++|+.++.... +...+..++...+. ++||.+.||..+ .+++|++++ +++++
T Consensus 335 l~~~~~~~~~~~-~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~gi~v~~~~~~--~~~iRi~~~~~~~~~~ 409 (426)
T 1sff_A 335 LLAIAEKHPEIG-DVRGL-GAMIAIELFEDGDHNKPDAKLTAEIVARAR-DKGLILLSCGPY--YNVLRILVPLTIEDAQ 409 (426)
T ss_dssp HHHHHHTCTTEE-EEEEE-TTEEEEEEBGGGCTTSBCHHHHHHHHHHHH-HTTEECEEESTT--SCEEEECCCTTCCHHH
T ss_pred HHHHHHhCCCeE-EEEEE-EEEEEEEEecCccccCCChHHHHHHHHHHH-HCCcEEecCCCC--CCEEEEECCccCCHHH
Confidence 665 33222 11234 7889998842100 00012455666664 569999998754 689999986 78999
Q ss_pred HHHHHHHHHHHHHHhc
Q 014603 404 LEDGLGRMKAFYDRHA 419 (422)
Q Consensus 404 l~~~~~~l~~~~~~~~ 419 (422)
+++++++|++++++++
T Consensus 410 i~~~~~~l~~~l~~~~ 425 (426)
T 1sff_A 410 IRQGLEIISQCFDEAK 425 (426)
T ss_dssp HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999998763
No 106
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=100.00 E-value=5e-33 Score=265.88 Aligned_cols=332 Identities=12% Similarity=0.039 Sum_probs=247.3
Q ss_pred CCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCC--CCCCHHHHHHHHHHHhhcCCCCCCCCC-EEEecCHH
Q 014603 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSS--TVGILPARRAIADYLNRDLPYKLSPDD-VYLTLGCT 120 (422)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~--~~g~~~lr~~ia~~l~~~~~~~~~~~~-i~~~~g~~ 120 (422)
.+....|+-|. .++++.+.+++.+.... .|.+ .....+++++++++++ .+.++ +++++|++
T Consensus 11 ~~~~~~~~pgp------~~~~~~v~~a~~~~~~~----~~~~~~~~~~~~~~~~la~~~~------~~~~~~v~~~~sgt 74 (411)
T 3nnk_A 11 PPSRLLMGPGP------INADPRVLRAMSSQLIG----QYDPAMTHYMNEVMALYRGVFR------TENRWTMLVDGTSR 74 (411)
T ss_dssp CCCCEEESSSC------CCCCHHHHHHHTSCCCC----TTCHHHHHHHHHHHHHHHHHHT------CCCSEEEEEESCHH
T ss_pred CccceeecCCC------CCCCHHHHHHhhccccc----cccHHHHHHHHHHHHHHHHHhC------CCCCcEEEECCCcH
Confidence 34445554443 36778998888765422 2222 1234677778888773 34444 78899999
Q ss_pred HHHHHHHHHhcCCCCEEEecCCCccc--hHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC-CceEEEEeCCCCCcc
Q 014603 121 QAIEVILTVLARPGANILLPRPGFPY--YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE-NTVALVIINPGNPCG 197 (422)
Q Consensus 121 ~a~~~~~~~l~~~gd~Vl~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~i~~p~nptG 197 (422)
++++.++.+++++||+|+++.|+|++ +...++..|.+++.++.+ .++.+|++.|++.+++ +++++++++|+||||
T Consensus 75 ~al~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG 152 (411)
T 3nnk_A 75 AGIEAILVSAIRPGDKVLVPVFGRFGHLLCEIARRCRAEVHTIEVP--WGEVFTPDQVEDAVKRIRPRLLLTVQGDTSTT 152 (411)
T ss_dssp HHHHHHHHHHCCTTCEEEEEECSHHHHHHHHHHHHTTCEEEEEECC--TTCCCCHHHHHHHHHHHCCSEEEEESEETTTT
T ss_pred HHHHHHHHHhcCCCCEEEEecCCchHHHHHHHHHHcCCeEEEEecC--CCCCCCHHHHHHHHhhCCCeEEEEeCCCCCcc
Confidence 99999999999999999999999987 888888899999999874 3456899999999876 899999999999999
Q ss_pred cccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCccc
Q 014603 198 NVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQ 277 (422)
Q Consensus 198 ~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~ 277 (422)
.+++ +++|.++|+++|+++|+|++++.. .....+...+ ..+++.|++|+++ .+.++|+++++
T Consensus 153 ~~~~---l~~i~~l~~~~~~~li~Dea~~~~----~~~~~~~~~~---~d~~~~s~~K~l~-~~~g~g~~~~~------- 214 (411)
T 3nnk_A 153 MLQP---LAELGEICRRYDALFYTDATASLG----GNPLETDVWG---LDAVSAGMQKCLG-GPSGTSPITLS------- 214 (411)
T ss_dssp EECC---CTTHHHHHHHHTCEEEEECTTTBT----TBCCCTTTTT---CSEEECCSTTTTC-CCSSEEEEEEC-------
T ss_pred eecc---HHHHHHHHHHcCCEEEEECCcccC----CcccchhccC---CcEEEecCccccC-CCCceEEEEEC-------
Confidence 9976 778899999999999999998752 2122222222 2488999999742 23358999986
Q ss_pred chhHHHHHHhhh-------------------------------------hhccCcchHHHHHHHHHHhhchHHHHHHHHH
Q 014603 278 DSGIVDSIKSFL-------------------------------------NISSDPATFIQGAVPQILEKTEEEFFSKITD 320 (422)
Q Consensus 278 ~~~~~~~~~~~~-------------------------------------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 320 (422)
+++.+++.... ...++++...+.++..+++...+.++++..+
T Consensus 215 -~~~~~~~~~~~~~~~~~~g~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~ 293 (411)
T 3nnk_A 215 -ARMEEAIRRRKCVEEGIRTDAHRDGDEEMIYSNYFDLGMVMDYWGPERLNHHTEATTALFGARECARLILQEGLDYGIA 293 (411)
T ss_dssp -HHHHHHHHTTCCCCGGGCCTTCCCCSSCCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred -HHHHHHHhhcccccccccccccccccCCCCcccccchHHHHhhhccccCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 46666665432 1123556777777777777544444788899
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCCC---ceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEe
Q 014603 321 ILRETADICCDRLKEIPCITCPKKPEG---SMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITF 397 (422)
Q Consensus 321 ~~~~~~~~l~~~L~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~ 397 (422)
+++++++.+.+.|+++ ++.+. .+.+ +.++++.++.. .+..++...+++++||.+.+|.....++++||++
T Consensus 294 ~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~~~~~-----~~~~~l~~~l~~~~gi~v~~g~~~~~~~~iRi~~ 366 (411)
T 3nnk_A 294 RHKLHGDALVKGIQAM-GLETF-GDLKHKMNNVLGVVIPQG-----INGDQARKLMLEDFGIEIGTSFGPLHGKVWRIGT 366 (411)
T ss_dssp HHHHHHHHHHHHHHHT-TCCBC-SCGGGBCSSEEEEECCTT-----CCHHHHHHHHHHHHSEEEEECCGGGTTTEEEEEC
T ss_pred HHHHHHHHHHHHHHHc-CCEeC-CCcccccccEEEEECCCC-----CCHHHHHHHHHHhcCeEEeCccCCCCCCEEEEeC
Confidence 9999999999999987 77633 3432 56778887632 2567777777676799999986555578999998
Q ss_pred -c--cChHHHHHHHHHHHHHHHHhc
Q 014603 398 -A--VEPSALEDGLGRMKAFYDRHA 419 (422)
Q Consensus 398 -~--~~~~~l~~~~~~l~~~~~~~~ 419 (422)
+ ++++++++++++|+++++++.
T Consensus 367 ~~~~~~~~~i~~~~~~l~~~l~~~~ 391 (411)
T 3nnk_A 367 MGYNARKDCVMTTLSALEAVLNYLK 391 (411)
T ss_dssp CGGGCSHHHHHHHHHHHHHHHHHTT
T ss_pred ccCcCCHHHHHHHHHHHHHHHHHcC
Confidence 5 478999999999999998754
No 107
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=100.00 E-value=4.1e-33 Score=264.74 Aligned_cols=322 Identities=15% Similarity=0.076 Sum_probs=242.9
Q ss_pred CCCcHHHHHHHHHHhhCCCCCCCCC--CCCCHHHHHHHHHHHhhcCCCCCCC-CCEEEecCHHHHHHHHHHHhcCCCCEE
Q 014603 61 FRTASVAVDAIVHSVRSARFNCYSS--TVGILPARRAIADYLNRDLPYKLSP-DDVYLTLGCTQAIEVILTVLARPGANI 137 (422)
Q Consensus 61 ~~~~~~v~~a~~~~~~~~~~~~y~~--~~g~~~lr~~ia~~l~~~~~~~~~~-~~i~~~~g~~~a~~~~~~~l~~~gd~V 137 (422)
.++++.+.+++.++... .+.+ .....+++++++++++ .+. ++|++|+|+++++..++++++++||+|
T Consensus 32 ~~~~~~v~~a~~~~~~~----~~~~~~~~~~~~l~~~la~~~~------~~~~~~v~~~~gg~~al~~~~~~~~~~gd~v 101 (393)
T 3kgw_A 32 SNLAPRVLAAGSLRMIG----HMQKEMLQIMEEIKQGIQYVFQ------TRNPLTLVVSGSGHCAMETALFNLLEPGDSF 101 (393)
T ss_dssp CCCCHHHHHHTTCCCCC----TTSHHHHHHHHHHHHHHHHHHT------CCCSEEEEESCCTTTHHHHHHHHHCCTTCEE
T ss_pred CCCCHHHHHHhcccccC----cccHHHHHHHHHHHHHHHHHhC------CCCCcEEEEeCCcHHHHHHHHHhcCCCCCEE
Confidence 36778998888765422 1221 2335677888888773 333 369999999999999999999999999
Q ss_pred EecCCCccc--hHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC-CceEEEEeCCCCCcccccCHHHHHHHHHHHHH
Q 014603 138 LLPRPGFPY--YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE-NTVALVIINPGNPCGNVYTYQHLQKIAETAKK 214 (422)
Q Consensus 138 l~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~ 214 (422)
+++.++|++ +...+...|.+++.++.+. ++.+|++.|++.+++ +++++++++|+||||.+++ +++|.++|++
T Consensus 102 l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~ 176 (393)
T 3kgw_A 102 LTGTNGIWGMRAAEIADRIGARVHQMIKKP--GEHYTLQEVEEGLAQHKPVLLFLVHGESSTGVVQP---LDGFGELCHR 176 (393)
T ss_dssp EEEESSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHH
T ss_pred EEEeCCchhHHHHHHHHHcCCceEEEeCCC--CCCCCHHHHHHHHhhCCCcEEEEeccCCcchhhcc---HHHHHHHHHH
Confidence 999988863 3667778899999998754 346899999999887 8999999999999999986 7788999999
Q ss_pred cCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCcccc-CCCCceeEEEEeeCCCCcccchhHHHHHHhhhh---
Q 014603 215 LGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRW-IVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN--- 290 (422)
Q Consensus 215 ~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~-~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~--- 290 (422)
+|+++|+|++|+.. .....+...+ ..+++.|+||++ +++| +|+++++ +++++.+.....
T Consensus 177 ~~~~li~De~~~~g----~~~~~~~~~~---~d~~~~s~sK~~~~~~g--~g~~~~~--------~~~~~~~~~~~~~~~ 239 (393)
T 3kgw_A 177 YQCLLLVDSVASLG----GVPIYMDQQG---IDIMYSSSQKVLNAPPG--ISLISFN--------DKAKYKVYSRKTKPV 239 (393)
T ss_dssp TTCEEEEECTTTTT----TSCCCTTTTT---CCEEEEESSSTTCCCSS--CEEEEEC--------HHHHHHHHTCSSCCS
T ss_pred cCCEEEEECCcccc----CcccchhhcC---CCEEEecCcccccCCCc--eeEEEEC--------HHHHHHHhccCCCCC
Confidence 99999999998742 1111222222 248888999975 3444 8999986 467777654221
Q ss_pred ---------------------hccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC---
Q 014603 291 ---------------------ISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPE--- 346 (422)
Q Consensus 291 ---------------------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~--- 346 (422)
..++++...+.++.++++...+.++++..++++++++.+.+.|+++ ++.+. .+.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~ 317 (393)
T 3kgw_A 240 SFYTDITYLAKLWGCEGETRVIHHTTPVTSLYCLRESLALIAEQGLENCWRRHREATAHLHKHLQEM-GLKFF-VKDPEI 317 (393)
T ss_dssp CSTTCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBS-SSSGGG
T ss_pred ceeecHHHHHHhhhhccccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCeec-cCChhh
Confidence 1235677777777777775445567889999999999999999998 77633 232
Q ss_pred -CceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEe-c--cChHHHHHHHHHHHHHHHHhccc
Q 014603 347 -GSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITF-A--VEPSALEDGLGRMKAFYDRHAKK 421 (422)
Q Consensus 347 -~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~-~--~~~~~l~~~~~~l~~~~~~~~~~ 421 (422)
.+.+.++.++.. .+..++...+++++||.+.+|..+..++++|+++ + ++++++++++++|+++++++.++
T Consensus 318 ~~~~~~~~~~~~~-----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~~~~ 391 (393)
T 3kgw_A 318 RLPTITTVTVPAG-----YNWRDIVSYVLDHFSIEISGGLGPTEERVLRIGLLGYNATTENVDRVAEALREALQHCPKN 391 (393)
T ss_dssp BCSSEEEEECCTT-----BCHHHHHHHHHHHHCEECBCCCGGGTTTEEEEECCGGGCCHHHHHHHHHHHHHHHHHSCBC
T ss_pred cCCeEEEEeCCCC-----CCHHHHHHHHHHhCCEEEeCCcccCCCCEEEEEecccCCCHHHHHHHHHHHHHHHHhhhhc
Confidence 245667777532 1567777777666699999998776788999998 6 48999999999999999988664
No 108
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.3e-33 Score=266.73 Aligned_cols=327 Identities=12% Similarity=0.106 Sum_probs=242.1
Q ss_pred CceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCC---CCCC----CCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecC
Q 014603 46 PLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARF---NCYS----STVGILPARRAIADYLNRDLPYKLSPDDVYLTLG 118 (422)
Q Consensus 46 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~---~~y~----~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g 118 (422)
+.++|+.+.+. ++++.+.+++.+.+..... ..|. ......++|+++++++ ++++++|++|+|
T Consensus 26 ~~~~ld~~~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~v~~~~g 94 (406)
T 3cai_A 26 GWVHFDAPAGM-----LIPDSVATTVSTAFRRSGASTVGAHPSARRSAAVLDAAREAVADLV------NADPGGVVLGAD 94 (406)
T ss_dssp SCEECBGGGCC-----CCCHHHHHHHHHHHHHCCSSSCSSSHHHHHHHHHHHHHHHHHHHHH------TCCGGGEEEESC
T ss_pred CeEEEeCCCcC-----CCCHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCC
Confidence 47888887744 5678999999998864211 1232 1245688999999998 456789999999
Q ss_pred HHHHHHHHHHHh---cCCCCEEEecCCCccchHHHHhh----CCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeC
Q 014603 119 CTQAIEVILTVL---ARPGANILLPRPGFPYYEARATH----SHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIIN 191 (422)
Q Consensus 119 ~~~a~~~~~~~l---~~~gd~Vl~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~ 191 (422)
+++++++++.++ +++||+|+++.|+|+++...+.. .|.+++.+++++ .++.+|++.|++.++++++++++++
T Consensus 95 ~t~al~~~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~v~~v~~~~-~~~~~d~~~l~~~l~~~~~~v~~~~ 173 (406)
T 3cai_A 95 RAVLLSLLAEASSSRAGLGYEVIVSRLDDEANIAPWLRAAHRYGAKVKWAEVDI-ETGELPTWQWESLISKSTRLVAVNS 173 (406)
T ss_dssp HHHHHHHHHHHTGGGGBTTCEEEEETTSCGGGTHHHHHHHHHHBCEEEEECCCT-TTCCCCGGGHHHHCCTTEEEEEEES
T ss_pred hHHHHHHHHHHHhhccCCCCEEEEcCCccHHHHHHHHHHHHhcCCeEEEEecCc-ccCCcCHHHHHHHhCCCceEEEEeC
Confidence 999999999987 78999999999999876544433 688999998763 3456899999999988899999999
Q ss_pred CCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeE-EEEee
Q 014603 192 PGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLG-WLVTS 270 (422)
Q Consensus 192 p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G-~~~~~ 270 (422)
|+||||.+++ +++|.++|+++|+++|+|++|+. |....++..++ ..+++.|+||+++ ++ +| +++++
T Consensus 174 ~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~----g~~~~~~~~~~---~d~~~~s~~K~~g-~~--~G~~~~~~ 240 (406)
T 3cai_A 174 ASGTLGGVTD---LRAMTKLVHDVGALVVVDHSAAA----PYRLLDIRETD---ADVVTVNAHAWGG-PP--IGAMVFRD 240 (406)
T ss_dssp BCTTTCBBCC---CHHHHHHHHHTTCEEEEECTTTT----TTCCCCHHHHC---CSEEEEEGGGGTS-CS--CEEEEESC
T ss_pred CcCCccccCC---HHHHHHHHHHcCCEEEEEccccc----CCCCCCchhcC---CCEEEeehhhhcC-CC--cCeEEEEe
Confidence 9999999976 67888999999999999999974 22222233333 3488999999864 44 89 99885
Q ss_pred CCCCcccchhHHHHHHhhhh----------hccCcchHHHHHHHHHHhhchH--------------HHHHHHHHHHHHHH
Q 014603 271 DPNGILQDSGIVDSIKSFLN----------ISSDPATFIQGAVPQILEKTEE--------------EFFSKITDILRETA 326 (422)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~a~~~~l~~~~~--------------~~~~~~~~~~~~~~ 326 (422)
+++.+++..... ..++++...+.++.++++...+ .++++..+++++++
T Consensus 241 --------~~~~~~l~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (406)
T 3cai_A 241 --------PSVMNSFGSVSTNPYATGPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRERLAVSMQSADAYLNRVF 312 (406)
T ss_dssp --------HHHHHTSCCCCSCTTCCGGGGGCCSCCCHHHHHHHHHHHHHHHTSSTTCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred --------hHHHhhcCCcccCCCCCccccccCCCccHHHHHHHHHHHHHHHHhccccccchhhhhhhhHHHHHHHHHHHH
Confidence 356655544321 1345566666666666654221 15788889999999
Q ss_pred HHHHHHhhcCCCCCCCCCCC--CceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCC------CCCC---CCeEEE
Q 014603 327 DICCDRLKEIPCITCPKKPE--GSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGI------TVGL---KDWLRI 395 (422)
Q Consensus 327 ~~l~~~L~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~------~~~~---~~~iRi 395 (422)
+.+.+.|++++++.+. .|. .+.++++.++.. +..++...+ .++||.+.+|. .++. .+++||
T Consensus 313 ~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~~------~~~~~~~~L-~~~gi~v~~g~~~~~~~~~g~~~~~~~iRi 384 (406)
T 3cai_A 313 DYLMVSLRSLPLVMLI-GRPEAQIPVVSFAVHKV------PADRVVQRL-ADNGILAIANTGSRVLDVLGVNDVGGAVTV 384 (406)
T ss_dssp HHHHHHHHTCTTEEEC-CCCSSBCSEEEEEETTB------CHHHHHHHH-HHTTEECEECCSCHHHHHHTTTTTTCCEEE
T ss_pred HHHHHHHhcCCCeEEc-CCccccCCEEEEEECCc------CHHHHHHHH-HHCCcEEecCChHHHHHHcCCCCCCCeEEE
Confidence 9999999998887633 442 133677777531 466676666 56799999987 2332 478999
Q ss_pred Eec--cChHHHHHHHHHHHH
Q 014603 396 TFA--VEPSALEDGLGRMKA 413 (422)
Q Consensus 396 s~~--~~~~~l~~~~~~l~~ 413 (422)
+++ ++++++++++++|++
T Consensus 385 s~~~~~t~e~i~~~~~~l~~ 404 (406)
T 3cai_A 385 GLAHYSTMAEVDQLVRALAS 404 (406)
T ss_dssp ECCTTCCHHHHHHHHHHHHT
T ss_pred EeecCCCHHHHHHHHHHHHH
Confidence 998 578999999998875
No 109
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=100.00 E-value=3.1e-33 Score=262.03 Aligned_cols=329 Identities=12% Similarity=0.117 Sum_probs=232.7
Q ss_pred CCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHH
Q 014603 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI 123 (422)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~ 123 (422)
.+++|||+.+.+. +++|.+.+++.++... ....|++.....++++++++++ + .+.++++++|+++++
T Consensus 6 ~~~~id~~~~~~~-----~~~~~v~~a~~~~~~~-~~~~~~~~~~~~~l~~~la~~~------g-~~~~v~~~~~gt~a~ 72 (356)
T 1v72_A 6 RPPALGFSSDNIA-----GASPEVAQALVKHSSG-QAGPYGTDELTAQVKRKFCEIF------E-RDVEVFLVPTGTAAN 72 (356)
T ss_dssp CCCCCBCSCGGGC-----CCCHHHHHHHHHTTSS-CCCSTTCSHHHHHHHHHHHHHH------T-SCCEEEEESCHHHHH
T ss_pred CCceEeeccCCcc-----CCCHHHHHHHHhhccC-cccccccchHHHHHHHHHHHHh------C-CCCcEEEeCCccHHH
Confidence 4678999987533 5678999999988642 2345655444567777777776 2 244699999999999
Q ss_pred HHHHHHhcCCCCEEEecCCCccchHHH--HhhC--CCeEEEeeccCCCCcccCHHHHHH-hhcC-------CceEEEEeC
Q 014603 124 EVILTVLARPGANILLPRPGFPYYEAR--ATHS--HLEVRHFDLLPAKGWEVDLDAVEA-LADE-------NTVALVIIN 191 (422)
Q Consensus 124 ~~~~~~l~~~gd~Vl~~~~~~~~~~~~--~~~~--g~~~~~~~~~~~~~~~~d~~~l~~-~~~~-------~~~~i~i~~ 191 (422)
..++.+++++||+|+++.|+|...... +... |.+++.++.+ ++.+|++.|++ .+++ +++++++++
T Consensus 73 ~~al~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~---~~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~ 149 (356)
T 1v72_A 73 ALCLSAMTPPWGNIYCHPASHINNDECGAPEFFSNGAKLMTVDGP---AAKLDIVRLRERTREKVGDVHTTQPACVSITQ 149 (356)
T ss_dssp HHHHHTSCCTTEEEEECTTSHHHHSSTTHHHHHTTSCEEEECCCG---GGCCCHHHHHHHTTSSTTCTTSCEEEEEEEES
T ss_pred HHHHHHhcCCCCEEEEcCccchhhhhchHHHHHhCCcEEEEecCC---CCeEcHHHHHHHhhhcchhhccCCceEEEEEc
Confidence 999999999999999999999765544 5555 8888888763 35789999999 8875 578889999
Q ss_pred CCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccc--cCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEe
Q 014603 192 PGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLA--FGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVT 269 (422)
Q Consensus 192 p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~--~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~ 269 (422)
|+| ||.++|.+++++|.++|++||+++|+|++|..+. +.+.....+ .+....+ +++.|+||+ +.+ ...||+++
T Consensus 150 ~~~-tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~-~~~~~~d-~~~~s~sK~-g~~-~G~g~~~~ 224 (356)
T 1v72_A 150 ATE-VGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEM-TWKAGVD-ALSFGATKN-GVL-AAEAIVLF 224 (356)
T ss_dssp SCT-TSCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTT-TGGGTCC-EEEECCGGG-TCS-SCEEEEES
T ss_pred CCC-CCccCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCCHHHh-hhhhcCC-EEEEecccC-CCc-CccEEEEE
Confidence 886 9999999999999999999999999999997532 122221111 1111112 445699998 432 22347776
Q ss_pred eCCCCcccchhHHHHHHhhhhhccCc---chHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC
Q 014603 270 SDPNGILQDSGIVDSIKSFLNISSDP---ATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPE 346 (422)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~ 346 (422)
+ +++++++.......+.. ....+.++...++. ..+.+..++++++++.+.+.|++++++.+. .|.
T Consensus 225 ~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~ 292 (356)
T 1v72_A 225 N--------TSLATEMSYRRKRAGHLSSKMRFLSAQIDAYLTD---DLWLRNARKANAAAQRLAQGLEGLGGVEVL-GGT 292 (356)
T ss_dssp S--------GGGHHHHHHHHHHTTCCCSSTHHHHHHHHHHTST---THHHHHHHHHHHHHHHHHHHHTTCTTEEEE-SCC
T ss_pred C--------HHHHhhHHHHhhccCchhhhHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHHHHHhhCCCcEEc-cCC
Confidence 4 45666665443221211 22222223334432 334456777888999999999988788733 567
Q ss_pred CceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHHHHHHHHHh
Q 014603 347 GSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 347 ~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~l~~~~~~~ 418 (422)
.++++|+.++ .++...+ .++||.+.||. |+ ++++|++++ ++++++++++++|++++++.
T Consensus 293 ~~~~~~~~~~----------~~~~~~l-~~~gi~v~~g~-~~-~~~iRi~~~~~~~~~~i~~~~~~l~~~l~~~ 353 (356)
T 1v72_A 293 EANILFCRLD----------SAMIDAL-LKAGFGFYHDR-WG-PNVVRFVTSFATTAEDVDHLLNQVRLAADRT 353 (356)
T ss_dssp CSSEEEEEEC----------HHHHHHH-HHTTCBCBCSS-SS-TTEEEEECCTTCCHHHHHHHHHHHHHTC---
T ss_pred CccEEEEEcC----------HHHHHHH-HhcCeEEeccc-cC-CCeEEEEecCCCCHHHHHHHHHHHHHHHHhh
Confidence 7888888774 2566666 56699999887 55 789999987 68999999999999887654
No 110
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=100.00 E-value=1.7e-33 Score=263.40 Aligned_cols=318 Identities=16% Similarity=0.077 Sum_probs=237.3
Q ss_pred CCCcHHHHHHHHHHhhCCCCCCCC-CCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEe
Q 014603 61 FRTASVAVDAIVHSVRSARFNCYS-STVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILL 139 (422)
Q Consensus 61 ~~~~~~v~~a~~~~~~~~~~~~y~-~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~ 139 (422)
.++++.+.+++.+.+.. ..|+ ...+..++|++++++++. ..+++++++|+|+++|+..+++++++ |+|++
T Consensus 9 ~~~~~~v~~a~~~~~~~---~~~~~~~~~~~~l~~~la~~~g~----~~~~~~v~~t~g~t~a~~~~~~~~~~--d~vl~ 79 (353)
T 2yrr_A 9 TPIPERVQKALLRPMRG---HLDPEVLRVNRAIQERLAALFDP----GEGALVAALAGSGSLGMEAGLANLDR--GPVLV 79 (353)
T ss_dssp CCCCHHHHGGGGSCCCC---TTCHHHHHHHHHHHHHHHHHHCC----CTTCEEEEESSCHHHHHHHHHHTCSC--CCEEE
T ss_pred CCCCHHHHHHHhccccc---ccCHHHHHHHHHHHHHHHHHhCC----CCCCceEEEcCCcHHHHHHHHHHhcC--CcEEE
Confidence 46788999998887653 1222 124467889999998832 22467899999999999999999876 89999
Q ss_pred cCCCccch--HHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC-CceEEEEeCCCCCcccccCHHHHHHHHHHHHHcC
Q 014603 140 PRPGFPYY--EARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE-NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLG 216 (422)
Q Consensus 140 ~~~~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~ 216 (422)
++++|+++ ...++..|.+++.++.++ ++.+|++.|++.+++ +++++++++|+||||.+++ +++|.++|+++|
T Consensus 80 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~ 154 (353)
T 2yrr_A 80 LVNGAFSQRVAEMAALHGLDPEVLDFPP--GEPVDPEAVARALKRRRYRMVALVHGETSTGVLNP---AEAIGALAKEAG 154 (353)
T ss_dssp EECSHHHHHHHHHHHHTTCCEEEEECCT--TSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECC---HHHHHHHHHHHT
T ss_pred EcCCCchHHHHHHHHHcCCceEEEeCCC--CCCCCHHHHHHHHHhCCCCEEEEEccCCCcceecC---HHHHHHHHHHcC
Confidence 99999874 455677899999998754 356899999998877 7899999999999999986 668889999999
Q ss_pred cEEEEcccccccccCCCCCCCccccCCCCCeEEEecCcccc-CCCCceeEEEEeeCCCCcccchhHHHHHHh--------
Q 014603 217 IMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRW-IVPGWRLGWLVTSDPNGILQDSGIVDSIKS-------- 287 (422)
Q Consensus 217 ~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~-~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~-------- 287 (422)
+++|+|++|+.. ....++..++. .+++.|++|++ +++| +||++++ +++++++..
T Consensus 155 ~~li~D~a~~~~----~~~~~~~~~~~---d~~~~s~~K~~~~~~g--~G~~~~~--------~~~~~~l~~~~~~~~~~ 217 (353)
T 2yrr_A 155 ALFFLDAVTTLG----MLPFSMRAMGV---DYAFTGSQKCLSAPPG--LAPIAAS--------LEARKAFTGKRGWYLDL 217 (353)
T ss_dssp CEEEEECTTTTT----TSCCCHHHHTC---SEEECCTTSTTCCCSS--CEEEEEC--------HHHHHHCCCCSCSTTCH
T ss_pred CeEEEEcCcccc----cccccccccCc---eEEEecCcccccCCCc--eEEEEEC--------HHHHHHhccCCCccccH
Confidence 999999999642 21223333332 38888999964 4456 7999986 355555430
Q ss_pred --------hhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC--CceEEEEecCc
Q 014603 288 --------FLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPE--GSMFVMVKLNY 357 (422)
Q Consensus 288 --------~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~--~g~~~~~~~~~ 357 (422)
.....++++...+.++.++++...+.++++.+++++++++.+.+.|+++ ++.+. .+. .+.++++.++.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~~~ 295 (353)
T 2yrr_A 218 ARVAEHWERGGYHHTTPVLLHYALLEALDLVLEEGVAARERRAREVYAWVLEELKAR-GFRPY-PKASPLPTVLVVRPPE 295 (353)
T ss_dssp HHHHHHHTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCEES-CSSSBCTTEEEEECCT
T ss_pred HHHhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHC-CCccc-cCccCCCeEEEEECCC
Confidence 0112346677777777777765434447888899999999999999987 77633 343 45666787753
Q ss_pred ccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHH-HHHHHHHHHHHH
Q 014603 358 SLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALE-DGLGRMKAFYDR 417 (422)
Q Consensus 358 ~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~-~~~~~l~~~~~~ 417 (422)
. .+..++...+.+ +||.+.+|..|..++++|++++ .++++++ +++++|++++++
T Consensus 296 ~-----~~~~~~~~~l~~-~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~~~l~~~l~~ 352 (353)
T 2yrr_A 296 G-----VDADRLVRALYA-EGVAVAGGIGPTRGQVLRLGLMGEGARREAYQAFLKALDRALAL 352 (353)
T ss_dssp T-----CCHHHHHHHHHH-TTEECEECCGGGTTTCEEEECSGGGSCHHHHHHHHHHHHHHHHC
T ss_pred C-----CCHHHHHHHHHH-CCEEEeCCccccCCCeEEEecCccCCHHHHHHHHHHHHHHHHhh
Confidence 2 146677776654 5999999987766789999994 6788998 999999988753
No 111
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=100.00 E-value=2.8e-33 Score=264.39 Aligned_cols=322 Identities=15% Similarity=0.153 Sum_probs=237.4
Q ss_pred CCCCceeecCCCCCCCCCCC-CcHHHHHHHHHHhhCC--CCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCH
Q 014603 43 DTRPLIPLGHGDPSAFPSFR-TASVAVDAIVHSVRSA--RFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGC 119 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~-~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~ 119 (422)
++..++||+.+.+.. .+. +++.+.+++.+.+... ....|+ ..+..++++++++++ ++ ++++++++|+
T Consensus 26 ~g~~~ld~~~~~~~~--~~g~~~~~v~~a~~~~~~~~~~~~~~y~-~~~~~~l~~~la~~~------g~-~~~v~~~~g~ 95 (375)
T 2eh6_A 26 EGKEYLDFVSGIGVN--SLGHAYPKLTEALKEQVEKLLHVSNLYE-NPWQEELAHKLVKHF------WT-EGKVFFANSG 95 (375)
T ss_dssp TCCEEEESSHHHHTC--TTCBSCHHHHHHHHHHHHHCSCCCTTBC-CHHHHHHHHHHHHTS------SS-CEEEEEESSH
T ss_pred CCCEEEEcCCccccc--ccCCCCHHHHHHHHHHHHhccccCcccC-CHHHHHHHHHHHhhc------CC-CCeEEEeCch
Confidence 577899999887541 244 7899999999987642 123563 356788999999887 33 4899999999
Q ss_pred HHHHHHHHHH---hc---CCC-CEEEecCCCccchHHHHhhCCCe-------------EEEeeccCCCCcccCHHHHHHh
Q 014603 120 TQAIEVILTV---LA---RPG-ANILLPRPGFPYYEARATHSHLE-------------VRHFDLLPAKGWEVDLDAVEAL 179 (422)
Q Consensus 120 ~~a~~~~~~~---l~---~~g-d~Vl~~~~~~~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~d~~~l~~~ 179 (422)
+++++.++.+ +. ++| |+|++++|+|+++...+...+.. +..++. .|++.|++.
T Consensus 96 t~a~~~~~~~~~~~~~~~~~g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~ 168 (375)
T 2eh6_A 96 TESVEAAIKLARKYWRDKGKNKWKFISFENSFHGRTYGSLSATGQPKFHKGFEPLVPGFSYAKL-------NDIDSVYKL 168 (375)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCSCCSSEEEECT-------TCHHHHHTT
T ss_pred HHHHHHHHHHHHHHhccCCCCCCEEEEECCCcCCCchhhhhhcCCccccCCCCCCCCCceeCCC-------chHHHHHHH
Confidence 9999999875 35 788 99999999998876655443321 222211 489999999
Q ss_pred hcCCceEEEEeCCCCCcccc-cCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccC
Q 014603 180 ADENTVALVIINPGNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWI 258 (422)
Q Consensus 180 ~~~~~~~i~i~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~ 258 (422)
++++++++++++++||||.+ .+.+++++|.++|+++|+++|+||+|+++.+.+.. .++..++...+++ |+||.++
T Consensus 169 l~~~~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~-~~~~~~~~~~d~~---s~SK~~~ 244 (375)
T 2eh6_A 169 LDEETAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGEF-YAYQHFNLKPDVI---ALAKGLG 244 (375)
T ss_dssp CCTTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SGGGGGTCCCSEE---EECGGGG
T ss_pred hcCCeEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcc-hhhhhcCCCCCEE---EEccccc
Confidence 88888999998899999998 56888999999999999999999999976544422 1333333222333 7789987
Q ss_pred CCCceeEEEEeeCCCCcccchhHHHHHHhhh-hhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 014603 259 VPGWRLGWLVTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIP 337 (422)
Q Consensus 259 ~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 337 (422)
+|+|+||++++ +++++.+.... ..+.+.+++.+.++.++|+.. .+..++++++++.+.+.|++++
T Consensus 245 -~g~~~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~l~~~L~~~~ 310 (375)
T 2eh6_A 245 -GGVPIGAILAR--------EEVAQSFTPGSHGSTFGGNPLACRAGTVVVDEV-----EKLLPHVREVGNYFKEKLKELG 310 (375)
T ss_dssp -TTSCCEEEEEE--------HHHHTTCCTTSCCCSSTTCHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHTT
T ss_pred -CCCCeEEEEEc--------HHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHh
Confidence 69999999986 35555554421 223355778888887777652 2677888889999999998874
Q ss_pred CCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHHHHHH
Q 014603 338 CITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGRMKAF 414 (422)
Q Consensus 338 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~l~~~ 414 (422)
. . . .+..|.++|+.++. +..++...+. ++||.+.|+. .+++|++++ ++++++++++++|+++
T Consensus 311 ~-~-~-~~~~g~~~~~~~~~-------~~~~~~~~l~-~~gi~~~~~~----~~~iRi~~~~~~~~~~i~~~~~~l~~~ 374 (375)
T 2eh6_A 311 K-G-K-VKGRGLMLGLELER-------ECKDYVLKAL-EKGLLINCTA----GKVLRFLPPLIIQKEHIDRAISVLREI 374 (375)
T ss_dssp S-S-E-EEEETTEEEEECSS-------CCHHHHHHHH-HTTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred c-C-C-ceEEEEEEEEEEcC-------cHHHHHHHHH-HCCCEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHHh
Confidence 3 2 2 34557888988863 3456666664 5799999863 578999986 6899999999999875
No 112
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=2.7e-32 Score=259.37 Aligned_cols=318 Identities=14% Similarity=0.039 Sum_probs=232.5
Q ss_pred CCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCC--------
Q 014603 62 RTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARP-------- 133 (422)
Q Consensus 62 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~-------- 133 (422)
+++|.+.+++.+++..... .+....+..++++.+++++.+.+ +.++++|++|+|+++|+..++.++..+
T Consensus 41 ~~~~~v~~a~~~~~~~~~~-~~~~~~~~~~~~~~l~~~la~~~--~~~~~~i~~~~ggt~a~~~~~~~~~~~~~~~~~~~ 117 (397)
T 3f9t_A 41 NVLPITRKIVDIFLETNLG-DPGLFKGTKLLEEKAVALLGSLL--NNKDAYGHIVSGGTEANLMALRCIKNIWREKRRKG 117 (397)
T ss_dssp CCCTHHHHHHHHHTTCCTT-SGGGBHHHHHHHHHHHHHHHHHT--TCTTCEEEEESCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCcHHHHHHHHHHHhhcCC-CcccChhHHHHHHHHHHHHHHHh--CCCCCCEEEecCcHHHHHHHHHHHHHHHHhhhhhc
Confidence 5567899999998865321 22222233455555555555544 356789999999999999999998765
Q ss_pred -----CCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC-CceEEEEeCCCCCcccccCHHHHHH
Q 014603 134 -----GANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE-NTVALVIINPGNPCGNVYTYQHLQK 207 (422)
Q Consensus 134 -----gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~i~~p~nptG~~~~~~~l~~ 207 (422)
||+|+++.|+|+++...++..|.+++.++.++ ++.+|++.|++.+++ +++++++++|+||||.+.+ +++
T Consensus 118 ~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~ 192 (397)
T 3f9t_A 118 LSKNEHPKIIVPITAHFSFEKGREMMDLEYIYAPIKE--DYTIDEKFVKDAVEDYDVDGIIGIAGTTELGTIDN---IEE 192 (397)
T ss_dssp CCCCSSCEEEEETTCCTHHHHHHHHHTCEEEEECBCT--TSSBCHHHHHHHHHHSCCCEEEEEBSCTTTCCBCC---HHH
T ss_pred ccCCCCeEEEECCcchhHHHHHHHHcCceeEEEeeCC--CCcCCHHHHHHHHhhcCCeEEEEECCCCCCCCCCC---HHH
Confidence 89999999999999999999999999998754 467899999999987 8999999999999999964 788
Q ss_pred HHHHHHHcCcEEEEcccccccccC--CC--------CCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCccc
Q 014603 208 IAETAKKLGIMVIADEVYDHLAFG--NT--------PFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQ 277 (422)
Q Consensus 208 i~~~~~~~~~~li~D~~~~~~~~~--~~--------~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~ 277 (422)
|.++|+++|+++|+|++|+.+.+. +. ....+.. ...+++.|++|+ +++|.|+|+++++++
T Consensus 193 i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~s~~K~-~~~~~~~g~~~~~~~----- 262 (397)
T 3f9t_A 193 LSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDFSL----GVDSITIDPHKM-GHCPIPSGGILFKDI----- 262 (397)
T ss_dssp HHHHHHHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCCSGGG----TCSEEECCTTTT-TCCCSSCEEEEESSG-----
T ss_pred HHHHHHHhCCeEEEEccccchhhhhcccccccccccccccccc----cCCeEEEccccc-cCCCCCceEEEEeCH-----
Confidence 899999999999999999865432 11 0111111 234888999998 567779999998652
Q ss_pred chhHHHHHHhhhhhc---------cC---cchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 014603 278 DSGIVDSIKSFLNIS---------SD---PATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKP 345 (422)
Q Consensus 278 ~~~~~~~~~~~~~~~---------~~---~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 345 (422)
.+.+.+....... ++ .+...+.++...+. ...+++..++++++++.+.+.|+++ ++.++ .+
T Consensus 263 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~---~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~ 335 (397)
T 3f9t_A 263 --GYKRYLDVDAPYLTETRQATILGTRVGFGGACTYAVLRYLG---REGQRKIVNECMENTLYLYKKLKEN-NFKPV-IE 335 (397)
T ss_dssp --GGGGGTCEECTTSSSSEECSSCSSCCSHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHT-TCCBS-SC
T ss_pred --HHHHhhccCCccccCCCccccccccccchHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHHHHC-CCEEE-cC
Confidence 2333332111110 11 23344555544443 4667888888999999999999998 77644 44
Q ss_pred CCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHHHHHHHH
Q 014603 346 EGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGRMKAFYD 416 (422)
Q Consensus 346 ~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~l~~~~~ 416 (422)
..+.++++.++ +..++...+ .++||.+.++.. ++++||+++ ++++++++++++|+++++
T Consensus 336 ~~~~~~~~~~~--------~~~~~~~~l-~~~gi~v~~~~~---~~~~Ri~~~~~~~~e~i~~~~~~l~~~l~ 396 (397)
T 3f9t_A 336 PILNIVAIEDE--------DYKEVCKKL-RDRGIYVSVCNC---VKALRIVVMPHIKREHIDNFIEILNSIKR 396 (397)
T ss_dssp CSSSEEEEECT--------THHHHHHHH-HHTTCBCEECSS---SSEEEEECCTTCCHHHHHHHHHHHHHHC-
T ss_pred CCccEEEEEeC--------CHHHHHHHH-HhCCeEEeccCC---CCEEEEEEcCCCCHHHHHHHHHHHHHhhC
Confidence 45667777765 345666666 455999999764 589999998 689999999999998764
No 113
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=100.00 E-value=2.5e-32 Score=261.48 Aligned_cols=331 Identities=13% Similarity=0.059 Sum_probs=241.6
Q ss_pred CCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCC--CCCCHHHHHHHHHHHhhcCCCCCCCCCEE-EecCHHH
Q 014603 45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSS--TVGILPARRAIADYLNRDLPYKLSPDDVY-LTLGCTQ 121 (422)
Q Consensus 45 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~--~~g~~~lr~~ia~~l~~~~~~~~~~~~i~-~~~g~~~ 121 (422)
+..+.|+-+. .+.++.+.+++.+.. ...|.+ .....++++++++++ +.+++.++ +++|+++
T Consensus 10 ~~~~~~~p~p------~~~~~~v~~a~~~~~----~~~~~~~~~~~~~~l~~~la~~~------g~~~~~~~~~~~s~t~ 73 (416)
T 3isl_A 10 PLRTIMTPGP------VEVDPRVLRVMSTPV----VGQFDPAFTGIMNETMEMLRELF------QTKNRWAYPIDGTSRA 73 (416)
T ss_dssp CCCEECSSSS------CCCCHHHHHHTTSCC----CCTTSHHHHHHHHHHHHHHHHHT------TCCCSEEEEEESCHHH
T ss_pred ccceeecCCC------cCcCHHHHHHhcccC----CCCccHHHHHHHHHHHHHHHHHh------CCCCCcEEEecCcHHH
Confidence 3445555443 345677777665522 223332 223556677777776 34566565 8899999
Q ss_pred HHHHHHHHhcCCCCEEEecCCCccc--hHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhc-CCceEEEEeCCCCCccc
Q 014603 122 AIEVILTVLARPGANILLPRPGFPY--YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALAD-ENTVALVIINPGNPCGN 198 (422)
Q Consensus 122 a~~~~~~~l~~~gd~Vl~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~i~i~~p~nptG~ 198 (422)
++..++.+++++||+|+++.|+|++ +...++..|.+++.++.+. ++.+|++.|++.++ ++++++++++|+||||.
T Consensus 74 al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~ 151 (416)
T 3isl_A 74 GIEAVLASVIEPEDDVLIPIYGRFGYLLTEIAERYGANVHMLECEW--GTVFDPEDIIREIKKVKPKIVAMVHGETSTGR 151 (416)
T ss_dssp HHHHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHHCCSEEEEESEETTTTE
T ss_pred HHHHHHHHhcCCCCEEEEecCCcccHHHHHHHHhcCCeeEEEecCC--CCCCCHHHHHHHHhhCCCcEEEEEccCCCCce
Confidence 9999999999999999999999987 7778888999999999764 34689999999987 58899999999999999
Q ss_pred ccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccc
Q 014603 199 VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQD 278 (422)
Q Consensus 199 ~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~ 278 (422)
+++ +++|.++|+++|+++|+|++|+... ...++...+. .+++.|++|+++ .+.++|+++++
T Consensus 152 ~~~---l~~i~~l~~~~~~~li~D~a~~~~~----~~~~~~~~~~---d~~~~s~~K~l~-g~~g~g~~~~~-------- 212 (416)
T 3isl_A 152 IHP---LKAIGEACRTEDALFIVDAVATIGG----CEVKVDEWKI---DAAIGGTQKCLS-VPSGMAPITYN-------- 212 (416)
T ss_dssp ECC---CHHHHHHHHHTTCEEEEECTTTTTT----SCCCTTTTTC---SEEECCSSSTTC-CCSSEEEEEEC--------
T ss_pred ecC---HHHHHHHHHHcCCEEEEECCccccC----CCcchhhcCC---CEEEecCccccC-CCCCeEEEEEC--------
Confidence 976 7888999999999999999987522 1222222332 388999999732 23348999886
Q ss_pred hhHHHHHHhhh---------------------------------------hhccCcchHHHHHHHHHHhhchHHHHHHHH
Q 014603 279 SGIVDSIKSFL---------------------------------------NISSDPATFIQGAVPQILEKTEEEFFSKIT 319 (422)
Q Consensus 279 ~~~~~~~~~~~---------------------------------------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~ 319 (422)
+++++++.... ...++++...+.++.++++...+..+++..
T Consensus 213 ~~~~~~~~~~~~~~~Gw~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~ 292 (416)
T 3isl_A 213 ERVADVIAARKKVERGIATQADRAALSGNRPITSNYFDLSQLEDYWSERRLNHHTEATTMLYALREGVRLVLEEGLETRF 292 (416)
T ss_dssp HHHHHHHHTC------------------CCCCSCSTTCHHHHHHHTSTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred HHHHHHhhccccccccccccccchhccCCCCCCccccchHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHH
Confidence 45666665321 112356677777777777754333478899
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCCCCC---ceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEE
Q 014603 320 DILRETADICCDRLKEIPCITCPKKPEG---SMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRIT 396 (422)
Q Consensus 320 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis 396 (422)
++++++++.+.+.|++. ++.+. .+.+ +.++++.++.. .+..++...+.+++||.+.+|.....++++||+
T Consensus 293 ~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~~~~~-----~~~~~l~~~L~~~~gi~v~~g~~~~~~~~iRi~ 365 (416)
T 3isl_A 293 ERHRHHEAALAAGIKAM-GLRLF-GDDSCKMPVVTCVEIPGG-----IDGESVRDMLLAQFGIEIASSFGPLAGKIWRIG 365 (416)
T ss_dssp HHHHHHHHHHHHHHHHT-TCCBC-SCGGGBCTTEEEEECCTT-----CCHHHHHHHHHHHHCEECBCCCSTTTTTEEEEE
T ss_pred HHHHHHHHHHHHHHHHc-CCEec-cCccccCCcEEEEeCCCC-----CCHHHHHHHHHHhCCEEEecCCCCCCCCEEEEe
Confidence 99999999999999996 77733 4433 56777777532 256778777766669999998765557899999
Q ss_pred ec--cChHH-HHHHHHHHHHHHHHhc
Q 014603 397 FA--VEPSA-LEDGLGRMKAFYDRHA 419 (422)
Q Consensus 397 ~~--~~~~~-l~~~~~~l~~~~~~~~ 419 (422)
++ .++++ +++++++|+++++++.
T Consensus 366 ~~~~~~~~e~i~~~~~~l~~~~~~~~ 391 (416)
T 3isl_A 366 TMGYSCRKENVLFVLAGLEAVLLRHN 391 (416)
T ss_dssp CCGGGCSHHHHHHHHHHHHHHHHHTT
T ss_pred cccCCCcHHHHHHHHHHHHHHHHHcC
Confidence 94 44555 9999999999998763
No 114
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=100.00 E-value=2.8e-33 Score=267.22 Aligned_cols=336 Identities=17% Similarity=0.203 Sum_probs=239.8
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCC--CCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARF--NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT 120 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~ 120 (422)
+++.++||+.+.+....++ .+|.+.+++.+++..... ..|+ .....++++++++++ ..+++++|+|++
T Consensus 37 ~g~~~lD~~~~~~~~~lg~-~~p~v~~a~~~~~~~~~~~~~~~~-~~~~~~l~~~la~~~--------~~~~v~~~~gg~ 106 (406)
T 4adb_A 37 QGKEYIDFAGGIAVNALGH-AHPELREALNEQASKFWHTGNGYT-NEPVLRLAKKLIDAT--------FADRVFFCNSGA 106 (406)
T ss_dssp TCCEEEESSHHHHTCTTCB-TCHHHHHHHHHHHTTCSCCCTTSC-CHHHHHHHHHHHHHS--------SCSEEEEESSHH
T ss_pred CCCEEEECCCchhhcccCC-CCHHHHHHHHHHHHhcccccCCcC-CHHHHHHHHHHHhhC--------CCCeEEEeCcHH
Confidence 5778899998844322333 578999999998875321 1232 223456666666665 345999999999
Q ss_pred HHHHHHHHHhcC-------CC-CEEEecCCCccchHHHHhhCCC-------------eEEEeeccCCCCcccCHHHHHHh
Q 014603 121 QAIEVILTVLAR-------PG-ANILLPRPGFPYYEARATHSHL-------------EVRHFDLLPAKGWEVDLDAVEAL 179 (422)
Q Consensus 121 ~a~~~~~~~l~~-------~g-d~Vl~~~~~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~d~~~l~~~ 179 (422)
+|++.++++++. +| |+|++++|+|+++...+...+. ++..++. .|++.|++.
T Consensus 107 ~a~~~al~~~~~~~~~~~~~g~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~ 179 (406)
T 4adb_A 107 EANEAALKLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAY-------NDINSASAL 179 (406)
T ss_dssp HHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEECT-------TCHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEeCC-------CcHHHHHHH
Confidence 999999998864 56 9999999999988555544433 2222221 378999999
Q ss_pred hcCCceEEEEeCCCCCccccc--CHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCcccc
Q 014603 180 ADENTVALVIINPGNPCGNVY--TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRW 257 (422)
Q Consensus 180 ~~~~~~~i~i~~p~nptG~~~--~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~ 257 (422)
+++++++++++ |+||+|.++ +.+++++|.++|++||+++|+||+|+++.+.|... .+...+...+++ |+||.+
T Consensus 180 l~~~~~~v~~~-p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~-~~~~~~~~~d~~---t~sK~~ 254 (406)
T 4adb_A 180 IDDSTCAVIVE-PIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTGELY-AYMHYGVTPDLL---TTAKAL 254 (406)
T ss_dssp CSTTEEEEEEC-SEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-HHHHHTCCCSEE---EECGGG
T ss_pred hcCCeEEEEEe-CCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhH-HHHhcCCCCCEE---Eechhh
Confidence 98888888777 999999987 99999999999999999999999999876665432 222333333333 569998
Q ss_pred CCCCceeEEEEeeCCCCcccchhHHHHHHhhh-hhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcC
Q 014603 258 IVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEI 336 (422)
Q Consensus 258 ~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 336 (422)
+ +|+|+||++++ +++++.+.... ..+.+++++.+.++.++|+.... ++..++++++++.+.+.|+++
T Consensus 255 ~-~G~r~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~~ 322 (406)
T 4adb_A 255 G-GGFPVGALLAT--------EECARVMTVGTHGTTYGGNPLASAVAGKVLELINT---PEMLNGVKQRHDWFVERLNTI 322 (406)
T ss_dssp G-TTSCCEEEEEC--------HHHHHTCCTTSSCCSSTTCHHHHHHHHHHHHHHSS---HHHHHHHHHHHHHHHHHHHHH
T ss_pred c-CCCCeEEEEEc--------HHHHhhhccCCcCCCCCCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHH
Confidence 7 89999999986 46777666543 23457788999999888875321 456677777778887777764
Q ss_pred CC-CCCC-CCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHHHH
Q 014603 337 PC-ITCP-KKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGRMK 412 (422)
Q Consensus 337 ~~-~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~l~ 412 (422)
.. ...+ ..+..+.++++.++... ..+..++...+. ++||.+.|+. .+++|++++ ++++++++++++|+
T Consensus 323 ~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~l~-~~gi~v~~~~----~~~iRi~~~~~~~~e~i~~~~~~l~ 394 (406)
T 4adb_A 323 NHRYGLFSEVRGLGLLIGCVLNADY---AGQAKQISQEAA-KAGVMVLIAG----GNVVRFAPALNVSEEEVTTGLDRFA 394 (406)
T ss_dssp HHHHCCEEEEEEETTEEEEEECTTT---TTCHHHHHHHHH-HTTEECEESS----TTEEEECCCTTCCHHHHHHHHHHHH
T ss_pred HHhCCCceEEEEEEEEEEEEEeCCc---HHHHHHHHHHHH-HCCcEEeecC----CCeEEEECCCCCCHHHHHHHHHHHH
Confidence 11 1101 12234678888886421 013566777665 4599999864 689999765 78999999999999
Q ss_pred HHHHHhcc
Q 014603 413 AFYDRHAK 420 (422)
Q Consensus 413 ~~~~~~~~ 420 (422)
++++++.+
T Consensus 395 ~~l~~~~~ 402 (406)
T 4adb_A 395 AACEHFVS 402 (406)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHHh
Confidence 99988754
No 115
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=100.00 E-value=1e-32 Score=259.50 Aligned_cols=330 Identities=13% Similarity=0.120 Sum_probs=241.3
Q ss_pred CceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCC-C-CCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHH
Q 014603 46 PLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSS-T-VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI 123 (422)
Q Consensus 46 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~-~-~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~ 123 (422)
.+++|+.| |. +.++++.+++.+++. ..|+. . .+..++|++++++++. +.+++++++|+|+++|+
T Consensus 4 ~~~~~~~g-p~-----~~~~~v~~a~~~~~~----~~~~~~~~~~~~~l~~~la~~~g~----~~~~~~v~~~~g~t~a~ 69 (366)
T 1m32_A 4 NYLLLTPG-PL-----TTSRTVKEAMLFDSC----TWDDDYNIGVVEQIRQQLTALATA----SEGYTSVLLQGSGSYAV 69 (366)
T ss_dssp -CEECSSS-SC-----CCCHHHHHTTCCCCC----TTSHHHHTTTHHHHHHHHHHHHCS----SSSEEEEEEESCHHHHH
T ss_pred ccccccCC-Cc-----CCCHHHHHHHhhhhc----CCCHHHHHHHHHHHHHHHHHHhCC----CCcCcEEEEecChHHHH
Confidence 36889888 32 567899998877531 12221 1 6789999999999941 22335799999999999
Q ss_pred HHHHHHhcCCCCEEEecC-CCccc-hHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC--CceEEEEeCCCCCcccc
Q 014603 124 EVILTVLARPGANILLPR-PGFPY-YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE--NTVALVIINPGNPCGNV 199 (422)
Q Consensus 124 ~~~~~~l~~~gd~Vl~~~-~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~--~~~~i~i~~p~nptG~~ 199 (422)
+.++++++++||+|++.+ ++|.. +...+...|.+++.++.+. ++.+|++.|++.+++ +++++++++|+||||.+
T Consensus 70 ~~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~ 147 (366)
T 1m32_A 70 EAVLGSALGPQDKVLIVSNGAYGARMVEMAGLMGIAHHAYDCGE--VARPDVQAIDAILNADPTISHIAMVHSETTTGML 147 (366)
T ss_dssp HHHHHHSCCTTCCEEEEESSHHHHHHHHHHHHHTCCEEEEECCT--TSCCCHHHHHHHHHHCTTCCEEEEESEETTTTEE
T ss_pred HHHHHHhcCCCCeEEEEeCCCccHHHHHHHHHhCCceEEEeCCC--CCCCCHHHHHHHHhcCCCeEEEEEecccCCccee
Confidence 999999999999988776 55543 5566777899999888753 456899999998865 47888899999999999
Q ss_pred cCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccch
Q 014603 200 YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDS 279 (422)
Q Consensus 200 ~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~ 279 (422)
++ +++|.++|+++|+++|+|++|+.... ...+...+ ..+++.|+||++++ +.++||+++++
T Consensus 148 ~~---l~~i~~l~~~~~~~li~Dea~~~~~~----~~~~~~~~---~di~~~s~~K~~~~-~~g~G~~~~~~-------- 208 (366)
T 1m32_A 148 NP---IDEVGALAHRYGKTYIVDAMSSFGGI----PMDIAALH---IDYLISSANKCIQG-VPGFAFVIARE-------- 208 (366)
T ss_dssp CC---HHHHHHHHHHHTCEEEEECTTTTTTS----CCCTTTTT---CSEEEEESSSTTCC-CSSEEEEEEEH--------
T ss_pred cC---HHHHHHHHHHcCCEEEEECCccccCc----CccccccC---ccEEEecCcccccC-CCceEEEEECH--------
Confidence 87 77889999999999999999985321 12222222 34889999997533 23479999873
Q ss_pred hHHHHHHhhh------------------h-hccCcchHHHHHHHHHHhhchHHH-HHHHHHHHHHHHHHHHHHhhcCCCC
Q 014603 280 GIVDSIKSFL------------------N-ISSDPATFIQGAVPQILEKTEEEF-FSKITDILRETADICCDRLKEIPCI 339 (422)
Q Consensus 280 ~~~~~~~~~~------------------~-~~~~~~~~~~~a~~~~l~~~~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~ 339 (422)
++++++.... . ..++++...+.++.++++...+.. +++.+++++++++.+.+.|+++ ++
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~-~~ 287 (366)
T 1m32_A 209 QKLAACKGHSRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRAL-GF 287 (366)
T ss_dssp HHHTTCTTCCSCSTTCHHHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHT-TC
T ss_pred HHHHhhcCCCCCccccHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHHccCHhHHHHHHHHHHHHHHHHHHHC-CC
Confidence 4444332210 0 023667777878888887543322 6788899999999999999988 77
Q ss_pred CCCCCC---CCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHHHHHH
Q 014603 340 TCPKKP---EGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGRMKAF 414 (422)
Q Consensus 340 ~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~l~~~ 414 (422)
.+. .+ ..+.++|+.++.. .+ .+..++...+. ++||.+.+|..| ..+++|++++ ++++++++++++|+++
T Consensus 288 ~~~-~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~l~-~~gi~v~~~~~~-~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 361 (366)
T 1m32_A 288 NTL-LDDELHSPIITAFYSPED--PQ-YRFSEFYRRLK-EQGFVIYPGKVS-QSDCFRIGNIGEVYAADITALLTAIRTA 361 (366)
T ss_dssp CBS-SCGGGBCSSEEEEECCCC--TT-CCHHHHHHHHH-HTTEECEECCCS-SSCEEEEECCSSCCHHHHHHHHHHHHHH
T ss_pred eec-cCchhcCceEEEEEcCcc--CC-CCHHHHHHHHH-HCCEEEECCcCC-CCCEEEEecCCCCCHHHHHHHHHHHHHH
Confidence 633 33 3566888888630 00 24667777765 459999998876 3689999998 5789999999999988
Q ss_pred HHH
Q 014603 415 YDR 417 (422)
Q Consensus 415 ~~~ 417 (422)
+++
T Consensus 362 ~~~ 364 (366)
T 1m32_A 362 MYW 364 (366)
T ss_dssp CTT
T ss_pred HHh
Confidence 754
No 116
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=100.00 E-value=1.4e-32 Score=263.17 Aligned_cols=339 Identities=14% Similarity=0.138 Sum_probs=228.7
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 122 (422)
++..++||+.+.+....++..+|.+.+++.+++.... .|++..+..+.+..+++.+.+.+|... +++|++|+|+++|
T Consensus 40 ~g~~~lD~~~~~~~~~lG~~~~p~v~~a~~~~~~~~~--~~~~~~~~~~~~~~l~~~la~~~~~~~-~~~v~~~~gg~ea 116 (419)
T 2eo5_A 40 DGNKYLDFTSGIGVNNLGWPSHPEVIKIGIEQMQKLA--HAAANDFYNIPQLELAKKLVTYSPGNF-QKKVFFSNSGTEA 116 (419)
T ss_dssp TSCEEEESSGGGGTTTTCBSCCHHHHHHHHHHHTTSC--CCSCSCSCCHHHHHHHHHHHHHSSCSS-CEEEEEESSHHHH
T ss_pred CCCEEEEccCChhhhccCCCCCHHHHHHHHHHHhhCc--cccccccCCHHHHHHHHHHHHhCCCCc-CCEEEEeCchHHH
Confidence 5677899988875422222227999999999986532 222111222334444444444343222 7899999999999
Q ss_pred HHHHHHHhcC-CCCEEEecCCCccchHHHHh-hC-------------CCeEEEeeccCCC--Ccc------------cCH
Q 014603 123 IEVILTVLAR-PGANILLPRPGFPYYEARAT-HS-------------HLEVRHFDLLPAK--GWE------------VDL 173 (422)
Q Consensus 123 ~~~~~~~l~~-~gd~Vl~~~~~~~~~~~~~~-~~-------------g~~~~~~~~~~~~--~~~------------~d~ 173 (422)
++.+++++.. +||+|++++|+|+++...+. .. ..+++.++.+... +++ +|+
T Consensus 117 ~~~ai~~~~~~~~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~ 196 (419)
T 2eo5_A 117 IEASIKVVKNTGRKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPYPNPYRNPWHINGYENPSELVNRVI 196 (419)
T ss_dssp HHHHHHHHHTTSCCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEECCCCSSSCTTCCCTTTCHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCcEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEECCCccccccccccccccchhhHHHHH
Confidence 9999987643 38999999999987544322 11 1245666653210 112 367
Q ss_pred HHHH-HhhcC----CceEEEEeCCC-CCccc-ccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCC
Q 014603 174 DAVE-ALADE----NTVALVIINPG-NPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP 246 (422)
Q Consensus 174 ~~l~-~~~~~----~~~~i~i~~p~-nptG~-~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~ 246 (422)
+.|+ +.+++ +..++++++|+ ||||. .++.+++++|.++|++||+++|+||+|.++.+.|.. ..+...+..++
T Consensus 197 ~~l~~~~i~~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~~-~~~~~~~~~~d 275 (419)
T 2eo5_A 197 EFIEDYIFVNLVPPEEVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGKL-FAIENFNTVPD 275 (419)
T ss_dssp HHHHHTHHHHTCCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SGGGGGTCCCS
T ss_pred HHHHHHHHhhccCCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcch-hhHHhcCCCCC
Confidence 8898 87763 34456678885 57896 678888999999999999999999999987665542 12222232233
Q ss_pred eEEEecCccccCCCC-ceeEEEEeeCCCCcccchhHHHHHHhhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHH
Q 014603 247 VLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRET 325 (422)
Q Consensus 247 ~i~i~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 325 (422)
+ .|+||.|++ | +|+||+++++ +++ .+......+.+.++++++++.++|+.. ++..++++++
T Consensus 276 ~---~t~sK~~~~-G~~riG~~~~~~--------~~~-~~~~~~~~t~~~n~~~~~aa~aal~~~-----~~~~~~~~~~ 337 (419)
T 2eo5_A 276 V---ITLAKALGG-GIMPIGATIFRK--------DLD-FKPGMHSNTFGGNALACAIGSKVIDIV-----KDLLPHVNEI 337 (419)
T ss_dssp E---EEECGGGGT-TTSCCEEEEEEG--------GGC-CC------CCCCCHHHHHHHHHHHHHH-----HHHHHHHHHH
T ss_pred E---EEecccccC-CccceEEEEEch--------Hhh-cCCcccCCCCCCCHHHHHHHHHHHHHH-----HHHHHHHHHH
Confidence 3 378999874 9 9999999874 344 341122334567889999999999752 2277888899
Q ss_pred HHHHHHHhhcCCCCCCCCCCCCceEEEEecC-cccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChH
Q 014603 326 ADICCDRLKEIPCITCPKKPEGSMFVMVKLN-YSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPS 402 (422)
Q Consensus 326 ~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~ 402 (422)
++.+.+.|+++ +. . .+..|.++++.+. ... ... +...++ ++||.+.|+. .+++||+++ ++++
T Consensus 338 ~~~l~~~L~~~--~~-~-~~~~g~~~~i~~~~~~~-----~~~-~~~~l~-~~Gv~v~~~~----~~~lRis~~~~~t~e 402 (419)
T 2eo5_A 338 GKIFAEELQGL--AD-D-VRGIGLAWGLEYNEKKV-----RDR-IIGESF-KRGLLLLPAG----RSAIRVIPPLVISEE 402 (419)
T ss_dssp HHHHHHHHTTS--SS-E-EEEETTEEEEECSCHHH-----HHH-HHHHHH-HTTEECEEET----TTEEEECCCTTCCHH
T ss_pred HHHHHHHHHHh--hh-h-eEeeeEEEEEEEecCcc-----HHH-HHHHHH-HCCCEEecCC----CCEEEEECCCCCCHH
Confidence 99999999876 32 2 2344778888883 210 133 555554 6799999864 578999876 7899
Q ss_pred HHHHHHHHHHHHHHHh
Q 014603 403 ALEDGLGRMKAFYDRH 418 (422)
Q Consensus 403 ~l~~~~~~l~~~~~~~ 418 (422)
++++++++|+++++++
T Consensus 403 ~i~~~l~~l~~~l~~~ 418 (419)
T 2eo5_A 403 EAKQGLDILKKVIKVV 418 (419)
T ss_dssp HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhc
Confidence 9999999999998764
No 117
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=100.00 E-value=1.5e-32 Score=257.59 Aligned_cols=333 Identities=13% Similarity=0.086 Sum_probs=234.8
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 122 (422)
+.+.+|+|+++.+. ++++.+.+++.+++.. |....+..++++.+++++.+.+| .++++|++|+|++++
T Consensus 11 ~~p~~i~l~~~~~~-----~~~~~v~~a~~~~~~~-----~~~~~g~~~~~~~~~~~l~~~~g--~~~~~v~~~~g~t~a 78 (359)
T 1svv_A 11 AKPKPYSFVNDYSV-----GMHPKILDLMARDNMT-----QHAGYGQDSHCAKAARLIGELLE--RPDADVHFISGGTQT 78 (359)
T ss_dssp ----CEECSCSCSS-----CCCHHHHHHHHHHTTC-----CCCSTTCSHHHHHHHHHHHHHHT--CTTSEEEEESCHHHH
T ss_pred CCCeeEEecCCCcC-----CCCHHHHHHHHHHHhh-----ccccccccHHHHHHHHHHHHHhC--CCCccEEEeCCchHH
Confidence 34668999986533 5778999999998753 55545666777777777776554 567899999999999
Q ss_pred HHHHHHHhcCCCCEEEecCCCccchHH--HHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCC-------ceEEEEeCCC
Q 014603 123 IEVILTVLARPGANILLPRPGFPYYEA--RATHSHLEVRHFDLLPAKGWEVDLDAVEALADEN-------TVALVIINPG 193 (422)
Q Consensus 123 ~~~~~~~l~~~gd~Vl~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~-------~~~i~i~~p~ 193 (422)
++.++++++++||+|++++|+|+++.. .++..|.+++.++.+ ++.+|++.|++.++++ ++++++++|
T Consensus 79 ~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~---~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~- 154 (359)
T 1svv_A 79 NLIACSLALRPWEAVIATQLGHISTHETGAIEATGHKVVTAPCP---DGKLRVADIESALHENRSEHMVIPKLVYISNT- 154 (359)
T ss_dssp HHHHHHHHCCTTEEEEEETTSHHHHSSTTHHHHTTCCEEEECCT---TSCCCHHHHHHHHHHSCSTTSCEEEEEEEESS-
T ss_pred HHHHHHHHhCCCCEEEEcccchHHHHHHHHHhcCCCeeEEEeCC---CCeecHHHHHHHHHHHHhccCCCceEEEEEcC-
Confidence 999999999999999999999998876 477889999988863 5679999999988665 788999998
Q ss_pred CCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCC-CCCeEEEecCccccCCCCceeEEEEeeCC
Q 014603 194 NPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IVPVLTLGSISKRWIVPGWRLGWLVTSDP 272 (422)
Q Consensus 194 nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~-~~~~i~i~s~sK~~~~~G~r~G~~~~~~~ 272 (422)
||||.++|.+++++|.++|+++|+++|+||+|..+.+.... .....+.. ....++..|++|. +.+ .++|++++++
T Consensus 155 ~ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~-~~~~~~~~~~~~d~~~~s~~K~-g~~-~~~g~l~~~~- 230 (359)
T 1svv_A 155 TEVGTQYTKQELEDISASCKEHGLYLFLDGARLASALSSPV-NDLTLADIARLTDMFYIGATKA-GGM-FGEALIILND- 230 (359)
T ss_dssp CTTSCCCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTT-CCCCHHHHHHHCSEEEEECTTT-TCS-SCEEEEECSG-
T ss_pred CCCceecCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCC-cchhhhhhhhcCCEEEEecccC-CCC-CceEEEEEcc-
Confidence 79999999999999999999999999999999543221111 11111100 0112677889997 443 4578888752
Q ss_pred CCcccchhHHHHHHhhh---hhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCce
Q 014603 273 NGILQDSGIVDSIKSFL---NISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSM 349 (422)
Q Consensus 273 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~ 349 (422)
++++.+.... ......+.....++.++++. ..+++..++++++++.+.+.| +.+++. +..|.+++
T Consensus 231 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~l~~~L-~~~~~~-~~~~~~~~ 298 (359)
T 1svv_A 231 -------ALKPNARHLIKQRGALMAKGWLLGIQFEVLMKD---NLFFELGAHSNKMAAILKAGL-EACGIR-LAWPSASN 298 (359)
T ss_dssp -------GGCTTHHHHHHHTTCCCTTTHHHHHHHHHHTST---THHHHHHHHHHHHHHHHHHHH-HHTTCC-BSSCCSSS
T ss_pred -------cHHHHHHHHHhcCCcccccchhhHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHh-ccCCeE-EccCCccc
Confidence 4444444332 11111122222333345543 345778888999999999999 556887 44677788
Q ss_pred EEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHHHHHHHHHh
Q 014603 350 FVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~l~~~~~~~ 418 (422)
++|+.++ .++...+++++||.+.+.. ....+++|++++ ++++++++++++|++++++.
T Consensus 299 ~~~~~~~----------~~~~~~l~~~~gi~v~~~~-~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 358 (359)
T 1svv_A 299 QLFPILE----------NTMIAELNNDFDMYTVEPL-KDGTCIMRLCTSWATEEKECHRFVEVLKRLVAST 358 (359)
T ss_dssp EECBEEE----------HHHHHHHTTTEECEEEEEE-TTTEEEEEEECCTTCCHHHHHHHHHHHHHC----
T ss_pred eEEEEcC----------HHHHHHHHHhcCEEEEecc-cCCCceEEEEccCcCCHHHHHHHHHHHHHHHhcc
Confidence 8887663 3566666555599983311 123578999986 68999999999999887653
No 118
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=100.00 E-value=1.3e-32 Score=264.46 Aligned_cols=356 Identities=12% Similarity=0.090 Sum_probs=226.2
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 122 (422)
+++.++||..+.+....+ ..+|.+.+++.+++... ..|.+..+..+.++.+++++.+.++ .+.++|++|+|+++|
T Consensus 27 ~g~~~lD~~~~~~~~~lG-~~~p~v~~a~~~~~~~~--~~~~~~~~~~~~~~~l~~~la~~~~--~~~~~v~~~~gg~ea 101 (430)
T 3i4j_A 27 AGRRYLDGSSGALVANIG-HGRAEVGERMAAQAARL--PFVHGSQFSSDVLEEYAGRLARFVG--LPTFRFWAVSGGSEA 101 (430)
T ss_dssp TSCEEEETTHHHHTCTTC-BCCHHHHHHHHHHHHHC--CCCCTTTCEEHHHHHHHHHHHHHTT--CTTCEEEEESSHHHH
T ss_pred CCCEEEECCCchhccccC-CCCHHHHHHHHHHHHhc--ccccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCcHHHH
Confidence 578899999875442222 23899999999988763 2343334445666666666665543 566799999999999
Q ss_pred HHHHHHHhc--------CCCCEEEecCCCccchHHHHhhCCCe---------------EEEeeccCC-CCcccCHHHHHH
Q 014603 123 IEVILTVLA--------RPGANILLPRPGFPYYEARATHSHLE---------------VRHFDLLPA-KGWEVDLDAVEA 178 (422)
Q Consensus 123 ~~~~~~~l~--------~~gd~Vl~~~~~~~~~~~~~~~~g~~---------------~~~~~~~~~-~~~~~d~~~l~~ 178 (422)
++.++++++ .+++.|++.+|+|+++...+...+.. +..++.... .....|++.|++
T Consensus 102 ~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~ 181 (430)
T 3i4j_A 102 TESAVKLARQYHVERGEPGRFKVITRVPSYHGASLGSLAASGMGARRELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRA 181 (430)
T ss_dssp HHHHHHHHHHHHHHTTCTTCCEEEEETTC-------------------------CGGGSCEECCCCTTSCHHHHHTHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCcEEEEEeCCcCCCCcccccccCccccccccCCcCCCCCceEcCCCcccchhhHHHHHHHH
Confidence 999999876 34689999999999876555443321 112221100 001235588888
Q ss_pred hhcC---CceEEEEeCC-CC-Cccc-ccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCcccc-CCCCCeEEEe
Q 014603 179 LADE---NTVALVIINP-GN-PCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF-GSIVPVLTLG 251 (422)
Q Consensus 179 ~~~~---~~~~i~i~~p-~n-ptG~-~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~-~~~~~~i~i~ 251 (422)
.+++ +..++++++| +| ++|. .++.+++++|.++|++||+++|+||+|.++.++|.. ..+..+ +..++ +.
T Consensus 182 ~l~~~~~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~g~~-~~~~~~~~~~~d---i~ 257 (430)
T 3i4j_A 182 LLEREGPETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCGSP-LALSRWSGVTPD---IA 257 (430)
T ss_dssp HHHHHCGGGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SGGGGTTTCCCS---EE
T ss_pred HHHhcCCCCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccch-hhhhhhcCCCCc---EE
Confidence 7762 4566667777 55 7886 678888999999999999999999999988766642 223333 32223 33
Q ss_pred cCccccCCCC-ceeEEEEeeCCCCcccchhHHHHHHhh-----hhhccCcchHHHHHHHHHHhhch-HHHHHHHHHHHHH
Q 014603 252 SISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKSF-----LNISSDPATFIQGAVPQILEKTE-EEFFSKITDILRE 324 (422)
Q Consensus 252 s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~ 324 (422)
++||+++ +| +|+||++++ +++++.+... ...+.+.++++++++.++|+... +...++.++..+.
T Consensus 258 t~sK~l~-~G~~r~G~~~~~--------~~i~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~ 328 (430)
T 3i4j_A 258 VLGKGLA-AGYAPLAGLLAA--------PQVYETVMGGSGAFMHGFTYAGHPVSVAAGLSVLDIVEREDLTGAAKERGAQ 328 (430)
T ss_dssp EECGGGT-TTSSCCEEEEEC--------HHHHHHHHHTTCBCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHH
T ss_pred EEccccc-CCccccEEEEEC--------HHHHHHHhccCCcccccCCCCCCHHHHHHHHHHHHHHHcccHHHHHHHHHHH
Confidence 5789986 49 999999986 5788888763 23445778899999999987533 2334444444555
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccccC----CCCHHHHHHHHHHhcCeEEecCCCCC---CCCeEEEEe
Q 014603 325 TADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEG----INSDMEFALKLAKEESVIVLPGITVG---LKDWLRITF 397 (422)
Q Consensus 325 ~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~~~~~~~~~~l~~~~gi~v~~g~~~~---~~~~iRis~ 397 (422)
.++.+.+.++++|.+. . .+..|.++++.+....... .....++...+ .++||.+.|+..+. ..+++||++
T Consensus 329 ~~~~l~~~~~~~~~~~-~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~~~~~~~~~~~~iRi~~ 405 (430)
T 3i4j_A 329 LLAGLQALQARFPQMM-Q-VRGTGLLLGVVLGDLATGQAFETPGIASRIGAAA-LKRGLITYPGSGAEPNGRGDHLLLGP 405 (430)
T ss_dssp HHHHHHHHHHHCTTEE-E-EEEETTEEEEEEC------------CHHHHHHHH-HHTTEECC-----------CEEEECC
T ss_pred HHHHHHHHHHhCCCeE-E-EEEEEEEEEEEeccccccCCCccHHHHHHHHHHH-HhCCCEEEecccccCCCCCCEEEEEC
Confidence 5555555555566554 2 2334668887775211000 01234566665 46799999974321 157899999
Q ss_pred c--cChHHHHHHHHHHHHHHHHhc
Q 014603 398 A--VEPSALEDGLGRMKAFYDRHA 419 (422)
Q Consensus 398 ~--~~~~~l~~~~~~l~~~~~~~~ 419 (422)
+ .+++++++++++|+++++++.
T Consensus 406 ~~~~t~e~i~~~l~~l~~~l~~~~ 429 (430)
T 3i4j_A 406 PLSITAAEVDGLLALLAGALEDVL 429 (430)
T ss_dssp CTTCCHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHhh
Confidence 8 789999999999999998753
No 119
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=100.00 E-value=6.6e-32 Score=255.02 Aligned_cols=328 Identities=14% Similarity=0.113 Sum_probs=230.4
Q ss_pred CceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCC--CCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHH
Q 014603 46 PLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSST--VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI 123 (422)
Q Consensus 46 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~--~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~ 123 (422)
...+|+-|. .++++++.+++.+++.. .+.+. ....++++.+++++ |.+.+.+.+++++|+++++
T Consensus 19 ~~~~~~pgp------~~~~~~v~~a~~~~~~~----~~~~~~~~~~~~~~~~la~~~----g~~~~~~~i~~~~ggt~al 84 (376)
T 3f0h_A 19 GMLNFTVGP------VMSSEEVRAIGAEQVPY----FRTTEFSSTMLENEKFMLEYA----KAPEGSKAVFMTCSSTGSM 84 (376)
T ss_dssp SCEECSSSS------CCCCHHHHHHHTSCCCC----CSSHHHHHHHHHHHHHHHHHH----TCCTTCEEEEESSCHHHHH
T ss_pred CceeecCCC------CCCcHHHHHHhcCCCCC----CCCHHHHHHHHHHHHHHHHHh----CCCCCceEEEEcCChhHHH
Confidence 345665554 46788999988776532 22221 12344555555555 3232224455699999999
Q ss_pred HHHHHHhcCCCCEEEecCCCccchH--HHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccC
Q 014603 124 EVILTVLARPGANILLPRPGFPYYE--ARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYT 201 (422)
Q Consensus 124 ~~~~~~l~~~gd~Vl~~~~~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~ 201 (422)
+.++++++++||+|++++|.|++.. ..+...|.+++.++.+ .++.+|++.+++.++++++++++++|+||||.++|
T Consensus 85 ~~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~ 162 (376)
T 3f0h_A 85 EAVVMNCFTKKDKVLVIDGGSFGHRFVQLCEIHEIPYVALKLE--HGKKLTKEKLYEYDNQNFTGLLVNVDETSTAVLYD 162 (376)
T ss_dssp HHHHHHHCCTTCCEEEEESSHHHHHHHHHHHHTTCCEEEEECC--TTCCCCHHHHHTTTTSCCCEEEEESEETTTTEECC
T ss_pred HHHHHhccCCCCeEEEEeCChhhHHHHHHHHHcCCceEEEeCC--CCCCCCHHHHHHhhccCceEEEEecccCCcceecC
Confidence 9999999999999999998776643 3466778898888875 34678999999988889999999999999999987
Q ss_pred HHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccC-CCCceeEEEEeeCCCCcccchh
Q 014603 202 YQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWI-VPGWRLGWLVTSDPNGILQDSG 280 (422)
Q Consensus 202 ~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~-~~G~r~G~~~~~~~~~~~~~~~ 280 (422)
+++|.++|+++|+++|+|++|+.+.. ...+...+. .+++.|+||+++ ++| +|+++++ ++
T Consensus 163 ---l~~i~~l~~~~~~~li~D~~~~~~~~----~~~~~~~~~---d~~~~s~~K~l~~~~G--~g~~~~~--------~~ 222 (376)
T 3f0h_A 163 ---TMMIGEFCKKNNMFFVCDCVSAFLAD----PFNMNECGA---DVMITGSQKVLACPPG--ISVIVLA--------PR 222 (376)
T ss_dssp ---HHHHHHHHHHTTCEEEEECTTTTTTS----CCCHHHHTC---SEEEEETTTTTCCCSS--CEEEEEC--------HH
T ss_pred ---HHHHHHHHHHcCCEEEEEcCccccCc----cccccccCc---cEEEecCcccccCCCc--eEEEEEC--------HH
Confidence 88899999999999999999986432 122222222 388899999987 566 6777775 46
Q ss_pred HHHHHHhhhh------------------hccCcchHHHHHHHHHHhhchHH-HHHHHHHHHHHHHHHHHHHhhcCCCCCC
Q 014603 281 IVDSIKSFLN------------------ISSDPATFIQGAVPQILEKTEEE-FFSKITDILRETADICCDRLKEIPCITC 341 (422)
Q Consensus 281 ~~~~~~~~~~------------------~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 341 (422)
+.+++..... ...+++...+.++.++++...+. .+++..++++++++.+.+.|+++ ++.+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~ 301 (376)
T 3f0h_A 223 GVERVEKSKVRTMYFDLKDALKNQERGQTPFTPAVGILLQINERLKEIKKHGGADAEVARIASQAADFRAKIKDL-PFEL 301 (376)
T ss_dssp HHHHHHTCCCCCSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTTS-SEEE
T ss_pred HHHHhhcCCCCceeecHHHHHhhcccCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHc-CCcc
Confidence 6666653210 12244444445666666543333 57888899999999999999987 4542
Q ss_pred CCCCCC-ceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHHHHHHHHH
Q 014603 342 PKKPEG-SMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGRMKAFYDR 417 (422)
Q Consensus 342 ~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~l~~~~~~ 417 (422)
. .+.. ...+.+..+. .+..++...+.+++||.+.+|......+++|++++ ++++++++++++|++++++
T Consensus 302 ~-~~~~~~~~~~~~~~~------~~~~~l~~~l~~~~gi~v~~g~~~~~~~~lRis~~~~~t~e~i~~~~~~l~~~l~~ 373 (376)
T 3f0h_A 302 V-SESPANGVTSVHPTT------ANAYDIFLKLKDEYGIWICPNGGEMKDTIFRVGHIGALTHEDNTTLVNAFKDLQKR 373 (376)
T ss_dssp C-CSSBBTTEEEEEESS------SCHHHHHHHHHHHSSEECEECCGGGTTTCEEEECCSSCCHHHHHHHHHHHHHHHHT
T ss_pred C-ccccCceEEEEeCCC------CCHHHHHHHHHHhCCEEEecCccccCCCEEEEecCCCCCHHHHHHHHHHHHHHHHh
Confidence 2 2222 2222222221 25677777776666999999865445789999996 6899999999999998864
No 120
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=100.00 E-value=1.4e-33 Score=268.42 Aligned_cols=331 Identities=12% Similarity=0.130 Sum_probs=233.4
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCC--CCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFN--CYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT 120 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~--~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~ 120 (422)
++..++||+.+......++ .+|++.+++.+++...... .| +.....++++.+++++ ..+++++++|++
T Consensus 38 ~g~~~ld~~~~~~~~~lg~-~~~~v~~a~~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~--------g~~~v~~~~gg~ 107 (397)
T 2ord_A 38 KGNAYLDFTSGIAVNVLGH-SHPRLVEAIKDQAEKLIHCSNLF-WNRPQMELAELLSKNT--------FGGKVFFANTGT 107 (397)
T ss_dssp TCCEEEESSHHHHTCTTCB-TCHHHHHHHHHHHHHCSCCCTTS-EEHHHHHHHHHHHHTT--------TSCEEEEESSHH
T ss_pred CCCEEEECCccccccccCC-CCHHHHHHHHHHHHhcccCcccc-CCHHHHHHHHHHHHhc--------CCCeEEEeCCHH
Confidence 4677899988732211222 5789999999988653211 12 1122345555555544 257999999999
Q ss_pred HHHHHHHHHhcC------C-CCEEEecCCCccchHH-HHhhCCCe------------EEEeeccCCCCcccCHHHHHHhh
Q 014603 121 QAIEVILTVLAR------P-GANILLPRPGFPYYEA-RATHSHLE------------VRHFDLLPAKGWEVDLDAVEALA 180 (422)
Q Consensus 121 ~a~~~~~~~l~~------~-gd~Vl~~~~~~~~~~~-~~~~~g~~------------~~~~~~~~~~~~~~d~~~l~~~~ 180 (422)
+|+..+++++.. + ++.|++.+|+|++... .+...|.+ ++.++. .|++.|++.+
T Consensus 108 ~a~~~al~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-------~d~~~l~~~l 180 (397)
T 2ord_A 108 EANEAAIKIARKYGKKKSEKKYRILSAHNSFHGRTLGSLTATGQPKYQKPFEPLVPGFEYFEF-------NNVEDLRRKM 180 (397)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCCEEEEEBTCCCCSSHHHHHHSBCHHHHGGGCSCCTTEEEECT-------TCHHHHHHHC
T ss_pred HHHHHHHHHHHHHhhcCCCCCceEEEEcCCcCCCchhhhhccCChhhccccCCCCCCeeEecC-------CCHHHHHHHh
Confidence 999999998763 4 4789999999976543 55666654 444442 2889999999
Q ss_pred cCCceEEEEeCCCCCccc-ccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCC
Q 014603 181 DENTVALVIINPGNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIV 259 (422)
Q Consensus 181 ~~~~~~i~i~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~ 259 (422)
+++++++++++|+||||. +++.+++++|+++|+++|+++|+||+|+++.+.|.. .++..++...+++ |+||.++
T Consensus 181 ~~~~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~-~~~~~~~~~~d~~---s~sK~~~- 255 (397)
T 2ord_A 181 SEDVCAVFLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQCGMGRTGKL-FAYQKYGVVPDVL---TTAKGLG- 255 (397)
T ss_dssp CTTEEEEEECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SHHHHHTCCCSEE---EECGGGG-
T ss_pred hcCeEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccCccc-hhhhhhCCCCCee---eeccccC-
Confidence 888999999999999999 999999999999999999999999999877665532 2223333222322 7799987
Q ss_pred CCceeEEEEeeCCCCcccchhHHHHHHhhh-hhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCC-
Q 014603 260 PGWRLGWLVTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIP- 337 (422)
Q Consensus 260 ~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~- 337 (422)
+|+|+||+++++ ++. .+.... ..+.+++++.+.++.++|+...+ ++..++++++++.+.+.|++++
T Consensus 256 ~G~r~G~~~~~~--------~~~-~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~ 323 (397)
T 2ord_A 256 GGVPIGAVIVNE--------RAN-VLEPGDHGTTFGGNPLACRAGVTVIKELTK---EGFLEEVEEKGNYLMKKLQEMKE 323 (397)
T ss_dssp TTSCCEEEEECS--------TTC-CCCTTSSCCSSTTCHHHHHHHHHHHHHHTS---TTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcCeEEEEEch--------Hhc-ccCCCCcCCCCCCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999874 233 333211 22346688889888888875322 4566778888888888887642
Q ss_pred CCCCC-CCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHHHHHH
Q 014603 338 CITCP-KKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGRMKAF 414 (422)
Q Consensus 338 ~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~l~~~ 414 (422)
++... ..+..|.++++.++.. .+..++...+.+ +||.+.|+. ++++|++++ .+++++++++++|+++
T Consensus 324 ~~~~~~~~~~~g~~~~~~~~~~-----~~~~~l~~~l~~-~gi~v~~~~----~~~iRis~~~~~~~e~i~~~~~~l~~~ 393 (397)
T 2ord_A 324 EYDVVADVRGMGLMIGIQFREE-----VSNREVATKCFE-NKLLVVPAG----NNTIRFLPPLTVEYGEIDLAVETLKKV 393 (397)
T ss_dssp HCTTEEEEEEETTEEEEEECTT-----SCHHHHHHHHHH-TTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred hCCceEEEEEEeEEEEEEECCh-----HHHHHHHHHHHH-CCCEEccCC----CCEEEEECCcCCCHHHHHHHHHHHHHH
Confidence 12211 1233467888887642 146677777654 799999973 578999975 7899999999999998
Q ss_pred HHH
Q 014603 415 YDR 417 (422)
Q Consensus 415 ~~~ 417 (422)
+++
T Consensus 394 l~~ 396 (397)
T 2ord_A 394 LQG 396 (397)
T ss_dssp HHT
T ss_pred Hhh
Confidence 764
No 121
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=100.00 E-value=8.9e-34 Score=270.12 Aligned_cols=338 Identities=13% Similarity=0.075 Sum_probs=221.2
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCC---CCCC----CCCCHHHHHHHHHHHhhcCCCCCCCCCEEE
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFN---CYSS----TVGILPARRAIADYLNRDLPYKLSPDDVYL 115 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~---~y~~----~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~ 115 (422)
+....|.|+.+.+. ++++.+.+++.+.+.....+ .|.. .....++++++++++ ++++++|++
T Consensus 17 ~~~~~iyld~~~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------~~~~~~v~~ 85 (400)
T 3vax_A 17 RGSHMTYLDAAATT-----RVDQRVADIVLHWMTAEFGNAGSRHEYGIRAKRGVERAREYLASTV------SAEPDELIF 85 (400)
T ss_dssp -----CCCCCCCCS-----SSCHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHHHHHHHT------TCCGGGEEE
T ss_pred ccCCcEEecCCCCC-----CCCHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHHHHHc------CCCCCcEEE
Confidence 45667888777644 66789999999887632111 1111 122456777777776 456789999
Q ss_pred ecCHHHHHHHHHHHhc----CCCC-EEEecCCCccchHHHHh---hCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEE
Q 014603 116 TLGCTQAIEVILTVLA----RPGA-NILLPRPGFPYYEARAT---HSHLEVRHFDLLPAKGWEVDLDAVEALADENTVAL 187 (422)
Q Consensus 116 ~~g~~~a~~~~~~~l~----~~gd-~Vl~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i 187 (422)
|+|+++|++.++++++ ++|| +|+++.++|+++...+. ..|.+++.++.++ ++.+|++.|++.++++++++
T Consensus 86 ~~g~t~al~~~~~~l~~~~~~~gd~~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~v 163 (400)
T 3vax_A 86 TSGATESNNIALLGLAPYGERTGRRHIITSAIEHKAVLEPLEHLAGRGFEVDFLTPGP--SGRISVEGVMERLRPDTLLV 163 (400)
T ss_dssp ESCHHHHHHHHHHTTHHHHHHHTCCEEEEETTSCHHHHHHHHHHHTTTCEEEEECCCT--TCCCCHHHHHTTCCTTEEEE
T ss_pred eCCHHHHHHHHHHHHHHhhccCCCCEEEECccccHhHHHHHHHHHhcCCeEEEEccCC--CCCcCHHHHHHhcCCCceEE
Confidence 9999999999999997 8999 99999999988755444 3688999888754 45689999999999899999
Q ss_pred EEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEE
Q 014603 188 VIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWL 267 (422)
Q Consensus 188 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~ 267 (422)
++++|+||||.+++ +++|.++|+++|+++|+|++|+.. .....+..+ . .+++.|+||.++.+| +|++
T Consensus 164 ~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~----~~~~~~~~~-~---d~~~~s~~K~~g~~g--~g~~ 230 (400)
T 3vax_A 164 SLMHVNNETGVIQP---VAELAQQLRATPTYLHVDAAQGYG----KVPGDLTTP-I---DMISISGHKIGAPKG--VGAL 230 (400)
T ss_dssp ECCSBCTTTCBBCC---HHHHHHHHTTSSCEEEEECTTTTT----TSGGGGGSC-C---SEEEEETGGGTSCSS--CEEE
T ss_pred EEECCCCCceeeCc---HHHHHHHHHhcCCEEEEEhhhhcC----CCCcChhhc-C---cEEEEeHHHhCCCCc--eEEE
Confidence 99999999999976 678888999999999999999752 222222222 2 388999999866555 6777
Q ss_pred E-eeCCCCcccchhHHHHHH----hhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC
Q 014603 268 V-TSDPNGILQDSGIVDSIK----SFLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCP 342 (422)
Q Consensus 268 ~-~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 342 (422)
+ +++.........+...+. ......++++...+.++..+++.. ..++++.+++++++++.+.+.|+ .+++.+.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~-~~~~~~~~~~~~~~~~~l~~~L~-~~~~~~~ 308 (400)
T 3vax_A 231 VTRRREEMDDERVPLEPIMFGGGQERKLRPGTLPVPLIMGLAEAAKIF-EAEHAQWQVAAQDLRSRLLAGLA-STSFQVN 308 (400)
T ss_dssp EECBCSSSTTCBCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHH-HHSHHHHHHHHHHHHHHHHHHHT-TTTCEEC
T ss_pred EEecchhccccccccCceecCCCceeeeecCCCCHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHhhC-CCCEEEe
Confidence 7 764210000000111010 011123456667777777777642 34678889999999999999999 7787733
Q ss_pred CCCCC---ceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC-------------------CCeEEEEe-c-
Q 014603 343 KKPEG---SMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL-------------------KDWLRITF-A- 398 (422)
Q Consensus 343 ~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~-------------------~~~iRis~-~- 398 (422)
.+.. +.++++.++.. +..++...+. +||.+.+|..|.. .+++||++ +
T Consensus 309 -~~~~~~~~~~~~~~~~~~------~~~~l~~~L~--~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRls~~~~ 379 (400)
T 3vax_A 309 -GDQDHVVPHILNLSFEDV------DAEAFLVTLK--DLVAVATGSASTSASFTPSHVLRAMGLPEEAASKSLRFSWTPG 379 (400)
T ss_dssp -SCTTSBCTTEEEEECTTC------CHHHHHHHHH--HHHHHTTTTEEEEEEECCHHHHHTTTCCHHHHTSEEEEEEEEC
T ss_pred -CCcccCCCCEEEEEeCCC------CHHHHHHHHh--cCcEEEecccccCCCCCccHHHHHcCCCccccCceEEEEccCC
Confidence 4443 34666666531 5667766664 7999999865532 38999999 6
Q ss_pred -cChHHHHHHHHHHHHHHHH
Q 014603 399 -VEPSALEDGLGRMKAFYDR 417 (422)
Q Consensus 399 -~~~~~l~~~~~~l~~~~~~ 417 (422)
.+++++++++++|++++++
T Consensus 380 ~~t~e~i~~~~~~l~~~~~~ 399 (400)
T 3vax_A 380 QATDLDVEELARGVAKLKPS 399 (400)
T ss_dssp --------------------
T ss_pred CCCHHHHHHHHHHHHHHhcc
Confidence 6789999999999988764
No 122
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=100.00 E-value=1.5e-32 Score=260.85 Aligned_cols=327 Identities=17% Similarity=0.157 Sum_probs=238.0
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCC-CCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFN-CYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ 121 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~-~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 121 (422)
+++.++||+.+.+....+ ..+|.+.+++.+++...... .+.+.....++++.+++++ .++++++++|+++
T Consensus 34 ~g~~~lD~~~~~~~~~lG-~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~--------g~~~v~~~~~gt~ 104 (392)
T 3ruy_A 34 EGNRYMDLLSAYSAVNQG-HRHPKIINALIDQANRVTLTSRAFHSDQLGPWYEKVAKLT--------NKEMVLPMNTGAE 104 (392)
T ss_dssp TCCEEEESSHHHHTCTTC-BTCHHHHHHHHHHHTTCSCCCTTSEETTHHHHHHHHHHHH--------TCSEEEEESSHHH
T ss_pred CCCEEEEcCCChhhhccC-CCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHhc--------CCCEEEEeCcHHH
Confidence 578899999875442122 25799999999988653221 1122345678888888887 3679999999999
Q ss_pred HHHHHHHHhcCC----------CCEEEecCCCccchHHHHhhCCCe-------------EEEeeccCCCCcccCHHHHHH
Q 014603 122 AIEVILTVLARP----------GANILLPRPGFPYYEARATHSHLE-------------VRHFDLLPAKGWEVDLDAVEA 178 (422)
Q Consensus 122 a~~~~~~~l~~~----------gd~Vl~~~~~~~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~d~~~l~~ 178 (422)
|++.+++.+..+ +|+|+++.++|+++...+...+.. +..++. .|++.|++
T Consensus 105 a~~~al~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~ 177 (392)
T 3ruy_A 105 AVETAIKTARRWAYDVKKVEANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVIPY-------GDLEALKA 177 (392)
T ss_dssp HHHHHHHHHHHHHHHTSCCCTTCCEEEEETTCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEECT-------TCHHHHHH
T ss_pred HHHHHHHHHHHhhhhccCCCCCCcEEEEEcCCcCCCCHhhhhccCChhhccccCCCCCCCeeeCc-------ccHHHHHH
Confidence 999999877543 689999999998876555443221 222221 27899999
Q ss_pred hhcCCceEEEEeCCCCCcccccCHHH-HHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCcccc
Q 014603 179 LADENTVALVIINPGNPCGNVYTYQH-LQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRW 257 (422)
Q Consensus 179 ~~~~~~~~i~i~~p~nptG~~~~~~~-l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~ 257 (422)
.++++++++++++|+||||.+++.++ +++|.++|++||+++|+||+|+++.+.|... .....+...++ .++||.+
T Consensus 178 ~l~~~~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~-~~~~~~~~~d~---~~~SK~l 253 (392)
T 3ruy_A 178 AITPNTAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGKVF-ACDWDNVTPDM---YILGKAL 253 (392)
T ss_dssp HCCTTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTTSSSS-GGGGGTCCCSE---EEECGGG
T ss_pred HhccCeEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCccccch-hhhccCCCCCE---EEEchhh
Confidence 99888999999999999999986555 9999999999999999999998776665432 22222322233 3668985
Q ss_pred CCCC-ceeEEEEeeCCCCcccchhHHHHHHhhhh-hccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhc
Q 014603 258 IVPG-WRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKE 335 (422)
Q Consensus 258 ~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 335 (422)
.+| +|+||++++ +++++.+..... .+.+++++.+.++.++++.... ++..++++++++.+.+.|++
T Consensus 254 -~gG~~~~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~L~~ 321 (392)
T 3ruy_A 254 -GGGVFPISCAAAN--------RDILGVFEPGSHGSTFGGNPLACAVSIAALEVLEE---EKLTERSLQLGEKLVGQLKE 321 (392)
T ss_dssp -GTTTSCCEEEEEC--------HHHHTTCCTTSSCCSSTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHTT
T ss_pred -hCChhhhEEEEEC--------HHHHhhhccCCcCCCCCCCHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHHHH
Confidence 347 999999986 456665554432 3457788999999999876321 66788899999999999998
Q ss_pred CC--CCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHHH
Q 014603 336 IP--CITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGRM 411 (422)
Q Consensus 336 ~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~l 411 (422)
+. .+. . .+..|.++++.++. +..++...+ .++||.+.||. .+++|++++ ++++++++++++|
T Consensus 322 ~~~~~~~-~-~~~~g~~~~~~~~~-------~~~~l~~~l-~~~gi~v~~~~----~~~iRi~~~~~~~~~~i~~~~~~l 387 (392)
T 3ruy_A 322 IDNPMIT-E-VRGKGLFIGIELNE-------PARPYCEQL-KAAGLLCKETH----ENVIRIAPPLVISEEDLEWAFQKI 387 (392)
T ss_dssp CCCTTEE-E-EEEETTEEEEEESS-------CSHHHHHHH-HTTTEECCCBT----TTEEEECCCTTCCHHHHHHHHHHH
T ss_pred hcCCCce-E-EEeeeeEEEEEEcc-------hHHHHHHHH-HHCCcEEecCC----CCEEEEECCCCCCHHHHHHHHHHH
Confidence 72 232 2 22235566666653 356676666 46799999875 689999976 7899999999999
Q ss_pred HHHH
Q 014603 412 KAFY 415 (422)
Q Consensus 412 ~~~~ 415 (422)
++++
T Consensus 388 ~~~l 391 (392)
T 3ruy_A 388 KAVL 391 (392)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 9876
No 123
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=100.00 E-value=1.7e-32 Score=264.87 Aligned_cols=358 Identities=15% Similarity=0.094 Sum_probs=236.3
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 122 (422)
+|+.+|||..+.+....+ +.+|.+.+++.+++... ..|....+..+.+..+++++.+..+. ...++|++|+||++|
T Consensus 62 ~G~~ylD~~~~~~~~~lG-h~~p~v~~A~~~~~~~~--~~~~~~~~~~~~~~~la~~l~~~~~~-~~~~~v~~~~sGseA 137 (453)
T 4ffc_A 62 DGNSFIDLGAGIAVTTVG-ASHPAVAAAIADQATHF--THTCFMVTPYEQYVQVAELLNALTPG-DHDKRTALFNSGAEA 137 (453)
T ss_dssp TSCEEEESSHHHHTCTTC-TTCHHHHHHHHHHHHHC--SCCTTTTSCCHHHHHHHHHHHHHSSC-SSCEEEEEESSHHHH
T ss_pred CCCEEEEcCCCcccCcCC-CCCHHHHHHHHHHHHhc--cccccCcCCCHHHHHHHHHHHHhCCC-CCCcEEEEeCcHHHH
Confidence 477789999885442222 34899999999998763 23443334456666666666665431 135799999999999
Q ss_pred HHHHHHHhcC--CCCEEEecCCCccchHHHHhhCCC--------------eEEEeeccC--CCCcccC--------HHHH
Q 014603 123 IEVILTVLAR--PGANILLPRPGFPYYEARATHSHL--------------EVRHFDLLP--AKGWEVD--------LDAV 176 (422)
Q Consensus 123 ~~~~~~~l~~--~gd~Vl~~~~~~~~~~~~~~~~g~--------------~~~~~~~~~--~~~~~~d--------~~~l 176 (422)
++.+++.+.. .++.|++.+++|+++...+...+. .+..++... .+.++.+ .+.|
T Consensus 138 ~~~alk~a~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l 217 (453)
T 4ffc_A 138 VENAIKVARLATGRPAVVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISRI 217 (453)
T ss_dssp HHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCEEEEEcCccCCcchHHHhhcCCCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHHH
Confidence 9999987642 458999999999987655543321 344454421 1112222 3556
Q ss_pred HHhhcCCceEEEEeCCCCCcc--cccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCc
Q 014603 177 EALADENTVALVIINPGNPCG--NVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSIS 254 (422)
Q Consensus 177 ~~~~~~~~~~i~i~~p~nptG--~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~s 254 (422)
++.+.+++.++++++|.|++| ..++.+.+++|.++|++||+++|+||+|.++.+.|.. ......+...+ +.+||
T Consensus 218 ~~~i~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~-~a~~~~~~~pd---i~t~s 293 (453)
T 4ffc_A 218 ETQIGAQSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFARTGAW-FASEHEGIVPD---IVTMA 293 (453)
T ss_dssp HHHTCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-STHHHHTCCCS---EEEEC
T ss_pred HHhcCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCccccc-chhhhcCCCcc---hHhhh
Confidence 666666678888999977776 4557788999999999999999999999987766542 12222232222 44688
Q ss_pred cccCCCCceeEEEEeeCCCCcccchhHHHHHHhhh-hhccCcchHHHHHHHHHHhhch-HHHHHHHHHHHHHHHHHHHHH
Q 014603 255 KRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQGAVPQILEKTE-EEFFSKITDILRETADICCDR 332 (422)
Q Consensus 255 K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~ 332 (422)
|.+++ |+|+||++++ +++++.+.... ..+.+.++++++++.++|+... +...++.++.....++.+.+.
T Consensus 294 K~~~~-G~~~G~~~~~--------~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~l~~~ 364 (453)
T 4ffc_A 294 KGIAG-GMPLSAVTGR--------AELMDAVYAGGLGGTYGGNPVTCAAAVAALGVMRELDLPARARAIEASVTSRLSAL 364 (453)
T ss_dssp GGGGT-TSSCEEEEEE--------HHHHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHH
T ss_pred hhhcC-CcCeEEEEEC--------HHHHhhhcccCcCCCCCcCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 99866 9999999986 46776665443 2345778899999999987533 233344444444444555555
Q ss_pred hhcCCCCCCCCCCCCceEEEEecCcccc--cCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHH
Q 014603 333 LKEIPCITCPKKPEGSMFVMVKLNYSLL--EGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGL 408 (422)
Q Consensus 333 L~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~ 408 (422)
++++|.+. . .+..|.++++.+..... +......++...+ .++||.+.|+..+ .+++|++++ ++++++++++
T Consensus 365 ~~~~~~~~-~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~~~~--~~~iRi~~~~~~t~e~i~~~l 439 (453)
T 4ffc_A 365 AEEVDIIG-E-VRGRGAMLAIEIVKPGTLEPDAALTKSIAAEA-LSQGVLILTCGTF--GNVIRLLPPLVIGDDLLDEGI 439 (453)
T ss_dssp HHHCSSEE-E-EEEETTEEEEEEBCTTSCCBCHHHHHHHHHHH-HHTTEECCEECTT--SCEEEECCCTTCCHHHHHHHH
T ss_pred HhhCCCeE-E-EEeeceEEEEEEecCcccCCCHHHHHHHHHHH-HhCCCEEecCCCC--CCEEEEECCCCCCHHHHHHHH
Confidence 55565443 2 23446788887742100 0000134455554 5669999997654 478999887 6899999999
Q ss_pred HHHHHHHHHhcccC
Q 014603 409 GRMKAFYDRHAKKQ 422 (422)
Q Consensus 409 ~~l~~~~~~~~~~~ 422 (422)
++|++++++..++|
T Consensus 440 ~~l~~~l~~~~~~~ 453 (453)
T 4ffc_A 440 TALSDIIRAKASHQ 453 (453)
T ss_dssp HHHHHHHHHHC---
T ss_pred HHHHHHHHHHHhcC
Confidence 99999999887654
No 124
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=100.00 E-value=2.8e-32 Score=254.72 Aligned_cols=326 Identities=17% Similarity=0.167 Sum_probs=226.7
Q ss_pred CCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHH
Q 014603 45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIE 124 (422)
Q Consensus 45 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~ 124 (422)
..+|+|+.+... .+++.+++++.+.... ...|.+..+..++|++++++++ .+++++++||++++.
T Consensus 3 ~~~i~~~~~~~~-----~p~~~~~~a~~~~~~~--~~~y~~~~~~~~l~~~la~~~g--------~~~~~~~~~gt~a~~ 67 (347)
T 1jg8_A 3 HMMIDLRSDTVT-----KPTEEMRKAMAQAEVG--DDVYGEDPTINELERLAAETFG--------KEAALFVPSGTMGNQ 67 (347)
T ss_dssp --CEECSCGGGC-----CCCHHHHHHHHTCCCC--CGGGTCCHHHHHHHHHHHHHHT--------CSEEEEESCHHHHHH
T ss_pred ceEEEeccccCC-----CCCHHHHHHHhcCCCC--CcccCCChHHHHHHHHHHHHhC--------CceEEEecCcHHHHH
Confidence 567999998744 3567888888765322 2357776788899999999983 246888899999999
Q ss_pred HHHHHhcCCCCEEEecCCCccchH---HHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC------CceEEEEeCCCCC
Q 014603 125 VILTVLARPGANILLPRPGFPYYE---ARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE------NTVALVIINPGNP 195 (422)
Q Consensus 125 ~~~~~l~~~gd~Vl~~~~~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~i~i~~p~np 195 (422)
+++.+++++||+|++++|+|.... ..+...|.+++.+ .. .++.+|++.+++.+++ +++++++++|+||
T Consensus 68 ~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~--~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~np 144 (347)
T 1jg8_A 68 VSIMAHTQRGDEVILEADSHIFWYEVGAMAVLSGVMPHPV-PG--KNGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNR 144 (347)
T ss_dssp HHHHHHCCTTCEEEEETTCHHHHSSTTHHHHHTCCEEEEE-CE--ETTEECHHHHHHHSCCSCTTSCCEEEEEEESSBTT
T ss_pred HHHHHhcCCCCEEEEcCcchhhhccccchhhccCeEEEEe-cC--CCCccCHHHHHHHhccccccccCceEEEEeccccc
Confidence 999999999999999999996532 2566778888777 32 3456899999998875 5889999999999
Q ss_pred c-ccccCHHHHHHHHHHHHHcCcEEEEccccccc--ccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEE-EEeeC
Q 014603 196 C-GNVYTYQHLQKIAETAKKLGIMVIADEVYDHL--AFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGW-LVTSD 271 (422)
Q Consensus 196 t-G~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~--~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~-~~~~~ 271 (422)
| |.++|.+++++|+++|+++|+++|+|++|... .+.+.....+. ... + .++.|+||+++++ +|+ ++.+
T Consensus 145 t~G~~~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~~~-~~~-d--~~~~s~sK~l~~~---~G~~~~~~- 216 (347)
T 1jg8_A 145 SGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYA-GYA-D--SVMFCLSKGLCAP---VGSVVVGD- 216 (347)
T ss_dssp TTSBCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHH-HTC-S--EEEEESSSTTCCS---SCEEEEEC-
T ss_pred cCCccCcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcCCChHHhc-ccc-c--EEEEecccccCCC---ceEEEEcC-
Confidence 9 99999999999999999999999999987531 11122111111 112 2 3445899997643 575 4443
Q ss_pred CCCcccchhHHHHHHhhhhhc-c--CcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCc
Q 014603 272 PNGILQDSGIVDSIKSFLNIS-S--DPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGS 348 (422)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g 348 (422)
+++++++....... + ..+...+.++..+++... +.. ++..++++.+.+.|+++ ++.+...+..+
T Consensus 217 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----~~~-~~~~~~~~~l~~~L~~~-~~~~~~~~~~~ 283 (347)
T 1jg8_A 217 -------RDFIERARKARKMLGGGMRQAGVLAAAGIIALTKMV----DRL-KEDHENARFLALKLKEI-GYSVNPEDVKT 283 (347)
T ss_dssp -------HHHHHHHHHHHHHHTCCCSSTHHHHHHHHHHHHHSS----TTH-HHHHHHHHHHHHHHHHH-TCBCCGGGCCS
T ss_pred -------HHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHH----HHH-HHHHHHHHHHHHHHHhc-CceeccCCCcc
Confidence 45776665543322 1 223344555555554321 111 22334667778888776 66532234556
Q ss_pred eEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHHHHHHHHHh
Q 014603 349 MFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~l~~~~~~~ 418 (422)
.++|+.++.. + .+..++...+. ++||.+.++. .+++|++++ ++++++++++++|+++++++
T Consensus 284 ~~~~~~~~~~---~-~~~~~~~~~l~-~~gi~v~~~~----~~~iRl~~~~~~~~e~i~~~~~~l~~~l~~~ 346 (347)
T 1jg8_A 284 NMVILRTDNL---K-VNAHGFIEALR-NSGVLANAVS----DTEIRLVTHKDVSRNDIEEALNIFEKLFRKF 346 (347)
T ss_dssp SEEEEECTTS---S-SCHHHHHHHHH-HHTEECEEEE----TTEEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEcccc---c-CCHHHHHHHHH-HCCCEEecCC----CCeEEEEeCCCCCHHHHHHHHHHHHHHHHhc
Confidence 7888888631 1 14677777774 5699998853 478999986 68999999999999988654
No 125
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=100.00 E-value=9.7e-33 Score=265.69 Aligned_cols=351 Identities=14% Similarity=0.080 Sum_probs=231.1
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 122 (422)
++..++||..+......++ .+|++.+++.+++..... +. ..+..+.+..+++.+.+.+ +.++++|++|+|+++|
T Consensus 41 ~g~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~--~~-~~~~~~~~~~l~~~la~~~--~~~~~~v~~~~gg~ea 114 (433)
T 1zod_A 41 DGRAILDFTSGQMSAVLGH-CHPEIVSVIGEYAGKLDH--LF-SEMLSRPVVDLATRLANIT--PPGLDRALLLSTGAES 114 (433)
T ss_dssp TCCEEEETTHHHHTCTTCB-TCHHHHHHHHHHHHHCCC--CC-TTCCCHHHHHHHHHHHHHS--CTTCCEEEEESCHHHH
T ss_pred CCCEEEEcccchhccccCC-CCHHHHHHHHHHHHhCcc--cc-cccCCHHHHHHHHHHHHhC--CCCcCEEEEeCchHHH
Confidence 4677899977764322232 578999999999875321 11 1122233444444444433 3457899999999999
Q ss_pred HHHHHHHhc--CCCCEEEecCCCccchHHHHhhC------------CCeEEEeeccC--CCCc--------ccCHHHHHH
Q 014603 123 IEVILTVLA--RPGANILLPRPGFPYYEARATHS------------HLEVRHFDLLP--AKGW--------EVDLDAVEA 178 (422)
Q Consensus 123 ~~~~~~~l~--~~gd~Vl~~~~~~~~~~~~~~~~------------g~~~~~~~~~~--~~~~--------~~d~~~l~~ 178 (422)
++.+++.+. ..+++|++.+|+|+++...+... ..++..++... ...+ .+|++.|++
T Consensus 115 ~~~a~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~ 194 (433)
T 1zod_A 115 NEAAIRMAKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFD 194 (433)
T ss_dssp HHHHHHHHHHHHTCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCeEEEECCCcCCCChhHHhhcCCccccccCCCCCCceEecCCcccccccCCchhhhHHHHHHHHHH
Confidence 999998653 23589999999998865543321 11334443321 1112 236889988
Q ss_pred hhcC---CceEEEEeCC-CCCccc-ccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecC
Q 014603 179 LADE---NTVALVIINP-GNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSI 253 (422)
Q Consensus 179 ~~~~---~~~~i~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~ 253 (422)
.+++ +..++++++| +||||. .++.+++++|.++|++||+++|+||+|+++.+.|.. ..+...+...+ +.|+
T Consensus 195 ~l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~g~~-~~~~~~~~~~d---i~s~ 270 (433)
T 1zod_A 195 LIDRQSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTM-FACQRDGVTPD---ILTL 270 (433)
T ss_dssp HHHHHCCSCEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-STHHHHTCCCS---EEEE
T ss_pred HHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCchH-hHHhhcCCCCC---EEEe
Confidence 8763 3445666788 588996 577889999999999999999999999987665532 12222222222 3478
Q ss_pred ccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhh-h--hccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHH
Q 014603 254 SKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL-N--ISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICC 330 (422)
Q Consensus 254 sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~ 330 (422)
||.|++ |+|+||++++ +++++.+.... . .+.+.+++++.++.++++...+ +...++++++++.+.
T Consensus 271 sK~~~~-G~~ig~~~~~--------~~~~~~~~~~~~~~~~t~~~~~~~~~a~~aal~~~~~---~~~~~~~~~~~~~l~ 338 (433)
T 1zod_A 271 SKTLGA-GLPLAAIVTS--------AAIEERAHELGYLFYTTHVSDPLPAAVGLRVLDVVQR---DGLVARANVMGDRLR 338 (433)
T ss_dssp CHHHHT-TSSCEEEEEC--------HHHHHHHHHTTCCCCCTTTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHH
T ss_pred cccccC-CCCeeEEEEh--------HHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHH
Confidence 999875 9999999986 46777776532 1 3346688899888888875322 234455666666666
Q ss_pred HHhhc----CCCCCCCCCCCCceEEEEecCcccc---cCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cCh
Q 014603 331 DRLKE----IPCITCPKKPEGSMFVMVKLNYSLL---EGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEP 401 (422)
Q Consensus 331 ~~L~~----~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~ 401 (422)
+.|++ ++.+. . .+..|.++|+.++.... .......++...++ ++||.+.||..|+.++++||+++ +++
T Consensus 339 ~~l~~l~~~~~~~~-~-~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~~~~~~lRi~~~~~~t~ 415 (433)
T 1zod_A 339 RGLLDLMERFDCIG-D-VRGRGLLLGVEIVKDRRTKEPADGLGAKITRECM-NLGLSMNIVQLPGMGGVFRIAPPLTVSE 415 (433)
T ss_dssp HHHHHHHHHCTTEE-E-EEEETTEEEEEEEEETTTTEECTTHHHHHHHHHH-HTTEECCEECCTTSCCEEEECCCTTCCH
T ss_pred HHHHHHHHhCCCeE-E-EEEEEEEEEEEEecCccccCCChHHHHHHHHHHH-HCCCeEeccCCCCCCCEEEEECCcCCCH
Confidence 66655 34332 2 23346788887753100 00012455666664 67999999887655689999875 789
Q ss_pred HHHHHHHHHHHHHHHHh
Q 014603 402 SALEDGLGRMKAFYDRH 418 (422)
Q Consensus 402 ~~l~~~~~~l~~~~~~~ 418 (422)
+++++++++|+++++++
T Consensus 416 ~~i~~~l~~l~~~l~~~ 432 (433)
T 1zod_A 416 DEIDLGLSLLGQAIERA 432 (433)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999998764
No 126
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=100.00 E-value=8.5e-32 Score=258.74 Aligned_cols=339 Identities=15% Similarity=0.117 Sum_probs=233.9
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCC---CCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARF---NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGC 119 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~---~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~ 119 (422)
++..++||..+.+....+ +.+|++.+++.+++..... ..|+. ....++++++++++ ++++++|++|+|+
T Consensus 41 ~g~~ylD~~~~~~~~~lg-~~~p~v~~a~~~~~~~~~~~~~~~~~~-~~~~~l~~~la~~~------~~~~~~v~~~~gg 112 (429)
T 1s0a_A 41 DGRRLVDGMSSWWAAIHG-YNHPQLNAAMKSQIDAMSHVMFGGITH-APAIELCRKLVAMT------PQPLECVFLADSG 112 (429)
T ss_dssp TSCEEEESSTTTTTCTTC-BSCHHHHHHHHHHHHHCSCCCCSSEEC-HHHHHHHHHHHHHS------CTTCCEEEEESSH
T ss_pred CCCEEEEcCccHhhccCC-CCCHHHHHHHHHHHHhcccccccccCC-HHHHHHHHHHHHhC------CCCCCEEEEeCCH
Confidence 577789998887543233 2579999999999865322 13322 22356666777666 4578899999999
Q ss_pred HHHHHHHHHHhc---C----CCCEEEecCCCccchHHHHhhC-C-------------CeEEEeeccC---CCCc-ccCHH
Q 014603 120 TQAIEVILTVLA---R----PGANILLPRPGFPYYEARATHS-H-------------LEVRHFDLLP---AKGW-EVDLD 174 (422)
Q Consensus 120 ~~a~~~~~~~l~---~----~gd~Vl~~~~~~~~~~~~~~~~-g-------------~~~~~~~~~~---~~~~-~~d~~ 174 (422)
++|++.+++++. + +||+|++.+|+|+++...+... + .++..++... .+.+ ..|++
T Consensus 113 tea~~~ai~~~~~~~~~~g~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 192 (429)
T 1s0a_A 113 SVAVEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMV 192 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGH
T ss_pred HHHHHHHHHHHHHHhcccCCCCCeEEEECCCCCCCchhhhhhcCCchhhcccccCCCCCceEeCCCcccccccchHHHHH
Confidence 999999988653 2 6899999999998764433221 1 1344444421 1123 47899
Q ss_pred HHHHhhcC--CceEEEEeCC--CCCccc-ccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEE
Q 014603 175 AVEALADE--NTVALVIINP--GNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLT 249 (422)
Q Consensus 175 ~l~~~~~~--~~~~i~i~~p--~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~ 249 (422)
.|++.+++ ...++++++| +||||. .++.+++++|.++|+++|+++|+||+|.++.+.|... .+...+...++
T Consensus 193 ~l~~~l~~~~~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~g~~~-~~~~~~~~~d~-- 269 (429)
T 1s0a_A 193 GFARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLF-ACEHAEIAPDI-- 269 (429)
T ss_dssp HHHHHHHHHTTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGGTCCCSE--
T ss_pred HHHHHHHhCCCCEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCcccchHH-HhhhcCCCCCE--
Confidence 99988863 3344566777 589996 5678889999999999999999999998766554321 22222222232
Q ss_pred EecCccccCCCC-ceeEEEEeeCCCCcccchhHHHHHHhh------hhhccCcchHHHHHHHHHHhhchHHHHHHHHHHH
Q 014603 250 LGSISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKSF------LNISSDPATFIQGAVPQILEKTEEEFFSKITDIL 322 (422)
Q Consensus 250 i~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~ 322 (422)
.|+||.++ +| +|+||++++ +++++.+... ...+.+++++++.++.++++...+ ++..+++
T Consensus 270 -~t~sK~l~-~G~~~iG~~~~~--------~~~~~~l~~~~~~~~~~~~t~~~n~~~~~a~~aal~~~~~---~~~~~~~ 336 (429)
T 1s0a_A 270 -LCLGKALT-GGTMTLSATLTT--------REVAETISNGEAGCFMHGPTFMGNPLACAAANASLAILES---GDWQQQV 336 (429)
T ss_dssp -EEECGGGG-TSSSCCEEEEEC--------HHHHHHHHTSTTSSCSCCCTTTTCHHHHHHHHHHHHHHHT---CHHHHHH
T ss_pred -EEeccccc-CCCccceEEEeC--------HHHHHHhhcCCCcccccCCCCCCCHHHHHHHHHHHHHHHh---CCHHHHH
Confidence 36889976 58 999999986 4677777653 122346688899998888875322 2355677
Q ss_pred HHHHHHHHHHhhcC---CCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec-
Q 014603 323 RETADICCDRLKEI---PCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA- 398 (422)
Q Consensus 323 ~~~~~~l~~~L~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~- 398 (422)
+++++.+.+.|+++ |++. . .+..|.++|+.++.. .+..++...+. ++||.+.++ .+++||+++
T Consensus 337 ~~~~~~l~~~L~~l~~~~~~~-~-~~~~g~~~~~~~~~~-----~~~~~l~~~l~-~~Gi~v~~~-----~~~iRis~~~ 403 (429)
T 1s0a_A 337 ADIEVQLREQLAPARDAEMVA-D-VRVLGAIGVVETTHP-----VNMAALQKFFV-EQGVWIRPF-----GKLIYLMPPY 403 (429)
T ss_dssp HHHHHHHHHHHGGGGGCTTEE-E-EEEETTEEEEEESSC-----BCHHHHHHHHH-HTTEECCCB-----TTEEEECCCT
T ss_pred HHHHHHHHHHHHHHhcCCCEE-E-EEEeeEEEEEEECCc-----ccHHHHHHHHH-HCCCEEecc-----CCEEEEECCC
Confidence 77888888888775 4433 1 123466888887642 14566767665 569999874 378999976
Q ss_pred -cChHHHHHHHHHHHHHHHHh
Q 014603 399 -VEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 399 -~~~~~l~~~~~~l~~~~~~~ 418 (422)
++++++++++++|+++++++
T Consensus 404 ~~t~e~i~~~~~~l~~~~~~~ 424 (429)
T 1s0a_A 404 IILPQQLQRLTAAVNRAVQDE 424 (429)
T ss_dssp TCCHHHHHHHHHHHHHHTSSG
T ss_pred CCCHHHHHHHHHHHHHHHHhh
Confidence 78999999999999987654
No 127
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=100.00 E-value=6.4e-32 Score=258.55 Aligned_cols=335 Identities=16% Similarity=0.148 Sum_probs=232.3
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 122 (422)
++..++||+.|......++ .+|.+.+++.+++..... +.. ....++++.+++.+.+..| .+++++++|+++|
T Consensus 55 ~g~~~lD~~~~~~~~~lG~-~~p~v~~ai~~~~~~~~~--~~~-~~~~~~~~~l~~~la~~~g----~~~v~~~~ggteA 126 (420)
T 2pb2_A 55 QGKEYIDFAGGIAVTALGH-CHPALVEALKSQGETLWH--TSN-VFTNEPALRLGRKLIDATF----AERVLFMNSGTEA 126 (420)
T ss_dssp TCCEEEESSHHHHTCTTCB-TCHHHHHHHHHHHTTCCC--CCT-TSCCHHHHHHHHHHHHHSS----CSEEEEESSHHHH
T ss_pred CCCEEEEccccccccccCC-CCHHHHHHHHHHHHhccc--ccC-ccCCHHHHHHHHHHHhhCC----CCeEEEeCCHHHH
Confidence 5778999988742211222 678999999999875321 111 1123445555555544333 5799999999999
Q ss_pred HHHHHHHhcC-------CC-CEEEecCCCccchHHH-HhhCCCe------------EEEeeccCCCCcccCHHHHHHhhc
Q 014603 123 IEVILTVLAR-------PG-ANILLPRPGFPYYEAR-ATHSHLE------------VRHFDLLPAKGWEVDLDAVEALAD 181 (422)
Q Consensus 123 ~~~~~~~l~~-------~g-d~Vl~~~~~~~~~~~~-~~~~g~~------------~~~~~~~~~~~~~~d~~~l~~~~~ 181 (422)
++.+++++.. +| ++|++++|+|+++... ....|.+ +..++. .|++.|++.++
T Consensus 127 ~~~al~~~~~~~~~~~~~g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-------~d~~~le~~i~ 199 (420)
T 2pb2_A 127 NETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPF-------NDLHAVKAVMD 199 (420)
T ss_dssp HHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCHHHHTTSSSCCSCEEEECT-------TCHHHHHHHCC
T ss_pred HHHHHHHHHHHhhhccCCCCCEEEEEeCCcCCcCHHHHHhcCCccccccCCCCCCCeEEecC-------CCHHHHHHHhc
Confidence 9999998765 67 5999999999876443 3344432 333332 28899999998
Q ss_pred CCceEEEEeCCCCCccc-ccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCC
Q 014603 182 ENTVALVIINPGNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVP 260 (422)
Q Consensus 182 ~~~~~i~i~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~ 260 (422)
+++++++++.++|++|. +++.+++++|.++|+++|+++|+||+|.++.++|... .+...+..++++ |+||.++ +
T Consensus 200 ~~~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~g~~~-~~~~~~~~~dii---t~sK~l~-~ 274 (420)
T 2pb2_A 200 DHTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDLF-AYMHYGVTPDIL---TSAKALG-G 274 (420)
T ss_dssp TTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-HHHHHTCCCSEE---EECGGGG-T
T ss_pred cCceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccCCcHH-HHHhcCCCCCeE---Eeccccc-C
Confidence 88888887777888884 6899999999999999999999999998876665422 122223223333 6799987 8
Q ss_pred CceeEEEEeeCCCCcccchhHHHHHHhhh-hhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcC---
Q 014603 261 GWRLGWLVTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEI--- 336 (422)
Q Consensus 261 G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--- 336 (422)
|+|+||++++ +++++.+.... ..+.++++++++++.++|+...+ ++..++++++++++.+.|+++
T Consensus 275 G~~iG~~~~~--------~~l~~~l~~~~~~~t~~~~~~~~aa~~a~L~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~ 343 (420)
T 2pb2_A 275 GFPVSAMLTT--------QEIASAFHVGSHGSTYGGNPLACAVAGAAFDIINT---PEVLQGIHTKRQQFVQHLQAIDEQ 343 (420)
T ss_dssp TSCCEEEEEC--------HHHHTTCC----CCEECCCHHHHHHHHHHHHHHSS---HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEEh--------HHHHHhhcCCCcCcccCcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999986 34555554422 23346788999998888875332 345667777777777777654
Q ss_pred -CCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHHHHH
Q 014603 337 -PCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGRMKA 413 (422)
Q Consensus 337 -~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~l~~ 413 (422)
|.+. . .+..|.++++.++... ..+..++...+. ++||.+.|+. ++++|++++ ++++++++++++|++
T Consensus 344 ~~~~~-~-~~~~g~~~~v~~~~~~---~~~~~~l~~~l~-~~Gi~v~~~~----~~~iRl~~~~~~t~eei~~~~~~l~~ 413 (420)
T 2pb2_A 344 FDIFS-D-IRGMGLLIGAELKPKY---KGRARDFLYAGA-EAGVMVLNAG----ADVMRFAPSLVVEEADIHEGMQRFAQ 413 (420)
T ss_dssp HCCEE-E-EEEETTEEEEEECGGG---TTCHHHHHHHHH-HTTEECEESS----TTEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred CCCeE-E-EEecceEEEEEECCCc---hHHHHHHHHHHH-HCCCEEEeCC----CCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 3322 1 1234678888876421 013566766665 4799999874 578999975 789999999999999
Q ss_pred HHHHh
Q 014603 414 FYDRH 418 (422)
Q Consensus 414 ~~~~~ 418 (422)
+++++
T Consensus 414 ~l~~~ 418 (420)
T 2pb2_A 414 AVGKV 418 (420)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98765
No 128
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=100.00 E-value=9.1e-32 Score=259.33 Aligned_cols=348 Identities=14% Similarity=0.096 Sum_probs=230.6
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCC-CCEEEecCHHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSP-DDVYLTLGCTQ 121 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~-~~i~~~~g~~~ 121 (422)
+++.++||+.+.+....++ .+|.+.+++.+++... ..|....+..++++.+++++.+.++ ... +++++++|+++
T Consensus 41 ~g~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~--~~~~~~~~~~~~~~~l~~~la~~~~--~~~~~~v~~~~ggse 115 (439)
T 3dxv_A 41 NGRELIDLSGAWGAASLGY-GHPAIVAAVSAAAANP--AGATILSASNAPAVTLAERLLASFP--GEGTHKIWFGHSGSD 115 (439)
T ss_dssp TSCEEEESSTTTTTCTTCB-SCHHHHHHHHHHHHSC--SCSCSSSSEEHHHHHHHHHHHHTTT--CTTTEEEEEESSHHH
T ss_pred CCCEEEECCCchhhccCCC-CCHHHHHHHHHHHHhc--cCccccccCCHHHHHHHHHHHHhCC--CCCCCEEEEeCCHHH
Confidence 5788999999987532332 6899999999998764 2454445566777777777776553 234 69999999999
Q ss_pred HHHHHHHHh--cCCCCEEEecCCCccchHHHHhhCCCe-E--------------EEeeccCCCCccc-----CHHHHHHh
Q 014603 122 AIEVILTVL--ARPGANILLPRPGFPYYEARATHSHLE-V--------------RHFDLLPAKGWEV-----DLDAVEAL 179 (422)
Q Consensus 122 a~~~~~~~l--~~~gd~Vl~~~~~~~~~~~~~~~~g~~-~--------------~~~~~~~~~~~~~-----d~~~l~~~ 179 (422)
|++.+++++ ..+++.|++.++.|+++...+...+.. . ..++.. ..+.. |++.|++.
T Consensus 116 a~~~al~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~~le~~ 193 (439)
T 3dxv_A 116 ANEAAYRAIVKATGRSGVIAFAGAYHGCTVGSMAFSGHSVQADAAKADGLILLPYPDPYR--PYRNDPTGDAILTLLTEK 193 (439)
T ss_dssp HHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHCC-------------CEEEECCCCSSS--CBTTBTTSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCEEEEECCCCCCCcHHHHhhcCCCchhhccccCCCCCCcEEcCCC--cccccccHHHHHHHHHHH
Confidence 999999885 235678999999998776555443322 1 122221 11111 68899998
Q ss_pred h----cCCceEEEEeCCCCCccccc-CHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCc
Q 014603 180 A----DENTVALVIINPGNPCGNVY-TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSIS 254 (422)
Q Consensus 180 ~----~~~~~~i~i~~p~nptG~~~-~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~s 254 (422)
+ .+++++++++.++|++|.+. +.+.+++|.++|++||+++|+||+|+++.+.|.. ......+...+++ |+|
T Consensus 194 l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g~~g~~-~~~~~~~~~~di~---s~s 269 (439)
T 3dxv_A 194 LAAVPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLARSGRL-HCFEHEGFVPDIL---VLG 269 (439)
T ss_dssp HHTSCTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTTTTSSS-SGGGGTTCCCSEE---EEC
T ss_pred HHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchh-hHHHhcCCCCCEE---EEc
Confidence 8 34555565555577788765 5555999999999999999999999977665542 1222333222332 889
Q ss_pred cccCCCCceeEEEEeeCCCCcccchhHHHHHHhhh-hhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHh
Q 014603 255 KRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRL 333 (422)
Q Consensus 255 K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L 333 (422)
|.++ +|+|+||++++ +++++.+.... ..+. .++++++++.++|+...+ ++..++++++.+.+++.|
T Consensus 270 K~~~-~G~riG~~~~~--------~~~~~~~~~~~~~~t~-~~~~~~~aa~aal~~~~~---~~~~~~~~~~~~~~~~~l 336 (439)
T 3dxv_A 270 KGLG-GGLPLSAVIAP--------AEILDCASAFAMQTLH-GNPISAAAGLAVLETIDR---DDLPAMAERKGRLLRDGL 336 (439)
T ss_dssp GGGG-TTSCCEEEEEE--------HHHHTSCSSSSCCTTT-TCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHH
T ss_pred chhc-CCcceEEEEEC--------HHHHhhhcCCCcCCCc-ccHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHH
Confidence 9987 59999999986 46666665442 2344 788889888888875332 233444444444444444
Q ss_pred h----cCCCCCCCCCCCCceEEEEecCcccc---cCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHH
Q 014603 334 K----EIPCITCPKKPEGSMFVMVKLNYSLL---EGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSAL 404 (422)
Q Consensus 334 ~----~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l 404 (422)
+ .++.+. . .+..|.++++.+..... +......++...++ ++||.+.|+..+ .+++||+++ ++++++
T Consensus 337 ~~~~~~~~~~~-~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~--~~~iRi~~~~~~t~e~i 411 (439)
T 3dxv_A 337 SELAKRHPLIG-D-IRGRGLACGMELVCDRQSREPARAETAKLIYRAY-QLGLVVYYVGMN--GNVLEFTPPLTITETDI 411 (439)
T ss_dssp HHHHHHCTTEE-E-EEEETTEEEEEEEEETTTTEECHHHHHHHHHHHH-HHTEECEEESTT--SCEEEECCCTTCCHHHH
T ss_pred HHHHHhCCCeE-E-EEEEEEEEEEEEecCccccCCCHHHHHHHHHHHH-HCCcEEeecCCC--CCEEEEECCCCCCHHHH
Confidence 4 444443 2 33446777777621100 00012445666654 459999998532 489999876 689999
Q ss_pred HHHHHHHHHHHHHhc
Q 014603 405 EDGLGRMKAFYDRHA 419 (422)
Q Consensus 405 ~~~~~~l~~~~~~~~ 419 (422)
++++++|+++++++.
T Consensus 412 ~~~l~~l~~~l~~~~ 426 (439)
T 3dxv_A 412 HKALDLLDRAFSELS 426 (439)
T ss_dssp HHHHHHHHHHHHTGG
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999998763
No 129
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=100.00 E-value=2.9e-31 Score=249.92 Aligned_cols=331 Identities=15% Similarity=0.072 Sum_probs=222.9
Q ss_pred CC-CceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHH
Q 014603 44 TR-PLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (422)
Q Consensus 44 ~~-~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 122 (422)
|. +++|++.+.+. .++++++++++.. ...| ..+++.+++.+.+.+|.. +++++++++|++++
T Consensus 26 g~~~v~~~~~~~~~----~~~~~~v~~a~~~------~~~~------~~~~~~~~~~~a~~~g~~-~~~~~~~~~ggt~a 88 (374)
T 2aeu_A 26 GRDALYDLSGLSGG----FLIDEKDKALLNT------YIGS------SYFAEKVNEYGLKHLGGD-ENDKCVGFNRTSSA 88 (374)
T ss_dssp CGGGCEECSSCCCC----CCCCHHHHHHHTS------TTHH------HHHHHHHHHHHHHHHTCC-TTEEEEEESSHHHH
T ss_pred CccceeeecccCCC----CCCCHHHHHHHHH------hcCc------hHHHHHHHHHHHHHhCCC-CcceEEEEcChHHH
Confidence 55 78999988744 4788999998861 1111 233444554444333322 34789999999999
Q ss_pred HHHHHHHhcCCCCEEEecCCCccchHH---HHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceE-EEEeCCCCCccc
Q 014603 123 IEVILTVLARPGANILLPRPGFPYYEA---RATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVA-LVIINPGNPCGN 198 (422)
Q Consensus 123 ~~~~~~~l~~~gd~Vl~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~-i~i~~p~nptG~ 198 (422)
+..++.++ +||+|+++.|+|+++.. .++..|.+++.+ .|++.+++. ++++++ +++++|+||||.
T Consensus 89 ~~~~~~~~--~gd~Vl~~~~~y~~~~~~~~~~~~~g~~~~~v---------~d~~~l~~~-~~~~~~~v~~~~p~nptG~ 156 (374)
T 2aeu_A 89 ILATILAL--KPKKVIHYLPELPGHPSIERSCKIVNAKYFES---------DKVGEILNK-IDKDTLVIITGSTMDLKVI 156 (374)
T ss_dssp HHHHHHHH--CCSEEEEECSSSSCCTHHHHHHHHTTCEEEEE---------SCHHHHHTT-CCTTEEEEEECBCTTSCBC
T ss_pred HHHHHHhC--CCCEEEEecCCCCccHHHHHHHHHcCcEEEEe---------CCHHHHHhc-CCCccEEEEEccCCCCCCC
Confidence 99999988 99999999998876433 566788888766 278899888 778899 889999999996
Q ss_pred ccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccc
Q 014603 199 VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQD 278 (422)
Q Consensus 199 ~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~ 278 (422)
+..++++|.++|+++|+++|+|++|+.+.............+. .++++|+||++ +|+|+||++++
T Consensus 157 --~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~---di~~~S~sK~l--~g~~~G~~~~~-------- 221 (374)
T 2aeu_A 157 --ELENFKKVINTAKNKEAIVFVDDASGARVRLLFNQPPALKLGA---DLVVTSTDKLM--EGPRGGLLAGK-------- 221 (374)
T ss_dssp --CHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHTTCCCHHHHTC---SEEEEETTSSS--SSCSCEEEEEE--------
T ss_pred --CcccHHHHHHHHHHcCCEEEEECCcccccccccccCCccccCC---cEEEecCcccc--cCcceEEEEEC--------
Confidence 5589999999999999999999999765310000000112222 38899999984 46899999986
Q ss_pred hhHHHHHHhhhhh-ccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHH----HHHHHHHhhcC---CCCCCCCCCCCceE
Q 014603 279 SGIVDSIKSFLNI-SSDPATFIQGAVPQILEKTEEEFFSKITDILRET----ADICCDRLKEI---PCITCPKKPEGSMF 350 (422)
Q Consensus 279 ~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~----~~~l~~~L~~~---~~~~~~~~~~~g~~ 350 (422)
+++++++...... ..+++++.+.++.++++......+++..+..+.. ++.+.+.|..+ +++.+...|.+.++
T Consensus 222 ~~~~~~l~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~g~~~ 301 (374)
T 2aeu_A 222 KELVDKIYIEGTKFGLEAQPPLLAGIYRALKNFNLERIRKAFERAKNFDLSKIEKLNKELKAIDDNINIVYERTPTGFVI 301 (374)
T ss_dssp HHHHHHHHHHHHTTTCBCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHTTTCTTEEEEEEECSSEEEE
T ss_pred HHHHHHHHHhhccccCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcceeeCCceEEE
Confidence 5788888766543 3356788888888888764322233333333333 45666666554 24442224554444
Q ss_pred EEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCC-CCCeEEEEecc-C--hHHHHHHHHHHHHHHHHhcc
Q 014603 351 VMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVG-LKDWLRITFAV-E--PSALEDGLGRMKAFYDRHAK 420 (422)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~-~~~~iRis~~~-~--~~~l~~~~~~l~~~~~~~~~ 420 (422)
.|..++... ...++.++...+++++||.+.||..|. ..+++||+++. + +.+++++++.|+++++++.+
T Consensus 302 ~~~~~~~~~--~~~~~~~~~~~ll~~~gV~v~~g~~~~~~~~~lRi~~~~~~~~~~~l~~l~~~l~~~l~~~~~ 373 (374)
T 2aeu_A 302 KRVYKDDTI--NIKKLIEIGFNLLKNYGIITITVAGMPGASKSLRIDLTSRDAERIDDNYIIKAIVESIKMAFK 373 (374)
T ss_dssp EEEESSHHH--HHHHHHHHHHHHHHHHCEECSTTSSSCSSCCSEEEETTSGGGGGSCHHHHHHHHHHHHHHHTC
T ss_pred Eeecccccc--cccchHHHHHHHHHhCCEEEecCCCCCCCCCeEEEEcCCchHHHHHHHHHHHHHHHHHHHHhc
Confidence 554443110 000112255567777899999997763 35799999973 2 33588888988888887653
No 130
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=100.00 E-value=1.2e-31 Score=254.95 Aligned_cols=333 Identities=13% Similarity=0.132 Sum_probs=229.5
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCC--CCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYS--STVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT 120 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~--~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~ 120 (422)
+++.++||+.+.+....+ ..+|++.+++.+++..... .|. +.....++++++++++ .++++++++||+
T Consensus 34 ~g~~~lD~~~~~~~~~lG-~~~p~v~~a~~~~~~~~~~-~~~~~~~~~~~~l~~~la~~~--------~~~~v~~~~gg~ 103 (395)
T 3nx3_A 34 KAKKYLDFSSGIGVCALG-YNHAKFNAKIKAQVDKLLH-TSNLYYNENIAAAAKNLAKAS--------ALERVFFTNSGT 103 (395)
T ss_dssp TCCEEEESSHHHHTCTTC-BSCHHHHHHHHHHHTTCSC-CCTTSBCHHHHHHHHHHHHHH--------TCSEEEEESSHH
T ss_pred CCCEEEECCCcHHhccCC-CCCHHHHHHHHHHHHhccc-cccccCCHHHHHHHHHHHHhc--------CCCeEEEeCCHH
Confidence 578899999886442222 2579999999999875321 121 1222344555555554 257999999999
Q ss_pred HHHHHHHHHhc-------CCCCEEEecCCCccchHHHHhhCC-------------CeEEEeeccCCCCcccCHHHHHHhh
Q 014603 121 QAIEVILTVLA-------RPGANILLPRPGFPYYEARATHSH-------------LEVRHFDLLPAKGWEVDLDAVEALA 180 (422)
Q Consensus 121 ~a~~~~~~~l~-------~~gd~Vl~~~~~~~~~~~~~~~~g-------------~~~~~~~~~~~~~~~~d~~~l~~~~ 180 (422)
+|++.+++.+. .++++|++.+|+|+++...+...+ .++..++. .|++.|++.+
T Consensus 104 ea~~~al~~~~~~~~~~g~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l 176 (395)
T 3nx3_A 104 ESIEGAMKTARKYAFNKGVKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFAKY-------NDISSVEKLV 176 (395)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEECT-------TCHHHHHTTC
T ss_pred HHHHHHHHHHHHHhhccCCCCCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEeCC-------CCHHHHHHhc
Confidence 99999998775 357999999999998754444332 23333321 2789999999
Q ss_pred cCCceEEEEeCCCCCcccc-cCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCC
Q 014603 181 DENTVALVIINPGNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIV 259 (422)
Q Consensus 181 ~~~~~~i~i~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~ 259 (422)
+++++++++..++|++|.. ++.+++++|.++|++||+++|+||+|.++.+.|... .....+.. ..+.|+||.+++
T Consensus 177 ~~~~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~-~~~~~~~~---~d~~t~sK~~~~ 252 (395)
T 3nx3_A 177 NEKTCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSGKFF-AYEHAQIL---PDIMTSAKALGC 252 (395)
T ss_dssp CTTEEEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGGTCC---CSEEEECGGGTT
T ss_pred cCCeEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCCcch-hHHhcCCC---CCEEEecccccC
Confidence 8778777777777777765 778889999999999999999999999876655321 22222222 224468899864
Q ss_pred CCceeEEEEeeCCCCcccchhH-HHHHHhhh-hhccCcchHHHHHHHHHHhhch-HHHHHHHHHHHHHHHHHHHHHhhcC
Q 014603 260 PGWRLGWLVTSDPNGILQDSGI-VDSIKSFL-NISSDPATFIQGAVPQILEKTE-EEFFSKITDILRETADICCDRLKEI 336 (422)
Q Consensus 260 ~G~r~G~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~ 336 (422)
|+|+||++++ +++ .+.+.... ..+.+.++++++++.++|+... +...++.++..+..++.+.+.+.++
T Consensus 253 -G~~~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 323 (395)
T 3nx3_A 253 -GLSVGAFVIN--------QKVASNSLEAGDHGSTYGGNPLVCAGVNAVFEIFKEEKILENVNKLTPYLEQSLDELINEF 323 (395)
T ss_dssp -TSCCEEEEEC--------HHHHHHHSCTTCCSSCBSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred -CCceEEEEEc--------hhhhhhhcCCcccCCCCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999986 456 66665543 2345778899999988887532 2334444444444455555545455
Q ss_pred CCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHHHHHH
Q 014603 337 PCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGRMKAF 414 (422)
Q Consensus 337 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~l~~~ 414 (422)
|.+. . .+..|.++++.++.. .+..++...+ .++||.+.++. .+++|++++ ++++++++++++|+++
T Consensus 324 ~~~~-~-~~~~g~~~~~~~~~~-----~~~~~~~~~l-~~~Gi~v~~~~----~~~iRi~~~~~~t~e~i~~~l~~l~~~ 391 (395)
T 3nx3_A 324 DFCK-K-RKGLGFMQGLSLDKS-----VKVAKVIQKC-QENALLLISCG----ENDLRFLPPLILQKEHIDEMSEKLRKA 391 (395)
T ss_dssp TTEE-E-EEEETTEEEEEECTT-----SCHHHHHHHH-HHTTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred CCeE-E-EEeEEEEEEEEeCCc-----chHHHHHHHH-HHCCCEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 5443 2 234467888888642 1456666665 55699999874 689999976 6899999999999998
Q ss_pred HHH
Q 014603 415 YDR 417 (422)
Q Consensus 415 ~~~ 417 (422)
+++
T Consensus 392 l~~ 394 (395)
T 3nx3_A 392 LKS 394 (395)
T ss_dssp HHT
T ss_pred HHh
Confidence 864
No 131
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=100.00 E-value=4e-31 Score=248.20 Aligned_cols=327 Identities=11% Similarity=0.031 Sum_probs=231.8
Q ss_pred CceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHH
Q 014603 46 PLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEV 125 (422)
Q Consensus 46 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~ 125 (422)
..++|+-|. .+.++.+.+++.+.+.+.....+.......++.+.+.+.+.+.+|.. +++++++|+|++++++.
T Consensus 4 ~~~~~~p~p------~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~-~~~~v~~~~g~t~al~~ 76 (362)
T 3ffr_A 4 NKIYFTPGP------SELYPTVRQHMITALDEKIGVISHRSKKFEEVYKTASDNLKTLLELP-SNYEVLFLASATEIWER 76 (362)
T ss_dssp CCEEECSSS------CCCCTTHHHHHHHHHHTTTTTSCTTSHHHHHHHHHHHHHHHHHTTCC-TTEEEEEESCHHHHHHH
T ss_pred cceeccCCC------cCCCHHHHHHHHHHhcCCccCcCCCCHHHHHHHHHHHHHHHHHhCCC-CCcEEEEeCCchHHHHH
Confidence 346665553 35678888888887765431111112222233444444444444422 46789999999999999
Q ss_pred HHHHhcCCCCEEEecCCCcc-chHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHH
Q 014603 126 ILTVLARPGANILLPRPGFP-YYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQH 204 (422)
Q Consensus 126 ~~~~l~~~gd~Vl~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~ 204 (422)
++.++.++ +.+++..+.|. .+...++..|.+++.++.+ .++.+|++.|+ ++++++++++++|+||||.+++
T Consensus 77 ~~~~l~~~-~~i~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~--~~~~~~~v~~~~~~nptG~~~~--- 148 (362)
T 3ffr_A 77 IIQNCVEK-KSFHCVNGSFSKRFYEFAGELGREAYKEEAA--FGKGFYPADIT--VPADAEIICLTHNETSSGVSMP--- 148 (362)
T ss_dssp HHHHHCSS-EEEEEECSHHHHHHHHHHHHTTCEEEEEECC--TTCCCCGGGCC--CCTTCCEEEEESEETTTTEECC---
T ss_pred HHHhccCC-cEEEEcCcHHHHHHHHHHHHhCCCeEEEecC--CCCCCCHHHHh--ccCCccEEEEEcCCCCcceeCC---
Confidence 99999887 44445555554 2345667789999988874 34678999988 6778999999999999999987
Q ss_pred HHHHHHHHHHc-CcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccC-CCCceeEEEEeeCCCCcccchhHH
Q 014603 205 LQKIAETAKKL-GIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWI-VPGWRLGWLVTSDPNGILQDSGIV 282 (422)
Q Consensus 205 l~~i~~~~~~~-~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~-~~G~r~G~~~~~~~~~~~~~~~~~ 282 (422)
+++|.++|+++ |+++|+|++|+.... ..++.. ..+++.|+||+++ ++| +|+++++ ++++
T Consensus 149 l~~i~~la~~~p~~~li~D~a~~~~~~----~~~~~~-----~d~~~~s~~K~~~~~~G--~g~~~~~--------~~~~ 209 (362)
T 3ffr_A 149 VEDINTFRDKNKDALIFVDAVSSLPYP----KFDWTK-----IDSVFFSVQKCFGLPAG--LGVWILN--------DRVI 209 (362)
T ss_dssp HHHHTTSGGGSTTSEEEEECTTTTTSS----CCCTTS-----CSEEEEETTSTTCCCSC--CEEEEEE--------HHHH
T ss_pred HHHHHHHHHhCCCCEEEEecccccCCc----ccChhH-----CcEEEEecccccCCCCc--eEEEEEC--------HHHH
Confidence 67788889999 999999999876321 112221 2388899999987 677 5777775 4566
Q ss_pred HHHHhhhh----------------------hccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 014603 283 DSIKSFLN----------------------ISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCIT 340 (422)
Q Consensus 283 ~~~~~~~~----------------------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 340 (422)
+++..... ..++++...+.++..+++...+..+++..++++++++.+.+.|+++|++.
T Consensus 210 ~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~ 289 (362)
T 3ffr_A 210 EKSKALLAKRKSIGTYHTIPSMLEKARVNQTPETPNAMNIFLLGKVTGDMLQISADGIRKQTEEKAALINTYIESSKVFS 289 (362)
T ss_dssp HHHHHHHHTTCCCCSTTSHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCSSEE
T ss_pred HHhhhccccCCCCcccccHHHHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccCce
Confidence 66654332 13466777777777777643334478889999999999999999998877
Q ss_pred CCCCC----CCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHHHHHH
Q 014603 341 CPKKP----EGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGRMKAF 414 (422)
Q Consensus 341 ~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~l~~~ 414 (422)
+. .+ ..+.++|+.++. +..++...+.+ +||.+.+|..+..++++||+++ ++++++++++++|+++
T Consensus 290 ~~-~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~-~gi~~~~g~~~~~~~~iRis~~~~~~~e~i~~l~~~l~~~ 360 (362)
T 3ffr_A 290 FG-VEDAKLRSMTTIVANTTM-------LPGEINKILEP-FDMAVGAGYGSKKETQIRIANFPAHSLEQVHKLVQTLKEK 360 (362)
T ss_dssp ES-SSCGGGBCSSEEEEEESS-------CHHHHHHHHGG-GTEEEEECSGGGTTTEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred ec-cCChhhcCCceEEEecCC-------CHHHHHHHHHH-CCeEEecCccccCCCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 43 32 235567777753 46677777655 4999999977666889999997 6889999999998875
Q ss_pred H
Q 014603 415 Y 415 (422)
Q Consensus 415 ~ 415 (422)
+
T Consensus 361 ~ 361 (362)
T 3ffr_A 361 I 361 (362)
T ss_dssp T
T ss_pred h
Confidence 3
No 132
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=100.00 E-value=4e-32 Score=258.28 Aligned_cols=337 Identities=17% Similarity=0.150 Sum_probs=232.3
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCC--CCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARF--NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT 120 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~ 120 (422)
++..++||+.+.+....+ +++|.+.+++.+++..... ..| +.....++++.+++++ +++++++++++|++
T Consensus 43 ~g~~~ld~~~~~~~~~~g-~~~~~v~~a~~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~------~~~~~~v~~~~gg~ 114 (395)
T 1vef_A 43 EGNEYIDCVGGYGVANLG-HGNPEVVEAVKRQAETLMAMPQTL-PTPMRGEFYRTLTAIL------PPELNRVFPVNSGT 114 (395)
T ss_dssp TSCEEEESSHHHHTCTTC-BTCHHHHHHHHHHHHHCCCCCTTS-CCHHHHHHHHHHHHTS------CTTEEEEEEESSHH
T ss_pred CCCEEEEccCccccccCC-CCCHHHHHHHHHHHHhCCCCcccc-CCHHHHHHHHHHHHhc------CCCcCEEEEcCcHH
Confidence 467789998875421111 2788999999998865321 123 2233456666666665 34678999999999
Q ss_pred HHHHHHHHHhc--CCCCEEEecCCCccchH-HHHhhCCCeEEE---eeccCCCC--cccCHHHHHHhhcCCceEEEEeCC
Q 014603 121 QAIEVILTVLA--RPGANILLPRPGFPYYE-ARATHSHLEVRH---FDLLPAKG--WEVDLDAVEALADENTVALVIINP 192 (422)
Q Consensus 121 ~a~~~~~~~l~--~~gd~Vl~~~~~~~~~~-~~~~~~g~~~~~---~~~~~~~~--~~~d~~~l~~~~~~~~~~i~i~~p 192 (422)
+|++.+++++. .+||.|++.+|+|++.. ......|.+.+. .|+..+.. ...|++.|++.+++++++++++.+
T Consensus 115 ~a~~~al~~~~~~~~~~~vi~~~~~y~~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~ 194 (395)
T 1vef_A 115 EANEAALKFARAHTGRKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVEFIPYNDVEALKRAVDEETAAVILEPV 194 (395)
T ss_dssp HHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEEEECTTCHHHHHHHCCTTEEEEEECSE
T ss_pred HHHHHHHHHHHHHhCCCeEEEEcCCcCCCchhhhhhcCCcccccccCCCCCCeeEeCCCcHHHHHHHhccCEEEEEEeCc
Confidence 99999998764 57899999999997643 455555654211 11110000 014899999999877777765555
Q ss_pred CCCccccc-CHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeC
Q 014603 193 GNPCGNVY-TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD 271 (422)
Q Consensus 193 ~nptG~~~-~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~ 271 (422)
+||||.++ +.+++++|.++|+++|+++|+||+|+++.+.|... .+...+...+++ |+||++++ |+|+||++++
T Consensus 195 ~~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~g~~~-~~~~~~~~~d~~---s~sK~~~~-g~~~G~~~~~- 268 (395)
T 1vef_A 195 QGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRF-AFEHFGIVPDIL---TLAKALGG-GVPLGVAVMR- 268 (395)
T ss_dssp ETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-THHHHTCCCSEE---EECGGGGT-TSSCEEEEEE-
T ss_pred cCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCccCCchh-HhhhcCCCCCEE---EEcccccC-CCceEEEEeh-
Confidence 78999864 68889999999999999999999999755444321 122222222222 78999876 8999999987
Q ss_pred CCCcccchhHHHHHHhhh-hhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC-CCCCCce
Q 014603 272 PNGILQDSGIVDSIKSFL-NISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCP-KKPEGSM 349 (422)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~g~ 349 (422)
+++++.+.... ..+.+++++.+.++.++++...+ .+..++++++++.+.+.|++++. ... ..+..|.
T Consensus 269 -------~~~~~~l~~~~~~~~~~~~~~~~~a~~~al~~~~~---~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~~~~g~ 337 (395)
T 1vef_A 269 -------EEVARSMPKGGHGTTFGGNPLAMAAGVAAIRYLER---TRLWERAAELGPWFMEKLRAIPS-PKIREVRGMGL 337 (395)
T ss_dssp -------HHHHHTSCTTSSCCSSTTCHHHHHHHHHHHHHHHH---HTTHHHHHHHHHHHHHHHHTSCC-TTEEEEEEETT
T ss_pred -------HHHHhhhccCCcCCCcCCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHhhc-CceEEEEEEEE
Confidence 35666555422 22345678888888888875322 34677888899999999988732 211 1234567
Q ss_pred EEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHHHHHHH
Q 014603 350 FVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGRMKAFY 415 (422)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~l~~~~ 415 (422)
++|+.++. +..++...+.+++||.+.|+. .+++||+++ ++++++++++++|++++
T Consensus 338 ~~~~~~~~-------~~~~l~~~l~~~~gi~v~~~~----~~~iRi~~~~~~~~~~i~~~~~~l~~~l 394 (395)
T 1vef_A 338 MVGLELKE-------KAAPYIARLEKEHRVLALQAG----PTVIRFLPPLVIEKEDLERVVEAVRAVL 394 (395)
T ss_dssp EEEEEESS-------CSHHHHHHHHHHHCEECEESS----TTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred EEEEEEcC-------hHHHHHHHHHHHCCeEEecCC----CCEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 88888863 245677777536799999863 689999886 78999999999998875
No 133
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=100.00 E-value=1.6e-31 Score=258.73 Aligned_cols=353 Identities=11% Similarity=0.045 Sum_probs=235.8
Q ss_pred cCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHH
Q 014603 42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ 121 (422)
Q Consensus 42 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 121 (422)
.+|+.++||..|......+ +.+|++.+++.+++.+... .|....+..+.++.+++++.+.+ +.+.++|++++|+++
T Consensus 47 ~~g~~ylD~~~~~~~~~lG-~~~p~v~~A~~~~~~~~~~-~~~~~~~~~~~~~~la~~l~~~~--~~~~~~v~~~~ggse 122 (459)
T 4a6r_A 47 SEGNKIIDGMAGLWCVNVG-YGRKDFAEAARRQMEELPF-YNTFFKTTHPAVVELSSLLAEVT--PAGFDRVFYTNSGSE 122 (459)
T ss_dssp TTCCEEEETTHHHHTCTTC-BCCHHHHHHHHHHHHHCSC-CCTTSSSCCHHHHHHHHHHHHHS--CTTCCEEEEESSHHH
T ss_pred CCCCEEEECCCchhcccCC-CCCHHHHHHHHHHHHhccc-cccccccCCHHHHHHHHHHHHhC--CCCCCEEEEeCchHH
Confidence 3588899999885442222 3479999999999876321 33333344566666777666654 346679999999999
Q ss_pred HHHHHHHHhcC--------CCCEEEecCCCccchHHHHhhCCC-------------eEEEeeccC--C-CCcccC-----
Q 014603 122 AIEVILTVLAR--------PGANILLPRPGFPYYEARATHSHL-------------EVRHFDLLP--A-KGWEVD----- 172 (422)
Q Consensus 122 a~~~~~~~l~~--------~gd~Vl~~~~~~~~~~~~~~~~g~-------------~~~~~~~~~--~-~~~~~d----- 172 (422)
|++.+++.++. +++.|++.+|+|+++...+...+. ++..++... . +++ .|
T Consensus 123 A~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~d~~~~~ 201 (459)
T 4a6r_A 123 SVDTMIRMVRRYWDVQGKPEKKTLIGRWNGYHGSTIGGASLGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKD-MTPDEFG 201 (459)
T ss_dssp HHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCTTTC---CCSCSSEEEECCCCHHHHCTT-CCHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHhhcCChhhccccCCCCCCCEEeCCCccccCCcc-cCHHHHH
Confidence 99999998875 468999999999988655544321 223333211 0 111 24
Q ss_pred ---HHHHHHhhcC---CceEEEEeCCC-CCccc-ccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCC
Q 014603 173 ---LDAVEALADE---NTVALVIINPG-NPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSI 244 (422)
Q Consensus 173 ---~~~l~~~~~~---~~~~i~i~~p~-nptG~-~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~ 244 (422)
++.|++.+.. +..++++++|. +++|. .++.+++++|.++|++||+++|+||+|.++.++|... .....+..
T Consensus 202 ~~~~~~le~~i~~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~G~~~-~~~~~~~~ 280 (459)
T 4a6r_A 202 VVAARWLEEKILEIGADKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRTGEWF-GHQHFGFQ 280 (459)
T ss_dssp HHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-HHHHHTCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccc-hHhhcCCC
Confidence 6788887752 45567777774 45555 5688999999999999999999999999887766422 22233333
Q ss_pred CCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHH---hhh-hhccCcchHHHHHHHHHHhhch-HHHHHHHH
Q 014603 245 VPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIK---SFL-NISSDPATFIQGAVPQILEKTE-EEFFSKIT 319 (422)
Q Consensus 245 ~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~ 319 (422)
+++ .++||.++.+|+|+|+++++ +++++.+. ... ..+.+.++++++++.++|+... +..+++.+
T Consensus 281 pdi---~t~sK~l~gg~~~lg~v~~~--------~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~ 349 (459)
T 4a6r_A 281 PDL---FTAAKGLSSGYLPIGAVFVG--------KRVAEGLIAGGDFNHGFTYSGHPVCAAVAHANVAALRDEGIVQRVK 349 (459)
T ss_dssp CSE---EEECGGGGTTSSCCEEEEEC--------HHHHHHHHHHCTTHHHHHHCSCHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred CCe---eehhhhhcCCCCCccceeeC--------HHHHHHhhcCCCcccCCCCCCCHHHHHHHHHHHHHHhcchHHHHHH
Confidence 333 35789976666999999986 57888876 222 3345778899999999998533 23344444
Q ss_pred -HHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCccccc--C----CCCHHHHHHHHHHhcCeEEecCCCCCCCCe
Q 014603 320 -DILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLE--G----INSDMEFALKLAKEESVIVLPGITVGLKDW 392 (422)
Q Consensus 320 -~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~----~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~ 392 (422)
+.....++.+.+.|++++.+. . .+..|.++++.+...... . .....++...+ .++||.+.|+. ++
T Consensus 350 ~~~~~~~~~~l~~~l~~~~~~~-~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~g-----~~ 421 (459)
T 4a6r_A 350 DDIGPYMQKRWRETFSRFEHVD-D-VRGVGMVQAFTLVKNKAKRELFPDFGEIGTLCRDIF-FRNNLIMRACG-----DH 421 (459)
T ss_dssp HTHHHHHHHHHHHHHTTCTTEE-E-EEEETTEEEEEECSBTTTTBCCSSTTHHHHHHHHHH-HHTTEECEEET-----TE
T ss_pred HHHHHHHHHHHHHHHhcCCCeE-E-EEEEEEEEEEEEecCccccccccchHHHHHHHHHHH-HHCCeEEecCC-----CE
Confidence 444455555545566665444 2 233466777776532100 0 00034555555 45699999863 78
Q ss_pred EEEEec--cChHHHHHHHHHHHHHHHHhc
Q 014603 393 LRITFA--VEPSALEDGLGRMKAFYDRHA 419 (422)
Q Consensus 393 iRis~~--~~~~~l~~~~~~l~~~~~~~~ 419 (422)
+||+++ ++++++++++++|++++++..
T Consensus 422 iRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 450 (459)
T 4a6r_A 422 IVSAPPLVMTRAEVDEMLAVAERCLEEFE 450 (459)
T ss_dssp EEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 999975 799999999999999998764
No 134
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=100.00 E-value=2.5e-31 Score=257.62 Aligned_cols=325 Identities=15% Similarity=0.138 Sum_probs=223.5
Q ss_pred CCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecC
Q 014603 62 RTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPR 141 (422)
Q Consensus 62 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~ 141 (422)
+.++.+.+++. .. ...|.+..+..++|++++++++ .+++++++||++|++.++.+++++|| +++.
T Consensus 55 ~~~~~~~~a~~----~~-~~~y~~~~~~~~l~~~la~~~~--------~~~~~~~~~gt~a~~~al~~l~~~gd--i~~~ 119 (456)
T 2ez2_A 55 AMSDKQWAGMM----MG-DEAYAGSENFYHLERTVQELFG--------FKHIVPTHQGRGAENLLSQLAIKPGQ--YVAG 119 (456)
T ss_dssp CCCHHHHHHHT----TC-CCCSSSCHHHHHHHHHHHHHHC--------CSEEEEESSHHHHHHHHHHHHCCTTC--EEEE
T ss_pred cCCHHHHHHhh----cc-hhhcccChhHHHHHHHHHHHhC--------CCcEEEeCCcHHHHHHHHHHhCCCCC--Eecc
Confidence 44577777665 21 2367777788999999999993 34899999999999999999999999 7888
Q ss_pred CCc-cchHHHHhhCCCeEEEeeccCC----C----CcccCHHHHHHhhcCCc----eEEEEeCCCC-CcccccCHHHHHH
Q 014603 142 PGF-PYYEARATHSHLEVRHFDLLPA----K----GWEVDLDAVEALADENT----VALVIINPGN-PCGNVYTYQHLQK 207 (422)
Q Consensus 142 ~~~-~~~~~~~~~~g~~~~~~~~~~~----~----~~~~d~~~l~~~~~~~~----~~i~i~~p~n-ptG~~~~~~~l~~ 207 (422)
|+| ..+...+...|.+++.+++++. . ++.+|++.|++.+++++ +++++++|+| |||.+++.+++++
T Consensus 120 ~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~t~~~~~~v~l~~p~n~ptG~~~~~~~l~~ 199 (456)
T 2ez2_A 120 NMYFTTTRYHQEKNGAVFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKGAENIAYICLAVTVNLAGGQPVSMANMRA 199 (456)
T ss_dssp SSCCHHHHHHHHHTTCEEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHH
T ss_pred ccccchhHHHHHHcCCEEEEecccccccccccccccCCCCHHHHHHHHHhccccceeEEEEeccCCCCCCccCCHHHHHH
Confidence 999 6667888889999998887631 2 36789999999887654 7888999998 9999999999999
Q ss_pred HHHHHHHcCcEEEEcccccc----------cccCCCCCCCcc-ccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcc
Q 014603 208 IAETAKKLGIMVIADEVYDH----------LAFGNTPFVPMG-VFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGIL 276 (422)
Q Consensus 208 i~~~~~~~~~~li~D~~~~~----------~~~~~~~~~~~~-~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~ 276 (422)
|+++|++||+++|+||+|+. +.+.+....++. ..+...+++++ |++|. +++| +.||+++++
T Consensus 200 i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~-S~kk~-~~~~-~gG~~~~~~----- 271 (456)
T 2ez2_A 200 VRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMFSYADGCTM-SGKKD-CLVN-IGGFLCMND----- 271 (456)
T ss_dssp HHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTTCSEEEE-ETTTT-TCCS-SCEEEEESC-----
T ss_pred HHHHHHHcCCeEEEEccccccccccccccccccCCcchhhhhhhhcccCCEEEE-eCccc-CCCC-ceeEEEECC-----
Confidence 99999999999999999986 345443211000 01111234444 78887 4566 789998843
Q ss_pred cchhHHHHHHhhhhh------ccCcchHHHHH-HHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCce
Q 014603 277 QDSGIVDSIKSFLNI------SSDPATFIQGA-VPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSM 349 (422)
Q Consensus 277 ~~~~~~~~~~~~~~~------~~~~~~~~~~a-~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~ 349 (422)
+++++.+...... ..+.+.....+ +...++... ++..++.+++.+.+.+.|++. ++. +..|.+++
T Consensus 272 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~a~~~~~~~~----~~~~~~~~~~~~~l~~~L~~~-g~~-~~~p~~~~ 343 (456)
T 2ez2_A 272 --DEMFSSAKELVVVYEGMPSYGGLAGRDMEAMAIGLREAMQ----YEYIEHRVKQVRYLGDKLKAA-GVP-IVEPVGGH 343 (456)
T ss_dssp --HHHHHHHHHHHHHHTCCTTTTTCCHHHHHHHHHHHHHHTC----HHHHHHHHHHHHHHHHHHHHT-TCC-BCSSCCSS
T ss_pred --HHHHHHHHHHHhhccCcccccCcchhHHHHHHHHHHHHhH----HHHHHHHHHHHHHHHHHHhcC-CCc-cccCCCce
Confidence 4677766554321 11222222222 222222111 344455556667778888775 666 33677788
Q ss_pred EEEEecCcccccCCCCHHHH-----HHHHHHhcCeEEec-CCCC------------CCCCeEEEEec---cChHHHHHHH
Q 014603 350 FVMVKLNYSLLEGINSDMEF-----ALKLAKEESVIVLP-GITV------------GLKDWLRITFA---VEPSALEDGL 408 (422)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~-----~~~l~~~~gi~v~~-g~~~------------~~~~~iRis~~---~~~~~l~~~~ 408 (422)
++|+.+.... .+ .+..++ ...+++++||.+.+ |..| ...+++|++++ ++++++++++
T Consensus 344 ~~~~~~~~~~-~~-~~~~~~~~~~l~~~L~~~~gv~~~~~g~~~~~~~~~~g~~~~~~~~~iRis~~~~~~t~e~i~~~~ 421 (456)
T 2ez2_A 344 AVFLDARRFC-EH-LTQDEFPAQSLAASIYVETGVRSMERGIISAGRNNVTGEHHRPKLETVRLTIPRRVYTYAHMDVVA 421 (456)
T ss_dssp EEEEEHHHHT-TT-SCGGGCHHHHHHHHHHHHHSEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTTCCHHHHHHHH
T ss_pred EEEEEhHHhc-CC-CChhhccHHHHHHHHHHhcCeeeecccccccccCccccccccCCCCeEEEEeCCCCCCHHHHHHHH
Confidence 9998863200 00 022233 55554677998765 4322 11478999998 6899999999
Q ss_pred HHHHHHHHHhc
Q 014603 409 GRMKAFYDRHA 419 (422)
Q Consensus 409 ~~l~~~~~~~~ 419 (422)
++|++++++..
T Consensus 422 ~~l~~~l~~~~ 432 (456)
T 2ez2_A 422 DGIIKLYQHKE 432 (456)
T ss_dssp HHHHHHHHTGG
T ss_pred HHHHHHHhhhh
Confidence 99999987653
No 135
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=100.00 E-value=1.8e-31 Score=258.06 Aligned_cols=351 Identities=12% Similarity=0.080 Sum_probs=227.1
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 122 (422)
+|+.+|||..|.+....+ +.+|++.+++.+++.+... ....+..+.+..+++++.+.++ ...+ |++|+||++|
T Consensus 47 ~g~~~lD~~~~~~~~~lG-~~~p~v~~A~~~~~~~~~~---~~~~~~~~~~~~la~~l~~~~~--~~~~-v~~~~ggseA 119 (452)
T 3n5m_A 47 QGKRYLDGMSGLWCVNSG-YGRKELAEAAYKQLQTLSY---FPMSQSHEPAIKLAEKLNEWLG--GEYV-IFFSNSGSEA 119 (452)
T ss_dssp TCCEEEETTHHHHTCTTC-BCCHHHHHHHHHHHTTCCC---CCTTSEEHHHHHHHHHHHHHHT--SCEE-EEEESSHHHH
T ss_pred CCCEEEECCcchhhccCC-CCCHHHHHHHHHHHHhcCC---cccccCCHHHHHHHHHHHHhCC--CCce-EEEeCchHHH
Confidence 578899999885443233 3579999999999876322 1122333445555555544333 3444 9999999999
Q ss_pred HHHHHHHhc-----C---CCCEEEecCCCccchHHHHhhCCCe-------------EEEeeccCCCCccc-C--------
Q 014603 123 IEVILTVLA-----R---PGANILLPRPGFPYYEARATHSHLE-------------VRHFDLLPAKGWEV-D-------- 172 (422)
Q Consensus 123 ~~~~~~~l~-----~---~gd~Vl~~~~~~~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~-d-------- 172 (422)
++.+++.++ . ++++|++.+|+|+++...+...+.. ...++......... |
T Consensus 120 ~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (452)
T 3n5m_A 120 NETAFKIARQYYAQKGEPHRYKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDCYRMPGIERENIYDVE 199 (452)
T ss_dssp HHHHHHHHHHHHHTTTCTTCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCGGGCH
T ss_pred HHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEeCCCccccCccCCchhhHHHH
Confidence 999999876 4 6799999999999876555544321 22232211000000 1
Q ss_pred -HHHHHHhhc----CCceEEEEeCC-CCCccccc-CHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCC
Q 014603 173 -LDAVEALAD----ENTVALVIINP-GNPCGNVY-TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIV 245 (422)
Q Consensus 173 -~~~l~~~~~----~~~~~i~i~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~ 245 (422)
++.|++.++ +++++++++.+ +| +|.++ +.+++++|.++|++||+++|+||+|.++.+.|... .....+..+
T Consensus 200 ~~~~le~~l~~~~~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~-~~~~~~~~~ 277 (452)
T 3n5m_A 200 CVKEVDRVMTWELSETIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRTGKAF-GFMNYDVKP 277 (452)
T ss_dssp HHHHHHHHHHHHCGGGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGTTCCC
T ss_pred HHHHHHHHHHhcCCCCEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCcccccc-hhhhcCCCC
Confidence 788888876 34455555555 79 99765 88889999999999999999999999887766432 223333222
Q ss_pred CeEEEecCccccCCCC-ceeEEEEeeCCCCcccchhHHHHHHh----h---hhhccCcchHHHHHHHHHHhhch-HHHHH
Q 014603 246 PVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKS----F---LNISSDPATFIQGAVPQILEKTE-EEFFS 316 (422)
Q Consensus 246 ~~i~i~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~----~---~~~~~~~~~~~~~a~~~~l~~~~-~~~~~ 316 (422)
+ +.++||.+++ | +|+||++++ +++++.+.. . ...+.+.++++++++.++|+... +..++
T Consensus 278 d---i~t~sK~l~~-G~~~ig~~~~~--------~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~ 345 (452)
T 3n5m_A 278 D---IITMAKGITS-AYLPLSATAVK--------REIYEAFKGKGEYEFFRHINTFGGNPAACALALKNLEIIENENLIE 345 (452)
T ss_dssp S---EEEECGGGGT-TSSCCEEEEEE--------HHHHGGGCSSSTTCSCCCCCSSTTCHHHHHHHHHHHHHHHHTTHHH
T ss_pred C---EEeecccccC-CCcceEEEEEC--------HHHHHHHhhccCCCCccccCCCCCCHHHHHHHHHHHHHHHhccHHH
Confidence 2 3367899865 9 999999986 467777643 1 12345778899999999887533 22334
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccccC--C--CCHHHHHHHHHHhcCeEEecCCCCCC--C
Q 014603 317 KITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEG--I--NSDMEFALKLAKEESVIVLPGITVGL--K 390 (422)
Q Consensus 317 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--~--~~~~~~~~~l~~~~gi~v~~g~~~~~--~ 390 (422)
+..+..+..++.+.+.++++|.+. . .+..|.++++.+....... . ....++...+ .++||.+.|+..|.. +
T Consensus 346 ~~~~~~~~l~~~L~~~~~~~~~~~-~-~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~~~~~~~~~~~~~ 422 (452)
T 3n5m_A 346 RSAQMGSLLLEQLKEEIGEHPLVG-D-IRGKGLLVGIELVNDKETKEPIDNDKIASVVNAC-KEKGLIIGRNGMTTAGYN 422 (452)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTEE-E-EEESSSCEEEEEEEETTTTEECCHHHHHHHHHHH-HHTTEECEECTTSSTTCC
T ss_pred HHHHHHHHHHHHHHHHHhcCCCeE-E-EEEEEEEEEEEEecCCcccCCCCHHHHHHHHHHH-HHCCcEEeecCcccCCCC
Confidence 444444444444444445555443 2 2334566676663211000 0 0013455554 566999999876533 5
Q ss_pred CeEEEEec--cChHHHHHHHHHHHHHHHH
Q 014603 391 DWLRITFA--VEPSALEDGLGRMKAFYDR 417 (422)
Q Consensus 391 ~~iRis~~--~~~~~l~~~~~~l~~~~~~ 417 (422)
+++||+++ ++++++++++++|++++++
T Consensus 423 ~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 451 (452)
T 3n5m_A 423 NILTLAPPLVISSEEIAFVIGTLKTAMER 451 (452)
T ss_dssp CEEEECCCTTCCHHHHHHHHHHHHHHHTT
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 89999866 7899999999999998864
No 136
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=100.00 E-value=3.3e-31 Score=256.64 Aligned_cols=356 Identities=14% Similarity=0.026 Sum_probs=238.6
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 122 (422)
+|+.+|||..|......+ ..+|.+.+++.+++.+... .|....+..++++.+++++.+.. +.+.++|++++|+++|
T Consensus 49 ~G~~~lD~~~~~~~~~lG-~~~p~v~~A~~~~~~~~~~-~~~~~~~~~~~~~~la~~l~~~~--~~~~~~v~~~~gGseA 124 (460)
T 3gju_A 49 NGRKSIDAFAGLYCVNVG-YGRQKIADAIATQAKNLAY-YHAYVGHGTEASITLAKMIIDRA--PKGMSRVYFGLSGSDA 124 (460)
T ss_dssp TCCEEEETTHHHHTCTTC-BCCHHHHHHHHHHHHHHSC-CCCCTTCCCHHHHHHHHHHHHHS--CTTEEEEEEESSHHHH
T ss_pred CCCEEEECCcchhhccCC-CCCHHHHHHHHHHHHhccc-cccccccCCHHHHHHHHHHHhhC--CCCcCEEEEeCchHHH
Confidence 688899999884332122 3579999999998875321 33333344566666666666543 3466799999999999
Q ss_pred HHHHHHHhcC--------CCCEEEecCCCccchHHHHhhCCC-------------eEEEeeccC---CCCcccC------
Q 014603 123 IEVILTVLAR--------PGANILLPRPGFPYYEARATHSHL-------------EVRHFDLLP---AKGWEVD------ 172 (422)
Q Consensus 123 ~~~~~~~l~~--------~gd~Vl~~~~~~~~~~~~~~~~g~-------------~~~~~~~~~---~~~~~~d------ 172 (422)
++.++++++. +++.|++.+++|+++...+...+. .+..++... .++.+.+
T Consensus 125 ~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~ 204 (460)
T 3gju_A 125 NETNIKLIWYYNNVLGRPEKKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQ 204 (460)
T ss_dssp HHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHhhccCCcccccccCCCCCCCEEeCCCccccCCccccChhHHHH
Confidence 9999998863 458999999999987655443321 234444211 0111223
Q ss_pred --HHHHHHhhcC---CceEEEEeCC-CCCccc-ccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCC
Q 014603 173 --LDAVEALADE---NTVALVIINP-GNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIV 245 (422)
Q Consensus 173 --~~~l~~~~~~---~~~~i~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~ 245 (422)
++.|++.+.+ +..++++++| +|++|. +++.+++++|.++|++||+++|+||+|+++.+.|... .....+..+
T Consensus 205 ~~~~~le~~i~~~~~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~-~~~~~~~~p 283 (460)
T 3gju_A 205 HCADKLEEMILAEGPETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGRLGTMF-GSDHYGIKP 283 (460)
T ss_dssp HHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSC-HHHHHTCCC
T ss_pred HHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccc-hHhhcCCCC
Confidence 5778887752 3445556666 666776 6788889999999999999999999999877666422 222233332
Q ss_pred CeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhh-------h-hhccCcchHHHHHHHHHHhhch-HHHHH
Q 014603 246 PVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSF-------L-NISSDPATFIQGAVPQILEKTE-EEFFS 316 (422)
Q Consensus 246 ~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~~~~~a~~~~l~~~~-~~~~~ 316 (422)
+ +.++||+++..++|+||++++ +++++.+... . ..+.+.++++++++.++|+... +..++
T Consensus 284 d---i~t~sK~l~gG~~~lg~v~~~--------~~i~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~ 352 (460)
T 3gju_A 284 D---LITIAKGLTSAYAPLSGVIVA--------DRVWQVLVQGSDKLGSLGHGWTYSAHPICVAAGVANLELIDEMDLVT 352 (460)
T ss_dssp S---EEEECGGGTTTSSCCEEEEEE--------HHHHHHHHHHHHHHCSCSCCCTTTTCHHHHHHHHHHHHHHHHTTHHH
T ss_pred C---eeeeehhhcCCCCCeEEEEEC--------HHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHhccHHH
Confidence 3 336789964423899999987 5788887532 1 2345778899999999998543 34456
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCccccc--C----CCCHHHHHHHHHHhcCeEEecCCCCCCC
Q 014603 317 KITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLE--G----INSDMEFALKLAKEESVIVLPGITVGLK 390 (422)
Q Consensus 317 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~----~~~~~~~~~~l~~~~gi~v~~g~~~~~~ 390 (422)
+.++..+..++.+.+.+++++.+. . .+..|.++++.+...... . .....++...+ .++||.+.|+. ..
T Consensus 353 ~~~~~~~~~~~~l~~~l~~~~~~~-~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~~---~~ 426 (460)
T 3gju_A 353 NAGETGAYFRAELAKAVGGHKNVG-E-VRGDGMLAAVEFVADKDDRVFFDASQKIGPQVATAL-AASGVIGRAMP---QG 426 (460)
T ss_dssp HHHHHHHHHHHHHHHHHTTSTTEE-E-EEEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHH-HHTTEECEECS---SS
T ss_pred HHHHHHHHHHHHHHHHHhcCCCeE-E-EeeeeEEEEEEEccCccccccccchHHHHHHHHHHH-HHCCeEEecCC---CC
Confidence 666666666777777777776554 2 233466777776532100 0 00134455555 55699999975 35
Q ss_pred CeEEEEec--cChHHHHHHHHHHHHHHHHhcc
Q 014603 391 DWLRITFA--VEPSALEDGLGRMKAFYDRHAK 420 (422)
Q Consensus 391 ~~iRis~~--~~~~~l~~~~~~l~~~~~~~~~ 420 (422)
+++||+++ .+++++++++++|++++++..+
T Consensus 427 ~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~~ 458 (460)
T 3gju_A 427 DILGFAPPLCLTREQADIVVSKTADAVKSVFA 458 (460)
T ss_dssp CEEEECCCTTCCHHHHHHHHHHHHHHHHHHHC
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 89999965 7899999999999999988754
No 137
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=100.00 E-value=3.1e-31 Score=253.09 Aligned_cols=335 Identities=14% Similarity=0.090 Sum_probs=236.8
Q ss_pred CCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCC---CCHH--HHH-----HHHHHHhhcCCCCCCCCCEE
Q 014603 45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTV---GILP--ARR-----AIADYLNRDLPYKLSPDDVY 114 (422)
Q Consensus 45 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~---g~~~--lr~-----~ia~~l~~~~~~~~~~~~i~ 114 (422)
..+|+|..|.+. .+|.+.+++.+++.+.....|+... |.+. +++ .+++++ +.+++.|+
T Consensus 23 ~~~i~~~~~~~~------~~~~v~~a~~~~~~~~~~~~y~~~~~~~g~~~~~~~e~~ar~~la~~~------g~~~~~i~ 90 (407)
T 2dkj_A 23 REGLELIASENF------VSKQVREAVGSVLTNKYAEGYPGARYYGGCEVIDRVESLAIERAKALF------GAAWANVQ 90 (407)
T ss_dssp HTSEECCTTCCC------CCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHH------TCSEEECC
T ss_pred hcceeeccCCCC------CCHHHHHHHHhhhhcCcccCCCcccccCCchHHHHHHHHHHHHHHHHh------CCCcceEE
Confidence 578999988733 2799999999988643334565422 4342 333 555665 33444455
Q ss_pred EecCHHHHHHHHHHHhcCCCCEEEecCCCccchH---HHHhhCCCeEEEeeccC-CCCcccCHHHHHHhhcC-CceEEEE
Q 014603 115 LTLGCTQAIEVILTVLARPGANILLPRPGFPYYE---ARATHSHLEVRHFDLLP-AKGWEVDLDAVEALADE-NTVALVI 189 (422)
Q Consensus 115 ~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~---~~~~~~g~~~~~~~~~~-~~~~~~d~~~l~~~~~~-~~~~i~i 189 (422)
+++ |++|+..++.+++++||+|+++.|+|+++. ..+...|..+..++... .+++.+|++.+++.+++ +++++++
T Consensus 91 ~~s-Gt~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~ 169 (407)
T 2dkj_A 91 PHS-GSQANMAVYMALMEPGDTLMGMDLAAGGHLTHGSRVNFSGKLYKVVSYGVRPDTELIDLEEVRRLALEHRPKVIVA 169 (407)
T ss_dssp CSS-HHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHHSEEEEECCCTTTSSCCHHHHHHHHHHHCCSEEEE
T ss_pred ecc-hHHHHHHHHHHhcCCCCEEEEecccccCccchHHHHHhcCceEEEEecCCCcccCccCHHHHHHHHhhcCCeEEEE
Confidence 555 566999999999999999999999998873 44444555333444321 23567899999998874 7888888
Q ss_pred eCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccc-cccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEE
Q 014603 190 INPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDH-LAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLV 268 (422)
Q Consensus 190 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~-~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~ 268 (422)
++|+|| ... ++++|.++|+++|+++|+|++|+. +.+.+.....+ . ...+++.|+||++ +|+|+||++
T Consensus 170 ~~p~~~--~~~---~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~---~--~~di~~~s~sK~l--~g~~~G~~~ 237 (407)
T 2dkj_A 170 GASAYP--RFW---DFKAFREIADEVGAYLVVDMAHFAGLVAAGLHPNPL---P--YAHVVTSTTHKTL--RGPRGGLIL 237 (407)
T ss_dssp CCSSCC--SCC---CHHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCCCT---T--TCSEEEEESSGGG--CCCSCEEEE
T ss_pred eccccC--CCC---CHHHHHHHHHHcCCEEEEEccccccccccCccCCcc---c--cccEEEEeccccC--CCCCceEEE
Confidence 899997 443 488999999999999999999987 44444322111 1 1348899999964 578899999
Q ss_pred eeCCCCcccchhHHHHHHhhhhh--ccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC
Q 014603 269 TSDPNGILQDSGIVDSIKSFLNI--SSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPE 346 (422)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~ 346 (422)
+++ +++.+.+...... .++++.....++.++++.....++++..++++++++++.+.|+++ ++.+...+.
T Consensus 238 ~~~-------~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~ 309 (407)
T 2dkj_A 238 SND-------PELGKRIDKLIFPGIQGGPLEHVIAGKAVAFFEALQPEFKEYSRLVVENAKRLAEELARR-GYRIVTGGT 309 (407)
T ss_dssp ESC-------HHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSC
T ss_pred ECC-------HHHHHHHHhhhcccccCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhC-CceeecCCC
Confidence 863 3677777665422 234455445566667765334677889999999999999999988 776332245
Q ss_pred CceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCC------CCCCeEEEEec------cChHHHHHHHHHHHHH
Q 014603 347 GSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITV------GLKDWLRITFA------VEPSALEDGLGRMKAF 414 (422)
Q Consensus 347 ~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~------~~~~~iRis~~------~~~~~l~~~~~~l~~~ 414 (422)
.+.++|+.++... .+..++...+ .++||.+.+|..+ ..++++|++++ .+++++++++++|+++
T Consensus 310 ~~~~~~~~~~~~~----~~~~~~~~~l-~~~gi~v~~~~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~ 384 (407)
T 2dkj_A 310 DNHLFLVDLRPKG----LTGKEAEERL-DAVGITVNKNAIPFDPKPPRVTSGIRIGTPAITTRGFTPEEMPLVAELIDRA 384 (407)
T ss_dssp SSSEEEEECGGGT----CCHHHHHHHH-HHTTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCGGGHHHHHHHHHHH
T ss_pred CceEEEEECcccC----CCHHHHHHHH-HHcCceecCCcCccccccccCCCceeeecccccccCCCHHHHHHHHHHHHHH
Confidence 6888999886421 1455666655 6779999998753 23578999995 6899999999999999
Q ss_pred HHH
Q 014603 415 YDR 417 (422)
Q Consensus 415 ~~~ 417 (422)
+++
T Consensus 385 ~~~ 387 (407)
T 2dkj_A 385 LLE 387 (407)
T ss_dssp HHH
T ss_pred Hhc
Confidence 876
No 138
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=100.00 E-value=3.4e-31 Score=254.90 Aligned_cols=335 Identities=13% Similarity=0.106 Sum_probs=224.6
Q ss_pred CCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCC---------CCHHHHHHHHHHHhhcCCCCCCCCCEE
Q 014603 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTV---------GILPARRAIADYLNRDLPYKLSPDDVY 114 (422)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~---------g~~~lr~~ia~~l~~~~~~~~~~~~i~ 114 (422)
..+.++|+.+.+. ++++.+.+++.+.+.. ...|+... ...++|+++++++ ++++++|+
T Consensus 16 ~~~~~~Ld~~~~~-----~~~~~v~~a~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~v~ 82 (432)
T 3a9z_A 16 PNRKVYMDYNATT-----PLEPEVIQAVTEAMKE--AWGNPSSSYVAGRKAKDIINTARASLAKMI------GGKPQDII 82 (432)
T ss_dssp --CCEECBTTTCC-----CCCHHHHHHHHHHHHH--CCSCTTCSSHHHHHHHHHHHHHHHHHHHHH------TCCGGGEE
T ss_pred CCCcEEeeCCccC-----CCCHHHHHHHHHHHHH--hcCCCccCcHHHHHHHHHHHHHHHHHHHHc------CCCcCeEE
Confidence 4567889888744 6678999999998865 22333211 2368999999998 45678999
Q ss_pred EecCHHHHHHHHHHHhc--------CCCCEEEecCCCccch-----------------HHHHhhCCCeEEEeeccCCCCc
Q 014603 115 LTLGCTQAIEVILTVLA--------RPGANILLPRPGFPYY-----------------EARATHSHLEVRHFDLLPAKGW 169 (422)
Q Consensus 115 ~~~g~~~a~~~~~~~l~--------~~gd~Vl~~~~~~~~~-----------------~~~~~~~g~~~~~~~~~~~~~~ 169 (422)
+|+|++++++.++.+++ ++||+|+++.|+|+.+ ...++..|.+++.++.++ .++
T Consensus 83 ~~~g~t~a~~~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~~v~~v~~~~-~~~ 161 (432)
T 3a9z_A 83 FTSGGTESNNLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSK-VNG 161 (432)
T ss_dssp EESCHHHHHHHHHHHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHHHHHHTTSCEEEEECCCT-TTS
T ss_pred EeCChHHHHHHHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCcEEEEEecCc-ccC
Confidence 99999999999999886 5899999999999765 334455789999998764 234
Q ss_pred ccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcC----------cEEEEcccccccccCCCCCCCcc
Q 014603 170 EVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLG----------IMVIADEVYDHLAFGNTPFVPMG 239 (422)
Q Consensus 170 ~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~----------~~li~D~~~~~~~~~~~~~~~~~ 239 (422)
.+|++.|++.++++++++++++|+||||.+++. ++|.++|+++| +++|+|++|+.. ....++.
T Consensus 162 ~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~---~~i~~l~~~~~~~~~~~~~~~~~livDea~~~~----~~~~~~~ 234 (432)
T 3a9z_A 162 QVEVEDILAAVRPTTCLVTIMLANNETGVIMPI---SEISRRIKALNQIRAASGLPRVLVHTDAAQALG----KRRVDVE 234 (432)
T ss_dssp SCCHHHHHHTCCTTEEEEECCSBCTTTCBBCCH---HHHHHHHHHHHHHHHHHTCCCCEEEEECTTTTT----TSCCCHH
T ss_pred CcCHHHHHHhccCCceEEEEECcccCcccccCH---HHHHHHHHhcCcccccccCCceEEEEEchhhhC----CcccChh
Confidence 689999999998889999999999999999874 56788888999 999999999752 2222333
Q ss_pred ccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHh--------hhhhccCcchHHHHHHHHHHhhch
Q 014603 240 VFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKS--------FLNISSDPATFIQGAVPQILEKTE 311 (422)
Q Consensus 240 ~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~a~~~~l~~~~ 311 (422)
....+ +++.|+||++ |+|+||+++++... ...+.. .....++++...+.++.++++..
T Consensus 235 ~~~~d---~~~~s~~K~~---g~~~G~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aal~~~- 300 (432)
T 3a9z_A 235 DLGVD---FLTIVGHKFY---GPRIGALYVRGVGK-------LTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAADLV- 300 (432)
T ss_dssp HHCCS---EEEEEGGGTT---CCSCEEEEETTBTT-------TBCCCCSCCSSCGGGGTSCSCCCHHHHHHHHHHHHHH-
T ss_pred hcCCC---EEEEehhHhc---CCcceEEEEccccc-------cCCcCceeecCCccccccCCCcCHHHHHHHHHHHHHH-
Confidence 33332 6689999986 35699999974210 111111 11123466777787877777743
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC-CCC-----CCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCC
Q 014603 312 EEFFSKITDILRETADICCDRLKEIPCITCP-KKP-----EGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGI 385 (422)
Q Consensus 312 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~-----~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~ 385 (422)
+.++++..++++++++++.+.|++++++.+. ..| ..+...++.++... .+..++...+ .++.+.+|.
T Consensus 301 ~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l---~~i~~~~G~ 373 (432)
T 3a9z_A 301 SENCETYEAHMRDIRDYLEERLEAEFGKRIHLNSRFPGVERLPNTCNFSIQGSQ----LRGYMVLAQC---QTLLASVGA 373 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHGGGEEESSCCTTCCBCTTEEEEEECSTT----CCHHHHHHHC---SSEECBSSC
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHhccCCcEEEeCCCCcccCCCCEEEEEeCCCC----CcHHHHHHHh---cCeEEeccc
Confidence 3467888899999999999999886454311 122 12334445554310 1344444432 377777765
Q ss_pred CC---------------CC-----CCeEEEEec--cChHHHHHHHHHHHHHHHHhcc
Q 014603 386 TV---------------GL-----KDWLRITFA--VEPSALEDGLGRMKAFYDRHAK 420 (422)
Q Consensus 386 ~~---------------~~-----~~~iRis~~--~~~~~l~~~~~~l~~~~~~~~~ 420 (422)
.| +. .+++||+++ ++++++++++++|+++++++++
T Consensus 374 ~~~~~~~~~~~~~l~~~g~~~~~~~~~iRis~~~~~t~eei~~~~~~l~~~~~~~~~ 430 (432)
T 3a9z_A 374 SCHSDHEDRPSPVLLSCGIPVDVARNAVRLSVGRSTTRAEVDLIVQDLKQAVNQLEG 430 (432)
T ss_dssp GGGGGGTTSCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHS
T ss_pred cccCCCCCCccHHHHhcCCCccccCceEEEEcCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 43 21 378999998 4899999999999999887643
No 139
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=100.00 E-value=3.4e-31 Score=252.09 Aligned_cols=326 Identities=17% Similarity=0.156 Sum_probs=241.8
Q ss_pred CCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHH
Q 014603 45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIE 124 (422)
Q Consensus 45 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~ 124 (422)
.+++||+.|.+. + ++.+.+++.+++... .|.+..+..++|++++++++ . +++++++||++|+.
T Consensus 30 ~~~id~~~~~~~----~--~~~v~~a~~~~~~~~---~y~~~~~~~~l~~~la~~~~------~--~~~v~~~~Gt~a~~ 92 (399)
T 2oga_A 30 VPFLDLKAAYEE----L--RAETDAAIARVLDSG---RYLLGPELEGFEAEFAAYCE------T--DHAVGVNSGMDALQ 92 (399)
T ss_dssp BCSCCHHHHHHH----T--HHHHHHHHHHHHHHT---CCSSSHHHHHHHHHHHHHTT------S--SEEEEESCHHHHHH
T ss_pred CcccccCcCCCC----C--CHHHHHHHHHHHhcC---CCCCchhHHHHHHHHHHHHC------C--CeEEEecCHHHHHH
Confidence 578999988744 2 389999999988652 56665678899999999983 2 36788888999999
Q ss_pred HHHHHh-cCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHH
Q 014603 125 VILTVL-ARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQ 203 (422)
Q Consensus 125 ~~~~~l-~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~ 203 (422)
.++.++ +++||+|+++.|+|+++...++..|.+++.++.++ +++.+|++.|++.+++++++++ ++||||...+
T Consensus 93 ~~l~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~v~---~~n~tG~~~~-- 166 (399)
T 2oga_A 93 LALRGLGIGPGDEVIVPSHTYIASWLAVSATGATPVPVEPHE-DHPTLDPLLVEKAITPRTRALL---PVHLYGHPAD-- 166 (399)
T ss_dssp HHHHHTTCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECBCS-SSSSBCHHHHHHHCCTTEEEEC---CBCGGGCCCC--
T ss_pred HHHHHhCCCCcCEEEECCCccHHHHHHHHHCCCEEEEEecCC-CCCCcCHHHHHHhcCCCCeEEE---EeCCcCCccC--
Confidence 999999 89999999999999999999999999999998864 3467899999999987777665 5789999854
Q ss_pred HHHHHHHHHHHcCcEEEEcccccccc-cCCCCCCCccccCCCCCeEEEecC--ccccCCCCceeEEEEeeCCCCcccchh
Q 014603 204 HLQKIAETAKKLGIMVIADEVYDHLA-FGNTPFVPMGVFGSIVPVLTLGSI--SKRWIVPGWRLGWLVTSDPNGILQDSG 280 (422)
Q Consensus 204 ~l~~i~~~~~~~~~~li~D~~~~~~~-~~~~~~~~~~~~~~~~~~i~i~s~--sK~~~~~G~r~G~~~~~~~~~~~~~~~ 280 (422)
+++|.++|+++|+++|+|++|+.+. +++. .+..+ . .+++.|+ ||.++.+| |+|++++++ ++
T Consensus 167 -l~~i~~l~~~~~~~li~Dea~~~g~~~~~~---~~~~~-~---di~~~S~~~sK~~~~~G-~~g~~~~~~-------~~ 230 (399)
T 2oga_A 167 -MDALRELADRHGLHIVEDAAQAHGARYRGR---RIGAG-S---SVAAFSFYPGKNLGCFG-DGGAVVTGD-------PE 230 (399)
T ss_dssp -HHHHHHHHHHHTCEECEECTTCTTCEETTE---ETTCT-T---CEEEEECCTTSSSCCSS-CCEEEEESC-------HH
T ss_pred -HHHHHHHHHHcCCEEEEECcccccCccCCe---ecccc-c---CEEEEeCCCCccCCcCC-ceEEEEeCC-------HH
Confidence 7888999999999999999998642 3222 11111 1 2888888 79988878 999999853 46
Q ss_pred HHHHHHhhhhh-------------ccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCC
Q 014603 281 IVDSIKSFLNI-------------SSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEG 347 (422)
Q Consensus 281 ~~~~~~~~~~~-------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~ 347 (422)
+.+++...... ....+.+.++++.+.++. +++..++.+++.+.+.+.|++++++.+...|..
T Consensus 231 ~~~~l~~~~~~g~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~-----~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~ 305 (399)
T 2oga_A 231 LAERLRMLRNYGSRQKYSHETKGTNSRLDEMQAAVLRIRLAH-----LDSWNGRRSALAAEYLSGLAGLPGIGLPVTAPD 305 (399)
T ss_dssp HHHHHHHHHBTTCSSTTCCCSCCCBCCCCHHHHHHHHHHHHT-----HHHHHHHHHHHHHHHHHHTTTCTTCBCCCCCTT
T ss_pred HHHHHHHHHhcCccccccccccccCCCcCHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHhccCCCccccCCCCC
Confidence 77776654321 113456666666666654 344566677778889999998888774434555
Q ss_pred ceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCC-----------CC------------CCeEEEEec--cChH
Q 014603 348 SMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITV-----------GL------------KDWLRITFA--VEPS 402 (422)
Q Consensus 348 g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~-----------~~------------~~~iRis~~--~~~~ 402 (422)
+.++|+.++... .+..++...| .++||.+.++... +. .+++||+++ ++++
T Consensus 306 ~~~~~~~~~~~~----~~~~~l~~~L-~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lRi~~~~~~t~e 380 (399)
T 2oga_A 306 TDPVWHLFTVRT----ERRDELRSHL-DARGIDTLTHYPVPVHLSPAYAGEAPPEGSLPRAESFARQVLSLPIGPHLERP 380 (399)
T ss_dssp EECCCSSEEEEC----SSHHHHHHHH-HHTTBCCBCSCSSCGGGSHHHHTTSCCTTSCHHHHHHHHHEEEECCSTTCCHH
T ss_pred CcceeEEEEEEC----CCHHHHHHHH-HHCCCceecCCCCccccchhhcccCCCCCCChhHHHHHhCEEEccCCCCCCHH
Confidence 555553332110 1456666666 5579999875421 00 257999997 6899
Q ss_pred HHHHHHHHHHHHHHHhc
Q 014603 403 ALEDGLGRMKAFYDRHA 419 (422)
Q Consensus 403 ~l~~~~~~l~~~~~~~~ 419 (422)
+++++++.|+++++++.
T Consensus 381 di~~~~~~l~~~~~~l~ 397 (399)
T 2oga_A 381 QALRVIDAVREWAERVD 397 (399)
T ss_dssp HHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 99999999999987654
No 140
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=100.00 E-value=1.1e-31 Score=259.15 Aligned_cols=353 Identities=17% Similarity=0.092 Sum_probs=230.1
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 122 (422)
+|+.++||..|.+....+ +.+|.+.+++.+++... ..|....+..+.+..+++++.+..+. ...+++++|+||++|
T Consensus 59 ~g~~ylD~~~~~~~~~lG-h~~p~v~~A~~~~~~~~--~~~~~~~~~~~~~~~la~~l~~~~~~-~~~~~v~~~~sGseA 134 (451)
T 3oks_A 59 DGNRLIDLGSGIAVTTVG-NSAPKVVEAVRSQVGDF--THTCFMVTPYEGYVAVCEQLNRLTPV-RGDKRSALFNSGSEA 134 (451)
T ss_dssp TSCEEEESSHHHHTCTTC-TTCHHHHHHHHHHHTTC--SCCTTTTSCCHHHHHHHHHHHHHSSC-CSSEEEEEESSHHHH
T ss_pred CCCEEEEcCCCccccccC-CCCHHHHHHHHHHHHhc--ccccCCccCCHHHHHHHHHHHHhCCc-CCCCEEEEeCcHHHH
Confidence 477789999875442222 34899999999998763 23444344556777777777665441 235789999999999
Q ss_pred HHHHHHHhcC--CCCEEEecCCCccchHHHHhhCCC--------------eEEEeeccCC--------CCcc---cCHHH
Q 014603 123 IEVILTVLAR--PGANILLPRPGFPYYEARATHSHL--------------EVRHFDLLPA--------KGWE---VDLDA 175 (422)
Q Consensus 123 ~~~~~~~l~~--~gd~Vl~~~~~~~~~~~~~~~~g~--------------~~~~~~~~~~--------~~~~---~d~~~ 175 (422)
++.+++.+.. .++.|++.+++|+++...+...+. .+..++.... +..+ .+++.
T Consensus 135 ~~~Alk~a~~~~g~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 214 (451)
T 3oks_A 135 VENAVKIARSHTHKPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAKR 214 (451)
T ss_dssp HHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHH
T ss_pred HHHHHHHHHHhcCCCeEEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccccchhhHHHHHH
Confidence 9999987653 448999999999987655543321 3445544210 0000 12333
Q ss_pred HHHhh----cCCceEEEEeCCCCCcc--cccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEE
Q 014603 176 VEALA----DENTVALVIINPGNPCG--NVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLT 249 (422)
Q Consensus 176 l~~~~----~~~~~~i~i~~p~nptG--~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~ 249 (422)
+++.+ .+++.++++++|.|++| ..++.+.+++|.++|++||+++|+||+|.++.++|.. ..+..++..++
T Consensus 215 ~~~~l~~~~~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~-~~~~~~~~~pd--- 290 (451)
T 3oks_A 215 AITVIDKQIGADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTGAM-FACEHEGIDPD--- 290 (451)
T ss_dssp HHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSS-SGGGGGTCCCS---
T ss_pred HHHHHHhhcCCCCEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCccccc-hhhhhcCCCCC---
Confidence 33333 34667788888866655 3457777999999999999999999999987766642 22333333223
Q ss_pred EecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhh-hhccCcchHHHHHHHHHHhhchH-HHHHHHHHHHHHHHH
Q 014603 250 LGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQGAVPQILEKTEE-EFFSKITDILRETAD 327 (422)
Q Consensus 250 i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~ 327 (422)
+.|+||.++. |+|+||++++ +++++.+.... ..+.+.++++++++.++|+...+ ...++.++.....++
T Consensus 291 i~t~sK~l~~-G~~iG~v~~~--------~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~ 361 (451)
T 3oks_A 291 LIVTAKGIAG-GLPLSAVTGR--------AEIMDSPHVSGLGGTYGGNPIACAAALATIETIESEGLVARAQQIEKIMKD 361 (451)
T ss_dssp EEEECGGGGT-TSSCEEEEEE--------HHHHTCSCTTSBCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred eeeehhhhhC-CcceEEEEEC--------HHHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 3378999855 9999999986 46766665433 33457788999999999875332 233444444444444
Q ss_pred HHHHHhhcCCCCCCCCCCCCceEEEEecCcccc--cCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHH
Q 014603 328 ICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLL--EGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSA 403 (422)
Q Consensus 328 ~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~ 403 (422)
.+.+.++++|.+. . .+..|.++++.+..... +......++...+ .++||.+.|+..+ .+++|++++ .++++
T Consensus 362 ~L~~~~~~~~~~~-~-~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~~~~--~~~iRi~~~~~~t~e~ 436 (451)
T 3oks_A 362 RLGRLQAEDDRIG-D-VRGRGAMIAMELVKAGTTEPDADLTKALCAGA-HAAGVIVLSCGTY--GNVVRFLPPLSIGDDL 436 (451)
T ss_dssp HHHHHHHHCTTEE-E-EEEETTEEEEEEBSTTSCCBCHHHHHHHHHHH-HHTTEECEEECTT--SCEEEECCCTTCCHHH
T ss_pred HHHHHHhhCCCeE-E-EEEeeEEEEEEEecCccCCCCHHHHHHHHHHH-HhCCcEEecCCCC--CCEEEEECCCCCCHHH
Confidence 4544445555443 2 23346688887732000 0000234455554 5669999997654 378999876 68999
Q ss_pred HHHHHHHHHHHHHH
Q 014603 404 LEDGLGRMKAFYDR 417 (422)
Q Consensus 404 l~~~~~~l~~~~~~ 417 (422)
+++++++|++++++
T Consensus 437 i~~~l~~l~~~l~~ 450 (451)
T 3oks_A 437 LNEGLDVLEEVLRG 450 (451)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999998864
No 141
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=100.00 E-value=1.2e-31 Score=258.06 Aligned_cols=346 Identities=14% Similarity=0.058 Sum_probs=225.5
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 122 (422)
+|+.++||..+......+ ..+|.+.+++.+++.......|+ .....++++++++++ + ++++|++++||++|
T Consensus 53 ~g~~ylD~~~~~~~~~lG-~~~p~v~~a~~~~~~~~~~~~~~-~~~~~~l~~~la~~~------~-~~~~v~~~~sGsea 123 (434)
T 3l44_A 53 DGNKYIDYLAAYGPIITG-HAHPHITKAITTAAENGVLYGTP-TALEVKFAKMLKEAM------P-ALDKVRFVNSGTEA 123 (434)
T ss_dssp TCCEEEECCGGGTTCSSC-BTCHHHHHHHHHHHHHCSCCSSC-CHHHHHHHHHHHHHC------T-TCSEEEEESSHHHH
T ss_pred CCCEEEECCCchhccccC-CCCHHHHHHHHHHHHhCcCCCCC-CHHHHHHHHHHHHhC------C-CCCEEEEeCchHHH
Confidence 588899999887543222 25899999999998764333443 334567777777765 2 57899999999999
Q ss_pred HHHHHHHhcC--CCCEEEecCCCccchHHHHhhCCC-eEEEeeccCCCCc--------c----cCHHHHHHhhcC--Cce
Q 014603 123 IEVILTVLAR--PGANILLPRPGFPYYEARATHSHL-EVRHFDLLPAKGW--------E----VDLDAVEALADE--NTV 185 (422)
Q Consensus 123 ~~~~~~~l~~--~gd~Vl~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~--------~----~d~~~l~~~~~~--~~~ 185 (422)
++.+++.+.. ++++|++.+|+|+++...+...+. ...........+. . -|++.|++.+++ ...
T Consensus 124 ~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~ 203 (434)
T 3l44_A 124 VMTTIRVARAYTGRTKIMKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPQSIAQEVITVPFNNVETLKEALDKWGHEV 203 (434)
T ss_dssp HHHHHHHHHHHHCCCEEEEETTCCCCSSGGGGBC-------CCCBSSTTCCHHHHTTEEEECTTCHHHHHHHHHHHGGGE
T ss_pred HHHHHHHHHHhhCCCEEEEEcCccCCCcHHHHhhcCCcccccCCCCcCCCCCcCCCceEecCcccHHHHHHHHHhCCCCE
Confidence 9999987754 678999999999987654443322 1111111000000 0 178899888763 345
Q ss_pred EEEEeCCC-CCccccc-CHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCce
Q 014603 186 ALVIINPG-NPCGNVY-TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWR 263 (422)
Q Consensus 186 ~i~i~~p~-nptG~~~-~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r 263 (422)
++++++|. |++|.+. +.+++++|.++|++||+++|+||+|.++ +.|... .+..++...+ +.|+||.++ +|+|
T Consensus 204 ~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~-~~g~~~-~~~~~~~~~d---i~t~sK~~~-~G~~ 277 (434)
T 3l44_A 204 AAILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAF-RFMYGG-AQDLLGVTPD---LTALGKVIG-GGLP 277 (434)
T ss_dssp EEEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTT-TSSSSC-HHHHHTCCCS---EEEEEGGGG-TTSS
T ss_pred EEEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccce-eccccH-HHHHcCCCCC---eeehhhhhc-CCcC
Confidence 56666674 5566554 8888999999999999999999999987 554321 1222222222 447889986 7999
Q ss_pred eEEEEeeCCCCcccchhHHHHHHhh----hhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhc----
Q 014603 264 LGWLVTSDPNGILQDSGIVDSIKSF----LNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKE---- 335 (422)
Q Consensus 264 ~G~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~---- 335 (422)
+||++++ +++++.+... ...+.++++++++++.++|+...+ ++..++++++.+.+++.|++
T Consensus 278 iG~~~~~--------~~i~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~ 346 (434)
T 3l44_A 278 IGAYGGK--------KEIMEQVAPLGPAYQAGTMAGNPASMASGIACLEVLQQ---EGLYEKLDELGATLEKGILEQAAK 346 (434)
T ss_dssp CEEEEEC--------HHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTS---TTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeeEEEc--------HHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHc---ccHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999885 4677666542 223457788999999888875321 23334444444444444443
Q ss_pred CCCCCCCCCCCCceEEEEecCccccc--------CCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEeccChHHHHHH
Q 014603 336 IPCITCPKKPEGSMFVMVKLNYSLLE--------GINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALEDG 407 (422)
Q Consensus 336 ~~~~~~~~~~~~g~~~~~~~~~~~~~--------~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~l~~~ 407 (422)
++.+. . .+..|.++++.+...... ......++...+ .++||.+.|+. .+.+|+++.+++++++++
T Consensus 347 ~~~~~-~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~~----~~~~rl~~~~t~e~i~~~ 419 (434)
T 3l44_A 347 HNIDI-T-LNRLKGALTVYFTTNTIEDYDAAQDTDGEMFGKFFKLM-LQEGVNLAPSK----YEAWFLTTEHTKEDIEYT 419 (434)
T ss_dssp TTCCE-E-EEEETTEEEEEESSSCCCSHHHHHHSCHHHHHHHHHHH-HHTTEECCSST----TCCEECCTTCCHHHHHHH
T ss_pred CCCCE-E-EEeeccEEEEEEecCcccchhhccccCHHHHHHHHHHH-HHCCeEEeecC----CCcEEEecccCHHHHHHH
Confidence 43222 2 234466777766321100 000123455555 55699999875 356899877899999999
Q ss_pred HHHHHHHHHHhccc
Q 014603 408 LGRMKAFYDRHAKK 421 (422)
Q Consensus 408 ~~~l~~~~~~~~~~ 421 (422)
+++|+++++++.++
T Consensus 420 l~~l~~~l~~~~~~ 433 (434)
T 3l44_A 420 IEAVGRAFAALADN 433 (434)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999887553
No 142
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=100.00 E-value=2.4e-31 Score=251.90 Aligned_cols=329 Identities=15% Similarity=0.132 Sum_probs=237.0
Q ss_pred CCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCC--CCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHH
Q 014603 45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSST--VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (422)
Q Consensus 45 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~--~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 122 (422)
+..+.|+-|. .++++++.+++.+.... .|.+. ....++++.++++++... ++++++|++|+|++++
T Consensus 4 ~~~~~~~p~p------~~~~~~v~~a~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~v~~~~g~t~a 71 (385)
T 2bkw_A 4 SVDTLLIPGP------IILSGAVQKALDVPSLG----HTSPEFVSIFQRVLKNTRAVFKSAA--ASKSQPFVLAGSGTLG 71 (385)
T ss_dssp CCCEECSSSS------CCCCHHHHHTTSCCCCC----TTSHHHHHHHHHHHHHHHHHTTCCG--GGTCEEEEEESCTTHH
T ss_pred ccceeecCCC------cCchHHHHHHHhccccc----cCCHHHHHHHHHHHHHHHHHhCCCC--CCCCceEEEcCchHHH
Confidence 4446676664 35668888887665432 22221 235678888898886532 3457899999999999
Q ss_pred HHHHHHHhc---CCCCEEEec-CCCccch-HHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC-CceEEEEeCCCCCc
Q 014603 123 IEVILTVLA---RPGANILLP-RPGFPYY-EARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE-NTVALVIINPGNPC 196 (422)
Q Consensus 123 ~~~~~~~l~---~~gd~Vl~~-~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~i~~p~npt 196 (422)
++.++.++. ++||+|+++ .+.|+.. ...++..|.+++.++.. +.++.+|++.|++.+++ +++++++++|+|||
T Consensus 72 l~~~~~~~~~~~~~gd~vlv~~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~~~d~~~l~~~l~~~~~~~v~~~~~~npt 150 (385)
T 2bkw_A 72 WDIFASNFILSKAPNKNVLVVSTGTFSDRFADCLRSYGAQVDVVRPL-KIGESVPLELITEKLSQNSYGAVTVTHVDTST 150 (385)
T ss_dssp HHHHHHHHSCTTCSCCEEEEECSSHHHHHHHHHHHHTTCEEEEECCS-STTSCCCHHHHHHHHHHSCCSEEEEESEETTT
T ss_pred HHHHHHHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCceEEEecC-CCCCCCCHHHHHHHHhcCCCCEEEEEccCCCc
Confidence 999999997 899999888 5566555 36677789999988872 23456899999998876 78999999999999
Q ss_pred ccccCHHHHHHHHHHHHHc--CcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccC-CCCceeEEEEeeCCC
Q 014603 197 GNVYTYQHLQKIAETAKKL--GIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWI-VPGWRLGWLVTSDPN 273 (422)
Q Consensus 197 G~~~~~~~l~~i~~~~~~~--~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~-~~G~r~G~~~~~~~~ 273 (422)
|.+++ +++|.++|+++ |+++|+|++|+.. ....++..++ ..+++.|+||+++ ++| +|++++++
T Consensus 151 G~~~~---l~~i~~~~~~~~~~~~li~D~a~~~~----~~~~~~~~~~---~d~~~~s~~K~~~~~~G--~G~~~~~~-- 216 (385)
T 2bkw_A 151 AVLSD---LKAISQAIKQTSPETFFVVDAVCSIG----CEEFEFDEWG---VDFALTASQKAIGAPAG--LSISLCSS-- 216 (385)
T ss_dssp TEECC---HHHHHHHHHHHCTTSEEEEECTTTTT----TSCCCTTTTT---CSEEEEESSSTTCCCSC--EEEEEECH--
T ss_pred CeEcC---HHHHHHHHHhhCCCCEEEEECccccC----CccccccccC---ceEEEecCccccccCCc--ceEEEEcH--
Confidence 99976 67888999999 9999999999742 2122233332 2488899999654 466 59999863
Q ss_pred CcccchhHHH-HHH------------------h----hhhh----ccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHH
Q 014603 274 GILQDSGIVD-SIK------------------S----FLNI----SSDPATFIQGAVPQILEKTEEEFFSKITDILRETA 326 (422)
Q Consensus 274 ~~~~~~~~~~-~~~------------------~----~~~~----~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 326 (422)
++++ ++. . .... .++++...+.++.++++...+..+++.++++++++
T Consensus 217 ------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~ 290 (385)
T 2bkw_A 217 ------RFMDYALNDSKNGHVHGYFSSLRRWTPIMENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHREMS 290 (385)
T ss_dssp ------HHHHHHTCHHHHCCCSCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred ------HHHHHHHhhccCCCCCceeecHHHHhhHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHH
Confidence 3444 321 1 1110 13567777777777776533334778889999999
Q ss_pred HHHHHHh-hcCCCCCCCCCC-----CCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC-CCeEEEE-ec
Q 014603 327 DICCDRL-KEIPCITCPKKP-----EGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL-KDWLRIT-FA 398 (422)
Q Consensus 327 ~~l~~~L-~~~~~~~~~~~~-----~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~-~~~iRis-~~ 398 (422)
+.+.+.| +++ ++.+. .+ ..+.++++.++ +..++...+ .++||.+.+|..+.. .+++||+ ++
T Consensus 291 ~~l~~~L~~~~-g~~~~-~~~~~~~~~~~~~~~~~~--------~~~~~~~~l-~~~gi~v~~g~~~~~~~~~iRis~~~ 359 (385)
T 2bkw_A 291 DWFKDSLVNGL-QLTSV-SRYPSNMSAHGLTAVYVA--------DPPDVIAFL-KSHGVVIAGGIHKDIGPKYIRIGHMG 359 (385)
T ss_dssp HHHHHHHHTTT-CCEES-SCSSSTTBCSSCEEEECS--------CHHHHHHHH-HHTTEECBCCCCTTTGGGEEEECCCG
T ss_pred HHHHHHHHHhc-Cceec-ccCcccccCCceEEEecC--------CHHHHHHHH-HHCCeEEeCCCCcccCCCEEEEEccc
Confidence 9999999 887 76633 32 24678888875 245666666 567999999876532 5789999 65
Q ss_pred -----cChHHHHHHHHHHHHHHHH
Q 014603 399 -----VEPSALEDGLGRMKAFYDR 417 (422)
Q Consensus 399 -----~~~~~l~~~~~~l~~~~~~ 417 (422)
++++++++++++|++++++
T Consensus 360 ~~~~~~~~e~i~~~~~~l~~~~~~ 383 (385)
T 2bkw_A 360 VTACNKNLPYMKNCFDLIKLALQR 383 (385)
T ss_dssp GGTSSTTCTHHHHHHHHHHHHTTC
T ss_pred cccccCCHHHHHHHHHHHHHHHHh
Confidence 4889999999999988754
No 143
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.98 E-value=3.5e-30 Score=244.28 Aligned_cols=314 Identities=13% Similarity=0.131 Sum_probs=227.4
Q ss_pred HHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHh-cCCCCEEEecCCC
Q 014603 65 SVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVL-ARPGANILLPRPG 143 (422)
Q Consensus 65 ~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l-~~~gd~Vl~~~~~ 143 (422)
+++.+++.+.+.... ..|.+..+..++|++++++++ .+ +.|++++ |++|++.++.++ +++||+|+++.|+
T Consensus 17 ~~~~~a~~~~l~~~~-~~~~~~~~~~~l~~~la~~~~------~~-~~i~~~s-Gt~al~~~l~~l~~~~gd~Vi~~~~~ 87 (388)
T 1b9h_A 17 DAERNGLVRALEQGQ-WWRMGGDEVNSFEREFAAHHG------AA-HALAVTN-GTHALELALQVMGVGPGTEVIVPAFT 87 (388)
T ss_dssp HHHHHHHHHHHHTSC-CBTTTCSHHHHHHHHHHHHTT------CS-EEEEESC-HHHHHHHHHHHTTCCTTCEEEEESSS
T ss_pred HHHHHHHHHHHHcCC-eeecCCHHHHHHHHHHHHHhC------CC-eEEEeCC-HHHHHHHHHHHcCCCCcCEEEECCCc
Confidence 899999999987643 356666778999999999984 22 4555555 599999999999 8999999999999
Q ss_pred ccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcc
Q 014603 144 FPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADE 223 (422)
Q Consensus 144 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~ 223 (422)
|+++...++..|.+++.+++++ +++.+|++.|++.+++++++++ |+||||.+. ++++|.++|+++|+++|+|+
T Consensus 88 ~~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~v~---~~n~tG~~~---~l~~i~~la~~~~~~li~D~ 160 (388)
T 1b9h_A 88 FISSSQAAQRLGAVTVPVDVDA-ATYNLDPEAVAAAVTPRTKVIM---PVHMAGLMA---DMDALAKISADTGVPLLQDA 160 (388)
T ss_dssp CTHHHHHHHHTTCEEEEECBCT-TTCCBCHHHHHHHCCTTEEEEC---CBCGGGCCC---CHHHHHHHHHHHTCCBCEEC
T ss_pred cHHHHHHHHHcCCEEEEEecCC-CcCCCCHHHHHHhcCcCceEEE---EeCCccCcC---CHHHHHHHHHHcCCEEEEec
Confidence 9999999999999999999865 3467999999999987777665 999999985 57888899999999999999
Q ss_pred cccc-cccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhH--HHHHHhhhhh---------
Q 014603 224 VYDH-LAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGI--VDSIKSFLNI--------- 291 (422)
Q Consensus 224 ~~~~-~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~--~~~~~~~~~~--------- 291 (422)
+|+. ..+.+. ++..++ ++.+.||||..+++|.|+||+++++. .+ .+.+......
T Consensus 161 a~~~g~~~~~~---~~~~~~----~i~~~S~s~~K~l~g~~~G~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 226 (388)
T 1b9h_A 161 AHAHGARWQGK---RVGELD----SIATFSFQNGKLMTAGEGGAVVFPDG-------ETEKYETAFLRHSCGRPRDDRRY 226 (388)
T ss_dssp TTCTTCEETTE---EGGGSS----SCEEEECCTTSSSCSSSCEEEEECTT-------CHHHHHHHHHHTBTTCCTTCSSC
T ss_pred chhcCCccCCe---eccccc----ceEEEEccCCCcccCCCeEEEEECCH-------HHHHHHHHHHHHhCCCCccCccc
Confidence 9985 333322 222222 37788999666666778999998642 24 4444332210
Q ss_pred -------ccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC-----CCCceEEEEecCccc
Q 014603 292 -------SSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKK-----PEGSMFVMVKLNYSL 359 (422)
Q Consensus 292 -------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-----~~~g~~~~~~~~~~~ 359 (422)
+...+.+..+++...+ .++++..++++++++.+.+.|+++|++.+... +.+++++|+.++...
T Consensus 227 ~~~~~g~~~~~~~~~~a~~~~~~-----~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (388)
T 1b9h_A 227 FHKIAGSNMRLNEFSASVLRAQL-----ARLDEQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADRNSHYMAMFRIPGLT 301 (388)
T ss_dssp CCCSCCCBCBCBHHHHHHHHHHH-----TTHHHHHHHHHHHHHHHHHHHHTSTTCEECCCCTTCCBCCCSEEEEECTTCC
T ss_pred eeecccccCCcCHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhccCCCccccCCCcCCCccceEEEEEEeCCcC
Confidence 0113333333333333 33666778888899999999999888763321 345788999886410
Q ss_pred ccCCCCHHHHHHHHHHhcCeEEecCCCCC----------------------C-------CCeEEEEec--c-ChHHHHHH
Q 014603 360 LEGINSDMEFALKLAKEESVIVLPGITVG----------------------L-------KDWLRITFA--V-EPSALEDG 407 (422)
Q Consensus 360 ~~~~~~~~~~~~~l~~~~gi~v~~g~~~~----------------------~-------~~~iRis~~--~-~~~~l~~~ 407 (422)
..+..++...| .++||.+.++.... . .+.+|++++ + +++|++++
T Consensus 302 ---~~~~~~l~~~L-~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~t~edi~~~ 377 (388)
T 1b9h_A 302 ---EERRNALVDRL-VEAGLPAFAAFRAIYRTDAFWELGAPDESVDAIARRCPNTDAISSDCVWLHHRVLLAGEPELHAT 377 (388)
T ss_dssp ---HHHHHHHHHHH-HHTTCCEEECCCCGGGSHHHHHSSCCSSCHHHHHHTCHHHHHHHHHEEEEEGGGGGSCHHHHHHH
T ss_pred ---cccHHHHHHHH-HHCCCCcccccCccccChHhHhcCCCcccccccccCCHHHHHHHhCeEEecCCCCCCCHHHHHHH
Confidence 00244566665 45699998865321 0 135999997 6 89999999
Q ss_pred HHHHHHHHHH
Q 014603 408 LGRMKAFYDR 417 (422)
Q Consensus 408 ~~~l~~~~~~ 417 (422)
++.|++++++
T Consensus 378 ~~~l~~~~~~ 387 (388)
T 1b9h_A 378 AEIIADAVAR 387 (388)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhh
Confidence 9999998754
No 144
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.98 E-value=5.8e-30 Score=245.55 Aligned_cols=334 Identities=17% Similarity=0.182 Sum_probs=237.9
Q ss_pred CCCCce--eecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCC-CCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCH
Q 014603 43 DTRPLI--PLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSS-TVGILPARRAIADYLNRDLPYKLSPDDVYLTLGC 119 (422)
Q Consensus 43 ~~~~~i--~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~-~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~ 119 (422)
.|..++ +|+.|.|. +++|+.+.+++.+.+... .|++ ..+..++|++++++++ .+++++|+|+
T Consensus 12 gg~~~~~~~l~~~~p~----~~~p~~~~~a~~~~~~~~---~y~~~~~~~~~l~~~la~~~~--------~~~v~~~~gg 76 (424)
T 2po3_A 12 GGPAAFDQPLLVGRPN----RIDRARLYERLDRALDSQ---WLSNGGPLVREFEERVAGLAG--------VRHAVATCNA 76 (424)
T ss_dssp TCCCSCSSCEETTCCC----CCCHHHHHHHHHHHHHHT---CCSSSCHHHHHHHHHHHHHHT--------SSEEEEESCH
T ss_pred cCCccccccccccCCC----CCChHHHHHHHHHHHhcC---CcccCCHHHHHHHHHHHHHhC--------CCeEEEeCCH
Confidence 344444 68888866 577889999999888653 4776 6778999999999993 2589999999
Q ss_pred HHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccc
Q 014603 120 TQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNV 199 (422)
Q Consensus 120 ~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~ 199 (422)
+++++.++.++. +||+|+++.|+|+++...+...|.+++.+++++ +++.+|++.|++.++++++++++++ |+|..
T Consensus 77 t~al~~~l~~l~-~gd~Vlv~~~~~~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~v~~~~---~tG~~ 151 (424)
T 2po3_A 77 TAGLQLLAHAAG-LTGEVIMPSMTFAATPHALRWIGLTPVFADIDP-DTGNLDPDQVAAAVTPRTSAVVGVH---LWGRP 151 (424)
T ss_dssp HHHHHHHHHHHT-CCSEEEEESSSCTHHHHHHHHTTCEEEEECBCT-TTSSBCHHHHGGGCCTTEEEEEEEC---GGGCC
T ss_pred HHHHHHHHHHcC-CCCEEEECCCccHHHHHHHHHcCCEEEEEecCC-CcCCcCHHHHHHhhCcCCcEEEEEC---CCCCc
Confidence 999999999985 789999999999999999999999999998864 3567899999999888888888764 89987
Q ss_pred cCHHHHHHHHHHHHHcCcEEEEccccc-ccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccc
Q 014603 200 YTYQHLQKIAETAKKLGIMVIADEVYD-HLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQD 278 (422)
Q Consensus 200 ~~~~~l~~i~~~~~~~~~~li~D~~~~-~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~ 278 (422)
.++++|.++|+++|+++|+|++|+ ++.+++. ++..+. + +++.||||..+++|.|+||+++++
T Consensus 152 ---~~l~~i~~la~~~~~~li~Dea~~~g~~~~~~---~~~~~~---d-i~~~S~sk~K~l~~~~~G~~v~~~------- 214 (424)
T 2po3_A 152 ---CAADQLRKVADEHGLRLYFDAAHALGCAVDGR---PAGSLG---D-AEVFSFHATKAVNAFEGGAVVTDD------- 214 (424)
T ss_dssp ---CCHHHHHHHHHHTTCEEEEECTTCTTCEETTE---ETTSSS---S-EEEEECCTTSSSCCSSCEEEEESC-------
T ss_pred ---CCHHHHHHHHHHcCCEEEEECccccCCeECCe---eccccc---C-EEEEeCCCCCCccCCCCeEEEeCC-------
Confidence 578899999999999999999998 4555442 222221 2 889999966566778999999863
Q ss_pred hhHHHHHHhhhhhcc----------CcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCc
Q 014603 279 SGIVDSIKSFLNISS----------DPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGS 348 (422)
Q Consensus 279 ~~~~~~~~~~~~~~~----------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g 348 (422)
+++++++........ ....+.+.++..++.. ...+++..++.+++++.+.+.|++++++.+...|.++
T Consensus 215 ~~l~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~ 292 (424)
T 2po3_A 215 ADLAARIRALHNFGFDLPGGSPAGGTNAKMSEAAAAMGLTS--LDAFPEVIDRNRRNHAAYREHLADLPGVLVADHDRHG 292 (424)
T ss_dssp HHHHHHHHHHHBTTTTCTTCCTTCCCBCCCCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHTCSCTTEEECCGGGGS
T ss_pred HHHHHHHHHHHhcCccccccccccCcCCCcCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhccCCCccccCCCCCC
Confidence 457777765432110 0101122222222322 2346677788888889999999988787633223332
Q ss_pred ----eEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCC--------------CCC-------eEEEEec--cCh
Q 014603 349 ----MFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVG--------------LKD-------WLRITFA--VEP 401 (422)
Q Consensus 349 ----~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~--------------~~~-------~iRis~~--~~~ 401 (422)
.++++.++.... + .+..++...+ .++||.+.+..... .++ .+|+++. +++
T Consensus 293 ~~~~~~~~i~~~~~~~-~-~~~~~l~~~L-~~~gI~v~~~~~~~~~~~~~~~~~g~~~~~~~~r~~~~~l~l~~~~~~t~ 369 (424)
T 2po3_A 293 LNNHQYVIVEIDEATT-G-IHRDLVMEVL-KAEGVHTRAYFSPGCHELEPYRGQPHAPLPHTERLAARVLSLPTGTAIGD 369 (424)
T ss_dssp CCCCCCEEEEECHHHH-S-SCHHHHHHHH-HHTTEECBCTTCSCGGGSTTTTTSCCCCCHHHHHHHTTEEEECCSTTCCH
T ss_pred ccccEEEEEEECCccc-h-hhHHHHHHHH-HHCCCceecccCCccccchhhhhcCCCCChhHHHHhcCEEEeeCCCCCCH
Confidence 233355552100 0 1455666654 66799998732100 011 2777643 789
Q ss_pred HHHHHHHHHHHHHHHHh
Q 014603 402 SALEDGLGRMKAFYDRH 418 (422)
Q Consensus 402 ~~l~~~~~~l~~~~~~~ 418 (422)
+++++++++|.+++++.
T Consensus 370 e~i~~~~~~L~~~~~~~ 386 (424)
T 2po3_A 370 DDIRRVADLLRLCATRG 386 (424)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhh
Confidence 99999999999988664
No 145
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.98 E-value=8e-31 Score=251.75 Aligned_cols=334 Identities=15% Similarity=0.157 Sum_probs=222.2
Q ss_pred CCCCceeecCCCCCCCCCCC-CcHHHHHHHHHHhhCCCC--CCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCH
Q 014603 43 DTRPLIPLGHGDPSAFPSFR-TASVAVDAIVHSVRSARF--NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGC 119 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~-~~~~v~~a~~~~~~~~~~--~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~ 119 (422)
+|..++||..|... ..+. .+|.+.+++.+++..... ..| +.....++++.+++++ ..+++++++|+
T Consensus 63 ~G~~ylD~~~g~~~--~~lgh~~p~v~~ai~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~--------g~~~v~~~~sG 131 (433)
T 1z7d_A 63 NDKRYYDFLSAYSS--VNQGHCHPNILNAMINQAKNLTICSRAF-FSVPLGICERYLTNLL--------GYDKVLMMNTG 131 (433)
T ss_dssp TCCEEEESSHHHHT--TTTCBTCHHHHHHHHHHHTTCSCCCTTS-EEHHHHHHHHHHHHHH--------TCSEEEEESSH
T ss_pred CCCEEEEcccchhh--cccCCCCHHHHHHHHHHHHhCCCccCCc-CCHHHHHHHHHHHhhc--------CCCeEEEeCCH
Confidence 46778999886533 2244 789999999999876321 112 1223456666666665 25799999999
Q ss_pred HHHHHHHHHHhc---------CCC-CEEEecCCCccchHHHH-hhCC------------CeEEEeeccCCCCcccCHHHH
Q 014603 120 TQAIEVILTVLA---------RPG-ANILLPRPGFPYYEARA-THSH------------LEVRHFDLLPAKGWEVDLDAV 176 (422)
Q Consensus 120 ~~a~~~~~~~l~---------~~g-d~Vl~~~~~~~~~~~~~-~~~g------------~~~~~~~~~~~~~~~~d~~~l 176 (422)
++|++.+++.+. .+| |+|++.+|+|+++...+ ...+ .++..++. .|++.|
T Consensus 132 seA~~~al~~a~~~~~~~~g~~~gr~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~-------~d~~~l 204 (433)
T 1z7d_A 132 AEANETAYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPY-------DDLEAL 204 (433)
T ss_dssp HHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTC--------------------------CEEEECT-------TCHHHH
T ss_pred HHHHHHHHHHHHHHhhhccCCCCCCCeEEEEeCCcCCcchhhhcccCCccccccCCCCCCCeEEeCC-------CCHHHH
Confidence 999999998753 367 99999999998864432 2223 12333332 288999
Q ss_pred HHhh-cCCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecC
Q 014603 177 EALA-DENTVALVIINP-GNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSI 253 (422)
Q Consensus 177 ~~~~-~~~~~~i~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~ 253 (422)
++.+ ++++++ ++++| +|++|.+ ++.+++++|.++|+++|+++|+||+|.++.++|... .+...+...++ .|+
T Consensus 205 e~~l~~~~~~~-vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~~g~~~-~~~~~~~~~di---~t~ 279 (433)
T 1z7d_A 205 EEELKDPNVCA-FIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKLL-CVHHYNVKPDV---ILL 279 (433)
T ss_dssp HHHHTSTTEEE-EEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-GGGGGTCCCSE---EEE
T ss_pred HHHhCCCCEEE-EEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCccCCCcCCcch-hhHhcCCCCCE---EEE
Confidence 9988 455554 55666 5678975 688899999999999999999999998776655421 22222222222 378
Q ss_pred ccccCCCC-ceeEEEEeeCCCCcccchhHHHHHHhhh-hhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHH
Q 014603 254 SKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCD 331 (422)
Q Consensus 254 sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 331 (422)
||.++ +| +|+||++++ +++++.+.... ..+.+.++++++++.++|+...+ ++..++++++.+++.+
T Consensus 280 sK~l~-~G~~~~G~v~~~--------~~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~ 347 (433)
T 1z7d_A 280 GKALS-GGHYPISAVLAN--------DDIMLVIKPGEHGSTYGGNPLAASICVEALNVLIN---EKLCENAEKLGGPFLE 347 (433)
T ss_dssp CGGGG-TTSSCCEEEEEC--------HHHHTTCCTTCCCCTTTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHH
T ss_pred Ccccc-CCCCCeEEEEEC--------HHHHhhhccccccccCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHH
Confidence 99976 79 999999986 35666554422 23446788889888888875332 2455666777777777
Q ss_pred HhhcC-CCCCCC-CCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHH
Q 014603 332 RLKEI-PCITCP-KKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDG 407 (422)
Q Consensus 332 ~L~~~-~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~ 407 (422)
.|+++ .++... ..+..|.++++.++... .+..++...+. ++||.+.|+. .+++|++++ +++++++++
T Consensus 348 ~L~~l~~~~~~~~~~~~~g~~~~i~~~~~~----~~~~~~~~~l~-~~Gv~v~~~~----~~~iRi~~~~~~t~e~i~~~ 418 (433)
T 1z7d_A 348 NLKRELKDSKIVRDVRGKGLLCAIEFKNEL----VNVLDICLKLK-ENGLITRDVH----DKTIRLTPPLCITKEQLDEC 418 (433)
T ss_dssp HHHHHHTTCTTEEEEEEETTEEEEEECTTT----CCHHHHHHHHH-HTTEECCEET----TTEEEECCCTTCCHHHHHHH
T ss_pred HHHHHHHhCCCeEEEEeeeeEEEEEEccCh----hHHHHHHHHHH-HCCeEEecCC----CCEEEEECCcCCCHHHHHHH
Confidence 77653 122111 12344678888886420 13566777665 5699998852 578999886 689999999
Q ss_pred HHHHHHHHHHhcc
Q 014603 408 LGRMKAFYDRHAK 420 (422)
Q Consensus 408 ~~~l~~~~~~~~~ 420 (422)
+++|+++++++.+
T Consensus 419 l~~l~~~l~~~~~ 431 (433)
T 1z7d_A 419 TEIIVKTVKFFDE 431 (433)
T ss_dssp HHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHh
Confidence 9999999987654
No 146
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.98 E-value=2.9e-30 Score=248.21 Aligned_cols=331 Identities=14% Similarity=0.097 Sum_probs=234.4
Q ss_pred CCCCceeecCCCCCCCCCCC-CcHHHHHHHHHHhhCCCC--CCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCH
Q 014603 43 DTRPLIPLGHGDPSAFPSFR-TASVAVDAIVHSVRSARF--NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGC 119 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~-~~~~v~~a~~~~~~~~~~--~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~ 119 (422)
+|..++||..|... .++. .+|++.+++.+++..... ..| +.....++++.+++++ ..+++++++|+
T Consensus 74 ~g~~ylD~~sg~~~--~~lgh~~p~v~~Ai~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~--------g~~~v~~~~sG 142 (439)
T 2oat_A 74 EGRKYFDFLSSYSA--VNQGHCHPKIVNALKSQVDKLTLTSRAF-YNNVLGEYEEYITKLF--------NYHKVLPMNTG 142 (439)
T ss_dssp TCCEEEESSGGGGT--TTTCBTCHHHHHHHHHHHTTCSCCCTTS-EESSHHHHHHHHHHHH--------TCSEEEEESSH
T ss_pred CCCEEEEccCCccc--ccCCCCCHHHHHHHHHHHHhcCcccCcc-CCHHHHHHHHHHHHhc--------CCCEEEEeCCH
Confidence 46778999887643 2244 789999999999876321 123 2234678888888887 25789999999
Q ss_pred HHHHHHHHHHhc---------CCC-CEEEecCCCccchHH-HHhhCC------------CeEEEeeccCCCCcccCHHHH
Q 014603 120 TQAIEVILTVLA---------RPG-ANILLPRPGFPYYEA-RATHSH------------LEVRHFDLLPAKGWEVDLDAV 176 (422)
Q Consensus 120 ~~a~~~~~~~l~---------~~g-d~Vl~~~~~~~~~~~-~~~~~g------------~~~~~~~~~~~~~~~~d~~~l 176 (422)
++|++.+++++. .+| |+|++.+|+|++... .....+ .++..++. .|++.|
T Consensus 143 seA~~~al~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~-------~d~~~l 215 (439)
T 2oat_A 143 VEAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPY-------NDLPAL 215 (439)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHHHHTTCCCHHHHTTSCSCCTTEEEECS-------SCHHHH
T ss_pred HHHHHHHHHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHhHhhcCCChhcccCCCCCCCCeEEeCC-------CCHHHH
Confidence 999999998864 356 899999999988644 333333 23444442 288999
Q ss_pred HHhhc-CCceEEEEeCC-CCCccc-ccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecC
Q 014603 177 EALAD-ENTVALVIINP-GNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSI 253 (422)
Q Consensus 177 ~~~~~-~~~~~i~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~ 253 (422)
++.++ +++ ++++++| ++++|. .++.+++++|.++|++||+++|+||+|.++.++|... .+...+...++ .|+
T Consensus 216 e~~l~~~~~-~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~~g~~~-~~~~~~~~~Di---~t~ 290 (439)
T 2oat_A 216 ERALQDPNV-AAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWL-AVDYENVRPDI---VLL 290 (439)
T ss_dssp HHHTTSTTE-EEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-GGGGGTCCCSE---EEE
T ss_pred HHHhCCCCE-EEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCcch-hHHHhCCCCcE---EEe
Confidence 99884 445 4555666 567896 5688999999999999999999999998776665422 22222322222 288
Q ss_pred ccccCCCC-ceeEEEEeeCCCCcccchhHHHHHHhhh-hhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHH
Q 014603 254 SKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCD 331 (422)
Q Consensus 254 sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 331 (422)
||.++ +| +|+||++++ +++++.+.... ..+.+.++++++++.++|+...+ ++..++++++.+++.+
T Consensus 291 sK~l~-~G~~~~G~v~~~--------~~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~ 358 (439)
T 2oat_A 291 GKALS-GGLYPVSAVLCD--------DDIMLTIKPGEHGSTYGGNPLGCRVAIAALEVLEE---ENLAENADKLGIILRN 358 (439)
T ss_dssp CGGGG-TTSSCCEEEEEC--------HHHHTTSCTTSSCCSSTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHH
T ss_pred ccccc-CCCCCeEEEEEC--------HHHHhccCCCCcccCCCcCHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHH
Confidence 99976 58 999999986 35666554432 23446788889888888875332 2466788889999999
Q ss_pred HhhcCCCCCCC-CCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHH
Q 014603 332 RLKEIPCITCP-KKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGL 408 (422)
Q Consensus 332 ~L~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~ 408 (422)
.|+++ ++.++ ..+..|.++++.++... + .+..++...+. ++||.+.|+. .+++|++++ ++++++++++
T Consensus 359 ~L~~l-~~~~~~~~~~~g~~~~v~l~~~~--~-~~~~~l~~~l~-~~Gv~v~~~~----~~~iRi~~~~~~t~e~i~~~l 429 (439)
T 2oat_A 359 ELMKL-PSDVVTAVRGKGLLNAIVIKETK--D-WDAWKVCLRLR-DNGLLAKPTH----GDIIRFAPPLVIKEDELRESI 429 (439)
T ss_dssp HHTTS-CTTTEEEEEEETTEEEEEECCCS--S-CCHHHHHHHHH-HTTEECCBSS----SSEEEECCCTTCCHHHHHHHH
T ss_pred HHHHh-cCCCcEEEEeeeeEEEEEEecCc--c-HHHHHHHHHHH-HCCeEEecCC----CCEEEEECccCCCHHHHHHHH
Confidence 99887 33311 12345678888886421 0 13566777665 5699999853 578999886 7899999999
Q ss_pred HHHHHHHHH
Q 014603 409 GRMKAFYDR 417 (422)
Q Consensus 409 ~~l~~~~~~ 417 (422)
++|++++++
T Consensus 430 ~~l~~~l~~ 438 (439)
T 2oat_A 430 EIINKTILS 438 (439)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHh
Confidence 999998864
No 147
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.98 E-value=1.7e-29 Score=240.27 Aligned_cols=317 Identities=15% Similarity=0.091 Sum_probs=214.0
Q ss_pred eecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCC--CCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHH
Q 014603 49 PLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYS--STVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVI 126 (422)
Q Consensus 49 ~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~--~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~ 126 (422)
+++.++|.....-...+.+.+++..+........|. +.....+++++++++++ .+ +.+++++|++|++.+
T Consensus 24 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g------~~--~~i~~~sG~~a~~~~ 95 (398)
T 2rfv_A 24 TGALSTPIFQTSTFVFDSAEQGAARFALEESGYIYTRLGNPTTDALEKKLAVLER------GE--AGLATASGISAITTT 95 (398)
T ss_dssp TCCSSCCCCCCSBCCCSSHHHHHHHC-----CCSBTTTCCHHHHHHHHHHHHHHT------CS--EEEEESSHHHHHHHH
T ss_pred CCCcCCCCcCCCccccCCHHHHHHhhcCCCCCCceeCCCChHHHHHHHHHHHHhC------CC--cEEEECCHHHHHHHH
Confidence 466666552111223344555554211111222343 33456788888888873 22 666777788999999
Q ss_pred HHHhcCCCCEEEecCCCccchHHHH----hhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCH
Q 014603 127 LTVLARPGANILLPRPGFPYYEARA----THSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTY 202 (422)
Q Consensus 127 ~~~l~~~gd~Vl~~~~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~ 202 (422)
+.+++++||+|+++.|+|+++...+ ...|.+++.++.. |++.+++.++++++++++++|+||||.+++
T Consensus 96 l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~i~~~~~~v~~~~~~nptG~~~~- 167 (398)
T 2rfv_A 96 LLTLCQQGDHIVSASAIYGCTHAFLSHSMPKFGINVRFVDAA-------KPEEIRAAMRPETKVVYIETPANPTLSLVD- 167 (398)
T ss_dssp HHHHCCTTCEEEEESSSCHHHHHHHHTHHHHTTCEEEEECTT-------SHHHHHHHCCTTEEEEEEESSBTTTTBCCC-
T ss_pred HHHHhCCCCEEEEcCCCcccHHHHHHHHHHHcCCEEEEeCCC-------CHHHHHHhcCCCCeEEEEECCCCCCCcccC-
Confidence 9999999999999999999887665 7789888888752 789999999888999999999999999985
Q ss_pred HHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCcee-EEEEeeCCCCcccchhH
Q 014603 203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRL-GWLVTSDPNGILQDSGI 281 (422)
Q Consensus 203 ~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~ 281 (422)
+++|.++|+++|+++|+|++|+.+.+. .++ .++ ..+++.|+||+++++|.|+ ||++++ +++
T Consensus 168 --l~~i~~l~~~~~~~li~De~~~~~~~~----~~~-~~~---~di~~~s~sK~~~~~g~~~~G~~~~~--------~~~ 229 (398)
T 2rfv_A 168 --IETVAGIAHQQGALLVVDNTFMSPYCQ----QPL-QLG---ADIVVHSVTKYINGHGDVIGGIIVGK--------QEF 229 (398)
T ss_dssp --HHHHHHHHHHTTCEEEEECTTTCTTTC----CGG-GGT---CSEEEEETTTTTTCSSCCCCEEEEEC--------HHH
T ss_pred --HHHHHHHHHHcCCEEEEECCCcccccC----Cch-hhC---CcEEEEeCcccccCCCCceEEEEEEC--------HHH
Confidence 888999999999999999999865432 111 222 3488999999999999998 999986 355
Q ss_pred HH-HHHhhhhh--ccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCC--------------CCCCCCC
Q 014603 282 VD-SIKSFLNI--SSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIP--------------CITCPKK 344 (422)
Q Consensus 282 ~~-~~~~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--------------~~~~~~~ 344 (422)
++ .+...... .++.+++.++++.++++. +..+.++..++.+.+.+.|++.+ ++.+. .
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~-~ 303 (398)
T 2rfv_A 230 IDQARFVGLKDITGGCMSPFNAWLTLRGVKT-----LGIRMERHCENALKIARFLEGHPSITRVYYPGLSSHPQYELG-Q 303 (398)
T ss_dssp HHHHHHTHHHHTTCCCCCHHHHHHHHHHHTT-----HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHH-H
T ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHhhhhh-----HHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHH-H
Confidence 55 55544433 346788888888888875 23333445556666666666542 22211 1
Q ss_pred C---CCceEEEEecCcccccCCCCHHHHHHHHHHh---cCeEEecCCCCC----------------------C-CCeEEE
Q 014603 345 P---EGSMFVMVKLNYSLLEGINSDMEFALKLAKE---ESVIVLPGITVG----------------------L-KDWLRI 395 (422)
Q Consensus 345 ~---~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~gi~v~~g~~~~----------------------~-~~~iRi 395 (422)
| ..+.++++.++. ..+....++++ .|+.+.+|..+. . ++.+|+
T Consensus 304 ~~~~~~g~~~~~~~~~--------~~~~~~~l~~~~~~~~i~~~~G~~~~li~~~~~~~~~~~~~~~~~~~g~~~~~iRl 375 (398)
T 2rfv_A 304 RQMSLPGGIISFEIAG--------GLEAGRRMINSVELCLLAVSLGDTETLIQHPASMTHSPVAPEERLKAGITDGLIRL 375 (398)
T ss_dssp HHCSSCCSEEEEEETT--------HHHHHHHHHTTCSSSEECSCCSSSSCEEECHHHHTSSSSCHHHHHHTTCCTTEEEE
T ss_pred hhCCCCceEEEEEEcC--------CHHHHHHHHHhCCcceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEE
Confidence 1 235566667753 11223334433 377787775431 1 579999
Q ss_pred Eec--cChHHHHHHHHHHHH
Q 014603 396 TFA--VEPSALEDGLGRMKA 413 (422)
Q Consensus 396 s~~--~~~~~l~~~~~~l~~ 413 (422)
|++ +++++++.+++.|++
T Consensus 376 s~~~~~~~~~i~~l~~al~~ 395 (398)
T 2rfv_A 376 SVGLEDPEDIINDLEHAIRK 395 (398)
T ss_dssp ECCSSCHHHHHHHHHHHHHH
T ss_pred EecCCCHHHHHHHHHHHHHh
Confidence 998 456777777666654
No 148
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.97 E-value=3.4e-31 Score=255.61 Aligned_cols=342 Identities=12% Similarity=0.050 Sum_probs=233.0
Q ss_pred CCC--CceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCC--CCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecC
Q 014603 43 DTR--PLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNC--YSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLG 118 (422)
Q Consensus 43 ~~~--~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~--y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g 118 (422)
+|+ .+|||..|......+ ..+|.+.+++.+++.+..... +.+.....++++++++++ +.+.++|++++|
T Consensus 71 dG~~~~ylD~~s~~~~~~lG-h~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~L~e~la~~~------~~~~~~v~~~~s 143 (457)
T 3tfu_A 71 DGQPIEVLDAMSSWWTAIHG-HGHPALDQALTTQLRVMNHVMFGGLTHEPAARLAKLLVDIT------PAGLDTVFFSDS 143 (457)
T ss_dssp TTEEEEEEETTHHHHTCTTC-BTCHHHHHHHHHHHHHCSCCCSSSEECHHHHHHHHHHHHHS------STTEEEEEEESS
T ss_pred CCCeeEEEECCCcHhhhccC-CCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhC------CCCcCEEEEeCc
Confidence 577 889998875332223 368999999999987632211 112223445666666655 345679999999
Q ss_pred HHHHHHHHHHHhcC-------CC-CEEEecCCCccchHHHHhhCCC--------------eEEEeeccCCCCcccCHHHH
Q 014603 119 CTQAIEVILTVLAR-------PG-ANILLPRPGFPYYEARATHSHL--------------EVRHFDLLPAKGWEVDLDAV 176 (422)
Q Consensus 119 ~~~a~~~~~~~l~~-------~g-d~Vl~~~~~~~~~~~~~~~~g~--------------~~~~~~~~~~~~~~~d~~~l 176 (422)
+++|++.+++.+.. +| +.|++.+++|+++...+...+. ++..++.........|++.|
T Consensus 144 GseA~~~Alk~a~~~~~~~g~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~d~~~l 223 (457)
T 3tfu_A 144 GSVSVEVAAKMALQYWRGRGLPGKRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFAPQVPRDYDPAYSAAF 223 (457)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHTTSCCC----------CCCCEEECCCCSSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCceEEEEcCCcCCccHHhhcccCCcccccccccCCCCCceEecCCCcccCHHHHHHH
Confidence 99999999988764 55 5899999999987655544421 22333332211112478888
Q ss_pred HHhhc---CCceEEEEeC-CCCCccccc-CHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEe
Q 014603 177 EALAD---ENTVALVIIN-PGNPCGNVY-TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLG 251 (422)
Q Consensus 177 ~~~~~---~~~~~i~i~~-p~nptG~~~-~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~ 251 (422)
++.++ +++.++++.. ++|++|.++ +.+++++|.++|++||+++|+||+|.++.++|... .+..++..++++
T Consensus 224 e~~l~~~~~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~gr~G~~~-a~~~~~~~pdii--- 299 (457)
T 3tfu_A 224 EAQLAQHAGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGALF-AADHAGVSPDIM--- 299 (457)
T ss_dssp HHHHHHHGGGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-THHHHTCCCSEE---
T ss_pred HHHHHhCCCCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCccccchh-HhHhcCCCceEE---
Confidence 88886 4555565555 589999765 77889999999999999999999999887766432 223333333333
Q ss_pred cCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhh------hhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHH
Q 014603 252 SISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSF------LNISSDPATFIQGAVPQILEKTEEEFFSKITDILRET 325 (422)
Q Consensus 252 s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 325 (422)
|+||.+++..+|+||++++ +++++.+... ...+.+.++++++++.++|+...+ +...++++++
T Consensus 300 t~sK~l~gG~~~lG~v~~~--------~~i~~~~~~~~~~~~~~~~t~~~n~~a~aaa~aaL~~~~~---~~~~~~~~~~ 368 (457)
T 3tfu_A 300 CVGKALTGGYLSLAATLCT--------ADVAHTISAGAAGALMHGPTFMANPLACAVSVASVELLLG---QDWRTRITEL 368 (457)
T ss_dssp EECGGGGTTSSCCEEEEEE--------HHHHHHHHHSSSCSCCCCCTTTTCHHHHHHHHHHHHHHHT---SCHHHHHHHH
T ss_pred EEChhhhCCCcceEEEEEc--------HHHHHHhhccCCCceeEecCCCcCHHHHHHHHHHHHHHhh---hHHHHHHHHH
Confidence 7899864422799999987 5788877521 123457788999999988875321 2345666677
Q ss_pred HHHHHHHhhcC---CCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cC
Q 014603 326 ADICCDRLKEI---PCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VE 400 (422)
Q Consensus 326 ~~~l~~~L~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~ 400 (422)
.+++++.|+++ +.+. . .+..|.++++.++.. .+..++...++ ++||.+.|. .+++|++++ .+
T Consensus 369 ~~~l~~~L~~l~~~~~v~-~-vr~~G~~~~i~l~~~-----~~~~~~~~~l~-~~Gv~v~~~-----~~~lRi~p~~~~t 435 (457)
T 3tfu_A 369 AAGLTAGLDTARALPAVT-D-VRVCGAIGVIECDRP-----VDLAVATPAAL-DRGVWLRPF-----RNLVYAMPPYICT 435 (457)
T ss_dssp HHHHHHHHGGGGGSTTEE-E-EEECSSCEEEEESSC-----CCHHHHHHHHH-HTTEECCCB-----TTEEEECCCTTCC
T ss_pred HHHHHHHHHHHhcCCCee-e-eecCCeEEEEEECCc-----ccHHHHHHHHH-HCCeEEEec-----CCEEEEECCCCCC
Confidence 77777777664 3333 1 233467888887642 14566777665 459999874 378999976 68
Q ss_pred hHHHHHHHHHHHHHHHHhc
Q 014603 401 PSALEDGLGRMKAFYDRHA 419 (422)
Q Consensus 401 ~~~l~~~~~~l~~~~~~~~ 419 (422)
++++++++++|++++++..
T Consensus 436 ~eei~~~l~~L~~~l~~~~ 454 (457)
T 3tfu_A 436 PAEITQITSAMVEVARLVG 454 (457)
T ss_dssp HHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 9999999999999998764
No 149
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.97 E-value=1.3e-30 Score=251.77 Aligned_cols=349 Identities=14% Similarity=0.083 Sum_probs=223.2
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 122 (422)
+|+.++||..|......+ ..+|++.+++.+++.... .|....+..+.++.+++++.+..+ .+.++|++++||++|
T Consensus 42 ~g~~ylD~~~~~~~~~lG-~~~p~v~~A~~~~~~~~~--~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~sGseA 116 (448)
T 3dod_A 42 NGKEYYDGFSSVWLNVHG-HRKKELDDAIKKQLGKIA--HSTLLGMTNVPATQLAETLIDISP--KKLTRVFYSDSGAEA 116 (448)
T ss_dssp TSCEEEETTHHHHTCSSC-BSCHHHHHHHHHHHTTCS--CCCCSSSEEHHHHHHHHHHHHHSC--TTEEEEEEESSHHHH
T ss_pred CCCEEEECCcchhhccCC-CCCHHHHHHHHHHHHhcc--CccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCchHHH
Confidence 688899999886443333 347999999999987632 233334455667777777766543 345799999999999
Q ss_pred HHHHHHHhcC----CC----CEEEecCCCccchHHHHhhCCC-------------eEEEeeccCCCCccc----------
Q 014603 123 IEVILTVLAR----PG----ANILLPRPGFPYYEARATHSHL-------------EVRHFDLLPAKGWEV---------- 171 (422)
Q Consensus 123 ~~~~~~~l~~----~g----d~Vl~~~~~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~---------- 171 (422)
++.+++.+.. +| |+|++.+|+|+++...+...+. .+..++. .+.+..
T Consensus 117 ~~~al~~~~~~~~~~G~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 194 (448)
T 3dod_A 117 MEIALKMAFQYWKNIGKPEKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKAPI--PYVYRSESGDPDECRD 194 (448)
T ss_dssp HHHHHHHHHHHHHHTTCTTCCEEEEEC-----------------------------CEEECC--CCCTTSSSCCHHHHHH
T ss_pred HHHHHHHHHHHHHhhCCCCCCEEEEECCCCCCccHHHHHhcCCccccccccCCCCCceEeCC--CccccCCccchhhhhH
Confidence 9999998765 44 9999999999987644443322 1222222 111111
Q ss_pred -CHHHHHHhhc--CCceEEEEeCC-C-CCccc-ccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCC
Q 014603 172 -DLDAVEALAD--ENTVALVIINP-G-NPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIV 245 (422)
Q Consensus 172 -d~~~l~~~~~--~~~~~i~i~~p-~-nptG~-~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~ 245 (422)
|++.|++.++ ++..++++++| + |++|. +++.+++++|.++|++||++||+||+|+++.+.|... .....+...
T Consensus 195 ~d~~~le~~l~~~~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~-a~~~~~~~~ 273 (448)
T 3dod_A 195 QCLRELAQLLEEHHEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTGKMF-ACEHENVQP 273 (448)
T ss_dssp HHHHHHHHHHHHHGGGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-GGGGGTCCC
T ss_pred HHHHHHHHHHHhCCCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCCcccchh-hhhhcCCCC
Confidence 4788888876 33445555555 5 77775 5678889999999999999999999999877666432 223333322
Q ss_pred CeEEEecCccccCCCC-ceeEEEEeeCCCCcccchhHHHHHHh-------hh-hhccCcchHHHHHHHHHHhhch-HHHH
Q 014603 246 PVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKS-------FL-NISSDPATFIQGAVPQILEKTE-EEFF 315 (422)
Q Consensus 246 ~~i~i~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~-------~~-~~~~~~~~~~~~a~~~~l~~~~-~~~~ 315 (422)
+ +.++||.++ +| +|+||++++ +++++.+.. .. ..+.+.++++++++.++|+... +..+
T Consensus 274 d---i~t~sK~l~-~G~~~ig~v~~~--------~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~ 341 (448)
T 3dod_A 274 D---LMAAGKGIT-GGYLPIAVTFAT--------EDIYKAFYDDYENLKTFFHGHSYTGNQLGCAVALENLALFESENIV 341 (448)
T ss_dssp S---EEEECGGGG-TTSSCCEEEEEE--------HHHHHTTCSCGGGCCCCCCCCTTTTCHHHHHHHHHHHHHHHHTTHH
T ss_pred C---EEEeccccc-CCcCceEEEEEC--------HHHHHHhhhccccCCcccccCCCCcCHHHHHHHHHHHHHHhcccHH
Confidence 3 336789975 48 599999986 567777765 22 2345778899999999997533 2334
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCccccc--CCC----CHHHHHHHHHHhcCeEEecCCCCCC
Q 014603 316 SKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLE--GIN----SDMEFALKLAKEESVIVLPGITVGL 389 (422)
Q Consensus 316 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~----~~~~~~~~l~~~~gi~v~~g~~~~~ 389 (422)
++.++..+..++.+.+ +.++|.+. . .+..|.++|+.++..... ... ...++...++ ++||.+.|+
T Consensus 342 ~~~~~~~~~~~~~l~~-l~~~~~~~-~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~----- 412 (448)
T 3dod_A 342 EQVAEKSKKLHFLLQD-LHALPHVG-D-IRQLGFMCGAELVRSKETKEPYPADRRIGYKVSLKMR-ELGMLTRPL----- 412 (448)
T ss_dssp HHHHHHHHHHHHHHHH-HTTSTTEE-E-EEEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHH-HTTEECCEE-----
T ss_pred HHHHHHHHHHHHHHHH-HhcCCCeE-E-EEeeeEEEEEEEccCcccccccchhhHHHHHHHHHHH-HCCcEEecc-----
Confidence 4444444444555555 55554333 1 233467888877542100 000 0245666654 569999886
Q ss_pred CCeEEEEec--cChHHHHHHHHHHHHHHHHhcc
Q 014603 390 KDWLRITFA--VEPSALEDGLGRMKAFYDRHAK 420 (422)
Q Consensus 390 ~~~iRis~~--~~~~~l~~~~~~l~~~~~~~~~ 420 (422)
.+++|++++ ++++++++++++|++++++...
T Consensus 413 ~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~~ 445 (448)
T 3dod_A 413 GDVIAFLPPLASTAEELSEMVAIMKQAIHEVTS 445 (448)
T ss_dssp TTEEEECCCTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 278999765 7899999999999999987643
No 150
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.97 E-value=7.7e-31 Score=253.56 Aligned_cols=348 Identities=14% Similarity=0.111 Sum_probs=233.0
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCC-CCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSST-VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ 121 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~-~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 121 (422)
++..++||..+.+....++. +|++.+++.+++.+.. +... .+..++++.+++.+.+.+ +.++++|++|+|+++
T Consensus 48 ~g~~~lD~~~~~~~~~lG~~-~~~v~~a~~~~~~~~~---~~~~~~~~~~~~~~l~~~la~~~--~~~~~~v~~~~ggse 121 (449)
T 3a8u_X 48 KGRKVYDSLSGLWTCGAGHT-RKEIQEAVAKQLSTLD---YSPGFQYGHPLSFQLAEKITDLT--PGNLNHVFFTDSGSE 121 (449)
T ss_dssp TCCEEEETTHHHHTCTTCBS-CHHHHHHHHHHTTTCS---CCCSSSCCCHHHHHHHHHHHTTS--STTEEEEEEESSHHH
T ss_pred CCCEEEECCccHhhccCCCC-CHHHHHHHHHHHHhCC---CccccccCCHHHHHHHHHHHHhC--CCCCCEEEEcCcHHH
Confidence 57778999877643223333 7999999999986532 1111 233345555566555543 346789999999999
Q ss_pred HHHHHHHHhcC--------CCCEEEecCCCccchHH-HHhhCCC------------eEEEeeccC--CCC-cccC-----
Q 014603 122 AIEVILTVLAR--------PGANILLPRPGFPYYEA-RATHSHL------------EVRHFDLLP--AKG-WEVD----- 172 (422)
Q Consensus 122 a~~~~~~~l~~--------~gd~Vl~~~~~~~~~~~-~~~~~g~------------~~~~~~~~~--~~~-~~~d----- 172 (422)
|++.+++++.. ++|+|++.+|+|+++.. .....+. ++..++... ..+ .++|
T Consensus 122 a~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~ 201 (449)
T 3a8u_X 122 CALTAVKMVRAYWRLKGQATKTKMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPKEGG 201 (449)
T ss_dssp HHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCHHHHTTTCCCSCSEEEECCCCCGGGTTCSSSCSSSH
T ss_pred HHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCChhhhhccCChhhccccCCCCCCCeEecCCccccCccccCChHHHH
Confidence 99999988753 67999999999988643 3333331 234444321 111 1235
Q ss_pred ---HHHHHHhhcC---CceEEEEeCC-CCCccc-ccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCC
Q 014603 173 ---LDAVEALADE---NTVALVIINP-GNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSI 244 (422)
Q Consensus 173 ---~~~l~~~~~~---~~~~i~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~ 244 (422)
++.|++.+++ ...++++++| +|+||. ..+.+++++|.++|++||+++|+||+|.++.+.|.. ..+..++..
T Consensus 202 ~~~~~~le~~l~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~-~~~~~~~~~ 280 (449)
T 3a8u_X 202 IALADELLKLIELHDASNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTGSM-FGADSFGVT 280 (449)
T ss_dssp HHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SHHHHHTCC
T ss_pred HHHHHHHHHHHHhcCCCCEEEEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCccccCcc-hhhhhcCCC
Confidence 8899888763 2345666777 467996 567899999999999999999999999876655532 122222322
Q ss_pred CCeEEEecCccccCCCC-ceeEEEEeeCCCCcccchhHHHHHHhh----------hhhccCcchHHHHHHHHHHhhchHH
Q 014603 245 VPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKSF----------LNISSDPATFIQGAVPQILEKTEEE 313 (422)
Q Consensus 245 ~~~i~i~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~a~~~~l~~~~~~ 313 (422)
.+++ |+||.+++ | +|+||++++ +++++.+... ...+.+.++++++++.++|+...+
T Consensus 281 ~di~---s~sK~l~~-G~~~~G~~~~~--------~~~~~~l~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~- 347 (449)
T 3a8u_X 281 PDLM---CIAKQVTN-GAIPMGAVIAS--------TEIYQTFMNQPTPEYAVEFPHGYTYSAHPVACAAGLAALCLLQK- 347 (449)
T ss_dssp CSEE---EECGGGGT-TSSCCEEEEEE--------HHHHHHHHTCSSCTTSCSSCCCCTTTTCHHHHHHHHHHHHHHHH-
T ss_pred CCEE---EEcccccC-CCCceEEEEEC--------HHHHHHhhccCcccccccccccCCCcccHHHHHHHHHHHHHHHh-
Confidence 2322 78999864 7 999999986 4677777653 122346678888888888875322
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCCC-CCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCe
Q 014603 314 FFSKITDILRETADICCDRLKEIPCITCP-KKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDW 392 (422)
Q Consensus 314 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~ 392 (422)
++..++++++.+.+++.|++++.+..+ ..+..|.++|+.++........+..++...+. ++||.+.|+. ++
T Consensus 348 --~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~g-----~~ 419 (449)
T 3a8u_X 348 --ENLVQSVAEVAPHFEKALHGIKGAKNVIDIRNFGLAGAIQIAPRDGDAIVRPFEAGMALW-KAGFYVRFGG-----DT 419 (449)
T ss_dssp --TTHHHHHHHHHHHHHHHHHTTTTSTTEEEEEEETTEEEEEECCBTTBSSHHHHHHHHHHH-HHTEECEEET-----TE
T ss_pred --cCHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeeEEEEEEEEecCcccccccHHHHHHHHH-HCCcEEecCC-----CE
Confidence 245677888888888888875333311 12345778898886421000001225666665 5699999872 78
Q ss_pred EEEEec--cChHHHHHHHHHHHHHHHHh
Q 014603 393 LRITFA--VEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 393 iRis~~--~~~~~l~~~~~~l~~~~~~~ 418 (422)
+||+++ ++++++++++++|++++++.
T Consensus 420 iRis~~~~~t~~~i~~~l~~l~~~l~~~ 447 (449)
T 3a8u_X 420 LQFGPTFNSKPQDLDRLFDAVGEVLNKL 447 (449)
T ss_dssp EEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred EEEECCCcCCHHHHHHHHHHHHHHHHHH
Confidence 999965 78999999999999998764
No 151
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.97 E-value=1.2e-30 Score=245.12 Aligned_cols=324 Identities=14% Similarity=0.088 Sum_probs=223.8
Q ss_pred ceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCC--------CCCCCCCCCHHHHHHHHHHHhhcCCCCCCCC-C-EEEe
Q 014603 47 LIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARF--------NCYSSTVGILPARRAIADYLNRDLPYKLSPD-D-VYLT 116 (422)
Q Consensus 47 ~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~--------~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~-i~~~ 116 (422)
++.++.|. .++|+.+++++.+.+.+... ..|.+ ...++++.+.+.+.+.+| ++++ + +++|
T Consensus 5 ~~l~~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~la~~~g--~~~~~~~i~~t 74 (362)
T 2c0r_A 5 AYNFNAGP------AALPLEVLERAQAEFVDYQHTGMSIMEMSHRGA--VYEAVHNEAQARLLALLG--NPTGYKVLFIQ 74 (362)
T ss_dssp CEECCSSS------CCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSH--HHHHHHHHHHHHHHHHTT--CCSSEEEEEES
T ss_pred eeeccCCC------CCCCHHHHHHHHHHHhhhhhcCccccccCCCcH--HHHHHHHHHHHHHHHHhC--CCCCcEEEEEC
Confidence 45555553 47889999999998753210 11211 123445555555555444 3443 5 4678
Q ss_pred cCHHHHHHHHHHHhcCCCCEEEecCCCccc--hHHHHhhCCCeEEEeeccCC--CCcccCHHHHHHhhcCCceEEEEeCC
Q 014603 117 LGCTQAIEVILTVLARPGANILLPRPGFPY--YEARATHSHLEVRHFDLLPA--KGWEVDLDAVEALADENTVALVIINP 192 (422)
Q Consensus 117 ~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~--~~~~~~~~g~~~~~~~~~~~--~~~~~d~~~l~~~~~~~~~~i~i~~p 192 (422)
+|++++++.++.+++++||+|+++.+.+++ +...++..| +++.++.+.+ .+..+|.++++ ++++++++++++|
T Consensus 75 ~g~t~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~~~g-~~~~v~~~~~~~~~~~~~~~~~~--i~~~t~~v~~~~~ 151 (362)
T 2c0r_A 75 GGASTQFAMIPMNFLKEGQTANYVMTGSWASKALKEAKLIG-DTHVAASSEASNYMTLPKLQEIQ--LQDNAAYLHLTSN 151 (362)
T ss_dssp SHHHHHHHHHHHHHCCTTCEEEEEECSHHHHHHHHHHHHHS-CEEEEEECGGGTTCSCCCGGGCC--CCTTEEEEEEESE
T ss_pred CCchHHHHHHHHhcCCCCCeEEEEecCcHhHHHHHHHHHhC-CeEEEecccccccccCCCHHHcc--cCCCcCEEEEeCC
Confidence 999999999999999999999988776554 245666778 9988887532 22234655543 6778999999999
Q ss_pred CCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCC
Q 014603 193 GNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDP 272 (422)
Q Consensus 193 ~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~ 272 (422)
+||||..++ ++++| +|+++|+|++|+.+. .+.++... .+++.|+||+++++| +||+++++
T Consensus 152 ~n~tG~~~~--~l~~i------~~~~vivD~a~~~~~----~~~~~~~~-----d~~~~s~~K~~g~~G--~G~l~~~~- 211 (362)
T 2c0r_A 152 ETIEGAQFK--AFPDT------GSVPLIGDMSSDILS----RPFDLNQF-----GLVYAGAQKNLGPSG--VTVVIVRE- 211 (362)
T ss_dssp ETTTTEECS--SCCCC------TTSCEEEECTTTTTS----SCCCGGGC-----SEEEEETTTTTCCSS--CEEEEEEG-
T ss_pred cCccceecc--ccccc------CCCEEEEEChhhccC----CccchhHC-----cEEEEeccccccCcC--cEEEEEcH-
Confidence 999999754 45555 799999999998632 22223222 277889999998788 89999874
Q ss_pred CCcccchhHHHHHHh-------------hhhhccCcchHHHHHHHHHHhhchHH-HHHHHHHHHHHHHHHHHHHhhcCCC
Q 014603 273 NGILQDSGIVDSIKS-------------FLNISSDPATFIQGAVPQILEKTEEE-FFSKITDILRETADICCDRLKEIPC 338 (422)
Q Consensus 273 ~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~~ 338 (422)
++++++.. .....++++...+.++.++|+...+. ++++.+++++++++.+.+.|+++++
T Consensus 212 -------~~~~~l~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 284 (362)
T 2c0r_A 212 -------DLVAESPKHLPTMLRYDTYVKNNSLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQSGG 284 (362)
T ss_dssp -------GGSSSCCTTSCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTT
T ss_pred -------HHHhhccccCchHHhHHHHhhccCcCCCchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 22222221 11223577788889988888754343 6888999999999999999999853
Q ss_pred C-CCCCCC--CCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHHHHH
Q 014603 339 I-TCPKKP--EGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGRMKA 413 (422)
Q Consensus 339 ~-~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~l~~ 413 (422)
+ .+...+ ..+.++++.++.. .+..++...| +++||.+.+|..+ .+++|||++ +++++++++++.|++
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~L-~~~gi~~~~g~~~--~~~iRis~~~~~~~e~i~~l~~~l~~ 356 (362)
T 2c0r_A 285 FYRGCVDVDSRSDMNITFRLASE-----ELEKEFVKAS-EQEGFVGLKGHRS--VGGLRASIYNAVPYESCEALVQFMEH 356 (362)
T ss_dssp SSEESSCGGGBCSSEEEEECSCH-----HHHHHHHHHH-HHTTEESCBCCTT--TCSEEEECCTTSCHHHHHHHHHHHHH
T ss_pred ccccCCChHHcCCcEEEEEcCCc-----chHHHHHHHH-HHCCCeeccCCCC--CCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 5 422111 2344667777531 1345666655 6679999888765 468999998 579999999999999
Q ss_pred HHHHh
Q 014603 414 FYDRH 418 (422)
Q Consensus 414 ~~~~~ 418 (422)
+++++
T Consensus 357 ~~~~~ 361 (362)
T 2c0r_A 357 FKRSR 361 (362)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 88764
No 152
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.97 E-value=1.7e-30 Score=252.46 Aligned_cols=322 Identities=17% Similarity=0.159 Sum_probs=221.4
Q ss_pred HHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcC----CCCE---E
Q 014603 65 SVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLAR----PGAN---I 137 (422)
Q Consensus 65 ~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~----~gd~---V 137 (422)
+.+.+++.+.+.... ..|.+..+..++|++++++++ .+++++|+||++|++.++.++++ +||+ |
T Consensus 55 ~~v~~a~~~~~~~~~-~~y~~~~~~~~l~~~la~~~~--------~~~v~~t~ggt~A~~~al~~~~~~~~~~Gd~~~~v 125 (467)
T 1ax4_A 55 NAMSDHQWAAMITGD-EAYAGSRNYYDLKDKAKELFN--------YDYIIPAHQGRGAENILFPVLLKYKQKEGKAKNPV 125 (467)
T ss_dssp CCEEHHHHHHHHTCC-CCSSSCHHHHHHHHHHHHHHC--------CCEEEEESSHHHHHHHHHHHHHHHHHHTTCCSSCE
T ss_pred HHHHHHHHHHHhhcc-cccccCccHHHHHHHHHHHcC--------CCcEEEcCCcHHHHHHHHHHHHHhhccCCCccceE
Confidence 567777777765432 367776788999999999993 36899999999999999999988 9998 9
Q ss_pred EecCCCccchHHHHhhCCCeEEEeeccC---C-----CCcccCHHHHHHhhcC----CceEEEEeCCCCCc-ccccCHHH
Q 014603 138 LLPRPGFPYYEARATHSHLEVRHFDLLP---A-----KGWEVDLDAVEALADE----NTVALVIINPGNPC-GNVYTYQH 204 (422)
Q Consensus 138 l~~~~~~~~~~~~~~~~g~~~~~~~~~~---~-----~~~~~d~~~l~~~~~~----~~~~i~i~~p~npt-G~~~~~~~ 204 (422)
+++.+.|..+.......|..++.++... . .++.+|++.|++.+++ +++++++++|+||+ |.+++.++
T Consensus 126 iv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~~vi~~~~~np~gG~~~~~~~ 205 (467)
T 1ax4_A 126 FISNFHFDTTAAHVELNGCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSN 205 (467)
T ss_dssp EEESSCCHHHHHHHHHTTCEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHH
T ss_pred EEeccccchhhHHHhccCCceecccccccccccccCCcccccCHHHHHHHHHhcCCCCeeEEEEeccccCCCccCCChhH
Confidence 8886555666777777888877665421 1 1346899999998863 68899999999999 89999999
Q ss_pred HHHHHHHHHHcCcEEEEcccccc--c--------ccCCCCCCCccccC----CCCCeEEEecCccccCCC-CceeEEEEe
Q 014603 205 LQKIAETAKKLGIMVIADEVYDH--L--------AFGNTPFVPMGVFG----SIVPVLTLGSISKRWIVP-GWRLGWLVT 269 (422)
Q Consensus 205 l~~i~~~~~~~~~~li~D~~~~~--~--------~~~~~~~~~~~~~~----~~~~~i~i~s~sK~~~~~-G~r~G~~~~ 269 (422)
+++|+++|++||+++|+|+++.. . .+.+. ++..+. ...+ +++.|+||+++++ | |++++
T Consensus 206 l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~d-~~~~s~sK~~g~~~G---g~~~~ 278 (467)
T 1ax4_A 206 LKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNA---TIKEVIFDMYKYAD-ALTMSAKKDPLLNIG---GLVAI 278 (467)
T ss_dssp HHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTC---CHHHHHHHHGGGCS-EEEEETTSTTCCSSC---EEEEE
T ss_pred HHHHHHHHHHcCCEEEEEchhhhhcchhccccccccCCC---chhhhhhhhccccc-eEEEeccccCCCCcc---eEEEe
Confidence 99999999999999999998653 1 22222 111111 0011 5668999998665 4 66766
Q ss_pred eCCCCcccch-hHHHHHHhhhhh------ccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC
Q 014603 270 SDPNGILQDS-GIVDSIKSFLNI------SSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCP 342 (422)
Q Consensus 270 ~~~~~~~~~~-~~~~~~~~~~~~------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 342 (422)
++ + ++++++...... .+..+...+.++..+++...+ ++..++..++++.+.+.|++ +++. +
T Consensus 279 ~d-------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~L~~-~~~~-~ 346 (467)
T 1ax4_A 279 RD-------NEEIFTLARQRCVPMEGFVTYGGLAGRDMAAMVQGLEEGTE---EEYLHYRIGQVKYLGDRLRE-AGIP-I 346 (467)
T ss_dssp SS-------CHHHHHHHHHHHHHHTCSTTTTTCCHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHHHHHHH-TTCC-B
T ss_pred CC-------HHHHHHHHHhhccccccccccCCccchHHHHHHHHHHHhhh---hhHHHHHHHHHHHHHHHHHh-CCCC-c
Confidence 53 3 466665543221 112222223333334443211 11222333566778888877 4776 3
Q ss_pred CCCCCceEEEEe-------cCcccccCCCCHHHHHHHHHHhcCeEEec-CCCC-------C-----CCCeEEEEec---c
Q 014603 343 KKPEGSMFVMVK-------LNYSLLEGINSDMEFALKLAKEESVIVLP-GITV-------G-----LKDWLRITFA---V 399 (422)
Q Consensus 343 ~~~~~g~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~~gi~v~~-g~~~-------~-----~~~~iRis~~---~ 399 (422)
..|.+++++|+. ++.. + .+..++...+++++||.+.| |..+ + ..+++|++++ +
T Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~l~~~L~~~~gv~v~~~g~~~~~~~~~~g~~~~~~~~~iRls~~~~~~ 422 (467)
T 1ax4_A 347 QYPTGGHAVFVDCKKLVPQIPGD---Q-FPAQAVINALYLESGVRAVEIGSFLLGRDPATGEQKHADMEFMRLTIARRVY 422 (467)
T ss_dssp CSSCCSSEEEEESTTTCTTSCGG---G-CHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTSS
T ss_pred ccCCCceEEEEehhhhccccccC---C-CCHHHHHHHHHHhcCceeeecCccccccccccccccccccceEEEecccccC
Confidence 367888899988 3211 1 13556777665778999998 5421 1 1379999997 6
Q ss_pred ChHHHHHHHHHHHHHHHHh
Q 014603 400 EPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 400 ~~~~l~~~~~~l~~~~~~~ 418 (422)
+++++++++++|++++++.
T Consensus 423 t~e~i~~~~~~l~~~~~~~ 441 (467)
T 1ax4_A 423 TNDHMDYIADALIGLKEKF 441 (467)
T ss_dssp CHHHHHHHHHHHHTTHHHH
T ss_pred CHHHHHHHHHHHHHHHHhh
Confidence 8999999999999988774
No 153
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.97 E-value=5.4e-31 Score=247.27 Aligned_cols=322 Identities=15% Similarity=0.111 Sum_probs=226.3
Q ss_pred ceeecCCCCCCCCCCCCcHHHHHHHHHHhhCC---CCCCCCC---CC----CCHHHHHHHHHHHhhcCCCCCCCCCEEEe
Q 014603 47 LIPLGHGDPSAFPSFRTASVAVDAIVHSVRSA---RFNCYSS---TV----GILPARRAIADYLNRDLPYKLSPDDVYLT 116 (422)
Q Consensus 47 ~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~---~~~~y~~---~~----g~~~lr~~ia~~l~~~~~~~~~~~~i~~~ 116 (422)
+++|+.|. .++|+.+.+++.+.+... ....|.. .. ...++++.++++++ .. ++++|+++
T Consensus 4 ~~~~~~g~------~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g----~~-~~~~v~~~ 72 (360)
T 1w23_A 4 VFNFNAGP------SALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQ----IP-NDYQILFL 72 (360)
T ss_dssp CEECCSSS------CCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHT----CC-TTEEEEEE
T ss_pred eEeecCCC------cCCCHHHHHHHHHHhhhhccccccccccCCCCHHHHHHHHHHHHHHHHHhC----CC-CCceEEEE
Confidence 56777765 367799999999987542 1111211 11 24566677777662 22 35799999
Q ss_pred cCH-HHHHHHHHHHhcCC---CCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHH-hhcCCceEEEEeC
Q 014603 117 LGC-TQAIEVILTVLARP---GANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEA-LADENTVALVIIN 191 (422)
Q Consensus 117 ~g~-~~a~~~~~~~l~~~---gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~-~~~~~~~~i~i~~ 191 (422)
+|+ ++|+..++.+++.+ ||.|+++.++|... ..++..| +++.++++++++ .+|++++++ .++++++++++++
T Consensus 73 ~g~gt~al~~~~~~l~~~~~~g~~vi~~~~~~~~~-~~~~~~g-~~~~v~~~~~~~-~~d~~~l~~~~i~~~~k~v~~~~ 149 (360)
T 1w23_A 73 QGGASLQFTMLPMNLLTKGTIGNYVLTGSWSEKAL-KEAKLLG-ETHIAASTKANS-YQSIPDFSEFQLNENDAYLHITS 149 (360)
T ss_dssp SSHHHHHHHHHHHHHCCTTCEEEEEECSHHHHHHH-HHHHTTS-EEEEEEECGGGT-SCSCCCGGGCCCCTTEEEEEEES
T ss_pred CCcchHHHHHHHHHhcCCCCcccEEEecchhHHHH-HHHHHhC-CeEEeecccccC-cCCccchHhhccCCCCCEEEEeC
Confidence 998 99999999988765 56777777777643 3456678 999998864333 378889988 8888899999999
Q ss_pred CCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeC
Q 014603 192 PGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD 271 (422)
Q Consensus 192 p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~ 271 (422)
|+||||.+++ ++. +++|+++|+|++|+.+.. ..++..+ + ++++|+||.|+++| +||+++++
T Consensus 150 ~~nptG~~~~--~i~------~~~~~~li~D~a~~~~~~----~~~~~~~--d---i~~~s~sK~~~~~G--~G~~~~~~ 210 (360)
T 1w23_A 150 NNTIYGTQYQ--NFP------EINHAPLIADMSSDILSR----PLKVNQF--G---MIYAGAQKNLGPSG--VTVVIVKK 210 (360)
T ss_dssp EETTTTEECS--SCC------CCCSSCEEEECTTTTTSS----CCCGGGC--S---EEEEETTTTTSCTT--CEEEEEEH
T ss_pred CCCCcceecc--ccc------ccCCceEEEechhhcCCC----CcCcccC--C---EEEEEcccccCCCC--cEEEEEcH
Confidence 9999999986 332 279999999999986431 2233332 2 78999999988666 89999863
Q ss_pred CCCcccchhHHHHHHhhh-------------hhccCcchHHHHHHHHHHhhchHH-HHHHHHHHHHHHHHHHHHHhhcCC
Q 014603 272 PNGILQDSGIVDSIKSFL-------------NISSDPATFIQGAVPQILEKTEEE-FFSKITDILRETADICCDRLKEIP 337 (422)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~ 337 (422)
++++++.... ...++++...+.++..+++...+. ++++..++++++++.+.+.|++++
T Consensus 211 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 282 (360)
T 1w23_A 211 --------DLLNTKVEQVPTMLQYATHIKSDSLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDESN 282 (360)
T ss_dssp --------HHHCSCCTTCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred --------HHHhhcccCCcchhhhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHcc
Confidence 3444333211 112355667777777777653333 678889999999999999999986
Q ss_pred CC-CCCCCC--CCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHHHH
Q 014603 338 CI-TCPKKP--EGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGRMK 412 (422)
Q Consensus 338 ~~-~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~l~ 412 (422)
++ .....| .++.++|+.++.. .+..++...+ .++||.+.+|..+ .+++|++++ ++++++++++++|+
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l-~~~gi~~~~~~~~--~~~iRis~~~~~~~~~i~~~~~~l~ 354 (360)
T 1w23_A 283 GFYVGHAEKGSRSLMNVTFNLRNE-----ELNQQFLAKA-KEQGFVGLNGHRS--VGGCRASIYNAVPIDACIALRELMI 354 (360)
T ss_dssp TSSEESSCGGGBCSSEEEEECSSH-----HHHHHHHHHH-HHTTEESCBCCTT--TCSEEEECCTTSCHHHHHHHHHHHH
T ss_pred CcccccCCchhccCcEEEEEcCCC-----ccHHHHHHHH-HHCCeeeecCCCC--CCeEEEEecCCCCHHHHHHHHHHHH
Confidence 54 311123 2355888888642 0244555554 5679999988754 588999998 68899999999999
Q ss_pred HHHHH
Q 014603 413 AFYDR 417 (422)
Q Consensus 413 ~~~~~ 417 (422)
+++++
T Consensus 355 ~~~~~ 359 (360)
T 1w23_A 355 QFKEN 359 (360)
T ss_dssp HHHHH
T ss_pred HHHhh
Confidence 88754
No 154
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.97 E-value=3.7e-30 Score=246.36 Aligned_cols=321 Identities=13% Similarity=0.089 Sum_probs=227.7
Q ss_pred CCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCC----C-C--CCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEec
Q 014603 45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNC----Y-S--STVGILPARRAIADYLNRDLPYKLSPDDVYLTL 117 (422)
Q Consensus 45 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~----y-~--~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~ 117 (422)
++.++|+.+.+. +.++.+.+++.+++.....+. + . ......++++.+++++ ++++++|++|+
T Consensus 27 ~~~~yld~~~~~-----~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~v~~~~ 95 (416)
T 1qz9_A 27 EGVIYLDGNSLG-----ARPVAALARAQAVIAEEWGNGLIRSWNSAGWRDLSERLGNRLATLI------GARDGEVVVTD 95 (416)
T ss_dssp TTCEECCTTTSC-----CCBTTHHHHHHHHHHTCCCCCGGGHHHHTSGGGHHHHHHHHHHTTT------TCCTTSEEECS
T ss_pred CCeEeecCCCcC-----CCcHHHHHHHHHHHHHHHhccCccccchhhHHHHHHHHHHHHHHHc------CCCcccEEEeC
Confidence 567888887643 567889999999886531111 1 1 0133467777777776 45678999999
Q ss_pred CHHHHHHHHHHHhc------CCCCEE-EecCCCccchHHH----HhhC--CCeEEEeeccCCCCcccCHHHHHHhhcCCc
Q 014603 118 GCTQAIEVILTVLA------RPGANI-LLPRPGFPYYEAR----ATHS--HLEVRHFDLLPAKGWEVDLDAVEALADENT 184 (422)
Q Consensus 118 g~~~a~~~~~~~l~------~~gd~V-l~~~~~~~~~~~~----~~~~--g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~ 184 (422)
|+++++..++.+++ ++||+| ++..++|+.+... ++.. |.+++.++. ++.|++.+++++
T Consensus 96 g~t~al~~al~~~~~~~~~~~~gd~vii~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~---------~~~l~~~i~~~~ 166 (416)
T 1qz9_A 96 TTSINLFKVLSAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYTLRLVDS---------PEELPQAIDQDT 166 (416)
T ss_dssp CHHHHHHHHHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCEEEEESS---------GGGHHHHCSTTE
T ss_pred ChhHHHHHHHHhhcccccccCCCCcEEEEcCCCCCchHHHHHHHHHHhcCCceEEEeCc---------HHHHHHHhCCCc
Confidence 99999998888876 889875 4555677654332 2233 888877764 678888888889
Q ss_pred eEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCcee
Q 014603 185 VALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRL 264 (422)
Q Consensus 185 ~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~ 264 (422)
+++++++|+||||.+++ +++|.++|+++|+++|+|++|+. |.....+..++. .+++.|++|++ .+|.++
T Consensus 167 ~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~----g~~~~~~~~~~~---d~~~~s~~K~l-~~g~~~ 235 (416)
T 1qz9_A 167 AVVMLTHVNYKTGYMHD---MQALTALSHECGALAIWDLAHSA----GAVPVDLHQAGA---DYAIGCTYKYL-NGGPGS 235 (416)
T ss_dssp EEEEEESBCTTTCBBCC---HHHHHHHHHHHTCEEEEECTTTT----TTSCCCHHHHTC---SEEEECSSSTT-CCCTTC
T ss_pred eEEEEeccccCcccccC---HHHHHHHHHHcCCEEEEEccccc----cCcCCChhhcCC---CEEEecCcccC-CCCCCC
Confidence 99999999999999976 78889999999999999999974 222222333333 38889999995 456777
Q ss_pred -EEEEeeCCCCcccchhHHHHHHhh------------------------hhhccCcchHHHHHHHHHHhhchHHHHHHHH
Q 014603 265 -GWLVTSDPNGILQDSGIVDSIKSF------------------------LNISSDPATFIQGAVPQILEKTEEEFFSKIT 319 (422)
Q Consensus 265 -G~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~ 319 (422)
|++++++. +.+.+... ....++++...+.++.++++...+.++++..
T Consensus 236 ~g~l~~~~~--------~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~ 307 (416)
T 1qz9_A 236 QAFVWVSPQ--------LCDLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDMASLR 307 (416)
T ss_dssp CCEEEECTT--------TTTTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHHHH
T ss_pred eEEEEECHH--------HHhccCCCccccCccccccCCCCccCCCcchHHhcCCCCCHHHHHHHHHHHHHHHhcCHHHHH
Confidence 99998642 22222211 1112356677777777777653334577888
Q ss_pred HHHHHHHHHHHHHhhcC-C--CCCCCCCCC----CceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCe
Q 014603 320 DILRETADICCDRLKEI-P--CITCPKKPE----GSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDW 392 (422)
Q Consensus 320 ~~~~~~~~~l~~~L~~~-~--~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~ 392 (422)
++++++++.+.+.|+++ | ++.+. .+. .+.++++.++ +..++...+ .++||.+... ..++
T Consensus 308 ~~~~~~~~~l~~~L~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~--------~~~~l~~~l-~~~gi~~~~~----~~~~ 373 (416)
T 1qz9_A 308 RKSLALTDLFIELVEQRCAAHELTLV-TPREHAKRGSHVSFEHP--------EGYAVIQAL-IDRGVIGDYR----EPRI 373 (416)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSCCEEC-SCSSGGGBCSEEEEECT--------THHHHHHHH-HTTTEECEEE----TTTE
T ss_pred HHHHHHHHHHHHHHHhhccCCCeEEe-CCCCHHHcCCEEEEecC--------CHHHHHHHH-HhCCcEeccC----CCCe
Confidence 89999999999999885 6 67633 442 2567788775 255666666 4669987542 3678
Q ss_pred EEEEec---cChHHHHHHHHHHHHHHHHh
Q 014603 393 LRITFA---VEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 393 iRis~~---~~~~~l~~~~~~l~~~~~~~ 418 (422)
+||+++ ++++++++++++|++++++.
T Consensus 374 lRis~~~~~~t~~~i~~~~~~l~~~~~~~ 402 (416)
T 1qz9_A 374 MRFGFTPLYTTFTEVWDAVQILGEILDRK 402 (416)
T ss_dssp EEEECCTTTCCHHHHHHHHHHHHHHHHHT
T ss_pred EEEeCcccCCCHHHHHHHHHHHHHHHhcc
Confidence 999986 58999999999999998764
No 155
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.97 E-value=3.3e-30 Score=250.04 Aligned_cols=349 Identities=17% Similarity=0.135 Sum_probs=234.4
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 122 (422)
+|+.+|||..|......+ ..+|.|.+++.+++.+.. .+....+..+.+..+++++.+..+ .+.+.|++++||++|
T Consensus 52 ~G~~ylD~~s~~~~~~lG-h~~p~v~~A~~~~l~~~~--~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~sGseA 126 (476)
T 3i5t_A 52 DGRRLIDGPAGMWCAQVG-YGRREIVDAMAHQAMVLP--YASPWYMATSPAARLAEKIATLTP--GDLNRIFFTTGGSTA 126 (476)
T ss_dssp TCCEEEETTHHHHTCTTC-BCCHHHHHHHHHHHHHCC--CCCTTTCBCHHHHHHHHHHHTTSS--TTCCEEEEESSHHHH
T ss_pred CCCEEEECCCchhhccCC-CCCHHHHHHHHHHHHhcc--CcccCccCCHHHHHHHHHHHhcCC--CCcCEEEEeCchHHH
Confidence 688899999885432222 358999999999987632 122223456788888888887654 345799999999999
Q ss_pred HHHHHHHhcC--------CCCEEEecCCCccchHHHHhhCCCe-------------EEEeeccCC-CCcccC--------
Q 014603 123 IEVILTVLAR--------PGANILLPRPGFPYYEARATHSHLE-------------VRHFDLLPA-KGWEVD-------- 172 (422)
Q Consensus 123 ~~~~~~~l~~--------~gd~Vl~~~~~~~~~~~~~~~~g~~-------------~~~~~~~~~-~~~~~d-------- 172 (422)
++.+++.++. .++.|++.+++|+++...+...+.. +..++.... ..+..+
T Consensus 127 ~~~Aik~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 206 (476)
T 3i5t_A 127 VDSALRFSEFYNNVLGRPQKKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDRISFLSSPNPRHAGNRSQEAFLDDL 206 (476)
T ss_dssp HHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTTEEEECCCCGGGCTTSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCCEEEEEcCCcCcCChhhccccCChhhccccCCCCCCcEEeCCCcccccCCCchHHHHHHH
Confidence 9999998753 3579999999999887655543321 222221100 001112
Q ss_pred HHHHHHhhc----CCceEEEEeCCCCCccc-ccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCcc-ccCCCCC
Q 014603 173 LDAVEALAD----ENTVALVIINPGNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMG-VFGSIVP 246 (422)
Q Consensus 173 ~~~l~~~~~----~~~~~i~i~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~-~~~~~~~ 246 (422)
++.|++.++ +++.++++..+++++|. +++.+++++|.++|++||+++|+||+|+++.++|... .+. .++..++
T Consensus 207 ~~~le~~i~~~~~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~gr~G~~~-~~~~~~~v~pd 285 (476)
T 3i5t_A 207 VQEFEDRIESLGPDTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCGEWF-ASEKVFGVVPD 285 (476)
T ss_dssp HHHHHHHHHHHCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSC-HHHHTTCCCCS
T ss_pred HHHHHHHHHhcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccccCce-eeecccCCCcc
Confidence 678888775 23444444444677785 7888999999999999999999999999887776532 222 3333333
Q ss_pred eEEEecCccccCCCC-ceeEEEEeeCCCCcccchhHHHHHHhh--------hhhccCcchHHHHHHHHHHhhchHHHHHH
Q 014603 247 VLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKSF--------LNISSDPATFIQGAVPQILEKTEEEFFSK 317 (422)
Q Consensus 247 ~i~i~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~ 317 (422)
++ ++||.++ .| +|+|+++++ +++++.+... ...+.+.++++++++.++|+...+ ++
T Consensus 286 i~---t~sK~l~-~G~~plg~v~~~--------~~i~~~~~~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~---~~ 350 (476)
T 3i5t_A 286 II---TFAKGVT-SGYVPLGGLAIS--------EAVLARISGENAKGSWFTNGYTYSNQPVACAAALANIELMER---EG 350 (476)
T ss_dssp EE---EECGGGG-TTSSCCEEEEEC--------HHHHHTTSGGGCTTCEECCCCTTTTCHHHHHHHHHHHHHHHH---TT
T ss_pred hh---hhhhhhc-CCCcCeEEEEEC--------HHHHHHHhcCCcccccccccCCCCcCHHHHHHHHHHHHHHHh---HH
Confidence 33 5689975 48 999999986 5777777653 223457788999999999985332 34
Q ss_pred HHHHHHHHHHHHHHHhhcC---CCCCCCCCCCCceEEEEecCcccccCCC------CHHHHHHHHHHhcCeEEecCCCCC
Q 014603 318 ITDILRETADICCDRLKEI---PCITCPKKPEGSMFVMVKLNYSLLEGIN------SDMEFALKLAKEESVIVLPGITVG 388 (422)
Q Consensus 318 ~~~~~~~~~~~l~~~L~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~------~~~~~~~~l~~~~gi~v~~g~~~~ 388 (422)
..++++++.+++++.|+++ |.+. . .+..|.++++.+......... ...++...+ .++||.+.|..
T Consensus 351 ~~~~~~~~~~~l~~~L~~l~~~~~v~-~-v~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~g--- 424 (476)
T 3i5t_A 351 IVDQAREMADYFAAALASLRDLPGVA-E-TRSVGLVGCVQCLLDPTRADGTAEDKAFTLKIDERC-FELGLIVRPLG--- 424 (476)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTSTTEE-E-EEEETTEEEEEECCC-----CCHHHHHHHHHHHHHH-HHTTEECEEET---
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeE-E-EEecCceeEEEEecCccccccccchhHHHHHHHHHH-HHCCCEEEecC---
Confidence 5566667777777777654 3332 1 233466777776532100000 033455555 45699999842
Q ss_pred CCCeEEEEec--cChHHHHHHHHHHHHHHHHhcc
Q 014603 389 LKDWLRITFA--VEPSALEDGLGRMKAFYDRHAK 420 (422)
Q Consensus 389 ~~~~iRis~~--~~~~~l~~~~~~l~~~~~~~~~ 420 (422)
+++||+++ ++++++++++++|++++++..+
T Consensus 425 --~~iRi~p~l~~t~e~i~~~l~~l~~~l~~~~~ 456 (476)
T 3i5t_A 425 --DLCVISPPLIISRAQIDEMVAIMRQAITEVSA 456 (476)
T ss_dssp --TEEEECCCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred --CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 78999965 7999999999999999987654
No 156
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.97 E-value=1.2e-30 Score=250.67 Aligned_cols=343 Identities=14% Similarity=0.065 Sum_probs=227.9
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 122 (422)
+|+.++||..|......+ +.+|++.+++.+++.+.....| +.....++++++++++ + .++++++++||++|
T Consensus 51 ~g~~ylD~~~~~~~~~lG-~~~p~v~~A~~~~~~~~~~~~~-~~~~~~~l~~~la~~~------~-~~~~v~~~~~Gsea 121 (429)
T 3k28_A 51 DGNEYIDYVLSWGPLIHG-HANDRVVEALKAVAERGTSFGA-PTEIENKLAKLVIERV------P-SIEIVRMVNSGTEA 121 (429)
T ss_dssp TCCEEEESCGGGTTCTTC-BSCHHHHHHHHHHHHHCSCCSS-CCHHHHHHHHHHHHHS------T-TCSEEEEESSHHHH
T ss_pred CCCEEEECCCChhhcccC-CCCHHHHHHHHHHHhhCcCcCC-CCHHHHHHHHHHHHhC------C-CCCEEEEeCChHHH
Confidence 588899999987543222 3589999999999876443334 3345667888888776 2 56899999999999
Q ss_pred HHHHHHHhcC--CCCEEEecCCCccchHHHHhhC-CCeEEEeeccCCCCcc------------cCHHHHHHhhcC--Cce
Q 014603 123 IEVILTVLAR--PGANILLPRPGFPYYEARATHS-HLEVRHFDLLPAKGWE------------VDLDAVEALADE--NTV 185 (422)
Q Consensus 123 ~~~~~~~l~~--~gd~Vl~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~------------~d~~~l~~~~~~--~~~ 185 (422)
++.+++.+.. ++++|++.+++|+++...+... +.....++.....+.. -|++.|++.+++ +..
T Consensus 122 ~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~ 201 (429)
T 3k28_A 122 TMSALRLARGYTGRNKILKFIGCYHGHGDSLLIKAGSGVATLGLPDSPGVPEGVAKNTITVAYNDLESVKYAFEQFGDDI 201 (429)
T ss_dssp HHHHHHHHHHHHTCCEEEEEETCCCCSCGGGCSSCCTTC-----CCCTTCCHHHHTTEEEEETTCHHHHHHHHHHHGGGE
T ss_pred HHHHHHHHHHhhCCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCcCCCCCcccCceeecCCCCHHHHHHHHHhCCCCE
Confidence 9999987754 5689999999998765444322 2222211111111100 178899888763 345
Q ss_pred EEEEeCCC-CCcccc-cCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCce
Q 014603 186 ALVIINPG-NPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWR 263 (422)
Q Consensus 186 ~i~i~~p~-nptG~~-~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r 263 (422)
++++++|. |++|.+ ++.+++++|.++|++||+++|+||+|.++ +.|... .....+...+ +.++||.++ +|+|
T Consensus 202 ~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~~-~~~~~~~~~d---i~t~sK~~~-~G~~ 275 (429)
T 3k28_A 202 ACVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMTGF-RVAYNC-GQGYYGVTPD---LTCLGKVIG-GGLP 275 (429)
T ss_dssp EEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTT-TSSTTH-HHHHHTCCCS---EEEECGGGG-TTSC
T ss_pred EEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcch-HHHHhCCCCc---eehhhhhhc-CCCC
Confidence 56666774 455654 46788999999999999999999999887 554321 1222222222 346899986 5999
Q ss_pred eEEEEeeCCCCcccchhHHHHHHhh----hhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhc----
Q 014603 264 LGWLVTSDPNGILQDSGIVDSIKSF----LNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKE---- 335 (422)
Q Consensus 264 ~G~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~---- 335 (422)
+||++++ +++++.+... ...+.++++++++++.++|+... ++..++++++++++++.|++
T Consensus 276 iG~~~~~--------~~~~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~----~~~~~~~~~~~~~l~~~L~~~~~~ 343 (429)
T 3k28_A 276 VGAYGGK--------AEIMRQVAPSGPIYQAGTLSGNPLAMAAGYETLVQLT----PESYVEFERKAEMLEAGLRKAAEK 343 (429)
T ss_dssp CEEEEEC--------HHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHTCC----HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEc--------HHHHhhhccCCCccccCCCCCChHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999986 4676666442 22345778899999999998643 44556666666666666654
Q ss_pred CCCCCCCCCCCCceEEEEecCcccc--------cCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEeccChHHHHHH
Q 014603 336 IPCITCPKKPEGSMFVMVKLNYSLL--------EGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALEDG 407 (422)
Q Consensus 336 ~~~~~~~~~~~~g~~~~~~~~~~~~--------~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~l~~~ 407 (422)
.+.+. . .+..|.++++.+..... .......++...+ .++||.+.|+. .+.+|+++.+++++++++
T Consensus 344 ~~~~~-~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~~----~~~~r~~~~~t~e~i~~~ 416 (429)
T 3k28_A 344 HGIPH-H-INRAGSMIGIFFTDEPVINYDAAKSSNLQFFAAYYREM-VEQGVFLPPSQ----FEGLFLSTVHSDADIEAT 416 (429)
T ss_dssp TTCCC-E-EEEETTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHH-HHTTEECCSST----TSCBCCCTTCCHHHHHHH
T ss_pred CCCCE-E-EEeeccEEEEEEecCCcccccccccccHHHHHHHHHHH-HHCCeEEecCC----CCCEEEECCCCHHHHHHH
Confidence 33332 2 23446677776642110 0000124455555 56799999874 356899888899999999
Q ss_pred HHHHHHHHHHhc
Q 014603 408 LGRMKAFYDRHA 419 (422)
Q Consensus 408 ~~~l~~~~~~~~ 419 (422)
+++|++++++++
T Consensus 417 l~~l~~~l~~~~ 428 (429)
T 3k28_A 417 IAAAEIAMSKLK 428 (429)
T ss_dssp HHHHHHHHHTCC
T ss_pred HHHHHHHHHHHh
Confidence 999999998754
No 157
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.97 E-value=3.2e-30 Score=249.64 Aligned_cols=349 Identities=15% Similarity=0.116 Sum_probs=229.5
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 122 (422)
+|+.+|||..|......+ ..+|.+.+|+.+++.+... .|....+..+.+..+++.+.+.. +.+.++|++++||++|
T Consensus 53 ~G~~ylD~~s~~~~~~lG-h~~p~v~~A~~~~~~~~~~-~~~~~~~~~~~~~~lae~l~~~~--~~~~~~v~~~~sGseA 128 (472)
T 3hmu_A 53 EGEEILDAMAGLWCVNIG-YGRDELAEVAARQMRELPY-YNTFFKTTHVPAIALAQKLAELA--PGDLNHVFFAGGGSEA 128 (472)
T ss_dssp TCCEEECTTHHHHTCTTC-BCCHHHHHHHHHHHHHCSC-CCSSSSEECHHHHHHHHHHHHHS--CTTEEEEEEESSHHHH
T ss_pred CCCEEEECCCchhhccCC-CCCHHHHHHHHHHHHhccc-cccccccCCHHHHHHHHHHHHhC--CCCCCEEEEeCCHHHH
Confidence 588899999885432222 3579999999999876321 23222233345555555555443 3456799999999999
Q ss_pred HHHHHHHhcC--------CCCEEEecCCCccchHHHHhhCCC------------eEEEeeccC--C-CCcccC-------
Q 014603 123 IEVILTVLAR--------PGANILLPRPGFPYYEARATHSHL------------EVRHFDLLP--A-KGWEVD------- 172 (422)
Q Consensus 123 ~~~~~~~l~~--------~gd~Vl~~~~~~~~~~~~~~~~g~------------~~~~~~~~~--~-~~~~~d------- 172 (422)
++.+++.+.. ++++|++.+++|+++...+...+. .+..++... . +++ .|
T Consensus 129 ~~~aik~a~~~~~~~g~~~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~-~~~~~~~~~ 207 (472)
T 3hmu_A 129 NDTNIRMVRTYWQNKGQPEKTVIISRKNAYHGSTVASSALGGMAGMHAQSGLIPDVHHINQPNWWAEGGD-MDPEEFGLA 207 (472)
T ss_dssp HHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCHHHHHTTCCCSSEEEECCCCHHHHCTT-CCHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCCEEEEEcCcCCCccHHhhhccCChhhccccCCCCCcEEeCCCccccCCcc-cCHHHHHHH
Confidence 9999998764 458999999999988655544332 233443211 0 111 23
Q ss_pred -HHHHHHhhc---CCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCC
Q 014603 173 -LDAVEALAD---ENTVALVIINP-GNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP 246 (422)
Q Consensus 173 -~~~l~~~~~---~~~~~i~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~ 246 (422)
++.|++.++ ++..++++++| ++++|.+ ++++.+++|.++|+++|+++|+||+|.++.++|... ....++..++
T Consensus 208 ~~~~le~~i~~~~~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~-a~~~~~v~pd 286 (472)
T 3hmu_A 208 RARELEEAILELGENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRTGNWF-GTQTMGIRPH 286 (472)
T ss_dssp HHHHHHHHHHHHCGGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSC-HHHHHTCCCS
T ss_pred HHHHHHHHHHhcCCCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCcccCccc-hhHHhCCCCc
Confidence 677887775 23455666666 5667765 488899999999999999999999999887776422 2233333333
Q ss_pred eEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhh---hhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHH
Q 014603 247 VLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSF---LNISSDPATFIQGAVPQILEKTEEEFFSKITDILR 323 (422)
Q Consensus 247 ~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 323 (422)
++ ++||.++..|+|+|+++++ +++++.+... ...+.+.++++++++.++|+...+ ++..++++
T Consensus 287 i~---t~sK~l~gg~~plG~v~~~--------~~i~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~---~~~~~~~~ 352 (472)
T 3hmu_A 287 IM---TIAKGLSSGYAPIGGSIVC--------DEVAHVIGKDEFNHGYTYSGHPVAAAVALENLRILEE---ENILDHVR 352 (472)
T ss_dssp EE---EECGGGTTTSSCCEEEEEE--------HHHHHHHTTSCBCCCCTTTTCHHHHHHHHHHHHHHHH---TTHHHHHH
T ss_pred ee---eechhhhcCCcceEEEEEC--------HHHHHhcccCCccccCCCCCCHHHHHHHHHHHHHHHH---hHHHHHHH
Confidence 33 5689977666999999996 5788887321 123457788999999999975332 23445555
Q ss_pred -HHHHHHHHHhhcC---CCCCCCCCCCCceEEEEecCccccc--CC-----CCHHHHHHHHHHhcCeEEecCCCCCCCCe
Q 014603 324 -ETADICCDRLKEI---PCITCPKKPEGSMFVMVKLNYSLLE--GI-----NSDMEFALKLAKEESVIVLPGITVGLKDW 392 (422)
Q Consensus 324 -~~~~~l~~~L~~~---~~~~~~~~~~~g~~~~~~~~~~~~~--~~-----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~ 392 (422)
++.+++++.|+++ |.+. . .+..|.++++.+...... .. ....++...+ .++||.+.|+. ++
T Consensus 353 ~~~~~~l~~~L~~l~~~~~v~-~-vr~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~g-----~~ 424 (472)
T 3hmu_A 353 NVAAPYLKEKWEALTDHPLVG-E-AKIVGMMASIALTPNKASRAKFASEPGTIGYICRERC-FANNLIMRHVG-----DR 424 (472)
T ss_dssp HTHHHHHHHHHHGGGGSTTEE-E-EEEETTEEEEEECSCGGGTCCBSSCTTHHHHHHHHHH-HHTTBCCEEET-----TE
T ss_pred HHHHHHHHHHHHHHhcCCCeE-E-EEecCceEEEEEecCccccccccchhHHHHHHHHHHH-HHCCcEEEecC-----CE
Confidence 5555666665543 4333 2 233466777766431100 00 0034555555 45699999863 79
Q ss_pred EEEEec--cChHHHHHHHHHHHHHHHHhc
Q 014603 393 LRITFA--VEPSALEDGLGRMKAFYDRHA 419 (422)
Q Consensus 393 iRis~~--~~~~~l~~~~~~l~~~~~~~~ 419 (422)
+||+++ .+++++++++++|++++++..
T Consensus 425 iRi~p~~~~t~e~i~~~l~~l~~~l~~~~ 453 (472)
T 3hmu_A 425 MIISPPLVITPAEIDEMFVRIRKSLDEAQ 453 (472)
T ss_dssp EEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 999965 799999999999999987753
No 158
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.97 E-value=2.9e-29 Score=246.44 Aligned_cols=312 Identities=13% Similarity=0.096 Sum_probs=227.7
Q ss_pred CCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCE--EEecCHHHHHHHHHHHhcCCC--------CEEEecCCCccchHHHH
Q 014603 82 CYSSTVGILPARRAIADYLNRDLPYKLSPDDV--YLTLGCTQAIEVILTVLARPG--------ANILLPRPGFPYYEARA 151 (422)
Q Consensus 82 ~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i--~~~~g~~~a~~~~~~~l~~~g--------d~Vl~~~~~~~~~~~~~ 151 (422)
.|....+..++++.+++++.+.+|...+++++ ++|+|+++|+..++.+++++| |+|+++.++|.++...+
T Consensus 130 ~~~~~p~~~~le~~l~~~la~~~g~~~~~~~v~~~~t~ggt~a~~~al~a~~~~g~~~~g~~~d~Vi~~~~~~~~~~~~~ 209 (514)
T 3mad_A 130 HPDLWPSTAKFEAEVVAMTAHMLGGDAAGGTVCGTVTSGGTESLLLAMKTYRDWARATKGITAPEAVVPVSAHAAFDKAA 209 (514)
T ss_dssp CTTTCHHHHHHHHHHHHHHHHHTTGGGGTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHCCSSCEEEEETTSCTHHHHHH
T ss_pred ccccChHHHHHHHHHHHHHHHHcCCCCccCCcceEEcCcHHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCccchHHHHHH
Confidence 34444456678888888887777655545788 999999999999999987766 89999999999999999
Q ss_pred hhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEccccccccc-
Q 014603 152 THSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAF- 230 (422)
Q Consensus 152 ~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~- 230 (422)
+..|.+++.++.++ ++.+|++.|++.++++++++++++|+||||.+.+ +++|.++|+++|+++|+|++|+.+.+
T Consensus 210 ~~~G~~v~~v~~~~--~~~~d~~~Le~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~i~livDea~~~~~~~ 284 (514)
T 3mad_A 210 QYFGIKLVRTPLDA--DYRADVAAMREAITPNTVVVAGSAPGYPHGVVDP---IPEIAALAAEHGIGCHVDACLGGFILP 284 (514)
T ss_dssp HHHTCEEEEECBCT--TSCBCHHHHHHHCCTTEEEEEEETTCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTTTTHH
T ss_pred HHcCCeeEEeeeCC--CCCCCHHHHHHHhccCCEEEEEeCCCCCCccccC---HHHHHHHHHHhCCeEEEecccccccch
Confidence 99999999998864 5679999999999989999999999999999965 78889999999999999999987543
Q ss_pred ----CCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhh------------hhccC
Q 014603 231 ----GNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL------------NISSD 294 (422)
Q Consensus 231 ----~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~ 294 (422)
.|.....+. .......+++.|++|+ +.+|.++|++++++ +......... ...++
T Consensus 285 ~~~~~g~~~~~~~-~~~~g~d~~~~s~~K~-l~~~~~~g~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~gs 354 (514)
T 3mad_A 285 WAERLGYPVPPFD-FRLEGVTSVSADTHKY-GYGAKGTSVILYRR--------PDLLHYQYFIAADWPGGLYFSPTFAGS 354 (514)
T ss_dssp HHHHTTCCCCCCS-TTSTTCCEEEECTTTT-TCCCSSCEEEEESS--------HHHHTTTCEEESSCTTCSEEESSSCSS
T ss_pred hHHhcCCCCCccc-ccCCCCcEEEECchhc-cCCCCCeEEEEEeC--------HHHhccccccccccCCCcccCCccCCC
Confidence 122111111 1111224888899998 46677899999864 2222111000 01123
Q ss_pred cchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHH
Q 014603 295 PATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLA 374 (422)
Q Consensus 295 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~ 374 (422)
.+.....+...++......++++..+++.++++++.+.|++++++.++ .+..+ ++++..+. .+..++...+
T Consensus 355 ~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~~~-~~~~~~~~------~~~~~l~~~L- 425 (514)
T 3mad_A 355 RPGALSATAWAAMLSLGEEGYLDATRRILQAADRLKAGVRAIPSLKIL-GDPLW-VIAVASDE------LNIYQVMEEM- 425 (514)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCEES-SCCSS-EEEEECSS------SCHHHHHHHH-
T ss_pred CchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEe-CCCeE-EEEEeCCC------CCHHHHHHHH-
Confidence 333333344444443345678889999999999999999998888744 44434 66665532 1566777766
Q ss_pred HhcCeEEecCCCCCCCCeEEEEec---cChHHHHHHHHHHHHHHHHhcc
Q 014603 375 KEESVIVLPGITVGLKDWLRITFA---VEPSALEDGLGRMKAFYDRHAK 420 (422)
Q Consensus 375 ~~~gi~v~~g~~~~~~~~iRis~~---~~~~~l~~~~~~l~~~~~~~~~ 420 (422)
.++||.+ +|..+ ++++|++++ ++++++++++++|++++++..+
T Consensus 426 ~~~Gi~v-~g~~~--~~~~Ri~~~~~~~~~e~i~~~l~~L~~~l~~~~~ 471 (514)
T 3mad_A 426 AGRGWRL-NGLHR--PPAFHVALTLRHTEPGVVDRFLADLQDAVAQVRA 471 (514)
T ss_dssp HTTTCBC-EEETT--TTEEEEECCGGGGSTTHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCEe-ccCCC--CCeEEEEEecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 4559988 44333 578999987 4679999999999999987654
No 159
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.97 E-value=5.9e-30 Score=246.41 Aligned_cols=328 Identities=17% Similarity=0.144 Sum_probs=220.8
Q ss_pred CCceeecCC-CCCCCCCCCCcHHHHHHHHHH---hhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHH
Q 014603 45 RPLIPLGHG-DPSAFPSFRTASVAVDAIVHS---VRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT 120 (422)
Q Consensus 45 ~~~i~l~~g-~~~~~~~~~~~~~v~~a~~~~---~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~ 120 (422)
.++|+|+.| ++. ++.++.+.+++... ........|.. .+.+ +++.+++++.+.+| .+++++++||+
T Consensus 89 ~~~i~l~~g~~~~----~~~~~~i~~a~~~~~~~~~~~~~~~Y~~-~g~~-~~~~l~~~la~~~g----~~~~i~~~sGt 158 (464)
T 1ibj_A 89 TLLVNLDNKFDPF----DAMSTPLYQTATFKQPSAIENGPYDYTR-SGNP-TRDALESLLAKLDK----ADRAFCFTSGM 158 (464)
T ss_dssp HHHTCCCCSSCTT----CCSSCCCCCCSBCCCSSSSCCCSCSBTT-TCCH-HHHHHHHHHHHHHT----CSEEEEESSHH
T ss_pred CeEEECCCCCCCC----CCCCccHHhhhhhhhhcccccCCccccC-CCCH-HHHHHHHHHHHHhC----CCeEEEECCHH
Confidence 347888887 533 56666676665532 11222345653 3444 56666666665444 24788888889
Q ss_pred HHHHHHHHHhcCCCCEEEecCCCccchHHH----HhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCc
Q 014603 121 QAIEVILTVLARPGANILLPRPGFPYYEAR----ATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPC 196 (422)
Q Consensus 121 ~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~npt 196 (422)
+|+..++. ++++||+|+++.|+|+++... ++..|.+++.++.. |++.|++.++++++++++++|+|||
T Consensus 159 ~al~~~l~-~~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~-------d~~~l~~~i~~~tk~v~l~~p~Npt 230 (464)
T 1ibj_A 159 AALSAVTH-LIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTT-------KLDEVAAAIGPQTKLVWLESPTNPR 230 (464)
T ss_dssp HHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHTSGGGTCEEEEECTT-------SHHHHHHHCCSSEEEEEECSSCTTT
T ss_pred HHHHHHHH-HhCCCCEEEEECCCchhHHHHHHHHHHHcCCEEEEeCCC-------CHHHHHHHhccCceEEEEeCCCCCC
Confidence 99998886 778999999999999988653 45678888888752 7899999998899999999999999
Q ss_pred ccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCC-CCceeEEEEeeCCCCc
Q 014603 197 GNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIV-PGWRLGWLVTSDPNGI 275 (422)
Q Consensus 197 G~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~-~G~r~G~~~~~~~~~~ 275 (422)
|.+++ +++|+++|+++|+++|+|++|.. +....++. + +..+++.|+||++++ +|+|+||+++++
T Consensus 231 G~v~~---l~~i~~la~~~gi~livDea~~~----g~~~~~~~-~---~~div~~S~sK~~~g~~Gl~~G~l~~~~---- 295 (464)
T 1ibj_A 231 QQISD---IRKISEMAHAQGALVLVDNSIMS----PVLSRPLE-L---GADIVMHSATKFIAGHSDVMAGVLAVKG---- 295 (464)
T ss_dssp CCCCC---HHHHHHHHHTTTCEEEEECTTTC----TTTCCGGG-T---TCSEEEEETTTTTTCSSCCCCEEEEECS----
T ss_pred CEeec---HHHHHHHHHHcCCEEEEECCCcc----cccCChhh-c---CCEEEEECCcccccCCCCCcEEEEEECh----
Confidence 99984 88899999999999999999975 22111222 2 345999999998865 489999999863
Q ss_pred ccchhHHHHHHhhhh-hccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHH----------HHhhcCCCCCCCCC
Q 014603 276 LQDSGIVDSIKSFLN-ISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICC----------DRLKEIPCITCPKK 344 (422)
Q Consensus 276 ~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~----------~~L~~~~~~~~~~~ 344 (422)
+++.+.+..... ...+.+++.++++.++++.. ...+++..+......+.+. +.|+++|++.+. .
T Consensus 296 ---~~l~~~l~~~~~~~g~~~~~~~~~a~~~al~~~-~~r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~-~ 370 (464)
T 1ibj_A 296 ---EKLAKEVYFLQNSEGSGLAPFDCWLCLRGIKTM-ALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLH-F 370 (464)
T ss_dssp ---HHHHHHHHHHHHHTTCBCCHHHHHHHHHHHTTH-HHHHHHHHHHHHHHHHHHHTCTTCCEEECTTSTTSTTHHHH-T
T ss_pred ---HHHHHHHHHHHHhcCCCCCHHHHHHHHhchhhH-HHHHHHHHHHHHHHHHHHHhCCCceEEECCCCCCCcchHHH-h
Confidence 357777766553 23456778888888887642 1222222222222222222 233344444422 2
Q ss_pred CC---CceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCC------------CC----------CC-CCeEEEEec
Q 014603 345 PE---GSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGI------------TV----------GL-KDWLRITFA 398 (422)
Q Consensus 345 ~~---~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~------------~~----------~~-~~~iRis~~ 398 (422)
+. .|.++++.++.. .....+...+ +..||.+.+|. .+ +. ++++|++++
T Consensus 371 ~~~~g~g~~~~~~l~~~-----~~~~~~~~~L-~~~gi~v~~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvg 444 (464)
T 1ibj_A 371 SQAKGAGSVFSFITGSV-----ALSKHLVETT-KYFSIAVSFGSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISAG 444 (464)
T ss_dssp TTCSCCCSEEEEECSCH-----HHHHHHHHHC-SSSEECSCCCSSSCEEECTTTTTTCSCCSSSSSSSSCCTTCEEEECC
T ss_pred ccCCCCceEEEEEECCH-----HHHHHHHHhc-CcceEeecCCCCceeeecccccccccCCHHHHHhcCCCcCeEEEEeC
Confidence 32 245777777421 0122344443 45688888875 11 22 578999999
Q ss_pred cChHHHHHHHHHHHHHHHHh
Q 014603 399 VEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 399 ~~~~~l~~~~~~l~~~~~~~ 418 (422)
. +++++++++|++++++.
T Consensus 445 ~--edi~~li~~L~~al~~~ 462 (464)
T 1ibj_A 445 I--EDVDDLISDLDIAFKTF 462 (464)
T ss_dssp S--SCHHHHHHHHHHHHHSC
T ss_pred C--CCHHHHHHHHHHHHhhc
Confidence 8 89999999999998753
No 160
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.9e-29 Score=246.84 Aligned_cols=334 Identities=13% Similarity=0.076 Sum_probs=239.3
Q ss_pred CCcHHHHHHHHHHhhCC---CCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcC-----C
Q 014603 62 RTASVAVDAIVHSVRSA---RFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLAR-----P 133 (422)
Q Consensus 62 ~~~~~v~~a~~~~~~~~---~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~-----~ 133 (422)
+.++.+.+++.+.+... ....|....+..++++.+++++.+.+|...+++++++++|+++|+..++.++++ +
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~a~~~~~~~~~ 154 (497)
T 3mc6_A 75 HGGDDLIHLQTIAYEKYCVANQLHPDVFPAVRKMESEVVSMVLRMFNAPSDTGCGTTTSGGTESLLLACLSAKMYALHHR 154 (497)
T ss_dssp CCCHHHHHHHHHHHHHTSSCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCTTTCCEEEESSHHHHHHHHHHHHHHHHHHHS
T ss_pred CCchHHHHHHHHHHHHHhhcCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCeEEEcCcHHHHHHHHHHHHHHHHHhcC
Confidence 44577888887776542 222444455677888899888888887665678999999999999999998854 4
Q ss_pred C---CEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHH
Q 014603 134 G---ANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAE 210 (422)
Q Consensus 134 g---d~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~ 210 (422)
| |+|+++.++|..+...+...|.+++.++.++ +++.+|++.|++.++++++++++++|+||+|.+. ++++|.+
T Consensus 155 g~~~~~Vi~~~~~h~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~---~l~~i~~ 230 (497)
T 3mc6_A 155 GITEPEIIAPVTAHAGFDKAAYYFGMKLRHVELDP-TTYQVDLGKVKKFINKNTVLLVGSAPNFPHGIAD---DIEGLGK 230 (497)
T ss_dssp CCSSCEEEEETTSCHHHHHHHHHSCCEEEEECBCT-TTCSBCTTTTGGGCCSSEEEEEEETTCTTTCCCC---SCTTTTT
T ss_pred CCCCceEEEeCCccHHHHHHHHHcCCeEEEEecCc-ccCcCCHHHHHHHHhhCCEEEEEECCCCCCCcCC---CHHHHHH
Confidence 5 8999999999999999999999999999864 3567999999999998999999999999999995 4778899
Q ss_pred HHHHcCcEEEEcccccccccC-----CCCCC-CccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHH
Q 014603 211 TAKKLGIMVIADEVYDHLAFG-----NTPFV-PMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDS 284 (422)
Q Consensus 211 ~~~~~~~~li~D~~~~~~~~~-----~~~~~-~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~ 284 (422)
+|+++|+++|+|++|+.+... +.... ++. .....-.+++.|++|+ +.+|.++|++++++ +....
T Consensus 231 la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~~-~~~~g~d~~~~s~~K~-l~~~~~~g~~~~~~--------~~~~~ 300 (497)
T 3mc6_A 231 IAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLD-FRVPGVTSISCDTHKY-GFAPKGSSVIMYRN--------SDLRM 300 (497)
T ss_dssp HHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCCS-TTSTTCCEEEEETTTT-TCCCSSCEEEECSS--------HHHHT
T ss_pred HHHHhCCEEEEECcchhhhhhhhhhhcccCCcccc-ccCCCCcEEEECchhh-cCCCCCceeEEecC--------HHHHh
Confidence 999999999999999854321 11111 111 1111123788899998 56778899999864 22222
Q ss_pred HHhhhh--h----------ccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCCCCCCCceEE
Q 014603 285 IKSFLN--I----------SSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKE-IPCITCPKKPEGSMFV 351 (422)
Q Consensus 285 ~~~~~~--~----------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~g~~~ 351 (422)
...... . .++.+.....+...++......++.+..++..++++++.+.|++ +|++.++..|..+ ++
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~g~~~~~~~~~~-~v 379 (497)
T 3mc6_A 301 HQYYVNPAWTGGLYGSPTLAGSRPGAIVVGCWATMVNMGENGYIESCQEIVGAAMKFKKYIQENIPDLDIMGNPRYS-VI 379 (497)
T ss_dssp TTSCCBTTCTTSCBCCSSSCSSCBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCEECSCCCSS-EE
T ss_pred hhhcccccccCCCcCCcCcccCCcchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCCee-EE
Confidence 211100 0 01111122223333333333466788889999999999999999 6888855345544 44
Q ss_pred EEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec-cChHHHHHHHHHHHHHHHHhcc
Q 014603 352 MVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA-VEPSALEDGLGRMKAFYDRHAK 420 (422)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~-~~~~~l~~~~~~l~~~~~~~~~ 420 (422)
++..+. .+..++...| .++||.+.++.. ...+|++++ ++++++++++++|++++++..+
T Consensus 380 ~~~~~~------~~~~~l~~~L-~~~Gi~v~~~~~---~~~~ri~~~~~t~e~i~~~~~~L~~~l~~~~~ 439 (497)
T 3mc6_A 380 SFSSKT------LNIHELSDRL-SKKGWHFNALQK---PVALHMAFTRLSAHVVDEICDILRTTVQELKS 439 (497)
T ss_dssp EEECTT------TTHHHHHHHH-HTTTCBCEECCS---SCCEEEECCTTTTCTHHHHHHHHHHHHHHHTC
T ss_pred EEeCCC------CCHHHHHHHH-HhCCEEEecCCC---CCeEEEEEeCCCHHHHHHHHHHHHHHHHHHHh
Confidence 444432 1466776666 556999887643 347899998 7889999999999999987754
No 161
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.97 E-value=3.4e-29 Score=237.83 Aligned_cols=323 Identities=13% Similarity=0.133 Sum_probs=231.6
Q ss_pred CceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHH
Q 014603 46 PLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEV 125 (422)
Q Consensus 46 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~ 125 (422)
++|+|+. |. + ++.+.+++.+.+... .|.+..+..++|+.++++++ .+++++++|+++|++.
T Consensus 9 ~~i~~~~--p~----~--~~~~~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~~--------~~~~~~~~~gt~al~~ 69 (393)
T 1mdo_A 9 DFLPFSR--PA----M--GAEELAAVKTVLDSG---WITTGPKNQELEAAFCRLTG--------NQYAVAVSSATAGMHI 69 (393)
T ss_dssp CCBCSCC--CC----C--CHHHHHHHHHHHHHT---CCSSSHHHHHHHHHHHHHHC--------CSEEEEESCHHHHHHH
T ss_pred cccccCC--CC----C--CHHHHHHHHHHHhcC---CcCCChHHHHHHHHHHHHhC--------CCcEEEecChHHHHHH
Confidence 4678875 22 2 367889998888653 23345678899999999993 2479999999999999
Q ss_pred HHHHh-cCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHH
Q 014603 126 ILTVL-ARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQH 204 (422)
Q Consensus 126 ~~~~l-~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~ 204 (422)
++.++ +++||+|+++.|+|+++...++..|.+++.+++++ +++.+|++.+++.+++++++++++ ||+|... +
T Consensus 70 ~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~~~l~~~~~~v~~~---~~~G~~~---~ 142 (393)
T 1mdo_A 70 ALMALGIGEGDEVITPSMTWVSTLNMIVLLGANPVMVDVDR-DTLMVTPEHIEAAITPQTKAIIPV---HYAGAPA---D 142 (393)
T ss_dssp HHHHTTCCTTCEEEEESSSCHHHHHHHHHTTCEEEEECBCT-TTCCBCHHHHHHHCCTTEEEECCB---CGGGCCC---C
T ss_pred HHHHcCCCCCCEEEeCCCccHhHHHHHHHCCCEEEEEeccC-CcCCCCHHHHHHhcCCCceEEEEe---CCCCCcC---C
Confidence 99999 89999999999999999999999999999998864 346799999999998888877765 4799885 5
Q ss_pred HHHHHHHHHHcCcEEEEcccccc-cccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHH
Q 014603 205 LQKIAETAKKLGIMVIADEVYDH-LAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVD 283 (422)
Q Consensus 205 l~~i~~~~~~~~~~li~D~~~~~-~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~ 283 (422)
+++|.++|+++|+++|+|++|+. ..+.+. + ++. ..+++.|+||..+++|.|+||+++++ +++.+
T Consensus 143 ~~~i~~l~~~~~~~li~D~a~~~g~~~~~~---~---~~~--~d~~~~S~~k~K~l~~~~~g~~~~~~-------~~~~~ 207 (393)
T 1mdo_A 143 LDAIYALGERYGIPVIEDAAHATGTSYKGR---H---IGA--RGTAIFSFHAIKNITCAEGGIVVTDN-------PQFAD 207 (393)
T ss_dssp HHHHHHHHHHHTCCBCEECTTCTTCEETTE---E---TTS--SSEEEEECCTTSSSCSSSCEEEEESC-------HHHHH
T ss_pred HHHHHHHHHHcCCeEEEECccccCCeECCe---e---cCC--CCeEEEeCCCCCccccccceEEEeCC-------HHHHH
Confidence 88889999999999999999985 333322 1 111 34889999933334556899999853 45777
Q ss_pred HHHhhhhhc-------------------------cCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 014603 284 SIKSFLNIS-------------------------SDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPC 338 (422)
Q Consensus 284 ~~~~~~~~~-------------------------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 338 (422)
++....... ...+.+..+++...++. +++..++.+++++.+.+.|++++
T Consensus 208 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~-----~~~~~~~~~~~~~~l~~~L~~~~- 281 (393)
T 1mdo_A 208 KLRSLKFHGLGVDAWDRQSGGRAPQAEVLAPGYKYNLPDLNAAIALAQLQK-----LDALNARRAAIAAQYHQAMADLP- 281 (393)
T ss_dssp HHHHHTBTTEECC-----------CCEESSCCCBCCCCHHHHHHHHHHHHT-----HHHHHHHHHHHHHHHHHHHHTSS-
T ss_pred HHHHHHhcCCcccchhhhcccccccccccccCccCCCCHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHhcCC-
Confidence 665533210 01233333333333332 55666677778888999999885
Q ss_pred CCCCCCC-----CCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCC--------------CC-------CCe
Q 014603 339 ITCPKKP-----EGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITV--------------GL-------KDW 392 (422)
Q Consensus 339 ~~~~~~~-----~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~--------------~~-------~~~ 392 (422)
+.+...+ .++.++|+.++.... + .+..++...+ .++||.+.+|..+ .. ..+
T Consensus 282 ~~~~~~~~~~~~~~~~~~~v~~~~~~~-~-~~~~~l~~~l-~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (393)
T 1mdo_A 282 FQPLSLPSWEHIHAWHLFIIRVDEARC-G-ITRDALMASL-KTKGIGTGLHFRAAHTQKYYRERFPTLTLPDTEWNSERI 358 (393)
T ss_dssp CEECCCCSSCEECCCSCEEEECCHHHH-S-SCHHHHHHHH-HHTTBCCBCCCCCGGGSHHHHHHSTTCCCHHHHHHHTTE
T ss_pred cccccCCCCCCCceeEEEEEEeccccc-c-cCHHHHHHHH-HhCCCCcccccCccccChhhhccCCccCChhHHHHHhCE
Confidence 5532222 345678888863100 0 1466676666 5579999988754 11 347
Q ss_pred EEEEec--cChHHHHHHHHHHHHHHHHh
Q 014603 393 LRITFA--VEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 393 iRis~~--~~~~~l~~~~~~l~~~~~~~ 418 (422)
+|++++ ++++++++++++|+++++.+
T Consensus 359 lRi~~~~~~t~~~i~~~~~~l~~~~~~~ 386 (393)
T 1mdo_A 359 CSLPLFPDMTESDFDRVITALHQIAGQG 386 (393)
T ss_dssp EEECCCTTCCHHHHHHHHHHHHHHHC--
T ss_pred EEecCCCCCCHHHHHHHHHHHHHHHhcC
Confidence 999998 68999999999999988665
No 162
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.97 E-value=2.5e-30 Score=242.48 Aligned_cols=299 Identities=13% Similarity=0.101 Sum_probs=206.9
Q ss_pred CCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCC--EEEecCCCccchHH---HHhhCC
Q 014603 81 NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGA--NILLPRPGFPYYEA---RATHSH 155 (422)
Q Consensus 81 ~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd--~Vl~~~~~~~~~~~---~~~~~g 155 (422)
..|++..+..+++++++++++ . +..++++||++++..++++++.+|| .|+++.++|..... .....|
T Consensus 41 ~~y~~~~~~~~l~~~la~~~~------~--~~~i~~~~G~~a~~~al~~~~~~gd~~~vi~~~~~~~~~~~~~~~~~~~g 112 (357)
T 3lws_A 41 DQYGTGAIIEPFEQKFADVLG------M--DDAVFFPSGTMAQQVALRIWSDETDNRTVAYHPLCHLEIHEQDGLKELHP 112 (357)
T ss_dssp EETTEETTHHHHHHHHHHHHT------C--SEEEEESCHHHHHHHHHHHHHHHHTCCEEEECTTCHHHHSSTTHHHHHSS
T ss_pred ccccCChHHHHHHHHHHHHhC------C--CcEEEecCcHHHHHHHHHHHhhcCCCcEEEecccceeeeeccchhhhccC
Confidence 467776788999999999983 2 3446668889999999999988888 67777666544322 345567
Q ss_pred CeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCc-ccccCHHHHHHHHHHHHHcCcEEEEcccccc--cccCC
Q 014603 156 LEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPC-GNVYTYQHLQKIAETAKKLGIMVIADEVYDH--LAFGN 232 (422)
Q Consensus 156 ~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~npt-G~~~~~~~l~~i~~~~~~~~~~li~D~~~~~--~~~~~ 232 (422)
..++.++. +++.+|++.+++.. +++++++++|+||+ |.+++.+++++|+++|++||++||+|++|.. ..+.+
T Consensus 113 ~~~~~v~~---~~~~~d~~~l~~~~--~~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~ 187 (357)
T 3lws_A 113 IETILVGA---ADRLMTLDEIKALP--DIACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYE 187 (357)
T ss_dssp CEEEECSC---TTSCCCHHHHHTCC--SCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHT
T ss_pred cEEEEecC---CCCCcCHHHHhcCc--CcceEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcC
Confidence 77777763 34568999999873 38899999999998 9999999999999999999999999999862 11112
Q ss_pred CCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhhhc-cCc--chHHHHHHHHHHhh
Q 014603 233 TPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNIS-SDP--ATFIQGAVPQILEK 309 (422)
Q Consensus 233 ~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~a~~~~l~~ 309 (422)
.....+. ...+ +++.|+||+|++++. ||++++ +++++.+....... +.. ....+.++..+++.
T Consensus 188 ~~~~~~~--~~~d--~~~~s~sK~~~~~~g--g~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 253 (357)
T 3lws_A 188 KTAAEIA--GLFD--SIYISFYKGLGGIAG--AILAGP--------AAFCQTARIWKRRYGGDLISLYPYIVSADYYYEL 253 (357)
T ss_dssp CCHHHHH--TTSS--EEEEESSSTTCCSSC--EEEEEC--------HHHHHHHHHHHHHTTCCCSCCHHHHHHHHHHHHH
T ss_pred CChHHHH--hcCC--EEEEeccccCCCCce--EEEEcC--------HHHHHHHHHHHHHhcCCcccchHHHHHHHHHHHH
Confidence 2111111 1111 457899999844332 888875 56777776554322 111 22333344444543
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC
Q 014603 310 TEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL 389 (422)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~ 389 (422)
+.+ ..+++.++++.+.+.|+++|++.+...|..++++|+.++.... .+..++.. .+.++||.+.||..+..
T Consensus 254 ----~~~-~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~l~~~Gi~v~~g~~~~~ 324 (357)
T 3lws_A 254 ----RKD-RMGQYYEQAKQLAEQFNALPGVHTTPEVPVSNMFHLHFDGQAA---DISPKLEQ-VQEETGLGFVGYLVDKD 324 (357)
T ss_dssp ----HTT-CHHHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEEEEESCHH---HHHHHHHH-HHHHHCEESCSCCEECS
T ss_pred ----HHH-HHHHHHHHHHHHHHHHHhCCCCeeccCCCcceEEEEEecCChH---HHHHHHHH-HHHhcCeEEecccccCC
Confidence 222 2344577788999999999888742356778899998864210 01344444 45677999999976653
Q ss_pred -CCeEEEEec-----cChHHHHHHHHHHHHHH
Q 014603 390 -KDWLRITFA-----VEPSALEDGLGRMKAFY 415 (422)
Q Consensus 390 -~~~iRis~~-----~~~~~l~~~~~~l~~~~ 415 (422)
..++|++++ .+.+++++++++|.+++
T Consensus 325 ~~~~~r~~i~~~~~~~~~~~l~~al~~l~~al 356 (357)
T 3lws_A 325 GYCSTEISVGDAYGELDQQTRDAGFARLRQAF 356 (357)
T ss_dssp SEEEEEEEBCTTGGGSCHHHHHHHHHHHHHHC
T ss_pred CceEEEEEecchhhhcCHHHHHHHHHHHHHhc
Confidence 238999986 47799999999998865
No 163
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.97 E-value=1.1e-28 Score=236.15 Aligned_cols=320 Identities=18% Similarity=0.197 Sum_probs=225.8
Q ss_pred CcHHHHHHHHHHhhCCCCCCCCCCCC----CHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHh-cCCCCEE
Q 014603 63 TASVAVDAIVHSVRSARFNCYSSTVG----ILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVL-ARPGANI 137 (422)
Q Consensus 63 ~~~~v~~a~~~~~~~~~~~~y~~~~g----~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l-~~~gd~V 137 (422)
.++++.+++.+.+.......|++..| ..++++.++++++ .+ ++++++||++|+..++.++ +++||+|
T Consensus 14 ~~~~~~~a~~~~~~~~~~~~~~~~~g~~~l~~~l~~~la~~~g------~~--~~i~~~~gt~al~~~~~~~~~~~gd~V 85 (418)
T 2c81_A 14 HSDRTRRKIEEVFQSNRWAISGYWTGEESMERKFAKAFADFNG------VP--YCVPTTSGSTALMLALEALGIGEGDEV 85 (418)
T ss_dssp CCHHHHHHHHHHHHHTCCSTTSBCCSSCCHHHHHHHHHHHHHT------CS--EEEEESCHHHHHHHHHHHTTCCTTCEE
T ss_pred CCHHHHHHHHHHHhcCCccccCcccCCHHHHHHHHHHHHHHhC------CC--cEEEeCCHHHHHHHHHHHcCCCCcCEE
Confidence 47899999999987654434776666 4566666666662 22 5777888899999999999 8999999
Q ss_pred EecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCc
Q 014603 138 LLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGI 217 (422)
Q Consensus 138 l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~ 217 (422)
+++.|+|+++...++..|.+++.+++++ +++.+|++.|++.+++++++++++ ||||.. .++++|.++|+++|+
T Consensus 86 l~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~v~~~---~~~G~~---~~~~~i~~~~~~~~~ 158 (418)
T 2c81_A 86 IVPSLTWIATATAVLNVNALPVFVDVEA-DTYCIDPQLIKSAITDKTKAIIPV---HLFGSM---ANMDEINEIAQEHNL 158 (418)
T ss_dssp EEESSSCTHHHHHHHHTTCEEEEECBCT-TTCSBCHHHHGGGCCTTEEEECCB---CCTTCC---CCHHHHHHHHHHTTC
T ss_pred EECCCccHhHHHHHHHcCCEEEEEecCC-CCCCcCHHHHHHhhCCCCeEEEEe---CCcCCc---ccHHHHHHHHHHCCC
Confidence 9999999999999999999999998864 357799999999998888877754 589987 568899999999999
Q ss_pred EEEEcccccccc-cCCCCCCCccccCCCCCeEEEecC--ccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhhhc--
Q 014603 218 MVIADEVYDHLA-FGNTPFVPMGVFGSIVPVLTLGSI--SKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNIS-- 292 (422)
Q Consensus 218 ~li~D~~~~~~~-~~~~~~~~~~~~~~~~~~i~i~s~--sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 292 (422)
++|+|++|+.+. +++.. +..+. .+.+.|| ||.+++ | |+||+++++ +++.+++.......
T Consensus 159 ~li~D~a~~~~~~~~~~~---~~~~~----~~~~~s~s~~K~~~~-g-~~g~~~~~~-------~~l~~~~~~~~~~~~~ 222 (418)
T 2c81_A 159 FVIEDCAQSHGSVWNNQR---AGTIG----DIGAFSCQQGKVLTA-G-EGGIIVTKN-------PRLFELIQQLRADSRV 222 (418)
T ss_dssp EEEEECTTCTTCEETTEE---TTSSS----SEEEEECCTTSSSCS-S-SCEEEEESC-------HHHHHHHHHHHBTTEE
T ss_pred EEEEECcccccCccCCEe---ccccc----ceEEEeccCCcccCC-C-CeEEEEECC-------HHHHHHHHHHHHhCcc
Confidence 999999999865 44321 22222 1667777 999876 8 999999853 45666666543210
Q ss_pred -----------cC--c---c--------hHHHHHHH-HHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCC
Q 014603 293 -----------SD--P---A--------TFIQGAVP-QILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEG 347 (422)
Q Consensus 293 -----------~~--~---~--------~~~~~a~~-~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~ 347 (422)
.. . . ...+.++. ..+ ..+++..++.+++++.+.+.|+++|++.+...+.+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~~l-----~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~ 297 (418)
T 2c81_A 223 YCDDSSELMHGDMQLVKKGDIQGSNYCLSEFQSAILLDQL-----QELDDKNAIREKNAMFLNDALSKIDGIKVMKRPPQ 297 (418)
T ss_dssp ECSCGGGCCTTCBSEEECCSSCCCBCCCCHHHHHHHHHHH-----TTHHHHHHHHHHHHHHHHHHHTTSTTEEECCCCTT
T ss_pred ccccccccccchhhccccccccCcCCCcCHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhccCCCcccCCCCCC
Confidence 00 0 0 01111111 112 23566777778888999999999888774323444
Q ss_pred -ceE----EEEecCcccccCCCCHHHHHHHHHHhcCeE---EecCCCCC-----------------------------C-
Q 014603 348 -SMF----VMVKLNYSLLEGINSDMEFALKLAKEESVI---VLPGITVG-----------------------------L- 389 (422)
Q Consensus 348 -g~~----~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~---v~~g~~~~-----------------------------~- 389 (422)
+.. +.+.++.....+ .+..++...|.+++||. +.++..+. .
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~L~~~~gI~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (418)
T 2c81_A 298 VSRQTYYGYVFRFDPVKFGG-LNADQFCEILREKLNMGTFYLHPPYLPVHKNPLFCPWTKNRYLKSVRKTEAYWRGLHYP 376 (418)
T ss_dssp EEECCCSEEEEEECGGGTTT-CCHHHHHHHHHHHHTCCTTTEECCCCCGGGCTTCCGGGCTTSCHHHHCCHHHHHTCCCH
T ss_pred CcccccEEEEEEEccccccc-cCHHHHHHHHHHcCCCCcccccccccccccCchhcccccccccccccccccccccCCCh
Confidence 222 225554210001 25667777765544999 88875220 0
Q ss_pred ------CCeEEEEec--c-ChHHHHHHHHHHHHHHHHhc
Q 014603 390 ------KDWLRITFA--V-EPSALEDGLGRMKAFYDRHA 419 (422)
Q Consensus 390 ------~~~iRis~~--~-~~~~l~~~~~~l~~~~~~~~ 419 (422)
.+.+|++++ + +++|++++++.|+++++++.
T Consensus 377 ~~~~~~~~~lrl~~~~~~gt~edi~~~~~~l~~~~~~~~ 415 (418)
T 2c81_A 377 VSERASGQSIVIHHAILLAEPSHLSLLVDAVAELARKFC 415 (418)
T ss_dssp HHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhCEEEecCCccCCCHHHHHHHHHHHHHHHHhhc
Confidence 148999997 7 89999999999999987654
No 164
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.97 E-value=6.7e-30 Score=248.03 Aligned_cols=333 Identities=11% Similarity=0.077 Sum_probs=231.8
Q ss_pred CCceeecCCCCCCCCCCCCcHHHHHHHHHHhhC----CC---CCCCCC-CCCCHHHHHHHHHHHhhcCCCCCCCCCEEEe
Q 014603 45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRS----AR---FNCYSS-TVGILPARRAIADYLNRDLPYKLSPDDVYLT 116 (422)
Q Consensus 45 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~----~~---~~~y~~-~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~ 116 (422)
++.|.|+.+... +.++.+.+++.+.+.. +. ...|.+ .....++++++++++ +.++++|++|
T Consensus 66 ~~~iyld~~~~g-----~~p~~v~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~v~~t 134 (465)
T 3e9k_A 66 ENAIYFLGNSLG-----LQPKMVKTYLEEELDKWAKIAAYGHEVGKRPWITGDESIVGLMKDIV------GANEKEIALM 134 (465)
T ss_dssp CBCEECBTTTSC-----CEETTHHHHHHHHHHHHHHHGGGGGTSSSSCGGGTTHHHHGGGHHHH------TCCGGGEEEC
T ss_pred CCeEEecCCccC-----CChHHHHHHHHHHHHHHHhhCCcccccCCccHHHhHHHHHHHHHHHc------CCCcCCEEEE
Confidence 567899888744 3345555555444321 11 112222 234577899999988 4578899999
Q ss_pred cCHHHHHHHHHHHhcCCCC---EEEecCCCccch----HHHHhhCCCeEEE--eeccC-CCCcccCHHHHHHhhc---CC
Q 014603 117 LGCTQAIEVILTVLARPGA---NILLPRPGFPYY----EARATHSHLEVRH--FDLLP-AKGWEVDLDAVEALAD---EN 183 (422)
Q Consensus 117 ~g~~~a~~~~~~~l~~~gd---~Vl~~~~~~~~~----~~~~~~~g~~~~~--~~~~~-~~~~~~d~~~l~~~~~---~~ 183 (422)
+|++++++.++.++.++|+ +|+++.|+|++. ...++..|.++.. +.+.+ ++++.+|+++|++.++ ++
T Consensus 135 ~g~t~al~~~~~~~~~~~~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~~ 214 (465)
T 3e9k_A 135 NALTVNLHLLMLSFFKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLNIEESMRMIKPREGEETLRIEDILEVIEKEGDS 214 (465)
T ss_dssp SCHHHHHHHHHHHHCCCCSSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHHHEEEECCCTTCSSCCHHHHHHHHHHHGGG
T ss_pred CCHHHHHHHHHHHhccccCCCCEEEEcCCcCCchHHHHHHHHHHcCCcceeeeEEEecCCCCCccCHHHHHHHHHhcCCC
Confidence 9999999999999987665 499999999874 3356667877521 12212 2456789999999885 57
Q ss_pred ceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccC-CCCc
Q 014603 184 TVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWI-VPGW 262 (422)
Q Consensus 184 ~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~-~~G~ 262 (422)
++++++++|+||||.+++ +++|.++|+++|+++|+|++|+. |.....+...+.+ ++++|++|++. +|+
T Consensus 215 ~~lv~~~~~~n~tG~~~~---l~~i~~la~~~g~~vi~D~a~~~----g~~~~~~~~~~~D---~~~~s~~K~l~~gp~- 283 (465)
T 3e9k_A 215 IAVILFSGVHFYTGQHFN---IPAITKAGQAKGCYVGFDLAHAV----GNVELYLHDWGVD---FACWCSYKYLNAGAG- 283 (465)
T ss_dssp EEEEEEESBCTTTCBBCC---HHHHHHHHHHTTCEEEEECTTTT----TTSCCCHHHHTCC---EEEECSSSTTCCCTT-
T ss_pred eEEEEEeCcccCcceeec---HHHHHHHHHHcCCEEEEEhhhhc----CCcCCchhhcCCC---EEEECcccccccCCC-
Confidence 889999999999999976 67888899999999999999975 3333333334433 88899999973 343
Q ss_pred eeEEEEeeCCCCcccchhHHHHHHhh--------------------------hhhccCcchHHHHHHHHHHhhchHHHHH
Q 014603 263 RLGWLVTSDPNGILQDSGIVDSIKSF--------------------------LNISSDPATFIQGAVPQILEKTEEEFFS 316 (422)
Q Consensus 263 r~G~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~a~~~~l~~~~~~~~~ 316 (422)
++|++++++ ++.+.+... ....++++.+...++.++++...+..++
T Consensus 284 ~~g~l~~~~--------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~aal~~~~~~~~~ 355 (465)
T 3e9k_A 284 GIAGAFIHE--------KHAHTIKPALVGWFGHELSTRFKMDNKLQLIPGVCGFRISNPPILLVCSLHASLEIFKQATMK 355 (465)
T ss_dssp CCCEEEECG--------GGTTTSCCSSCCGGGBCHHHHTTCCSCCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHHHHCHH
T ss_pred ceEEEEEcH--------HHHhhcCCcccCccCCCCCcccccCCCcCcCCChHHhccCCccHHHHHHHHHHHHHHHHcCHH
Confidence 688888853 222222110 0012366777777777777754444588
Q ss_pred HHHHHHHHHHHHHHHHhhcC----------CCCCCCCCCC----CceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEe
Q 014603 317 KITDILRETADICCDRLKEI----------PCITCPKKPE----GSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVL 382 (422)
Q Consensus 317 ~~~~~~~~~~~~l~~~L~~~----------~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~ 382 (422)
+.+++..++++++.+.|+++ +++.+. .|. .|.++++.++. +..++...+ .++||.+.
T Consensus 356 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~-~p~~~~~~g~~~~~~~~~-------~~~~l~~~L-~~~Gi~v~ 426 (465)
T 3e9k_A 356 ALRKKSVLLTGYLEYLIKHNYGKDKAATKKPVVNII-TPSHVEERGCQLTITFSV-------PNKDVFQEL-EKRGVVCD 426 (465)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCC---------CEEEC-SCSSGGGBCSCEEEEECC-------TTCCHHHHH-HTTTEECE
T ss_pred HHHHHHHHHHHHHHHHHHhhccccccccCCCCeEEe-CCCCHhhcccEEEEEecC-------CHHHHHHHH-HHCCEEEe
Confidence 89999999999999999884 677733 454 26677777762 234566666 45699987
Q ss_pred cCCCCCCCCeEEEEe-c--cChHHHHHHHHHHHHHHHHhcc
Q 014603 383 PGITVGLKDWLRITF-A--VEPSALEDGLGRMKAFYDRHAK 420 (422)
Q Consensus 383 ~g~~~~~~~~iRis~-~--~~~~~l~~~~~~l~~~~~~~~~ 420 (422)
. ..++++|+++ + ++.++++++++.|++++++..+
T Consensus 427 ~----~~~~~iRis~~~~~~t~edi~~~~~~l~~~l~~~~~ 463 (465)
T 3e9k_A 427 K----RNPNGIRVAPVPLYNSFHDVYKFTNLLTSILDSAET 463 (465)
T ss_dssp E----ETTTEEEEBCCTTTCCHHHHHHHHHHHHHHHTC---
T ss_pred c----CCCCEEEEeCcccCCCHHHHHHHHHHHHHHHHhccc
Confidence 3 2368999998 4 7899999999999999876544
No 165
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.97 E-value=1.5e-29 Score=245.84 Aligned_cols=346 Identities=13% Similarity=0.076 Sum_probs=234.5
Q ss_pred CCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCC------CCCCCCHHHHHHHHHHHhhcCCCCCCC--CCEEEe
Q 014603 45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCY------SSTVGILPARRAIADYLNRDLPYKLSP--DDVYLT 116 (422)
Q Consensus 45 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y------~~~~g~~~lr~~ia~~l~~~~~~~~~~--~~i~~~ 116 (422)
.+.|+|..+. -++++.+++++.+.+.+.....| .......++++.+.+++.+.+|...+. .+|+++
T Consensus 44 ~~~i~L~a~e------~~~~~~V~eA~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~a~~~g~~~~~~~~~V~~~ 117 (483)
T 1rv3_A 44 RVGLELIASE------NFASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQKRALQAYGLDPQCWGVNVQPY 117 (483)
T ss_dssp HSSEECCTTC------CCCCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHTTCCTTTEEEECCCS
T ss_pred hcCeEEEcCC------CCCCHHHHHHHHHHHhccCcccCCCccccCcchhHHHHHHHHHHHHHHHhCCCcccCceEEEEC
Confidence 4678996664 24679999999988865322123 222345677877777777766543211 237777
Q ss_pred cCHHHHHHHHHHHhcCCCCEEEecCCCccchHHH--------HhhCC--CeEEEeeccCCCCcccCHHHHHHhhc-CCce
Q 014603 117 LGCTQAIEVILTVLARPGANILLPRPGFPYYEAR--------ATHSH--LEVRHFDLLPAKGWEVDLDAVEALAD-ENTV 185 (422)
Q Consensus 117 ~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~--------~~~~g--~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~ 185 (422)
+|+ +++.+++.++++|||+|+++++.|.++... +...| ...+.+++++ +++.+|++.|++.++ ++++
T Consensus 118 sGs-~an~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~~~~-~~~~iD~d~le~~i~~~~tk 195 (483)
T 1rv3_A 118 SGS-PANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNP-DTGYIDYDRLEENARLFHPK 195 (483)
T ss_dssp SHH-HHHHHHHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBCT-TTCSBCHHHHHHHHHHHCCS
T ss_pred CcH-HHHHHHHHHhcCCCCEEEEecCccCcCcchhhhhcccCcccccceEEEEECcccc-CCCcCCHHHHHHHHhhcCCc
Confidence 777 888888999999999999999998766431 22333 3444444443 357799999999987 6889
Q ss_pred EEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEccccc-ccccCCCCCCCccccCCCCCeEEEecCccccCCCCcee
Q 014603 186 ALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYD-HLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRL 264 (422)
Q Consensus 186 ~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~-~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~ 264 (422)
++++ +++|++ .++ ++++|.++|+++|+++|+|++|. ++.+.+....++. .. .+++.|+||++ .|+|.
T Consensus 196 lIi~-~~sn~~-~~~---dl~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~p~~--~~---div~~s~~K~l--~Gprg 263 (483)
T 1rv3_A 196 LIIA-GTSCYS-RNL---DYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFE--HC---HVVTTTTHKTL--RGCRA 263 (483)
T ss_dssp EEEE-CCSSCC-SCC---CHHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGGG--TC---SEEEEESSGGG--CCCSC
T ss_pred EEEE-eCCcCC-CcC---CHHHHHHHHHHcCCEEEEEccchhcccccCCCCCCCC--CC---cEEEecCcccC--CCCCc
Confidence 8888 888888 665 48889999999999999999986 3333332222221 12 28889999985 57788
Q ss_pred EEEEeeCCCCcccch-------hHHHHHHhhh--hhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhc
Q 014603 265 GWLVTSDPNGILQDS-------GIVDSIKSFL--NISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKE 335 (422)
Q Consensus 265 G~~~~~~~~~~~~~~-------~~~~~~~~~~--~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 335 (422)
|++++++........ ++...+.... ...++++...+.+...+++...+.++++..+++.++++.+.+.|++
T Consensus 264 G~i~~~~~~~~~~~~~g~~~~y~~~~~~~~~~~~~~~g~~~~~~iaal~~Al~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 343 (483)
T 1rv3_A 264 GMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFKEYQRQVVANCRALSAALVE 343 (483)
T ss_dssp EEEEEECSBCC-------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEcchhhhhccccCcchhhHHHHHhhhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHh
Confidence 999997531000000 2333333322 1234566666666666776543456788899999999999999998
Q ss_pred CCCCCCCCCCC-CceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEe----cCCCCC-CCCeEEEEec--cC----hHH
Q 014603 336 IPCITCPKKPE-GSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVL----PGITVG-LKDWLRITFA--VE----PSA 403 (422)
Q Consensus 336 ~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~----~g~~~~-~~~~iRis~~--~~----~~~ 403 (422)
+ ++.++ .+. ...+.|+.+... + .+..++ ..++++.||.+. ||..+. ..+++||+++ ++ +++
T Consensus 344 ~-g~~~~-~~~~~~~~~~v~~~~~---g-~~~~~~-~~~L~~~gI~v~~~~~pg~~~~~~~~~iRis~~~~~t~g~~~ed 416 (483)
T 1rv3_A 344 L-GYKIV-TGGSDNHLILVDLRSK---G-TDGGRA-EKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEKD 416 (483)
T ss_dssp T-TCEEG-GGSCSSSEEEEEGGGG---T-CCHHHH-HHHHHHTTEECEEECCSSCSCTTSCCEEEEECHHHHHTTCCHHH
T ss_pred c-CCEec-cCCCCCceEEEeccCC---C-CCHHHH-HHHHHhCCcEEecCCCCCCCcCCCCceEEeecCCcccCCCCHHH
Confidence 8 77743 332 345778777532 1 145555 445577899999 887432 2579999997 45 899
Q ss_pred HHHHHHHHHHHHHH
Q 014603 404 LEDGLGRMKAFYDR 417 (422)
Q Consensus 404 l~~~~~~l~~~~~~ 417 (422)
+++++++|.++++.
T Consensus 417 i~~~~~~l~~~l~~ 430 (483)
T 1rv3_A 417 FQKVAHFIHRGIEL 430 (483)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998876
No 166
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.97 E-value=2.8e-29 Score=236.87 Aligned_cols=324 Identities=15% Similarity=0.186 Sum_probs=229.7
Q ss_pred CCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHH
Q 014603 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI 123 (422)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~ 123 (422)
+.++++|+.+.|. ..+ +.+++.+.+... .|.+..+..++|+.++++++ .+++++++||++|+
T Consensus 5 ~~~~~~l~~~~~~------~~~-~~~~~~~~~~~~---~~~~~~~~~~l~~~la~~~~--------~~~~~~~~~gt~a~ 66 (374)
T 3uwc_A 5 RVPYSYLERQFAD------IEP-YLNDLREFIKTA---DFTLGAELEKFEKRFAALHN--------APHAIGVGTGTDAL 66 (374)
T ss_dssp CBCSCCHHHHTSS------CHH-HHHHHHHHHHHT---CCSSCHHHHHHHHHHHHHTT--------CSEEEEESCHHHHH
T ss_pred cceeeccccCCCC------chH-HHHHHHHHHHcC---CcccChhHHHHHHHHHHHhC--------CCcEEEeCCHHHHH
Confidence 3557888888744 234 888888877653 46666788999999999983 23889999999999
Q ss_pred HHHHHHh-cCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCH
Q 014603 124 EVILTVL-ARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTY 202 (422)
Q Consensus 124 ~~~~~~l-~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~ 202 (422)
+.++.++ +++||+|+++.|+|+++...++..|.+++.++.+ +++.+|++.+++.+++++++++ |+||||...
T Consensus 67 ~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~d~~~l~~~~~~~~~~v~---~~n~~G~~~-- 139 (374)
T 3uwc_A 67 AMSFKMLNIGAGDEVITCANTFIASVGAIVQAGATPVLVDSE--NGYVIDPEKIEAAITDKTKAIM---PVHYTGNIA-- 139 (374)
T ss_dssp HHHHHHTTCCTTCEEEEESSSCHHHHHHHHHTTCEEEEECBC--TTSSBCGGGTGGGCCTTEEEEC---CBCGGGCCC--
T ss_pred HHHHHHcCCCCCCEEEECCCccHHHHHHHHHcCCEEEEEecC--CCCCcCHHHHHHhCCCCceEEE---EeCCcCCcC--
Confidence 9999999 8999999999999999999999999999999876 4567899999999988777666 899999985
Q ss_pred HHHHHHHHHHHHcCcEEEEcccccccc-cCCCCCCCccccCCCCCeEEEecCc--cccCCCCceeEEEEeeCCCCcccch
Q 014603 203 QHLQKIAETAKKLGIMVIADEVYDHLA-FGNTPFVPMGVFGSIVPVLTLGSIS--KRWIVPGWRLGWLVTSDPNGILQDS 279 (422)
Q Consensus 203 ~~l~~i~~~~~~~~~~li~D~~~~~~~-~~~~~~~~~~~~~~~~~~i~i~s~s--K~~~~~G~r~G~~~~~~~~~~~~~~ 279 (422)
++++|.++|+++|+++|+|++|+.+. +.+. ....+ . .+++.|+| |+++++|. .|++++++ +
T Consensus 140 -~~~~i~~~~~~~~~~li~D~~~~~g~~~~~~---~~~~~-~---d~~~~s~~~~K~l~~~g~-~g~~~~~~-------~ 203 (374)
T 3uwc_A 140 -DMPALAKIAKKHNLHIVEDACQTILGRINDK---FVGSW-G---QFACFSLHPLKNLNVWSD-AGVIITHS-------D 203 (374)
T ss_dssp -CHHHHHHHHHHTTCEEEEECTTCTTCEETTE---ETTSS-S---SEEEEECSSSSSSCCSSC-CEEEEESC-------H
T ss_pred -CHHHHHHHHHHcCCEEEEeCCCccCceeCCe---ecccc-c---cEEEEeCCCCCcCCccce-eEEEEeCC-------H
Confidence 48888999999999999999998633 2221 11111 1 27778866 99766565 78888764 4
Q ss_pred hHHHHHHhhhhh-------------ccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCC-CCCCCCC
Q 014603 280 GIVDSIKSFLNI-------------SSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPC-ITCPKKP 345 (422)
Q Consensus 280 ~~~~~~~~~~~~-------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~-~~~~~~~ 345 (422)
++.+.+...... ....+.+..++....+ ..+++..++.+++.+.+.+.|+++++ +.+...+
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~~-----~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 278 (374)
T 3uwc_A 204 EYAEKLRLYRNHGLINRDVCVEYGINCRMDTIQAVIANRLM-----NQLETITEKRRGIAHLYDQSFVDLSEFIDVPVRR 278 (374)
T ss_dssp HHHHHHHHHTBTTEEETTEESSCCCBCBCCHHHHHHHHHHG-----GGHHHHHHHHHHHHHHHHHHTGGGTTTEECCCCC
T ss_pred HHHHHHHHHHhcCccccCccccccccCCCCHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhccCCCeEEeccCC
Confidence 566666554321 0111222222222222 23566777788888999999998876 6533233
Q ss_pred CCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC-----------------------CCeEEEEec--cC
Q 014603 346 EGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL-----------------------KDWLRITFA--VE 400 (422)
Q Consensus 346 ~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~-----------------------~~~iRis~~--~~ 400 (422)
..+...|..++... .+..++...+ .++||.+.++..... .+.+|++++ ++
T Consensus 279 ~~~~~~~~~~~~~~----~~~~~l~~~L-~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t 353 (374)
T 3uwc_A 279 EGVYHVFHIYVLRV----KYRDQLFQYL-KDNGIEVKIHYPIAMHLQPAAKSLGYQQGDFPMAEKHGEAVITLPAHPYLT 353 (374)
T ss_dssp TTEECCCSSEEEEE----TTHHHHHHHH-HHTTBCCBCSCSSCGGGSGGGGGGCCCTTSCHHHHHHHHHEEEECCCTTSC
T ss_pred CCCceeeEEEEEEc----CCHHHHHHHH-HHCCCccccCCCCccccChhhhhcCCccCCCccHHHHHhCEEEccCCCCCC
Confidence 33222221111110 1455666665 566999998861100 167999987 78
Q ss_pred hHHHHHHHHHHHHHHHHh
Q 014603 401 PSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 401 ~~~l~~~~~~l~~~~~~~ 418 (422)
+++++++++.|++++++.
T Consensus 354 ~edi~~~~~~l~~~l~~~ 371 (374)
T 3uwc_A 354 EEEINYIIKKVREFYLEK 371 (374)
T ss_dssp HHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHhh
Confidence 999999999999998764
No 167
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.97 E-value=3.6e-30 Score=241.57 Aligned_cols=329 Identities=14% Similarity=0.062 Sum_probs=222.8
Q ss_pred CCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHH
Q 014603 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI 123 (422)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~ 123 (422)
.-..+.++.+.. .++++|++.+++.+.+.. ..|.+..+..+++++++++++ . +..++++||++++
T Consensus 12 ~~~~~~~~~~~~----~~g~~p~v~~ai~~~~~~---~~~~~~~~~~~l~~~la~~~~------~--~~~i~~~~g~~a~ 76 (359)
T 3pj0_A 12 KTPYKLGGNGPR----NVGVLTEALQNIDDNLES---DIYGNGAVIEDFETKIAKILG------K--QSAVFFPSGTMAQ 76 (359)
T ss_dssp TCSEESSSSSCC----BHHHHHHHTTTSCTTCBC---CBTTBSHHHHHHHHHHHHHHT------C--SEEEEESCHHHHH
T ss_pred hcchhhcCCCcc----ccCCCHHHHHHHHhhccc---CcccCCHHHHHHHHHHHHHhC------C--CcEEEeCCHHHHH
Confidence 344455555552 245678888888774432 357666778999999999983 2 2346668889999
Q ss_pred HHHHHHhcCCCCE--EEecCCCccchH---HHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCc-c
Q 014603 124 EVILTVLARPGAN--ILLPRPGFPYYE---ARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPC-G 197 (422)
Q Consensus 124 ~~~~~~l~~~gd~--Vl~~~~~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~npt-G 197 (422)
..++.+++.+||+ |+++.++|.... ..+...|.+++.++. +++.+|++.|++. .++++++++++|+||+ |
T Consensus 77 ~~a~~~~~~~g~~~vvi~~~~~~~~~~~~~~~~~~~g~~~~~v~~---~~~~~d~~~l~~~-~~~~~~v~~~~p~n~~~G 152 (359)
T 3pj0_A 77 QIALRIWADRKENRRVAYHPLSHLEIHEQDGLKELQQITPLLLGT---ANQLLTIDDIKSL-REPVSSVLIELPQREIGG 152 (359)
T ss_dssp HHHHHHHHHHHTCCEEEECTTCHHHHSSTTHHHHHHCCEEEECSC---TTSCCCHHHHHTC-SSCCSEEEEESSBGGGTS
T ss_pred HHHHHHHHhcCCCcEEEEeccceeeehhcchHHHhcCceEEecCC---cCCCcCHHHHHhc-cCCceEEEEEecccCCCc
Confidence 9999999888886 555555553322 222456888887765 3457899999988 7789999999999988 7
Q ss_pred cccCHHHHHHHHHHHHHcCcEEEEccccccccc--CCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCc
Q 014603 198 NVYTYQHLQKIAETAKKLGIMVIADEVYDHLAF--GNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGI 275 (422)
Q Consensus 198 ~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~--~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~ 275 (422)
.+++.+++++|+++|++||++||+|++|..... .+.....+. ...+ +++.|+||++++++ + |+++.+
T Consensus 153 ~~~~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~---~~~d-~~~~s~sK~~~~~~-g-g~~~~~----- 221 (359)
T 3pj0_A 153 QLPAFEELEKISEYCHEQGISLHLDGARLWEITPFYQKSAEEIC---ALFD-SVYVSFYKGIGGIA-G-AILAGN----- 221 (359)
T ss_dssp BCCCHHHHHHHHHHHHHHTCEEEEEETTCGGGHHHHTCCHHHHH---TTCS-EEEEESSSTTCCSS-C-EEEEEC-----
T ss_pred ccCCHHHHHHHHHHHHHcCCEEEEECcchhcchhhhCCCHHHhh---ccCC-EEEEeccccCCCcc-e-EEEECC-----
Confidence 999999999999999999999999999865321 121111111 1112 55669999876653 2 666664
Q ss_pred ccchhHHHHHHhhhhhc-cCc--chHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEE
Q 014603 276 LQDSGIVDSIKSFLNIS-SDP--ATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVM 352 (422)
Q Consensus 276 ~~~~~~~~~~~~~~~~~-~~~--~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~ 352 (422)
+++++++....... +.. ....+.++..+++. .. +..+++.++++.+.+.|+++|++.+...|..++++|
T Consensus 222 ---~~l~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~----~~-~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~ 293 (359)
T 3pj0_A 222 ---DDFVQEAKIWKRRYGGDLISLYPYILSADYYFEK----RI-GKMAEYFEAAKGLAERFNSCSGVKTVPEVPVSNMFH 293 (359)
T ss_dssp ---HHHHHHHHHHHHHTTCCCSCCHHHHHHHHHHHHH----HG-GGHHHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEE
T ss_pred ---HHHHHHHHHHHHHhCCCcchhHHHHHHHHHHHHH----HH-HHhHHHHHHHHHHHHHHhhCCCceeeccCCcceEEE
Confidence 57888877644221 111 22233333344433 12 334456788889999999998887423566777888
Q ss_pred EecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEec-----cChHHHHHHHHHHHHH
Q 014603 353 VKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL--KDWLRITFA-----VEPSALEDGLGRMKAF 414 (422)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRis~~-----~~~~~l~~~~~~l~~~ 414 (422)
+.++.... .+..++.. .+.++||.+.||..|+. .+++|++++ .+.+++++++++|.++
T Consensus 294 ~~~~~~~~---~~~~~l~~-~l~~~GV~v~~g~~~~~~~~~~~r~~i~~~~~~~~~e~l~~~l~~l~~~ 358 (359)
T 3pj0_A 294 VYFENSAD---EIGAILTK-IQDETGVGISGYLQEKSADVCAFEVSVGDAFAEIPAKNLELVFRCLEKE 358 (359)
T ss_dssp EEESSCHH---HHHHHHHH-HHHHHCEECCSCCEEEETTEEEEEEECCTTGGGSCHHHHHHHHHHHHHH
T ss_pred EEecCccc---hhHHHHHH-HHHhcCcEecCCccccCCCceEEEEEecCccccCCHHHHHHHHHHHHhc
Confidence 87763210 01334444 45677999999987654 358999886 4689999999998875
No 168
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.97 E-value=1.5e-29 Score=244.79 Aligned_cols=334 Identities=13% Similarity=0.080 Sum_probs=218.0
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 122 (422)
++..+|||+.|.+....++ .+|.+.+++.+++.... .|. +..++++.+++++.+.++ .+++|++++|+++|
T Consensus 55 ~g~~~iD~~~~~~~~~lg~-~~~~v~~a~~~~~~~~~--~~~---~~~~~~~~la~~l~~~~~---~~~~v~~~~gg~eA 125 (453)
T 2cy8_A 55 DGNVYLDFFGGHGALVLGH-GHPRVNAAIAEALSHGV--QYA---ASHPLEVRWAERIVAAFP---SIRKLRFTGSGTET 125 (453)
T ss_dssp TCCEEEESCTTTTSCTTCB-TCHHHHHHHHHHHTTTC--SSC---SSCHHHHHHHHHHHHHCT---TCSEEEEESCHHHH
T ss_pred CCCEEEECcccHhhcccCC-CCHHHHHHHHHHHHhCC--CCC---CCCHHHHHHHHHHHhhCC---CCCEEEEeCCHHHH
Confidence 4778899998875533333 68999999999987632 232 356899999999987654 57899999999999
Q ss_pred HHHHHHH---hcCCCCEEEecCCCccchHHHHhh-C----------CCe------EEEeeccCCCCcccCHHHHHHhhcC
Q 014603 123 IEVILTV---LARPGANILLPRPGFPYYEARATH-S----------HLE------VRHFDLLPAKGWEVDLDAVEALADE 182 (422)
Q Consensus 123 ~~~~~~~---l~~~gd~Vl~~~~~~~~~~~~~~~-~----------g~~------~~~~~~~~~~~~~~d~~~l~~~~~~ 182 (422)
++.++++ +.++ +.|++.+|+|+++...+.. . |.. +..++ + .|++.|++.+++
T Consensus 126 ~~~al~~ar~~~~~-~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~------~-~d~~~le~~l~~ 197 (453)
T 2cy8_A 126 TLLALRVARAFTGR-RMILRFEGHYHGWHDFSASGYNSHFDGQPAPGVLPETTANTLLIR------P-DDIEGMREVFAN 197 (453)
T ss_dssp HHHHHHHHHHHHCC-CEEEEECC----------------------------CGGGEEEEC------T-TCHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCC-CEEEEEcCCcCCCchhhHhhcCCccCCCcCCCCCccccCceeecC------C-CCHHHHHHHHHh
Confidence 9999987 6654 7888999999876543322 1 221 11121 1 388999988763
Q ss_pred --CceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccC
Q 014603 183 --NTVALVIINP-GNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWI 258 (422)
Q Consensus 183 --~~~~i~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~ 258 (422)
...++++++| +|++|.+ .+.+++++|.++|++||+++|+||+|+++ +.|.. ..+..++...+ +.|+||.++
T Consensus 198 ~~~~~~~vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~~-~~~~~~~~~~d---i~s~sK~l~ 272 (453)
T 2cy8_A 198 HGSDIAAFIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVISGF-RVGNH-GMQALLDVQPD---LTCLAKASA 272 (453)
T ss_dssp HGGGEEEEEECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTTTT-TTCTT-HHHHHHTCCCS---EEEEEGGGG
T ss_pred cCCCEEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcccc-ccCch-hhhHHhCCCCc---EEEEChhhh
Confidence 2345566777 4679976 47999999999999999999999999976 44431 11222222222 338899986
Q ss_pred CCCceeEEEEeeCCCCcccchhHHHHHHh---h---hhhccCcchHHHHHHHHHHhh-chHHHHHHHHHHHHHHHHHHHH
Q 014603 259 VPGWRLGWLVTSDPNGILQDSGIVDSIKS---F---LNISSDPATFIQGAVPQILEK-TEEEFFSKITDILRETADICCD 331 (422)
Q Consensus 259 ~~G~r~G~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~~l~~ 331 (422)
+ |+|+||++++ +++++.+.. . ...+.++++++++++.++|+. . .++..++++++++.+++
T Consensus 273 ~-G~~~G~v~~~--------~~~~~~l~~~~~~~~~~~~t~~~n~~~~aa~~aal~~~~----~~~~~~~~~~~~~~l~~ 339 (453)
T 2cy8_A 273 G-GLPGGILGGR--------EDVMGVLSRGSDRKVLHQGTFTGNPITAAAAIAAIDTIL----EDDVCAKINDLGQFARE 339 (453)
T ss_dssp T-TSSCEEEEEC--------HHHHTTSSSCC---------CCCCHHHHHHHHHHHHHHH----HTTHHHHHHHHHHHHHH
T ss_pred C-CcceEEEech--------HHHHHHhccccCCCceeCCCCCCCHHHHHHHHHHHHHHh----hhhHHHHHHHHHHHHHH
Confidence 4 8999999986 456665544 1 222346788889888888874 3 13345566666667766
Q ss_pred HhhcCC---CCCCCCCCCCceEEEEecCc-----c----cccC-----CCCHHHHHHHHHHhcCeEEecCCCCCCCCeEE
Q 014603 332 RLKEIP---CITCPKKPEGSMFVMVKLNY-----S----LLEG-----INSDMEFALKLAKEESVIVLPGITVGLKDWLR 394 (422)
Q Consensus 332 ~L~~~~---~~~~~~~~~~g~~~~~~~~~-----~----~~~~-----~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iR 394 (422)
.|+++. ++... .+..|.++|+.++. . .... .....++...++ ++||.+.|+ +.+|
T Consensus 340 ~L~~~~~~~~~~~~-~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~Gv~v~~~------~~~~ 411 (453)
T 2cy8_A 340 AMNHLFARKGLNWL-AYGRFSGFHLMPGLPPNTTDTGSITRAEVARPDVKMIAAMRMALI-LEGVDIGGR------GSVF 411 (453)
T ss_dssp HHHHHHHHTTCCEE-EECCTTEEEEEETSCTTCCCCHHHHTTCSCCCCHHHHHHHHHHHH-HTTEECBTT------TEEE
T ss_pred HHHHHHhhCCCcEE-EEEeeeEEEEEEeccccccccccccccccccccHHHHHHHHHHHH-HCCeEEeCC------CCEE
Confidence 665431 22211 34456788888863 1 0000 001345666665 569999653 2477
Q ss_pred EEeccChHHHHHHHHHHHHHHHHhc
Q 014603 395 ITFAVEPSALEDGLGRMKAFYDRHA 419 (422)
Q Consensus 395 is~~~~~~~l~~~~~~l~~~~~~~~ 419 (422)
+++.++++++++++++|+++++++.
T Consensus 412 l~~~~t~~~i~~~l~~l~~~l~~~~ 436 (453)
T 2cy8_A 412 LSAQHEREHVEHLVTTFDRVLDRLA 436 (453)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred eeccCCHHHHHHHHHHHHHHHHHHH
Confidence 7766899999999999999988764
No 169
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.97 E-value=9.8e-30 Score=244.70 Aligned_cols=336 Identities=13% Similarity=0.091 Sum_probs=223.8
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 122 (422)
++..+|||+.|.+....++ .+|.+.+++.+++.......|.. ....++++.+++++ + .+++|++++|+++|
T Consensus 54 ~g~~~lD~~~~~~~~~lG~-~~~~v~~a~~~~~~~~~~~~~~~-~~~~~l~~~la~~~------~-~~~~v~~~~sgseA 124 (434)
T 2epj_A 54 DGARIVDLVLAYGPLILGH-KHPRVLEAVEEALARGWLYGAPG-EAEVLLAEKILGYV------K-RGGMIRFVNSGTEA 124 (434)
T ss_dssp TCCEEEESSGGGTTCTTCB-TCHHHHHHHHHHHHTCSCCSSCC-HHHHHHHHHHHHHH------C-TTCEEEEESSHHHH
T ss_pred CCCEEEEcccchhcccCCC-CCHHHHHHHHHHHHhCCCCCCCC-HHHHHHHHHHHHhC------C-CCCEEEEeCCHHHH
Confidence 5778999998875432333 68999999999997743223322 22345555555554 2 46899999999999
Q ss_pred HHHHHHH---hcCCCCEEEecCCCccchHHHHh-h-------------CCC------eEEEeeccCCCCcccCHHHHHHh
Q 014603 123 IEVILTV---LARPGANILLPRPGFPYYEARAT-H-------------SHL------EVRHFDLLPAKGWEVDLDAVEAL 179 (422)
Q Consensus 123 ~~~~~~~---l~~~gd~Vl~~~~~~~~~~~~~~-~-------------~g~------~~~~~~~~~~~~~~~d~~~l~~~ 179 (422)
++.+++. +. +++.|++.+++|+++...+. . .|. .+..++. .|++.|++.
T Consensus 125 ~~~al~~ar~~~-~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-------~d~~~le~~ 196 (434)
T 2epj_A 125 TMTAIRLARGYT-GRDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTLVTPY-------NDVEALERV 196 (434)
T ss_dssp HHHHHHHHHHHH-CCCEEEEEETCCCCSSGGGSEECC------CEESSTTCCHHHHTTEEEEET-------TCHHHHHHH
T ss_pred HHHHHHHHHHhh-CCCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCCCCCcccCceEecCC-------CCHHHHHHH
Confidence 9999987 44 45788899999988644322 1 122 1333331 278899888
Q ss_pred hcC--CceEEEEeCC-CCCccccc-CHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCcc
Q 014603 180 ADE--NTVALVIINP-GNPCGNVY-TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISK 255 (422)
Q Consensus 180 ~~~--~~~~i~i~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK 255 (422)
+++ +..++++++| ++++|.++ +.+++++|.++|++||+++|+||+|+++ +.|.. ..+..++...+ +.|+||
T Consensus 197 l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~~-~~~~~~~~~~d---i~s~sK 271 (434)
T 2epj_A 197 FAEYGDRIAGVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVTGF-RLGLE-GAQGYFNIEGD---IIVLGK 271 (434)
T ss_dssp HHHHGGGEEEEEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTTTT-TSSTT-HHHHHHTCCCS---EEEEEG
T ss_pred HHhCCCCEEEEEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchhce-eCCcc-hhhHHhCCCCC---eeeecc
Confidence 763 2445666777 56799865 7999999999999999999999999976 33321 11122222222 348899
Q ss_pred ccCCCCceeEEEEeeCCCCcccchhHHHHHHhh----hhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHH
Q 014603 256 RWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSF----LNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCD 331 (422)
Q Consensus 256 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 331 (422)
.+++ |+|+||++++ +++++.+... ...+.+.++++++++.++|+...+ ++..++++++.+++++
T Consensus 272 ~l~~-G~~~G~v~~~--------~~~~~~l~~~~~~~~~~t~~~~~~~~aa~~a~l~~~~~---~~~~~~~~~~~~~l~~ 339 (434)
T 2epj_A 272 IIGG-GFPVGAVAGS--------REVMSLLTPQGKVFNAGTFNAHPITMAAGLATLKALEE---EPVYSVSREAAKALEE 339 (434)
T ss_dssp GGGT-TSSCEEEEEC--------HHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHHH---SCHHHHHHHHHHHHHH
T ss_pred hhcC-Ccceeeeeec--------HHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHH
Confidence 9876 9999999986 4566665541 122346788889888888875322 3455667777777777
Q ss_pred HhhcCC---CCCCCCCCCCceEEEEecCcccccC--------CCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEeccC
Q 014603 332 RLKEIP---CITCPKKPEGSMFVMVKLNYSLLEG--------INSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAVE 400 (422)
Q Consensus 332 ~L~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~--------~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~ 400 (422)
.|+++. ++. ...+..|.++|+.++...... .....++...+ .++||.+.|+.. ..+|+++.++
T Consensus 340 ~L~~~~~~~~~~-~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~~~----~~~~~~~~~t 413 (434)
T 2epj_A 340 AASEVLDRTGLP-YTINRVESMMQLFIGVEEVSNAAQARKADKKFYVKLHEEM-LRRGVFIAPSNL----EAVFTGLPHQ 413 (434)
T ss_dssp HHHHHHHHHTCC-EEEEEETTEEEEEETCSCCSSHHHHTTSCHHHHHHHHHHH-HHTTEECCSSTT----SCEECCTTCS
T ss_pred HHHHHHhhCCCc-EEEEEeeeEEEEEEeCCCcccchhccccCHHHHHHHHHHH-HHCCeEEeccCC----CcEEEeccCC
Confidence 776541 232 112345678888886410000 00134555655 467999999752 3577776789
Q ss_pred hHHHHHHHHHHHHHHHHh
Q 014603 401 PSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 401 ~~~l~~~~~~l~~~~~~~ 418 (422)
++++++++++|+++++++
T Consensus 414 ~e~i~~~l~~l~~~l~~~ 431 (434)
T 2epj_A 414 GEALEIAVEGLRSSLKTV 431 (434)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999998775
No 170
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.97 E-value=7.5e-29 Score=237.37 Aligned_cols=337 Identities=14% Similarity=0.094 Sum_probs=220.7
Q ss_pred CceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCC------CCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCH
Q 014603 46 PLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYS------STVGILPARRAIADYLNRDLPYKLSPDDVYLTLGC 119 (422)
Q Consensus 46 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~------~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~ 119 (422)
+.|+|..+. + +.+|.+.+++.+++.+.....|+ ......++++.+.+.+.+.+ ++++++|++++|
T Consensus 26 ~~i~l~~~~-----~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~--g~~~~~i~~~sG- 96 (417)
T 3n0l_A 26 EGLEMIASE-----N-FTLPEVMEVMGSILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKKLF--NCKFANVQPNSG- 96 (417)
T ss_dssp HSEECCTTC-----C-CCCHHHHHHHTBGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHH--TCSEEECCCSSH-
T ss_pred cCeeeeccc-----C-CCCHHHHHHHhhhhhccccccCCCccccccchHHHHHHHHHHHHHHHHh--CCCCcceEeccH-
Confidence 457775554 1 34789999999887543222332 22233455553333333332 345566777666
Q ss_pred HHHHHHHHHHhcCCCCEEEecCCCccchHH---HHhhCCC--eEEEeeccCCCCcccCHHHHHHhhc-CCceEEEEeCCC
Q 014603 120 TQAIEVILTVLARPGANILLPRPGFPYYEA---RATHSHL--EVRHFDLLPAKGWEVDLDAVEALAD-ENTVALVIINPG 193 (422)
Q Consensus 120 ~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~---~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~i~i~~p~ 193 (422)
++++..++.+++++||+|+++.|+|+++.. .....|. .++.++.+ +++.+|++.|++.++ ++++++++++|+
T Consensus 97 t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~d~~~l~~~i~~~~~~~v~~~~~~ 174 (417)
T 3n0l_A 97 SQANQGVYAALINPGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVE--LDGRIDYEKVREIAKKEKPKLIVCGASA 174 (417)
T ss_dssp HHHHHHHHHHHSCTTCEEEEECC----------------CCSEEEEECCC--TTSSCCHHHHHHHHHHHCCSEEEECCSS
T ss_pred HHHHHHHHHHhcCCCCEEEecccccccccchhhhhhhhcceeeeEeccCC--CCCCcCHHHHHHHHHhcCCeEEEECCcc
Confidence 899999999999999999999999977544 3333333 34444443 556789999999887 578888888877
Q ss_pred CCcccccCHHHHHHHHHHHHHcCcEEEEccccc-ccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCC
Q 014603 194 NPCGNVYTYQHLQKIAETAKKLGIMVIADEVYD-HLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDP 272 (422)
Q Consensus 194 nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~-~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~ 272 (422)
| |..++ +++|.++|++||+++|+|++|. +..+.+.....+. ...+++.|+||++ +|+|.||+++++
T Consensus 175 ~--G~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~-----~~di~~~s~sK~l--~g~~~G~~~~~~- 241 (417)
T 3n0l_A 175 Y--ARVID---FAKFREIADEIGAYLFADIAHIAGLVVAGEHPSPFP-----YAHVVSSTTHKTL--RGPRGGIIMTND- 241 (417)
T ss_dssp C--CSCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCCTT-----TCSEEEEESSTTT--CSCSCEEEEESC-
T ss_pred c--CccCC---HHHHHHHHHHcCCEEEEECccchhhhhcccCCCccc-----cceEEEeeCcccc--CCCCeeEEEECC-
Confidence 6 77765 7889999999999999999964 3333333222222 1238899999985 778889999863
Q ss_pred CCcccchhHHHHHHhhhhh--ccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceE
Q 014603 273 NGILQDSGIVDSIKSFLNI--SSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMF 350 (422)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~ 350 (422)
+++.+.+...... .++++...+.++..++....+..+++..+++.++++.+.+.|++. ++.+...+..+.+
T Consensus 242 ------~~~~~~~~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~ 314 (417)
T 3n0l_A 242 ------EELAKKINSAIFPGIQGGPLMHVIAAKAVGFKFNLSDEWKVYAKQVRTNAQVLANVLMDR-KFKLVSDGTDNHL 314 (417)
T ss_dssp ------HHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSE
T ss_pred ------HHHHHHHhhhhCCcccCCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC-CceeccCCCCceE
Confidence 4677777665432 234455555565555554233556788888999999999999984 6663322344667
Q ss_pred EEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCC------CCeEEEEec------cChHHHHHHHHHHHHHHHHh
Q 014603 351 VMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGL------KDWLRITFA------VEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~------~~~iRis~~------~~~~~l~~~~~~l~~~~~~~ 418 (422)
+|+.++... .+..++ ..+++++||.+.++..+.. .+.+|+++. .+++++++++++|++++++.
T Consensus 315 ~~~~~~~~~----~~~~~~-~~~l~~~gi~v~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~i~~~~~~l~~~l~~~ 389 (417)
T 3n0l_A 315 VLMSFLDRE----FSGKDA-DLALGNAGITANKNTVPGEIRSPFITSGLRLGTPALTARGFKEKEMEIVSNYIADILDDV 389 (417)
T ss_dssp EEEECTTSS----SCHHHH-HHHHHHTTEECEECCCTTCCSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHTT
T ss_pred EEEEcccCC----CCHHHH-HHHHHHcCeEEeccccCCCCcccCCCCeeEecCHHHhhCCCCHHHHHHHHHHHHHHHhcc
Confidence 888775321 134444 4455778999987653321 367999985 35799999999999998754
No 171
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.97 E-value=3e-29 Score=240.89 Aligned_cols=342 Identities=15% Similarity=0.089 Sum_probs=215.5
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 122 (422)
+|+.++||..|.+....+ +.+|.+.+++.+++.......| ..+.+..+++++.+.++ ++++|++++|+++|
T Consensus 50 ~g~~~lD~~~~~~~~~lG-~~~p~v~~a~~~~~~~~~~~~~-----~~~~~~~la~~l~~~~~---~~~~v~~~~ggsea 120 (427)
T 3fq8_A 50 DGNRYIDYVGTWGPAICG-HAHPEVIEALKVAMEKGTSFGA-----PCALENVLAEMVNDAVP---SIEMVRFVNSGTEA 120 (427)
T ss_dssp TSCEEEESSGGGTTCTTC-BTCHHHHHHHHHHHTTCSCCSS-----CCHHHHHHHHHHHHHST---TCSEEEEESSHHHH
T ss_pred CCCEEEECCCchhhhccC-CCCHHHHHHHHHHHHhCCCcCC-----CCHHHHHHHHHHHHhCC---CCCEEEEeCCHHHH
Confidence 578899999987553222 3689999999999876433223 23555566666655443 57899999999999
Q ss_pred HHHHHHHhc--CCCCEEEecCCCccchHHHHhhC-CCeEEEeeccCCCCcc------------cCHHHHHHhhcC--Cce
Q 014603 123 IEVILTVLA--RPGANILLPRPGFPYYEARATHS-HLEVRHFDLLPAKGWE------------VDLDAVEALADE--NTV 185 (422)
Q Consensus 123 ~~~~~~~l~--~~gd~Vl~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~------------~d~~~l~~~~~~--~~~ 185 (422)
++.+++... ..+++|++.+++|+++...+... +.....++.....+.. -|++.|++.+++ +..
T Consensus 121 ~~~al~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~ 200 (427)
T 3fq8_A 121 CMAVLRIMRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTPYNDLEAVKALFAENPGEI 200 (427)
T ss_dssp HHHHHHHHHHHHCCCEEEEEETCCCCSCGGGCSSCCTHHHHHTCCSCSSSCHHHHTTEEEEETTCHHHHHHHHHHSTTTE
T ss_pred HHHHHHHHHHhhCCCEEEEECCCcCCCCHHHHHhcCCcccccCCCCCCCCCCcccCceeecCCCCHHHHHHHHHhCCCCE
Confidence 999995432 23478999999998765433322 1111101000000100 188999988865 234
Q ss_pred EEEEeCC-CCCcccccC-HHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCce
Q 014603 186 ALVIINP-GNPCGNVYT-YQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWR 263 (422)
Q Consensus 186 ~i~i~~p-~nptG~~~~-~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r 263 (422)
++++++| +|++|.+.+ .+++++|.++|++||++||+||+|+++ +.|... .....+...+ +.|+||.++ +|+|
T Consensus 201 ~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~~-~~~~~~~~~d---i~t~sK~~~-~G~~ 274 (427)
T 3fq8_A 201 AGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGF-RIAYGG-VQEKFGVTPD---LTTLGKIIG-GGLP 274 (427)
T ss_dssp EEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBT-TTBTTH-HHHHTTCCCS---EEEECGGGG-TTSS
T ss_pred EEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcch-hhHhcCCCCC---hhhhhhhhh-CCcc
Confidence 4555555 667776654 666999999999999999999999977 554321 1122222222 457889987 7999
Q ss_pred eEEEEeeCCCCcccchhHHHHHHhh----hhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhh----c
Q 014603 264 LGWLVTSDPNGILQDSGIVDSIKSF----LNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLK----E 335 (422)
Q Consensus 264 ~G~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~----~ 335 (422)
+||++++ +++++.+... ...+.++++++++++.++|+...+ ++..++++++.+.+++.|+ +
T Consensus 275 ~G~~~~~--------~~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~ 343 (427)
T 3fq8_A 275 VGAYGGK--------REIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLELLRQ---PGTYEYLDQITKRLSDGLLAIAQE 343 (427)
T ss_dssp CEEEEEC--------HHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTS---TTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEc--------HHHHHhhccCCCccccCCCCcCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999885 4677666542 122346688999999888875321 2233444444444444444 3
Q ss_pred CCCCCCCCCCCCceEEEEecCccccc--------CCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEeccChHHHHHH
Q 014603 336 IPCITCPKKPEGSMFVMVKLNYSLLE--------GINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALEDG 407 (422)
Q Consensus 336 ~~~~~~~~~~~~g~~~~~~~~~~~~~--------~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~l~~~ 407 (422)
++ +. ...+..|.++++.++..... ......++...+ .++||.+.|+.. ..+|+++.+++++++++
T Consensus 344 ~~-~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~Gi~v~~~~~----~r~~~~~~~t~e~i~~~ 416 (427)
T 3fq8_A 344 TG-HA-ACGGQVSGMFGFFFTEGPVHNYEDAKKSDLQKFSRFHRGM-LEQGIYLAPSQF----EAGFTSLAHTEEDIDAT 416 (427)
T ss_dssp TT-CC-CEEEEETTEEEEESSSCCCCSHHHHTTSCHHHHHHHHHHH-HHTTEECCSSTT----SCEECCTTCCHHHHHHH
T ss_pred CC-CC-eEEEEeeeEEEEEEecCccccccccccccHHHHHHHHHHH-HHCCcEEecCCC----CCEEeeCcCCHHHHHHH
Confidence 32 22 11234577888887542100 000023455555 556999998753 34566656899999999
Q ss_pred HHHHHHHHHH
Q 014603 408 LGRMKAFYDR 417 (422)
Q Consensus 408 ~~~l~~~~~~ 417 (422)
+++|++++++
T Consensus 417 l~~l~~~l~~ 426 (427)
T 3fq8_A 417 LAAARTVMSA 426 (427)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999999875
No 172
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.97 E-value=5.1e-28 Score=233.80 Aligned_cols=336 Identities=15% Similarity=0.030 Sum_probs=232.2
Q ss_pred CCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCC---CCEEEecCHHHHHHHHHHHhcC------
Q 014603 62 RTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSP---DDVYLTLGCTQAIEVILTVLAR------ 132 (422)
Q Consensus 62 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~---~~i~~~~g~~~a~~~~~~~l~~------ 132 (422)
+.++.+.+++.+.+.... ..|....+..++++.+.+++.+.+|.+.+. ..+++|+|+|+|+..++.++..
T Consensus 53 ~~~~~v~e~~~~a~~~~~-~~~~~~~~~~~l~~~~~~~la~l~g~~~~~~~~~~~~~t~ggtea~~~al~a~~~~~~~~~ 131 (452)
T 2dgk_A 53 WDDENVHKLMDLSINKNW-IDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRM 131 (452)
T ss_dssp CCCHHHHHHHHHTTTCBT-TCTTTCHHHHHHHHHHHHHHHHHTTCCCCTTSCCEEEEESSHHHHHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHhccCC-CChhhChhHHHHHHHHHHHHHHHhCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHH
Confidence 455789999988876532 345555567788888888887777644321 2489999999999999887753
Q ss_pred --CC-----CEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHH
Q 014603 133 --PG-----ANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHL 205 (422)
Q Consensus 133 --~g-----d~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l 205 (422)
+| ++|++++ +|..+...+...|++++.++.++ +++.+|++.|++.++++++++++++|+||||.+ +++
T Consensus 132 ~~~G~~~~~~~vi~~~-~h~~~~~~~~~~G~~v~~v~~~~-~~~~~d~~~l~~~i~~~t~~v~~~~~~n~tG~~---~~l 206 (452)
T 2dgk_A 132 EAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPMRP-GQLFMDPKRMIEACDENTIGVVPTFGVTYTGNY---EFP 206 (452)
T ss_dssp HHTTCCCSCCEEEESS-CCHHHHHHHHHTTCEEEECCCBT-TBCSCCHHHHHHHCCTTEEEEECBBSCTTTCBB---CCH
T ss_pred HhcCCCCCCcEEEECC-CcHHHHHHHHHcCceEEEEecCC-CCCeECHHHHHHHHhhCCEEEEEEcCCcCCccc---CCH
Confidence 45 5999999 99999999999999999998864 357899999999999899999999999999999 568
Q ss_pred HHHHHHHHHc------CcEEEEccccccccc---CCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcc
Q 014603 206 QKIAETAKKL------GIMVIADEVYDHLAF---GNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGIL 276 (422)
Q Consensus 206 ~~i~~~~~~~------~~~li~D~~~~~~~~---~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~ 276 (422)
++|.++|+++ |+++++|++|+.+.. .+.....+. .. .-.+++.|++|+ ++.|+++|+++++++..
T Consensus 207 ~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~--~~d~~~~~~hK~-~~~~~~~G~~~~~~~~~-- 280 (452)
T 2dgk_A 207 QPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFR-LP--RVKSISASGHKF-GLAPLGCGWVIWRDEEA-- 280 (452)
T ss_dssp HHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTT-ST--TEEEEEEETTTT-TCCCSSCEEEEESSGGG--
T ss_pred HHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhhCccchhhcC-CC--CCcEEEECcccc-cCCCCCeEEEEEcCHHH--
Confidence 8888888895 999999999987542 222111111 11 112567788996 77889999999965321
Q ss_pred cchhHHHHHHh---hhh-------hccCc---chHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCC
Q 014603 277 QDSGIVDSIKS---FLN-------ISSDP---ATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPK 343 (422)
Q Consensus 277 ~~~~~~~~~~~---~~~-------~~~~~---~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 343 (422)
+.+.+.. +.. ..++. ..+.++++...+ ....+++..++..++++++.+.|++++++.++
T Consensus 281 ----~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~aal~~l---g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~- 352 (452)
T 2dgk_A 281 ----LPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRL---GREGYTKVQNASYQVAAYLADEIAKLGPYEFI- 352 (452)
T ss_dssp ----SCGGGCEEECCTTCCEEECCSCCSCBCHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHTTSSEEEE-
T ss_pred ----HHHHhccCccccCCCCCCcccCCCChhHHHHHHHHHHHHH---hHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEe-
Confidence 1121110 000 01111 223344443333 34668888999999999999999999777743
Q ss_pred CC----CCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCC---CCCCCeEEEEec--cChHHHHHHHHHHHHH
Q 014603 344 KP----EGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGIT---VGLKDWLRITFA--VEPSALEDGLGRMKAF 414 (422)
Q Consensus 344 ~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~---~~~~~~iRis~~--~~~~~l~~~~~~l~~~ 414 (422)
.| ....++.++++...... .+..++...| .++||.+..... ....+++|++++ +++++++++++.|+++
T Consensus 353 ~~~~~~~~~~~v~f~~~~~~~~~-~~~~~l~~~L-~~~Gi~v~~~~~~~~~~~~~~lRis~~~~~t~e~id~li~~l~~~ 430 (452)
T 2dgk_A 353 CTGRPDEGIPAVCFKLKDGEDPG-YTLYDLSERL-RLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKAS 430 (452)
T ss_dssp EECCTTTBSSEEEEEECTTCCCS-CCHHHHHHHH-HHTTCBCCEEECSTTCTTCEEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred cCCCCCCCeEEEEEEecCccccc-CCHHHHHHHH-HhcCCeeeeeeCCcccCCeEEEEEEecCCCCHHHHHHHHHHHHHH
Confidence 33 23445556665310000 1336676766 456986543211 112458999998 5789999999999998
Q ss_pred HHHhc
Q 014603 415 YDRHA 419 (422)
Q Consensus 415 ~~~~~ 419 (422)
++++.
T Consensus 431 ~~~~~ 435 (452)
T 2dgk_A 431 LKYLS 435 (452)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87654
No 173
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.97 E-value=9e-29 Score=240.17 Aligned_cols=332 Identities=17% Similarity=0.151 Sum_probs=235.8
Q ss_pred CceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCC---CCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHH
Q 014603 46 PLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSS---TVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (422)
Q Consensus 46 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~---~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 122 (422)
.++.|+ +.+. +..|.+.+++.+... ..+.|.+ ..|..++++.+++++.+.+|.. . .+++++|++++
T Consensus 67 ~~~~lg-~~~~-----~~~p~v~~~~~~~~~--~~~~~~~~~~~~g~~~l~~~l~~~la~~~g~~--~-~~~~~~ggt~a 135 (474)
T 1wyu_B 67 TFYPLG-SCTM-----KYNPKLHEEAARLFA--DLHPYQDPRTAQGALRLMWELGEYLKALTGMD--A-ITLEPAAGAHG 135 (474)
T ss_dssp SCCCBT-TTCC-----CCCCHHHHHHHHTTS--SCCTTSCGGGCHHHHHHHHHHHHHHHHHHTCS--E-EECCCSSHHHH
T ss_pred Cccccc-cccc-----cCCHHHHHHHHHHHH--hcCCCCchhhChHHHHHHHHHHHHHHHHHCCC--c-eeecChHHHHH
Confidence 467777 4322 334567777766532 2334543 3455677777777777655533 2 46688999999
Q ss_pred HHHHHHHh----cCCCC-----EEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCC
Q 014603 123 IEVILTVL----ARPGA-----NILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPG 193 (422)
Q Consensus 123 ~~~~~~~l----~~~gd-----~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~ 193 (422)
+..++.++ .++|| +|+++.++|..+...+...|.+++.++.+. ++.+|++.|++.++++++++++++|
T Consensus 136 ~~~al~~~~~~~~~~Gd~~~r~~Vlv~~~~h~~~~~~~~~~G~~vv~v~~~~--~~~~d~~~L~~~i~~~t~~v~~~~p- 212 (474)
T 1wyu_B 136 ELTGILIIRAYHEDRGEGRTRRVVLVPDSAHGSNPATASMAGYQVREIPSGP--EGEVDLEALKRELGPHVAALMLTNP- 212 (474)
T ss_dssp HHHHHHHHHHHHHHTTCTTTCCEEEEETTSCTHHHHHHHHTTCEEEEECBCT--TSSBCHHHHHHHCSTTEEEEEECSS-
T ss_pred HHHHHHHHHHHHHhcCCccCCCEEEEeCCcChhhHHHHHHCCCEEEEecCCC--CCCcCHHHHHHhhCCCceEEEEECC-
Confidence 99865554 35777 999999999999999999999999998753 4678999999999888999999998
Q ss_pred CCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCC-C---ceeEEEEe
Q 014603 194 NPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVP-G---WRLGWLVT 269 (422)
Q Consensus 194 nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~-G---~r~G~~~~ 269 (422)
||+|.+. +++++|+++|+++|+++|+|++|....++ ......++. .+++.|+||+|+.| | +|+||+++
T Consensus 213 n~~G~~~--~~l~~i~~l~~~~g~~li~Dea~~~~~~g---~~~~~~~g~---di~~~s~~K~~~~p~g~gG~~~G~~~~ 284 (474)
T 1wyu_B 213 NTLGLFE--RRILEISRLCKEAGVQLYYDGANLNAIMG---WARPGDMGF---DVVHLNLHKTFTVPHGGGGPGSGPVGV 284 (474)
T ss_dssp CTTSCCC--TTHHHHHHHHHHHTCEEEEEGGGGGGTTT---TCCHHHHTC---SEEECCTTTTTCCCCTTSCCCCCCEEE
T ss_pred CCCcccC--CCHHHHHHHHHHcCCEEEEeCchhhhhcc---CCCcccCCC---cEEEEeCccccccCCCCCCCCeEEEEE
Confidence 6899873 47899999999999999999999765432 112223333 38888999998766 4 69999999
Q ss_pred eCCCCcccchhHHHHHHh-h-------------------hhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHH
Q 014603 270 SDPNGILQDSGIVDSIKS-F-------------------LNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADIC 329 (422)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~-~-------------------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l 329 (422)
++ ++++.+.. . ....++.+.+.+.++..++.....+++++..+++.++++++
T Consensus 285 ~~--------~l~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~g~~~l~~~~~~~~~~~~~l 356 (474)
T 1wyu_B 285 KA--------HLAPYLPVPLVERGEEGFYLDFDRPKSIGRVRSFYGNFLALVRAWAYIRTLGLEGLKKAAALAVLNARYL 356 (474)
T ss_dssp CG--------GGGGGCCSCEEEECSSCEEEECCCTTCCCCSSSTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cH--------HHHHhCCCCeeeccCCeeEecccCcccCcccccCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 74 34443331 0 00112456677777777776544567888899999999999
Q ss_pred HHHhhcCCCCCCCCCCCCceE--EEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCC--CCCeEEEEec--cChHH
Q 014603 330 CDRLKEIPCITCPKKPEGSMF--VMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVG--LKDWLRITFA--VEPSA 403 (422)
Q Consensus 330 ~~~L~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~--~~~~iRis~~--~~~~~ 403 (422)
.+.|+++ ++.+. .+. +.+ +++.++.. .+..++..++++ +||.+ ++..|. ..+++||+++ +++++
T Consensus 357 ~~~L~~~-g~~~~-~~~-~~~~~~~~~~~~~-----~~~~~l~~~L~~-~Gi~~-~~~~~~~~~~~~lRis~~~~~t~e~ 426 (474)
T 1wyu_B 357 KELLKEK-GYRVP-YDG-PSMHEFVAQPPEG-----FRALDLAKGLLE-LGFHP-PTVYFPLIVKEALMVEPTETEAKET 426 (474)
T ss_dssp HHHHHHT-TCBCS-SCS-SCCSCEEEBCSTT-----CCHHHHHHHHHH-TTCCC-CEESCSTTSTTCEEECCCTTSCHHH
T ss_pred HHHHhhc-CcEec-CCC-CcceEEEEEcCCC-----CCHHHHHHHHHH-CCccc-cccccccccCCEEEEEeecCCCHHH
Confidence 9999987 77632 222 222 45555211 256777777755 59985 554443 3689999998 48999
Q ss_pred HHHHHHHHHHHHHH
Q 014603 404 LEDGLGRMKAFYDR 417 (422)
Q Consensus 404 l~~~~~~l~~~~~~ 417 (422)
+++++++|++++++
T Consensus 427 id~~~~~L~~~~~~ 440 (474)
T 1wyu_B 427 LEAFAEAMGALLKK 440 (474)
T ss_dssp HHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999988753
No 174
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.97 E-value=1.7e-29 Score=242.25 Aligned_cols=333 Identities=15% Similarity=0.087 Sum_probs=222.2
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 122 (422)
+|..+|||..|.+....++ .+|.+.+++.+++.......| ..++++.+++.+.+.++ .+++|++++|+++|
T Consensus 50 ~g~~~iD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~~-----~~~~~~~l~~~l~~~~~---~~~~v~~~~~g~ea 120 (424)
T 2e7u_A 50 DGNRYLDYVMSWGPLILGH-AHPKVLARVRETLERGLTFGA-----PSPLEVALAKKVKRAYP---FVDLVRFVNSGTEA 120 (424)
T ss_dssp TCCEEEESSGGGTTCTTCB-TCHHHHHHHHHHHHTCSCCSS-----CCHHHHHHHHHHHHHCT---TCCEEEEESSHHHH
T ss_pred CCCEEEEccccccccccCC-CCHHHHHHHHHHHHhCCCCCC-----CCHHHHHHHHHHHHhCC---CCCEEEEeCCHHHH
Confidence 5778999998865433333 689999999999976422222 23455555555555443 56899999999999
Q ss_pred HHHHHHH---hcCCCCEEEecCCCccchHHHHhh--------------CCC------eEEEeeccCCCCcccCHHHHHHh
Q 014603 123 IEVILTV---LARPGANILLPRPGFPYYEARATH--------------SHL------EVRHFDLLPAKGWEVDLDAVEAL 179 (422)
Q Consensus 123 ~~~~~~~---l~~~gd~Vl~~~~~~~~~~~~~~~--------------~g~------~~~~~~~~~~~~~~~d~~~l~~~ 179 (422)
+..+++. +.+ ++.|++.+|+|+++...+.. .|. .++.++. .|++.|++.
T Consensus 121 ~~~al~~ar~~~~-~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-------~d~~~le~~ 192 (424)
T 2e7u_A 121 TMSALRLARGYTG-RPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVLEY-------NDPEGLREV 192 (424)
T ss_dssp HHHHHHHHHHHHC-CCEEEEETTCCCCCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEEEECT-------TCHHHHHHH
T ss_pred HHHHHHHHHHhhC-CCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCCCCCCccCCceEeCCC-------CCHHHHHHH
Confidence 9999986 554 48899999999986543321 121 1222221 378899888
Q ss_pred hcC--CceEEEEeCCCCC-ccccc-CHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCcc
Q 014603 180 ADE--NTVALVIINPGNP-CGNVY-TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISK 255 (422)
Q Consensus 180 ~~~--~~~~i~i~~p~np-tG~~~-~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK 255 (422)
+++ +..++++++|+|+ +|.++ +.+++++|.++ ++||+++|+||+|+++ +.|.. .....++...+ +.|+||
T Consensus 193 l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~g~-~~g~~-~~~~~~~~~~d---i~s~sK 266 (424)
T 2e7u_A 193 LKRRGEEIAAIIFEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMTGF-RLAFG-GATELLGLKPD---LVTLGK 266 (424)
T ss_dssp HHHHGGGEEEEEECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTTTT-TSSTT-HHHHHHTCCCS---EEEECG
T ss_pred HHhCCCCEEEEEEeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCcccc-ccchh-HHHHHhCCCcc---hhhhhh
Confidence 763 3456777888654 89764 78999999999 9999999999999976 43421 11222222222 338899
Q ss_pred ccCCCCceeEEEEeeCCCCcccchhHHHHHHhh----hhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHH
Q 014603 256 RWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSF----LNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCD 331 (422)
Q Consensus 256 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 331 (422)
+++ +|+|+||++++ +++++.+... ...+.+.++++++++.++|+...+ .++..++++++.+++++
T Consensus 267 ~l~-~G~~~G~~~~~--------~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~~l~~ 335 (424)
T 2e7u_A 267 ILG-GGLPAAAYAGR--------REIMEKVAPLGPVYQAGTLSGNPLAMAAGLATLELLEE--NPGYYAYLEDLGARLEA 335 (424)
T ss_dssp GGG-TTSSCEEEEEC--------HHHHTTBTTTSSBCCCCTTCSCHHHHHHHHHHHHHHHH--CTHHHHHHHHHHHHHHH
T ss_pred hhh-CCcceEEEEEc--------HHHHhhhcccCCcccCCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHH
Confidence 987 59999999986 4666666542 112346778889998888875322 24466677777777777
Q ss_pred HhhcC---CCCCCCCCCCCceEEEEecCccccc--------CCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEeccC
Q 014603 332 RLKEI---PCITCPKKPEGSMFVMVKLNYSLLE--------GINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAVE 400 (422)
Q Consensus 332 ~L~~~---~~~~~~~~~~~g~~~~~~~~~~~~~--------~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~ 400 (422)
.|+++ .++. ...+..|.++|+.++..... ......++...++ ++||.+.|+.. ..+|+++.++
T Consensus 336 ~L~~~~~~~~~~-~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~----~~~~~~~~~t 409 (424)
T 2e7u_A 336 GLKEVLKEKGLP-HTVNRVGSMITVFFTEGPVVTFQDARRTDTELFKRFFHGLL-DRGIYWPPSNF----EAAFLSVAHR 409 (424)
T ss_dssp HHHHHHHHTTCC-CEEEEETTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHH-TTTEECCSSSS----SCEECCTTCC
T ss_pred HHHHHHHhCCCc-eEEEeeceEEEEEEeCCCCcchhhhcccCHHHHHHHHHHHH-HCCeEEeccCC----CceEeeccCC
Confidence 77653 1232 11244567889888631000 0001345555554 67999999752 3477776789
Q ss_pred hHHHHHHHHHHHHHH
Q 014603 401 PSALEDGLGRMKAFY 415 (422)
Q Consensus 401 ~~~l~~~~~~l~~~~ 415 (422)
++++++++++|++++
T Consensus 410 ~~~i~~~l~~l~~~l 424 (424)
T 2e7u_A 410 EEDVEKTLEALRKAL 424 (424)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhC
Confidence 999999999998763
No 175
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.97 E-value=2.4e-29 Score=241.65 Aligned_cols=345 Identities=13% Similarity=0.056 Sum_probs=214.3
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 122 (422)
+|+.++||..+......+ ..+|++.+++.+++.+.....|+ .....++++++++++ + .++++++++||++|
T Consensus 51 ~g~~ylD~~~~~~~~~lG-~~~p~v~~A~~~~~~~~~~~~~~-~~~~~~la~~l~~~~----~---~~~~v~~~~sGsea 121 (429)
T 4e77_A 51 DGKAYIDYVGSWGPMILG-HNHPAIRQAVIEAVERGLSFGAP-TEMEVKMAQLVTDLV----P---TMDMVRMVNSGTEA 121 (429)
T ss_dssp TCCEEEESSGGGTTCTTC-BTCHHHHHHHHHHHTTCSCCSSC-CHHHHHHHHHHHHHS----T---TCSEEEEESSHHHH
T ss_pred CCCEEEECCCchhccccC-CCCHHHHHHHHHHHHhCcccCCC-CHHHHHHHHHHHhhC----C---CCCEEEEeCcHHHH
Confidence 588899999887542222 35899999999998764333343 233445555555554 2 57899999999999
Q ss_pred HHHHHHHhc--CCCCEEEecCCCccchHHHHhh-CCCeEE--EeeccCC------CC----cccCHHHHHHhhcC--Cce
Q 014603 123 IEVILTVLA--RPGANILLPRPGFPYYEARATH-SHLEVR--HFDLLPA------KG----WEVDLDAVEALADE--NTV 185 (422)
Q Consensus 123 ~~~~~~~l~--~~gd~Vl~~~~~~~~~~~~~~~-~g~~~~--~~~~~~~------~~----~~~d~~~l~~~~~~--~~~ 185 (422)
++.+++... ..++.|++.+++|+++...+.. .+.... ..+.... .. ...|++.|++.+++ ...
T Consensus 122 ~~~al~~a~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~ 201 (429)
T 4e77_A 122 TMSAIRLARGYTGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGVPTDFAKHTLTCTYNDLASVRQAFEQYPQEV 201 (429)
T ss_dssp HHHHHHHHHHHHCCCEEEEETTCCCC------------------CCCTTSCGGGGTTEEEECTTCHHHHHHHHHHSTTTE
T ss_pred HHHHHHHHHHhhCCCEEEEEcCccCCCChhhhhhcCCcccccCCCCcCCCCCccCCceeecCCCCHHHHHHHHHhcCCCE
Confidence 999998543 2557999999999887542221 111100 0010000 00 00178899988763 345
Q ss_pred EEEEeCCCCCcc-cc-cCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCce
Q 014603 186 ALVIINPGNPCG-NV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWR 263 (422)
Q Consensus 186 ~i~i~~p~nptG-~~-~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r 263 (422)
++++++|+|++| .+ .+.+.+++|.++|++||+++|+||+|.++ +.|.. .....++..++ +.|+||.++ +|+|
T Consensus 202 ~~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~-r~g~~-~~~~~~~~~pd---i~t~sK~~~-~G~~ 275 (429)
T 4e77_A 202 ACIIVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMTGF-RVALA-GAQDYYHVIPD---LTCLGKIIG-GGMP 275 (429)
T ss_dssp EEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBT-TTBTT-CHHHHTTCCCS---EEEEEGGGG-TTSC
T ss_pred EEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCc-ccCcc-hHHHhcCCCCC---eeeeccccc-CCCC
Confidence 677788866554 43 34566999999999999999999999987 54432 12222332222 347899987 7999
Q ss_pred eEEEEeeCCCCcccchhHHHHHHhh----hhhccCcchHHHHHHHHHHhhch-HHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 014603 264 LGWLVTSDPNGILQDSGIVDSIKSF----LNISSDPATFIQGAVPQILEKTE-EEFFSKITDILRETADICCDRLKEIPC 338 (422)
Q Consensus 264 ~G~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~ 338 (422)
+||++++ +++++.+... ...+.+.++++++++.++|+... +...++..+.....++.+.+.+.+++
T Consensus 276 ~G~~~~~--------~~~~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~- 346 (429)
T 4e77_A 276 VGAFGGR--------REVMNALAPTGPVYQAGTLSGNPIAMAAGFACLTEISQVGVYETLTELTDSLATGLRHAAKEEN- 346 (429)
T ss_dssp CEEEEEC--------HHHHTTBTTTSSBCC--CCCCCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTT-
T ss_pred eEEEEEC--------HHHHHHhccCCCccccCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCC-
Confidence 9999985 4677666542 22344778899999998887532 23333333333333444444443443
Q ss_pred CCCCCCCCCceEEEEecCcccc---------cCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEeccChHHHHHHHH
Q 014603 339 ITCPKKPEGSMFVMVKLNYSLL---------EGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALEDGLG 409 (422)
Q Consensus 339 ~~~~~~~~~g~~~~~~~~~~~~---------~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~l~~~~~ 409 (422)
+. ...+..|.++++.++.... .......++...+ .++||.+.|+.. ..+|+++.+++++++++++
T Consensus 347 ~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gi~v~~~~~----~~~~~~~~~t~e~i~~~l~ 420 (429)
T 4e77_A 347 IP-LVVNHVGGMFGLFFTNADTVTCYQDVMNCDVERFKRFFHLM-LEEGVYLAPSAF----EAGFMSLAHSNEDIQKTVN 420 (429)
T ss_dssp CC-CEEEEETTEEEEECCSSSCCCSHHHHHTSCHHHHHHHHHHH-HHTTEECCSSTT----SCEECCTTCCHHHHHHHHH
T ss_pred Cc-eEEEEeeeEEEEEEccCcccccccccccccHHHHHHHHHHH-HHCCeEEeecCC----CCEEEeccCCHHHHHHHHH
Confidence 22 1134457788888864200 0000114555655 456999998752 3567776689999999999
Q ss_pred HHHHHHHH
Q 014603 410 RMKAFYDR 417 (422)
Q Consensus 410 ~l~~~~~~ 417 (422)
+|++++++
T Consensus 421 ~l~~~l~~ 428 (429)
T 4e77_A 421 AARRCFAK 428 (429)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHHh
Confidence 99998754
No 176
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.97 E-value=1.8e-29 Score=243.52 Aligned_cols=336 Identities=14% Similarity=0.123 Sum_probs=222.3
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHH-H-HHHH---HhhCCCC--CCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEE
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAV-D-AIVH---SVRSARF--NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYL 115 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~-~-a~~~---~~~~~~~--~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~ 115 (422)
+|..++||..+.+....++ .+|.+. + ++.+ ++..... ..|.. ....++++.+++++. ...+++|++
T Consensus 52 ~g~~ylD~~~~~~~~~lG~-~~p~v~~~~A~~~~~~~~~~~~~~~~~~~~-~~~~~la~~la~~~~-----~~~~~~v~~ 124 (449)
T 2cjg_A 52 TGRRYLDMFTFVASSALGM-NPPALVDDREFHAELMQAALNKPSNSDVYS-VAMARFVETFARVLG-----DPALPHLFF 124 (449)
T ss_dssp TCCEEEESSHHHHTCSSCB-SCHHHHTCHHHHHHHHHHHTCCCCTTTCCC-HHHHHHHHHHHHHHC-----CTTCCEEEE
T ss_pred CCcEEEEccCCccccCCCC-CCHHHHHHHHHHHHHHHHHhcCCCCcccCC-HHHHHHHHHHHHhcC-----CCCCCEEEE
Confidence 5677889877765422222 479999 8 9999 7765321 11221 223455666666652 246789999
Q ss_pred ecCHHHHHHHHHHHhc---C----------C-CCEEEecCCCccchHHHHhhC-C--------C-----eEEEeeccCCC
Q 014603 116 TLGCTQAIEVILTVLA---R----------P-GANILLPRPGFPYYEARATHS-H--------L-----EVRHFDLLPAK 167 (422)
Q Consensus 116 ~~g~~~a~~~~~~~l~---~----------~-gd~Vl~~~~~~~~~~~~~~~~-g--------~-----~~~~~~~~~~~ 167 (422)
++|+++|++.+++.+. . + ||+|++.+|+|+++...+... + . ++..++.+...
T Consensus 125 ~~~gseA~~~aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 204 (449)
T 2cjg_A 125 VEGGALAVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRIDAPYMRPG 204 (449)
T ss_dssp ESSHHHHHHHHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGGGTCCSCHHHHTTSCCCCCCEECCCCCCTT
T ss_pred eCchHHHHHHHHHHHHHHhcccccccccccCCCCEEEEECCCcCCcccchhhhcCCchhhcccCCCCCCCcEEEcCCCch
Confidence 9999999999987542 2 2 899999999998865433221 1 1 34444442200
Q ss_pred Cc--------ccCHHHHHHhhc---CCceEEEEeCC-CCCcc-cccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCC
Q 014603 168 GW--------EVDLDAVEALAD---ENTVALVIINP-GNPCG-NVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTP 234 (422)
Q Consensus 168 ~~--------~~d~~~l~~~~~---~~~~~i~i~~p-~nptG-~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~ 234 (422)
.. ..+++.|++.++ +++++ ++++| +||+| ..++.+++++|.++|++||+++|+||+|+++.+.|..
T Consensus 205 ~~~~~~~~~~~~~~~~le~~i~~~~~~~~~-vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~ 283 (449)
T 2cjg_A 205 LDEPAMAALEAEALRQARAAFETRPHDIAC-FVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGTA 283 (449)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHSTTTEEE-EEECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSS
T ss_pred hhccccchhhHHHHHHHHHHHHhcCCceEE-EEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccccCCCccCcc
Confidence 11 235566888774 44554 55666 68999 5889999999999999999999999999987776642
Q ss_pred CCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHH-----h-hhhhccCcchHHHHHHHHHHh
Q 014603 235 FVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIK-----S-FLNISSDPATFIQGAVPQILE 308 (422)
Q Consensus 235 ~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~a~~~~l~ 308 (422)
..+...+..+++ .|+||.+ |+||+++++ ++++.+. . ....+.+++++++.++.++|+
T Consensus 284 -~~~~~~~~~~di---~t~sK~l-----~iG~~~~~~--------~~~~~l~~~~~~~~~~~~t~~~n~~~~~aa~aal~ 346 (449)
T 2cjg_A 284 -WAYQQLDVAPDI---VAFGKKT-----QVCGVMAGR--------RVDEVADNVFAVPSRLNSTWGGNLTDMVRARRILE 346 (449)
T ss_dssp -STHHHHTCCCSE---EEECGGG-----SSEEEEECG--------GGGGSTTCTTTSTTSSCCSSSSCHHHHHHHHHHHH
T ss_pred -eeecccCCCceE---EEecCcc-----cEEEEEECH--------HHhhhhhhcccCCcccccCCCCCHHHHHHHHHHHH
Confidence 122222222232 3678986 689999863 4544311 1 122345678899999999887
Q ss_pred hchHHHHHHHHHHHHHHHHHHHHHhhc----CCC-CCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEec
Q 014603 309 KTEEEFFSKITDILRETADICCDRLKE----IPC-ITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLP 383 (422)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~ 383 (422)
...+ ++..++++++++++.+.|++ ++. +. . .+..|.++++.++... ...++...++ ++||.+.|
T Consensus 347 ~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~-~-~~~~g~~~~~~~~~~~-----~~~~~~~~l~-~~Gv~v~~ 415 (449)
T 2cjg_A 347 VIEA---EGLFERAVQHGKYLRARLDELAADFPAVVL-D-PRGRGLMCAFSLPTTA-----DRDELIRQLW-QRAVIVLP 415 (449)
T ss_dssp HHHH---HTHHHHHHHHHHHHHHHHHHHHHHSTTTSE-E-EEEETTEEEEECSSHH-----HHHHHHHHHH-HTTEECEE
T ss_pred HHHh---ccHHHHHHHHHHHHHHHHHHHHhhCCCcee-e-EeeccEEEEEEECChH-----HHHHHHHHHH-HCCeEEec
Confidence 5332 34556677777777777765 343 33 2 2234667777776321 2456667665 56999998
Q ss_pred CCCCCCCCeEEEEec--cChHHHHHHHHHHHHHHHHh
Q 014603 384 GITVGLKDWLRITFA--VEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 384 g~~~~~~~~iRis~~--~~~~~l~~~~~~l~~~~~~~ 418 (422)
+. .+++|++++ ++++++++++++|+++++++
T Consensus 416 ~g----~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~ 448 (449)
T 2cjg_A 416 AG----ADTVRFRPPLTVSTAEIDAAIAAVRSALPVV 448 (449)
T ss_dssp ET----TTEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence 73 589999775 78999999999999998764
No 177
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.97 E-value=1.6e-28 Score=233.54 Aligned_cols=286 Identities=15% Similarity=0.129 Sum_probs=202.0
Q ss_pred CCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHh----hCCCeEEEeec
Q 014603 88 GILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARAT----HSHLEVRHFDL 163 (422)
Q Consensus 88 g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~----~~g~~~~~~~~ 163 (422)
...+++++++++. ..+++++++||++|+..++.+++++||+|+++.|+|+++...+. ..|.+++.++.
T Consensus 82 ~~~~l~~~la~~~--------g~~~~~~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~ 153 (414)
T 3ndn_A 82 TVSVFEERLRLIE--------GAPAAFATASGMAAVFTSLGALLGAGDRLVAARSLFGSCFVVCSEILPRWGVQTVFVDG 153 (414)
T ss_dssp HHHHHHHHHHHHH--------TCSEEEEESSHHHHHHHHHHTTCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECT
T ss_pred HHHHHHHHHHHHH--------CCCcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCccchHHHHHHHHHHHcCcEEEEeCC
Confidence 3456777777766 23678999999999999999999999999999999998766654 48999888875
Q ss_pred cCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCC
Q 014603 164 LPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS 243 (422)
Q Consensus 164 ~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~ 243 (422)
+ |++.|+++++++++++++++|+||+|.+. ++++|+++|+++|+++|+|++|....+. .++ ..+.
T Consensus 154 ~-------d~~~l~~ai~~~t~~v~le~p~NptG~~~---~l~~i~~la~~~g~~livDe~~~~~~~~----~~~-~~g~ 218 (414)
T 3ndn_A 154 D-------DLSQWERALSVPTQAVFFETPSNPMQSLV---DIAAVTELAHAAGAKVVLDNVFATPLLQ----QGF-PLGV 218 (414)
T ss_dssp T-------CHHHHHHHTSSCCSEEEEESSCTTTCCCC---CHHHHHHHHHHTTCEEEEECTTTHHHHC----CCG-GGTC
T ss_pred C-------CHHHHHHhcCCCCeEEEEECCCCCCCccc---cHHHHHHHHHHcCCEEEEECCCcccccC----Cch-hcCC
Confidence 2 78999999998999999999999999995 4788999999999999999999743211 122 2222
Q ss_pred CCCeEEEecCccccCCCC-ceeEEEEeeCCCCcccchhHHH-HHHhhhh-hccCcchHHHHHHHHHHhhchHHHHHHHHH
Q 014603 244 IVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDSGIVD-SIKSFLN-ISSDPATFIQGAVPQILEKTEEEFFSKITD 320 (422)
Q Consensus 244 ~~~~i~i~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 320 (422)
.+++.|+||.++++| +++|++++++ +.+. .++.... .....++...+++...++. +..+.+
T Consensus 219 ---div~~S~sK~l~~~G~~~~G~vv~~~--------~~~~~~l~~~~~~~g~~~~~~~a~~~~~~l~~-----l~~r~~ 282 (414)
T 3ndn_A 219 ---DVVVYSGTKHIDGQGRVLGGAILGDR--------EYIDGPVQKLMRHTGPAMSAFNAWVLLKGLET-----LAIRVQ 282 (414)
T ss_dssp ---SEEEEETTTTTTCSSCCCCEEEEECH--------HHHTTHHHHHHHHHCCCCCHHHHHHHHHHGGG-----HHHHHH
T ss_pred ---CeEeccCCccccCCCCceEEEEEECH--------HHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHH-----HHHHHH
Confidence 388999999998888 8999999863 3443 4543332 3334555655555555543 555667
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCC----------------CceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecC
Q 014603 321 ILRETADICCDRLKEIPCITCPKKPE----------------GSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPG 384 (422)
Q Consensus 321 ~~~~~~~~l~~~L~~~~~~~~~~~~~----------------~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g 384 (422)
+..++++.+.+.|++.|.+..+..|. .|.++++.++............++..+ +..++.+..|
T Consensus 283 ~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~G~~l~~~l~~~~~~~~~~~~~~~~~l-~~~~~~~s~G 361 (414)
T 3ndn_A 283 HSNASAQRIAEFLNGHPSVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALDCPEDVAKQRAFEVLDKM-RLIDISNNLG 361 (414)
T ss_dssp HHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEECSCGGGHHHHHHHHHHHC-SSSEECSCCS
T ss_pred HHHHHHHHHHHHHhcCCCEeEEECCCCCCCcCHHHHHHhCCCCceEEEEEEcCCccccHHHHHHHHHhC-ccceEcCCCC
Confidence 77788889999999887754333332 466888888631000000233444433 4556667666
Q ss_pred CCCC-----------------------CCCeEEEEeccChHHHHHHHHHHHHHH
Q 014603 385 ITVG-----------------------LKDWLRITFAVEPSALEDGLGRMKAFY 415 (422)
Q Consensus 385 ~~~~-----------------------~~~~iRis~~~~~~~l~~~~~~l~~~~ 415 (422)
..+. .++++|+|++. |+.+.+++.|++++
T Consensus 362 ~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvG~--e~~~dli~dl~~al 413 (414)
T 3ndn_A 362 DAKSLVTHPATTTHRAMGPEGRAAIGLGDGVVRISVGL--EDTDDLIADIDRAL 413 (414)
T ss_dssp CSSCEEECGGGTTTCTTHHHHHHHTTCCTTEEEEECCS--SCHHHHHHHHHHHH
T ss_pred CCCceeeCccccccccCCHHHHHhcCCCCCeEEEEeCc--CCHHHHHHHHHHhh
Confidence 5431 15789999985 45566666666665
No 178
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.97 E-value=4.4e-28 Score=232.55 Aligned_cols=334 Identities=13% Similarity=0.104 Sum_probs=211.3
Q ss_pred CceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCC------CCCCCHHHH----HHHHHHHhhcCCCCCCCCCEEE
Q 014603 46 PLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYS------STVGILPAR----RAIADYLNRDLPYKLSPDDVYL 115 (422)
Q Consensus 46 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~------~~~g~~~lr----~~ia~~l~~~~~~~~~~~~i~~ 115 (422)
..++|..+. + +.+|.+.+++.+++.+.....|+ .....+.++ +.+++++ +.+. ..++
T Consensus 33 ~~i~l~~~~-----~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~------~~~~-~~v~ 99 (425)
T 3ecd_A 33 SQVELIASE-----N-IVSRAVLDAQGSVLTNKYAEGYPGKRYYGGCEFADEVEALAIERVKRLF------NAGH-ANVQ 99 (425)
T ss_dssp HSEECCTTC-----C-CCCHHHHHHHTSGGGSSCTTC------------CCHHHHHHHHHHHHHH------TCSE-EECC
T ss_pred cceeeeccc-----C-CCCHHHHHHHhhhhhcccccCCCcchhcCCChHHHHHHHHHHHHHHHHh------CCCC-ceee
Confidence 457776554 1 33799999999988542211222 111111222 3344444 2222 2345
Q ss_pred ecCHHHHHHHHHHHhcCCCCEEEecCCCccc---hHHHHhhCCC--eEEEeeccCCCCcccCHHHHHHhhc-CCceEEEE
Q 014603 116 TLGCTQAIEVILTVLARPGANILLPRPGFPY---YEARATHSHL--EVRHFDLLPAKGWEVDLDAVEALAD-ENTVALVI 189 (422)
Q Consensus 116 ~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~---~~~~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~i~i 189 (422)
++||++++..++.+++++||+|+++.|+|++ +.......|. .++.++.++ +++.+|++.|++.++ ++++++++
T Consensus 100 ~~~Gs~a~~~al~~~~~~gd~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~v~~ 178 (425)
T 3ecd_A 100 PHSGAQANGAVMLALAKPGDTVLGMSLDAGGHLTHGAKPALSGKWFNALQYGVSR-DTMLIDYDQVEALAQQHKPSLIIA 178 (425)
T ss_dssp CSSHHHHHHHHHHHHCCTTCEEEEECC------------------CEEEEECCCT-TTSSCCHHHHHHHHHHHCCSEEEE
T ss_pred cCchHHHHHHHHHHccCCCCEEEEcccccccceecchhhhhcccceeeeecCCCc-ccCccCHHHHHHHHhhcCCcEEEE
Confidence 8899999999999999999999999999987 2222223444 344454432 346799999999886 57899999
Q ss_pred eCCCCCcccccCHHHHHHHHHHHHHcCcEEEEccccc-ccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEE
Q 014603 190 INPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYD-HLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLV 268 (422)
Q Consensus 190 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~-~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~ 268 (422)
++|+||+ . .++++|.++|+++|+++|+||+|. ++.+.+.....+.. . .+++.|+||++ +|+|.||++
T Consensus 179 ~~~~~~~--~---~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~~~--~---di~~~s~sK~l--~g~~~g~~~ 246 (425)
T 3ecd_A 179 GFSAYPR--K---LDFARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPVEH--A---HVVTSTTHKTL--RGPRGGFVL 246 (425)
T ss_dssp ECSCCCS--C---CCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGT--C---SEEEEESSGGG--CCCSCEEEE
T ss_pred ccccCCC--c---CCHHHHHHHHHHcCCEEEEECcChHhhhhcccccCchhc--C---cEEEecCCccc--CCCCcEEEE
Confidence 9999864 3 457899999999999999999964 33334432222221 1 28899999996 677899999
Q ss_pred eeCCCCcccchhHHHHHHhhhhh--ccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC
Q 014603 269 TSDPNGILQDSGIVDSIKSFLNI--SSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPE 346 (422)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~ 346 (422)
+++ +++.+.+...... .++++...+.++..++....+.++++..++++++++.+.+.|++. ++.+...+.
T Consensus 247 ~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~ 318 (425)
T 3ecd_A 247 TND-------EEIAKKINSAVFPGLQGGPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGDVLKAG-GVDLVTGGT 318 (425)
T ss_dssp ESC-------HHHHHHHHHHHC-----CCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSC
T ss_pred eCC-------HHHHHHHHhhhCccccCCccHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhC-CCeeccCCC
Confidence 864 3566666554432 224444444544445543333567788889999999999999985 666332234
Q ss_pred CceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEe----cCCCCC--CCCeEEEEec------cChHHHHHHHHHHHHH
Q 014603 347 GSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVL----PGITVG--LKDWLRITFA------VEPSALEDGLGRMKAF 414 (422)
Q Consensus 347 ~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~----~g~~~~--~~~~iRis~~------~~~~~l~~~~~~l~~~ 414 (422)
.+.++|+.++... .+...+ ...++++||.+. ||..+. ..+.+|++++ .++++++++++.|+++
T Consensus 319 ~~~~~~~~~~~~~----~~~~~~-~~~l~~~gi~v~~~~~p~~~~~~~~~~~iRi~~~~~~~~~~~~e~i~~~~~~l~~~ 393 (425)
T 3ecd_A 319 DNHLLLVDLRPKG----LKGAQV-EQALERAGITCNKNGIPFDPEKPTITSGIRLGTPAGTTRGFGAAEFREVGRLILEV 393 (425)
T ss_dssp SSSEEEEECGGGT----CCHHHH-HHHHHHTTEECEECCCTTCSSCTTTCSEEEEESHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred CceEEEEEeCCCC----CCHHHH-HHHHHHcCCEecccccCCCCCCCCCccceeccchhheeccCCHHHHHHHHHHHHHH
Confidence 5778888875421 134444 445577899999 443221 2468999965 2489999999999999
Q ss_pred HHHh
Q 014603 415 YDRH 418 (422)
Q Consensus 415 ~~~~ 418 (422)
+++.
T Consensus 394 l~~~ 397 (425)
T 3ecd_A 394 FEAL 397 (425)
T ss_dssp HHHH
T ss_pred Hhcc
Confidence 8775
No 179
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.97 E-value=6.3e-28 Score=227.61 Aligned_cols=313 Identities=13% Similarity=0.107 Sum_probs=223.7
Q ss_pred CCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHh---cCCCCEEE
Q 014603 62 RTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVL---ARPGANIL 138 (422)
Q Consensus 62 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l---~~~gd~Vl 138 (422)
++++.+.+++.+.+.... |.+.....++|+.++++++ . +++++++|+++|+..++.++ +++||+|+
T Consensus 10 ~~~~~v~~a~~~~~~~~~---~~~~~~~~~l~~~la~~~~------~--~~v~~~~ggt~al~~~~~~~~~~~~~gd~Vl 78 (375)
T 2fnu_A 10 CLDKEDKKAVLEVLNSKQ---LTQGKRSLLFEEALCEFLG------V--KHALVFNSATSALLTLYRNFSEFSADRNEII 78 (375)
T ss_dssp CCCHHHHHHHHHHHTSSC---CSSSHHHHHHHHHHHHHHT------C--SEEEEESCHHHHHHHHHHHSSCCCTTSCEEE
T ss_pred CCCHHHHHHHHHHHHcCc---ccCChHHHHHHHHHHHHhC------C--CeEEEeCCHHHHHHHHHHHhcccCCCCCEEE
Confidence 467899999999986532 3344567899999999993 2 38999999999999999999 88999999
Q ss_pred ecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcE
Q 014603 139 LPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIM 218 (422)
Q Consensus 139 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~ 218 (422)
++.|+|+++...+...|.+++.+++++. ..+|++.|++.++++++++++++| ||.+.+ +++|.++|+++|++
T Consensus 79 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~d~~~l~~~i~~~~~~v~~~~~---tG~~~~---l~~i~~l~~~~~~~ 150 (375)
T 2fnu_A 79 TTPISFVATANMLLESGYTPVFAGIKND--GNIDELALEKLINERTKAIVSVDY---AGKSVE---VESVQKLCKKHSLS 150 (375)
T ss_dssp ECSSSCTHHHHHHHHTTCEEEECCBCTT--SSBCGGGSGGGCCTTEEEEEEECG---GGCCCC---HHHHHHHHHHHTCE
T ss_pred ECCCccHhHHHHHHHCCCEEEEeccCCC--CCCCHHHHHhhcCcCceEEEEeCC---cCCccC---HHHHHHHHHHcCCE
Confidence 9999999999999999999999988653 268999999998888888888877 999865 78888999999999
Q ss_pred EEEcccccccccCCCCCCCccccCCCCCeEEEecCc--cccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhhhc----
Q 014603 219 VIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSIS--KRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNIS---- 292 (422)
Q Consensus 219 li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~s--K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 292 (422)
+|+|++|+.+..... ..+..++ .+.+.|+| |+++. | +|++++.+. +++.+++.......
T Consensus 151 li~D~a~~~~~~~~~--~~~~~~~----~i~~~s~s~~K~~~~-g--~g~~~~~~~------~~~~~~~~~~~~~~~~~~ 215 (375)
T 2fnu_A 151 FLSDSSHALGSEYQN--KKVGGFA----LASVFSFHAIKPITT-A--EGGAVVTND------SELHEKMKLFRSHGMLKK 215 (375)
T ss_dssp EEEECTTCTTCEETT--EETTSSS----SEEEEECCTTSSSCC-S--SCEEEEESC------HHHHHHHHHHTBTTEEES
T ss_pred EEEECccccCCeECC--eeccccC----CeEEEeCCCCCCccc-c--CceEEEeCC------HHHHHHHHHHHhcCCccc
Confidence 999999986432110 1122111 27777888 99754 6 788877421 45666666543211
Q ss_pred ----------c---CcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC-----CCceEEEEe
Q 014603 293 ----------S---DPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKP-----EGSMFVMVK 354 (422)
Q Consensus 293 ----------~---~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-----~~g~~~~~~ 354 (422)
+ ..+.+..++....+ .++++..++.+++++++.+.|+++|++.+. .+ ..+.++++.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~-----~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~ 289 (375)
T 2fnu_A 216 DFFEGEVKSIGHNFRLNEIQSALGLSQL-----KKAPFLMQKREEAALTYDRIFKDNPYFTPL-HPLLKDKSSNHLYPIL 289 (375)
T ss_dssp SSSCEEESSCCCBCCCCHHHHHHHHHHH-----TTHHHHHHHHHHHHHHHHHHHTTCSSEEES-GGGCSSCCCCSCEEEE
T ss_pred cccccccccccccCCCCHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhhcCCCcccc-CCCCCCCcceEEEEEE
Confidence 1 12222222222222 346778888999999999999998877633 33 123445666
Q ss_pred cCcccccCCCCHHHHHHHHHHhcCeEEecCCC-------CC-------C-------CCeEEEEec--cChHHHHHHHHHH
Q 014603 355 LNYSLLEGINSDMEFALKLAKEESVIVLPGIT-------VG-------L-------KDWLRITFA--VEPSALEDGLGRM 411 (422)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~-------~~-------~-------~~~iRis~~--~~~~~l~~~~~~l 411 (422)
++.... .+..++...| .++||.+..+.. |+ . .+++||+++ ++++++++++++|
T Consensus 290 ~~~~~~---~~~~~l~~~L-~~~gi~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l 365 (375)
T 2fnu_A 290 MHQKFF---TCKKLILESL-HKRGILAQVHYKPIYQYQLYQQLFNTAPLKSAEDFYHAEISLPCHANLNLESVQNIAHSV 365 (375)
T ss_dssp ECGGGG---GGHHHHHHHH-HHTTEECBCCCCCGGGSHHHHHHHCCCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHH
T ss_pred eCcccc---chHHHHHHHH-HHCCCCccccccccccchhhhcCCCccCChHHHHHHhCEEEecCCCCCCHHHHHHHHHHH
Confidence 653100 0245666665 567999983221 11 1 267999998 5899999999999
Q ss_pred HHHHHHh
Q 014603 412 KAFYDRH 418 (422)
Q Consensus 412 ~~~~~~~ 418 (422)
+++++++
T Consensus 366 ~~~~~~~ 372 (375)
T 2fnu_A 366 LKTFESF 372 (375)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9998765
No 180
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.96 E-value=1.8e-27 Score=226.07 Aligned_cols=281 Identities=20% Similarity=0.196 Sum_probs=199.0
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHH----hhCCCeEEEe
Q 014603 86 TVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARA----THSHLEVRHF 161 (422)
Q Consensus 86 ~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~----~~~g~~~~~~ 161 (422)
.....++++.++++++ . ++.+++++|++|++.++.+++++||+|+++.++|+++...+ ...|.+++.+
T Consensus 64 ~~~~~~l~~~la~~~g------~--~~~i~~~sG~~a~~~~l~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~ 135 (398)
T 1gc0_A 64 NPTLNLLEARMASLEG------G--EAGLALASGMGAITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHV 135 (398)
T ss_dssp CHHHHHHHHHHHHHHT------C--SEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCSHHHHHHHHTGGGGTCEEEEE
T ss_pred ChHHHHHHHHHHHHhC------C--CcEEEECCHHHHHHHHHHHHhcCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEE
Confidence 3456788999999883 2 25666777789999999999999999999999999876655 5678888877
Q ss_pred eccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCcccc
Q 014603 162 DLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF 241 (422)
Q Consensus 162 ~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~ 241 (422)
+. .|++.+++.++++++++++++|+||||.+++ +++|.++|+++|+++|+|++|..+.+.. ++ ..
T Consensus 136 ~~-------~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~~~~~~~~~~----~~-~~ 200 (398)
T 1gc0_A 136 DM-------ADLQALEAAMTPATRVIYFESPANPNMHMAD---IAGVAKIARKHGATVVVDNTYCTPYLQR----PL-EL 200 (398)
T ss_dssp CT-------TCHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHGGGTCEEEEECTTTHHHHCC----GG-GG
T ss_pred CC-------CCHHHHHHhcCCCCeEEEEECCCCCCccccc---HHHHHHHHHHcCCEEEEECCCcccccCC----ch-hh
Confidence 64 2789999999889999999999999999974 8888999999999999999998654321 22 22
Q ss_pred CCCCCeEEEecCccccCCCCcee-EEEEeeCCCCcccchhHHH-HHHhhhhh--ccCcchHHHHHHHHHHhhchHHHHHH
Q 014603 242 GSIVPVLTLGSISKRWIVPGWRL-GWLVTSDPNGILQDSGIVD-SIKSFLNI--SSDPATFIQGAVPQILEKTEEEFFSK 317 (422)
Q Consensus 242 ~~~~~~i~i~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~ 317 (422)
+ ..+++.|+||.++++|.|+ |++++++ +.+. .+...... .++.+++.++++.+.++. +..
T Consensus 201 ~---~d~~~~S~sK~~~~~~~~~~G~l~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~ 264 (398)
T 1gc0_A 201 G---ADLVVHSATKYLSGHGDITAGIVVGSQ--------ALVDRIRLQGLKDMTGAVLSPHDAALLMRGIKT-----LNL 264 (398)
T ss_dssp T---CSEEEEETTTTTTCSSSCCCEEEEECH--------HHHHHHHHTHHHHHTCCCCCHHHHHHHHHHHTT-----HHH
T ss_pred C---ceEEEECCccccCCCCCCeEEEEEECh--------HHHHHHHHHHhhccCCCCCCHHHHHHHHhccch-----HHH
Confidence 2 3488999999999999998 9988853 4443 45544432 346777888887777764 344
Q ss_pred HHHHHHHHHHHHHHHhhcCCCC--------------CCCCC--CCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEE
Q 014603 318 ITDILRETADICCDRLKEIPCI--------------TCPKK--PEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIV 381 (422)
Q Consensus 318 ~~~~~~~~~~~l~~~L~~~~~~--------------~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v 381 (422)
+.++..++.+.+.+.|++++.+ .+... +..+.++.+.++. ..+....++++.++.+
T Consensus 265 ~~~~~~~~~~~l~~~L~~~~~v~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~--------~~~~~~~~l~~~~i~~ 336 (398)
T 1gc0_A 265 RMDRHCANAQVLAEFLARQPQVELIHYPGLASFPQYTLARQQMSQPGGMIAFELKG--------GIGAGRRFMNALQLFS 336 (398)
T ss_dssp HHHHHHHHHHHHHHHHHTCTTEEEEEEC----------------CCTTEEEEEETT--------HHHHHHHHHHHCSSSE
T ss_pred HHHHHHHHHHHHHHHHhcCCCeeEEECCCCCCCcCHHHHHhhCCCCceEEEEEECC--------CHHHHHHHHHhCCCce
Confidence 5556666677777777665432 21100 1234555566642 2334556667778877
Q ss_pred ec---CCC------C----------------CC-CCeEEEEec--cChHHHHHHHHHHHH
Q 014603 382 LP---GIT------V----------------GL-KDWLRITFA--VEPSALEDGLGRMKA 413 (422)
Q Consensus 382 ~~---g~~------~----------------~~-~~~iRis~~--~~~~~l~~~~~~l~~ 413 (422)
.. |+. + +. ++.+|+|++ .++++++.+.+.|++
T Consensus 337 ~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~~~~~~~i~~l~~al~~ 396 (398)
T 1gc0_A 337 RAVSLGDAESLAQHPASMTHSSYTPEERAHYGISEGLVRLSVGLEDIDDLLADVQQALKA 396 (398)
T ss_dssp ECSCCSCSSCEEECGGGTTTSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred eccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHh
Confidence 65 321 0 11 479999998 446677776666654
No 181
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.96 E-value=3e-28 Score=231.20 Aligned_cols=325 Identities=15% Similarity=0.137 Sum_probs=222.5
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCC-CCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYS-STVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ 121 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~-~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 121 (422)
...++++|+.+.|. .++++.+++.+.+... .|. +..+..++|+.++++++ .+++++++||++
T Consensus 20 ~~~~~~~l~~~~p~------~~~~~~~a~~~~~~~~---~~~~~~~~~~~l~~~la~~~~--------~~~~i~~~~gt~ 82 (391)
T 3dr4_A 20 HMSDLPRISVAAPR------LDGNERDYVLECMDTT---WISSVGRFIVEFEKAFADYCG--------VKHAIACNNGTT 82 (391)
T ss_dssp --------CCCCCC------CCSSHHHHHHHHHHHT---CCSSCSHHHHHHHHHHHHHHT--------CSEEEEESSHHH
T ss_pred hcCCCceeccCCCC------CCHHHHHHHHHHHHcC---CccCCChHHHHHHHHHHHHhC--------CCcEEEeCCHHH
Confidence 34678899988854 2367888888887653 344 56778999999999993 237899999999
Q ss_pred HHHHHHHHh-cCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCccccc
Q 014603 122 AIEVILTVL-ARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVY 200 (422)
Q Consensus 122 a~~~~~~~l-~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~ 200 (422)
|++.++.++ +++||+|+++.|+|+++...+...|.+++.+++++ +++.+|++.+++.+++++++++ ++||||...
T Consensus 83 al~~~l~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~~~~~~~~v~---~~n~tG~~~ 158 (391)
T 3dr4_A 83 ALHLALVAMGIGPGDEVIVPSLTYIASANSVTYCGATPVLVDNDP-RTFNLDAAKLEALITPRTKAIM---PVHLYGQIC 158 (391)
T ss_dssp HHHHHHHHHTCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECBCT-TTCSBCGGGSGGGCCTTEEEEC---CBCGGGCCC
T ss_pred HHHHHHHHcCCCCcCEEEECCCchHHHHHHHHHCCCEEEEEecCc-cccCcCHHHHHHhcCCCceEEE---EECCCCChh
Confidence 999999999 89999999999999999999999999999999864 3567899999999988887776 568999984
Q ss_pred CHHHHHHHHHHHHHcCcEEEEcccccccc-cCCCCCCCccccCCCCCeEEEecCc--cccCCCCceeEEEEeeCCCCccc
Q 014603 201 TYQHLQKIAETAKKLGIMVIADEVYDHLA-FGNTPFVPMGVFGSIVPVLTLGSIS--KRWIVPGWRLGWLVTSDPNGILQ 277 (422)
Q Consensus 201 ~~~~l~~i~~~~~~~~~~li~D~~~~~~~-~~~~~~~~~~~~~~~~~~i~i~s~s--K~~~~~G~r~G~~~~~~~~~~~~ 277 (422)
++++|.++|+++|+++|+|++|+... +.+. ....+. + +.+.||| |++ +|.+.|++++++
T Consensus 159 ---~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~---~~~~~~-d---i~~~S~s~~K~l--~~g~gg~~~~~~------ 220 (391)
T 3dr4_A 159 ---DMDPILEVARRHNLLVIEDAAEAVGATYRGK---KSGSLG-D---CATFSFFGNAII--TTGEGGMITTND------ 220 (391)
T ss_dssp ---CHHHHHHHHHHTTCEEEEECTTCTTCEETTE---ETTSSS-S---EEEEECBTTSSS--CCBSCEEEEESC------
T ss_pred ---hHHHHHHHHHHcCCEEEEECcccccceECCe---eecccC-C---EEEEECCCCCcC--CcCCeEEEEECC------
Confidence 57888999999999999999998522 2221 111221 1 6677766 764 445688888864
Q ss_pred chhHHHHHHhhhhhccC-------------cchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC
Q 014603 278 DSGIVDSIKSFLNISSD-------------PATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKK 344 (422)
Q Consensus 278 ~~~~~~~~~~~~~~~~~-------------~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 344 (422)
+++.+++......... .......++..... ...+++..++.+++.+.+.+.|+++ ++.+...
T Consensus 221 -~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~l~aa~~~~~---~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~ 295 (391)
T 3dr4_A 221 -DDLAAKMRLLRGQGMDPNRRYWFPIVGFNYRMTNIQAAIGLAQ---LERVDEHLAARERVVGWYEQKLARL-GNRVTKP 295 (391)
T ss_dssp -HHHHHHHHHHHBTTCCTTSTTCCSSCCCBCBCCHHHHHHHHHH---HHTHHHHHHHHHHHHHHHHHHHGGG-TTSEECC
T ss_pred -HHHHHHHHHHHhcCCCCCCcccccccccccCCCHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHhhcC-CccccCc
Confidence 4566666554321110 11112222222221 2345667788888888999999987 6663322
Q ss_pred --CC----CceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCC---C-----------------CCCeEEEEec
Q 014603 345 --PE----GSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITV---G-----------------LKDWLRITFA 398 (422)
Q Consensus 345 --~~----~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~---~-----------------~~~~iRis~~ 398 (422)
+. ....+++.++.. .+ .+..++...+ .++||.+.+|... . ....+|+++.
T Consensus 296 ~~~~~~~~~~~~~~i~~~~~--~~-~~~~~l~~~L-~~~GI~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~ 371 (391)
T 3dr4_A 296 HVALTGRHVFWMYTVRLGEG--LS-TTRDQVIKDL-DALGIESRPVFHPMHIMPPYAHLATDDLKIAEACGVDGLNLPTH 371 (391)
T ss_dssp CCCTTSCCCCSSEEEEECSS--CS-SCHHHHHHHH-HHTTCCCEECCCCGGGSGGGGGGCCTTCHHHHHHHHHEEEECCC
T ss_pred CCCCCCcceeEEEEEEECCc--cc-hhHHHHHHHH-HHCCCceeecCCccccChhhhhcCcCCChHHHHHHhCeEEccCC
Confidence 11 122345555531 01 2466676666 5569999988521 0 0357899987
Q ss_pred --cChHHHHHHHHHHHHHH
Q 014603 399 --VEPSALEDGLGRMKAFY 415 (422)
Q Consensus 399 --~~~~~l~~~~~~l~~~~ 415 (422)
++++|++++++.|++++
T Consensus 372 ~~~t~edi~~~~~~l~~~l 390 (391)
T 3dr4_A 372 AGLTEADIDRVIAALDQVL 390 (391)
T ss_dssp TTCCHHHHHHHHHHHHTTC
T ss_pred CCCCHHHHHHHHHHHHHHh
Confidence 78999999999988653
No 182
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.96 E-value=1.4e-28 Score=233.94 Aligned_cols=324 Identities=11% Similarity=0.048 Sum_probs=216.1
Q ss_pred CCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCC-CCCCCCCC--CCCHHHHHHHHHHHhhcCCCCCCCCCEEE-ecCHH
Q 014603 45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSA-RFNCYSST--VGILPARRAIADYLNRDLPYKLSPDDVYL-TLGCT 120 (422)
Q Consensus 45 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~y~~~--~g~~~lr~~ia~~l~~~~~~~~~~~~i~~-~~g~~ 120 (422)
+.+++|+.|. .++++.+++++.+..... ....+.+. ....++|+.+++++ |.. ++++|++ |+|++
T Consensus 39 ~~~~~~~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----g~~-~~~~i~~~t~g~t 107 (398)
T 2fyf_A 39 PRDGRFGSGP------SKVRLEQLQTLTTTAAALFGTSHRQAPVKNLVGRVRSGLAELF----SLP-DGYEVILGNGGAT 107 (398)
T ss_dssp CSSCBCCSSS------CCCCHHHHHGGGTTTTTTTTSCTTSHHHHHHHHHHHHHHHHHT----TCC-TTCEEEEEETCHH
T ss_pred cCCccccCCC------CCCCHHHHHHHhhcCCCccCcCcCCHHHHHHHHHHHHHHHHHh----CCC-CCceEEEeCCchh
Confidence 4456776553 367789999887732110 00122221 12345666666666 322 3468998 99999
Q ss_pred HHHHHHHHHhcCCCCEEEecCCCccc-hHHHHhhC--CCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcc
Q 014603 121 QAIEVILTVLARPGANILLPRPGFPY-YEARATHS--HLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCG 197 (422)
Q Consensus 121 ~a~~~~~~~l~~~gd~Vl~~~~~~~~-~~~~~~~~--g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG 197 (422)
++++.++.+++++| .+++..+.|.. ....+... |.+++.++.+ +++..+. .++++++++++++|+||||
T Consensus 108 ~al~~~~~~l~~~g-v~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~g~~~~~-----~i~~~~~~v~~~~~~nptG 179 (398)
T 2fyf_A 108 AFWDAAAFGLIDKR-SLHLTYGEFSAKFASAVSKNPFVGEPIIITSD--PGSAPEP-----QTDPSVDVIAWAHNETSTG 179 (398)
T ss_dssp HHHHHHHHHTCSSC-EEEEECSHHHHHHHHHHHHCTTSCCCEEEECC--TTCCCCC-----CCCTTCSEEEEESEETTTT
T ss_pred HHHHHHHHHhcCCC-eEEEeCCHHHHHHHHHHHHhCCCCceEEEecC--CCCCCCc-----cccCCCCEEEEeCcCCCcc
Confidence 99999999998887 22333333321 12234555 7788888765 2322332 2466789999999999999
Q ss_pred cccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCccc
Q 014603 198 NVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQ 277 (422)
Q Consensus 198 ~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~ 277 (422)
.+++.+++.++ +|+++|+|++|+.+.. ..++. + ..+++.|+||+++++| ++||++++
T Consensus 180 ~~~~~~~i~~~------~~~~vivD~a~~~~~~----~~~~~--~---~di~~~s~sK~~~~~g-g~g~l~~~------- 236 (398)
T 2fyf_A 180 VAVAVRRPEGS------DDALVVIDATSGAGGL----PVDIA--E---TDAYYFAPQKNFASDG-GLWLAIMS------- 236 (398)
T ss_dssp EECCCCCCTTC------C-CEEEEECTTTTTTS----CCCGG--G---CSEEEECTTSTTCSCS-SEEEEEEC-------
T ss_pred eecchHHhhhh------cCCeEEEEeccccCCc----ccCcc--c---CcEEEEecCcccCCCC-ceEEEEEC-------
Confidence 99987776665 7999999999986431 11222 1 2378899999988875 59999886
Q ss_pred chhHHHHHHhh----------------------hhhccCcchHHHHHHHHHHhhchHHH-HHHHHHHHHHHHHHHHHHhh
Q 014603 278 DSGIVDSIKSF----------------------LNISSDPATFIQGAVPQILEKTEEEF-FSKITDILRETADICCDRLK 334 (422)
Q Consensus 278 ~~~~~~~~~~~----------------------~~~~~~~~~~~~~a~~~~l~~~~~~~-~~~~~~~~~~~~~~l~~~L~ 334 (422)
++++++++.. ....++++...+.++.++++...+.. +++..++++++++.+.+.|+
T Consensus 237 -~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~ 315 (398)
T 2fyf_A 237 -PAALSRIEAIAATGRWVPDFLSLPIAVENSLKNQTYNTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSSQRLYSWAQ 315 (398)
T ss_dssp -HHHHHHHHHHHHTTCCCCGGGCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHhhcccccCCCCCcEEehHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHH
Confidence 4566665321 01123566677777777887533333 78889999999999999999
Q ss_pred cCCCCCCCC-CC--CCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHH
Q 014603 335 EIPCITCPK-KP--EGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLG 409 (422)
Q Consensus 335 ~~~~~~~~~-~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~ 409 (422)
+++++.+.. .| ..+.++|+.++.. .+..++...|.+ +||.+.+|......+++||+++ +++++++++++
T Consensus 316 ~~~g~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~L~~-~gI~v~~g~~~~~~~~iRis~~~~~t~e~i~~~~~ 389 (398)
T 2fyf_A 316 ERPYTTPFVTDPGLRSQVVGTIDFVDD-----VDAGTVAKILRA-NGIVDTEPYRKLGRNQLRVAMFPAVEPDDVSALTE 389 (398)
T ss_dssp HSTTEEESCCSGGGBCSSEEEEEECTT-----SCHHHHHHHHHH-TTCBCCSCCTTTCSSEEEEECCTTSCHHHHHHHHH
T ss_pred HcCCceeccCChhhcCCcEEEEECCCC-----CCHHHHHHHHHH-CCcEEecCcccCCCCEEEEEecCCCCHHHHHHHHH
Confidence 987776332 24 2344888888532 256677777655 4999998743222579999998 68999999999
Q ss_pred HHHHHHHH
Q 014603 410 RMKAFYDR 417 (422)
Q Consensus 410 ~l~~~~~~ 417 (422)
+|++++++
T Consensus 390 ~l~~~l~~ 397 (398)
T 2fyf_A 390 CVDWVVER 397 (398)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 99998764
No 183
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.96 E-value=2.3e-27 Score=231.38 Aligned_cols=367 Identities=14% Similarity=0.075 Sum_probs=247.7
Q ss_pred HHHHHHHHHhhhhccCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCC
Q 014603 28 VRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYK 107 (422)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~ 107 (422)
...++..+...+. .++.+.+++..-.+ .++++.+.+++.+.+..... .|....+..++++.+.+++.+.+|.+
T Consensus 39 ~~~~~~~~~~~i~-l~gnp~~~l~s~~t-----~~~~~~v~~~l~~~~~~~~~-~~~~~p~~~~le~~~~~~la~l~g~~ 111 (502)
T 3hbx_A 39 KEAAYQIINDELM-LDGNPRLNLASFVT-----TWMEPECDKLIMSSINKNYV-DMDEYPVTTELQNRCVNMIAHLFNAP 111 (502)
T ss_dssp HHHHHHHHHHHGG-GSCCGGGBTTCCSC-----CCCCHHHHHHHHHTTTCBTT-CTTTCHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHhc-cCCCCCceeccccC-----CCCCHHHHHHHHHHhccCCC-ChhcChhHHHHHHHHHHHHHHHhCCC
Confidence 4555544443332 24566666654222 25678899999988765322 34344446788888888888777755
Q ss_pred CCCCCEE---EecCHHHHHHHHHHHhcCC--------CC-----EEEecCCCccchHHHHhhCCCeEEEeeccCCCCccc
Q 014603 108 LSPDDVY---LTLGCTQAIEVILTVLARP--------GA-----NILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEV 171 (422)
Q Consensus 108 ~~~~~i~---~~~g~~~a~~~~~~~l~~~--------gd-----~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 171 (422)
.++++++ +|+|+++++..++.++..+ |+ +|+++.++|..+...++..|++++.+++++ +++.+
T Consensus 112 ~~~~~~~~g~~t~ggtea~~~a~~a~~~~~~~~~~~~G~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~~-~~~~~ 190 (502)
T 3hbx_A 112 LEEAETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPVDKPNIVTGANVQVCWEKFARYFEVELKEVKLSE-GYYVM 190 (502)
T ss_dssp CCSSCCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEEETTCCHHHHHHHHHTTCEEEEECCBT-TBCSC
T ss_pred cccccCCcceecCcHHHHHHHHHHHHHHHHhHHHHhcCCCCCCcEEEEcCCchHHHHHHHHHcCceeEEEecCC-CcCcC
Confidence 4355443 5899999999998877554 76 999999999999999999999999999754 34779
Q ss_pred CHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHc------CcEEEEccccccccc---CCCCCCCccccC
Q 014603 172 DLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKL------GIMVIADEVYDHLAF---GNTPFVPMGVFG 242 (422)
Q Consensus 172 d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~------~~~li~D~~~~~~~~---~~~~~~~~~~~~ 242 (422)
|++.|++.++++++++++++|+||||.+ +++++|.++|+++ |+++++|++|+.+.. .+.....+...
T Consensus 191 d~~~l~~~i~~~t~~v~~~~~~n~tG~~---~~l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~~~~~~~- 266 (502)
T 3hbx_A 191 DPQQAVDMVDENTICVAAILGSTLNGEF---EDVKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLP- 266 (502)
T ss_dssp CHHHHHHHCCTTEEEEEEEBSCTTTCCB---CCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTST-
T ss_pred CHHHHHHHHhhCCEEEEEecCCCCCCcc---cCHHHHHHHHHHhhhccCCCCeEEEECCccchhhhhhCcccccccCCC-
Confidence 9999999999999999999999999999 4577888888898 999999999986531 22222222211
Q ss_pred CCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHH---hhhh-------hccCcchHHHHHHHHHHhhchH
Q 014603 243 SIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIK---SFLN-------ISSDPATFIQGAVPQILEKTEE 312 (422)
Q Consensus 243 ~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~---~~~~-------~~~~~~~~~~~a~~~~l~~~~~ 312 (422)
.-.++..|.+|+ +..+.++|++++.++... .+.+. .+.. ..++.+.....+...++.....
T Consensus 267 --~~D~v~~s~hK~-l~~p~g~G~~~~~~~~~l------~~~~~~~~~yl~~~~~~~~~~~sr~~~~~~a~~~al~~lg~ 337 (502)
T 3hbx_A 267 --LVKSINVSGHKY-GLVYAGIGWVIWRNKEDL------PEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGH 337 (502)
T ss_dssp --TEEEEEEETTTT-TCCCSSCEEEEESSGGGS------CGGGCEEECSSSSCEEECCSCCSCBSHHHHHHHHHHHHHHH
T ss_pred --CceEEEECcccc-cCCCCCeEEEEEeCHHHh------hHHhccCcccccCCCCCccccCCchHHHHHHHHHHHHHHHH
Confidence 113667789998 556677999988653211 01110 0000 0012222222333333433334
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC-CCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCC---
Q 014603 313 EFFSKITDILRETADICCDRLKEIPCITCPKKP-EGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVG--- 388 (422)
Q Consensus 313 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~--- 388 (422)
..+.++.++..++++++.+.|++++++.++ .+ ....++.++++... . .+..++...| .++|+.+.....+.
T Consensus 338 ~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~-~~~~~~~~v~f~~~~~~--~-~~~~~l~~~L-~~~Gi~v~~~~~p~~~~ 412 (502)
T 3hbx_A 338 EGYRNVMENCRENMIVLREGLEKTERFNIV-SKDEGVPLVAFSLKDSS--C-HTEFEISDML-RRYGWIVPAYTMPPNAQ 412 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCEEEC-SCSSSSSEEEEEESSCS--S-CCHHHHHHHH-HTTTCBCCEEECCTTCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEE-eCCCCceEEEEEecCCC--c-CCHHHHHHHH-HhCCcEEeeccCCcccC
Confidence 567888888999999999999999878744 33 34556667775321 0 1345666665 56799875433221
Q ss_pred CCCeEEEEec--cChHHHHHHHHHHHHHHHHhcc
Q 014603 389 LKDWLRITFA--VEPSALEDGLGRMKAFYDRHAK 420 (422)
Q Consensus 389 ~~~~iRis~~--~~~~~l~~~~~~l~~~~~~~~~ 420 (422)
...++||+++ ++.++++.+++.|+++++++.+
T Consensus 413 ~~~~lRisv~~~~t~edid~li~~L~~~l~~l~~ 446 (502)
T 3hbx_A 413 HITVLRVVIREDFSRTLAERLVIDIEKVMRELDE 446 (502)
T ss_dssp TCEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred CceEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 2358999998 6899999999999999987654
No 184
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.96 E-value=6.5e-27 Score=223.27 Aligned_cols=308 Identities=17% Similarity=0.157 Sum_probs=212.4
Q ss_pred CCCcHHHHHHHHHHhhCCCCCCCCCC--CCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEE
Q 014603 61 FRTASVAVDAIVHSVRSARFNCYSST--VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANIL 138 (422)
Q Consensus 61 ~~~~~~v~~a~~~~~~~~~~~~y~~~--~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl 138 (422)
++.++.+.+++. ... ...|... ....++|+.++++++ .+++++++|+++|++.++.+++++||+|+
T Consensus 32 ~~~~~~~~~~~~---~~~-~~~y~~~~~~~~~~l~~~la~~~g--------~~~~~~~~~gt~a~~~al~~l~~~gd~vi 99 (412)
T 2cb1_A 32 FKTLEEGQERFA---TGE-GYVYARQKDPTAKALEERLKALEG--------ALEAVVLASGQAATFAALLALLRPGDEVV 99 (412)
T ss_dssp CSSHHHHHHHHH---HCC-SCSBTTTCCHHHHHHHHHHHHHHT--------CSEEEEESSHHHHHHHHHHTTCCTTCEEE
T ss_pred cCChHHHHHHhc---ccc-CcCcCCCCChHHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCCCEEE
Confidence 566666766654 222 2356543 457889999999983 24899999999999999999999999999
Q ss_pred ecCCCccchHHH----HhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHH
Q 014603 139 LPRPGFPYYEAR----ATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKK 214 (422)
Q Consensus 139 ~~~~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~ 214 (422)
++.|+|++.... ++..|.+++.++. |++.|++.++++++++++++|+||+|.+++ +++|.++|++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--------~~~~l~~~i~~~~~~v~~~~~~n~~G~~~~---l~~i~~l~~~ 168 (412)
T 2cb1_A 100 AAKGLFGQTIGLFGQVLSLMGVTVRYVDP--------EPEAVREALSAKTRAVFVETVANPALLVPD---LEALATLAEE 168 (412)
T ss_dssp EETTCCHHHHHHHHHTTTTTTCEEEEECS--------SHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHH
T ss_pred EeCCCchhHHHHHHHHHHHcCCEEEEECC--------CHHHHHHHhccCCeEEEEeCCCCCCccccc---HHHHHHHHHH
Confidence 999999875544 3457888887763 488999999889999999999999999974 8889999999
Q ss_pred cCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCc------cc-----------
Q 014603 215 LGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGI------LQ----------- 277 (422)
Q Consensus 215 ~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~------~~----------- 277 (422)
+|+++|+|++|+.+.+.. .+. ..+ ..+++.|+||+++++|.|+|++++.+.... +.
T Consensus 169 ~~~~li~D~~~~~~~~~~---~~~-~~~---~di~~~S~~K~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 241 (412)
T 2cb1_A 169 AGVALVVDNTFGAAGALC---RPL-AWG---AHVVVESLTKWASGHGSVLGGAVLSRETELWRNYPQFLQPDLKGQIPWE 241 (412)
T ss_dssp HTCEEEEECGGGTTTTSC---CGG-GGT---CSEEEEETTTTTTCSSCCCCEEEEECCCSGGGGSGGGGCC-------HH
T ss_pred cCCEEEEECCCccccccC---Ccc-ccC---CeEEEECCcccccCCCCcEEEEEEeccccccccccccccccccccchhh
Confidence 999999999998752111 111 122 348999999999999999999987653210 00
Q ss_pred ---chhHHHHHHhhh-hhc-cCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC-------
Q 014603 278 ---DSGIVDSIKSFL-NIS-SDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKP------- 345 (422)
Q Consensus 278 ---~~~~~~~~~~~~-~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~------- 345 (422)
..++.+.++... ... ...++...+.+...++. +....++..++.+.+.+.|++.+++..+..|
T Consensus 242 ~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~~l~~-----l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~~~~~p~ 316 (412)
T 2cb1_A 242 ALRARCFPERVRTLGLSLCGMALSPFNAYLLFQGLET-----VALRVARMSETARFLAERLQGHPKVKALRYPGLPEDPA 316 (412)
T ss_dssp HHGGGHHHHHHHHHHTTTTCCCCCHHHHHHHHHHGGG-----HHHHHHHHHHHHHHHHHHHHTCTTCSEEECTTSTTCTT
T ss_pred ccchHHHHHHHHHHHHHhcCCCCChHHhHHHHcCCch-----HHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCcc
Confidence 003444444433 211 12344444444444543 3455566678888999999988877633223
Q ss_pred ---------CCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCC---------CCC----------------C-C
Q 014603 346 ---------EGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGI---------TVG----------------L-K 390 (422)
Q Consensus 346 ---------~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~---------~~~----------------~-~ 390 (422)
..+.++.+.+ . +..+ +..++++.||.+ .++ .|. . +
T Consensus 317 ~~~~~~~~~~~~~iv~~~~-~-------~~~~-~~~~l~~~~i~~-~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~ 386 (412)
T 2cb1_A 317 HRNARKYLASGGPILTLDL-G-------DLER-ASRFLGAIRLLK-AANLGDARTLLVHPWTTTHSRLKEEARLQAGVTP 386 (412)
T ss_dssp HHHHHHHCSSSCSEEEEEC-S-------SHHH-HHHHHHHCSSEE-CSCCSCSSCEEECTTTTTTTTSCHHHHHHTTCCT
T ss_pred HHHHHHhCCCCceEEEEEe-C-------CHHH-HHHHHHhCCeee-ecccCCCcceeecCcccccccCCHHHHHhcCCCC
Confidence 2344556666 2 2333 445567789998 763 221 1 5
Q ss_pred CeEEEEec--cChHHHHHHHHHHHH
Q 014603 391 DWLRITFA--VEPSALEDGLGRMKA 413 (422)
Q Consensus 391 ~~iRis~~--~~~~~l~~~~~~l~~ 413 (422)
+.+|+|++ +++++++.+++.|++
T Consensus 387 ~~iR~s~g~~~~~~~i~~l~~al~~ 411 (412)
T 2cb1_A 387 GLVRVSVGLEDPLDLLALFEEALEA 411 (412)
T ss_dssp TEEEEECCSSCHHHHHHHHHHHHHC
T ss_pred CeEEEEeccCCHHHHHHHHHHHHhh
Confidence 78999998 556788777777653
No 185
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.96 E-value=6e-28 Score=232.80 Aligned_cols=337 Identities=16% Similarity=0.090 Sum_probs=221.9
Q ss_pred CceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCC---CCCHHHH--HHHH-HHHhhcCCCCCCCCCEEE-ecC
Q 014603 46 PLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSST---VGILPAR--RAIA-DYLNRDLPYKLSPDDVYL-TLG 118 (422)
Q Consensus 46 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~---~g~~~lr--~~ia-~~l~~~~~~~~~~~~i~~-~~g 118 (422)
+.|+|..+. + +.+|.+.+++.+.+.+.....|+.. .+....+ +.++ +++.+.+| .+ .+.+ ++|
T Consensus 46 ~~i~l~~~~-~-----~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~~e~~a~~~la~~~g--~~--~~~v~~~s 115 (447)
T 3h7f_A 46 DTLEMIASE-N-----FVPRAVLQAQGSVLTNKYAEGLPGRRYYGGCEHVDVVENLARDRAKALFG--AE--FANVQPHS 115 (447)
T ss_dssp HSEECCTTC-C-----CCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHT--CS--EEECCCSS
T ss_pred CceeEecCC-C-----CCCHHHHHHHHHHhcCCccccCCcccccCccHHHHHHHHHHHHHHHHHcC--CC--ceEEEeCC
Confidence 568885443 2 3489999999988754322334321 2333333 3333 44433332 22 3444 888
Q ss_pred HHHHHHHHHHHhcCCCCEEEecCCCccch-HHH--Hhh--CCCeEEEeeccCCCCcccCHHHHHHhhc-CCceEEEEeCC
Q 014603 119 CTQAIEVILTVLARPGANILLPRPGFPYY-EAR--ATH--SHLEVRHFDLLPAKGWEVDLDAVEALAD-ENTVALVIINP 192 (422)
Q Consensus 119 ~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~-~~~--~~~--~g~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~i~i~~p 192 (422)
|++|+..++.+++++||+|++++|+|.++ ... ... .+..++.+++++ +++.+|++.+++.+. .+++++++++|
T Consensus 116 Gs~a~~~a~~~~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~i~~~~~ 194 (447)
T 3h7f_A 116 GAQANAAVLHALMSPGERLLGLDLANGGHLTHGMRLNFSGKLYENGFYGVDP-ATHLIDMDAVRATALEFRPKVIIAGWS 194 (447)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHSSEEEEECCCT-TTCSCCHHHHHHHHHHHCCSEEEEECS
T ss_pred HHHHHHHHHHHhcCCCCEEEecCcccccccchhhhhhhcCCeeEEEEcCcCc-ccCCcCHHHHHHHHHhcCCeEEEEcCC
Confidence 89999999999999999999999998762 111 112 234455555543 346789999999884 36788888899
Q ss_pred CCCcccccCHHHHHHHHHHHHHcCcEEEEccccc-ccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeC
Q 014603 193 GNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYD-HLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD 271 (422)
Q Consensus 193 ~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~-~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~ 271 (422)
+||++. ++++|.++|+++|+++|+|++|. ++.+.+.....+. .. .+++.|+||++ +|+|.||++++
T Consensus 195 ~~~~~~-----~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~~~~--~~---di~~~s~sK~l--~G~~gG~i~~~- 261 (447)
T 3h7f_A 195 AYPRVL-----DFAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSPVP--HA---DVVSTTVHKTL--GGGRSGLIVGK- 261 (447)
T ss_dssp SCCSCC-----CHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTT--TC---SEEEEESSGGG--CCCSCEEEEEC-
T ss_pred CCCCcc-----CHHHHHHHHHHcCCEEEEECCchhhhhcCCCCCCCCC--CC---cEEEecCCcCC--CCCCeEEEEEC-
Confidence 998876 58999999999999999999974 3334443222221 11 27789999986 47889999986
Q ss_pred CCCcccchhHHHHHHhhhh--hccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcC----CCCCCCCCC
Q 014603 272 PNGILQDSGIVDSIKSFLN--ISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEI----PCITCPKKP 345 (422)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~~~~ 345 (422)
+++.+.+..... ..++++...+.++..++....+.++++..+++.++++.+.+.|++. +++.++..+
T Consensus 262 -------~~~~~~l~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~ 334 (447)
T 3h7f_A 262 -------QQYAKAINSAVFPGQQGGPLMHVIAGKAVALKIAATPEFADRQRRTLSGARIIADRLMAPDVAKAGVSVVSGG 334 (447)
T ss_dssp -------GGGHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHTSHHHHHTTCEEGGGS
T ss_pred -------HHHHHHHhhhcCCcccCCccHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHhccccCCCeEEecCC
Confidence 356777765532 2234444445555555554334466888889999999999999876 466633233
Q ss_pred CCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEe----cC--CCCCCCCeEEEEec------cChHHHHHHHHHHHH
Q 014603 346 EGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVL----PG--ITVGLKDWLRITFA------VEPSALEDGLGRMKA 413 (422)
Q Consensus 346 ~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~----~g--~~~~~~~~iRis~~------~~~~~l~~~~~~l~~ 413 (422)
..+.++|+.+.... ...+.+..++++.||.+. |+ ..+...+++|+++. .++++++++++.|.+
T Consensus 335 ~~~~~~~~~~~~~~-----~~~~~~~~~l~~~GI~v~~~~i~~~~~~p~~~~~lRig~~~~~~~~~~~eei~~~~~~l~~ 409 (447)
T 3h7f_A 335 TDVHLVLVDLRDSP-----LDGQAAEDLLHEVGITVNRNAVPNDPRPPMVTSGLRIGTPALATRGFGDTEFTEVADIIAT 409 (447)
T ss_dssp CSSSEEEEECTTSS-----CCHHHHHHHHHHTTEECBC-------------CEEEEECHHHHHHTCCHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCC-----CCHHHHHHHHHHCCeEEecccCCCCCCCCCCCCceeccCHHHhhCCCCHHHHHHHHHHHHH
Confidence 45678888775321 133445566677899998 66 23334678999985 468999999999999
Q ss_pred HHHHh
Q 014603 414 FYDRH 418 (422)
Q Consensus 414 ~~~~~ 418 (422)
++.+.
T Consensus 410 ~l~~~ 414 (447)
T 3h7f_A 410 ALATG 414 (447)
T ss_dssp HHHSG
T ss_pred HHhcc
Confidence 98764
No 186
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.96 E-value=9.4e-29 Score=233.12 Aligned_cols=311 Identities=16% Similarity=0.141 Sum_probs=217.4
Q ss_pred CcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHh-cCCCCEEEecC
Q 014603 63 TASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVL-ARPGANILLPR 141 (422)
Q Consensus 63 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l-~~~gd~Vl~~~ 141 (422)
.++++.+++.+.+... .|.+..+..++|+.++++++ .+++++++||++|++.++.++ +++||+|+++.
T Consensus 15 ~~~~~~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~~--------~~~~i~~~sgt~al~~~l~~l~~~~gd~Vi~~~ 83 (373)
T 3frk_A 15 IEYEIKFKFEEIYKRN---WFILGDEDKKFEQEFADYCN--------VNYCIGCGNGLDALHLILKGYDIGFGDEVIVPS 83 (373)
T ss_dssp HHHHHHHHHHHHHHHT---CCSSSHHHHHHHHHHHHHHT--------SSEEEEESCHHHHHHHHHHHTTCCTTCEEEEET
T ss_pred CCHHHHHHHHHHHHCC---CccCCchHHHHHHHHHHHhC--------CCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECC
Confidence 3578888888887653 35566678999999999993 248999999999999999999 89999999999
Q ss_pred CCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEE
Q 014603 142 PGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIA 221 (422)
Q Consensus 142 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 221 (422)
++|+++...++..|.+++.++.++ +++.+|++.+++.+++++++++ |+||||... ++++|.++|+++|+++|+
T Consensus 84 ~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~l~~~~~~v~---~~n~~G~~~---~l~~i~~l~~~~~~~li~ 156 (373)
T 3frk_A 84 NTFIATALAVSYTGAKPIFVEPDI-RTYNIDPSLIESAITEKTKAII---AVHLYGQPA---DMDEIKRIAKKYNLKLIE 156 (373)
T ss_dssp TSCTHHHHHHHHHSCEEEEECEET-TTTEECGGGTGGGCCTTEEEEE---EECCTTCCC---CHHHHHHHHHHHTCEEEE
T ss_pred CCcHHHHHHHHHcCCEEEEEeccc-cccCcCHHHHHHhcCCCCeEEE---EECCCcCcc---cHHHHHHHHHHcCCEEEE
Confidence 999999999999999999998864 3567899999999988888776 778999984 577889999999999999
Q ss_pred cccccccc-cCCCCCCCccccCCCCCeEEEecCc--cccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhhhc------
Q 014603 222 DEVYDHLA-FGNTPFVPMGVFGSIVPVLTLGSIS--KRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNIS------ 292 (422)
Q Consensus 222 D~~~~~~~-~~~~~~~~~~~~~~~~~~i~i~s~s--K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 292 (422)
|++|+... +++. .+..+ .+ +++.||+ |.++++|. .|++++++ +++.+++.......
T Consensus 157 D~a~~~g~~~~~~---~~~~~-~d---~~~~S~~~~K~l~~~g~-gg~~~~~~-------~~~~~~~~~~~~~g~~~~~~ 221 (373)
T 3frk_A 157 DAAQAHGSLYKGM---KVGSL-GD---AAGFSFYPAKNLGSLGD-GGAVVTND-------KDLAEKIKALSNYGSEKKYH 221 (373)
T ss_dssp ECTTCTTCEETTE---ETTSS-SS---EEEEECCTTSSSCCSSS-CEEEEESC-------HHHHHHHHHHHBTTCSBTTB
T ss_pred ECCcccCCEECCE---ecccc-cc---EEEEeCcCCCccCccce-eEEEEeCC-------HHHHHHHHHHHhcCcccCCc
Confidence 99998532 2221 11111 12 7788877 98654353 68888754 45666665543211
Q ss_pred -------cCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccccCCCC
Q 014603 293 -------SDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINS 365 (422)
Q Consensus 293 -------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 365 (422)
...+.+..++....+ ..+++..++.+++.+.+.+.|++++ +.+...+......|..++... .+
T Consensus 222 ~~~~g~~~~~~~~~aa~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~----~~ 291 (373)
T 3frk_A 222 HIYKGFNSRLDELQAGFLRVKL-----KYLDKWNEERRKIAQKYIAGINNPN-VIIPVEADYAKHVWYTFVIRS----EK 291 (373)
T ss_dssp CCSCCCBCCCCHHHHHHHHHHH-----HTHHHHHHHHHHHHHHHHHHCCCTT-EECCCCCTTEECCCSSEEEEE----SS
T ss_pred cccccccCCCCHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhccCc-eEeccCCCCCceeeEEEEEEe----CC
Confidence 112333333322222 3356677788888889999998885 553322222222221111100 14
Q ss_pred HHHHHHHHHHhcCeEEecCCCCCC-----------------------CCeEEEEec--cChHHHHHHHHHHHHHHHH
Q 014603 366 DMEFALKLAKEESVIVLPGITVGL-----------------------KDWLRITFA--VEPSALEDGLGRMKAFYDR 417 (422)
Q Consensus 366 ~~~~~~~l~~~~gi~v~~g~~~~~-----------------------~~~iRis~~--~~~~~l~~~~~~l~~~~~~ 417 (422)
..++...| .++||.+.++..... .+.+|++++ ++++|++++++.|++...+
T Consensus 292 ~~~l~~~L-~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~~di~~~~~~l~~~~~~ 367 (373)
T 3frk_A 292 RDELQKYL-NNNGIGTLIHYPIPIHLQQAYKDLGFKTGNFPIAEKIANEILSIPIWYGMKNEEIEYVIDKINAWKLE 367 (373)
T ss_dssp HHHHHHHH-HHTTBCCBCSCSSCGGGSGGGGGGCCCTTSSHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTCC--
T ss_pred HHHHHHHH-HHCCCCcccCcCCccccChHHHhcCCCCCCCHHHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHhhh
Confidence 55666665 556999987652110 167999997 7899999999999887554
No 187
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.96 E-value=4.8e-27 Score=222.38 Aligned_cols=285 Identities=18% Similarity=0.203 Sum_probs=201.7
Q ss_pred CCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHH----HHhhCCCeEEEee
Q 014603 87 VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEA----RATHSHLEVRHFD 162 (422)
Q Consensus 87 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~----~~~~~g~~~~~~~ 162 (422)
.+..+++++++++++ .+ +.+++ ++|++|++.+++++.++||+|+++.|+|++... .++..|.+++.++
T Consensus 52 ~~~~~l~~~la~~~~------~~-~~i~~-~sGt~a~~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 123 (386)
T 1cs1_A 52 PTRDVVQRALAELEG------GA-GAVLT-NTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVD 123 (386)
T ss_dssp HHHHHHHHHHHHHHT------CS-EEEEE-SSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHHHTTTSCEEEEEC
T ss_pred ccHHHHHHHHHHHhC------CC-cEEEe-CCHHHHHHHHHHHHhCCCCEEEEecCCcHhHHHHHHHHHHhcCCEEEEeC
Confidence 456899999999994 23 45555 555999999999999999999999999987443 3466788888776
Q ss_pred ccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccC
Q 014603 163 LLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG 242 (422)
Q Consensus 163 ~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~ 242 (422)
. .|++.+++.++++++++++++|+||||.+++ +++|.++|+++|+++|+|++|+.+.+. .++ ..
T Consensus 124 ~-------~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~----~~~-~~- 187 (386)
T 1cs1_A 124 Q-------GDEQALRAALAEKPKLVLVESPSNPLLRVVD---IAKICHLAREVGAVSVVDNTFLSPALQ----NPL-AL- 187 (386)
T ss_dssp T-------TCHHHHHHHHHTCCSEEEEECSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTC----CGG-GG-
T ss_pred C-------CCHHHHHHhhccCCcEEEEeCCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccC----Ccc-cc-
Confidence 4 2789999998888999999999999999974 788899999999999999999875532 122 22
Q ss_pred CCCCeEEEecCccccCCCCcee-EEEEeeCCCCcccchhHHHHHHhhhhh-ccCcchHHHHHHHHHHhhchHHHHHHHHH
Q 014603 243 SIVPVLTLGSISKRWIVPGWRL-GWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQGAVPQILEKTEEEFFSKITD 320 (422)
Q Consensus 243 ~~~~~i~i~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 320 (422)
+..+++.|+||+++++|.|+ ||+++++ +++.+.+...... +++.+++.++++...++. +....+
T Consensus 188 --~~di~~~s~sK~~~~~~~~~~G~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~ 253 (386)
T 1cs1_A 188 --GADLVLHSCTKYLNGHSDVVAGVVIAKD-------PDVVTELAWWANNIGVTGGAFDSYLLLRGLRT-----LVPRME 253 (386)
T ss_dssp --TCSEEEEETTTTTTCSSCCCCEEEEESS-------HHHHHHHHHHHHHHTCBCCHHHHHHHHHHHTT-----HHHHHH
T ss_pred --CceEEEEcCcccccCCCCceeEEEEeCc-------HHHHHHHHHHHHhcCCCCCHHHHHHHHhcccH-----HHHHHH
Confidence 23489999999999899887 9999863 3577777665543 345677777776666653 445556
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCC----------------CCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecC
Q 014603 321 ILRETADICCDRLKEIPCITCPKKP----------------EGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPG 384 (422)
Q Consensus 321 ~~~~~~~~l~~~L~~~~~~~~~~~~----------------~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g 384 (422)
.+.++.+.+.+.|++++.+.....+ ..+.++.+.++. ...++ ..++++.||.+.+.
T Consensus 254 ~~~~~~~~l~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~-~~~l~~~gi~~~~~ 325 (386)
T 1cs1_A 254 LAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDG-------DEQTL-RRFLGGLSLFTLAE 325 (386)
T ss_dssp HHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESS-------CHHHH-HHHHHTCSSSEEBS
T ss_pred HHHHHHHHHHHHHhcCCCeEEEECCCCCCCccHHHHHHhcCCCceEEEEEECC-------CHHHH-HHHHHhCCcceEcc
Confidence 6677777788888776443211011 124565666642 23333 44557789988742
Q ss_pred CC---------------C----------CC-CCeEEEEeccChHHHHHHHHHHHHHHHHhc
Q 014603 385 IT---------------V----------GL-KDWLRITFAVEPSALEDGLGRMKAFYDRHA 419 (422)
Q Consensus 385 ~~---------------~----------~~-~~~iRis~~~~~~~l~~~~~~l~~~~~~~~ 419 (422)
.. + +. ++++|++++. ++.++.++++.+++++..
T Consensus 326 ~~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~--~~~~~~i~~l~~al~~~~ 384 (386)
T 1cs1_A 326 SLGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTGI--EDGEDLIADLENGFRAAN 384 (386)
T ss_dssp CCCSSSCEEEEGGGTTTTTSCHHHHHHHTCCTTEEEEECCS--SCHHHHHHHHHHHHHHHT
T ss_pred cCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEEcc--CCHHHHHHHHHHHHHHhh
Confidence 11 0 11 4799999985 455555566666665543
No 188
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.96 E-value=4.9e-29 Score=242.20 Aligned_cols=330 Identities=15% Similarity=0.130 Sum_probs=211.5
Q ss_pred HHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCC-----C----C
Q 014603 65 SVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARP-----G----A 135 (422)
Q Consensus 65 ~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~-----g----d 135 (422)
+.+.+++.+++..+. ..|.+..+..++|++++++++ .+++++|+||++|++.++.+++++ | |
T Consensus 53 ~~v~~a~~~~l~~~~-~~y~~~~~~~~l~~~la~~~~--------~~~v~~t~~gt~A~~~al~~~~~~~~~~~G~~~~d 123 (467)
T 2oqx_A 53 GAVTQSMQAAMMRGD-EAYSGSRSYYALAESVKNIFG--------YQYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSK 123 (467)
T ss_dssp SCCCHHHHHHTTSCC-CCSSSCHHHHHHHHHHHHHHC--------CSEEEEEC--CCSHHHHHHHHHHHHHHHHCCCTTT
T ss_pred HHHHHHHHHHhccCc-ceeccCchhHHHHHHHHHHhC--------cCcEEEcCCcHHHHHHHHHHHhccccccCCCCccc
Confidence 677888888875532 368777778899999999992 368999999999999999998887 8 9
Q ss_pred EEEecCCCccchHHHHhhCCCeEEEeec----cCC----CCcccCHHHHHHhhc----CCceEEEEeCCCCCc-ccccCH
Q 014603 136 NILLPRPGFPYYEARATHSHLEVRHFDL----LPA----KGWEVDLDAVEALAD----ENTVALVIINPGNPC-GNVYTY 202 (422)
Q Consensus 136 ~Vl~~~~~~~~~~~~~~~~g~~~~~~~~----~~~----~~~~~d~~~l~~~~~----~~~~~i~i~~p~npt-G~~~~~ 202 (422)
+|++..+.|..+.......+..+..... ... .++.+|++.|++.++ ++++++++++|+||+ |.+++.
T Consensus 124 ~Ii~~~~h~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~~~~~~~~vi~~~~~n~~gG~~~~~ 203 (467)
T 2oqx_A 124 MVAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSL 203 (467)
T ss_dssp CEEEESSCCHHHHHHHHHTTCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCCEEEESSBCGGGCBCCCH
T ss_pred eEEecccccccchhhhhccCcceeeccccccccCCCCCCccCCcCHHHHHHHHHhcCCCceeEEEEeccccCCCCccCCH
Confidence 9877743323334444445555443211 111 234679999999886 368899999999998 899999
Q ss_pred HHHHHHHHHHHHcCcEEEEcccccc----------cccCCCCCCCccc--cCCCCCeEEEecCccccCCC-CceeEEEEe
Q 014603 203 QHLQKIAETAKKLGIMVIADEVYDH----------LAFGNTPFVPMGV--FGSIVPVLTLGSISKRWIVP-GWRLGWLVT 269 (422)
Q Consensus 203 ~~l~~i~~~~~~~~~~li~D~~~~~----------~~~~~~~~~~~~~--~~~~~~~i~i~s~sK~~~~~-G~r~G~~~~ 269 (422)
+++++|+++|++||++||+|+++.. ..+.|.....+.. .... + +++.|+||+++++ | ||+++
T Consensus 204 ~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~~~~~~~~~~~~~~-d-~~~~s~sK~~g~~~G---g~~~~ 278 (467)
T 2oqx_A 204 ANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYKYA-D-MLAMSAKKDAMVPMG---GLLCM 278 (467)
T ss_dssp HHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHHHHHHHHGGGC-S-EEEEESSSTTCCSSC---EEEEE
T ss_pred HHHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccCccHHHHhhhhhccC-C-eEEEecccccCCCCc---eEEEe
Confidence 9999999999999999999977643 1233322111110 0111 2 4578999998766 4 77776
Q ss_pred eCCCCcccchhHHHHHHhhhhhc------cCcchHHHHHHHHHHhhchHHHH-HHHHHHHHHHHHHHHHHhhcCCCCCCC
Q 014603 270 SDPNGILQDSGIVDSIKSFLNIS------SDPATFIQGAVPQILEKTEEEFF-SKITDILRETADICCDRLKEIPCITCP 342 (422)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~a~~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~ 342 (422)
++.. + -+...+++...... +..+.....++...++. ++ ++..++..++++.+.+.|+++ ++. +
T Consensus 279 ~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~l~~----~~~~~~~~~~~~~~~~l~~~L~~~-~~~-~ 348 (467)
T 2oqx_A 279 KDDS-F---FDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYD----GMNLDWLAYRIAQVQYLVDGLEEI-GVV-C 348 (467)
T ss_dssp CSGG-G---HHHHHHHHHHHHHTTSSCCCCCCCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHHHHHHT-TCC-E
T ss_pred cChh-H---HHHHHHHHHhhhccCCcccccchhhhHHHHHHHhhHh----hhhHHHHHHHHHHHHHHHHHHHHC-CCe-e
Confidence 5310 0 02334443332111 11121222222222221 12 123445567788888899887 776 4
Q ss_pred CCCCCceEEEEecCc--ccccCCCC-HHHHHHHHHHhcCeEEecCCCC--C-----------CCCeEEEEec---cChHH
Q 014603 343 KKPEGSMFVMVKLNY--SLLEGINS-DMEFALKLAKEESVIVLPGITV--G-----------LKDWLRITFA---VEPSA 403 (422)
Q Consensus 343 ~~~~~g~~~~~~~~~--~~~~~~~~-~~~~~~~l~~~~gi~v~~g~~~--~-----------~~~~iRis~~---~~~~~ 403 (422)
. |.+++++|+.++. .......- ..++...++.++||.+.|+..| + ..+++|++++ +++++
T Consensus 349 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~~t~e~ 427 (467)
T 2oqx_A 349 Q-QAGGHAAFVDAGKLLPHIPADQFPAQALACELYKVAGIRAVEIGSFLLGRDPKTGKQLPCPAELLRLTIPRATYTQTH 427 (467)
T ss_dssp E-EECSSCEEEEHHHHSTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEECCCTTTSCHHH
T ss_pred e-cCCceEEEEechhhcccCCcccccHHHHHHHHHHhcCceecccccccccccccccccccCccCeEEEEecCCCCCHHH
Confidence 3 6678888888742 10000000 3344666647779999985432 1 1379999998 68999
Q ss_pred HHHHHHHHHHHHHHhc
Q 014603 404 LEDGLGRMKAFYDRHA 419 (422)
Q Consensus 404 l~~~~~~l~~~~~~~~ 419 (422)
+++++++|++++++..
T Consensus 428 i~~~~~~l~~~l~~~~ 443 (467)
T 2oqx_A 428 MDFIIEAFKHVKENAA 443 (467)
T ss_dssp HHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHhhhh
Confidence 9999999999987654
No 189
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.96 E-value=9e-28 Score=228.96 Aligned_cols=332 Identities=11% Similarity=0.048 Sum_probs=224.2
Q ss_pred CCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCC------CCCCCHHHH----HHHHHHHhhcCCCCCCCCCE
Q 014603 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYS------STVGILPAR----RAIADYLNRDLPYKLSPDDV 113 (422)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~------~~~g~~~lr----~~ia~~l~~~~~~~~~~~~i 113 (422)
+..+++++.+. +.++.+.+++.+++.+.....|+ ......+++ +++++++ +.+++ .
T Consensus 23 ~~~~~~~~~~~-------~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~~la~~~------g~~~~-~ 88 (405)
T 2vi8_A 23 HAKIELIASEN-------FVSRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLF------GAEHA-N 88 (405)
T ss_dssp HHSEECCTTCC-------CCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHH------TCSEE-E
T ss_pred hcceeeccCcc-------cCCHHHHHHHHHHhhcccccCCCCccccccchHHHHHHHHHHHHHHHHh------CCCce-E
Confidence 34567776554 23799999999987532111222 111234455 4677766 33433 3
Q ss_pred EEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHH-H--HhhCC--CeEEEeeccCCCCcccCHHHHHHhhcC-CceEE
Q 014603 114 YLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEA-R--ATHSH--LEVRHFDLLPAKGWEVDLDAVEALADE-NTVAL 187 (422)
Q Consensus 114 ~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~-~--~~~~g--~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i 187 (422)
+++++|++++..++.+++++||+|+++.|+|+.+.. . +...| ..++.+++++ .++.+|++.+++.+++ +++++
T Consensus 89 i~~~sGt~a~~~a~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~v 167 (405)
T 2vi8_A 89 VQPHSGAQANMAVYFTVLEHGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDP-ETHVIDYDDVREKARLHRPKLI 167 (405)
T ss_dssp CCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCTTTTCTTSHHHHHSEEEEECBCT-TTCSBCHHHHHHHHHHHCCSEE
T ss_pred EEecCcHHHHHHHHHHhcCCCCEEEEecccccchhcccchhhhccceeEEEeccccc-ccCCcCHHHHHHHHHhcCCeEE
Confidence 444455999999999999999999999999987643 1 12333 3666666543 3567899999998875 67777
Q ss_pred EEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEccccccccc-CCCCCCCccccCCCCCeEEEecCccccC-CCCceeE
Q 014603 188 VIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAF-GNTPFVPMGVFGSIVPVLTLGSISKRWI-VPGWRLG 265 (422)
Q Consensus 188 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~-~~~~~~~~~~~~~~~~~i~i~s~sK~~~-~~G~r~G 265 (422)
++ +|+|. |.. .++++|.++|+++|+++|+|++|+.... .+... ..+.. ..++++|+||+++ +.| |
T Consensus 168 ~~-~~~~~-~~~---~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~---~~~~~--~di~~~s~sK~~~g~~g---G 234 (405)
T 2vi8_A 168 VA-AAAAY-PRI---IDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHP---NPVPY--AHFVTTTTHKTLRGPRG---G 234 (405)
T ss_dssp EE-CCSSC-CSC---CCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSC---CSTTT--CSEEEEESSSTTCCCSC---E
T ss_pred EE-eCCCC-Ccc---CCHHHHHHHHHHcCCEEEEEccccccccccCcCC---Ccccc--CCEEEEeccccCCCCCC---e
Confidence 65 55543 444 2488999999999999999999984322 22111 11111 1288999999986 555 9
Q ss_pred EEEeeCCCCcccchhHHHHHHhhhh-h-ccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCC
Q 014603 266 WLVTSDPNGILQDSGIVDSIKSFLN-I-SSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPK 343 (422)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 343 (422)
|++++ +++.+.+..... . .++++...+.++.++++...+.++++..++++++++.+.+.|+++ ++.+.
T Consensus 235 ~~~~~--------~~~~~~l~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~- 304 (405)
T 2vi8_A 235 MILCQ--------EQFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNE-GFTLV- 304 (405)
T ss_dssp EEEEC--------HHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEG-
T ss_pred EEEEc--------HHHHHHHHhhhcccccCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC-CCeEe-
Confidence 99985 467777766542 2 234455555555666764334578889999999999999999988 77633
Q ss_pred CC-CCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCC----CC--CCCeEEEEecc------ChHHHHHHHHH
Q 014603 344 KP-EGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGIT----VG--LKDWLRITFAV------EPSALEDGLGR 410 (422)
Q Consensus 344 ~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~----~~--~~~~iRis~~~------~~~~l~~~~~~ 410 (422)
.| ..++++|+.++... .+..++...+ .++||.+.+|.. ++ ..+++|++++. +++++++++++
T Consensus 305 ~~~~~~~~~~~~~~~~~----~~~~~~~~~l-~~~gi~v~~g~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~ 379 (405)
T 2vi8_A 305 SGGTDNHLLLVDLRPQQ----LTGKTAEKVL-DEVGITVNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGLEEMDEIAAI 379 (405)
T ss_dssp GGSCSSSEEEEECGGGT----CCHHHHHHHH-HHHTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHH
T ss_pred cCCCCceEEEEEccCCC----CCHHHHHHHH-HHcCceeccCcCccccCCCCCCCceEEeeeeeeecCCCHHHHHHHHHH
Confidence 33 45788899886421 1455665555 667999999752 21 25789999983 78999999999
Q ss_pred HHHHHHHh
Q 014603 411 MKAFYDRH 418 (422)
Q Consensus 411 l~~~~~~~ 418 (422)
|++++++.
T Consensus 380 l~~~~~~~ 387 (405)
T 2vi8_A 380 IGLVLKNV 387 (405)
T ss_dssp HHHHHTCT
T ss_pred HHHHHhcc
Confidence 99998664
No 190
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.96 E-value=6.5e-27 Score=221.45 Aligned_cols=281 Identities=18% Similarity=0.168 Sum_probs=200.8
Q ss_pred CCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHH----HhhCCCeEEEee
Q 014603 87 VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEAR----ATHSHLEVRHFD 162 (422)
Q Consensus 87 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~----~~~~g~~~~~~~ 162 (422)
....+++++++++++ . ++.+++++|++|+..++.+++++||+|+++.++|+++... ++..|.+++.++
T Consensus 59 ~~~~~l~~~la~~~g------~--~~~i~~~sG~~ai~~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~ 130 (389)
T 3acz_A 59 PTVEQFEEMVCSIEG------A--AGSAAFGSGMGAISSSTLAFLQKGDHLIAGDTLYGCTVSLFTHWLPRFGIEVDLID 130 (389)
T ss_dssp HHHHHHHHHHHHHHT------C--SEEEEESSHHHHHHHHHTTTCCTTCEEEEESSCCHHHHHHHHHHHHHTTCEEEEEC
T ss_pred hHHHHHHHHHHHHhC------C--CeEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEEC
Confidence 446789999999983 2 2677777888999999999999999999999999976554 577899988887
Q ss_pred ccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccC
Q 014603 163 LLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG 242 (422)
Q Consensus 163 ~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~ 242 (422)
. .|++.+++.++++++++++++|+||+|.+++ +++|.++|+++|+++|+|++|..+.+. .++. ++
T Consensus 131 ~-------~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~~~~~~~~~livD~~~~~~~~~----~~~~-~~ 195 (389)
T 3acz_A 131 T-------SDVEKVKAAWKPNTKMVYLESPANPTCKVSD---IKGIAVVCHERGARLVVDATFTSPCFL----KPLE-LG 195 (389)
T ss_dssp T-------TCHHHHHHTCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTCTTTC----CGGG-TT
T ss_pred C-------CCHHHHHHhcCCCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccccc----Cccc-cC
Confidence 4 3889999999889999999999999999975 788899999999999999999864321 1221 22
Q ss_pred CCCCeEEEecCccccCCCCcee-EEEEeeCCCCcccchhHHHHHHhhhh-hccCcchHHHHHHHHHHhhchHHHHHHHHH
Q 014603 243 SIVPVLTLGSISKRWIVPGWRL-GWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQGAVPQILEKTEEEFFSKITD 320 (422)
Q Consensus 243 ~~~~~i~i~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 320 (422)
..+++.|+||.++++|.|+ ||+++++ +++++++..... ...+.++..++++...++. +..+.+
T Consensus 196 ---~di~~~S~sK~~~~~~~~~~G~v~~~~-------~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~-----l~~r~~ 260 (389)
T 3acz_A 196 ---ADIALHSVSKYINGHGDVIGGVSSAKT-------AEDIATIKFYRKDAGSLMAPMDAFLCARGMKT-----LPIRMQ 260 (389)
T ss_dssp ---CSEEEEETTTTTTCSSCCCCEEEEESS-------HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT-----HHHHHH
T ss_pred ---CeEEEECChhhccCCCCceeEEEEECc-------HHHHHHHHHHHHhcCCCCCHHHHHHHHcCccH-----HHHHHH
Confidence 3489999999999999998 9999862 267777766553 3345666777777777764 333344
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCC----------------CCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEec-
Q 014603 321 ILRETADICCDRLKEIPCITCPKK----------------PEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLP- 383 (422)
Q Consensus 321 ~~~~~~~~l~~~L~~~~~~~~~~~----------------~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~- 383 (422)
+..++.+.+.+.|++++.+..+.. ...+.++.+.++ . .+....++++.|+.+.+
T Consensus 261 ~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~~~~~~~~~~~~g~g~~~~~~l~--------~-~~~~~~~l~~~~i~~~~~ 331 (389)
T 3acz_A 261 IHMENGLKVAKFLEQHEKIVKVNHPGLESFPGHDIAKKQMTGYGSTFLFEMK--------S-FEAAKKLMEHLKVCTLAV 331 (389)
T ss_dssp HHHHHHHHHHHHHHHCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEES--------S-HHHHHHHHTTCSSSEEBS
T ss_pred HHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCeEEEEEEC--------C-HHHHHHHHHhCCCcEECc
Confidence 455566666666665432110000 112445666664 2 23345566778888776
Q ss_pred --C------CCC----------------CC-CCeEEEEeccChHHHHHHHHHHHHHHH
Q 014603 384 --G------ITV----------------GL-KDWLRITFAVEPSALEDGLGRMKAFYD 416 (422)
Q Consensus 384 --g------~~~----------------~~-~~~iRis~~~~~~~l~~~~~~l~~~~~ 416 (422)
| ..| +. ++++|+|++.. +.+++++.|.++++
T Consensus 332 s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRlsvg~~--~~~~li~~l~~al~ 387 (389)
T 3acz_A 332 SLGCVDTLIEHPASMTHAAVPENIMRKQGITPELVRISVGIE--NVDDIIADLKQALE 387 (389)
T ss_dssp CCCCSSCEEECTTTTTTSSSCHHHHHHHTCCTTEEEEECCSS--CHHHHHHHHHHHHT
T ss_pred CCCCcccEeeCCcccccccCCHHHHHhcCCCcCeEEEEeccC--CHHHHHHHHHHHHh
Confidence 3 222 11 47999999853 66777777777764
No 191
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.96 E-value=6.3e-27 Score=221.62 Aligned_cols=284 Identities=20% Similarity=0.167 Sum_probs=205.7
Q ss_pred CCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHH----hhCCCeEEEee
Q 014603 87 VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARA----THSHLEVRHFD 162 (422)
Q Consensus 87 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~----~~~g~~~~~~~ 162 (422)
....++++.++++++ .+++++++||++|++.++.+++++||+|+++.++|+++...+ ...|.+++.++
T Consensus 66 ~~~~~l~~~la~~~g--------~~~~~~~~sGt~A~~~al~~~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~ 137 (392)
T 3qhx_A 66 PTRTALEAALAAVED--------AAFGRAFSSGMAAADCALRAMLRPGDHVVIPDDAYGGTFRLIDKVFTGWNVEYTPVA 137 (392)
T ss_dssp HHHHHHHHHHHHHTT--------CSEEEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTGGGGTCEEEEEC
T ss_pred hHHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHHHHhcCcEEEEeC
Confidence 346788889998873 247899999999999999999999999999999998776555 56788888876
Q ss_pred ccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccC
Q 014603 163 LLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG 242 (422)
Q Consensus 163 ~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~ 242 (422)
.+ |++.+++.++++++++++++|+||+|.+.+ +++|.++|+++|+++|+|++|+.... . .+ ..++
T Consensus 138 ~~-------d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~g~~li~D~~~~~~~~-~---~~-~~~~ 202 (392)
T 3qhx_A 138 LA-------DLDAVRAAIRPTTRLIWVETPTNPLLSIAD---IAGIAQLGADSSAKVLVDNTFASPAL-Q---QP-LSLG 202 (392)
T ss_dssp TT-------CHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTCTTT-C---CG-GGGT
T ss_pred CC-------CHHHHHHhhCCCCeEEEEECCCCCCcEEec---HHHHHHHHHHcCCEEEEECCCccccc-C---Ch-HHhC
Confidence 52 889999999999999999999999999964 88899999999999999999975321 1 11 1233
Q ss_pred CCCCeEEEecCccccCCCC-ceeEEEEeeCCCCcccchhHHHHHHhhhh-hccCcchHHHHHHHHHHhhchHHHHHHHHH
Q 014603 243 SIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQGAVPQILEKTEEEFFSKITD 320 (422)
Q Consensus 243 ~~~~~i~i~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 320 (422)
. .+++.|+||.++++| +++|+++.++ +++.+.+..... ....++++.++++...++. +..+.+
T Consensus 203 ~---di~~~S~sK~lg~~g~~~~G~v~~~~-------~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~-----l~~~~~ 267 (392)
T 3qhx_A 203 A---DVVLHSTTKYIGGHSDVVGGALVTND-------EELDQSFAFLQNGAGAVPGPFDAYLTMRGLKT-----LVLRMQ 267 (392)
T ss_dssp C---SEEEEETTTTTTCSSCCCCEEEEESC-------HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT-----HHHHHH
T ss_pred C---cEEEEcCccccCCCCCceEEEEEECc-------HHHHHHHHHHHHhcCCCCCHHHHHHHHhhhhH-----HHHHHH
Confidence 3 388999999998877 7999999864 467777766554 3456677888877777765 445566
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCC----------------CceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecC
Q 014603 321 ILRETADICCDRLKEIPCITCPKKPE----------------GSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPG 384 (422)
Q Consensus 321 ~~~~~~~~l~~~L~~~~~~~~~~~~~----------------~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g 384 (422)
+..++.+.+.+.|+++|.+..+..|. .|.++++.++... .....+... ++..++.+..|
T Consensus 268 ~~~~~~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~~~~l~~~~----~~~~~~~~~-l~~~~~~~s~G 342 (392)
T 3qhx_A 268 RHSENAAAVAEFLAEHPAISTVLYPGLPSHPGHAVAARQMRGFGGMVSVRMRAGR----TAAEQLCAK-TNIFILAESLG 342 (392)
T ss_dssp HHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTCH----HHHHHHHHH-CSSSEECSCCC
T ss_pred HHHHHHHHHHHHHhcCCCcceEECCCCCCCCCHHHHHHhCCCCceEEEEEeCCcH----HHHHHHHHh-CCCceECCCCC
Confidence 77788888888888876653222221 2557788886410 023334333 35557777666
Q ss_pred CCCC--------------------CCCeEEEEeccChHHHHHHHHHHHHHH
Q 014603 385 ITVG--------------------LKDWLRITFAVEPSALEDGLGRMKAFY 415 (422)
Q Consensus 385 ~~~~--------------------~~~~iRis~~~~~~~l~~~~~~l~~~~ 415 (422)
+.+. .++.||+|++. ++.++.++.|.+++
T Consensus 343 ~~~sl~~~~~~~~~~~~~~~~~g~~~~~iRlSvg~--e~~~~~i~~l~~al 391 (392)
T 3qhx_A 343 SVESLIEHPSAMTHASTAGSQLEVPDDLVRLSVGI--EDVADLLDDLKQAL 391 (392)
T ss_dssp CSSCEEECGGGTSCGGGBTTBCCCCTTEEEEECCS--SCHHHHHHHHHHHH
T ss_pred CCCceeeCcccccccccCHHHcCCCCCeEEEEecc--CCHHHHHHHHHHHh
Confidence 6432 14679999984 34445555555544
No 192
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.96 E-value=3e-27 Score=219.15 Aligned_cols=277 Identities=15% Similarity=0.095 Sum_probs=193.2
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHH----hhCCCeEEEeeccCC
Q 014603 91 PARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARA----THSHLEVRHFDLLPA 166 (422)
Q Consensus 91 ~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~----~~~g~~~~~~~~~~~ 166 (422)
++|+.++++++ .+ +.+++++|++|++.++.++.++||+|+++.|+|+++...+ ...|.+++.++.
T Consensus 2 ~l~~~la~~~g------~~--~~i~~~sG~~a~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--- 70 (331)
T 1pff_A 2 ALEGKIAKLEH------AE--ACAATASGMGAIAASVWTFLKAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFIDM--- 70 (331)
T ss_dssp HHHHHHHHHHT------CS--EEEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECT---
T ss_pred hHHHHHHHHhC------CC--eEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCcchHHHHHHHHHHhcCCEEEEeCC---
Confidence 68999999983 33 4555556699999999999999999999999999876554 457888887764
Q ss_pred CCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHH-cCcEEEEcccccccccCCCCCCCccccCCCC
Q 014603 167 KGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKK-LGIMVIADEVYDHLAFGNTPFVPMGVFGSIV 245 (422)
Q Consensus 167 ~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~-~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~ 245 (422)
.|++.+++.++++++++++++|+||||.+++ +++|.++|++ +|+++|+|++|+.+.+. .++ .. +
T Consensus 71 ----~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---~~~i~~~~~~~~~~~li~D~a~~~~~~~----~~~-~~---~ 135 (331)
T 1pff_A 71 ----AVPGNIEKHLKPNTRIVYFETPANPTLKVID---IEDAVKQARKQKDILVIVDNTFASPILT----NPL-DL---G 135 (331)
T ss_dssp ----TSTTHHHHTCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHTTSSSCEEEEECTTTHHHHC----CGG-GG---T
T ss_pred ----CCHHHHHHhhcCCCeEEEEECCCCCcCcccC---HHHHHHHHhhhcCCEEEEECCCcccccC----Chh-hc---C
Confidence 3778999999888999999999999999975 8888999999 99999999999864432 122 22 2
Q ss_pred CeEEEecCccccCCCCce-eEEEEeeCCCCcccchhHHHHHHhhhhh--ccCcchHHHHHHHHHHhhchHHHHHHHHHHH
Q 014603 246 PVLTLGSISKRWIVPGWR-LGWLVTSDPNGILQDSGIVDSIKSFLNI--SSDPATFIQGAVPQILEKTEEEFFSKITDIL 322 (422)
Q Consensus 246 ~~i~i~s~sK~~~~~G~r-~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~ 322 (422)
..+++.|+||.++++|.| +||+++++ +++.+++...... ..+++++.++++...++. +....+..
T Consensus 136 ~d~~~~s~~K~~~~~~~r~~G~~~~~~-------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~ 203 (331)
T 1pff_A 136 VDIVVHSATKYINGHTDVVAGLVCSRA-------DIIAKVKSQGIKDITGAIISPHDAWLITRGTLT-----LDMRVKRA 203 (331)
T ss_dssp CSEEEEETTTTTSSSSSCCCEEEEECH-------HHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHHH-----HHHHHHHH
T ss_pred CcEEEEECccccCCCCCceEEEEEeCc-------HHHHHHHHHHHHhhcCCCCCHHHHHHHHcCcch-----HHHHHHHH
Confidence 459999999999999999 79999862 2677777765543 346677777776666653 22223333
Q ss_pred HHHHHHHHHHhhcC--------------CCCCCCC--CCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCC-
Q 014603 323 RETADICCDRLKEI--------------PCITCPK--KPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGI- 385 (422)
Q Consensus 323 ~~~~~~l~~~L~~~--------------~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~- 385 (422)
.++.+.+.+.|++. |++.+.. ....+.++.+.++ +..++ ..+++++||.+.+.+
T Consensus 204 ~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~-~~~l~~~gI~~~~~s~ 274 (331)
T 1pff_A 204 AENAQKVAEFLHEHKAVKKVYYPGLPDHPGHEIAKKQMKMFGSMIAFDVD--------GLEKA-KKVLDNCHVVSLAVSL 274 (331)
T ss_dssp HHHHHHHHHHHHHCTTCCCEECTTSTTSTTHHHHHHHCSSCCSEEEEECS--------SHHHH-HHHHHTCSSSEECSSC
T ss_pred HHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEC--------CHHHH-HHHHHhCCCceeccCC
Confidence 34444444444332 2221100 0113446666664 23344 455677899876542
Q ss_pred --------C----------------CCC-CCeEEEEec--cChHHHHHHHHHHHHH
Q 014603 386 --------T----------------VGL-KDWLRITFA--VEPSALEDGLGRMKAF 414 (422)
Q Consensus 386 --------~----------------~~~-~~~iRis~~--~~~~~l~~~~~~l~~~ 414 (422)
. ++. ++++|+|++ +++++++.+++.|+++
T Consensus 275 g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~~~t~~~i~~l~~~l~~~ 330 (331)
T 1pff_A 275 GGPESLIQHPASMTHAGVPKEEREAAGLTDNLIRLSVGCENVQDIIDDLKQALDLV 330 (331)
T ss_dssp CSSSCEEECHHHHTSTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHTC
T ss_pred CCcceeeecchhhcccccCHHHHHhcCCCCCeEEEEEecCCHHHHHHHHHHHHHHh
Confidence 1 122 579999998 5678888888877653
No 193
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.96 E-value=5.4e-28 Score=227.39 Aligned_cols=305 Identities=16% Similarity=0.180 Sum_probs=220.4
Q ss_pred CCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHh-cCCCCEEEec
Q 014603 62 RTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVL-ARPGANILLP 140 (422)
Q Consensus 62 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l-~~~gd~Vl~~ 140 (422)
+.++++.+++.+.+... .|.+..+..++|+.++++++ .+++++++||++|++.++.++ +++||+|+++
T Consensus 13 ~~~~~v~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~~--------~~~~~~~~sGt~al~~al~~~~~~~gd~Vi~~ 81 (367)
T 3nyt_A 13 RIKDKIDAGIQRVLRHG---QYILGPEVTELEDRLADFVG--------AKYCISCANGTDALQIVQMALGVGPGDEVITP 81 (367)
T ss_dssp HHHHHHHHHHHHHHHHC---CCSSCHHHHHHHHHHHHHHT--------CSEEEEESCHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred ccCHHHHHHHHHHHhcC---CccCChHHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHhCCCCcCEEEEC
Confidence 34678888888887653 35555678999999999993 248999999999999999999 8999999999
Q ss_pred CCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEE
Q 014603 141 RPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVI 220 (422)
Q Consensus 141 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li 220 (422)
.++|+++...+...|.+++.++++++ .+.+|++.+++.+++++++++ |+||+|.. .++++|.++|+++|+++|
T Consensus 82 ~~~~~~~~~~~~~~G~~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~v~---~~~~~G~~---~~~~~i~~la~~~~~~li 154 (367)
T 3nyt_A 82 GFTYVATAETVALLGAKPVYVDIDPR-TYNLDPQLLEAAITPRTKAII---PVSLYGQC---ADFDAINAIASKYGIPVI 154 (367)
T ss_dssp SSSCTHHHHHHHHTTCEEEEECBCTT-TCSBCGGGTGGGCCTTEEEEC---CBCGGGCC---CCHHHHHHHHHHTTCCBE
T ss_pred CCccHHHHHHHHHcCCEEEEEecCCc-cCCcCHHHHHHhcCcCCcEEE---eeCCccCh---hhHHHHHHHHHHcCCEEE
Confidence 99999999999999999999998653 467899999999988887766 88899977 468888999999999999
Q ss_pred Eccccccc-ccCCCCCCCccccCCCCCeEEEecC--ccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhhh------
Q 014603 221 ADEVYDHL-AFGNTPFVPMGVFGSIVPVLTLGSI--SKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI------ 291 (422)
Q Consensus 221 ~D~~~~~~-~~~~~~~~~~~~~~~~~~~i~i~s~--sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~------ 291 (422)
+|++|+.. .+.+.. +..++ .+++.|| +|.++++|. .|++++++ +++.+++......
T Consensus 155 ~D~a~~~g~~~~~~~---~~~~~----di~~~Sf~~~K~l~~~g~-gg~~~~~~-------~~l~~~~~~~~~~g~~~~~ 219 (367)
T 3nyt_A 155 EDAAQSFGASYKGKR---SCNLS----TVACTSFFPSAPLGCYGD-GGAIFTND-------DELATAIRQIARHGQDRRY 219 (367)
T ss_dssp EECTTTTTCEETTEE---TTSSS----SEEEEECCTTSSSCCSSC-CEEEEESC-------HHHHHHHHHHTBTTEEETT
T ss_pred EECccccCCeECCee---ccCCC----CEEEEECCCCCcCCCcCc-eeEEEeCC-------HHHHHHHHHHHhcCCCcCc
Confidence 99999752 233321 12222 2788886 899877676 78888854 5677777654321
Q ss_pred -------ccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCc----eEEEEecCcccc
Q 014603 292 -------SSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGS----MFVMVKLNYSLL 360 (422)
Q Consensus 292 -------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g----~~~~~~~~~~~~ 360 (422)
+...+.+.++++...++. +++..++.+++.+.+.+.|+++ ++.+...+..+ ..+.+.++
T Consensus 220 ~~~~~g~~~~~~~~~aa~~~~~l~~-----~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~~~~~~~~~~~~~~~~~---- 289 (367)
T 3nyt_A 220 HHIRVGVNSRLDTLQAAILLPKLEI-----FEEEIALRQKVAAEYDLSLKQV-GIGTPFIEVNNISVYAQYTVRMD---- 289 (367)
T ss_dssp EECSCCCBCCCCHHHHHHHHHHHHT-----HHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCTTEECCCSSEEEECS----
T ss_pred eeeccCcCCCccHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHhccC-CeeccCCCCCCceeeEEEEEEeC----
Confidence 233455555555555543 4556667777888888888887 44422222221 12233332
Q ss_pred cCCCCHHHHHHHHHHhcCeEEecCCCC--------C-C-----------CCeEEEEec--cChHHHHHHHHHHHHH
Q 014603 361 EGINSDMEFALKLAKEESVIVLPGITV--------G-L-----------KDWLRITFA--VEPSALEDGLGRMKAF 414 (422)
Q Consensus 361 ~~~~~~~~~~~~l~~~~gi~v~~g~~~--------~-~-----------~~~iRis~~--~~~~~l~~~~~~l~~~ 414 (422)
+..++...| +++||.+.++... . . ...+|+++. .+++|++++++.|++.
T Consensus 290 ----~~~~l~~~L-~~~GI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lp~~~~~t~~~i~~v~~~~~~~ 360 (367)
T 3nyt_A 290 ----NRESVQASL-KAAGVPTAVHYPIPLNKQPAVADEKAKLPVGDKAATQVMSLPMHPYLDTASIKIICAALTNL 360 (367)
T ss_dssp ----SHHHHHHHH-HHHTCCCBCSCSSCGGGSGGGCCTTCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHC-
T ss_pred ----CHHHHHHHH-HHCCCceeccCCCccccChhhhccCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHH
Confidence 355565655 5669998876531 0 0 356899887 7899999999988753
No 194
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.96 E-value=1e-26 Score=222.08 Aligned_cols=284 Identities=15% Similarity=0.104 Sum_probs=202.2
Q ss_pred CCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHH----HhhCCCeEEEeec
Q 014603 88 GILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEAR----ATHSHLEVRHFDL 163 (422)
Q Consensus 88 g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~----~~~~g~~~~~~~~ 163 (422)
...++|++++++++ .+ ..+++++|++|++.++.+++++||+|+++.++|+++... ++..|.+++.++.
T Consensus 115 ~~~~l~~~lA~l~g------~~--~~v~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~ 186 (445)
T 1qgn_A 115 TTVVLEEKISALEG------AE--STLLMASGMCASTVMLLALVPAGGHIVTTTDCYRKTRIFIETILPKMGITATVIDP 186 (445)
T ss_dssp HHHHHHHHHHHHHT------CS--EEEEESCHHHHHHHHHHHHSCSSCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECS
T ss_pred HHHHHHHHHHHHhC------CC--cEEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCC
Confidence 45689999999883 22 445555556999999999999999999999999876653 5567888888764
Q ss_pred cCCCCcccCHHHHHHhhcCCc-eEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccC
Q 014603 164 LPAKGWEVDLDAVEALADENT-VALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG 242 (422)
Q Consensus 164 ~~~~~~~~d~~~l~~~~~~~~-~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~ 242 (422)
+ |++.|++.+++++ +++++++|+||+|.+.+ +++|.++|+++|+++|+|++|..... ..+ ..++
T Consensus 187 ~-------d~~~l~~ai~~~tv~lV~le~p~NptG~v~d---l~~I~~la~~~g~~livD~a~~~~~~----~~~-~~~g 251 (445)
T 1qgn_A 187 A-------DVGALELALNQKKVNLFFTESPTNPFLRCVD---IELVSKLCHEKGALVCIDGTFATPLN----QKA-LALG 251 (445)
T ss_dssp S-------CHHHHHHHHHHSCEEEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTT----CCT-TTTT
T ss_pred C-------CHHHHHHHhccCCCCEEEEeCCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCccccc----CCc-cccC
Confidence 2 7899999998888 99999999999999965 77889999999999999999975321 111 1233
Q ss_pred CCCCeEEEecCccccCCCC-ceeEEEEeeCCCCcccchhHHHHHHhhhhhc-cCcchHHHHHHHHHHhhchHHHHHHHHH
Q 014603 243 SIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKSFLNIS-SDPATFIQGAVPQILEKTEEEFFSKITD 320 (422)
Q Consensus 243 ~~~~~i~i~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 320 (422)
. .+++.|+||.+++.| .++|+++++ +++++++....... ...+++..+++...++. +..+.+
T Consensus 252 ~---Div~~S~sK~~gg~gd~~~G~l~~~--------~~l~~~l~~~~~~~g~~~~~~~a~~~~~~l~~-----l~~r~~ 315 (445)
T 1qgn_A 252 A---DLVLHSATKFLGGHNDVLAGCISGP--------LKLVSEIRNLHHILGGALNPNAAYLIIRGMKT-----LHLRVQ 315 (445)
T ss_dssp C---SEEEECTTTTTTCSSSCCCEEEEEC--------HHHHHHHHHHHHHHCCCCCHHHHHHHHHHGGG-----HHHHHH
T ss_pred C---EEEEECCcccccccccceEEEEEEC--------HHHHHHHHHHHHHhCCCCCHHHHHHHHHhHHH-----HHHHHH
Confidence 3 388999999987665 579999985 46777776655433 34556666666566654 444556
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCC----------------CCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecC
Q 014603 321 ILRETADICCDRLKEIPCITCPKKP----------------EGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPG 384 (422)
Q Consensus 321 ~~~~~~~~l~~~L~~~~~~~~~~~~----------------~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g 384 (422)
+..++++.+.+.|+++|++..+..| ..+.++++.++... .+...++.. ++..++.+..|
T Consensus 316 ~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~g~ivsf~l~~~~----~~~~~~l~~-l~~~~i~~s~G 390 (445)
T 1qgn_A 316 QQNSTALRMAEILEAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVDGDL----LTTAKFVDA-LKIPYIAPSFG 390 (445)
T ss_dssp HHHHHHHHHHHHHHTCTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEESSCH----HHHHHHHHH-CSSSEECSCCC
T ss_pred HHHHHHHHHHHHHhcCCCceEEECCCCCCCchHHHHHHhccCCCcEEEEEECCCH----HHHHHHHHh-CCCceEeccCC
Confidence 6667788888999988776212233 13567777775310 012233333 23336776666
Q ss_pred CCCC----------------------C-CCeEEEEeccChHHHHHHHHHHHHHHHH
Q 014603 385 ITVG----------------------L-KDWLRITFAVEPSALEDGLGRMKAFYDR 417 (422)
Q Consensus 385 ~~~~----------------------~-~~~iRis~~~~~~~l~~~~~~l~~~~~~ 417 (422)
..+. . ++.||+|++. |+++.+++.|+++++.
T Consensus 391 ~~~sl~~~p~~~~h~~~~~~~~~~~g~~~~~iRlSvG~--Edid~li~~L~~al~~ 444 (445)
T 1qgn_A 391 GCESIVDQPAIMSYWDLSQSDRAKYGIMDNLVRFSFGV--EDFDDLKADILQALDS 444 (445)
T ss_dssp SSSCEEECHHHHHSTTSCHHHHHTTTCCSSEEEEECCS--SCHHHHHHHHHHHHHH
T ss_pred CCceeeecccccccccCCHHHHHhcCCCCCeEEEEecc--CCHHHHHHHHHHHHhh
Confidence 6542 2 4789999994 5799999999998864
No 195
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.96 E-value=8.2e-27 Score=220.16 Aligned_cols=296 Identities=13% Similarity=0.134 Sum_probs=211.1
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchH--HHHhhCCC--eEEEeeccC
Q 014603 90 LPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYE--ARATHSHL--EVRHFDLLP 165 (422)
Q Consensus 90 ~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~--~~~~~~g~--~~~~~~~~~ 165 (422)
.++++.+++++ +.+ +.+++++|+|+|+++++..+ .+||+|++++++|++.. ..++..|. +++.++.+.
T Consensus 38 ~~~~~~l~~~~------~~~-~~v~~~~sgt~a~~~~~~~~-~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 109 (379)
T 3ke3_A 38 NDLLSNLKTVY------NAE-AAVIIPGSGTYGMEAVARQL-TIDEDCLIIRNGWFSYRWTQILEKGKFAKSSTVLTAER 109 (379)
T ss_dssp HHHHHHHHHHH------TCS-EEEEEESCHHHHHHHHHHHH-CTTCEEEEEECSHHHHHHHHHHHHHCCSSEEEEEECEE
T ss_pred HHHHHHHHHHh------CCC-CEEEEcCChhHHHHHHHHhC-CCCCeEEEEeCCchhHHHHHHHHHhCCCCceEEEeccc
Confidence 45556666666 233 68899999999999988655 68999999999998753 34445553 666666532
Q ss_pred C------CC-cccCHHHHHHhhc-CCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCC
Q 014603 166 A------KG-WEVDLDAVEALAD-ENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVP 237 (422)
Q Consensus 166 ~------~~-~~~d~~~l~~~~~-~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~ 237 (422)
. .. ..+|++.+++.+. ++++++++++++|++|.+++.+++++|.++|+++|+++|+|++++ . + ....
T Consensus 110 ~g~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~~-g---~-~~~~ 184 (379)
T 3ke3_A 110 TEDTEAPKPFAPVDIETAVAKIKEDKSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIAS-G---C-VWLD 184 (379)
T ss_dssp SSCCSSCCCEECCCHHHHHHHHHHHTCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTTC-T---T-CCCC
T ss_pred cccccccCCCCCCCHHHHHHHHhhcCCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEeccc-C---C-cccc
Confidence 1 11 2479999999885 478889999999999999999999999999999999999999986 2 2 2223
Q ss_pred ccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhh-------------------h----hccC
Q 014603 238 MGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL-------------------N----ISSD 294 (422)
Q Consensus 238 ~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-------------------~----~~~~ 294 (422)
+..++.+ +++.|++|+++++ .++|+++++ +++.+++.... . +.++
T Consensus 185 ~~~~~~d---~~~~s~~K~l~~~-~g~g~~~~~--------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~t 252 (379)
T 3ke3_A 185 MKELGID---VLISAPQKGWSST-PCAGLVMLS--------AAAIKKVESTESNCFSLDLKQWLTIMRAYENGGHAYHAT 252 (379)
T ss_dssp HHHHTCS---EEEECTTTTTCSC-CCEEEEEEC--------HHHHHHHHTCCCSCSTTCHHHHHHHHHHHHTTSCCCSSC
T ss_pred ccccCCC---EEEecchhhcCCC-CceEEEEEC--------HHHHHhhhcCCCCceeecHHHHHHHHHhhhccCCCCCCC
Confidence 3333433 8888999986543 348999886 35555554310 0 1236
Q ss_pred cchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC--CceEEEEecCcccccCCCCHHHHHHH
Q 014603 295 PATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPE--GSMFVMVKLNYSLLEGINSDMEFALK 372 (422)
Q Consensus 295 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~ 372 (422)
++...++++.++|+...+..+++..++.+++++++++.|+++ ++.+...+. .+....+..+. .......
T Consensus 253 ~~~~~~~a~~aal~~~~~~g~~~~~~~~~~l~~~l~~~l~~~-g~~~~~~~~~~~~~i~~~~~~~-------~~~~~~~- 323 (379)
T 3ke3_A 253 MPTDSLRQFRDAILEAKEIGFDILRDAQWELGNRVRKVLTDK-GIESVAAEGFEAPGVVVSYTER-------DDMHKGS- 323 (379)
T ss_dssp CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSBCTTCBCSSEEEEECSC-------HHHHSSH-
T ss_pred CCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCEecCCccccCceEEEEccCC-------cchHHHH-
Confidence 777788888888876544557888899999999999999988 676432221 22233333321 1112233
Q ss_pred HHHhcCeEEecCCCCCC-----CCeEEEEec--cChHHHHHHHHHHHHHHHHhc
Q 014603 373 LAKEESVIVLPGITVGL-----KDWLRITFA--VEPSALEDGLGRMKAFYDRHA 419 (422)
Q Consensus 373 l~~~~gi~v~~g~~~~~-----~~~iRis~~--~~~~~l~~~~~~l~~~~~~~~ 419 (422)
.+.++||.+.+|..+.. .+.+||+++ +++++|++++++|+++++++.
T Consensus 324 ~L~~~Gi~v~~g~~~~~~~~~~~~~lRis~~~~~t~~di~~~~~~l~~~l~~~~ 377 (379)
T 3ke3_A 324 AFAEAGLQIAAGVPLKVGEPDNFKTFRLGLFGLDKLTDIDGTVERFEKALDEVL 377 (379)
T ss_dssp HHHHTTCCCEECCCCSSCCCTTCCEEEEECCSHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHCCeEEeCCccccccccCcCCEEEEeCCcCCCHHHHHHHHHHHHHHHHHhc
Confidence 44677999999986543 679999997 788999999999999998765
No 196
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.96 E-value=4e-27 Score=225.50 Aligned_cols=327 Identities=13% Similarity=0.062 Sum_probs=206.9
Q ss_pred CcHHHHHHHHHHhhCCCCCC------CCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCE
Q 014603 63 TASVAVDAIVHSVRSARFNC------YSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGAN 136 (422)
Q Consensus 63 ~~~~v~~a~~~~~~~~~~~~------y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~ 136 (422)
.+|.+.+++.+++.+..... |......+.+++...+++.+.+ +.+++.|++++ |++++..++.+++++||+
T Consensus 42 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~--~~~~~~v~~~s-Gs~a~~~a~~~~~~~gd~ 118 (420)
T 3gbx_A 42 TSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELF--GADYANVQPHS-GSQANFAVYTALLQPGDT 118 (420)
T ss_dssp CCHHHHHHHTSGGGGCCC--------------CHHHHHHHHHHHHHHH--TCSEEECCCSS-HHHHHHHHHHHHCCTTCE
T ss_pred CCHHHHHHHHHHHhcccccCCCCccccCchHHHHHHHHHHHHHHHHHh--CCCCceeEecC-cHHHHHHHHHHhcCCCCE
Confidence 57999999999885422112 2222233444443333333332 34555565554 588999999999999999
Q ss_pred EEecCCCccchH---HHHhhCCC--eEEEeeccCCCCcccCHHHHHHhhcC-CceEEEEeCCCCCcccccCHHHHHHHHH
Q 014603 137 ILLPRPGFPYYE---ARATHSHL--EVRHFDLLPAKGWEVDLDAVEALADE-NTVALVIINPGNPCGNVYTYQHLQKIAE 210 (422)
Q Consensus 137 Vl~~~~~~~~~~---~~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~i~~p~nptG~~~~~~~l~~i~~ 210 (422)
|+++.|+|.++. ......|. ..+.++.+ .++.+|++.|++.+++ +++++++++|+||+ .. ++++|.+
T Consensus 119 v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~--~~---~l~~l~~ 191 (420)
T 3gbx_A 119 VLGMNLAQGGHLTHGSPVNFSGKLYNIVPYGID--ESGKIDYDEMAKLAKEHKPKMIIGGFSAYSG--VV---DWAKMRE 191 (420)
T ss_dssp EEEEEEC------------CHHHHSEEEEEEEC--TTCSCCHHHHHHHHHHHCCSEEEECCTTCCS--CC---CHHHHHH
T ss_pred EEecchhhcceeccchhhhhcccceeEEeccCC--ccCCcCHHHHHHHHHhcCCeEEEEecCccCC--cc---CHHHHHH
Confidence 999999997632 11122233 33444443 4567899999998876 58889888999874 43 4889999
Q ss_pred HHHHcCcEEEEccccccc-ccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhh
Q 014603 211 TAKKLGIMVIADEVYDHL-AFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL 289 (422)
Q Consensus 211 ~~~~~~~~li~D~~~~~~-~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~ 289 (422)
+|++||+++|+||+|... .+.+.....+.. ..+++.|+||+++ |++.||+++++.- +++.+.+....
T Consensus 192 l~~~~~~~li~De~~~~~~~~~~~~~~~~~~-----~di~~~s~sK~~~--g~~gg~~~~~~~~-----~~~~~~~~~~~ 259 (420)
T 3gbx_A 192 IADSIGAYLFVDMAHVAGLIAAGVYPNPVPH-----AHVVTTTTHKTLA--GPRGGLILAKGGD-----EELYKKLNSAV 259 (420)
T ss_dssp HHHHTTCEEEEECTTTHHHHHTTSSCCSTTT-----SSEEEEESSGGGC--SCSCEEEEESSCC-----HHHHHHHHHHH
T ss_pred HHHHcCCEEEEECCcchhceecccCCccccc-----CCEEEeecccCCC--CCCceEEEEcCCc-----HHHHHHhhhhc
Confidence 999999999999997532 233322222211 2388999999974 4556999986310 14666665543
Q ss_pred hh--ccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccccCCCCHH
Q 014603 290 NI--SSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDM 367 (422)
Q Consensus 290 ~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 367 (422)
.. .++++...+.++..++....+.++++.++++.++++.+.+.|++. ++.+...+..+.++|+.++... .+..
T Consensus 260 ~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~----~~~~ 334 (420)
T 3gbx_A 260 FPSAQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVEVFLNR-GYKVVSGGTENHLFLLDLVDKN----LTGK 334 (420)
T ss_dssp C----CCCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECGGGT----CCHH
T ss_pred CCCCCCCcchhHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhc-CCeeccCCCCCeEEEEEcCCCC----CCHH
Confidence 22 224444555554545543334567888899999999999999885 6663322255778888775421 1344
Q ss_pred HHHHHHHHhcCeEEec-------CCCCCCCCeEEEEec------cChHHHHHHHHHHHHHHHHh
Q 014603 368 EFALKLAKEESVIVLP-------GITVGLKDWLRITFA------VEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 368 ~~~~~l~~~~gi~v~~-------g~~~~~~~~iRis~~------~~~~~l~~~~~~l~~~~~~~ 418 (422)
.+ ..+++++||.+.+ +..++ .+.+|++++ .++++++++++.|++++++.
T Consensus 335 ~~-~~~l~~~gi~v~~~~~~~~~~~~~~-~~~iRi~~~~~~~~~~~~~~i~~~~~~l~~~l~~~ 396 (420)
T 3gbx_A 335 EA-DAALGRANITVNKNSVPNDPKSPFV-TSGIRIGSPAVTRRGFKEAEVKELAGWMCDVLDNI 396 (420)
T ss_dssp HH-HHHHHHTTEECEEECCTTCSSCTTT-CSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHTT
T ss_pred HH-HHHHHHCCcEeccccCCCCccccCC-CcceEEecchhcccCCCHHHHHHHHHHHHHHHhCc
Confidence 44 4455778999998 33333 456999986 34789999999999988664
No 197
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.96 E-value=1.4e-26 Score=220.53 Aligned_cols=290 Identities=17% Similarity=0.127 Sum_probs=198.7
Q ss_pred CCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHH----HHhhCCCeEEEee
Q 014603 87 VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEA----RATHSHLEVRHFD 162 (422)
Q Consensus 87 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~----~~~~~g~~~~~~~ 162 (422)
+...+++++++++++ .+..+++++|++|+..++.+++++||+|++++++|.++.. .+...|.+++.++
T Consensus 82 p~~~~le~~lA~l~g--------~~~~v~~~sG~~Ai~~al~al~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~~~~v~ 153 (430)
T 3ri6_A 82 PTVEDLEQRLKNLTG--------ALGVLALGSGMAAISTAILTLARAGDSVVTTDRLFGHTLSLFQKTLPSFGIEVRFVD 153 (430)
T ss_dssp HHHHHHHHHHHHHHT--------CSEEEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHHHC--------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeC
Confidence 456789999999883 2346777788899999999999999999999999988766 6677899988887
Q ss_pred ccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccC
Q 014603 163 LLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG 242 (422)
Q Consensus 163 ~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~ 242 (422)
.+ |++.|++.++++++++++++|+||+|.+++ +++|+++|+++|+++|+|++|+...+ . .....+
T Consensus 154 ~~-------d~~~l~~ai~~~t~~v~~e~p~NptG~~~d---l~~i~~la~~~g~~livD~a~~~~~~----~-~~~~~g 218 (430)
T 3ri6_A 154 VM-------DSLAVEHACDETTKLLFLETISNPQLQVAD---LEALSKVVHAKGIPLVVDTTMTPPYL----L-EAKRLG 218 (430)
T ss_dssp TT-------CHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHTTTCCEEEECTTSCTTT----C-CGGGGT
T ss_pred CC-------CHHHHHHhhCCCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCccccc----C-ChHHcC
Confidence 52 889999999989999999999999999975 77888999999999999999975322 1 112233
Q ss_pred CCCCeEEEecCccccCCCCceeEEEEe-eCCCCccc------------chhHHHHHHhhh--hhccCcchHHHHHHHHHH
Q 014603 243 SIVPVLTLGSISKRWIVPGWRLGWLVT-SDPNGILQ------------DSGIVDSIKSFL--NISSDPATFIQGAVPQIL 307 (422)
Q Consensus 243 ~~~~~i~i~s~sK~~~~~G~r~G~~~~-~~~~~~~~------------~~~~~~~~~~~~--~~~~~~~~~~~~a~~~~l 307 (422)
. .+++.|+||.++++|..+|.+++ ++...... ...++.++.... ......++...+.+...+
T Consensus 219 ~---div~~S~sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g~~~~i~~~~~~~~~~~g~~~~~~~a~l~l~~l 295 (430)
T 3ri6_A 219 V---DIEVLSSTKFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAGPMAFLYKARKEVFQNLGPSLSPHNAYLQSLGL 295 (430)
T ss_dssp C---SEEEEECCCEEETTEEECCEEEEECSCSCGGGSTTTHHHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHHHHHHHH
T ss_pred C---EEEEECCcccccCCCCceEEEEEECChHHhhhccchhhhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHHhhh
Confidence 3 38999999999887765555555 22211100 011122222211 222344545444444434
Q ss_pred hhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC----------------CceEEEEecCcccccCCCCHHHHHH
Q 014603 308 EKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPE----------------GSMFVMVKLNYSLLEGINSDMEFAL 371 (422)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~----------------~g~~~~~~~~~~~~~~~~~~~~~~~ 371 (422)
+ .+..+.++..++++.+.+.|++.|.+..+..|. +|+.+|+.++.. .+...++.
T Consensus 296 ~-----~l~~r~~~~~~na~~la~~L~~~p~v~~V~~P~l~~~p~~~~~~~~~g~Gg~~lsf~l~~~-----~~~~~~~~ 365 (430)
T 3ri6_A 296 E-----TMALRIERSCQNAQELAHWLLSIPQVKCVNHPSLPDSPFYAIAKRQFRYAGSILTFELESK-----EASYRFMD 365 (430)
T ss_dssp H-----HHHHHHHHHHHHHHHHHHHHTTCTTCEEEECTTSTTSTTHHHHHHHCSSCCSEEEEECSSH-----HHHHHHHH
T ss_pred h-----hHHHHHHHHHHHHHHHHHHHhCCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCH-----HHHHHHHH
Confidence 3 355666777888999999999988876444554 444888888631 02334444
Q ss_pred HHHHhcCeEEecCCCCC-----------------------CCCeEEEEeccChHHHHHHHHHHHHHH
Q 014603 372 KLAKEESVIVLPGITVG-----------------------LKDWLRITFAVEPSALEDGLGRMKAFY 415 (422)
Q Consensus 372 ~l~~~~gi~v~~g~~~~-----------------------~~~~iRis~~~~~~~l~~~~~~l~~~~ 415 (422)
.+ +-.++.+.+|..+. .++.||+|++. |+.+.+++.|++++
T Consensus 366 ~l-~~~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~g~~~~liRlsvG~--E~~~dl~~dl~~al 429 (430)
T 3ri6_A 366 AL-KLIRRATNIHDNKSLILSPYHVIYALNSHEERLKLEISPAMMRLSVGI--EEIEDLKEDILQAL 429 (430)
T ss_dssp HC-SSSEECSCCSCSSCEEECTGGGC---------CGGGSCTTEEEEECCS--SCHHHHHHHHHHHH
T ss_pred hC-CcceecCCCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEecc--CCHHHHHHHHHHhh
Confidence 33 44456666666443 15789999985 45556666666665
No 198
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.95 E-value=9.7e-27 Score=220.30 Aligned_cols=283 Identities=18% Similarity=0.132 Sum_probs=194.9
Q ss_pred CCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHH----HHhhCCCeEEEee
Q 014603 87 VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEA----RATHSHLEVRHFD 162 (422)
Q Consensus 87 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~----~~~~~g~~~~~~~ 162 (422)
....++|++++++++ .+ +.+++++|++|++.++. ++++||+|+++.|+|++... .++..|.+++.++
T Consensus 55 ~~~~~lr~~la~~~g------~~--~~i~~~sGt~a~~~al~-~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~ 125 (393)
T 1n8p_A 55 PNRENLERAVAALEN------AQ--YGLAFSSGSATTATILQ-SLPQGSHAVSIGDVYGGTHRYFTKVANAHGVETSFTN 125 (393)
T ss_dssp HHHHHHHHHHHHHTT------CS--EEEEESCHHHHHHHHHH-TSCSSCEEEEESSCCHHHHHHHHHTSTTTCSCCEEES
T ss_pred hhHHHHHHHHHHHhC------CC--cEEEECChHHHHHHHHH-HcCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEeC
Confidence 346799999999983 22 56666677999999999 88999999999999985443 3456788888876
Q ss_pred ccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHc----CcEEEEcccccccccCCCCCCCc
Q 014603 163 LLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKL----GIMVIADEVYDHLAFGNTPFVPM 238 (422)
Q Consensus 163 ~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~----~~~li~D~~~~~~~~~~~~~~~~ 238 (422)
.+ | +.+++.++++++++++++|+||||.+++ +++|.++|+++ |+++|+|++|+.+.+. ..
T Consensus 126 ~~-------d-~~l~~~i~~~t~lv~~~~~~nptG~~~~---l~~i~~la~~~~~~~~~~livD~a~~~~~~~-----~~ 189 (393)
T 1n8p_A 126 DL-------L-NDLPQLIKENTKLVWIETPTNPTLKVTD---IQKVADLIKKHAAGQDVILVVDNTFLSPYIS-----NP 189 (393)
T ss_dssp SH-------H-HHHHHHSCSSEEEEEECSSCTTTCCCCC---HHHHHHHHHHHTTTTTCEEEEECTTTHHHHC-----CG
T ss_pred CC-------h-HHHHHhcccCceEEEEECCCCCcceecC---HHHHHHHHHHhCCCCCCEEEEeCCccccccC-----CH
Confidence 52 6 8899989888999999999999999975 78888999999 9999999999876542 12
Q ss_pred cccCCCCCeEEEecCccccCCCCcee-EEEEeeCCCCcccchhHHHHHHhhhh-hccCcchHHHHHHHHHHhhchHHHHH
Q 014603 239 GVFGSIVPVLTLGSISKRWIVPGWRL-GWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQGAVPQILEKTEEEFFS 316 (422)
Q Consensus 239 ~~~~~~~~~i~i~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~ 316 (422)
..++ ..+++.|+||.++++|+|+ ||+++++ +++++.+..... ...+.++..+.++...++. +.
T Consensus 190 ~~~~---~di~~~S~sK~~g~~G~rigG~~~~~~-------~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~-----~~ 254 (393)
T 1n8p_A 190 LNFG---ADIVVHSATKYINGHSDVVLGVLATNN-------KPLYERLQFLQNAIGAIPSPFDAWLTHRGLKT-----LH 254 (393)
T ss_dssp GGGT---CSEEEEETTTTTTCSSCCCCEEEEESC-------HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT-----HH
T ss_pred HHcC---CeEEEEECcccccCCCCceeEEEEeCC-------HHHHHHHHHHHHhcCCCCCHHHHHHHHhccch-----HH
Confidence 2233 3489999999999999999 9988742 467777766543 2334556666666666654 44
Q ss_pred HHHHHHHHHHHHHHHHhhcCCC-CCCCCCC----------------C-C-ceEEEEecCcccccCCCCHHHHHHHHHHhc
Q 014603 317 KITDILRETADICCDRLKEIPC-ITCPKKP----------------E-G-SMFVMVKLNYSLLEGINSDMEFALKLAKEE 377 (422)
Q Consensus 317 ~~~~~~~~~~~~l~~~L~~~~~-~~~~~~~----------------~-~-g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 377 (422)
...++..++.+.+.+.|++.+. +..+..| . . +.++++.++... .+...++..+ +..
T Consensus 255 ~~~~~~~~~~~~l~~~L~~~~~~l~~v~~p~l~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~----~~~~~~l~~l-~~~ 329 (393)
T 1n8p_A 255 LRVRQAALSANKIAEFLAADKENVVAVNYPGLKTHPNYDVVLKQHRDALGGGMISFRIKGGA----EAASKFASST-RLF 329 (393)
T ss_dssp HHHHHHHHHHHHHHHHHTSCTTTEEEEECTTSTTSTTHHHHHHHSGGGCCCSEEEEEESSCH----HHHHHHHHHC-SSS
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCceEEECCCCCCCccHHHHHhhCCCCCCccEEEEEeCCcH----HHHHHHHhhC-Ccc
Confidence 4555666677777777777644 2211111 1 2 557777775310 0122333332 333
Q ss_pred CeEEecCC----------CC------------CC-CCeEEEEec--cChHHHHHHHHHHHHH
Q 014603 378 SVIVLPGI----------TV------------GL-KDWLRITFA--VEPSALEDGLGRMKAF 414 (422)
Q Consensus 378 gi~v~~g~----------~~------------~~-~~~iRis~~--~~~~~l~~~~~~l~~~ 414 (422)
++.+..|+ .. +. ++.+|+|++ +++++++.+.+.|+++
T Consensus 330 ~~~~s~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~iRlS~g~~~~~~~i~~l~~al~~~ 391 (393)
T 1n8p_A 330 TLAESLGGIESLLEVPAVMTHGGIPKEAREASGVFDDLVRISVGIEDTDDLLEDIKQALKQA 391 (393)
T ss_dssp EECSCCCCSSCEEECTTTTTSCSSCTTTTTTTSCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred eECCCCCCCcceeeccccccccccCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHHh
Confidence 44443332 11 11 478999999 4567777777766653
No 199
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.95 E-value=8.5e-27 Score=227.82 Aligned_cols=336 Identities=13% Similarity=0.104 Sum_probs=224.4
Q ss_pred CCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHh----c------
Q 014603 62 RTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVL----A------ 131 (422)
Q Consensus 62 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l----~------ 131 (422)
+.++.+.+++.....+.....|.......++++.+.+++.+.+|.+ ..+.+++|+|+++|+..++.+. +
T Consensus 111 ~~~~~v~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~~~g~~-~~~~~~~t~ggt~a~~~al~~ar~~~~~~~~~~ 189 (497)
T 2qma_A 111 PLMPAVAAEAMIAALNQSMDSWDQASSATYVEQKVVNWLCDKYDLS-EKADGIFTSGGTQSNQMGLMLARDWIADKLSGH 189 (497)
T ss_dssp CBHHHHHHHHHHHHHCCCTTCGGGCHHHHHHHHHHHHHHHHHTTCC-TTCEEEEESSHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CcHHHHHHHHHHHhhcccccchhhChHHHHHHHHHHHHHHHHhCCC-CCCCeEEcCCchHHHHHHHHHHHHHHHHhhccc
Confidence 5577888887666554333345544456788888777777766643 2378999999999999988873 2
Q ss_pred ---CC------CC-EEEecCCCccchHHHHhhCCC---eEEEeeccCCCCcccCHHHHHHhhcCC----ce--EEEEeCC
Q 014603 132 ---RP------GA-NILLPRPGFPYYEARATHSHL---EVRHFDLLPAKGWEVDLDAVEALADEN----TV--ALVIINP 192 (422)
Q Consensus 132 ---~~------gd-~Vl~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~~~~~----~~--~i~i~~p 192 (422)
.+ |+ .|+++.++|+++...+...|. +++.+|.+ .++.+|++.|++.++++ ++ +++++.+
T Consensus 190 ~~~~~G~~~~~g~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~~--~~~~~d~~~L~~~i~~~~~~~~~~~~vv~~~~ 267 (497)
T 2qma_A 190 SIQKLGLPDYADKLRIVCSKKSHFTVQKSASWMGLGEKAVMTVDAN--ADGTMDITKLDEVIAQAKAEGLIPFAIVGTAG 267 (497)
T ss_dssp CHHHHCSCGGGGGEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBC--TTSSBCGGGHHHHHHHHHHTTCEEEEEEEEBS
T ss_pred chhhcccccccCCeEEEECCCchHHHHHHHHHcCCCcccEEEEecC--CCCcCCHHHHHHHHHHHHHCCCcceEEEEcCC
Confidence 12 46 799999999999888888876 68888875 35679999999988643 33 7788899
Q ss_pred CCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCC
Q 014603 193 GNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDP 272 (422)
Q Consensus 193 ~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~ 272 (422)
+||||.. +++++|.++|+++|+++++|++|+.+.+.......+..+. ...+++.|+||++++| .++|+++++++
T Consensus 268 ~~~tG~~---~~l~~I~~l~~~~~~~l~vD~a~~~~~~~~~~~~~~~gi~--~~D~i~~s~hK~l~~p-~~~G~l~~~~~ 341 (497)
T 2qma_A 268 TTDHGAI---DDLDFIADMAVKHDMWMHVDGAYGGALILSSHKSRLKGVE--RAHSISVDFHKLFYQT-ISCGALLVNDK 341 (497)
T ss_dssp CTTTCCB---CCHHHHHHHHHHHTCEEEEEETTGGGGGGSTTGGGGTTGG--GCSEEEEETTTTTCCC-SSCEEEEESCG
T ss_pred CCCCCCC---CCHHHHHHHHHHcCCEEEEehhhhHHHHhCcchHhhcCcc--cCCEEEEcchhccCCC-cceEEEEEeCH
Confidence 9999998 6688999999999999999999987654322110122221 1126778999987665 68999998753
Q ss_pred CCcccchhHHHHHHhhhhh-cc----Ccc-------------hHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhh
Q 014603 273 NGILQDSGIVDSIKSFLNI-SS----DPA-------------TFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLK 334 (422)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~-~~----~~~-------------~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~ 334 (422)
. .++.+.....+ .. .++ .+.++++ ++.....++.+..++..++++++.+.|+
T Consensus 342 ~-------~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~r~~~al~~~~~---l~~lg~~g~~~~~~~~~~~a~~l~~~L~ 411 (497)
T 2qma_A 342 S-------NFKFLLHHADYLNREHDELPNLVDKSIATTKRFDALKVFMT---MQNVGPKALGDMYDHLLAQTLEVADMIR 411 (497)
T ss_dssp G-------GGGGGCC--------------------CCSCCCTHHHHHHH---HHHTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred H-------HHHHhcCCchhcCCccccCCCccccCCCCCCchhHHHHHHH---HHHhCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 2 11111110000 00 011 1222333 3322356788888999999999999999
Q ss_pred cCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEe-c--cChHHHHHHHHHH
Q 014603 335 EIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITF-A--VEPSALEDGLGRM 411 (422)
Q Consensus 335 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~-~--~~~~~l~~~~~~l 411 (422)
+++++.++..|..+ ++++++............++...+ .+.|+.+.++..+...+++|+++ + ++++++++++++|
T Consensus 412 ~~~~~~~~~~~~~~-~v~f~~~~~~~~~~~l~~~l~~~l-~~~G~~~~~~~~~~g~~~lRis~~~~~~t~edi~~~~~~l 489 (497)
T 2qma_A 412 TNDQFELLAEPSLS-TVLFRATHETADLDELNKALRLEA-LTRGIAVLGETIVDGKTALKFTILNPCLTTSDFESLLSKI 489 (497)
T ss_dssp TCTTEEECSCCSSS-EEEEEECCSSSCHHHHHHHHHHHH-HHHTSCBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHH
T ss_pred hCCCeEEEcCCCce-EEEEEEcCCccCHHHHHHHHHHHH-HhCCCEEEEeeEECCEEEEEEEecCCCCCHHHHHHHHHHH
Confidence 98888744445544 556666431100000012344444 45588887654444457899998 3 7899999999999
Q ss_pred HHHHHHh
Q 014603 412 KAFYDRH 418 (422)
Q Consensus 412 ~~~~~~~ 418 (422)
+++++++
T Consensus 490 ~~~~~~~ 496 (497)
T 2qma_A 490 NMLAVEL 496 (497)
T ss_dssp HHHHHHC
T ss_pred HHHHHhh
Confidence 9988764
No 200
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.95 E-value=2.7e-26 Score=224.64 Aligned_cols=329 Identities=9% Similarity=0.021 Sum_probs=222.6
Q ss_pred HHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcC--------CC-----C
Q 014603 69 DAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLAR--------PG-----A 135 (422)
Q Consensus 69 ~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~--------~g-----d 135 (422)
+.+...++. ....|.......++++.+.+++.+.+|.+.+.+++++|+|+|+|+..++.++.. +| +
T Consensus 111 ~~l~~~~n~-~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~ 189 (504)
T 2okj_A 111 EWLTSTANT-NMFTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPK 189 (504)
T ss_dssp HHHHHHHCC-BSSCTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCC
T ss_pred HHHHHhhcc-CCCchhhChHHHHHHHHHHHHHHHHhCCCCCCCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCC
Confidence 444444433 223455545556777777777776666443367899999999999999888742 46 6
Q ss_pred -EEEecCCCccchHHHHhhCCC---eEEEeeccCCCCcccCHHHHHHhhcC------CceEEEEeCCCCCcccccCHHHH
Q 014603 136 -NILLPRPGFPYYEARATHSHL---EVRHFDLLPAKGWEVDLDAVEALADE------NTVALVIINPGNPCGNVYTYQHL 205 (422)
Q Consensus 136 -~Vl~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~i~i~~p~nptG~~~~~~~l 205 (422)
.|+++.++|+++...+...|. +++.++.+ .++.+|++.|++.+++ +++++++++|+||||.+ +++
T Consensus 190 ~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~~--~~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i---~~l 264 (504)
T 2okj_A 190 LVLFTSEQSHYSIKKAGAALGFGTDNVILIKCN--ERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAF---DPI 264 (504)
T ss_dssp EEEEEETTSCTHHHHHHHHTTSCGGGEEEECBC--TTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCB---CCH
T ss_pred eEEEECCcchHHHHHHHHHcCCCcccEEEEecC--CCCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCc---CCH
Confidence 789999999999988888877 78888874 3577999999998865 47888999999999998 568
Q ss_pred HHHHHHHHHcCcEEEEcccccccccCCCCC-CCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHH
Q 014603 206 QKIAETAKKLGIMVIADEVYDHLAFGNTPF-VPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDS 284 (422)
Q Consensus 206 ~~i~~~~~~~~~~li~D~~~~~~~~~~~~~-~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~ 284 (422)
++|.++|+++|+++++|++|+.+.+..... ..+..+.. ..+++.|++|+++.| .++|+++++++ ++...
T Consensus 265 ~~I~~la~~~g~~lhvD~a~~~~~~~~~~~~~~~~g~~~--~D~i~~~~hK~~~~p-~~~g~l~~~~~-------~~~~~ 334 (504)
T 2okj_A 265 QEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIER--ANSVTWNPHKMMGVL-LQCSAILVKEK-------GILQG 334 (504)
T ss_dssp HHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGG--CSEEEECTTSTTCCC-SCCEEEEESST-------THHHH
T ss_pred HHHHHHHHHcCCEEEEehhhhhHHHhCHhhHhhcCCccc--CCEEEECchhhcCCC-cceEEEEEECH-------HHHHH
Confidence 889999999999999999998765432111 12221211 126778999997655 68999999752 24332
Q ss_pred HH-hhhhhc-c--------------------CcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC
Q 014603 285 IK-SFLNIS-S--------------------DPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCP 342 (422)
Q Consensus 285 ~~-~~~~~~-~--------------------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 342 (422)
.. ....+. + ....+.++++..++. ..++.+..++..++++++.+.|+++|++.++
T Consensus 335 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~rr~~~l~~~a~l~~lg---~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~ 411 (504)
T 2okj_A 335 CNQMCAGYLFQPDKQYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKG---TVGFENQINKCLELAEYLYAKIKNREEFEMV 411 (504)
T ss_dssp HHCCCCSSSCCSCCSSCGGGCCGGGSSCSSCBCCHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHTTCTTEEES
T ss_pred HhcCCCccccCCcccccCcCCcccCCCCCCCCccHHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 21 110000 0 112455555555554 4668888899999999999999998888754
Q ss_pred C--CCCCceEEEEecCccccc--C--------CCCHHHHHHHHHHhcCe-EEecCCCCCC-CCeEEEEec---cChHHHH
Q 014603 343 K--KPEGSMFVMVKLNYSLLE--G--------INSDMEFALKLAKEESV-IVLPGITVGL-KDWLRITFA---VEPSALE 405 (422)
Q Consensus 343 ~--~~~~g~~~~~~~~~~~~~--~--------~~~~~~~~~~l~~~~gi-~v~~g~~~~~-~~~iRis~~---~~~~~l~ 405 (422)
. .|..+.+.+...+..... . .....++...+.+ .|+ .+.++ .+.. .+++|++++ +++++++
T Consensus 412 ~~~~p~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~G~~~~~~~-~~~~~~~~lRis~~~~~~t~edi~ 489 (504)
T 2okj_A 412 FNGEPEHTNVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMME-SGTTMVGYQ-PQGDKANFFRMVISNPAATQSDID 489 (504)
T ss_dssp SSSCCSSSCEEEEECCGGGSSCCCCHHHHHHHTTHHHHHHHHHHH-HTSCEEEEE-EETTEEEEEEECCCCTTCCHHHHH
T ss_pred ecCCCCeEEEEEEEeCccccccccchhhHHHHHHHHHHHHHHHHh-CCcEEEEee-EECCceEEEEEEeCCCCCCHHHHH
Confidence 3 366666665444421000 0 0002345556654 475 44432 2322 368999996 6899999
Q ss_pred HHHHHHHHHHHHh
Q 014603 406 DGLGRMKAFYDRH 418 (422)
Q Consensus 406 ~~~~~l~~~~~~~ 418 (422)
+++++|+++++++
T Consensus 490 ~~~~~l~~~~~~~ 502 (504)
T 2okj_A 490 FLIEEIERLGQDL 502 (504)
T ss_dssp HHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHH
Confidence 9999999887654
No 201
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.95 E-value=3.5e-26 Score=217.02 Aligned_cols=310 Identities=15% Similarity=0.152 Sum_probs=213.0
Q ss_pred cHHHHHHHHHHhhCCCCCCCCCCCC--CHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHh-cCCCCEEEec
Q 014603 64 ASVAVDAIVHSVRSARFNCYSSTVG--ILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVL-ARPGANILLP 140 (422)
Q Consensus 64 ~~~v~~a~~~~~~~~~~~~y~~~~g--~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l-~~~gd~Vl~~ 140 (422)
++++.+++.+.+.. .|.+..| ..++|++++++++ .+++++++|+++|++.++.++ +++||+|+++
T Consensus 11 ~~~v~~a~~~~~~~----~~~~~~g~~~~~l~~~la~~~~--------~~~v~~~~ggt~al~~~~~~l~~~~gd~Vl~~ 78 (394)
T 1o69_A 11 GGNELKYIEEVFKS----NYIAPLGEFVNRFEQSVKDYSK--------SENALALNSATAALHLALRVAGVKQDDIVLAS 78 (394)
T ss_dssp -CCHHHHHHHHHHH----TTTSCTTHHHHHHHHHHHHHHC--------CSEEEEESCHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred CHHHHHHHHHHHHc----CCccCCChHHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHcCCCCCCEEEEC
Confidence 46778888888765 2544456 8899999999993 268999999999999999999 8999999999
Q ss_pred CCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC---CceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCc
Q 014603 141 RPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE---NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGI 217 (422)
Q Consensus 141 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~---~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~ 217 (422)
.|+|+++...+...|.+++.++.+ +++.+|++.+++.+++ +++++++++ |+|.. .++++|.++|+++|+
T Consensus 79 ~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~~~v~~~~---~~G~~---~~l~~i~~l~~~~~~ 150 (394)
T 1o69_A 79 SFTFIASVAPICYLKAKPVFIDCD--ETYNIDVDLLKLAIKECEKKPKALILTH---LYGNA---AKMDEIVEICKENDI 150 (394)
T ss_dssp SSSCGGGTHHHHHTTCEEEEECBC--TTSSBCHHHHHHHHHHCSSCCCEEEEEC---GGGCC---CCHHHHHHHHHHTTC
T ss_pred CCccHHHHHHHHHcCCEEEEEEeC--CCCCcCHHHHHHHHhcccCCceEEEEEC---CCCCh---hhHHHHHHHHHHcCC
Confidence 999999999999999999999876 4567899999998875 688888875 79976 678899999999999
Q ss_pred EEEEccccc-ccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhhhcc-C-
Q 014603 218 MVIADEVYD-HLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISS-D- 294 (422)
Q Consensus 218 ~li~D~~~~-~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~- 294 (422)
++|+|++|+ ++.+.+... ..+. + +.+.|+||..+++|.|+||+++++ +++++++........ .
T Consensus 151 ~li~Dea~~~g~~~~~~~~---~~~~--~--~~~~s~s~~K~l~~~~~G~~~~~~-------~~l~~~l~~~~~~~~~~~ 216 (394)
T 1o69_A 151 VLIEDAAEALGSFYKNKAL---GTFG--E--FGVYSYNGNKIITTSGGGMLIGKN-------KEKIEKARFYSTQARENC 216 (394)
T ss_dssp EEEEECTTCTTCEETTEET---TSSS--S--EEEEECCTTSSSCCSSCEEEEESC-------HHHHHHHHHHTBTCCCSS
T ss_pred EEEEECcCcccceeCCccc---cccc--C--cEEEEEeCCccCCCCCceEEEECC-------HHHHHHHHHHHHhccccC
Confidence 999999998 444443211 1111 1 445555433344567899999853 467777765432210 0
Q ss_pred -------------cchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC----Cce-EEEEecC
Q 014603 295 -------------PATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPE----GSM-FVMVKLN 356 (422)
Q Consensus 295 -------------~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~----~g~-~~~~~~~ 356 (422)
.+.+...++...++ ++++..++++++++++.+.|+++ +.+. .+. .++ ++++.++
T Consensus 217 ~~~~~~~~g~~~~~~~~~aa~~l~~l~-----~l~~~~~~~~~~~~~l~~~L~~~--~~~~-~~~~~~~~~~~~~~i~~~ 288 (394)
T 1o69_A 217 LHYEHLDYGYNYRLSNVLGAIGVAQME-----VLEQRVLKKREIYEWYKEFLGEY--FSFL-DELENSRSNRWLSTALIN 288 (394)
T ss_dssp SSCCCSSCCCBCBCCHHHHHHHHHHHT-----THHHHHHHHHHHHHHHHHHHTTT--EECC-CCCTTEECCCSSEEEEES
T ss_pred ccccccccCcccCcCHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHhccc--cccc-CCCCCCcceeEEEEEEec
Confidence 12222222222233 35667788889999999999886 4422 221 222 3556665
Q ss_pred ccc--------------ccC--CCCHHHHHHHHHHhcCeEEecCCCCC-----CC---------------CeEEEEec--
Q 014603 357 YSL--------------LEG--INSDMEFALKLAKEESVIVLPGITVG-----LK---------------DWLRITFA-- 398 (422)
Q Consensus 357 ~~~--------------~~~--~~~~~~~~~~l~~~~gi~v~~g~~~~-----~~---------------~~iRis~~-- 398 (422)
... .+. ..+..++...| .++||.+.+|..+. .. ..+|+...
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L-~~~gI~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (394)
T 1o69_A 289 FDKNELNACQKDINISQKNITLHPKISKLIEDL-KNKQIETRPLWKAMHTQEVFKGAKAYLNGNSELFFQKGICLPSGTA 367 (394)
T ss_dssp CCGGGSCCCCEEEECCCCCCCCCHHHHHHHHHH-HHTTCCCBCCCCCGGGCGGGTTCEEEECSHHHHHHHHEEEECCCTT
T ss_pred chhhccccccccccccccccccccCHHHHHHHH-HHcCCcccccCCccccchhhhccCCCCChHHHHHhcCeEEccCCCC
Confidence 210 000 00244555555 56799999985330 01 23444444
Q ss_pred cChHHHHHHHHHHHHHHH
Q 014603 399 VEPSALEDGLGRMKAFYD 416 (422)
Q Consensus 399 ~~~~~l~~~~~~l~~~~~ 416 (422)
++++|++++++.|+++++
T Consensus 368 ~t~edi~~~~~~l~~~~~ 385 (394)
T 1o69_A 368 MSKDDVYEISKLILKSIK 385 (394)
T ss_dssp CCHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHHHh
Confidence 789999999999998764
No 202
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.95 E-value=1.2e-26 Score=218.35 Aligned_cols=314 Identities=13% Similarity=0.119 Sum_probs=217.6
Q ss_pred CCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHH-HHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHh-cCCCCEEE
Q 014603 61 FRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAI-ADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVL-ARPGANIL 138 (422)
Q Consensus 61 ~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~i-a~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l-~~~gd~Vl 138 (422)
+++++++.+++.+.+..+....|. ....++|+++ +++++ ..+++++++||++|+..++.++ +++||+|+
T Consensus 12 ~~~~~~i~~a~~~~~~~~~~~~~~--~~~~~l~~~~~a~~~g-------~~~~~v~~~sgt~al~~al~~l~~~~Gd~Vi 82 (377)
T 3ju7_A 12 TVPVIEYLDELKEIDASHIYTNYG--PINQRFEQTIMSGFFQ-------NRGAVTTVANATLGLMAAIQLKKRKKGKYAL 82 (377)
T ss_dssp CCCGGGGHHHHHHHHHHTCCSSSC--HHHHHHHHHHHHHTST-------TCSEEEEESCHHHHHHHHHHHHSCTTCCEEE
T ss_pred CCCcHHHHHHHHHHHHcCCcccCC--HHHHHHHHHHHHHHhC-------CCCeEEEeCCHHHHHHHHHHHcCCCCcCEEE
Confidence 788899999999988765432233 3468999999 99982 2567999999999999999998 89999999
Q ss_pred ecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhh-cCC--ceEEEEeCCCCCcccccCHHHHHHHHHHHHHc
Q 014603 139 LPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALA-DEN--TVALVIINPGNPCGNVYTYQHLQKIAETAKKL 215 (422)
Q Consensus 139 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~-~~~--~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~ 215 (422)
++.++|..+...+...|++++.+++++ +++.+|++.+++.+ +++ +++++ |+||+|... ++++|.++|+ +
T Consensus 83 ~~~~~~~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~tk~v~---~~~~~G~~~---~~~~i~~la~-~ 154 (377)
T 3ju7_A 83 MPSFTFPATPLAAIWCGLEPYFIDISI-DDWYMDKTVLWDKIEELKEEVAIVV---PYATFGSWM---NLEEYEELEK-K 154 (377)
T ss_dssp EESSSCTHHHHHHHHTTCEEEEECBCT-TTCSBCHHHHHHHHHHHGGGEEEEC---CBCGGGBCC---CCHHHHHHHH-T
T ss_pred ECCCCcHHHHHHHHHcCCEEEEEecCC-ccCCcCHHHHHHHHhcCCCCceEEE---EECCCCCcc---CHHHHHHHHh-c
Confidence 999999999999999999999999864 46789999999987 555 77765 678899985 4778888899 9
Q ss_pred CcEEEEccccccccc-CCCCCCCc-cccCCCCCeEEEecC--ccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhhh
Q 014603 216 GIMVIADEVYDHLAF-GNTPFVPM-GVFGSIVPVLTLGSI--SKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI 291 (422)
Q Consensus 216 ~~~li~D~~~~~~~~-~~~~~~~~-~~~~~~~~~i~i~s~--sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (422)
|++||+|++|+.... .+. .+ ..+. + +.+.|| +|.+++ | +.|++++++ +++.++++.....
T Consensus 155 ~~~vi~D~a~a~g~~~~~~---~~g~~~~-d---~~~~S~~~~K~l~~-g-~gG~~~~~~-------~~l~~~~~~~~~~ 218 (377)
T 3ju7_A 155 GVPVVVDAAPGFGLMNGGM---HYGQDFS-G---MIIYSFHATKPFGI-G-EGGLIYSKN-------EEDIQRIKRMGNF 218 (377)
T ss_dssp TCCBEEECTTCTTCEETTE---ETTTTCS-S---EEEEECBTTSSSCC-B-SCEEEEESC-------HHHHHHHHHHTBT
T ss_pred CCEEEEECCCccCCeECCE---eccCCCC-c---EEEEECCCCCcCCC-C-CcEEEEECC-------HHHHHHHHHHHhc
Confidence 999999999986332 111 11 1111 1 555554 698765 4 578888764 5677777655431
Q ss_pred -------------ccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCc-----eEEEE
Q 014603 292 -------------SSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGS-----MFVMV 353 (422)
Q Consensus 292 -------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g-----~~~~~ 353 (422)
....+.+.++.+...++. ++...++.+++++.+.+.|++++++.....+..+ .++.+
T Consensus 219 g~~~~~~~~~~g~~~~~~~~~aa~~~~~l~~-----l~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (377)
T 3ju7_A 219 GFDTNRECTMMGFNCKMSEYAAAIGIATMKK-----WDDKLKERTRISEWYKQLLQSNGLMKKGWQLQKTEAVIQQFMPI 293 (377)
T ss_dssp TBCTTSCBCSSCCBCCCCHHHHHHHHHHHHT-----HHHHHHHHHHHHHHHHHHHHHTTTTTTTCBCCCCSCBCCSSEEE
T ss_pred CCCCCCceeeccccCCCCHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHhcCCCCccccccCCCCCcceEEEEEE
Confidence 123344444444444543 5666777778888888888888654322222221 13334
Q ss_pred ecCcccccCCCCHHHHHHHHHHhcCeEEecCCC--CCC-------------------CCeEEEEec--cChHHHHHHHHH
Q 014603 354 KLNYSLLEGINSDMEFALKLAKEESVIVLPGIT--VGL-------------------KDWLRITFA--VEPSALEDGLGR 410 (422)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~--~~~-------------------~~~iRis~~--~~~~~l~~~~~~ 410 (422)
.++.. .+..++...| +++||.+..+.. +.. .+.+|+.++ .+++++++.++.
T Consensus 294 ~~~~~-----~~~~~l~~~L-~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lp~~~~~t~~di~~v~~~ 367 (377)
T 3ju7_A 294 LCPEE-----VRNKQVIEDL-KKQKIEARLYFSPSCHQQVLFRNYKSTDLTRTNKIAKRIVSLPLWEGMTKEIVEQIVIC 367 (377)
T ss_dssp ECCTT-----SCHHHHHHHH-HTTTBCCBCTTSSCGGGSGGGTTSCBSCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHH
T ss_pred EeCCh-----hhHHHHHHHH-HHCCCceecccCCccccchhhhcCCCCCCHHHHHHHhCEEECCCCCCCCHHHHHHHHHH
Confidence 44421 1255565555 667999987652 110 356898887 789999999999
Q ss_pred HHHHHHHh
Q 014603 411 MKAFYDRH 418 (422)
Q Consensus 411 l~~~~~~~ 418 (422)
|++++..+
T Consensus 368 l~~~~~~~ 375 (377)
T 3ju7_A 368 LGQKVVSA 375 (377)
T ss_dssp HTC-----
T ss_pred HHHHHhcc
Confidence 99887654
No 203
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.95 E-value=1.3e-25 Score=213.20 Aligned_cols=282 Identities=16% Similarity=0.150 Sum_probs=191.6
Q ss_pred CCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHH----HHhhCCCeEEEee
Q 014603 87 VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEA----RATHSHLEVRHFD 162 (422)
Q Consensus 87 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~----~~~~~g~~~~~~~ 162 (422)
.+..++|++++++++ .. +.|+++ +|++|+..++. ++++||+|+++.|+|++... .++..|.+++.++
T Consensus 67 p~~~~l~~~la~~~g------~~-~~i~~~-sG~~ai~~~~~-l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~v~ 137 (403)
T 3cog_A 67 PTRNCLEKAVAALDG------AK-YCLAFA-SGLAATVTITH-LLKAGDQIICMDDVYGGTNRYFRQVASEFGLKISFVD 137 (403)
T ss_dssp HHHHHHHHHHHHHHT------CS-EEEEES-CHHHHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHTGGGGTCEEEEEC
T ss_pred chHHHHHHHHHHHhC------CC-cEEEEC-CHHHHHHHHHH-HhCCCCEEEEeCCCcchHHHHHHHHHHHcCCEEEEEC
Confidence 456899999999994 22 455555 55699999999 88999999999999987443 3356788888887
Q ss_pred ccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcC-cEEEEcccccccccCCCCCCCcccc
Q 014603 163 LLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLG-IMVIADEVYDHLAFGNTPFVPMGVF 241 (422)
Q Consensus 163 ~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~-~~li~D~~~~~~~~~~~~~~~~~~~ 241 (422)
.+ |++.+++.++++++++++++|+||||.+++ +++|+++|+++| +++|+|++|..+.+. .++. +
T Consensus 138 ~~-------d~~~l~~~i~~~t~~v~~~~p~nptG~~~~---l~~i~~la~~~g~~~livD~~~~~~~~~----~~~~-~ 202 (403)
T 3cog_A 138 CS-------KIKLLEAAITPETKLVWIETPTNPTQKVID---IEGCAHIVHKHGDIILVVDNTFMSPYFQ----RPLA-L 202 (403)
T ss_dssp TT-------SHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHTSSSCCEEEEECTTTCTTTC----CTTT-T
T ss_pred CC-------CHHHHHHhcCcCCeEEEEECCCCCCCeeeC---HHHHHHHHHHcCCCEEEEECCCcccccC----Cccc-c
Confidence 52 789999999889999999999999999975 888899999999 999999999875432 1221 2
Q ss_pred CCCCCeEEEecCccccCCCC-ceeEEEEeeCCCCcccchhHHHHHHhhhh-hccCcchHHHHHHHHHHhhchHHHHHHHH
Q 014603 242 GSIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQGAVPQILEKTEEEFFSKIT 319 (422)
Q Consensus 242 ~~~~~~i~i~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~ 319 (422)
+ ..+++.|+||.++++| .|+||+++++ +++.+++..... .....+++.++++...++. +..+.
T Consensus 203 ~---~div~~S~sK~~~g~~~~~~G~v~~~~-------~~l~~~l~~~~~~~g~~~~~~~~~~~~~~l~~-----l~~r~ 267 (403)
T 3cog_A 203 G---ADISMYSATKYMNGHSDVVMGLVSVNC-------ESLHNRLRFLQNSLGAVPSPIDCYLCNRGLKT-----LHVRM 267 (403)
T ss_dssp T---CSEEEEETTTTTTCSSCCCCEEEEECC-------HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT-----HHHHH
T ss_pred C---CeEEEEcChhhccCCCCCeEEEEEECc-------HHHHHHHHHHHHhcCCCCCHHHHHHHHhhhhH-----HHHHH
Confidence 2 3499999999988766 5799999853 467777776554 3345677888887777765 23333
Q ss_pred HHHHHHHHHHHHHhhcC--------------CCCCCCCCCC---CceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEe
Q 014603 320 DILRETADICCDRLKEI--------------PCITCPKKPE---GSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVL 382 (422)
Q Consensus 320 ~~~~~~~~~l~~~L~~~--------------~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~ 382 (422)
++..++...+.+.|++. |++.+. .+. .|.++.+.++. .. +....++++.||.+.
T Consensus 268 ~~~~~n~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~-~~~~~~~g~~~~~~l~~-------~~-~~~~~~l~~~~i~~~ 338 (403)
T 3cog_A 268 EKHFKNGMAVAQFLESNPWVEKVIYPGLPSHPQHELV-KRQCTGCTGMVTFYIKG-------TL-QHAEIFLKNLKLFTL 338 (403)
T ss_dssp HHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHH-HHHCSCCCSEEEEEESS-------CH-HHHHHHHHHCSSSEE
T ss_pred HHHHHHHHHHHHHHhcCCCEEEEECCCCCCCCcHHHH-HhcCCCCceEEEEEecC-------CH-HHHHHHHHhCCcceE
Confidence 44444554555555443 232211 111 13344445643 12 334555677787554
Q ss_pred c---CC----------CC------------CC-CCeEEEEeccChHHHHHHHHHHHHHHHHh
Q 014603 383 P---GI----------TV------------GL-KDWLRITFAVEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 383 ~---g~----------~~------------~~-~~~iRis~~~~~~~l~~~~~~l~~~~~~~ 418 (422)
. |. .. +. ++++|+|++. ++.++.++.|.+++++.
T Consensus 339 ~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlSvg~--e~~~d~i~~l~~al~~~ 398 (403)
T 3cog_A 339 AESLGGFESLAELPAIMTHASVLKNDRDVLGISDTLIRLSVGL--EDEEDLLEDLDQALKAA 398 (403)
T ss_dssp CSCCSSSSCEEECTTTTTTTTSCHHHHHHHTCCTTEEEEECCS--SCHHHHHHHHHHHHHHH
T ss_pred ccCCCCcceeeecccccccccCCHHHHHhcCCCcCeEEEEeCC--CCHHHHHHHHHHHHHHh
Confidence 2 21 11 22 5799999995 23444555555555544
No 204
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.95 E-value=1.1e-25 Score=219.86 Aligned_cols=336 Identities=9% Similarity=0.021 Sum_probs=227.6
Q ss_pred HHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcC------------
Q 014603 65 SVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLAR------------ 132 (422)
Q Consensus 65 ~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~------------ 132 (422)
..+.+++...+.. ....|....+..++++.+++++.+.+|.+.+++.+++|+|+|+|+..++.++..
T Consensus 110 ~~~~e~l~~~~~~-~~~~~~~~p~~~~le~~~~~~l~~~~g~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~~ 188 (511)
T 3vp6_A 110 GLAGEWLTSTANT-NMFTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMA 188 (511)
T ss_dssp HHHHHHHHHHHCC-CSSCTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTHHHHHCGG
T ss_pred HHHHHHHHHHhcc-CCCCcccCchHHHHHHHHHHHHHHHhCCCCCCCceEECCchHHHHHHHHHHHHHHhhhhhhhcCcc
Confidence 3445666666654 334677777788999999999998887666667999999999999988877653
Q ss_pred --CCCEEEecCCCccchHHHHhhCCC---eEEEeeccCCCCcccCHHHHHHhhcCC------ceEEEEeCCCCCcccccC
Q 014603 133 --PGANILLPRPGFPYYEARATHSHL---EVRHFDLLPAKGWEVDLDAVEALADEN------TVALVIINPGNPCGNVYT 201 (422)
Q Consensus 133 --~gd~Vl~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~i~i~~p~nptG~~~~ 201 (422)
+++.|+++.++|+++...++..|. +++.++.+ .++.+|++.|++.++++ +++++++.|+|++|.+
T Consensus 189 ~~~~~~v~~s~~~H~s~~~~~~~~g~g~~~~~~v~~d--~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~v-- 264 (511)
T 3vp6_A 189 AVPKLVLFTSEQSHYSIKKAGAALGFGTDNVILIKCN--ERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAF-- 264 (511)
T ss_dssp GSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBC--TTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCB--
T ss_pred cCCCeEEEECCCchHHHHHHHHHcCCCCCcEEEeecC--CCCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCccc--
Confidence 467899999999999999999998 78888875 34679999999988654 7888999999999999
Q ss_pred HHHHHHHHHHHHHcCcEEEEcccccccccCCC-CCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchh
Q 014603 202 YQHLQKIAETAKKLGIMVIADEVYDHLAFGNT-PFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSG 280 (422)
Q Consensus 202 ~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~ 280 (422)
+++++|+++|++||+++++|++|+....... ....+.... .-.+++.+++|+++.| ..+|+++++++ +
T Consensus 265 -d~l~~I~~ia~~~~~~lhvD~a~~~~~~~~~~~~~~~~g~~--~aDsv~~~~hK~l~~p-~g~g~l~~~~~-------~ 333 (511)
T 3vp6_A 265 -DPIQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIE--RANSVTWNPHKMMGVL-LQCSAILVKEK-------G 333 (511)
T ss_dssp -CCHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGG--GCSEEEECTTSTTCCC-SCCEEEEESST-------T
T ss_pred -ccHHHHHHHHHHcCCEEEEEccchhhHhhChhhhhhccCCc--cCCEEEECcccccCCC-cCeEEEEEeCH-------H
Confidence 6799999999999999999999987543211 111111111 1126778999997655 56899988753 3
Q ss_pred HHHHHHhhh-hh-----------------cc-CcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCC
Q 014603 281 IVDSIKSFL-NI-----------------SS-DPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITC 341 (422)
Q Consensus 281 ~~~~~~~~~-~~-----------------~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 341 (422)
+........ .+ +. .........+..++......+++++.++..++.+++.+.|+++|++++
T Consensus 334 ~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~r~~~al~~~~al~~~g~~gl~~~~~~~~~~a~~l~~~L~~~pg~~l 413 (511)
T 3vp6_A 334 ILQGCNQMHASYLFQQDKHYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFEM 413 (511)
T ss_dssp HHHHHHCCCCTTTCCSSCSSCGGGCCGGGSSCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTEEE
T ss_pred HHHHHhccCCccccCcccccccccCccCCCCCCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 333321100 00 00 000111222233333334578899999999999999999999999885
Q ss_pred CC--CCCCceEEEEecCcccccCCC-C----------HHHHHHHHHHhcCeEEecCCC-CCCCCeEEEEec---cChHHH
Q 014603 342 PK--KPEGSMFVMVKLNYSLLEGIN-S----------DMEFALKLAKEESVIVLPGIT-VGLKDWLRITFA---VEPSAL 404 (422)
Q Consensus 342 ~~--~~~~g~~~~~~~~~~~~~~~~-~----------~~~~~~~l~~~~gi~v~~g~~-~~~~~~iRis~~---~~~~~l 404 (422)
.. .|..+.+.|...|.. ..+.. + ..++...|.++ |+.+..... .+..+++|++++ ++.++|
T Consensus 414 ~~~~~p~~~~v~f~~~p~~-~~~~~~~~~~~~~l~~~~~~l~~~L~~~-G~~~~~~~~~~~~~~~lRi~~~~~~~t~~di 491 (511)
T 3vp6_A 414 VFNGEPEHTNVCFWYIPQS-LRGVPDSPQRREKLHKVAPKIKALMMES-GTTMVGYQPQGDKANFFRMVISNPAATQSDI 491 (511)
T ss_dssp SSSSCCSSSCEEEEECCGG-GSSCCCCHHHHHHHHHHHHHHHHHHHHH-TSCEEEEEEETTEEEEEEECCCCTTCCHHHH
T ss_pred EecCCCCeEEEEEEEeCcc-ccccccchhHHHHHHHHHHHHHHHHHhc-CCEEEEEEEeCCceEEEEEEecCCCCCHHHH
Confidence 54 355555444333321 11000 0 12455555554 654433111 111347999984 678999
Q ss_pred HHHHHHHHHHHHHh
Q 014603 405 EDGLGRMKAFYDRH 418 (422)
Q Consensus 405 ~~~~~~l~~~~~~~ 418 (422)
+.+++.|++..+++
T Consensus 492 ~~ll~~i~~~~~~~ 505 (511)
T 3vp6_A 492 DFLIEEIERLGQDL 505 (511)
T ss_dssp HHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999876554
No 205
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.95 E-value=1.8e-25 Score=215.12 Aligned_cols=321 Identities=16% Similarity=0.162 Sum_probs=219.6
Q ss_pred CCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHH
Q 014603 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI 123 (422)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~ 123 (422)
+.++|+|+..+ ..+++.+++.+.+... .|.+..+..++|++++++++ . +++++++||++|+
T Consensus 30 ~~~~i~~~~~~--------~~~~~~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~g------~--~~~i~~~sGt~a~ 90 (437)
T 3bb8_A 30 GKSVVPPSGKV--------IGTKELQLMVEASLDG---WLTTGRFNDAFEKKLGEYLG------V--PYVLTTTSGSSAN 90 (437)
T ss_dssp TTSCBCSCCCC--------CCHHHHHHHHHHHHHC---CCBSCHHHHHHHHHHHHHHT------C--SEEEEESCHHHHH
T ss_pred CCccccCCCCC--------CCHHHHHHHHHHHHcC---CcCCChHHHHHHHHHHHHHC------C--CcEEEeCCHHHHH
Confidence 44456664332 3478888888887642 34455678999999999993 2 2688889999999
Q ss_pred HHHHHHh---------cCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeC-CC
Q 014603 124 EVILTVL---------ARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIIN-PG 193 (422)
Q Consensus 124 ~~~~~~l---------~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~-p~ 193 (422)
+.++.++ +++||+|+++.++|+++...+...|.+++.+++++ +++.+|++.+++.++++++++++++ ++
T Consensus 91 ~~al~~l~~~~~~~~~~~~gd~Vi~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~v~~~~~~g 169 (437)
T 3bb8_A 91 LLALTALTSPKLGVRALKPGDEVITVAAGFPTTVNPTIQNGLIPVFVDVDI-PTYNVNASLIEAAVSDKTKAIMIAHTLG 169 (437)
T ss_dssp HHHHHHTTCGGGGGGSCCTTCEEEECSSSCHHHHHHHHHTTCEEEECCEET-TTTEECGGGHHHHCCTTEEEEEEECGGG
T ss_pred HHHHHHhhhcccccccCCCcCEEEECCCCcHHHHHHHHHcCCEEEEEeccC-ccCCcCHHHHHHhcCCCCeEEEEeCCCC
Confidence 9999998 78999999999999999999999999999998864 3567899999999988899998885 44
Q ss_pred CCcccccCHHHHHHHHHHHHHcCcEEEEcccccccc-cCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCC
Q 014603 194 NPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLA-FGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDP 272 (422)
Q Consensus 194 nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~-~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~ 272 (422)
|| .++++|.++|+++|+++|+|++|+... +++ ..++...+ +++.||+|.++++|.+.|++++++
T Consensus 170 ~~-------~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~------~~~~~~~d-~~~~s~~~~k~l~~g~gg~~~~~~- 234 (437)
T 3bb8_A 170 NL-------FDLAEVRRVADKYNLWLIEDCCDALGSTYDG------KMAGTFGD-IGTVSFYPAKHITMGEGGAVFTQS- 234 (437)
T ss_dssp CC-------CCHHHHHHHHHHHTCEEEEECTTCTTCEETT------EETTSSSS-EEEEECSTTSSSCCSSCEEEEESC-
T ss_pred Ch-------hcHHHHHHHHHHcCCEEEEECccccCceECC------eecccccC-EEEEECcCCcCCCCCCeEEEEeCC-
Confidence 44 468899999999999999999998422 211 11221112 677888888888888999999863
Q ss_pred CCcccchhHHHHHHhhhhh----------------------------------------ccCcchHHHHHHHHHHhhchH
Q 014603 273 NGILQDSGIVDSIKSFLNI----------------------------------------SSDPATFIQGAVPQILEKTEE 312 (422)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~----------------------------------------~~~~~~~~~~a~~~~l~~~~~ 312 (422)
+.+...+...... ....+.+..+++...|+.
T Consensus 235 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l~~--- 305 (437)
T 3bb8_A 235 ------AELKSIIESFRDWGRDCYCAPGCDNTCKKRFGQQLGSLPFGYDHKYTYSHLGYNLKITDMQAACGLAQLER--- 305 (437)
T ss_dssp ------HHHHHHHHHHHBTTBCC----------------CCSCCCTTCCGGGCBCSCCCBCCCBHHHHHHHHHHHHH---
T ss_pred ------HHHHHHHHHHHHhCcccccccccccccccccccccccccccccccccccccCcccCCCHHHHHHHHHHHHH---
Confidence 2223322221100 001234444444455543
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC-C-----CCceEEE-EecCcccccCCCCHHHHHHHHHHhcCeEEecCC
Q 014603 313 EFFSKITDILRETADICCDRLKEIPCITCPKK-P-----EGSMFVM-VKLNYSLLEGINSDMEFALKLAKEESVIVLPGI 385 (422)
Q Consensus 313 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~-----~~g~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~ 385 (422)
+.+..++.+++.+++.+.|++++++..... + ....|.+ +..+. + .+..++...| .++||.+.++.
T Consensus 306 --~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~l~~~L-~~~GI~v~~~~ 377 (437)
T 3bb8_A 306 --IEEFVEKRKANFKYLKDALQSCADFIELPEATENSDPSWFGFPITLKEDS----G-VSRIDLVKFL-DEAKVGTRLLF 377 (437)
T ss_dssp --HHHHHHHHHHHHHHHHHHGGGGTTTEECCCCCTTEECCCSSEEEEECGGG----S-SCHHHHHHHH-HHTTBCCBCCT
T ss_pred --HHHHHHHHHHHHHHHHHHhhccCCccccCCCCCCCceeeEEEEEEECCcC----c-CcHHHHHHHH-HHCCCceeccC
Confidence 344555557778889999998876542211 1 1112332 33321 1 1456666666 55699998875
Q ss_pred CCCC------------------------CCeEEEEec--cChHHHHHHHHHHHHHHH
Q 014603 386 TVGL------------------------KDWLRITFA--VEPSALEDGLGRMKAFYD 416 (422)
Q Consensus 386 ~~~~------------------------~~~iRis~~--~~~~~l~~~~~~l~~~~~ 416 (422)
.... .+.+|++++ ++++|++++++.|+++++
T Consensus 378 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~~di~~i~~~l~~~~~ 434 (437)
T 3bb8_A 378 AGNLTRQPYFHDVKYRVVGELTNTDRIMNQTFWIGIYPGLTHDHLDYVVSKFEEFFG 434 (437)
T ss_dssp TSSGGGSGGGSSCCCEECSCCHHHHHHHHHEEEECCSTTCCHHHHHHHHHHHHHHTT
T ss_pred CcccccCchhhccCccccCCCcHHHHHhcCEEEecCCCCCCHHHHHHHHHHHHHHHc
Confidence 4110 124899987 789999999999988764
No 206
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.95 E-value=8.6e-26 Score=214.46 Aligned_cols=214 Identities=12% Similarity=0.124 Sum_probs=158.2
Q ss_pred CCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHH----hhCCCeEEEee
Q 014603 87 VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARA----THSHLEVRHFD 162 (422)
Q Consensus 87 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~----~~~g~~~~~~~ 162 (422)
+...++|+.+|++++ .+.+++++||++|++.++.+++++||+|+++.+.|++....+ +..|+++..++
T Consensus 82 p~~~~le~~lA~l~g--------~~~~i~~ssGt~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~l~~~G~~v~~v~ 153 (415)
T 2fq6_A 82 LTHFSLQQAMCELEG--------GAGCVLFPCGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCSKILSKLGVTTSWFD 153 (415)
T ss_dssp HHHHHHHHHHHHHHT--------CSEEEEESSHHHHHHHHHHTTCCTTCEEEEETTSCHHHHHHHHHTGGGGTCEEEEEC
T ss_pred chHHHHHHHHHHHhC--------CCeEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEEC
Confidence 346789999999983 235777789999999999999999999999999998776443 45688888775
Q ss_pred ccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHH--cCcEEEEcccccccccCCCCCCCccc
Q 014603 163 LLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKK--LGIMVIADEVYDHLAFGNTPFVPMGV 240 (422)
Q Consensus 163 ~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~--~~~~li~D~~~~~~~~~~~~~~~~~~ 240 (422)
. .|+++|+++++++++++++++|+||+|.+++ +++|+++|++ +|+++|+|++|+.... ..++ .
T Consensus 154 ~-------~d~~~le~ai~~~tklV~~e~~~NptG~v~d---l~~I~~la~~~~~g~~livD~a~a~~~~----~~p~-~ 218 (415)
T 2fq6_A 154 P-------LIGADIVKHLQPNTKIVFLESPGSITMEVHD---VPAIVAAVRSVVPDAIIMIDNTWAAGVL----FKAL-D 218 (415)
T ss_dssp T-------TCGGGGGGGCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHCTTCEEEEECTTTTTTS----SCGG-G
T ss_pred C-------CCHHHHHHhhccCCcEEEEECCCCCCCEeec---HHHHHHHHHhhcCCCEEEEECCCccccc----CCcc-c
Confidence 4 2788999999989999999999999999974 7888999999 9999999999975321 1122 2
Q ss_pred cCCCCCeEEEecCccccCCCCce-eEEEEeeCCCCcccchhHHHHHHhhhhhc-cCcchHHHHHHHHHHhhchHHHHHHH
Q 014603 241 FGSIVPVLTLGSISKRWIVPGWR-LGWLVTSDPNGILQDSGIVDSIKSFLNIS-SDPATFIQGAVPQILEKTEEEFFSKI 318 (422)
Q Consensus 241 ~~~~~~~i~i~s~sK~~~~~G~r-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~ 318 (422)
++. .+++.|++|.++++|.+ .|++++++ ++++++....... ...++...+++...++. +..+
T Consensus 219 ~g~---Div~~S~sK~lg~~g~~~~G~l~~~~--------~~~~~l~~~~~~~G~~~~~~~a~~~~~~l~~-----l~~r 282 (415)
T 2fq6_A 219 FGI---DVSIQAATKYLVGHSDAMIGTAVCNA--------RCWEQLRENAYLMGQMVDADTAYITSRGLRT-----LGVR 282 (415)
T ss_dssp GTC---SEEEEETTTTTTCSSSCCCEEEEECT--------TTHHHHHHHHHHTTCCCCHHHHHHHHHHHHH-----HHHH
T ss_pred cCC---eEEEEeCccccCCCCCceEEEEEeCH--------HHHHHHHHHHHhcCCCCCHHHHHHHHhhhhH-----HHHH
Confidence 333 38999999999888765 58888753 3556665544322 23344444444444432 4555
Q ss_pred HHHHHHHHHHHHHHhhcCCCC
Q 014603 319 TDILRETADICCDRLKEIPCI 339 (422)
Q Consensus 319 ~~~~~~~~~~l~~~L~~~~~~ 339 (422)
.++..++.+.+.+.|++.|.+
T Consensus 283 ~~~~~~n~~~l~~~L~~~~~v 303 (415)
T 2fq6_A 283 LRQHHESSLKVAEWLAEHPQV 303 (415)
T ss_dssp HHHHHHHHHHHHHHHHTCTTE
T ss_pred HHHHHHHHHHHHHHHHcCCCe
Confidence 666677788888888876543
No 207
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.95 E-value=2.6e-26 Score=223.88 Aligned_cols=332 Identities=10% Similarity=0.034 Sum_probs=226.9
Q ss_pred cHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCC-------CCCEEEecCHHHHHHHHHHHhcCC---
Q 014603 64 ASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLS-------PDDVYLTLGCTQAIEVILTVLARP--- 133 (422)
Q Consensus 64 ~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~-------~~~i~~~~g~~~a~~~~~~~l~~~--- 133 (422)
+..+.+++...++. ....|....+..++++.+++++.+.+|.+.. ...+++|+|+|+|+..++.++..+
T Consensus 87 ~~~~~~~~~~~~n~-~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~~~~~~ 165 (486)
T 1js3_A 87 PAMLADMLCGAIGC-IGFSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVR 165 (486)
T ss_dssp HHHHHHHHHHHHCC-CCSSGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCc-CccccccChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHHHHHhh
Confidence 44577777777644 3345665556789999999999887775532 246899999999999888765321
Q ss_pred ------CC--------E--EEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCc------eEEEEeC
Q 014603 134 ------GA--------N--ILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENT------VALVIIN 191 (422)
Q Consensus 134 ------gd--------~--Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~------~~i~i~~ 191 (422)
|| + |+++.++|+++...++..|++++.++.+ .++.+|++.|++.+++++ .++++++
T Consensus 166 ~~~~~~gd~~~~~~~~~~~v~~s~~~h~s~~~~~~~~G~~v~~v~~d--~~~~~d~~~L~~~i~~~~~~g~~p~~vv~~~ 243 (486)
T 1js3_A 166 RLQAASPGLTQGAVLEKLVAYASDQAHSSVERAGLIGGVKLKAIPSD--GKFAMRASALQEALERDKAAGLIPFFVVATL 243 (486)
T ss_dssp HHHHHSTTCCHHHHHHHEEEEEETTCCHHHHHHHHHHTCEEEEECCC--TTSCCCHHHHHHHHHHHHHTTCEEEEEEEEB
T ss_pred hhhccCccchhcccCCCEEEEECCCCcHHHHHHHHhCCCceEEeecC--CCCCCCHHHHHHHHHHHHhCCCCceEEEEeC
Confidence 32 3 7889999999999999999999999874 467899999999887654 3788999
Q ss_pred CCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCC-ccccCCCCCeEEEecCccccCCCCceeEEEEee
Q 014603 192 PGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVP-MGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTS 270 (422)
Q Consensus 192 p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~-~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~ 270 (422)
|+||||.+ +++++|+++|+++|+++++|++|+.+.+....... +..+... + .++.++||++++| +++|+++++
T Consensus 244 ~~n~tG~~---~~l~~I~~la~~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~~a-d-si~~~~hK~~~~p-~~~G~l~~~ 317 (486)
T 1js3_A 244 GTTSCCSF---DNLLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEFA-D-SFNFNPHKWLLVN-FDCSAMWVK 317 (486)
T ss_dssp SCTTTCCB---CCHHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGGGC-S-EEEECHHHHSSCC-SSCEEEEES
T ss_pred CCCCCCCC---CCHHHHHHHHHHcCCEEEEehhhHHHHHHCHHHHHHhcCcccc-C-eeEEchhhhcCCC-cceEEEEEe
Confidence 99999988 78999999999999999999999875432111111 1112111 2 5567899997665 789999997
Q ss_pred CCCCcccchhH-HHHHH---hhhhh------------------ccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHH
Q 014603 271 DPNGILQDSGI-VDSIK---SFLNI------------------SSDPATFIQGAVPQILEKTEEEFFSKITDILRETADI 328 (422)
Q Consensus 271 ~~~~~~~~~~~-~~~~~---~~~~~------------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~ 328 (422)
++ .. .+.+. .+... +.....+.++++...+ ...++.+..++..+++++
T Consensus 318 ~~-------~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~~~~~~~al~~~---g~~g~~~~~~~~~~~a~~ 387 (486)
T 1js3_A 318 RR-------TDLTGAFKLDPVYLKHSHQGSGLITDYRHWQLPLGRRFRSLKMWFVFRMY---GVKGLQAYIRKHVQLSHE 387 (486)
T ss_dssp CH-------HHHHGGGC------------CCSCCCGGGSSSCSCCCCTHHHHHHHHHHH---HHHHHHHHHHHHHHHHHH
T ss_pred CH-------HHHHHHhcCCchhhCCCcccccCCCCccccCCCCCCchhHHHHHHHHHHH---hHHHHHHHHHHHHHHHHH
Confidence 52 22 22221 00000 0011223444444433 346788889999999999
Q ss_pred HHHHhhcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec---cChHHHH
Q 014603 329 CCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA---VEPSALE 405 (422)
Q Consensus 329 l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~---~~~~~l~ 405 (422)
+.+.|+++|++.+...|..+.+ .++++... ....++...+.++ |+.+.++..+...+++|++++ +++++++
T Consensus 388 l~~~L~~~~~~~~~~~~~~~~v-~f~~~~~~----~~~~~l~~~L~~~-g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~ 461 (486)
T 1js3_A 388 FEAFVLQDPRFEVCAEVTLGLV-CFRLKGSD----GLNEALLERINSA-RKIHLVPCRLRGQFVLRFAICSRKVESGHVR 461 (486)
T ss_dssp HHHHHHHCTTEEECSCCCSSEE-EEEESSCH----HHHHHHHHHHHHH-TSCBCEEEEETTEEEEEEECCCTTCCHHHHH
T ss_pred HHHHHhcCCCeEEeCCCceeEE-EEEecChH----HHHHHHHHHHHhc-CCEEEEEEEECCEEEEEEEeCCCCCCHHHHH
Confidence 9999999988885434554444 34554210 0135566666544 654433333444678999985 5789999
Q ss_pred HHHHHHHHHHHHhcc
Q 014603 406 DGLGRMKAFYDRHAK 420 (422)
Q Consensus 406 ~~~~~l~~~~~~~~~ 420 (422)
+++++|+++++++.+
T Consensus 462 ~~~~~l~~~~~~~~~ 476 (486)
T 1js3_A 462 LAWEHIRGLAAELLA 476 (486)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999877643
No 208
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.94 E-value=9.8e-27 Score=224.74 Aligned_cols=296 Identities=12% Similarity=0.091 Sum_probs=198.0
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCEEEecCHH-HHHHHHHHHhcC--CCCEEEecCCCccchHHHHhhCCCeEEEeeccC-
Q 014603 90 LPARRAIADYLNRDLPYKLSPDDVYLTLGCT-QAIEVILTVLAR--PGANILLPRPGFPYYEARATHSHLEVRHFDLLP- 165 (422)
Q Consensus 90 ~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~-~a~~~~~~~l~~--~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~- 165 (422)
.++++.+.+++.+.+| .+++ +++|+|+| .++..++.++.. +|+.|++++++|+.+...++..|++++.++..+
T Consensus 132 ~~~~~~~~~~la~~~g--~~~~-~~~t~g~te~a~~~al~~~~~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~~~ 208 (456)
T 2z67_A 132 YALTNKILESFFKQLG--LNVH-AIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPIKAVSFVGMNMRLVETVLD 208 (456)
T ss_dssp HHHHHHHHHHHHHHTT--CCCE-EEEESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHTTCEEEEECCEEE
T ss_pred HHHHHHHHHHHHHHcC--CCCC-EEEeCcHHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHHHHcCCCceEEEEecc
Confidence 3444445555554444 3444 99999999 455545555433 678899999999999999999999998888643
Q ss_pred CCCcccCHHHHHHhh-c----CCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccc
Q 014603 166 AKGWEVDLDAVEALA-D----ENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGV 240 (422)
Q Consensus 166 ~~~~~~d~~~l~~~~-~----~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~ 240 (422)
++++.+|++.|++.+ + .++.++++++|+||||.+ +++++|.++|+++|+++++|++|+....+ ..+.....
T Consensus 209 ~~~~~~d~~~l~~~i~~~~~~~~~~~vv~~~~nn~tG~i---~~l~~I~~la~~~g~~v~vD~A~~~~~~g-~~~~~~~~ 284 (456)
T 2z67_A 209 GDRVYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNS---DDIVEIAKICENYDIPHIINGAYAIQNNY-YLEKLKKA 284 (456)
T ss_dssp TTEEECCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCC---CCHHHHHHHHHHHTCCEEEECTTTTTCHH-HHHHHHHH
T ss_pred CCCCCcCHHHHHHHHHHHhhCCCeEEEEEeCCCCCCCCc---CCHHHHHHHHHHcCCcEEEECcchHHHHH-hhHHHHHh
Confidence 345789999999988 4 366777889999999999 56888889999999999999998764431 10111111
Q ss_pred c--CCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhhhcc-CcchHHHHHHHHHHhhchHHHHHH
Q 014603 241 F--GSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISS-DPATFIQGAVPQILEKTEEEFFSK 317 (422)
Q Consensus 241 ~--~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~a~~~~l~~~~~~~~~~ 317 (422)
+ ..| +++.|++|++ ..+.++|++++++ +++++.+........ ..+.+.+.++...+ ...++++
T Consensus 285 ~~~~~D---~~~~s~hK~~-~~p~g~G~l~~~~-------~~~~~~l~~~~~g~~~~~~~~~~~aal~~l---~~~~~~~ 350 (456)
T 2z67_A 285 FKYRVD---AVVSSSDKNL-LTPIGGGLVYSTD-------AEFIKEISLSYPGRASATPVVNTLVSLLSM---GSKNYLE 350 (456)
T ss_dssp HTSCCS---EEEEEHHHHH-CCCSSCEEEEESC-------HHHHHHHHTTSCSCBCSHHHHHHHHHHHHH---HHHHHHH
T ss_pred hCCCCC---EEEEcCCCCc-CCCCCeEEEEEcC-------HHHHhhcCcCCCCCCCCCHHHHHHHHHHHH---HHHHHHH
Confidence 2 222 6788999974 4557899999853 456666643322111 11223333333333 3467888
Q ss_pred HHHHHHHHHHHHHHHhhcCC---CCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCe---EEe------cCC
Q 014603 318 ITDILRETADICCDRLKEIP---CITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESV---IVL------PGI 385 (422)
Q Consensus 318 ~~~~~~~~~~~l~~~L~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi---~v~------~g~ 385 (422)
..++..++++++.+.|++++ ++. +..|. .++++.+... + ...++...|. ++|+ .+. +|.
T Consensus 351 ~~~~~~~~~~~l~~~L~~~~~~~g~~-v~~~~--~~v~~~~~~~---~--~~~~l~~~L~-~~gi~~~rv~~~~g~f~G~ 421 (456)
T 2z67_A 351 LVKNQKNSKKLLDELLNDLSKKTGGK-FLDVE--SPIASCISVN---S--DPVEIAAKLY-NLRVTGPRGIKKTDHFGNC 421 (456)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSSCC-BCCCC--CSSEEEEECS---S--CHHHHHHHHH-HTTEESCEEECTTCHHHHT
T ss_pred HHHHHHHHHHHHHHHHHhcccccCCE-ecCCC--CeEEEEEecc---c--HHHHHHHHHH-HcCCCcceEEeecCccccc
Confidence 89999999999999999885 665 33455 3445555111 0 1356666664 4464 443 133
Q ss_pred CCCC--CCeEEEEec--cChHHHHHHHHHHHHHH
Q 014603 386 TVGL--KDWLRITFA--VEPSALEDGLGRMKAFY 415 (422)
Q Consensus 386 ~~~~--~~~iRis~~--~~~~~l~~~~~~l~~~~ 415 (422)
.|.. .+++|++++ ++++++++++++|++++
T Consensus 422 ~~~~~~~~~vr~s~~~~~t~eeid~~l~~L~~~~ 455 (456)
T 2z67_A 422 YLGTYTHDYIVMNAAIGVRTEDIVNSVSKLEKIL 455 (456)
T ss_dssp CSSCCSCCEEEEECCTTCCHHHHHHHHHHHHTC-
T ss_pred cccccCcchhhhhhhcCCCHHHHHHHHHHHHHHh
Confidence 3322 479999998 78999999999998754
No 209
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.94 E-value=4.6e-26 Score=220.68 Aligned_cols=342 Identities=11% Similarity=0.025 Sum_probs=222.8
Q ss_pred cCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCC---CCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecC
Q 014603 42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSA---RFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLG 118 (422)
Q Consensus 42 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~---~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g 118 (422)
.+|+.+|||..|......+ ..+|.+.+++.+++... ....|+. ....++++++++.+.+..+ ...+.+++++|
T Consensus 60 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~A~~~~~~~~~~~~~~~~~~-~~~~~l~~~la~~l~~~~~--~~~~~v~f~~s 135 (472)
T 1ohv_A 60 VDGNRMLDLYSQISSIPIG-YSHPALVKLVQQPQNVSTFINRPALGI-LPPENFVEKLRESLLSVAP--KGMSQLITMAC 135 (472)
T ss_dssp TTSCEEEESSHHHHTCSSC-BTCHHHHHHHHCGGGHHHHHCCCCTTT-SCBTTHHHHHHHTGGGGCC--TTCCEEEEESS
T ss_pred CCCCEEEECCCCHhhcccC-CCCHHHHHHHHHHHhhccccccccccc-ccHHHHHHHHHHHHHHhCC--CCcCEEEEeCC
Confidence 3588899999887653233 36899999999886421 1113433 3357899999997766443 35679999999
Q ss_pred HHHHHHHHHHHhc--------C-----------------CC---CEEEecCCCccchHHHHh-hCCCeE-----------
Q 014603 119 CTQAIEVILTVLA--------R-----------------PG---ANILLPRPGFPYYEARAT-HSHLEV----------- 158 (422)
Q Consensus 119 ~~~a~~~~~~~l~--------~-----------------~g---d~Vl~~~~~~~~~~~~~~-~~g~~~----------- 158 (422)
|++|++.+++.+. . +| ++|++.+++||++...+. ..+...
T Consensus 136 GseA~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~~~~~~~g~~~~~~~~~~~~~~ 215 (472)
T 1ohv_A 136 GSCSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDW 215 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHHCCSCHHHHTTSCCCCC
T ss_pred chhHHHHHHHHHHHHhhhhccCcccccccccccccccccccCCCCeEEEECCCcccccHHHHhcCCCccccccCCCCCCC
Confidence 9999999998763 1 45 899999999998765543 223211
Q ss_pred EEeeccCC--C---C--c-----ccCHHHHHHhhcC------CceEEEEeCCCCCccc-ccCHHHHHHHHHHHHHcCcEE
Q 014603 159 RHFDLLPA--K---G--W-----EVDLDAVEALADE------NTVALVIINPGNPCGN-VYTYQHLQKIAETAKKLGIMV 219 (422)
Q Consensus 159 ~~~~~~~~--~---~--~-----~~d~~~l~~~~~~------~~~~i~i~~p~nptG~-~~~~~~l~~i~~~~~~~~~~l 219 (422)
..+++... . . + ..|++.|++.+++ +++++++...+|++|. .++.+.+++|.++|++||+++
T Consensus 216 ~~~~~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~ll 295 (472)
T 1ohv_A 216 PIAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAF 295 (472)
T ss_dssp CEECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEE
T ss_pred cccCCCcccCccccccccchhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEE
Confidence 11121100 0 0 0 1267888888765 5666655555788996 578999999999999999999
Q ss_pred EEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhh-hhccCcchH
Q 014603 220 IADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL-NISSDPATF 298 (422)
Q Consensus 220 i~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 298 (422)
|+||+|+++.+.|.. ..+..++.. ..+.+.||||.+ +.| |+++ + +++. .+.... ..+.+.+++
T Consensus 296 i~DEv~~g~g~~g~~-~~~~~~gv~-~~~Di~t~sK~~-l~G---G~~~-~--------~~~~-~~~~~~~~~T~~~~~~ 359 (472)
T 1ohv_A 296 LVDEVQTGGGSTGKF-WAHEHWGLD-DPADVMTFSKKM-MTG---GFFH-K--------EEFR-PNAPYRIFNTWLGDPS 359 (472)
T ss_dssp EEECTTTTTTTTSSS-SGGGGGCCS-SCCSEEEECGGG-SSE---EEEE-C--------GGGS-CSSSSSSCCSSSSCHH
T ss_pred EEeCcccCCCCCCCc-hhccccCCC-CCCCEEEEcccc-ccC---CccC-c--------hhhc-ccccccccCccCccHH
Confidence 999999977665532 233333321 001244788985 344 6765 3 1221 111111 223466888
Q ss_pred HHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcC----CC-CCCCCCCCCceEEEEecCcccccCCCCHHHHHHHH
Q 014603 299 IQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEI----PC-ITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKL 373 (422)
Q Consensus 299 ~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l 373 (422)
+++++.++|+...+ +...++++++++++++.|+++ |. +. ...+. |.++++.++... ...++...+
T Consensus 360 ~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~v~-~~~~~-g~~~~~~~~~~~-----~~~~~~~~l 429 (472)
T 1ohv_A 360 KNLLLAEVINIIKR---EDLLSNAAHAGKVLLTGLLDLQARYPQFIS-RVRGR-GTFCSFDTPDES-----IRNKLISIA 429 (472)
T ss_dssp HHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHHHCTTTCE-EEEEE-TTEEEEECSSHH-----HHHHHHHHH
T ss_pred HHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHhhCCCcEE-eecCC-ceEEEEEeCChh-----HHHHHHHHH
Confidence 99988888875322 234566777777777777653 32 22 11233 567777765310 245666666
Q ss_pred HHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHHHHHHHHHh
Q 014603 374 AKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 374 ~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~l~~~~~~~ 418 (422)
+ ++||.+.|+. .+++|++++ +++++|++++++|+++++++
T Consensus 430 ~-~~Gv~~~~~g----~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~~ 471 (472)
T 1ohv_A 430 R-NKGVMLGGCG----DKSIRFRPTLVFRDHHAHLFLNIFSDILADF 471 (472)
T ss_dssp H-HTTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHHHHHTC
T ss_pred H-HCCeEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 5 5699999853 578999876 78999999999999998753
No 210
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.90 E-value=6e-29 Score=237.91 Aligned_cols=334 Identities=13% Similarity=0.076 Sum_probs=223.9
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 122 (422)
+|+.+|||..|......+ ..+|.|.+++.+++.......|+ .....++.+++++++ + ..+.+++++||++|
T Consensus 98 dG~~yiD~~~~~~~~~lG-h~~p~V~~Av~~q~~~~~~~~~~-~~~~~~Lae~L~~~~------p-~~~~v~~~nSGseA 168 (465)
T 2yky_A 98 DGHAYVNFLGEYTAGLFG-HSHPVIRAAVERALAVGLNLSTQ-TENEALFAEAVCDRF------P-SIDLVRFTNSGTEA 168 (465)
Confidence 688999999988543222 35789999999998774333443 334567777777776 2 45789999999999
Q ss_pred HHHHHHHhc--CCCCEEEecCCCccchHHHHh----hCCC--eEEEeeccCCCCcccCHHHHHHhhc---CCceEEEEeC
Q 014603 123 IEVILTVLA--RPGANILLPRPGFPYYEARAT----HSHL--EVRHFDLLPAKGWEVDLDAVEALAD---ENTVALVIIN 191 (422)
Q Consensus 123 ~~~~~~~l~--~~gd~Vl~~~~~~~~~~~~~~----~~g~--~~~~~~~~~~~~~~~d~~~l~~~~~---~~~~~i~i~~ 191 (422)
+..+++... ..+++|++.+++|+++...+. ..|. .+..++ + -|++.|++.++ +++++++ ++
T Consensus 169 ~~~Aik~ar~~tgr~~ii~~~~~yHG~~~~~~sg~~~~g~~~~~~~~~------~-~d~~~l~~~l~~~~~~~aavi-~e 240 (465)
T 2yky_A 169 NLMALATATAITGRKTVLAFDGGYHGGLLNFASGHAPTNAPYHVVLGV------Y-NDVEGTADLLKRHGHDCAAIL-VE 240 (465)
Confidence 999998753 345899999999998765443 1122 112221 1 27788888886 4555555 45
Q ss_pred C-CCCcccc-cCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEe
Q 014603 192 P-GNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVT 269 (422)
Q Consensus 192 p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~ 269 (422)
| ++++|.+ .+.+++++|.++|+++|+++|+||+|+ + ..|.. .....++.. ..+.||||.+++ |+|+||+++
T Consensus 241 pv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~-r~g~~-~a~~~~gv~---pDi~t~sK~lg~-G~piG~v~~ 313 (465)
T 2yky_A 241 PMLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-S-RLSGG-GAQEMLGIS---ADLTTLGKYIGG-GMSFGAFGG 313 (465)
Confidence 5 5669964 567889999999999999999999999 6 33321 122222221 235589999865 999999998
Q ss_pred eCCCCcccchhHHHHHHh------hhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCC---CCC
Q 014603 270 SDPNGILQDSGIVDSIKS------FLNISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIP---CIT 340 (422)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~---~~~ 340 (422)
+ +++++.+.. ....+.+.++++++++.++|+...+ +...++++++.+++++.|+++. ++.
T Consensus 314 ~--------~~i~~~l~~~~~g~~~~~~T~~~npla~aAa~aaL~~l~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 382 (465)
T 2yky_A 314 R--------RDLMERFDPARDGAFAHAGTFNNNILTMSAGHAALTQIYT---RQAASDLSASGDRFRANLNRIAVENQAP 382 (465)
Confidence 6 357777665 1234457788999999888876432 2345566666666666665541 222
Q ss_pred CCCCCCCceEEEEecCcccc---c-----CCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEeccChHHHHHHHHHHH
Q 014603 341 CPKKPEGSMFVMVKLNYSLL---E-----GINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALEDGLGRMK 412 (422)
Q Consensus 341 ~~~~~~~g~~~~~~~~~~~~---~-----~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~l~~~~~~l~ 412 (422)
...+..|.++++.++.... . ......++...++ ++||++.|+.. . . +++.++++++++++++|+
T Consensus 383 -~~v~g~G~~~~i~~~~~~~~~~~~~~~~d~~~~~~~~~~ll-~~GV~v~p~~~-~--~---~s~~~t~edid~~l~~l~ 454 (465)
T 2yky_A 383 -LQFTGLGSLGTIHFSRAPIRSAGDVRAADQQLKELFFFHML-RKGIYLAPRGM-Y--A---LSLEIADAGRDAFAEALA 454 (465)
Confidence 2234567788887753100 0 0001334555554 57999998762 2 1 677789999999999999
Q ss_pred HHHHHhc
Q 014603 413 AFYDRHA 419 (422)
Q Consensus 413 ~~~~~~~ 419 (422)
++++++.
T Consensus 455 ~~l~~~~ 461 (465)
T 2yky_A 455 DFIGEQR 461 (465)
Confidence 9987753
No 211
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.94 E-value=6.5e-25 Score=211.19 Aligned_cols=345 Identities=13% Similarity=0.064 Sum_probs=210.3
Q ss_pred CceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCC------CCCCHHHHHHHHHHHhhcCCCCCCCCC---EEEe
Q 014603 46 PLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSS------TVGILPARRAIADYLNRDLPYKLSPDD---VYLT 116 (422)
Q Consensus 46 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~------~~g~~~lr~~ia~~l~~~~~~~~~~~~---i~~~ 116 (422)
..|.|-.+. + .++|.|++++...+.+.....|+. .....++++...+.+.+.+| .+.+. .+++
T Consensus 55 ~~i~lias~-----n-~~~~~V~eA~~~~l~~~y~~G~~g~r~~~G~~~~~~lE~~a~~~~a~l~g--~~~~~~~~~v~~ 126 (490)
T 2a7v_A 55 RGLELIASE-----N-FCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFD--LDPAQWGVNVQP 126 (490)
T ss_dssp HSEECCTTC-----C-CCCHHHHHHHTSGGGTCCCCC------------CTHHHHHHHHHHHHHTT--CCTTTEEEECCC
T ss_pred cCceEECCC-----C-CCCHHHHHHHHHHHcCCCccCCCcccccCccHHHHHHHHHHHHHHHHHcC--CCcccCceEEeC
Confidence 456665432 3 368999999998876543223332 12234677333333333333 34432 3556
Q ss_pred cCHHHHHHHHHHHhcCCCCEEEecCCCccchHH--------HHhhCCCeE--EEeeccCCCCcccCHHHHHHhhc-CCce
Q 014603 117 LGCTQAIEVILTVLARPGANILLPRPGFPYYEA--------RATHSHLEV--RHFDLLPAKGWEVDLDAVEALAD-ENTV 185 (422)
Q Consensus 117 ~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~--------~~~~~g~~~--~~~~~~~~~~~~~d~~~l~~~~~-~~~~ 185 (422)
+||++|+..++.++++|||+|+++++.|.++.. .+...|..+ +.+++++ +++.+|++++++.+. .+++
T Consensus 127 ~sGt~An~~al~al~~pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~~vd~-~~~~iD~d~le~~l~~~~~k 205 (490)
T 2a7v_A 127 YSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNP-KTGLIDYNQLALTARLFRPR 205 (490)
T ss_dssp SSHHHHHHHHHHHHCCSCEECCC-------------------------------CCBCT-TTCSBCHHHHHHHHHHHCCS
T ss_pred CchHHHHHHHHHHHcCCCCEecccCccccccccchhhhcchhHHHcCCeEEEEeccccc-ccCCcCHHHHHHHHhhcCCc
Confidence 688999999999999999999999998865321 223445433 3444433 346799999999875 3678
Q ss_pred EEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEccccc-ccccCCCCCCCccccCCCCCeEEEecCccccCCCCcee
Q 014603 186 ALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYD-HLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRL 264 (422)
Q Consensus 186 ~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~-~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~ 264 (422)
+++++.++||+ . .++++|.++|+++|+++++|++|. ++.+.|..+.++. ..+ +++.|+||++ .|+|.
T Consensus 206 lIi~~~s~~~~--~---~dl~~i~~ia~~~g~~livD~Ah~~glv~~g~~~~~~~--~aD---iv~~S~hK~l--~Gp~G 273 (490)
T 2a7v_A 206 LIIAGTSAYAR--L---IDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFK--HAD---IVTTTTHKTL--RGARS 273 (490)
T ss_dssp EEEECCSSCCS--C---CCHHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGGG--TCS---EEEEESSGGG--CSCSC
T ss_pred EEEEcCCCCCC--c---ccHHHHHHHHHHcCCEEEEccccccccccCCcCCCCCC--CCC---EEEECCcccC--ccccc
Confidence 88888888875 3 258899999999999999999975 3333343333332 122 8889999986 45667
Q ss_pred EEEEeeCCCCccc-------chhHHHHHHhhhh--hccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhc
Q 014603 265 GWLVTSDPNGILQ-------DSGIVDSIKSFLN--ISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKE 335 (422)
Q Consensus 265 G~~~~~~~~~~~~-------~~~~~~~~~~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 335 (422)
|++++++.-...+ ..++.++++.... ..++++....+++..++.......+++..+++.++++.+.+.|++
T Consensus 274 G~i~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~g~qggp~~~~iaAla~Al~~~~~~~~~~~~~~~~~na~~L~~~L~~ 353 (490)
T 2a7v_A 274 GLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLE 353 (490)
T ss_dssp EEEEEECSEEEEETTTEEEEECCCHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hheeeccchhcccccccchhhHHHHHHHHHHhcccCCCCchHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999875200000 0024455554432 224556555666666665433234577888999999999999998
Q ss_pred CCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCC-----CCCeEEEEec------cChHHH
Q 014603 336 IPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVG-----LKDWLRITFA------VEPSAL 404 (422)
Q Consensus 336 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~-----~~~~iRis~~------~~~~~l 404 (422)
. |+.+...+....++|+.+.... .+..+ +..++++.||.+..+..++ ....+|++.. .+++++
T Consensus 354 ~-G~~v~~~~t~t~lv~vdl~~~g----~~~~~-~~~~L~~~GI~v~~~~~p~d~~p~~~~~iRig~~a~t~~g~~~~d~ 427 (490)
T 2a7v_A 354 R-GYSLVSGGTDNHLVLVDLRPKG----LDGAR-AERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDF 427 (490)
T ss_dssp T-TCEEGGGSCSSSEEEEECTTTT----CCHHH-HHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHH
T ss_pred c-CcEEecCCCCCeEEEEEeCCCC----CCHHH-HHHHHHhCCeEEecCccCCCCCCCCCCceEecccccccCCCCHHHH
Confidence 7 7774322334567888875421 13444 4555678899998543332 2578999773 468999
Q ss_pred HHHHHHHHHHHHH
Q 014603 405 EDGLGRMKAFYDR 417 (422)
Q Consensus 405 ~~~~~~l~~~~~~ 417 (422)
+++++.|.+++..
T Consensus 428 ~~~~~~i~~~l~~ 440 (490)
T 2a7v_A 428 RRVVDFIDEGVNI 440 (490)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 9999999988764
No 212
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.94 E-value=1.1e-24 Score=206.01 Aligned_cols=283 Identities=17% Similarity=0.146 Sum_probs=197.0
Q ss_pred CCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHH-----hhCCCeEEEee
Q 014603 88 GILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARA-----THSHLEVRHFD 162 (422)
Q Consensus 88 g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~-----~~~g~~~~~~~ 162 (422)
...++++.++++.+ .+.+++++||++|+.. +..++++||+|+++.++|++....+ ...|.+++.++
T Consensus 68 ~~~~l~~~la~l~g--------~~~~~~~~sG~~Ai~~-~~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~ 138 (400)
T 3nmy_A 68 TRFAYERCVAALEG--------GTRAFAFASGMAATST-VMELLDAGSHVVAMDDLYGGTFRLFERVRRRTAGLDFSFVD 138 (400)
T ss_dssp HHHHHHHHHHHHHT--------CSEEEEESSHHHHHHH-HHTTSCTTCEEEEESSCCHHHHHHHHHTHHHHHCCEEEEEC
T ss_pred HHHHHHHHHHHHhC--------CCCEEEecCHHHHHHH-HHHHcCCCCEEEEeCCCchHHHHHHHHhhHhhcCeEEEEEC
Confidence 35678888888872 2367888888999998 5678899999999999998655543 33588888876
Q ss_pred ccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccC
Q 014603 163 LLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG 242 (422)
Q Consensus 163 ~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~ 242 (422)
.+ |++.+++.++++++++++++|+||+|.+++ +++|+++|+++|+++|+|++|+...+. .++ .++
T Consensus 139 ~~-------d~~~l~~~i~~~~~~v~~e~~~np~G~~~~---l~~i~~la~~~g~~livDe~~~~~~~~----~~~-~~g 203 (400)
T 3nmy_A 139 LT-------DPAAFKAAIRADTKMVWIETPTNPMLKLVD---IAAIAVIARKHGLLTVVDNTFASPMLQ----RPL-SLG 203 (400)
T ss_dssp TT-------SHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTHHHHC----CGG-GGT
T ss_pred CC-------CHHHHHHHhccCCCEEEEECCCCCCCeeec---HHHHHHHHHHcCCEEEEECCCcccccC----Chh-hcC
Confidence 42 789999999989999999999999999975 888999999999999999999753221 111 223
Q ss_pred CCCCeEEEecCccccCCCCceeEE--EEeeCCCCcccchhHHHHHHhhhh-hccCcchHHHHHHHHHHhhchHHHHHHHH
Q 014603 243 SIVPVLTLGSISKRWIVPGWRLGW--LVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQGAVPQILEKTEEEFFSKIT 319 (422)
Q Consensus 243 ~~~~~i~i~s~sK~~~~~G~r~G~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~ 319 (422)
. .+++.|++|.++++|.++|. ++..+ +++.+++..... .....++..++++...++. +..+.
T Consensus 204 ~---div~~S~sK~l~g~g~~~gG~~vv~~~-------~~~~~~l~~~~~~~g~~~~~~~a~~~l~~l~~-----l~~r~ 268 (400)
T 3nmy_A 204 A---DLVVHSATKYLNGHSDMVGGIAVVGDN-------AELAEQMAFLQNSIGGVQGPFDSFLALRGLKT-----LPLRM 268 (400)
T ss_dssp C---SEEEEETTTTTTCSSSCCCEEEEECSC-------HHHHHHHHHHHHHHCCBCCHHHHHHHHHHHTT-----HHHHH
T ss_pred C---cEEEecCccccCCCCCcceeEEEEeCC-------HHHHHHHHHHHHhcCCCCCHHHHHHHHHhHhH-----HHHHH
Confidence 3 38899999999888888766 44432 567777766553 3345667777776666664 45566
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCCCC----------------CceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEec
Q 014603 320 DILRETADICCDRLKEIPCITCPKKPE----------------GSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLP 383 (422)
Q Consensus 320 ~~~~~~~~~l~~~L~~~~~~~~~~~~~----------------~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~ 383 (422)
++..++.+.+.+.|++.|.+..+..|. .|.++++.++... .....++..+ +-.++.+..
T Consensus 269 ~~~~~~a~~l~~~L~~~p~v~~V~~p~l~~~~~~~~~~~~~~g~G~~~~~~l~~~~----~~~~~~~~~l-~~~~~~~s~ 343 (400)
T 3nmy_A 269 RAHCENALALAQWLETHPAIEKVIYPGLASHPQHVLAKRQMSGFGGIVSIVLKGGF----DAAKRFCEKT-ELFTLAESL 343 (400)
T ss_dssp HHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTHH----HHHHHHHHHC-SSSEECSCC
T ss_pred HHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEeCCcH----HHHHHHHHcC-CcceEecCC
Confidence 777888889999999887654332332 3667888885310 0122233322 333333333
Q ss_pred CCCCC-----------------------CCCeEEEEeccChHHHHHHHHHHHHHHH
Q 014603 384 GITVG-----------------------LKDWLRITFAVEPSALEDGLGRMKAFYD 416 (422)
Q Consensus 384 g~~~~-----------------------~~~~iRis~~~~~~~l~~~~~~l~~~~~ 416 (422)
|..+. .++.+|+|++. |+.+.+++.|+++++
T Consensus 344 G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGl--e~~~dli~dl~~al~ 397 (400)
T 3nmy_A 344 GGVESLVNHPAVMTHASIPVARREQLGISDALVRLSVGI--EDLGDLRGDLERALV 397 (400)
T ss_dssp CSSSCEEECTTTTTTTTSCHHHHHHHTCCTTEEEEECCS--SCHHHHHHHHHHHHC
T ss_pred CCCcceeeCccccccccCCHHHHHhcCCCcCeEEEEeCc--CCHHHHHHHHHHHHh
Confidence 43221 14789999996 345556677777775
No 213
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.94 E-value=5.6e-26 Score=218.49 Aligned_cols=291 Identities=11% Similarity=0.062 Sum_probs=194.9
Q ss_pred CCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEee
Q 014603 83 YSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFD 162 (422)
Q Consensus 83 y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~ 162 (422)
+.+.....++++.+++ ++ .+ +.+++++|+++++..++.+++++||+|++++++|+++...+...|.+++.++
T Consensus 53 ~~~~~~~~~~~~~la~-~g------~~-~~v~~~~G~t~a~~~~~~a~~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~ 124 (446)
T 2x3l_A 53 HHPEEVILKSMKQVEK-HS------DY-DGYFLVNGTTSGILSVIQSFSQKKGDILMARNVHKSVLHALDISQQEGHFIE 124 (446)
T ss_dssp TSCSSHHHHHHHHHCS-CT------TE-EEEEESSHHHHHHHHHHHTTTTSSSCEEECTTCCHHHHHHHHHHTCCEEECE
T ss_pred cCcchHHHHHHHHHHh-cC------CC-ceEEEeCCHHHHHHHHHHHhcCCCCEEEEecCccHHHHHHHHHcCCeEEEEe
Confidence 3444556788888888 73 33 6799999999999999999999999999999999999998888999998888
Q ss_pred ccCCCC----cccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccc-cccCCCCCCC
Q 014603 163 LLPAKG----WEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDH-LAFGNTPFVP 237 (422)
Q Consensus 163 ~~~~~~----~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~-~~~~~~~~~~ 237 (422)
...+++ +.+|++.| +.++++++++++ .|++|.+++ +++|+++|+++|+++|+|++|+. +.|.+. ..+
T Consensus 125 ~~~~~~~~~~~~~d~~~l---~~~~~~~v~~~~-~n~~G~~~~---l~~I~~l~~~~~~~livDea~~~~~~f~~~-~~~ 196 (446)
T 2x3l_A 125 THQSPLTNHYNKVNLSRL---NNDGHKLVVLTY-PNYYGETFN---VEEVIKSLHQLNIPVLIDEAHGAHFGLQGF-PDS 196 (446)
T ss_dssp EEECTTTSSEEEEEC----------CCEEEEES-SCTTSCCCC---HHHHHHHHHHTTCCEEEECTTCTTTTSTTS-CCC
T ss_pred CeeccccCcCCCCCHHHH---cCCCceEEEEEC-CCCCeEecC---HHHHHHHHHhcCCeEEEcchhhhhhccCCC-CCC
Confidence 732222 46788877 456788999999 555999976 77889999999999999999986 334443 233
Q ss_pred ccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhh--hccCcchHHHHHHHHHHhhchHHHH
Q 014603 238 MGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN--ISSDPATFIQGAVPQILEKTEEEFF 315 (422)
Q Consensus 238 ~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~ 315 (422)
....+.+ +++.|+||++ .++.++||+++++.. . + ...+..... .+++++....+++..+++.......
T Consensus 197 ~~~~g~D---i~~~S~~K~l-~~~~g~g~l~~~~~~--i---~-~~~~~~~~~~~~~~s~~~~~~aal~~a~~~l~~~g~ 266 (446)
T 2x3l_A 197 TLNYQAD---YVVQSFHKTL-PALTMGSVLYIHKNA--P---Y-RENIIEYLSYFQTSSPSYLIMASLESAAQFYKTYDS 266 (446)
T ss_dssp GGGGTCS---EEEECHHHHS-SSCTTCEEEEEETTC--T---T-HHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHHHCCC
T ss_pred hHHcCCC---EEEECCcccc-ccccccEEEEEcCCc--C---C-HHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHhCH
Confidence 3333333 8899999963 333458999987531 1 1 223332221 2335555554444444433211112
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEe-cCCCCCCCCeEE
Q 014603 316 SKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVL-PGITVGLKDWLR 394 (422)
Q Consensus 316 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~-~g~~~~~~~~iR 394 (422)
++..++.+++.+.+++. ++.+. .+.++.++|+.++. .+..++...|.+ +||.+. +| .+++|
T Consensus 267 ~~~~~~~~~l~~~l~~~-----g~~~~-~~~~~~~l~i~~~~------~~~~~l~~~L~~-~GI~v~~~g-----~~~iR 328 (446)
T 2x3l_A 267 TLFFAKRAQLIECLENK-----GFEML-QVDDPLKLLIKYEG------FTGHDIQNWFMN-AHIYLELAD-----DYQAL 328 (446)
T ss_dssp HHHHHHHHHHHHHHHHH-----TCEEE-ECSSTTEEEEECTT------SCHHHHHHHHHH-TTEEESEEC-----SSCEE
T ss_pred HHHHHHHHHHHHHHHHc-----CCEEC-cCCCCeEEEEEeCC------cCHHHHHHHHHH-CCCEEEecC-----CCEEE
Confidence 22455555666666555 44422 33345578887752 156677766655 499997 54 36899
Q ss_pred EEec--cChHHHHHHHHHHHHHHHHh
Q 014603 395 ITFA--VEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 395 is~~--~~~~~l~~~~~~l~~~~~~~ 418 (422)
++++ ++++++ +++++|+++++++
T Consensus 329 i~~~~~~t~e~i-~l~~aL~~~~~~~ 353 (446)
T 2x3l_A 329 AILPLWHHDDTY-LFDSLLRKIEDMI 353 (446)
T ss_dssp EECCCCCTTCCC-CHHHHHHHHHTCC
T ss_pred EEeecCCCHHHH-HHHHHHHHHHHhh
Confidence 9998 588899 9999999988665
No 214
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.94 E-value=3.4e-24 Score=210.18 Aligned_cols=334 Identities=10% Similarity=0.047 Sum_probs=214.1
Q ss_pred CcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhc-------C-CC
Q 014603 63 TASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLA-------R-PG 134 (422)
Q Consensus 63 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~-------~-~g 134 (422)
.++.+...+.....+.....|....+..++++.+.+++.+.+| .+++++++|+|+|+|+..++.++. + +|
T Consensus 120 ~~~~~~~~~l~~~~n~~~~~~~~s~~~~~le~~~~~~la~l~g--~~~~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G 197 (515)
T 2jis_A 120 DPHALAGRIITESLNTSQYTYEIAPVFVLMEEEVLRKLRALVG--WSSGDGIFCPGGSISNMYAVNLARYQRYPDCKQRG 197 (515)
T ss_dssp CHHHHHHHHHHHHHCCCTTCTTTCHHHHHHHHHHHHHHHHHHT--CSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHC
T ss_pred CHHHHHHHHHHHHhccCCCchhhchHHHHHHHHHHHHHHHHhC--CCCCCeEEcCCcHHHHHHHHHHHHHHHhhHHhhcC
Confidence 3445544333333233223455544545555555555555444 346789999999999998887763 2 56
Q ss_pred C------EEEecCCCccchHHHHhhCCC---eEEEeeccCCCCcccCHHHHHHhhcC------CceEEEEeCCCCCcccc
Q 014603 135 A------NILLPRPGFPYYEARATHSHL---EVRHFDLLPAKGWEVDLDAVEALADE------NTVALVIINPGNPCGNV 199 (422)
Q Consensus 135 d------~Vl~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~i~i~~p~nptG~~ 199 (422)
+ .|+++.++|+++...++..|. +++.++.+ .++.+|++.|++.+++ +++++++++|+|+||.+
T Consensus 198 ~~~~~~~~vl~s~~~h~s~~~~~~~~g~g~~~v~~v~~~--~~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i 275 (515)
T 2jis_A 198 LRTLPPLALFTSKECHYSIQKGAAFLGLGTDSVRVVKAD--ERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAF 275 (515)
T ss_dssp GGGSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBC--TTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCB
T ss_pred ccccCCeEEEECCCccHHHHHHHHHcCCCCCcEEEEecC--CCCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCc
Confidence 5 899999999999988888888 78888875 3567999999998865 47888999999999999
Q ss_pred cCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCC-CccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccc
Q 014603 200 YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFV-PMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQD 278 (422)
Q Consensus 200 ~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~-~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~ 278 (422)
. ++++|.++|+++|+++++|++|+.+........ .+..+. ...+++.|++|++++| .++|+++++++.
T Consensus 276 ~---~l~~I~~la~~~g~~l~vD~a~~~~~~~~~~~~~~~~g~~--~aD~v~~s~hK~l~~p-~g~G~l~~~~~~----- 344 (515)
T 2jis_A 276 D---PLEAIADVCQRHGLWLHVDAAWGGSVLLSQTHRHLLDGIQ--RADSVAWNPHKLLAAG-LQCSALLLQDTS----- 344 (515)
T ss_dssp C---CHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGG--GCSEEEECTTSTTCCC-SCCEEEEESCCS-----
T ss_pred c---CHHHHHHHHHHcCCeEEEehhhhhHHHhChhhHhhcCCCc--cCCEEEECcccccCCC-CCeeEEEEeChH-----
Confidence 4 588889999999999999999987665322111 122221 1127888999997644 568999997531
Q ss_pred hhHHHHH----Hhhh-h--------hc-c--------CcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcC
Q 014603 279 SGIVDSI----KSFL-N--------IS-S--------DPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEI 336 (422)
Q Consensus 279 ~~~~~~~----~~~~-~--------~~-~--------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 336 (422)
++.++. ..+. . .. + ....+.++++..++. ..++++..++..++++++.+.|+++
T Consensus 345 -~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~al~~~~~l~~lg---~~g~~~~~~~~~~~a~~l~~~L~~~ 420 (515)
T 2jis_A 345 -NLLKRCHGSQASYLFQQDKFYDVALDTGDKVVQCGRRVDCLKLWLMWKAQG---DQGLERRIDQAFVLARYLVEEMKKR 420 (515)
T ss_dssp -CHHHHHHCC---------CCSCGGGCCGGGCSCSSCCCCHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred -HHHHHHhcCCchhccCCcccccccCCCCCCCCCCCCcccHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 133321 1111 0 00 0 011234444444443 4668888899999999999999999
Q ss_pred CCCCCCCCCCCceEEEEecCcccccC---CCCH-H-------HHHHHHHHhcCeEEecCCC-CCCCCeEEEEec---cCh
Q 014603 337 PCITCPKKPEGSMFVMVKLNYSLLEG---INSD-M-------EFALKLAKEESVIVLPGIT-VGLKDWLRITFA---VEP 401 (422)
Q Consensus 337 ~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~-~-------~~~~~l~~~~gi~v~~g~~-~~~~~~iRis~~---~~~ 401 (422)
|++.++..|..+.+.+...+.. ..+ ..+- . .+...+ .+.|+....... .+..+++|++++ +++
T Consensus 421 ~g~~~~~~~~~~~v~f~~~p~~-~~~~~~~~~~~~~l~~~~~~l~~~l-~~~G~~~~~~~~~~~~~~~lRis~~~~~~t~ 498 (515)
T 2jis_A 421 EGFELVMEPEFVNVCFWFVPPS-LRGKQESPDYHERLSKVAPVLKERM-VKEGSMMIGYQPHGTRGNFFRVVVANSALTC 498 (515)
T ss_dssp TTEEESSCCSSSEEEEEECCGG-GTTCTTSTTHHHHHHTHHHHHHHHH-HHHTSCEEEEEEETTEEEEEEEECCCTTCCH
T ss_pred CCEEEeCCCCeeEEEEEEeCcc-ccccccchhHHHHHHHHHHHHHHHH-HhcCCEEEEEEEECCceEEEEEEeCCCCCCH
Confidence 8887554454454444333321 000 0010 1 133444 344754422111 122468999994 789
Q ss_pred HHHHHHHHHHHHHHHH
Q 014603 402 SALEDGLGRMKAFYDR 417 (422)
Q Consensus 402 ~~l~~~~~~l~~~~~~ 417 (422)
+++++++++|++++++
T Consensus 499 edid~~~~~l~~~~~~ 514 (515)
T 2jis_A 499 ADMDFLLNELERLGQD 514 (515)
T ss_dssp HHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999987754
No 215
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.94 E-value=3e-24 Score=205.15 Aligned_cols=287 Identities=20% Similarity=0.158 Sum_probs=193.8
Q ss_pred CCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHH----hhCCCeEEEe-e
Q 014603 88 GILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARA----THSHLEVRHF-D 162 (422)
Q Consensus 88 g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~----~~~g~~~~~~-~ 162 (422)
...+++++++++++. . ..+++++|++|++.++.+++++||+|+++.++|+++...+ +..|.+++.+ +
T Consensus 59 ~~~~l~~~la~~~g~------~--~~v~~~sGt~A~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 130 (421)
T 2ctz_A 59 TVDVLEKRLAALEGG------K--AALATASGHAAQFLALTTLAQAGDNIVSTPNLYGGTFNQFKVTLKRLGIEVRFTSR 130 (421)
T ss_dssp HHHHHHHHHHHHHTC------S--EEEEESSHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHTHHHHTTCEEEECCT
T ss_pred HHHHHHHHHHHHhCC------C--ceEEecCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECC
Confidence 357899999999832 2 3456666799999999998999999999999998876654 6789888877 5
Q ss_pred ccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccc-cccccCCCCCCCcccc
Q 014603 163 LLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVY-DHLAFGNTPFVPMGVF 241 (422)
Q Consensus 163 ~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~-~~~~~~~~~~~~~~~~ 241 (422)
.+ |++.+++.++++++++++++|+||+|.+++ +++|.++|+++|+++|+|++| +. .+.+. ++ ..
T Consensus 131 ~~-------d~~~l~~~i~~~~~~v~~~~~~n~~G~~~~---l~~i~~~a~~~g~~livD~~~~~~-g~~~~---~~-~~ 195 (421)
T 2ctz_A 131 EE-------RPEEFLALTDEKTRAWWVESIGNPALNIPD---LEALAQAAREKGVALIVDNTFGMG-GYLLR---PL-AW 195 (421)
T ss_dssp TC-------CHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECGGGGG-GTSCC---GG-GG
T ss_pred CC-------CHHHHHHhhccCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCcccc-cccCC---cc-cc
Confidence 42 789999999889999999999999999976 888999999999999999999 53 23221 12 22
Q ss_pred CCCCCeEEEecCccccCCCCceeEEEEeeCCC-Cc-cc-chhHH---------------------HHHHh--hhhhccCc
Q 014603 242 GSIVPVLTLGSISKRWIVPGWRLGWLVTSDPN-GI-LQ-DSGIV---------------------DSIKS--FLNISSDP 295 (422)
Q Consensus 242 ~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~-~~-~~-~~~~~---------------------~~~~~--~~~~~~~~ 295 (422)
+. .+++.|++|.++++|.|+|++++.+.. .. .. .+.+. ...+. ........
T Consensus 196 ~~---Di~~~s~~K~l~~~g~~~G~~~~~~~~~~~~~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~r~~~~~~~g~~~ 272 (421)
T 2ctz_A 196 GA---ALVTHSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQPGYHGLRLTEAFGELAFIVKARVDGLRDQGQAL 272 (421)
T ss_dssp TC---SEEEEETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCBGGGTTBCHHHHHGGGHHHHHHHHTHHHHHCCCC
T ss_pred CC---eEEEECCcccccCCCCcEEEEEEeccchhhcccchhhhccccchhhhhhhhhhcchhHHHHHHHHHHHHhcCCCC
Confidence 33 388999999999999999998886321 11 00 00111 00000 01122244
Q ss_pred chHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC-----------------CCceEEEEecCcc
Q 014603 296 ATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKP-----------------EGSMFVMVKLNYS 358 (422)
Q Consensus 296 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-----------------~~g~~~~~~~~~~ 358 (422)
+++..+++...++. +..+.++..++.+++.+.|+++|++..+..| ..|..+.+.++.
T Consensus 273 ~~~~a~~~~~~l~~-----l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~~~~~~~~~~~~~~~~~~~g~ivsf~l~~- 346 (421)
T 2ctz_A 273 GPFEAWVVLLGMET-----LSLRAERHVENTLHLAHWLLEQPQVAWVNYPGLPHHPHHDRAQKYFKGKPGAVLTFGLKG- 346 (421)
T ss_dssp CHHHHHHHHHHHTT-----HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTCTTHHHHHHHHTTCCCSEEEEEETT-
T ss_pred CHHHHHHHHcCcch-----HHHHHHHHHHhHHHHHHHHHhCCCeeEEECCCCCCCCCHHHHHHhccCCCceEEEEEeCC-
Confidence 55555555555554 4455666668889999999998887633222 224456666642
Q ss_pred cccCCCCHHHHHHHHHHh---cCeEEecCCCC----------------------CC-CCeEEEEeccChHHHHHHHHHHH
Q 014603 359 LLEGINSDMEFALKLAKE---ESVIVLPGITV----------------------GL-KDWLRITFAVEPSALEDGLGRMK 412 (422)
Q Consensus 359 ~~~~~~~~~~~~~~l~~~---~gi~v~~g~~~----------------------~~-~~~iRis~~~~~~~l~~~~~~l~ 412 (422)
..+....++.+ .++.+..|..+ +. ++.||+|++. ++++.+++.|+
T Consensus 347 -------~~~~~~~~~~~l~~~~~~~~~G~~~sl~~~~~~~~h~~~~~~~~~~~g~~~~~vRlS~g~--e~~~~li~~l~ 417 (421)
T 2ctz_A 347 -------GYEAAKRFISRLKLISHLANVGDTRTLAIHPASTTHSQLSPEEQAQAGVSPEMVRLSVGL--EHVEDLKAELK 417 (421)
T ss_dssp -------HHHHHHHHHHTCSSSEECSCCCCSSCEEECGGGTTTTTSCHHHHHHHTCCTTEEEEECCS--SCHHHHHHHHH
T ss_pred -------CHHHHHHHHHhCCcceecccCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEeCC--CCHHHHHHHHH
Confidence 11222333333 34444444211 11 4789999885 57888888888
Q ss_pred HHH
Q 014603 413 AFY 415 (422)
Q Consensus 413 ~~~ 415 (422)
+++
T Consensus 418 ~al 420 (421)
T 2ctz_A 418 EAL 420 (421)
T ss_dssp HHT
T ss_pred HHh
Confidence 765
No 216
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.94 E-value=1.1e-24 Score=211.72 Aligned_cols=332 Identities=12% Similarity=0.056 Sum_probs=229.2
Q ss_pred cHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCC--------CCEEEecCHHHHHHHHHHHhcC---
Q 014603 64 ASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSP--------DDVYLTLGCTQAIEVILTVLAR--- 132 (422)
Q Consensus 64 ~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~--------~~i~~~~g~~~a~~~~~~~l~~--- 132 (422)
+..+.+.+...++. ....|...++..++++.+++++.+.+|.+... ...++|+|||+++..++.+...
T Consensus 92 ~~~~~~~~~~~~n~-~~~~~~~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~~ 170 (481)
T 4e1o_A 92 PSLLGDMLADAINC-LGFTWASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKI 170 (481)
T ss_dssp HHHHHHHHHHHHCC-CCSSTTTCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCc-ccCCcCCCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHHH
Confidence 44555666666654 34577777788999999999999877754322 3678999999999888776532
Q ss_pred ----------------CCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCC------ceEEEEe
Q 014603 133 ----------------PGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADEN------TVALVII 190 (422)
Q Consensus 133 ----------------~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~i~i~ 190 (422)
+++.|+++.++|.++...+...|.+++.++.+ .++.+|++.|++.++++ +.+++++
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~g~~~~~v~~~--~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~ 248 (481)
T 4e1o_A 171 LEMKTSEPDADESSLNARLVAYASDQAHSSVEKAGLISLVKMKFLPVD--DNFSLRGEALQKAIEEDKQRGLVPVFVCAT 248 (481)
T ss_dssp HHHHHHCTTSCHHHHHTTEEEEEETTSCHHHHHHHHHHTCEEEEECCC--TTSCCCHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHhhhcCcccccccccCCeEEEEcCcchHHHHHHHHhCCCceEEEEcC--CCCcCCHHHHHHHHHHHHhCCCCcEEEEEe
Confidence 46799999999999999999899999999874 45679999999988653 5667888
Q ss_pred CCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCC-CCccccCCCCCeEEEecCccccCCCCceeEEEEe
Q 014603 191 NPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPF-VPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVT 269 (422)
Q Consensus 191 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~-~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~ 269 (422)
.++|++|.+ +++++|+++|++||+++++|++|+...+..... ..+..+.. -..+..+++|+++.| ..+|++++
T Consensus 249 ~~~t~~G~i---d~l~~I~~la~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi~~--aDsi~~~~hK~l~~p-~g~g~l~~ 322 (481)
T 4e1o_A 249 LGTTGVCAF---DCLSELGPICAREGLWLHIDAAYAGTAFLCPEFRGFLKGIEY--ADSFTFNPSKWMMVH-FDCTGFWV 322 (481)
T ss_dssp BSCTTTCCB---CCHHHHHHHHHHHTCEEEEECTTGGGGGGSGGGGGGGTTGGG--CSEEEECHHHHSSCC-SSCEEEEE
T ss_pred cCCCCCcCc---CCHHHHHHHHHHcCCeEEeehhhHHHHHhChhhHHHhcCccc--CCEEEEChHHhcCCC-CceEEEEE
Confidence 999999998 679999999999999999999998753321111 11111111 125667999997655 44788887
Q ss_pred eCCCCcccchhHHHH-HHh---hh------------hhc---c-CcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHH
Q 014603 270 SDPNGILQDSGIVDS-IKS---FL------------NIS---S-DPATFIQGAVPQILEKTEEEFFSKITDILRETADIC 329 (422)
Q Consensus 270 ~~~~~~~~~~~~~~~-~~~---~~------------~~~---~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l 329 (422)
+++ ..... +.. +. ... + ....+.++++..++ ..++++++.++..++++++
T Consensus 323 ~~~-------~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~r~~~~l~~~~al~~~---g~~g~~~~~~~~~~~a~~l 392 (481)
T 4e1o_A 323 KDK-------YKLQQTFSVNPIYLRHANSGVATDFMHWQIPLSRRFRSVKLWFVIRSF---GVKNLQAHVRHGTEMAKYF 392 (481)
T ss_dssp SBH-------HHHHTTTCCCCGGGCCTTTTTSCCGGGGSSSSCCCCTHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHH
T ss_pred eCH-------HHHHHHhcCCchhccCcccCCCCCcccccccCCCCccHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHH
Confidence 642 22211 100 00 000 0 01223344444443 3567888999999999999
Q ss_pred HHHhhcCCCCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec---cChHHHHH
Q 014603 330 CDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA---VEPSALED 406 (422)
Q Consensus 330 ~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~---~~~~~l~~ 406 (422)
.+.|+++|++.+. .+....+++++++... ....++..++.++..+.+.|+.. ....++|++++ +++++|++
T Consensus 393 ~~~L~~~~g~~~~-~~~~~~~v~f~~~~~~----~~~~~l~~~L~~~g~~~~~~~~~-~g~~~lR~~~~~~~tt~~di~~ 466 (481)
T 4e1o_A 393 ESLVRNDPSFEIP-AKRHLGLVVFRLKGPN----SLTENVLKEIAKAGRLFLIPATI-QDKLIIRFTVTSQFTTRDDILR 466 (481)
T ss_dssp HHHHHTCTTEECC-SCCCSSEEEEEESSCH----HHHHHHHHHHHHHCSSBCEEEEE-TTEEEEEEECCCTTCCHHHHHH
T ss_pred HHHHhcCCCeEEe-cCCceeEEEEEeCCch----HHHHHHHHHHHhCCeEEEEeeEE-CCEEEEEEEeCCCCCCHHHHHH
Confidence 9999999998854 4444556677774310 02456667766553355555432 22468999976 47899999
Q ss_pred HHHHHHHHHHHhcc
Q 014603 407 GLGRMKAFYDRHAK 420 (422)
Q Consensus 407 ~~~~l~~~~~~~~~ 420 (422)
++++|+++++++.+
T Consensus 467 ~~~~i~~~~~~l~~ 480 (481)
T 4e1o_A 467 DWNLIRDAATLILS 480 (481)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999887654
No 217
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.94 E-value=8e-24 Score=200.60 Aligned_cols=307 Identities=15% Similarity=0.151 Sum_probs=210.3
Q ss_pred CCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHh-------cCCC
Q 014603 62 RTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVL-------ARPG 134 (422)
Q Consensus 62 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l-------~~~g 134 (422)
..++++.+++.+.+... .|.+..+..++|+.++++++ . ++++++++|++|++.++.++ .++|
T Consensus 12 ~~~~~~~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~~------~--~~~i~~~sGt~a~~~al~~~~~~~~~~~~~g 80 (390)
T 3b8x_A 12 TWDDLEYKAIQSVLDSK---MFTMGEYVKQYETQFAKTFG------S--KYAVMVSSGSTANLLMIAALFFTKKPRLKKG 80 (390)
T ss_dssp CCCHHHHHHHHHHHHHT---CCSSCHHHHHHHHHHHHHHT------C--SEEEEESCHHHHHHHHHHHTTSSSSCSCCTT
T ss_pred CCCHHHHHHHHHHHHcC---CCCCChHHHHHHHHHHHHHC------C--CcEEEECCHHHHHHHHHHHHHhhhhcCCCCc
Confidence 35688999999888652 35556678999999999993 2 36788888899999999998 7889
Q ss_pred CEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHH
Q 014603 135 ANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKK 214 (422)
Q Consensus 135 d~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~ 214 (422)
|+|+++.++|+++...+...|.+++.++++++ ++.+|++.|++.++++++++++++ ++|.. .++++|.++|++
T Consensus 81 ~~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~v~~~~---~~g~~---~~~~~i~~l~~~ 153 (390)
T 3b8x_A 81 DEIIVPAVSWSTTYYPLQQYGLRVKFVDIDIN-TLNIDIESLKEAVTDSTKAILTVN---LLGNP---NNFDEINKIIGG 153 (390)
T ss_dssp CEEEEESSSCHHHHHHHHHTTCEEEEECBCTT-TCSBCHHHHHHHCCTTEEEEEEEC---GGGCC---CCHHHHHHHHTT
T ss_pred CEEEECCCCcHHHHHHHHHcCCEEEEEecCcc-ccCcCHHHHHHHhCcCCeEEEEEC---CccCh---hhHHHHHHHHHH
Confidence 99999999999999999999999999988653 467999999999988889888875 45554 578999999999
Q ss_pred cCcEEEEcccccccc-cCCCCCCCccccCCCCCeEEEec--CccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhhh
Q 014603 215 LGIMVIADEVYDHLA-FGNTPFVPMGVFGSIVPVLTLGS--ISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI 291 (422)
Q Consensus 215 ~~~~li~D~~~~~~~-~~~~~~~~~~~~~~~~~~i~i~s--~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (422)
+|+++|+|++|+... +.+ ..++.... +...| .+|.++ +| +.|++++++ +++.++++.....
T Consensus 154 ~~~~li~D~a~~~g~~~~~------~~~g~~~~-~~~~s~~~~k~~~-~g-~gG~~~~~~-------~~l~~~~~~~~~~ 217 (390)
T 3b8x_A 154 RDIILLEDNCESMGATFNN------KCAGTFGL-MGTFSSFYSNHIA-TM-EGGCIVTDD-------EEIYHILLCIRAH 217 (390)
T ss_dssp SCCEEEEECTTCTTCEETT------EETTSSSS-EEEEECCTTSSSC-SS-SCEEEEESC-------HHHHHHHHHHTBT
T ss_pred cCCEEEEECcCcccCEECC------cccccccc-eEEEEccCCCCCc-cC-CceEEEeCC-------HHHHHHHHHHHhc
Confidence 999999999998422 211 12222111 22222 245432 23 348888763 3455555432210
Q ss_pred --------------------------------ccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 014603 292 --------------------------------SSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCI 339 (422)
Q Consensus 292 --------------------------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 339 (422)
....+.+..+++...+ +.+++..++.+++++++.+.|+++|++
T Consensus 218 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l-----~~l~~~~~~~~~~~~~l~~~L~~~~~~ 292 (390)
T 3b8x_A 218 GWTRNLPKKNKVTGVKSDDQFEESFKFVLPGYNVRPLEMSGAIGIEQL-----KKLPRFISVRRKNAEYFLDKFKDHPYL 292 (390)
T ss_dssp TBSTTSCSEETTTEECCSCTTTSSSCBCSCCCBCCCCHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHTTCSSE
T ss_pred CCCccccccccccccccccccccccceeccccccCcCHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 0013334444444444 346778888889999999999998887
Q ss_pred CCCCCC-CCc-eEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecC---CCCCC----------------------CCe
Q 014603 340 TCPKKP-EGS-MFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPG---ITVGL----------------------KDW 392 (422)
Q Consensus 340 ~~~~~~-~~g-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g---~~~~~----------------------~~~ 392 (422)
.+...+ ... ..+++.++... + .+..++...| .++||.+.+. ..+.. .+.
T Consensus 293 ~~~~~~~~~~~~~~~i~~~~~~--~-~~~~~l~~~L-~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (390)
T 3b8x_A 293 DVQQETGESSWFGFSFIIKKDS--G-VIRKQLVENL-NSAGIECRPIVTGNFLKNTDVLKYFDYTVHNNVDNAEYLDKNG 368 (390)
T ss_dssp EECCCCSBCCCCEEEEEECTTS--C-CCHHHHHHHH-HHTTBCCBCSTTSSGGGCHHHHTTCEEEESSCCHHHHHHHHHE
T ss_pred ccCCCCCCcccEEEEEEecCcC--c-ccHHHHHHHH-HHCCCCeeeecCCchhhcchhhhcCCCCCcCCChHHHHHhcCE
Confidence 633221 122 23445554210 1 1456666665 5679999873 22111 135
Q ss_pred EEEEec--cChHHHHHHHHHH
Q 014603 393 LRITFA--VEPSALEDGLGRM 411 (422)
Q Consensus 393 iRis~~--~~~~~l~~~~~~l 411 (422)
+|++++ ++++|++++++.|
T Consensus 369 l~l~~~~~~t~~di~~i~~~l 389 (390)
T 3b8x_A 369 LFVGNHQIELFDEIDYLREVL 389 (390)
T ss_dssp EEEECCSSCCHHHHHHHHHHT
T ss_pred EEeeCCCCCCHHHHHHHHHhh
Confidence 999997 7899999998875
No 218
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.93 E-value=1.7e-24 Score=209.74 Aligned_cols=340 Identities=11% Similarity=0.012 Sum_probs=227.5
Q ss_pred cHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCC-------CCEEEecCHHHHHHHHHHHhcC----
Q 014603 64 ASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSP-------DDVYLTLGCTQAIEVILTVLAR---- 132 (422)
Q Consensus 64 ~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~-------~~i~~~~g~~~a~~~~~~~l~~---- 132 (422)
+..+.+.+...++. ....|...++..++++.+++++.+.+|.+... ...++|+|||+++..++.+...
T Consensus 87 ~~~~~~~l~~~~n~-~~~~~~~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~ 165 (475)
T 3k40_A 87 PAIVADMLSGAIAC-IGFTWIASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLK 165 (475)
T ss_dssp HHHHHHHHHHHHCC-CSSSCCCCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCc-cccCccCCcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHH
Confidence 34455556666544 33467777778899999999999887754321 3688999999998887766521
Q ss_pred ---------------CCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCC------ceEEEEeC
Q 014603 133 ---------------PGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADEN------TVALVIIN 191 (422)
Q Consensus 133 ---------------~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~i~i~~ 191 (422)
+++.|+++..+|.++...+...|.+++.++.+ .++ +|++.|++.++++ +.+++++.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~vi~s~~~H~s~~~~~~~~g~~~~~v~~d--~~~-~d~~~L~~~i~~~~~~~~~~~~v~~~~ 242 (475)
T 3k40_A 166 EVKELHPEWDEHTILGKLVGYCSDQAHSSVERAGLLGGVKLRSVQSE--NHR-MRGAALEKAIEQDVAEGLIPFYAVVTL 242 (475)
T ss_dssp HHHHHCTTSCHHHHHHHEEEEEETTSCHHHHHHHHHHTCEEEEECCB--TTB-CCHHHHHHHHHHHHHTTCEEEEEEEEB
T ss_pred HhhccCcccccccccCCeEEEECCCchHHHHHHHHHcCCceEEEECC--CCC-cCHHHHHHHHHHHHHCCCccEEEEEEe
Confidence 24689999999999999999999999999875 346 9999999988653 56778889
Q ss_pred CCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCC-CCCCCccccCCCCCeEEEecCccccCCCCceeEEEEee
Q 014603 192 PGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGN-TPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTS 270 (422)
Q Consensus 192 p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~-~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~ 270 (422)
++|++|.+ +++++|+++|++||+++++|++|+...+.. .....+..+.. -..+..+++|+++.| ..+|+++++
T Consensus 243 ~~t~~G~~---~~l~~I~~la~~~~~~lhvD~A~~~~~~~~~~~~~~~~gi~~--~Ds~~~~~hK~l~~p-~g~g~l~~~ 316 (475)
T 3k40_A 243 GTTNSCAF---DYLDECGPVGNKHNLWIHVDAAYAGSAFICPEYRHLMKGIES--ADSFNFNPHKWMLVN-FDCSAMWLK 316 (475)
T ss_dssp SCTTTCCB---CCHHHHHHHHHHTTCEEEEECTTGGGGGGSGGGGGGGTTGGG--CSEEEECHHHHSSCC-SSCEEEEES
T ss_pred cCCCCcCc---CCHHHHHHHHHHhCCeEEEeHHhHHHHHhCHhhHHHhcCccc--CCEEEECchhccCCC-CceEEEEEe
Confidence 99999998 678999999999999999999998643211 11111111111 126778999986544 457888887
Q ss_pred CCCCcccchhH-HHHHHhh--------hhhcc-Cc---chHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 014603 271 DPNGILQDSGI-VDSIKSF--------LNISS-DP---ATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIP 337 (422)
Q Consensus 271 ~~~~~~~~~~~-~~~~~~~--------~~~~~-~~---~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 337 (422)
++......-.. ...+... ..... .. ..+.++++..++ ....++++.++..++++++.+.|+++|
T Consensus 317 ~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~~l~l~~al~~~---g~~g~~~~~~~~~~~a~~l~~~L~~~~ 393 (475)
T 3k40_A 317 DPSWVVNAFNVDPLYLKHDMQGSAPDYRHWQIPLGRRFRALKLWFVLRLY---GVENLQAHIRRHCNFAKQFGDLCVADS 393 (475)
T ss_dssp SGGGC---------------------------CCCGGGTHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHST
T ss_pred CHHHHHHHhcCCccccCCCcCCCCCCcccccccCCCcccHHHHHHHHHHH---hHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 54321100000 0001000 00000 00 122333333333 356788899999999999999999999
Q ss_pred CCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec---cChHHHHHHHHHHHHH
Q 014603 338 CITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA---VEPSALEDGLGRMKAF 414 (422)
Q Consensus 338 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~---~~~~~l~~~~~~l~~~ 414 (422)
++.+. .+.....++++++... ....++..++.++.++.+.|+...+ ..++|++++ +++++|++++++|+++
T Consensus 394 g~~l~-~~~~~~iv~f~~~~~~----~~~~~l~~~L~~~g~~~~~~~~~~g-~~~lR~~~~~~~tt~~di~~~~~~i~~~ 467 (475)
T 3k40_A 394 RFELA-AEINMGLVCFRLKGSN----ERNEALLKRINGRGHIHLVPAKIKD-VYFLRMAICSRFTQSEDMEYSWKEVSAA 467 (475)
T ss_dssp TEEES-SCCBTTEEEEEESSCH----HHHHHHHHHHHHHTSCBCEEEEETT-EEEEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred CEEEe-cCCceEEEEEEeCCch----HHHHHHHHHHHhCCcEEEEeeEECC-EEEEEEEeCCCCCCHHHHHHHHHHHHHH
Confidence 98855 3444455666664310 0245677777666555565543332 568999986 5789999999999999
Q ss_pred HHHhcccC
Q 014603 415 YDRHAKKQ 422 (422)
Q Consensus 415 ~~~~~~~~ 422 (422)
.+++.+.|
T Consensus 468 ~~~~~~~~ 475 (475)
T 3k40_A 468 ADEMEQEQ 475 (475)
T ss_dssp HHHHHTCC
T ss_pred HHHHhccC
Confidence 98876543
No 219
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.93 E-value=2.7e-24 Score=206.88 Aligned_cols=284 Identities=18% Similarity=0.169 Sum_probs=186.8
Q ss_pred CHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHH-hcCCCCEEEecCCCccchHHHH----hhCCCeEEEeec
Q 014603 89 ILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTV-LARPGANILLPRPGFPYYEARA----THSHLEVRHFDL 163 (422)
Q Consensus 89 ~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~-l~~~gd~Vl~~~~~~~~~~~~~----~~~g~~~~~~~~ 163 (422)
..++++.+++++ +.+++++++++|++.+++++..+ ..++||+|+++.++|+.+...+ +..|++++.++.
T Consensus 110 ~~~~~~~la~~~------g~~~~~i~~~~g~taa~ea~~~a~~~~~gd~Viv~~~~h~s~~~~~~~~a~~~G~~v~~v~~ 183 (438)
T 1wyu_A 110 TFEYQTMIAELA------GLEIANASMYDGATALAEGVLLALRETGRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLTLPL 183 (438)
T ss_dssp HHHHHHHHHHHH------TSSEECSCBSSHHHHHHHHHHHHHHHHTCCEEEEETTSCHHHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHHh------CCCccceEEeCcHHHHHHHHHHHHhcCCCCEEEEcCccCHhHHHHHHHHHHHCCCEEEEEcC
Confidence 446677777776 34667889999999554444433 2468999999999998876444 458999988886
Q ss_pred cCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEccc-ccccccCCCCCCCccccC
Q 014603 164 LPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEV-YDHLAFGNTPFVPMGVFG 242 (422)
Q Consensus 164 ~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~-~~~~~~~~~~~~~~~~~~ 242 (422)
+++.+|++. ++++++++++++| ||||.+. ++++|.++|+++|+++|+|.. ++...+ . .+ ..++
T Consensus 184 ---~~~~~d~~~----i~~~t~~v~i~~p-n~tG~~~---~l~~i~~la~~~g~~vivd~d~~a~g~~---~-~~-~~~g 247 (438)
T 1wyu_A 184 ---EGGRTPLPE----VGEEVGAVVVQNP-NFLGALE---DLGPFAEAAHGAGALFVAVADPLSLGVL---K-PP-GAYG 247 (438)
T ss_dssp ---BTTBCCCCC----CCTTEEEEEEESS-CTTSBCC---CHHHHHHHHHHTTCEEEEECCTTGGGTB---C-CH-HHHT
T ss_pred ---cCCccCHHH----hCCCeEEEEEECC-CCCeEEe---cHHHHHHHHHHcCCEEEEEechhhccCc---C-CC-ccCC
Confidence 234567665 5678999999999 9999996 688889999999999996632 221111 1 11 2333
Q ss_pred CCCCeEEEecCccccC----CCCceeEEEEeeCCCCcccchhHHHHHHhh-------------------------hhhcc
Q 014603 243 SIVPVLTLGSISKRWI----VPGWRLGWLVTSDPNGILQDSGIVDSIKSF-------------------------LNISS 293 (422)
Q Consensus 243 ~~~~~i~i~s~sK~~~----~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~ 293 (422)
.+ ++++| +|.|+ +.|+++|++++++ ++.+.+... .....
T Consensus 248 ~D---~~~~s-~kk~~~~~~~~Gp~~G~l~~~~--------~~~~~l~~~~~g~~~~~~~~~~~~~~l~~~~~~~r~~~~ 315 (438)
T 1wyu_A 248 AD---IAVGD-GQSLGLPMGFGGPHFGFLATKK--------AFVRQLPGRLVSETVDVEGRRGFILTLQAREQYIRRAKA 315 (438)
T ss_dssp CS---EEEEE-CTTTTCCCGGGCSCCEEEEECG--------GGGGGCCSCCEEEEEBTTSCEEEEECCGGGSHHHHGGGS
T ss_pred CC---EEEEC-CcccCCCccCCCCCeeEEEEcH--------HHHHhCCCceeccccccCCCcceeeeccccccccchhcc
Confidence 33 66666 55443 4466899999864 232222100 00011
Q ss_pred Ccc-----hHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceEEEEecCcccccCCCCHHH
Q 014603 294 DPA-----TFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMFVMVKLNYSLLEGINSDME 368 (422)
Q Consensus 294 ~~~-----~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 368 (422)
+++ .+...++..++......++++..+++.++++++.+.|++++++.+. .+. ..+.++.+... .+..+
T Consensus 316 t~~~~~~~~~~a~~aa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~-~~~~~~~~~~~-----~~~~~ 388 (438)
T 1wyu_A 316 KSNITTNAQLTALMGAMYLAALGPEGLREVALKSVEMAHKLHALLLEVPGVRPF-TPK-PFFNEFALALP-----KDPEA 388 (438)
T ss_dssp SCCCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCEEC-SCS-SBCSEEEEECS-----SCHHH
T ss_pred cCCccchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEC-CCC-CeEEEEEEeCC-----CCHHH
Confidence 221 1222222222443334568888999999999999999999888743 343 33322223211 14677
Q ss_pred HHHHHHHhcCeEE--ecCCCCCCCCeEEEEec--cChHHHHHHHHHHHHHH
Q 014603 369 FALKLAKEESVIV--LPGITVGLKDWLRITFA--VEPSALEDGLGRMKAFY 415 (422)
Q Consensus 369 ~~~~l~~~~gi~v--~~g~~~~~~~~iRis~~--~~~~~l~~~~~~l~~~~ 415 (422)
+..+|.+ +||.+ .++..|. ++++|||++ ++++++++++++|++++
T Consensus 389 ~~~~L~~-~gi~v~~~~~~~~~-~~~lRis~~~~~t~edi~~~~~~l~~~l 437 (438)
T 1wyu_A 389 VRRALAE-RGFHGATPVPREYG-ENLALFAATELHEEEDLLALREALKEVL 437 (438)
T ss_dssp HHHHHHH-TTCCCCEECCTTSC-SSEEEEECCTTCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHH-CCceeccccccccC-CCeEEEEecccCCHHHHHHHHHHHHHHh
Confidence 7777754 59998 6776554 789999998 78999999999998764
No 220
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.93 E-value=1.3e-24 Score=203.28 Aligned_cols=331 Identities=13% Similarity=0.031 Sum_probs=220.8
Q ss_pred eeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCC--------CCC--CCCCCHHHHHHHHHHHhhcCCCCCCC-CCEEE-
Q 014603 48 IPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFN--------CYS--STVGILPARRAIADYLNRDLPYKLSP-DDVYL- 115 (422)
Q Consensus 48 i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~--------~y~--~~~g~~~lr~~ia~~l~~~~~~~~~~-~~i~~- 115 (422)
+.|.+..|+ +.|++|+++|.+.+.+...+ ... ....+.+.|+.++++++ ++. ++|+|
T Consensus 28 ~yl~~agpt-----~~p~~V~~a~~~~~~~~~~n~~s~~~~~h~~~~~~~~~~~ar~~la~ll~------~~~~~evif~ 96 (386)
T 3qm2_A 28 VFNFSSGPA-----MLPAEVLKLAQQELCDWHGLGTSVMEISHRGKEFIQVAEEAEQDFRDLLN------IPSNYKVLFC 96 (386)
T ss_dssp CEECCSSSC-----CCCHHHHHHHTCC-----------------------CCHHHHHHHHHHHT------CCTTEEEEEE
T ss_pred CccccCCCC-----CCCHHHHHHHHHHHHhccccCccccccCCCCHHHHHHHHHHHHHHHHHhC------CCCCceEEEE
Confidence 556665555 67899999998766431100 111 13568899999999994 433 46888
Q ss_pred ecCHHHHHHHHHHHhcCCCCEEEecCCCcc--chHHHHhhCCCeEEEeecc-CCCCcccCHHHHHHhhcCCceEEEEeCC
Q 014603 116 TLGCTQAIEVILTVLARPGANILLPRPGFP--YYEARATHSHLEVRHFDLL-PAKGWEVDLDAVEALADENTVALVIINP 192 (422)
Q Consensus 116 ~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~--~~~~~~~~~g~~~~~~~~~-~~~~~~~d~~~l~~~~~~~~~~i~i~~p 192 (422)
|+|+|+++++++..++++||+|++...+++ .+...++..| .+..++.+ +..+..++++.++..++++++++.+++.
T Consensus 97 t~~~T~a~n~ai~~l~~~gd~v~~~~~~~~~~~~~~~a~~~G-~v~~v~~~~~~~G~~~~~~~~~~~l~~~t~lV~~~h~ 175 (386)
T 3qm2_A 97 HGGGRGQFAGVPLNLLGDKTTADYVDAGYWAASAIKEAKKYC-APQIIDAKITVDGKRAVKPMREWQLSDNAAYLHYCPN 175 (386)
T ss_dssp ESCTTHHHHHHHHHHCTTCCEEEEEESSHHHHHHHHHHTTTS-EEEEEECEEEETTEEEECCGGGCCCCTTCSCEEECSE
T ss_pred cCCchHHHHHHHHhccCCCCeEEEEeCCHHHHHHHHHHHHhC-CeEEEecCcccCCCCCCchHHHhhcCCCCcEEEEECC
Confidence 699999999999999999999876554443 3455566778 88888765 1233336778888888889999999988
Q ss_pred CCCcccc-cCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeC
Q 014603 193 GNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD 271 (422)
Q Consensus 193 ~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~ 271 (422)
.|.||+. .| +++|. +|+++++|.+++. |..+.++..++ +.+.|.+|++|.+| +|++++++
T Consensus 176 et~tG~~i~p---i~~i~-----~g~~~~vDa~qs~----g~~pidv~~~~-----~~~~s~hK~lGP~G--~g~l~v~~ 236 (386)
T 3qm2_A 176 ETIDGIAIDE---TPDFG-----PEVVVTADFSSTI----LSAPLDVSRYG-----VIYAGAQKNIGPAG--LTLVIVRE 236 (386)
T ss_dssp ETTTTEECCC---CCCCC-----TTCCEEEECTTTT----TSSCCCGGGCS-----EEEEETTTTTCCTT--EEEEEEEG
T ss_pred cCCcCEecCc---hhhhc-----CCCEEEEEccccc----CCCCCCccccC-----EEEEecccccCCCc--cEEEEECH
Confidence 8999996 54 44443 6999999999987 54455555553 46689999998777 78888864
Q ss_pred CCCccc---chhHHH--HHHhhhhhccCcchHHHHHHHHHHhhchHH-HHHHHHHHHHHHHHHHHHHhhcCCCC-CCCCC
Q 014603 272 PNGILQ---DSGIVD--SIKSFLNISSDPATFIQGAVPQILEKTEEE-FFSKITDILRETADICCDRLKEIPCI-TCPKK 344 (422)
Q Consensus 272 ~~~~~~---~~~~~~--~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~~~-~~~~~ 344 (422)
...... .+.+.+ .........++++....+++.++++...+. .++.+.++.+++++++++.|+++ ++ .....
T Consensus 237 ~~~~~~~~~~p~~~~~~~~~~~~~~~gTp~v~~i~~l~~Al~~~~~~gG~~~i~~~~~~l~~~l~~~l~~~-~~~~~~~~ 315 (386)
T 3qm2_A 237 DLLGKAHESCPSILDYTVLNDNDSMFNTPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAELLYGVIDNS-DFYRNDVA 315 (386)
T ss_dssp GGCSCCCTTSCGGGCHHHHHHC-------CCSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTC-SSEECCBC
T ss_pred HHHhhhcccCCcHHHHHHHhhcCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHC-CCcccCCC
Confidence 321000 011111 111111223577888888888888865555 78999999999999999999988 44 21111
Q ss_pred C--CCceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHHHHHHHHHh
Q 014603 345 P--EGSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 345 ~--~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~l~~~~~~~ 418 (422)
+ .....+.+.++... .+.+++.. ++++||.+.+|..+ .+.+|+|+. ++++|++++++.|+++.++.
T Consensus 316 ~~~rs~~iv~f~~~~~~-----~~~~~~~~-L~~~gI~~~~g~~~--~~~iRiS~~~~~t~edId~l~~~l~~~~~~~ 385 (386)
T 3qm2_A 316 QANRSRMNVPFQLADNT-----LDKVFLEE-SFAAGLHALKGHRV--VGGMRASIYNAMPIEGVKALTDFMIDFERRH 385 (386)
T ss_dssp GGGBCSSEEEEEESSGG-----GHHHHHHH-HHHTTEECCBCCTT--TCSEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHcCceEEEEECCCcc-----ccHHHHHH-HHHCCCEEeCCCCC--cCeEEEEcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 2 22335556665311 13455555 46779999888654 256999998 68999999999999987663
No 221
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.93 E-value=2.7e-24 Score=200.03 Aligned_cols=326 Identities=12% Similarity=0.050 Sum_probs=224.5
Q ss_pred CCCcHHHHHHHHHHhhCCCCCCCC----C------CCCCHHHHHHHHHHHhhcCCCCCCC-CCEEE-ecCHHHHHHHHHH
Q 014603 61 FRTASVAVDAIVHSVRSARFNCYS----S------TVGILPARRAIADYLNRDLPYKLSP-DDVYL-TLGCTQAIEVILT 128 (422)
Q Consensus 61 ~~~~~~v~~a~~~~~~~~~~~~y~----~------~~g~~~lr~~ia~~l~~~~~~~~~~-~~i~~-~~g~~~a~~~~~~ 128 (422)
.+.|++|.++|.+.+.+...+.-+ . ...+.+.|+.++++++ ++. ++|+| ++|+|+++++++.
T Consensus 22 ~~~p~~Vl~a~~~~~~~~~~n~~s~~~~~hr~~~~~~~~~~ar~~la~ll~------~~~~~evif~t~~~T~a~n~a~~ 95 (377)
T 3e77_A 22 SMLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLA------VPDNYKVIFLQGGGCGQFSAVPL 95 (377)
T ss_dssp CCCCHHHHHHHHHTSSSGGGSSSCTTTCCTTSHHHHHHHHHHHHHHHHHHT------CCTTEEEEEESSHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhC------CCCCCeEEEEcCchHHHHHHHHH
Confidence 588999999999987642111100 0 1235677888899883 443 57888 5899999999999
Q ss_pred HhcCC--CCEEEecCCCccc--hHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHH
Q 014603 129 VLARP--GANILLPRPGFPY--YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQH 204 (422)
Q Consensus 129 ~l~~~--gd~Vl~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~ 204 (422)
.+..+ ||+|++...++++ +...++..|..++.++.+ .++..+++.++..++++++++.+++..|.||++.|.
T Consensus 96 ~l~~~~~Gd~v~~~~~g~~~~~~~~~a~~~G~~~~~~~~~--~~~~~~~~~~~~~i~~~t~lV~~~h~et~tG~~~pi-- 171 (377)
T 3e77_A 96 NLIGLKAGRCADYVVTGAWSAKAAEEAKKFGTINIVHPKL--GSYTKIPDPSTWNLNPDASYVYYCANETVHGVEFDF-- 171 (377)
T ss_dssp HHGGGSTTCEEEECCCSHHHHHHHHHHTTTSEEEECSCCC--SSSCSCCCGGGCCCCTTCSCEEEESEETTTTEECSS--
T ss_pred hccCCCCCCeEEEEECCHHHHHHHHHHHHhCCceEEeccC--CCcCCCCChHHhccCCCccEEEEeCccCchheEchh--
Confidence 98765 8999877766644 344566677766666653 234467777777788889999999999999999875
Q ss_pred HHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccc---hhH
Q 014603 205 LQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQD---SGI 281 (422)
Q Consensus 205 l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~---~~~ 281 (422)
+|+++|+++++|.+++. |..+.++..++ +++.|.+|++|.+| +|++++++....... +.+
T Consensus 172 ------i~~~~~~~~~vD~~q~~----g~~~id~~~~~-----~~~~s~~K~~gp~G--~g~l~~~~~~l~~~~~~~p~~ 234 (377)
T 3e77_A 172 ------IPDVKGAVLVCDMSSNF----LSKPVDVSKFG-----VIFAGAQKNVGSAG--VTVVIVRDDLLGFALRECPSV 234 (377)
T ss_dssp ------CCCCTTCCEEEECTTTT----TSSCCCGGGCS-----EEEEEGGGTTSCTT--CEEEEEETTSCSCCCTTSCGG
T ss_pred ------hhccCCCEEEEEccccc----CCCCCchhhcC-----EEEEecccccCCCc--cEEEEEcHHHHhhccCCCCch
Confidence 36688999999999987 44445555543 46789999998788 688887643211100 112
Q ss_pred HH--HHHhhhhhccCcchHHHHHHHHHHhhchHH-HHHHHHHHHHHHHHHHHHHhhcCCCCCCC-CCC--CCceEEEEec
Q 014603 282 VD--SIKSFLNISSDPATFIQGAVPQILEKTEEE-FFSKITDILRETADICCDRLKEIPCITCP-KKP--EGSMFVMVKL 355 (422)
Q Consensus 282 ~~--~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~--~~g~~~~~~~ 355 (422)
.+ .........++|+....+++.++|+...+. .++.+.++.+++.+++++.|+++|++.+. ..+ ..+..+.+.+
T Consensus 235 ~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~ 314 (377)
T 3e77_A 235 LEYKVQAGNSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFRI 314 (377)
T ss_dssp GCHHHHHTTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSEECCSCGGGBCSSEEEEEE
T ss_pred hhHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhcCCceecCCCHHHcCCcEEEEEc
Confidence 11 111111234588888888888888865555 79999999999999999999999887621 111 2233455566
Q ss_pred CcccccCCCC-HHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHHHHHHHHHh
Q 014603 356 NYSLLEGINS-DMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 356 ~~~~~~~~~~-~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~l~~~~~~~ 418 (422)
+.... ..+ +..++..+ .++||.+.+|... .+.+|+|+. +++++++++++.|+++.++.
T Consensus 315 ~~~~~--~~~~~~~~l~~l-~~~Gi~~~~g~~~--~g~iRiS~~~~~t~edId~l~~al~~~~~~~ 375 (377)
T 3e77_A 315 GNAKG--DDALEKRFLDKA-LELNMLSLKGHRS--VGGIRASLYNAVTIEDVQKLAAFMKKFLEMH 375 (377)
T ss_dssp SSTTC--CHHHHHHHHHHH-HHTTEESCBCCTT--TCSEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCC--chhHHHHHHHHH-HHCCcEEeCCCCc--CCEEEEECCCCCCHHHHHHHHHHHHHHHHHc
Confidence 53100 000 12444544 4679999888642 467999998 68999999999999998764
No 222
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.93 E-value=5.3e-24 Score=197.42 Aligned_cols=323 Identities=14% Similarity=0.091 Sum_probs=222.0
Q ss_pred CCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCC----C------CCCCHHHHHHHHHHHhhcCCCCCC-CCCE
Q 014603 45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYS----S------TVGILPARRAIADYLNRDLPYKLS-PDDV 113 (422)
Q Consensus 45 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~----~------~~g~~~lr~~ia~~l~~~~~~~~~-~~~i 113 (422)
..+.+|+-|. -+.|++|.++|.+.+.+...+..+ . ...+.+.|+.++++++ ++ +++|
T Consensus 4 ~~~~~f~pgp------t~~~~~V~~a~~~~~~~~~~~~~s~~~~~hr~~~~~~~~~~~r~~la~ll~------~~~~~~v 71 (361)
T 3m5u_A 4 MRKINFSAGP------STLPLEILEQAQKELCDYQGRGYSIMEISHRTKVFEEVHFGAQEKAKKLYE------LNDDYEV 71 (361)
T ss_dssp CCCEECCSSS------CCCCHHHHHHHHHTSSSGGGSSSCGGGSCSSSHHHHHHHHHHHHHHHHHHT------CCTTEEE
T ss_pred cceEeecCCC------CCCcHHHHHHHHHHHHhcccCCceeeccCCCCHHHHHHHHHHHHHHHHHhC------CCCCceE
Confidence 4567777665 367899999999987532111110 0 1235677888899883 43 4578
Q ss_pred EE-ecCHHHHHHHHHHHhcCCCCEEEecCC-Cc-cchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEe
Q 014603 114 YL-TLGCTQAIEVILTVLARPGANILLPRP-GF-PYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVII 190 (422)
Q Consensus 114 ~~-~~g~~~a~~~~~~~l~~~gd~Vl~~~~-~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~ 190 (422)
+| |+|+|+++++++..+. +||++++... .| +.+...++..|.++..++.+..+.+..+++. + ++++++++.++
T Consensus 72 ~f~t~~~T~a~n~~~~~~~-~~~~~~~i~~~~~~~~~~~~a~~~G~~v~~~~~~~~g~~~~~~~~--~-l~~~t~lv~~~ 147 (361)
T 3m5u_A 72 LFLQGGASLQFAMIPMNLA-LNGVCEYANTGVWTKKAIKEAQILGVNVKTVASSEESNFDHIPRV--E-FSDNADYAYIC 147 (361)
T ss_dssp EEESSHHHHHHHHHHHHHC-CSSCEEEEECSHHHHHHHHHHHHTTCCEEEEEECTTTTSCSCCCC--C-CCTTSSEEEEE
T ss_pred EEEcCcHHHHHHHHHHhcC-CCCeEEEEeCCHHHHHHHHHHHHcCCceEEEecccCcCCCcCChh--h-cCCCCCEEEEe
Confidence 87 9999999999999988 7886532222 22 2345566778999999988654322245555 3 78889999999
Q ss_pred CCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEee
Q 014603 191 NPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTS 270 (422)
Q Consensus 191 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~ 270 (422)
+..|.||++.+. +++ +|+++++|.+++. |..+.++..+ .+++.|.+|++|.+| +|+++.+
T Consensus 148 ~~e~~tG~~~~~--------i~~-~~~~~~vD~~q~~----g~~~id~~~~-----d~~~~s~~K~~gp~G--~g~l~~~ 207 (361)
T 3m5u_A 148 SNNTIYGTQYQN--------YPK-TKTPLIVDASSDF----FSRKVDFSNI-----ALFYGGVQKNAGISG--LSCIFIR 207 (361)
T ss_dssp SEETTTTEECSS--------CCC-CSSCEEEECGGGT----TSSCCCCTTE-----EEEEEETTTTSSCTT--CEEEEEE
T ss_pred CCCCCcceeCCc--------ccc-cCCEEEEEccccc----CCCCCCcccC-----CEEEEechhccCCCc--cEEEEEc
Confidence 999999998651 233 4999999999987 4444444432 277889999998777 7888876
Q ss_pred CCCCcccchhHHHHHHh--------------hhhhccCcchHHHHHHHHHHhhchHH-HHHHHHHHHHHHHHHHHHHhhc
Q 014603 271 DPNGILQDSGIVDSIKS--------------FLNISSDPATFIQGAVPQILEKTEEE-FFSKITDILRETADICCDRLKE 335 (422)
Q Consensus 271 ~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~ 335 (422)
+++.+++.. .....++++....+++.++++...+. .++.+.++.+++++++++.|++
T Consensus 208 --------~~~~~~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l~~~l~~~L~~ 279 (361)
T 3m5u_A 208 --------KDMLERSKNKQIPSMLNYLTHAENQSLFNTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKATMLYECIDL 279 (361)
T ss_dssp --------HHHHHHHHTCCCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred --------HHHHhhhcCCCCCceeehHHHhhcCCCCCCccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHH
Confidence 345444432 11123578888888888888765445 6899999999999999999999
Q ss_pred CCCC-CCCCCCC--CceEEEEecCcccccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHH
Q 014603 336 IPCI-TCPKKPE--GSMFVMVKLNYSLLEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGR 410 (422)
Q Consensus 336 ~~~~-~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~ 410 (422)
++++ .....+. ....+.+.++... + -+.++.. .++++||.+.+|... .+.+|+|+. ++++|++++++.
T Consensus 280 ~~g~~~~~~~~~~rs~~ivsf~~~~~~--~--~~~~~~~-~L~~~gI~~~~g~~~--~g~iRiS~~~~~t~edId~l~~a 352 (361)
T 3m5u_A 280 SNGFYKGHADKKDRSLMNVSFNIAKNK--D--LEPLFVK-EAEEAGMIGLKGHRI--LGGIRASIYNALNLDQVKTLCEF 352 (361)
T ss_dssp STTSEEESSCGGGBCSSEEEEEESSCT--T--HHHHHHH-HHHHTTEECCBCCTT--TCSEEEECCTTSCHHHHHHHHHH
T ss_pred CCCeeeccCCHHHcCCeEEEEECCCch--h--hhHHHHH-HHHHCCCEEecCCCc--cCeEEEEccCCCCHHHHHHHHHH
Confidence 9766 3222221 2234555565300 0 1234554 457779999888653 256999998 689999999999
Q ss_pred HHHHHHHh
Q 014603 411 MKAFYDRH 418 (422)
Q Consensus 411 l~~~~~~~ 418 (422)
|+++.++.
T Consensus 353 l~~~~~~~ 360 (361)
T 3m5u_A 353 MKEFQGKY 360 (361)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhc
Confidence 99988763
No 223
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.92 E-value=5.4e-23 Score=206.41 Aligned_cols=314 Identities=12% Similarity=0.030 Sum_probs=206.5
Q ss_pred CCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHH-HhhCCCeEEEeec
Q 014603 85 STVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEAR-ATHSHLEVRHFDL 163 (422)
Q Consensus 85 ~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~-~~~~g~~~~~~~~ 163 (422)
+...+.++++.+|++++ .+ ..+++++|+++++.+++.+++++||+|+++.++|.++... +...|++++.++.
T Consensus 171 ~~~~i~e~e~~lA~~~g------ae-~~i~v~nGtt~an~~ai~al~~pGD~VLv~~~~H~S~~~~~~~l~Ga~~v~v~~ 243 (730)
T 1c4k_A 171 HEGPAVAAEKHAARVYN------AD-KTYFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYNSALAMAGGRPVYLQT 243 (730)
T ss_dssp TBTHHHHHHHHHHHHTT------CS-EEEEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHTTTTCCEEEEECE
T ss_pred ChHHHHHHHHHHHHHHC------CC-cEEEECCHHHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHCCCEEEEEeC
Confidence 33457899999999983 33 3577888889999999999999999999999999988777 7888999888776
Q ss_pred cCCCC----cccCHHHH-----HHhhcCC------c----eEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEccc
Q 014603 164 LPAKG----WEVDLDAV-----EALADEN------T----VALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEV 224 (422)
Q Consensus 164 ~~~~~----~~~d~~~l-----~~~~~~~------~----~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~ 224 (422)
... . +.+|++.| ++.++++ + +++++++| |++|.+. ++++|+++|+++|+++|+|++
T Consensus 244 ~~~-~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~---dl~~I~~la~~~g~~livDeA 318 (730)
T 1c4k_A 244 NRN-PYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIY---NAHEVVKRIGHLCDYIEFDSA 318 (730)
T ss_dssp EEC-TTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEE---CHHHHHHHHGGGBSEEEEECT
T ss_pred Ccc-ccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeec---CHHHHHHHHHHcCCeEEEEcc
Confidence 432 2 23688888 8888665 4 78899998 5899996 578889999999999999999
Q ss_pred cccc-ccCCCC----CCCccccCC-CCCeEEEecCccccCCCCcee-EEEEeeCCCCcccchhH--HHHHHhhh--hhcc
Q 014603 225 YDHL-AFGNTP----FVPMGVFGS-IVPVLTLGSISKRWIVPGWRL-GWLVTSDPNGILQDSGI--VDSIKSFL--NISS 293 (422)
Q Consensus 225 ~~~~-~~~~~~----~~~~~~~~~-~~~~i~i~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~--~~~~~~~~--~~~~ 293 (422)
|+.. .+.+.. ......++. +++++++.|+||++ +|++. |++++++... ...+.. ..++.... ..++
T Consensus 319 h~~~~~f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L--~g~~~gg~I~v~~~~l-~g~~~~i~~~~~~~~~~~~~st 395 (730)
T 1c4k_A 319 WVGYEQFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQ--AGFSQTSQIHKKDSHI-KGQLRYCDHKHFNNSFNLFMST 395 (730)
T ss_dssp TCCGGGSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHS--SCCTTCEEEEEECGGG-TTSTTCCCHHHHHHHHHHHSCS
T ss_pred cccccccCcccCCcCcccccccCCCCCCEEEEECCCCCC--CCCCCEEEEEecchhh-cCcccccCHHHHHHHHHHhCCC
Confidence 9742 333211 111112233 34579999999985 44444 5665654210 000000 12222222 2234
Q ss_pred CcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCCCCCC--------------------------
Q 014603 294 DPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKE-IPCITCPKKPE-------------------------- 346 (422)
Q Consensus 294 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~-------------------------- 346 (422)
+++....+++..+++......-.+..+++.++.+.+++.|++ ++++.+. .|.
T Consensus 396 sp~~~~iaal~aA~~~l~~~~g~~~~~~~~~~a~~lr~~L~~~i~g~~v~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (730)
T 1c4k_A 396 SPFYPMYAALDVNAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFRPF-VPPVVNGKKWEDGDTEDMANNIDYWRFEK 474 (730)
T ss_dssp SCCHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEES-SCSEETTEEGGGSCHHHHTTCGGGGBCCT
T ss_pred CCcHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhCCCeEEc-cccccccccccccccccccccchhhccCc
Confidence 666666666655555332223355567777888888888887 6676632 221
Q ss_pred -----------Cc-eE-----EEEecCcc-----c-ccCCCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cCh
Q 014603 347 -----------GS-MF-----VMVKLNYS-----L-LEGINSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEP 401 (422)
Q Consensus 347 -----------~g-~~-----~~~~~~~~-----~-~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~ 401 (422)
.+ ++ +.+.++.. . .....+..++...| +++||.+.... ...+|++++ +++
T Consensus 475 ~~~~~g~~~~~~~~~~idp~kv~i~~pg~~~~~g~~~~~g~~~~~l~~~L-~e~GI~v~~~~----~~~ir~~~s~g~t~ 549 (730)
T 1c4k_A 475 GAKWHAYEGYGDNQYYVDPNKFMLTTPGINPETGDYEDFGVPATIVANYL-RDHGIIPEKSD----LNSILFLMTPAETP 549 (730)
T ss_dssp TCTTTCCTTCCTTCEEECTTEEEEECSSEETTTTEECSSCCCHHHHHHHH-HHTTCCCSEEC----SSEEEEECCTTCCH
T ss_pred cchhccccccCCcccccCCeEEEEEeCCcccccccccccCCCHHHHHHHH-HHCCcEEEECC----CCeEEEEeCCCCCH
Confidence 11 11 34444310 0 01112456666665 55699886532 467899887 788
Q ss_pred HHHHHHHHHHHHHHHHhc
Q 014603 402 SALEDGLGRMKAFYDRHA 419 (422)
Q Consensus 402 ~~l~~~~~~l~~~~~~~~ 419 (422)
++++.+++.|.++.+++.
T Consensus 550 e~i~~Ll~aL~~i~~~~~ 567 (730)
T 1c4k_A 550 AKMNNLITQLLQLQRLIE 567 (730)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcc
Confidence 999999999999887663
No 224
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.91 E-value=2.4e-22 Score=190.39 Aligned_cols=254 Identities=15% Similarity=0.145 Sum_probs=180.1
Q ss_pred HHHHHHHHHHhhCC------CCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEE---ecCHHHHHHHHHHHhcCCCC
Q 014603 65 SVAVDAIVHSVRSA------RFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYL---TLGCTQAIEVILTVLARPGA 135 (422)
Q Consensus 65 ~~v~~a~~~~~~~~------~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~---~~g~~~a~~~~~~~l~~~gd 135 (422)
+.|.+++.+..... ....|+.. +..++++.++++++ .+..++ ++||++|+..++.++++|||
T Consensus 47 ~~Vl~a~~~~~~~~~~~~~~~gy~Y~~~-g~~~Le~~lA~l~g--------~e~alv~p~~~sGt~A~~~al~all~pGD 117 (427)
T 3hvy_A 47 LKVLKAFQEERISESHFTNSSGYGYNDI-GRDSLDRVYANIFN--------TESAFVRPHFVNGTHAIGAALFGNLRPND 117 (427)
T ss_dssp HHHHHHHHHTTCCGGGSCCCCTTCTTCH-HHHHHHHHHHHHHT--------CSEEEEETTCCSHHHHHHHHHHHTCCTTC
T ss_pred HHHHHHHHHHHHHHHhcccCcCCCCCch-hHHHHHHHHHHHhC--------CCceEEeCCCCcHHHHHHHHHHHhcCCCC
Confidence 57778887753321 12244443 57889999999983 234455 78999999999999999999
Q ss_pred EEEecC-CCccchH-----------HHHhhCCCeEEEeeccCCCCcccCHHHHHHhhc--CCceEEEEeC----CCCCcc
Q 014603 136 NILLPR-PGFPYYE-----------ARATHSHLEVRHFDLLPAKGWEVDLDAVEALAD--ENTVALVIIN----PGNPCG 197 (422)
Q Consensus 136 ~Vl~~~-~~~~~~~-----------~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~--~~~~~i~i~~----p~nptG 197 (422)
+|++++ +.|.++. ..++..|++++.++. +++.+|++.+++.++ ++++++++++ |+||+|
T Consensus 118 ~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~---~~~~~d~e~l~~~i~~~~~tklV~i~~s~gyp~nptg 194 (427)
T 3hvy_A 118 TMMSICGMPYDTLHDIIGMDDSKKVGSLREYGVKYKMVDL---KDGKVDINTVKEELKKDDSIKLIHIQRSTGYGWRKSL 194 (427)
T ss_dssp EEEECSSSCCGGGHHHHTCCTTCCSCCTGGGTCEEEECCC---BTTBCCHHHHHHHHHHCTTEEEEEEESSCCSSSSCCC
T ss_pred EEEEeCCCCchhHHHHhccccchhhhHHHHcCCEEEEecC---CCCCcCHHHHHHHhhCCCCCEEEEEECCCCCCCCccc
Confidence 999998 9998776 334557888888876 345789999999988 7899999999 999998
Q ss_pred cccCHHHHHHHHHHHHH--cCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCC-ceeEEEEeeCCCC
Q 014603 198 NVYTYQHLQKIAETAKK--LGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNG 274 (422)
Q Consensus 198 ~~~~~~~l~~i~~~~~~--~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G-~r~G~~~~~~~~~ 274 (422)
.+ .++++|+++|++ +|+++++|++|+.+.+... ++ ..+. .++++|+||++++.| .+.||++++
T Consensus 195 ~v---~dl~~i~~ia~~~~~g~~livD~a~~~~~~~~~---p~-~~ga---Div~~S~sK~lgg~g~~~GG~i~~~---- 260 (427)
T 3hvy_A 195 RI---AEIAEIIKSIREVNENVIVFVDNCYGEFVEEKE---PT-DVGA---DIIAGSLIKNIGGGIATTGGYIAGK---- 260 (427)
T ss_dssp CH---HHHHHHHHHHHHHCSSSEEEEECTTCTTTSSSC---GG-GGTC---SEEEEETTSGGGTTTCCSCEEEEEC----
T ss_pred cH---HHHHHHHHHHHHhCCCCEEEEECCccccccCCC---Cc-ccCC---eEEEECCcccccccccceEEEEEEC----
Confidence 87 789999999999 8999999999986543221 11 2222 389999999987665 456888875
Q ss_pred cccchhHHHHHHhhhhhc-----cCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCc-
Q 014603 275 ILQDSGIVDSIKSFLNIS-----SDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGS- 348 (422)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g- 348 (422)
+++++++....... .+++......+...+.. +..+.++..+++..+.+.|+++ ++. + .|...
T Consensus 261 ----~~li~~l~~~~~~~~~g~~~~~~~~~a~~~~~gl~~-----~~~r~~~~~~~a~~la~~L~~~-g~~-V-~p~~~~ 328 (427)
T 3hvy_A 261 ----EEYVTQATFRVTVPGIGGECGSTFGVMRSLYEGLFM-----APHVTIEAVKGAVFCARIMELA-GFD-V-LPKYND 328 (427)
T ss_dssp ----HHHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHT-TCE-E-ESCTTS
T ss_pred ----HHHHHHHHHHhhcCCcccccCCCHHHHHHHHHhHhH-----HHHHHHHHHHHHHHHHHHHHhC-CCe-e-cCCCCC
Confidence 57888887643211 11211113333333332 4567777888899999999988 444 2 23222
Q ss_pred ----eEEEEecC
Q 014603 349 ----MFVMVKLN 356 (422)
Q Consensus 349 ----~~~~~~~~ 356 (422)
..+.+.+.
T Consensus 329 ~~~~li~~~~l~ 340 (427)
T 3hvy_A 329 KRTDIIQAIKFN 340 (427)
T ss_dssp CCSSSEEEEECS
T ss_pred CCceEEEEEeCC
Confidence 25666664
No 225
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.91 E-value=3.4e-22 Score=188.74 Aligned_cols=241 Identities=17% Similarity=0.170 Sum_probs=175.1
Q ss_pred HHHHHHHHHHhhC------CCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEE---ecCHHHHHHHHHHHhcCCCC
Q 014603 65 SVAVDAIVHSVRS------ARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYL---TLGCTQAIEVILTVLARPGA 135 (422)
Q Consensus 65 ~~v~~a~~~~~~~------~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~---~~g~~~a~~~~~~~l~~~gd 135 (422)
.+|.++|.+.... .....|+. .+..++++.+|++++ .+..++ ++||++|+..++.+++++||
T Consensus 32 ~~vl~a~~~~~~~~~~~~~~~~~~y~~-~~~~~Le~~lA~l~g--------~e~alv~p~~~sGt~Ai~~al~all~~GD 102 (409)
T 3jzl_A 32 AKVLDAFQENKVSDFHFHPSTGYGYDD-EGRDTLERVYATVFK--------TEAALVRPQIISGTHAISTVLFGILRPDD 102 (409)
T ss_dssp HHHHHHHHHTTCCGGGGCCCCTTCTTC-HHHHHHHHHHHHHHT--------CSEEEEETTSCSHHHHHHHHHHHHCCTTC
T ss_pred HHHHHHHHHhhhhhhccCCCcCCCCCh-hHHHHHHHHHHHHhC--------CCcEEEECCCccHHHHHHHHHHHhcCCCC
Confidence 4677777775321 11224444 356789999999983 234455 88999999999999999999
Q ss_pred EEEecC-CCccchHH----------HHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeC----CCCCccccc
Q 014603 136 NILLPR-PGFPYYEA----------RATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIIN----PGNPCGNVY 200 (422)
Q Consensus 136 ~Vl~~~-~~~~~~~~----------~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~----p~nptG~~~ 200 (422)
+|+++. +.|..+.. .++..|++++.++.++ ++.+|++.+++.++++++++++++ |+||+|.+
T Consensus 103 ~Vl~~~~~~y~~~~~~~~~~g~~~~~l~~~G~~~~~v~~~~--~g~~d~e~l~~ai~~~tklV~i~~s~g~p~nptg~v- 179 (409)
T 3jzl_A 103 ELLYITGQPYDTLEEIVGIRKQGQGSLKDFHIGYSSVPLLE--NGDVDFPRIAKKMTPKTKMIGIQRSRGYADRPSFTI- 179 (409)
T ss_dssp EEEECSSSCCTTHHHHHTSSSSSSSCTGGGTCEEEECCCCT--TSCCCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCH-
T ss_pred EEEEeCCCCcHhHHHHHhcccchhhHHHHcCCEEEEeCCCC--CCCcCHHHHHHhccCCCeEEEEECCCCCCCCCcCcc-
Confidence 999998 99988764 3456788888888753 456899999999998999999999 99999988
Q ss_pred CHHHHHHHHHHHHH--cCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCC-ceeEEEEeeCCCCccc
Q 014603 201 TYQHLQKIAETAKK--LGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQ 277 (422)
Q Consensus 201 ~~~~l~~i~~~~~~--~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G-~r~G~~~~~~~~~~~~ 277 (422)
.++++|+++|++ +|+++|+|++|+.+.+... + ...+. .++++|+||.++++| .+.||++++
T Consensus 180 --~~l~~I~~la~~~~~~~~livD~a~~~~~~~~~---p-~~~g~---Div~~S~sK~lgg~~~~~GG~v~~~------- 243 (409)
T 3jzl_A 180 --EKIKEMIVFVKNINPEVIVFVDNCYGEFVEYQE---P-PEVGA---DIIAGSLIKNPGGGLAKTGGYIAGK------- 243 (409)
T ss_dssp --HHHHHHHHHHHHHCTTCEEEEECTTCTTTSSCC---S-GGGTC---SEEEEETTSGGGTTTCSSCEEEEEC-------
T ss_pred --ccHHHHHHHHHhhCCCCEEEEeCCcccccccCC---c-cccCC---eEEEECccccCCccCCceEEEEEeC-------
Confidence 789999999999 9999999999986543211 1 12233 389999999987766 446888885
Q ss_pred chhHHHHHHhhhhh-----ccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 014603 278 DSGIVDSIKSFLNI-----SSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCIT 340 (422)
Q Consensus 278 ~~~~~~~~~~~~~~-----~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 340 (422)
+++++++...... ...+....+.++...+.. +..+.++..+++..+.+.|+++ ++.
T Consensus 244 -~~li~~l~~~~~~~~~g~~~g~~~~~~~~~l~gl~~-----~~~r~~~~~~~a~~la~~L~~~-g~~ 304 (409)
T 3jzl_A 244 -EALVDLCGYRLTTPGIGREAGASLYSLLEMYQGFFL-----APHVTAQAIKGARFTAAMLAEF-GVE 304 (409)
T ss_dssp -HHHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHT-TCE
T ss_pred -HHHHHHHHHHhccccccccccccHHHHHHHHHHHhh-----HHHHHHHHHHHHHHHHHHHHhC-CCc
Confidence 5788888764321 112222113333333432 4566777888899999999988 444
No 226
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.91 E-value=4.7e-22 Score=188.33 Aligned_cols=255 Identities=16% Similarity=0.162 Sum_probs=180.1
Q ss_pred HHHHHHHHHHhhCC------CCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEE---ecCHHHHHHHHHHHhcCCCC
Q 014603 65 SVAVDAIVHSVRSA------RFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYL---TLGCTQAIEVILTVLARPGA 135 (422)
Q Consensus 65 ~~v~~a~~~~~~~~------~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~---~~g~~~a~~~~~~~l~~~gd 135 (422)
+.|.+++.+..... ....|+. .+..++++.+|++++ . +..++ ++||++|+..++.+++++||
T Consensus 46 ~~Vl~A~~~~~~~~~~~~~~~gy~y~~-~~~~~Le~~lA~l~g------~--e~alv~p~~~sGt~Ai~~al~all~pGD 116 (427)
T 3i16_A 46 LKVLNAFQEERISEAHFTNSSGYGYGD-IGRDSLDAVYARVFN------T--ESALVRPHFVNGTHALGAALFGNLRPGN 116 (427)
T ss_dssp HHHHHHHHHTTCCGGGSCCCCTTCTTC-HHHHHHHHHHHHHHT------C--SEEEEETTCCSHHHHHHHHHHHHCCTTC
T ss_pred HHHHHHHHHhchhHHhcCCCCCCCCCH-HHHHHHHHHHHHHhC------C--cceEEeCCCccHHHHHHHHHHHHhCCCC
Confidence 56777777643211 1123443 356889999999983 2 33344 88999999999999999999
Q ss_pred EEEecC-CCccchHH-----------HHhhCCCeEEEeeccCCCCcccCHHHHHHhhc--CCceEEEEeC----CCCCcc
Q 014603 136 NILLPR-PGFPYYEA-----------RATHSHLEVRHFDLLPAKGWEVDLDAVEALAD--ENTVALVIIN----PGNPCG 197 (422)
Q Consensus 136 ~Vl~~~-~~~~~~~~-----------~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~--~~~~~i~i~~----p~nptG 197 (422)
+|++++ +.|.++.. .++..|++++.++.+. ++.+|++.+++.++ ++++++++++ |+||+|
T Consensus 117 ~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~~~--~g~~D~e~l~~~l~~~~~tklV~i~~s~~~p~nptg 194 (427)
T 3i16_A 117 TMLSVCGEPYDTLHDVIGITENSNMGSLKEFGINYKQVDLKE--DGKPNLEEIEKVLKEDESITLVHIQRSTGYGWRRAL 194 (427)
T ss_dssp EEEESSSSCCGGGHHHHTCSCCCSSCCTGGGTCEEEECCCCT--TSSCCHHHHHHHHHTCTTEEEEEEECSCCSSSSCCC
T ss_pred EEEEeCCCccHHHHHHHhccccchHHHHHHcCCEEEEecCcc--CCCcCHHHHHHHhhCCCCCEEEEEEcCCCCCCCCcc
Confidence 999999 99987763 3456688888888753 34689999999998 7899999999 999999
Q ss_pred cccCHHHHHHHHHHHHH--cCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCC-ceeEEEEeeCCCC
Q 014603 198 NVYTYQHLQKIAETAKK--LGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNG 274 (422)
Q Consensus 198 ~~~~~~~l~~i~~~~~~--~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G-~r~G~~~~~~~~~ 274 (422)
.+ .++++|+++|++ +|+++++|++|+.+.+... +. ..+. .++++|+||.++++| .+.||++++
T Consensus 195 ~i---~dl~~i~~la~~~~~g~~livD~a~~~~~~~~~---p~-~~ga---Div~~S~sK~lgg~g~~~gG~i~~~---- 260 (427)
T 3i16_A 195 LI---EDIKSIVDCVKNIRKDIICFVDNCYGEFMDTKE---PT-DVGA---DLIAGSLIKNIGGGIAPTGGYLAGT---- 260 (427)
T ss_dssp CH---HHHHHHHHHHHHHCTTSEEEEECTTTTTSSSSC---GG-GGTC---SEEEEETTSGGGTTTCCSCEEEEEC----
T ss_pred cH---HHHHHHHHHHHHhCCCCEEEEECCCccccccCC---cc-ccCC---eEEEecCcccCCCCCCceEEEEEEC----
Confidence 88 789999999999 9999999999987543221 11 2232 389999999987766 667999885
Q ss_pred cccchhHHHHHHhhhhh---ccCcch-HH-HHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCc-
Q 014603 275 ILQDSGIVDSIKSFLNI---SSDPAT-FI-QGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGS- 348 (422)
Q Consensus 275 ~~~~~~~~~~~~~~~~~---~~~~~~-~~-~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g- 348 (422)
+++++++...... .....+ +. ...+...+. .+..+.++..+++..+.+.|+++ ++. + .|...
T Consensus 261 ----~~li~~l~~~~~~~~~g~~~~~~~~~a~~~l~gl~-----~~~~r~~~~~~~a~~la~~L~~~-g~~-V-~p~~~~ 328 (427)
T 3i16_A 261 ----KDCIEKTSYRLTVPGIGGECGSTFGVVRSMYQGLF-----LAPHISMEALKGAILCSRIMELA-GFE-V-MPKYDE 328 (427)
T ss_dssp ----HHHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHT-TCE-E-ESCTTS
T ss_pred ----HHHHHHHHHhcccCccCccCCccHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHhC-CCe-e-cCCCCC
Confidence 5788888764321 111111 22 233333332 25667788888999999999988 444 2 33322
Q ss_pred ----eEEEEecC
Q 014603 349 ----MFVMVKLN 356 (422)
Q Consensus 349 ----~~~~~~~~ 356 (422)
..+.+.+.
T Consensus 329 ~~~~~i~~i~l~ 340 (427)
T 3i16_A 329 KRSDIIQSIKFN 340 (427)
T ss_dssp CCSSSCEEEECS
T ss_pred CCccEEEEEEEC
Confidence 25556664
No 227
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.90 E-value=6e-22 Score=188.12 Aligned_cols=337 Identities=12% Similarity=0.068 Sum_probs=211.2
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 122 (422)
+|+.+|||..|......+ ..+|+|.+|+.+++...... ..+.....++.+.+++.+. ..+.++|+++|++|
T Consensus 85 dG~~ylD~~~g~~~~~lG-H~hp~v~~Av~~q~~~~~~~-~~~~~~~~~lae~l~~~~p-------~~~~v~f~~SGsEA 155 (454)
T 4ao9_A 85 DGHRYADFIAEYTAGVYG-HSAPEIRDAVIEAMQGGINL-TGHNLLEGRLARLICERFP-------QIEQLRFTNSGTEA 155 (454)
T ss_dssp TCCEEEESSGGGGTTTTC-SCCHHHHHHHHHHHHTCSCC-CSEESSHHHHHHHHHHHST-------TCSEEEEESSHHHH
T ss_pred CCCEEEEccccHHhhccc-CCCHHHHHHHHHHHhcCCCc-cCCcHHHHHHHHHHHHhCC-------CCCEEEEeCchHHH
Confidence 588899998876543233 46799999999999874322 2223344566677766652 46799999999999
Q ss_pred HHHHHHHhcC--CCCEEEecCCCccchHHHHhhC----C--CeEEEeeccCCCCcccCHHHHHHhhcC--CceEEEEeCC
Q 014603 123 IEVILTVLAR--PGANILLPRPGFPYYEARATHS----H--LEVRHFDLLPAKGWEVDLDAVEALADE--NTVALVIINP 192 (422)
Q Consensus 123 ~~~~~~~l~~--~gd~Vl~~~~~~~~~~~~~~~~----g--~~~~~~~~~~~~~~~~d~~~l~~~~~~--~~~~i~i~~p 192 (422)
++.+++.... ..++|+..+.+|++....+... . .....+|. -|++.+++.+.+ ...+.+|..|
T Consensus 156 ~e~AiklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~p~-------nd~~~l~~~l~~~~~~iAavIvEP 228 (454)
T 4ao9_A 156 NLMALTAALHFTGRRKIVVFSGGYHGGVLGFGARPSPTTVPFDFLVLPY-------NDAQTARAQIERHGPEIAVVLVEP 228 (454)
T ss_dssp HHHHHHHHHHHHTCCEEEEETTCBCSTTCBBSSSBCTTSCCSEEEEECT-------TCHHHHHHHHHHTGGGEEEEEECS
T ss_pred HHHHHHHHHhcccCCeEEEEeCCcCCccccccccccCccCCCCcccCCC-------chHHHHHHHHhhcCCceEEEEecc
Confidence 9999886532 3378999999998754322111 1 11222221 267888877753 2355667777
Q ss_pred -CCCcccc-cCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEee
Q 014603 193 -GNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTS 270 (422)
Q Consensus 193 -~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~ 270 (422)
+...|.+ ++++.+++|.++|++||+++|+||++.+ +.|... ....++..++++ +++|.+ ..|+++|++.++
T Consensus 229 v~g~~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~tG--R~G~~~-a~e~~gv~PDi~---t~gK~l-ggG~Piga~~~~ 301 (454)
T 4ao9_A 229 MQGASGCIPGQPDFLQALRESATQVGALLVFDEVMTS--RLAPHG-LANKLGIRSDLT---TLGKYI-GGGMSFGAFGGR 301 (454)
T ss_dssp EESTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTGG--GGSTTC-HHHHHTCCCSEE---EEEGGG-GTTSSCEEEEEC
T ss_pred ccCCCCccCCchhhHHHHHHHHhhcCCEEEEECCCcC--CCcccc-chhccCCCCcEE---Eecccc-CCCCcceeeeeH
Confidence 5556754 5678899999999999999999999984 444332 123334334444 446995 568999999986
Q ss_pred CCCCcccchhHHHHHHhh-----hhhccCcchHHHHHHHHHHhhch-HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC
Q 014603 271 DPNGILQDSGIVDSIKSF-----LNISSDPATFIQGAVPQILEKTE-EEFFSKITDILRETADICCDRLKEIPCITCPKK 344 (422)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 344 (422)
+++++.+... ...+.+.++++++++.+.|+... ++.+++..+.-...++.|.+.+++.+-+. . .
T Consensus 302 --------~ei~~~~~~~~~~~~h~~T~~gnPla~AAala~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~-~-v 371 (454)
T 4ao9_A 302 --------ADVMALFDPRTGPLAHSGTFNNNVMTMAAGYAGLTKLFTPEAAGALAERGEALRARLNALCANEGVAM-Q-F 371 (454)
T ss_dssp --------HHHHGGGCTTTCSCCCCCTTTTCHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHTBSC-E-E
T ss_pred --------HHHHHHHhhccCCccccCCCCCCHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHhhCCCCE-E-E
Confidence 4677766442 12345678899999999888644 33334333333334444444334443221 1 1
Q ss_pred CCCceEEEEecCcccc---cC--CCCH---HHHHHHHHHhcCeEEecCCCCCCCCeEEEEeccChHHHHHHHHHHHHHHH
Q 014603 345 PEGSMFVMVKLNYSLL---EG--INSD---MEFALKLAKEESVIVLPGITVGLKDWLRITFAVEPSALEDGLGRMKAFYD 416 (422)
Q Consensus 345 ~~~g~~~~~~~~~~~~---~~--~~~~---~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~l~~~~~~l~~~~~ 416 (422)
..-|.++.+.+..... .. ..+. ..+...+ .++||++.|.. .+.+++.+++++|++++++|++++.
T Consensus 372 rg~G~m~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~l-l~~Gv~~~p~~------~~~~s~~~T~~dId~~l~al~~~l~ 444 (454)
T 4ao9_A 372 TGIGSLMNAHFVQGDVRSSEDLAAVDGRLRQLLFFHL-LNEDIYSSPRG------FVVLSLPLTDADIDRYVAAIGSFIG 444 (454)
T ss_dssp EEETTEEEEESCCSCCCSGGGGTTCCHHHHHHHHHHH-HHTTEECCTTC------EEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred eeeceEEEEEEecCCCCCHHHHHhhhHHHHHHHHHHH-HHCCEEEcCCC------CEEEeCCCCHHHHHHHHHHHHHHHH
Confidence 2224455555532110 00 0011 2233444 45699998743 3455666899999999999999998
Q ss_pred Hhc
Q 014603 417 RHA 419 (422)
Q Consensus 417 ~~~ 419 (422)
++.
T Consensus 445 ~~~ 447 (454)
T 4ao9_A 445 GHG 447 (454)
T ss_dssp HSG
T ss_pred hcc
Confidence 864
No 228
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.89 E-value=6.1e-22 Score=188.65 Aligned_cols=263 Identities=17% Similarity=0.167 Sum_probs=175.6
Q ss_pred HHHHHHHHHHhhCCC----C--CCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEE
Q 014603 65 SVAVDAIVHSVRSAR----F--NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANIL 138 (422)
Q Consensus 65 ~~v~~a~~~~~~~~~----~--~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl 138 (422)
+.+.+++.+...... . ..|+. .+..++++.+++++ |......+++++ ||++|+..++.+++++||+|+
T Consensus 38 ~~vl~A~~~~~~~~~~~~~~~g~~y~~-~~~~~l~~~la~~~----g~~~~~~~i~~~-sGt~Ai~~al~al~~~Gd~Vl 111 (431)
T 3ht4_A 38 FRVLESFGKHKISDSHFIPTTGYGYDD-IGRDTLEKVYADVF----GAEAGLVRPQII-SGTHAISTALFGILRPGDELL 111 (431)
T ss_dssp HHHHHHHHHTTCCGGGSCCCCTTCCSC-HHHHHHHHHHHHHT----TCSEECCBTTSC-SHHHHHHHHHHTTCCTTCEEE
T ss_pred HHHHHHHHHhchhhhhcCCCCCCCCCh-hhHHHHHHHHHHHh----CCCcccccceee-CHHHHHHHHHHHhCCCCCEEE
Confidence 577777776532211 1 12222 22345555555555 322112222344 779999999999999999999
Q ss_pred ecC-CCccchHHHH----------hhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEe-CCCCCcccccCHHHHH
Q 014603 139 LPR-PGFPYYEARA----------THSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVII-NPGNPCGNVYTYQHLQ 206 (422)
Q Consensus 139 ~~~-~~~~~~~~~~----------~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~-~p~nptG~~~~~~~l~ 206 (422)
++. +.|..+...+ +..|.+++.++.++ ++.+|++.|++.+++++++++++ +|+||+|...+.++++
T Consensus 112 ~~~~~~y~~~~~~~~l~g~~~~~~~~~G~~~~~v~~~~--~~~~d~e~l~~~l~~~tk~V~i~~sp~np~~~~~~~~~l~ 189 (431)
T 3ht4_A 112 YITGKPYDTLEEIVGVRGKGVGSFKEYNIGYNAVPLTE--GGLVDFEAVAAAIHSNTKMIGIQRSKGYATRPSFTISQIK 189 (431)
T ss_dssp ECSSSCCTTHHHHTTSSSCSSSCSGGGTCEEEECCBCT--TSSBCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCHHHHH
T ss_pred EeCCCCchhHHHHHhhcccccchHHHcCCEEEEeCCCC--CCCcCHHHHHhhcCCCCeEEEEECCCCCCCCCcCCHHHHH
Confidence 998 9998877554 34688888888754 36789999999999899999999 5899999999999999
Q ss_pred HHHHHHHH--cCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCC-CCceeEEEEeeCCCCcccchhHHH
Q 014603 207 KIAETAKK--LGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIV-PGWRLGWLVTSDPNGILQDSGIVD 283 (422)
Q Consensus 207 ~i~~~~~~--~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~-~G~r~G~~~~~~~~~~~~~~~~~~ 283 (422)
+|+++|++ +|+++|+|++|+.+.+... + ..++.+ ++++|+||.+++ .++..||++++ +++++
T Consensus 190 ~i~~la~~~~~~~~livDea~~~~~~~~~---~-~~~g~D---i~~~S~sK~lgg~~~~~GG~v~~~--------~~li~ 254 (431)
T 3ht4_A 190 EMIAFVKEIKPDVVVFVDNCYGEFIEEQE---P-CHVGAD---LMAGSLIKNPGGGIVKTGGYIVGK--------EQYVE 254 (431)
T ss_dssp HHHHHHHHHCTTCEEEEECTTCTTSSSCC---G-GGTTCS---EEEEETTSGGGTTTCSSCEEEEEC--------HHHHH
T ss_pred HHHHHHHhhCCCCEEEEeCCChhhccCCC---c-cccCCe---EEEcCccccCCCCCCCceEEEEec--------HHHHH
Confidence 99999999 9999999999998765332 1 122332 899999999654 22444999985 57777
Q ss_pred HHHhhhhh-----ccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC---CCCCCceEEEEec
Q 014603 284 SIKSFLNI-----SSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCP---KKPEGSMFVMVKL 355 (422)
Q Consensus 284 ~~~~~~~~-----~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~---~~~~~g~~~~~~~ 355 (422)
++...... ...++.....++...+.. +..+.++..++.+.+.+.|+++ ++.+. ..+..+....+.+
T Consensus 255 ~l~~~~~~~~~g~~~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~a~~l~~~L~~~-g~~v~p~~~~~~~~li~~i~l 328 (431)
T 3ht4_A 255 ACAYRLTSPGIGAEAGASLYSLQEMYQGFFL-----APHVAGQALKGAIFTAAFLEKL-GMNTSPAWNAPRTDLIQSVQF 328 (431)
T ss_dssp HHHHHHSCTTTTTSCSCCCSCSHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHH-TCCEESCTTSCCSSSCCEEEC
T ss_pred HHHHHhccCCcccccCccHHHHHHHHhHhhh-----HHHHHHHHHHHHHHHHHHHHhC-cCEecCCCCCCCccEEEEEEe
Confidence 77664321 112211213333333332 4556677778888888888876 44421 1122233555666
Q ss_pred C
Q 014603 356 N 356 (422)
Q Consensus 356 ~ 356 (422)
+
T Consensus 329 ~ 329 (431)
T 3ht4_A 329 D 329 (431)
T ss_dssp C
T ss_pred C
Confidence 5
No 229
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.89 E-value=1.1e-21 Score=198.79 Aligned_cols=307 Identities=10% Similarity=0.021 Sum_probs=199.2
Q ss_pred CCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCC
Q 014603 88 GILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAK 167 (422)
Q Consensus 88 g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 167 (422)
.+.++++.++++++ .+ +.+++++|+++++.+++.+++++||+|+++.++|.++...+...|++++.++...+
T Consensus 206 ~v~~~ee~la~l~G------~d-~~i~~~~Gtt~a~~~~i~al~~~GD~Vlv~~~~h~s~~~~~~~~G~~~v~v~~~~~- 277 (755)
T 2vyc_A 206 AFGESEKYAARVFG------AD-RSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLMLTGAKPVYMVPSRN- 277 (755)
T ss_dssp HHHHHHHHHHHHHT------CS-EEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHHCCEEEEECCCBC-
T ss_pred HHHHHHHHHHHHhC------CC-ceEEECCcHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEEeCCCC-
Confidence 35788888888883 23 45788888899999999999999999999999999988888889999988876532
Q ss_pred Ccc----c-----CHHHHHHhhcC--Cce--------EEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEccccccc
Q 014603 168 GWE----V-----DLDAVEALADE--NTV--------ALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHL 228 (422)
Q Consensus 168 ~~~----~-----d~~~l~~~~~~--~~~--------~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~ 228 (422)
.++ + |++.|++++++ +++ ++++++| ||+|.+. ++++|+++|+++|+++++|++|+..
T Consensus 278 ~~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~---dl~~I~~ia~~~~~~livDeA~~~~ 353 (755)
T 2vyc_A 278 RYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCY---NAKEAQDLLEKTSDRLHFDEAWYGY 353 (755)
T ss_dssp TTSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEE---CHHHHHHHHTTTCSEEEEECTTCTT
T ss_pred ccccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceec---CHHHHHHHHHHcCCEEEEECcCchh
Confidence 222 4 89999998853 333 8889998 7999996 4788899999999999999999743
Q ss_pred -ccCCC--CCCCccc--cC-CCCCeEEEecCccccCCCCce-eEEEEeeCCCCcccchhHHHHHHhhh--hhccCcchHH
Q 014603 229 -AFGNT--PFVPMGV--FG-SIVPVLTLGSISKRWIVPGWR-LGWLVTSDPNGILQDSGIVDSIKSFL--NISSDPATFI 299 (422)
Q Consensus 229 -~~~~~--~~~~~~~--~~-~~~~~i~i~s~sK~~~~~G~r-~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 299 (422)
.+.+. +..++.. .+ .+++++++.|+||++ +|++ .|++++++.....+ ..++.... ..+++++...
T Consensus 354 ~~~~~~~~~~~~~~g~~aD~~~~~~iv~~S~hK~L--~g~~~g~~i~~~~~~~~i~----~~~~~~~~~~~~s~sp~~~~ 427 (755)
T 2vyc_A 354 ARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLL--NALSQASYIHVREGRGAIN----FSRFNQAYMMHATTSPLYAI 427 (755)
T ss_dssp GGGCGGGTTSSSSCSCCCCCSSBEEEEEEETTTSS--SCCTTCEEEEEECCBTCCC----HHHHHHHHHHTSCSSCCHHH
T ss_pred cccCcccCCcchhcCCcCCccCCCeEEEECccccc--cCcCCeeeeeecCcccccC----HHHHHHHHHHhCCCCHHHHH
Confidence 23221 1122211 12 234578999999985 4544 56777765310110 12222221 2234667666
Q ss_pred HHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCC---------CCCCCCCC------------------------
Q 014603 300 QGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPC---------ITCPKKPE------------------------ 346 (422)
Q Consensus 300 ~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~---------~~~~~~~~------------------------ 346 (422)
.+++..+++.......+++.+++.++.+.+++.|+++++ ++++ .|.
T Consensus 428 iaal~aA~~~l~~~gg~~~~~~~~~~a~~~r~~L~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (755)
T 2vyc_A 428 CASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPW-NKEVVTDPQTGKTYDFADAPTKLLTTV 506 (755)
T ss_dssp HHHHHHHHHHHSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEES-SCSEEECTTTCCEEEGGGSCHHHHHHC
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccccccccccceeecc-Cchhccccccccccccccccchhccch
Confidence 666666665322222344555556666666666655433 3211 111
Q ss_pred -------------------Cc------eEEEEecCcccccC-----CCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEE
Q 014603 347 -------------------GS------MFVMVKLNYSLLEG-----INSDMEFALKLAKEESVIVLPGITVGLKDWLRIT 396 (422)
Q Consensus 347 -------------------~g------~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis 396 (422)
.+ .-+.+.++.....| ..++.++...| +++||.+... ..+.+|++
T Consensus 507 ~~~~~~~~~~~~h~~~~~~~~~~~~Dp~~v~i~~~~~~~~G~~~~~g~~~~~l~~~L-~~~gI~~e~~----~~~~v~~~ 581 (755)
T 2vyc_A 507 QDCWVMHPGESWHGFKDIPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWL-GRHGIVPTRT----TDFQIMFL 581 (755)
T ss_dssp GGGTBCCTTCTTTCCTTCCTTSEEECTTEEEEECSCBCTTSSBCSSCCCHHHHHHHH-HTTTCCCSEE----CSSEEEEE
T ss_pred hhhhccCcccccccccccCCCccccCCeEEEEEcCCCCCCCCccccCCcHHHHHHHH-HHCCCEEeec----CCCeEEEE
Confidence 11 12334443211111 12445665554 6689887543 25789999
Q ss_pred ec--cChHHHHHHHHHHHHHHHHh
Q 014603 397 FA--VEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 397 ~~--~~~~~l~~~~~~l~~~~~~~ 418 (422)
++ .++++++.+++.|.++.+.+
T Consensus 582 ~~~g~t~~~~~~l~~al~~~~~~~ 605 (755)
T 2vyc_A 582 FSMGVTRGKWGTLVNTLCSFKRHY 605 (755)
T ss_dssp CCTTCCTTTTHHHHHHHHHHHHHH
T ss_pred ECCCCCHHHHHHHHHHHHHHHHhh
Confidence 97 68899999999999887665
No 230
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=99.89 E-value=2.8e-21 Score=185.09 Aligned_cols=351 Identities=13% Similarity=0.096 Sum_probs=217.7
Q ss_pred cCCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCC-CCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHH
Q 014603 42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTV-GILPARRAIADYLNRDLPYKLSPDDVYLTLGCT 120 (422)
Q Consensus 42 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~-g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~ 120 (422)
.+|+.+|||..|......+ ..+|++.+|+.+++.+.. .|.... ...+....+|+.|.+.. +.+.+.|+|+++|+
T Consensus 64 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~Ai~~q~~~l~--~~~~~~~~~~~~~~~lAe~L~~~~--p~~~~~v~f~~sGs 138 (473)
T 4e3q_A 64 VNGRRYLDANSGLWNMVAG-FDHKGLIDAAKAQYERFP--GYHAFFGRMSDQTVMLSEKLVEVS--PFDSGRVFYTNSGS 138 (473)
T ss_dssp TTCCEEEETTTTTTTCTTC-SCCHHHHHHHHHHHHHCC--CCCCCTTEEEHHHHHHHHHHHHHS--SCSSCEEEEESSHH
T ss_pred CCCCEEEEcccCHHHhhcc-CCCHHHHHHHHHHHHhcc--cccccccccCHHHHHHHHHHHhhC--CCCccEEEEeCchH
Confidence 3689999999887554333 357899999999987632 222111 11233334555554432 33456899999999
Q ss_pred HHHHHHHHHhc-------CCC-CEEEecCCCccchHHHHhh-CCC-----------eEEEeeccCC---CCcccC-----
Q 014603 121 QAIEVILTVLA-------RPG-ANILLPRPGFPYYEARATH-SHL-----------EVRHFDLLPA---KGWEVD----- 172 (422)
Q Consensus 121 ~a~~~~~~~l~-------~~g-d~Vl~~~~~~~~~~~~~~~-~g~-----------~~~~~~~~~~---~~~~~d----- 172 (422)
+|++.+++... +++ .+|+....+||+....+.. .+. ....++.... ......
T Consensus 139 EA~e~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~tg~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 218 (473)
T 4e3q_A 139 EANDTMVKMLWFLHAAEGKPQKRKILTRWNAYHGVTAVSASMTGKPYNSVFGLPLPGFVHLTCPHYWRYGEEGETEEQFV 218 (473)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCGGGGGGTCSCTTEEEECCCCHHHHSCTTCCHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCcceEEEeeceECCCccccccccccccccccCCCCCcccccCCCcccccccccchhhHHH
Confidence 99999988642 133 5789999999886443322 111 1222221100 000011
Q ss_pred ---HHHHHHhhc---CCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCC
Q 014603 173 ---LDAVEALAD---ENTVALVIINP-GNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSI 244 (422)
Q Consensus 173 ---~~~l~~~~~---~~~~~i~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~ 244 (422)
.+++++.+. ++..+.++..| +...|.+ ++++.+++|.++|++||+++|.||++.++.++|... ....++..
T Consensus 219 ~~~~~~l~~~i~~~~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~tGfGRtG~~f-a~e~~gv~ 297 (473)
T 4e3q_A 219 ARLARELEETIQREGADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVICGFGRTGNTW-GCVTYDFT 297 (473)
T ss_dssp HHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEECTTTSSSTTSSSC-HHHHTTCC
T ss_pred HHHHHHHHHHHHhhCCCceEEEEeCCccCCCCceeCCHHHHHHHHHHhcccceEEeccCccccCCcccchh-HHHhcCCC
Confidence 123444332 34567778888 5556764 667889999999999999999999999988877643 23334444
Q ss_pred CCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhh--------hhhccCcchHHHHHHHHHHhhchHHHHH
Q 014603 245 VPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSF--------LNISSDPATFIQGAVPQILEKTEEEFFS 316 (422)
Q Consensus 245 ~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~a~~~~l~~~~~~~~~ 316 (422)
+++++ ++|.++..++++|.++++ +++.+.+... ...+.+.++++++++.+.|+...++.
T Consensus 298 PDi~t---~~K~l~gG~~Pl~av~~~--------~~i~~~~~~~~~~~~~~~hg~T~~Gnpla~Aaala~L~~i~~~~-- 364 (473)
T 4e3q_A 298 PDAII---SSKNLTAGFFPMGAVILG--------PELSKRLETAIEAIEEFPHGFTASGHPVGCAIALKAIDVVMNEG-- 364 (473)
T ss_dssp CSEEE---ECGGGGTTSSCCEEEEEC--------HHHHHHHHHHHHHHSCCCCCCTTTTCHHHHHHHHHHHHHHHHSS--
T ss_pred CChHH---hcccccCCCCCccccccc--------HHHHHHhccccccccccccCCCCCCCcchhhhhhhhhhhhcccc--
Confidence 44444 469965444999999986 5777777543 12345778999999999988644322
Q ss_pred HHHHHHHHHHHHHHHHhhc---CCCCCCCCCCCCceEEEEecCcccc-----cCCCC-HHHHHHHHHHhcCeEEecCCCC
Q 014603 317 KITDILRETADICCDRLKE---IPCITCPKKPEGSMFVMVKLNYSLL-----EGINS-DMEFALKLAKEESVIVLPGITV 387 (422)
Q Consensus 317 ~~~~~~~~~~~~l~~~L~~---~~~~~~~~~~~~g~~~~~~~~~~~~-----~~~~~-~~~~~~~l~~~~gi~v~~g~~~ 387 (422)
..+++++.-+++.+.|++ .|.+. - ...-|.++.+.+..... ..... ...+.. .+.++|+++.|.
T Consensus 365 -l~~~~~~~g~~l~~~L~~l~~~~~v~-~-vRG~Gl~~gielv~~~~~~~~~~~~~~~~~~~~~-~~~~~Gll~~~~--- 437 (473)
T 4e3q_A 365 -LAENVRRLAPRFEERLKHIAERPNIG-E-YRGIGFMWALEAVKDKASKTPFDGNLSVSERIAN-TCTDLGLICRPL--- 437 (473)
T ss_dssp -HHHHHHHHHHHHHHHHHHHTTSTTEE-E-EEEETTEEEEEECSBTTTTBCCCGGGCHHHHHHH-HHHHTTEECEEE---
T ss_pred -HHHHHHHHHHHHHHHHHHHhcCCCee-E-EeecceEEEEEEecCccccccccccHHHHHHHHH-HHHHCCcEEEec---
Confidence 233344444555555544 34432 1 12235666666532110 00001 233444 456679999874
Q ss_pred CCCCeEEEEec--cChHHHHHHHHHHHHHHHHhcc
Q 014603 388 GLKDWLRITFA--VEPSALEDGLGRMKAFYDRHAK 420 (422)
Q Consensus 388 ~~~~~iRis~~--~~~~~l~~~~~~l~~~~~~~~~ 420 (422)
.+.+|+++. .+++++++++++|++++++..+
T Consensus 438 --g~~i~l~PPL~it~~eid~~~~~l~~al~~v~a 470 (473)
T 4e3q_A 438 --GQSVVLCPPFILTEAQMDEMFDKLEKALDKVFA 470 (473)
T ss_dssp --TTEEEECCCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred --CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 368999876 7899999999999999988654
No 231
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=99.89 E-value=5.4e-21 Score=182.46 Aligned_cols=351 Identities=17% Similarity=0.163 Sum_probs=214.2
Q ss_pred CCCCceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCC--CCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHH
Q 014603 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFN--CYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT 120 (422)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~--~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~ 120 (422)
+|+.+|||..|......+ ..+|++.+|+.+++...... .+.+.....++.+.+++.. + ....+.++|+++|+
T Consensus 62 dG~~ylD~~~g~~~~~lG-h~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~----p-~~~~~~v~f~~sGs 135 (456)
T 4atq_A 62 DGNSFIDLGSGIAVTSVG-ASDPAVVAAVQEAAAHFTHTCFMVTPYEGYVAVTEQLNRLT----P-GDHAKRTVLFNSGA 135 (456)
T ss_dssp TSCEEEESSHHHHTCTTC-TTCHHHHHHHHHHHHHCSCCTTTTSCCHHHHHHHHHHHHHS----S-CSSCEEEEEESSHH
T ss_pred CCCEEEEccccHHHHhcC-CCCHHHHHHHHHHHhhccCcccCccCcHHHHHHHHHHHHhC----C-CCCCcEEEEeCChH
Confidence 488899998875432222 45799999999998763221 1222222223444444443 2 11346799999999
Q ss_pred HHHHHHHHHhc--CCCCEEEecCCCccchHHHHhh-CC-------------CeEEEeeccCC----CCcccCHHH-----
Q 014603 121 QAIEVILTVLA--RPGANILLPRPGFPYYEARATH-SH-------------LEVRHFDLLPA----KGWEVDLDA----- 175 (422)
Q Consensus 121 ~a~~~~~~~l~--~~gd~Vl~~~~~~~~~~~~~~~-~g-------------~~~~~~~~~~~----~~~~~d~~~----- 175 (422)
+|++.+++... ....+|+....+||+....+.. .+ ..+..+|.... .....+.+.
T Consensus 136 EA~e~AlklAr~~t~r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 215 (456)
T 4atq_A 136 EAVENAVKVARLATGRDAVVAFDHAYHGRTNLTMALTAKAMPYKTNFGPFAPEVYRMPMSYPFREENPEITGAEAAKRAI 215 (456)
T ss_dssp HHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCGGGCSSTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHhhhhcCCeEEEEecccCCccccccccccCccccccCCCCccccceecccccccccCCCcccHHHHHHHHH
Confidence 99999987642 2347899999999987543322 11 12333432110 000112222
Q ss_pred --HHHhhcCCceEEEEeCC-CCCccc-ccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEe
Q 014603 176 --VEALADENTVALVIINP-GNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLG 251 (422)
Q Consensus 176 --l~~~~~~~~~~i~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~ 251 (422)
+++.+..+..+.+|..| +...|. .++++.+++|.++|++||+++|+||++.++.++|... ....++..+++++
T Consensus 216 ~~~e~~~~~~~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tG~GRtG~~~-a~e~~gv~PDivt-- 292 (456)
T 4atq_A 216 TMIEKQIGGDQVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQSGFCRTGEWF-AVDHEGVVPDIIT-- 292 (456)
T ss_dssp HHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGTTCCCSEEE--
T ss_pred HHHHHhhcCCceEEEEeccccCCCCccccchhhhHHHHHHHhhcCCceEecccccccCCccccc-cccccCCCCchhh--
Confidence 22333345677777888 455665 4677889999999999999999999999988887643 3444444444444
Q ss_pred cCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhh-hhccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHH
Q 014603 252 SISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICC 330 (422)
Q Consensus 252 s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~ 330 (422)
++|.+ ..|+++|.++++ +++++.+.... ..+++.++++++++.+.|+...++.+ .++.++.-+++.
T Consensus 293 -~gK~l-ggg~P~~av~~~--------~~i~~~~~~~~~~~Tf~gnpla~aaala~L~~i~~~~l---~~~~~~~g~~l~ 359 (456)
T 4atq_A 293 -MAKGI-AGGLPLSAITGR--------ADLLDAVHPGGLGGTYGGNPVACAAALAAIDTMEQHDL---NGRARHIEELAL 359 (456)
T ss_dssp -ECGGG-GTTSSCEEEEEE--------HHHHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHHTTH---HHHHHHHHHHHH
T ss_pred -hhhcc-cCcCCceeeEec--------HHHHhcccccCCCCCCCCChHHHHhhHHHHHHHhhccH---HHHHHHHHHHHH
Confidence 46994 678999999986 46666665443 34568899999999999987543322 223333333333
Q ss_pred HHh----hcCCCC--CCCC-CCCCceEEEEecCcccccCC--CCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--c
Q 014603 331 DRL----KEIPCI--TCPK-KPEGSMFVMVKLNYSLLEGI--NSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--V 399 (422)
Q Consensus 331 ~~L----~~~~~~--~~~~-~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~ 399 (422)
+.| ++++.. .++. ...-|.++.+.+........ .....+... +.++|+++.++... .+.+|+.+. .
T Consensus 360 ~~L~~l~~~~~~~~~~~v~~VRG~Gl~~giel~~~~~~~~~~~~~~~v~~~-~~~~Gvl~~~~g~~--~~~irl~PpL~i 436 (456)
T 4atq_A 360 GKLRELAAELSAGGGSVVGDIRGRGAMLAIELVQPGSKEPNAELTKAVAAA-CLKEGVIILTCGTY--GNVIRLLPPLVI 436 (456)
T ss_dssp HHHHHHHHHCC-----CEEEEEEETTEEEEEEBCTTSCCBCHHHHHHHHHH-HHHTTEECEEECTT--SCEEEECCCTTC
T ss_pred HHHHHHHHhcccccCCceEEeeecceEEEEEEecCCCCCcCHHHHHHHHHH-HHHCCCEEEecCCC--CCEEEEECCCCC
Confidence 333 333211 1010 11236677777643211100 012334444 45679998765322 478999987 6
Q ss_pred ChHHHHHHHHHHHHHHHHh
Q 014603 400 EPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 400 ~~~~l~~~~~~l~~~~~~~ 418 (422)
+++++++++++|+++++.+
T Consensus 437 t~~~id~~l~~l~~al~a~ 455 (456)
T 4atq_A 437 SDELLIDGLEVLAAAIKAH 455 (456)
T ss_dssp CHHHHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHHHHhh
Confidence 8999999999999999754
No 232
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.84 E-value=3.2e-19 Score=177.58 Aligned_cols=307 Identities=13% Similarity=0.040 Sum_probs=190.1
Q ss_pred CCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeec
Q 014603 84 SSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDL 163 (422)
Q Consensus 84 ~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~ 163 (422)
.+...+.++++.+|++++. ...+++++|++.|+.+++.+++++||+|+++.++|.++...+...|+.++.++.
T Consensus 192 ~~~g~i~eaE~~lA~~fGa-------~~a~~v~nGts~An~~ai~al~~pGD~VLv~r~~H~S~~~~l~lsGa~pv~v~~ 264 (715)
T 3n75_A 192 DHSGPHKEAEQYIARVFNA-------DRSYMVTNGTSTANKIVGMYSAPAGSTILIDRNCHKSLTHLMMMSDVTPIYFRP 264 (715)
T ss_dssp TTBTHHHHHHHHHHHHHTC-------SEEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHSCCEEEEECC
T ss_pred CCcHHHHHHHHHHHHHhCC-------CCceEECcHHHHHHHHHHHHhCCCCCEEEECCCccHHHHHHHHHcCCEEEEEec
Confidence 3445578999999999942 234566777789999999999999999999999999999999999999988876
Q ss_pred cCCCCccc---------CHHHHHHhhcC--Cce---EEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccc
Q 014603 164 LPAKGWEV---------DLDAVEALADE--NTV---ALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLA 229 (422)
Q Consensus 164 ~~~~~~~~---------d~~~l~~~~~~--~~~---~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~ 229 (422)
..+ .+++ |++.|++++++ +++ ++++++| |++|.+++ +++|.++|+.++ +++||+|+...
T Consensus 265 ~~~-~~gi~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~p-n~~G~v~d---l~~I~ela~~~~--livDEAH~~~~ 337 (715)
T 3n75_A 265 TRN-AYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYN---TDFIKKTLDVKS--IHFDSAWVPYT 337 (715)
T ss_dssp CBC-TTCCBCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESS-CTTSEEEC---HHHHHHHCCCSE--EEEECTTCTTG
T ss_pred ccc-ccccccCcccccCCHHHHHHHHhhCcCccCceEEEEECC-CCCCccCC---HHHHHHHhCcCc--EEEcccccccc
Confidence 532 3443 89999998863 334 7899999 99999975 556666676653 78999998543
Q ss_pred -cCCCCCCCccccCC---CCC-eEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhh--hccCcchHHHHH
Q 014603 230 -FGNTPFVPMGVFGS---IVP-VLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN--ISSDPATFIQGA 302 (422)
Q Consensus 230 -~~~~~~~~~~~~~~---~~~-~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~a 302 (422)
+.+... ....+.. .+. ++++.|+||++++. ...|++++++.. ...++..... .+++++.+..++
T Consensus 338 ~f~~~~~-~~~al~~g~~aD~vii~~~S~hKtL~gl-tqgs~i~v~~~i-------~~~~~~~~~~~~~STSpsy~~~As 408 (715)
T 3n75_A 338 NFSPIYE-GKCGMSGGRVEGKVIYETQSTHKLLAAF-SQASMIHVKGDV-------NEETFNEAYMMHTTTSPHYGIVAS 408 (715)
T ss_dssp GGSGGGT-TSSTTSSSCCTTCEEEEEECHHHHSSCC-TTCEEEEEESCC-------CHHHHHHHHHHTSCSSCCHHHHHH
T ss_pred ccCCccc-cccccccCcCCCEEEEEEecccccccCC-CCeeEEEeCchh-------hHHHHHHHHHhhcCCCchHHHHHH
Confidence 332111 1112211 122 35689999996442 024888886531 1222333322 245677777777
Q ss_pred HHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCC------CCCCCC------------C----------CCc------
Q 014603 303 VPQILEKTEEEFFSKITDILRETADICCDRLKEIPC------ITCPKK------------P----------EGS------ 348 (422)
Q Consensus 303 ~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~------~~~~~~------------~----------~~g------ 348 (422)
+..+++......-.++++++.++.+.+++.|+++++ +.++.. | ..+
T Consensus 409 ldaA~~~~~~~~g~~~~~~l~~~a~~~r~~L~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~gf~~~~~~~~~~Dp 488 (715)
T 3n75_A 409 TETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDP 488 (715)
T ss_dssp HHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCEESSCSCCCSCSCEECCTTCCTTCCTTCCSSSEEECT
T ss_pred HHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhhcccceeeccCcccccchhhhccCcccccccccccccCcccCCC
Confidence 776665432212344556666666777776665432 121100 0 001
Q ss_pred eEEEEecCcccccC-----CCCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEe--ccChHHHHHHHHHHHHHHHHh
Q 014603 349 MFVMVKLNYSLLEG-----INSDMEFALKLAKEESVIVLPGITVGLKDWLRITF--AVEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 349 ~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~--~~~~~~l~~~~~~l~~~~~~~ 418 (422)
.=+.+.++.-...| .....++... |+++||.+.-.. ...+-+-+ +.++++++.+++.|.++-+.+
T Consensus 489 ~Kl~i~~~~~~~~G~~~~~Gi~g~~~~~~-L~~~~I~~E~~d----~~~vl~l~s~g~~~~~~~~L~~aL~~~~~~~ 560 (715)
T 3n75_A 489 IKVTLLTPGMEKDGTMSDFGIPASIVAKY-LDEHGIVVEKTG----PYNLLFLFSIGIDKTKALSLLRALTDFKRAF 560 (715)
T ss_dssp TEEEEECSCBCTTSCBCSSCCCHHHHHHH-HHHTTCCCSEEE----TTEEEEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEcCCCCCCCccccCCCcHHHHHHH-HHHCCCEEEecC----CCcEEEEeCCCCCHHHHHHHHHHHHHHHHHh
Confidence 11222332210001 1244555554 477798875543 23343333 468889999998888765543
No 233
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=99.82 E-value=2.6e-20 Score=189.97 Aligned_cols=348 Identities=12% Similarity=0.076 Sum_probs=208.8
Q ss_pred CceeecCCCCCCCCCCCCcHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCC-CCCEEEecCHHHHHH
Q 014603 46 PLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLS-PDDVYLTLGCTQAIE 124 (422)
Q Consensus 46 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~-~~~i~~~~g~~~a~~ 124 (422)
.++|+..|.-....++..+|++.+|+.+++..-....+.. ...+....+++.|.+..+ .. .+.++|+++|++|++
T Consensus 381 ~ylD~~sg~~~~~lGh~~~p~i~~Ai~~Q~~~l~h~~~~~--~~~~~~~~Lae~L~~~~p--~~~l~~vff~~SGSeA~E 456 (831)
T 4a0g_A 381 QQFDACASWWTQGPDPTFQAELAREMGYTAARFGHVMFPE--NVYEPALKCAELLLDGVG--KGWASRVYFSDNGSTAIE 456 (831)
T ss_dssp EEEETTHHHHTCCCCHHHHHHHHHHHHHHHHHHSSCCCTT--EECHHHHHHHHHHHHTTT--TTTCCEEEEESSHHHHHH
T ss_pred heeeecccHhhcCCCCCCCHHHHHHHHHHHhhcccccccc--cCCHHHHHHHHHHHHhCC--CCCCCEEEECCChhHHHH
Confidence 6788887743322222227999999999987622111111 112333345555544322 12 468999999999999
Q ss_pred HHHHHhc-----CC------------CCEEEecCCCccchHHHHhhC-CC---------------eE-------------
Q 014603 125 VILTVLA-----RP------------GANILLPRPGFPYYEARATHS-HL---------------EV------------- 158 (422)
Q Consensus 125 ~~~~~l~-----~~------------gd~Vl~~~~~~~~~~~~~~~~-g~---------------~~------------- 158 (422)
.+++... .. ..+|+....+||+....+... |. .+
T Consensus 457 ~AlK~A~r~~~~~~g~~~~~~~~~~~r~~iI~~~~syHG~T~gals~tg~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 536 (831)
T 4a0g_A 457 IALKMAFRKFCVDHNFCEATEEEKHIVVKVIALRGSYHGDTLGAMEAQAPSPYTGFLQQPWYTGRGLFLDPPTVFLSNGS 536 (831)
T ss_dssp HHHHHHHHHHHHTTTC---------CCEEEEEETTCCCCSSHHHHHTSCCCGGGSTTTCTTCCCCEEEECCCEEEEETTE
T ss_pred HHHHHHHHHHHhhcCCCccccccccCccEEEEecCCcccCceeeeeccCccccccccccccccCCccccCCccccccCCc
Confidence 9987652 12 237888999998764433322 21 00
Q ss_pred EEeeccCC------CCccc-C------------------HHHHHHhhc-------CCceEEEEeCC--CCCcccc-cCHH
Q 014603 159 RHFDLLPA------KGWEV-D------------------LDAVEALAD-------ENTVALVIINP--GNPCGNV-YTYQ 203 (422)
Q Consensus 159 ~~~~~~~~------~~~~~-d------------------~~~l~~~~~-------~~~~~i~i~~p--~nptG~~-~~~~ 203 (422)
..++.... +.... + .+.|++.+. .+..+.++..| ++..|.. +|++
T Consensus 537 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~ 616 (831)
T 4a0g_A 537 WNISLPESFSEIAPEYGTFTSRDEIFDKSRDASTLARIYSAYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPL 616 (831)
T ss_dssp EEEECCTTSCCCCSSTTEESCHHHHHCGGGGGSHHHHHHHHHHHHHC---------CEEEEEEECCSEETTTTSEEECHH
T ss_pred eEecCCccccccccccccccchhhhhcccccchhhhHHHHHHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCccCCHH
Confidence 01111100 00000 1 245666664 24566677777 5777764 6888
Q ss_pred HHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCC-ceeEEEEeeCCCCcccchhHH
Q 014603 204 HLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDSGIV 282 (422)
Q Consensus 204 ~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~ 282 (422)
.+++|.++|++||+++|+||++.++.++|..+ ....++..++++ +++|.++. | +++|+++++ ++++
T Consensus 617 ~L~~l~~lc~~~gilLI~DEV~tGfGRtG~~f-a~e~~gv~PDii---tlsK~L~g-G~~Plgav~~~--------~~i~ 683 (831)
T 4a0g_A 617 FQRVLVNECRNRKIPVIFDEVFTGFWRLGVET-TTELLGCKPDIA---CFAKLLTG-GMVPLAVTLAT--------DAVF 683 (831)
T ss_dssp HHHHHHHHHHHTTCCEEEECTTTTTTTTSBSS-THHHHSSCCSEE---EECGGGGT-TSSCCEEEEEC--------HHHH
T ss_pred HHHHHHHHHHHcCCeEEEEcCccccccCCCch-hhHhcCCCCcEE---EEeccccc-CccCcEEEEEC--------HHHH
Confidence 99999999999999999999999988887654 333444434433 57899654 6 899999996 4677
Q ss_pred HHHHhh-------hhhccCcchHHHHHHHHHHhhchHH-HHHHHH---HHHHH-HHHHHHHHhhcCCCCCCCCCCCCceE
Q 014603 283 DSIKSF-------LNISSDPATFIQGAVPQILEKTEEE-FFSKIT---DILRE-TADICCDRLKEIPCITCPKKPEGSMF 350 (422)
Q Consensus 283 ~~~~~~-------~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~---~~~~~-~~~~l~~~L~~~~~~~~~~~~~~g~~ 350 (422)
+.+... ...+.+.++++++++.++|+...++ ..++.. +++++ ..+.+.+.+++.|.+. . ....|.+
T Consensus 684 ~~~~~~~~~~~~~hg~T~~g~Pla~Aaala~L~~i~~~~l~~~~~~~~~~l~~~l~~~l~~~l~~~~~v~-~-vrg~Gl~ 761 (831)
T 4a0g_A 684 DSFSGDSKLKALLHGHSYSAHAMGCATAAKAIQWFKDPETNHNITSQGKTLRELWDEELVQQISSHSAVQ-R-VVVIGTL 761 (831)
T ss_dssp HTTCSSCGGGSCCCCCTTTTCHHHHHHHHHHHHHHHCTTTCTTBCTTSSBBCCCSCHHHHHHHHHSTTEE-E-EEEETTE
T ss_pred HHHhcccccccceeecCCcccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCce-e-EeecccE
Confidence 766542 2244577889999999988753211 111111 11111 1223445566666554 2 1233667
Q ss_pred EEEecCcccc-cCC--CCHHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHHHHHHHHHh
Q 014603 351 VMVKLNYSLL-EGI--NSDMEFALKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 351 ~~~~~~~~~~-~~~--~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~l~~~~~~~ 418 (422)
+.+.+..... ... ....++...+ .++||++.|+ .+.+|+++. +++++|++++++|.++++++
T Consensus 762 ~~iel~~~~~~~~~~~~~a~~~~~~l-~e~Gv~v~p~-----g~~lrl~pp~~~t~e~id~~~~~l~~~l~~l 828 (831)
T 4a0g_A 762 FALELKADASNSGYASLYAKSLLIML-REDGIFTRPL-----GNVIYLMCGPCTSPEICRRLLTKLYKRLGEF 828 (831)
T ss_dssp EEEEEC---------CHHHHHHHHHH-HHTTEECCCB-----TTEEEEECCTTCCHHHHHHHHHHHHHHHTTT
T ss_pred EEEEEecCccccccchHHHHHHHHHH-HHCCcEEEec-----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence 7777643100 000 0133455554 5679999885 378999965 79999999999999998765
No 234
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.80 E-value=7.6e-18 Score=155.92 Aligned_cols=310 Identities=13% Similarity=0.075 Sum_probs=195.5
Q ss_pred HHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCC----CCEEEecCCCccchHHHHhhCCCeEEEeeccC-CCC
Q 014603 94 RAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARP----GANILLPRPGFPYYEARATHSHLEVRHFDLLP-AKG 168 (422)
Q Consensus 94 ~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~----gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~ 168 (422)
..+.+|+... |++ .....++++|+|.++.+++.+.+++ +|+|+++..+|.+...+....|+.+++++... .+.
T Consensus 120 ~l~ld~L~~~-G~~-~~~~~flVnGsTgg~lamilaa~r~~rpg~d~VIvpRn~HKSv~kAliL~Gl~Pv~V~p~~d~~~ 197 (501)
T 3hl2_A 120 SLVLDIIKLA-GVH-TVANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMITAGFEPVVIENVLEGDE 197 (501)
T ss_dssp HHHHHHHHHT-TCT-TCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECEEEETTE
T ss_pred HHHHHHHHHc-CCC-CCCcEEEECcHHHHHHHHHHHHcCcccCCCCEEEEecchHHHHHHHHHHcCCeEEEEeeeecccc
Confidence 3444666553 544 2346889999997777777666553 49999999999999999999999998886522 235
Q ss_pred cccCHHHHHHhhcC---CceEEEEeCC-CCCcccccCHHHHHHHHHHHHHcCcEEEEcccccccc-cCCCCCCCccccC-
Q 014603 169 WEVDLDAVEALADE---NTVALVIINP-GNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLA-FGNTPFVPMGVFG- 242 (422)
Q Consensus 169 ~~~d~~~l~~~~~~---~~~~i~i~~p-~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~-~~~~~~~~~~~~~- 242 (422)
..+|++.+++++++ +.++++++++ .|..+.+ +++++|+++|++||+++++|+||+... +....+.....++
T Consensus 198 ~~id~e~le~aI~e~ga~~i~~V~~Ttt~y~p~~~---ddI~eIaeIch~~gIpllVDeAhGah~~~~~~lp~sA~~~Gr 274 (501)
T 3hl2_A 198 LRTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVP---DRLEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGARVGR 274 (501)
T ss_dssp EEECHHHHHHHHHHHCGGGEEEEEEECSCCTTBCC---CCHHHHHHHHHHHTCCEEEECTTCTTCHHHHHHHHHHHHHSC
T ss_pred cCCCHHHHHHHHHhcCCCcEEEEEecCCCCCCccc---ccHHHHHHHHHHcCCeEEEeCcchhhhhhhhhhHHHHHhcCC
Confidence 78899999998854 3455555555 4434455 689999999999999999999997632 1000011111223
Q ss_pred CCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhhhccCcchHHHHHHHHHHhhchHHHHHHHHHHH
Q 014603 243 SIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQGAVPQILEKTEEEFFSKITDIL 322 (422)
Q Consensus 243 ~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~ 322 (422)
.| +++.|.+|.+..+ +..|.+...+ +++.+++.... .++.+....+.+...+.+.....+.+..++.
T Consensus 275 AD---~vVqS~HK~llvp-IGG~ii~~~d-------~e~l~~~~~~y--PGr~S~Spsldl~~tLL~lGr~Gy~~ll~e~ 341 (501)
T 3hl2_A 275 ID---AFVQSLDKNFMVP-VGGAIIAGFN-------DSFIQEISKMY--PGRASASPSLDVLITLLSLGSNGYKKLLKER 341 (501)
T ss_dssp CC---EEEEEHHHHHCCC-SSCEEEEESC-------HHHHHHHHHTS--CSCBCSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred Cc---EEEecccccceee-cCceEEEeCC-------HHHHHHHHHhC--CCCCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33 7888999997655 2234444543 45666553322 1222233333233333334456678888888
Q ss_pred HHHHHHHHHHhhcCC---CCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHhcCe---E-EecCC----------
Q 014603 323 RETADICCDRLKEIP---CITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKEESV---I-VLPGI---------- 385 (422)
Q Consensus 323 ~~~~~~l~~~L~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi---~-v~~g~---------- 385 (422)
.++.+++.+.|+++. +-.+...|.+...+-+.+............++-..| -..+| - |.+|.
T Consensus 342 ~ela~~L~~~L~~la~~~ge~ll~~~~n~is~a~tl~~~~~~~~~~~t~~gs~L-f~r~vsG~Rvv~~~~~~~i~g~~f~ 420 (501)
T 3hl2_A 342 KEMFSYLSNQIKKLSEAYNERLLHTPHNPISLAMTLKTLDEHRDKAVTQLGSML-FTRQVSGARVVPLGSMQTVSGYTFR 420 (501)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCBCCCTTCSSEEEEECTTSCTTTSCHHHHHHHHH-HHTTCCSCEEECTTCCEEETTEEES
T ss_pred HHHHHHHHHHHHHHHHhcChhhcCCCCCceeEEEecccccccccccHHHHHHHH-HhcCCCcceeecCCCceEECCeeec
Confidence 899999999888742 333344666666666666542111111123333333 33344 3 34444
Q ss_pred CCCC------CCeEEEEec--cChHHHHHHHHHHHHHHHHhcccC
Q 014603 386 TVGL------KDWLRITFA--VEPSALEDGLGRMKAFYDRHAKKQ 422 (422)
Q Consensus 386 ~~~~------~~~iRis~~--~~~~~l~~~~~~l~~~~~~~~~~~ 422 (422)
.|+. ..++-++.+ ++++|++.++++|++++.++++++
T Consensus 421 ~~g~h~~~~~~~yl~~a~aiG~~~~~v~~~~~~l~~~~~~~~~~~ 465 (501)
T 3hl2_A 421 GFMSHTNNYPCAYLNAASAIGMKMQDVDLFIKRLDRCLKAVRKER 465 (501)
T ss_dssp STTTTSSCCSSCEEEEECCTTCCHHHHHHHHHHHHHHHHHHHC--
T ss_pred CcccCCCCCCchHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 3332 346666665 899999999999999999987763
No 235
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=99.76 E-value=5.5e-16 Score=142.92 Aligned_cols=333 Identities=14% Similarity=0.072 Sum_probs=208.3
Q ss_pred CCcHHHHHHHHHHhhCCCCCCCCC------CCCCHHHHHHHHHHHhhcCCCCCCCC----CEEEecCHHHHHHHHHHHhc
Q 014603 62 RTASVAVDAIVHSVRSARFNCYSS------TVGILPARRAIADYLNRDLPYKLSPD----DVYLTLGCTQAIEVILTVLA 131 (422)
Q Consensus 62 ~~~~~v~~a~~~~~~~~~~~~y~~------~~g~~~lr~~ia~~l~~~~~~~~~~~----~i~~~~g~~~a~~~~~~~l~ 131 (422)
-.++.|++++-..+.+...-+|+- -..+.+++....+...+.++ .+.. +|. -.||+.|+.+++.+++
T Consensus 65 ~~S~aV~~a~gS~ltnKYaEGyPg~RyYgGce~vD~iE~la~~rak~lF~--a~~A~w~VNVQ-P~SGs~AN~avy~All 141 (490)
T 3ou5_A 65 FCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFD--LDPAQWGVNVQ-PYSGSPANLAVYTALL 141 (490)
T ss_dssp CCCHHHHHHHTSGGGTCCCCC----------CHHHHHHHHHHHHHHHHTT--CCTTTEEEECC-CSSHHHHHHHHHHHHC
T ss_pred cCCHHHHHHhcCcccccccCCCCCccccCCChHHHHHHHHHHHHHHHHhC--CCccccCCCCC-cCCHHHHHHHHHHHHc
Confidence 356899999988887654444442 22355666666666666665 2332 233 3467889999999999
Q ss_pred CCCCEEEecCCCccchHHHH--------hhCC--CeEEEeeccCCCCcccCHHHHHHhhcC-CceEEEEeCCCCCccccc
Q 014603 132 RPGANILLPRPGFPYYEARA--------THSH--LEVRHFDLLPAKGWEVDLDAVEALADE-NTVALVIINPGNPCGNVY 200 (422)
Q Consensus 132 ~~gd~Vl~~~~~~~~~~~~~--------~~~g--~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~i~~p~nptG~~~ 200 (422)
+|||+|+..+..+.+..... ...| .+...++++++ +..+|.+++++...+ ++++|++-....|-=.
T Consensus 142 ~PGD~ilg~~l~~GGHltHg~~~~~~~v~~sg~~~~~~~Y~vd~~-t~~IDyd~~~~~A~~~kPklIi~G~SaY~r~i-- 218 (490)
T 3ou5_A 142 QPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPK-TGLIDYNQLALTARLFRPRLIIAGTSAYARLI-- 218 (490)
T ss_dssp C-CCCEECBC----------------------------CBCEETT-TTEECHHHHHHHHHHHCCSEEEECCSSCCSCC--
T ss_pred CCCCEEEecccCCCCcccccccCCCcccccccccccccccccCCC-CCcccHHHHHHHHhhcCCCeEEECCccCcccc--
Confidence 99999999888775542211 1122 24455666553 457999999986644 6777765444443322
Q ss_pred CHHHHHHHHHHHHHcCcEEEEccccc-ccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEeeCCCCccc--
Q 014603 201 TYQHLQKIAETAKKLGIMVIADEVYD-HLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQ-- 277 (422)
Q Consensus 201 ~~~~l~~i~~~~~~~~~~li~D~~~~-~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~-- 277 (422)
+++++.++|++-|.++++|.+|. ++.-.|..+.++.. .| ++.+|.+|+ +.|.|.|.+++++.....+
T Consensus 219 ---d~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~psP~~~--AD---vVTtTTHKT--LrGPrGG~Il~~~~~~~~~~k 288 (490)
T 3ou5_A 219 ---DYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKH--AD---IVTTTTHKT--LRGARSGLIFYRKGVKAVDPK 288 (490)
T ss_dssp ---CHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGT--CS---EEEEESSST--TCSCSCEEEEEECSEEEECC-
T ss_pred ---CHHHHHHHHhhcccEEEechhhhhhhhcccccCCcccc--ce---EEecccccc--ccCCCceEEEecccccccccc
Confidence 47888999999999999999985 44445555555543 22 888899999 4788889999875210000
Q ss_pred -----chhHHHHHHhhhh--hccCcchHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCceE
Q 014603 278 -----DSGIVDSIKSFLN--ISSDPATFIQGAVPQILEKTEEEFFSKITDILRETADICCDRLKEIPCITCPKKPEGSMF 350 (422)
Q Consensus 278 -----~~~~~~~~~~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~ 350 (422)
..++.+++..... ..++|.....++...++.+.....++...+++.++.+.|.+.|.+. |+.++........
T Consensus 289 ~~~~~~~~~~kkin~aVFPg~qggp~~h~IAAkAVaf~Ea~~p~fk~Ya~qVv~NAkaLA~~L~~~-G~~vvsGgTdnHl 367 (490)
T 3ou5_A 289 TGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLER-GYSLVSGGTDNHL 367 (490)
T ss_dssp -CCEEECCCHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSE
T ss_pred ccchhHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCCCceE
Confidence 0145566665543 3345555555555555655445567888899999999999999988 7775544444566
Q ss_pred EEEecCcccccCCCCHHHHHHHHHHhcCeEEe----cCCCC-CCCCeEEEEec------cChHHHHHHHHHHHHHHH
Q 014603 351 VMVKLNYSLLEGINSDMEFALKLAKEESVIVL----PGITV-GLKDWLRITFA------VEPSALEDGLGRMKAFYD 416 (422)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~----~g~~~-~~~~~iRis~~------~~~~~l~~~~~~l~~~~~ 416 (422)
+++.+.... -....++.+|++.||.+. |+... ...+.|||... ..++|++++.+.|.+++.
T Consensus 368 vLvDl~~~g-----~tG~~ae~~Le~agItvNkN~iP~D~sp~~~SGiRiGTpa~TtRG~~e~dm~~IA~~I~~~l~ 439 (490)
T 3ou5_A 368 VLVDLRPKG-----LDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVN 439 (490)
T ss_dssp EEEECGGGT-----CCHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred EEEeccccC-----CCHHHHHHHHHHcCcEECCCCCCCCCCCCCCCeeEECCHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 777774321 133455667788899887 44321 12567999985 457899988888888764
No 236
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.72 E-value=5.2e-16 Score=145.83 Aligned_cols=314 Identities=11% Similarity=0.034 Sum_probs=184.6
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcC----CCCEEEecCCCccchHHHHhhCCCeEEEeeccC
Q 014603 90 LPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLAR----PGANILLPRPGFPYYEARATHSHLEVRHFDLLP 165 (422)
Q Consensus 90 ~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~----~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~ 165 (422)
..+.+.+..++.+..|.+ +....++++|+|.+..+++.+.++ +++.|+++..+|.+...++...|++++.++..+
T Consensus 97 ~~~e~~~~~~~~~~lGlp-~~~~~~lV~GaT~~~~a~~L~aar~~~~~~~~viv~r~aHkSv~kAl~l~Gl~p~~v~~~~ 175 (450)
T 3bc8_A 97 NKITNSLVLNVIKLAGVH-SVASCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMVTAGFEPVVIENVL 175 (450)
T ss_dssp HHHHHHHHHHHHHHHTCT-TCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECCEE
T ss_pred HHHHHHHHHHHHHhCCCC-CCceEEEECCHHHHHHHHHHHHcchhhcCCCEEEEECCcHHHHHHHHHHcCCeeEEEEeee
Confidence 345555555555544533 223468888888555544444333 379999999999999999999999988886532
Q ss_pred -CCCcccCHHHHHHhhcC---CceEEEEeCCC-CCcccccCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccc
Q 014603 166 -AKGWEVDLDAVEALADE---NTVALVIINPG-NPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGV 240 (422)
Q Consensus 166 -~~~~~~d~~~l~~~~~~---~~~~i~i~~p~-nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~ 240 (422)
++.+.+|++.|++++++ +.+++++.+|+ +.+|.+ +++++|+++|++||+++++|++|+........ .+-..
T Consensus 176 ~~~~~~id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~---ddl~~Ia~ia~~~gi~l~VD~A~G~~~~~~~~-l~~~a 251 (450)
T 3bc8_A 176 EGDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVP---DRLEELAVICANYDIPHVVNNAYGLQSSKCMH-LIQQG 251 (450)
T ss_dssp ETTEEECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCC---CCHHHHHHHHHHHTCCEEEECTTTTTCHHHHH-HHHHH
T ss_pred cCccCCcCHHHHHHHHHhcCCCCEEEEEEECCcCCCcee---cCHHHHHHHHHHCCCeEEEECCCchhhhhhHh-HHHHH
Confidence 23578999999998854 35677777774 455666 78999999999999999999999853211000 00011
Q ss_pred c---CCCCCeEEEecCccccCCCCceeEEEEeeCCCCcccchhHHHHHHhhhhhccCcchHHHHHHHHHHhhchHHHHHH
Q 014603 241 F---GSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQGAVPQILEKTEEEFFSK 317 (422)
Q Consensus 241 ~---~~~~~~i~i~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~ 317 (422)
+ ..| .++.|.+|++. .....+++..++ ++..+++........+.+ ++.......+. ...+.+.+
T Consensus 252 ~~~~~AD---~~v~S~HK~l~-a~~~~~~l~~rd-------~~~~~~~~~~~~g~~s~S-psL~l~~~l~~-~G~~g~~~ 318 (450)
T 3bc8_A 252 ARVGRID---AFVQSLDKNFM-VPVGGAIIAGFN-------EPFIQDISKMYPGRASAS-PSLDVLITLLS-LGCSGYRK 318 (450)
T ss_dssp HHHSCCC---EEEEEHHHHHS-CCSSCEEEEESC-------HHHHHHHHHHSCSCBCSH-HHHHHHHHHHH-HHHHHHHH
T ss_pred hcccCCC---EEEECCccCCC-chhccEEEEecC-------HHHHHHHHHHhhcCCccc-HHHHHHHHHHH-HHHHHHHH
Confidence 2 122 67789999954 334467777654 445555543321111122 22222222222 23455666
Q ss_pred HHHHHHHHHHHHHHHhhcCC---CCCCCCCCCCceEEEEecCcccccCCCCHHHHHHHHHHh--cCeEEec-C-------
Q 014603 318 ITDILRETADICCDRLKEIP---CITCPKKPEGSMFVMVKLNYSLLEGINSDMEFALKLAKE--ESVIVLP-G------- 384 (422)
Q Consensus 318 ~~~~~~~~~~~l~~~L~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~gi~v~~-g------- 384 (422)
..++..++.+++++.|++++ +..+...+..+.-..+.++........+...+...+... .|..+.+ |
T Consensus 319 ~i~~~~~~a~~l~~~l~~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~~~~D~tkl~i~~~~~g~sG~~v~~~~~~~~~~~ 398 (450)
T 3bc8_A 319 LLKERKEMFVYLSTQLKKLAEAHNERLLQTPHNPISLAMTLKTIDGHHDKAVTQLGSMLFTRQVSGARAVPLGNVQTVSG 398 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCBCCCTTCSSEEEEECTTTSSSSSCHHHHHHHHHHHTTCCSCEEECSCCEEEETT
T ss_pred HHHHHHHHHHHHHHHHHhhHHhcCceecCCccCCCcceeecccccccccCCCceeEEEecCCCCccceeeecccccchhH
Confidence 76777777888888887766 665443333221222223211000001334444443221 1333331 0
Q ss_pred C---CCC------CCCeEEEEec--cChHHHHHHHHHHHHHHHHhccc
Q 014603 385 I---TVG------LKDWLRITFA--VEPSALEDGLGRMKAFYDRHAKK 421 (422)
Q Consensus 385 ~---~~~------~~~~iRis~~--~~~~~l~~~~~~l~~~~~~~~~~ 421 (422)
. .|+ ...++=+.++ .+++++++++++|+++.++++++
T Consensus 399 ~~l~~~gi~~E~~~~~~i~~~~sig~~~~di~~l~~~L~~~~~~~~~~ 446 (450)
T 3bc8_A 399 HTFRGFMSHADNYPCAYLNAAAAIGMKMQDVDLFIKRLDKCLNIVRKE 446 (450)
T ss_dssp EEEETTTTTSSCCSSCEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCeeecCCCCcEEEEecCCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 1 111 1344544444 78999999999999998877654
No 237
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=76.33 E-value=21 Score=27.26 Aligned_cols=109 Identities=15% Similarity=0.186 Sum_probs=64.5
Q ss_pred CCCCCCEEEecCH--HHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCc
Q 014603 107 KLSPDDVYLTLGC--TQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENT 184 (422)
Q Consensus 107 ~~~~~~i~~~~g~--~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~ 184 (422)
.++...++++-+. ...+..+.+.+.+-|=+++.+. +.....+..|+++..+.-.++++..-+..++.+.+..+.
T Consensus 21 ~lP~~gvliSv~d~dK~~l~~~a~~l~~lGf~i~AT~----GTa~~L~~~Gi~v~~v~k~~egg~~~~~~~i~d~i~~g~ 96 (143)
T 2yvq_A 21 KIPQKGILIGIQQSFRPRFLGVAEQLHNEGFKLFATE----ATSDWLNANNVPATPVAWPSQEGQNPSLSSIRKLIRDGS 96 (143)
T ss_dssp CCCCSEEEEECCGGGHHHHHHHHHHHHTTTCEEEEEH----HHHHHHHHTTCCCEEECCGGGC-----CBCHHHHHHTTS
T ss_pred CCCCCCEEEEecccchHHHHHHHHHHHHCCCEEEECc----hHHHHHHHcCCeEEEEEeccCCCcccccccHHHHHHCCC
Confidence 3333347776555 4555555666766777777766 334455667888776653322210001124556566666
Q ss_pred eEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEc
Q 014603 185 VALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIAD 222 (422)
Q Consensus 185 ~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D 222 (422)
.-+++..|..- .-+..+-..|.+.|-++|++++..
T Consensus 97 i~lVInt~~~~---~~~~~d~~~iRR~Av~~~IP~~T~ 131 (143)
T 2yvq_A 97 IDLVINLPNNN---TKFVHDNYVIRRTAVDSGIPLLTN 131 (143)
T ss_dssp CCEEEECCCCC---GGGHHHHHHHHHHHHHTTCCEECS
T ss_pred ceEEEECCCCC---CcCCccHHHHHHHHHHhCCCeEcC
Confidence 66666666431 223578899999999999998854
No 238
>3gh5_A HEX1, beta-hexosaminidase; beta-N-acetylhexosaminidase, glycosphingolipids, paenibacill GH20, hydrolase, structural genomics, NPPSFA; HET: NAG; 1.60A {Paenibacillus SP} PDB: 3gh4_A* 3gh7_A* 3sur_A* 3sus_A* 3sut_A* 3suu_A* 3suv_A* 3suw_A*
Probab=68.80 E-value=21 Score=34.05 Aligned_cols=111 Identities=20% Similarity=0.275 Sum_probs=62.3
Q ss_pred CCCCCCCEEEecCHHHHHHHHHHHhc---CC---------C-C-----EEEecCCCccc-------------------hH
Q 014603 106 YKLSPDDVYLTLGCTQAIEVILTVLA---RP---------G-A-----NILLPRPGFPY-------------------YE 148 (422)
Q Consensus 106 ~~~~~~~i~~~~g~~~a~~~~~~~l~---~~---------g-d-----~Vl~~~~~~~~-------------------~~ 148 (422)
..++++.|.++.++..++.-.+++|. .. | . ..+...|-|.- +.
T Consensus 126 L~v~~~~i~I~a~~~~G~~~glqTL~QLl~~~~~~~~~~~g~~~~lp~~~I~D~Prf~~RG~mLDvsR~f~~~~~ik~~i 205 (525)
T 3gh5_A 126 LITTSNQVTLTANKPEGVFRGNQTLLQLLPAGIEKNTVVSGVQWVIPHSNISDKPEYEYRGLMLDVARHFFTVDEVKRQI 205 (525)
T ss_dssp EEECSSEEEEEESSHHHHHHHHHHHHHHSCTTTTCSSCCCSCCCEEEEEEEEECCSCSEEEEEEECSSSCCCHHHHHHHH
T ss_pred EEEeCCEEEEEECCHHHHHHHHHHHHHHHhhhccccccccCcceeccceEEeecCCcceeccccCCCCCCCCHHHHHHHH
Confidence 34567788888777666666665542 11 1 1 12445565521 23
Q ss_pred HHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEE
Q 014603 149 ARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVI 220 (422)
Q Consensus 149 ~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li 220 (422)
......+.+....-+.++.+|.+..+.+-++-..+.. .......|..|+.+++++|++.|+++|+-||
T Consensus 206 d~mA~~KlN~lH~HltDdqgwriei~~~P~Lt~~Ga~----~~~~~~~~g~YT~~di~eIv~YA~~rgI~VI 273 (525)
T 3gh5_A 206 DLASQYKINKFHMHLSDDQGWRIEIKSWPDLIEIGSK----GQVGGGPGGYYTQEQFKDIVSYAAERYIEVI 273 (525)
T ss_dssp HHHHTTTCCEEEEECBCSSCBCBCCTTSTHHHHTTTS----CCTTSSCCCCBCHHHHHHHHHHHHTTTCEEE
T ss_pred HHHHHcCCcEEEEEeccCCccccccccchhhhhccCc----cccCCCCCCCcCHHHHHHHHHHHHHcCCEEE
Confidence 3444456666666555544555444333222111100 0011234667999999999999999999888
No 239
>1ofu_X SULA, hypothetical protein PA3008; bacterial cell division inhibitor, SULA protein; HET: GDP; 2.1A {Pseudomonas aeruginosa} SCOP: c.37.1.22
Probab=63.14 E-value=43 Score=24.68 Aligned_cols=104 Identities=12% Similarity=0.012 Sum_probs=60.3
Q ss_pred CEEEecCHHHHHHHHHH---HhcC--CCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceE
Q 014603 112 DVYLTLGCTQAIEVILT---VLAR--PGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVA 186 (422)
Q Consensus 112 ~i~~~~g~~~a~~~~~~---~l~~--~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~ 186 (422)
+++....+...+..++. .+.+ .+.-|+...|.+..+.......|+....+-.....+-.-.+..+|+.++.+...
T Consensus 6 Ell~~~~g~~e~~lLlp~L~~l~~~~~~r~ilwi~pp~~~~~~~L~~~Gl~~~rll~v~~~~~~d~lwa~EqaLrsg~~~ 85 (119)
T 1ofu_X 6 ELSLSGLPGHCLTLLAPILRELSEEQDARWLTLIAPPASLTHEWLRRAGLNRERILLLQAKDNAAALALSCEALRLGRSH 85 (119)
T ss_dssp EEEEESCHHHHHHHHHHHHHHHTTCSSSSEEEEESCCTTSCHHHHHHTTCCTTSEEEECCSSHHHHHHHHHHHHHHTCEE
T ss_pred EEeecCCCccHHHHHHHHHHHhcccccCccEEEECCCCCCCHHHHHHcCCChHHEEEEECCCcHHHHHHHHHHHhcCCcc
Confidence 34454444444444443 3443 445666667777778888888887543222211111112345567788777777
Q ss_pred EEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEE
Q 014603 187 LVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVI 220 (422)
Q Consensus 187 i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li 220 (422)
+++..... ++..+.+++.-.|++.+...+
T Consensus 86 aVl~wl~~-----l~~~~~RRLqlAA~~g~~~~~ 114 (119)
T 1ofu_X 86 TVVSWLEP-----LSRAARKQLSRAAQLGQAQSL 114 (119)
T ss_dssp EEEECCSS-----CCHHHHHHHHHHHHHHTCEEE
T ss_pred EEEECCCc-----CChHHHHHHHHHHHhCCCeEE
Confidence 77776542 556778888888877665543
No 240
>1oft_A SULA, hypothetical protein PA3008; bacterial cell division inhibitor, FTSZ, SULA protein; 2.9A {Pseudomonas aeruginosa} SCOP: c.37.1.22
Probab=62.25 E-value=54 Score=25.60 Aligned_cols=104 Identities=12% Similarity=0.028 Sum_probs=60.4
Q ss_pred CEEEecCHHHHHHHHHHH---hcC--CCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceE
Q 014603 112 DVYLTLGCTQAIEVILTV---LAR--PGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVA 186 (422)
Q Consensus 112 ~i~~~~g~~~a~~~~~~~---l~~--~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~ 186 (422)
+++....+...+..+.-. +.+ .+..|+...|-+..+.......|+....+-.....+-.-.+...|+.++.+...
T Consensus 48 Ell~~~~g~gel~LL~P~La~l~~~~~~r~vlwI~Pp~~l~~~~L~~~Gl~~~rll~v~~~~~~daLwa~EqALrsG~~~ 127 (161)
T 1oft_A 48 ELSLSGLPGHCLTLLAPILRELSEEQDARWLTLIAPPASLTHEWLRRAGLNRERILLLQAKDNAAALALSCEALRLGRSH 127 (161)
T ss_dssp EEEEESCHHHHHHHHHHHHHHHHTCSSSSEEEEESCCTTSCHHHHHHTTCCGGGEEEECCSSTTHHHHHHHHHHHTTCEE
T ss_pred EEccCCCcHHHHHHHHHHHHHhcccccCccEEEECCCCCCCHHHHHHcCCCHHHEEEEECCChHHHHHHHHHHHhcCCcc
Confidence 555554444444433333 332 445566666667777888888887643222211111112345678888887777
Q ss_pred EEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEE
Q 014603 187 LVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVI 220 (422)
Q Consensus 187 i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li 220 (422)
++++.... ++..+.+++--.|++-+...+
T Consensus 128 aVl~Wl~~-----l~~~~~RRLqlAAe~g~~~~f 156 (161)
T 1oft_A 128 TVVSWLEP-----LSRAARKQLSRAAQLGQAQSL 156 (161)
T ss_dssp EEEECCSS-----CCHHHHHHHHHHHHHTTCEEE
T ss_pred EEEECCCc-----CChHHHHHHHHHHHhCCCeEE
Confidence 77777542 556778888887777665543
No 241
>2gjh_A Designed protein; obligate symmetric HOMO-dimer, de novo protein; NMR {}
Probab=59.67 E-value=21 Score=21.13 Aligned_cols=27 Identities=11% Similarity=0.097 Sum_probs=23.3
Q ss_pred eEEEEec-cChHHHHHHHHHHHHHHHHh
Q 014603 392 WLRITFA-VEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 392 ~iRis~~-~~~~~l~~~~~~l~~~~~~~ 418 (422)
.+|||+. .+..+.+++...+.+++.++
T Consensus 3 rvrisitartkkeaekfaailikvfael 30 (62)
T 2gjh_A 3 RVRISITARTKKEAEKFAAILIKVFAEL 30 (62)
T ss_dssp EEEEEEECSSHHHHHHHHHHHHHHHHHT
T ss_pred eEEEEEEecchhHHHHHHHHHHHHHHHh
Confidence 5899998 78889999999999988775
No 242
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=54.15 E-value=62 Score=27.83 Aligned_cols=96 Identities=11% Similarity=0.153 Sum_probs=51.7
Q ss_pred CEEEecCHHHHHH-HHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC-----Cce
Q 014603 112 DVYLTLGCTQAIE-VILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE-----NTV 185 (422)
Q Consensus 112 ~i~~~~g~~~a~~-~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-----~~~ 185 (422)
.+++.+|++.+|- .+...|.+.|-+|++..-.-......++..+.+...+..+- -|.+++++.++. +..
T Consensus 30 KvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~G~i 104 (273)
T 4fgs_A 30 KIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADS-----ANLAELDRLYEKVKAEAGRI 104 (273)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCT-----TCHHHHHHHHHHHHHHHSCE
T ss_pred CEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecC-----CCHHHHHHHHHHHHHHcCCC
Confidence 4544445445554 44556778898887765433334444555566666665543 244555443321 222
Q ss_pred EEEEeCC-CCCccc--ccCHHHHHHHHHHH
Q 014603 186 ALVIINP-GNPCGN--VYTYQHLQKIAETA 212 (422)
Q Consensus 186 ~i~i~~p-~nptG~--~~~~~~l~~i~~~~ 212 (422)
=+++.|. .++.+. -++.++|+++.++-
T Consensus 105 DiLVNNAG~~~~~~~~~~~~e~w~~~~~vN 134 (273)
T 4fgs_A 105 DVLFVNAGGGSMLPLGEVTEEQYDDTFDRN 134 (273)
T ss_dssp EEEEECCCCCCCCCTTSCCHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhccHHHHHHHHHHH
Confidence 2344544 333332 35778888887754
No 243
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=52.90 E-value=97 Score=25.96 Aligned_cols=99 Identities=13% Similarity=0.136 Sum_probs=57.5
Q ss_pred CEEEecCHHHHHHHHHHHhcCCCCEEEec---CC------Cc-----cchHHHHhhCCCeEEEeeccCCCCcccCHHHHH
Q 014603 112 DVYLTLGCTQAIEVILTVLARPGANILLP---RP------GF-----PYYEARATHSHLEVRHFDLLPAKGWEVDLDAVE 177 (422)
Q Consensus 112 ~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~---~~------~~-----~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~ 177 (422)
-+++.+||..+..++..+. +.|-.|... .+ .| ......++..|++...+++.... .-..+.+.
T Consensus 7 vvvl~SGGkDSs~al~~l~-~~G~eV~~L~~~~~~~~~s~~~h~~~~e~a~~~A~~LGIpl~~v~~~g~~--~~e~e~l~ 83 (237)
T 3rjz_A 7 VAVLYSGGKDSNYALYWAI-KNRFSVKFLVTMVSENEESYMYHTINANLTDLQARALGIPLVKGFTQGEK--EKEVEDLK 83 (237)
T ss_dssp EEEECCSSHHHHHHHHHHH-HTTCEEEEEEEEECC--------CCSSSHHHHHHHHHTCCEEEEEC--------CHHHHH
T ss_pred EEEEecCcHHHHHHHHHHH-HcCCeEEEEEEEcCCCCCccccCCccHHHHHHHHHHcCCCEEEEECCCCc--hHHHHHHH
Confidence 4677888888887777655 445544321 11 11 12356777889888777764321 12356666
Q ss_pred HhhcC-CceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEE
Q 014603 178 ALADE-NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVI 220 (422)
Q Consensus 178 ~~~~~-~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li 220 (422)
+.++. +..+++ +|.+.+......+-+.|.+.|+..+
T Consensus 84 ~~l~~~~i~~vv-------~Gdi~s~yqr~r~e~vc~~~gl~~~ 120 (237)
T 3rjz_A 84 RVLSGLKIQGIV-------AGALASKYQRKRIEKVAKELGLEVY 120 (237)
T ss_dssp HHHTTSCCSEEE-------CC---CCSHHHHHHHHHHHTTCEEE
T ss_pred HHHHhcCCcEEE-------ECCcchHHHHHHHHHHHHHcCCEEE
Confidence 66654 344554 6777666677788888989888766
No 244
>2gjx_A Beta-hexosaminidase alpha chain; beta-hexosaminidase A, glycosidase, TAY-sachs disease, GM2 ganglisode, TIM barrel, hydrolase; HET: NAG BMA NDG; 2.80A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 2gk1_A*
Probab=52.14 E-value=39 Score=32.15 Aligned_cols=26 Identities=35% Similarity=0.595 Sum_probs=23.2
Q ss_pred CcccccCHHHHHHHHHHHHHcCcEEE
Q 014603 195 PCGNVYTYQHLQKIAETAKKLGIMVI 220 (422)
Q Consensus 195 ptG~~~~~~~l~~i~~~~~~~~~~li 220 (422)
|.+..|+.+++++|++.|+++|+-||
T Consensus 207 ~~~~~YT~~di~eiv~yA~~rgI~VI 232 (507)
T 2gjx_A 207 PVTHIYTAQDVKEVIEYARLRGIRVL 232 (507)
T ss_dssp TTTSCBCHHHHHHHHHHHHHTTCEEE
T ss_pred CCCCCcCHHHHHHHHHHHHHcCCEEE
Confidence 34667999999999999999999988
No 245
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=49.73 E-value=85 Score=26.15 Aligned_cols=96 Identities=21% Similarity=0.105 Sum_probs=48.2
Q ss_pred CCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC------Cc
Q 014603 111 DDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE------NT 184 (422)
Q Consensus 111 ~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~ 184 (422)
+.+++|.++...=..+.+.|.+.|.+|++..-.-..........+.++..+..+- -|.+.+++.++. +.
T Consensus 7 k~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~i 81 (247)
T 3rwb_A 7 KTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADI-----SDPGSVKALFAEIQALTGGI 81 (247)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCT-----TCHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCC-----CCHHHHHHHHHHHHHHCCCC
Confidence 3455555444333444566777888887765443333334444455566555432 245555544321 34
Q ss_pred eEEEEeCCCCCccc--ccCHHHHHHHHHH
Q 014603 185 VALVIINPGNPCGN--VYTYQHLQKIAET 211 (422)
Q Consensus 185 ~~i~i~~p~nptG~--~~~~~~l~~i~~~ 211 (422)
..++-+....+.+. -.+.++++++.++
T Consensus 82 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 110 (247)
T 3rwb_A 82 DILVNNASIVPFVAWDDVDLDHWRKIIDV 110 (247)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 44443333333332 3466777766553
No 246
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=48.50 E-value=98 Score=26.38 Aligned_cols=96 Identities=13% Similarity=0.035 Sum_probs=48.0
Q ss_pred CCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC------Cc
Q 014603 111 DDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE------NT 184 (422)
Q Consensus 111 ~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~ 184 (422)
..+++|.++...=..+...|.+.|.+|++..-.-..........+.++..+..+- -|.+.+++.++. +.
T Consensus 28 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g~i 102 (277)
T 4dqx_A 28 RVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDV-----SSAKDAESMVEKTTAKWGRV 102 (277)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCT-----TCHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecC-----CCHHHHHHHHHHHHHHcCCC
Confidence 3455554444333444556777888887765433333333444455565555432 245555544321 34
Q ss_pred eEEEEeCCCCCccc--ccCHHHHHHHHHH
Q 014603 185 VALVIINPGNPCGN--VYTYQHLQKIAET 211 (422)
Q Consensus 185 ~~i~i~~p~nptG~--~~~~~~l~~i~~~ 211 (422)
..++.+....+.+. ..+.++++++.++
T Consensus 103 D~lv~nAg~~~~~~~~~~~~~~~~~~~~v 131 (277)
T 4dqx_A 103 DVLVNNAGFGTTGNVVTIPEETWDRIMSV 131 (277)
T ss_dssp CEEEECCCCCCCBCTTTSCHHHHHHHHHH
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHH
Confidence 44443333332232 3566777766553
No 247
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=44.67 E-value=1.1e+02 Score=25.61 Aligned_cols=96 Identities=16% Similarity=0.033 Sum_probs=40.2
Q ss_pred CCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC------Cc
Q 014603 111 DDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE------NT 184 (422)
Q Consensus 111 ~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~ 184 (422)
..+++|.++...=..+...|.+.|.+|++..-.-..........+.++..+..+- -|.+.+++.++. +.
T Consensus 8 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~i 82 (257)
T 3tpc_A 8 RVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADV-----TNEADATAALAFAKQEFGHV 82 (257)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCT-----TCHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccC-----CCHHHHHHHHHHHHHHcCCC
Confidence 3445554444333444556777888877654333222333333344455554432 244555544321 34
Q ss_pred eEEEEeCCCCCccc------ccCHHHHHHHHHH
Q 014603 185 VALVIINPGNPCGN------VYTYQHLQKIAET 211 (422)
Q Consensus 185 ~~i~i~~p~nptG~------~~~~~~l~~i~~~ 211 (422)
..++-+-...+.+. ..+.+++++..++
T Consensus 83 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~v 115 (257)
T 3tpc_A 83 HGLVNCAGTAPGEKILGRSGPHALDSFARTVAV 115 (257)
T ss_dssp CEEEECCCCCCCCCSEETTEECCHHHHHHHHHH
T ss_pred CEEEECCCCCCCCccccccccCCHHHHHHHHHH
Confidence 44443322222221 2455777766553
No 248
>3lkv_A Uncharacterized conserved domain protein; ATPase binding cassette, PSI, MCSG, structural genomics, Pro structure initiative; HET: PHE; 2.20A {Vibrio cholerae}
Probab=44.67 E-value=1.5e+02 Score=25.49 Aligned_cols=147 Identities=12% Similarity=0.169 Sum_probs=68.2
Q ss_pred cHHHHHHHHHHhhCCCC-------CCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecCHHHHHHHHHHHhcCCCCE
Q 014603 64 ASVAVDAIVHSVRSARF-------NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGAN 136 (422)
Q Consensus 64 ~~~v~~a~~~~~~~~~~-------~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~ 136 (422)
.+.+++.+.+.+..... ..|....+.......+++.|.. -++ +++++.++.. ...+..... .-..
T Consensus 22 ld~~~~G~~~~L~~~G~~~g~nv~~~~~~a~gd~~~~~~~~~~l~~-----~~~-DlIiai~t~a-a~a~~~~~~-~iPV 93 (302)
T 3lkv_A 22 LDATRQGLLDGLKAKGYEEGKNLEFDYKTAQGNPAIAVQIARQFVG-----ENP-DVLVGIATPT-AQALVSATK-TIPI 93 (302)
T ss_dssp HHHHHHHHHHHHHHTTCCBTTTEEEEEEECTTCHHHHHHHHHHHHT-----TCC-SEEEEESHHH-HHHHHHHCS-SSCE
T ss_pred HHHHHHHHHHHHHhhCcccCCcEEEEEEeCCCCHHHHHHHHHHHHh-----cCC-cEEEEcCCHH-HHHHHhhcC-CCCe
Confidence 35556666666654211 1233445666777677766643 133 4666666544 344444322 1123
Q ss_pred EEe--cCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHH
Q 014603 137 ILL--PRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKK 214 (422)
Q Consensus 137 Vl~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~ 214 (422)
|.+ .+|.-.........-|..+.-+. ......-.++.+.+.+....++.++.+++.+... ...+.+.+.+++
T Consensus 94 Vf~~v~dp~~~~l~~~~~~~g~nvtGv~--~~~~~~~~l~l~~~l~P~~k~vgvi~~~~~~~s~----~~~~~~~~~~~~ 167 (302)
T 3lkv_A 94 VFTAVTDPVGAKLVKQLEQPGKNVTGLS--DLSPVEQHVELIKEILPNVKSIGVVYNPGEANAV----SLMELLKLSAAK 167 (302)
T ss_dssp EEEEESCTTTTTSCSCSSSCCSSEEEEE--CCCCHHHHHHHHHHHSTTCCEEEEEECTTCHHHH----HHHHHHHHHHHH
T ss_pred EEEecCCcchhhhcccccCCCCcEEEEE--CCcCHHHHHHHHHHhCCCCCEEEEEeCCCcccHH----HHHHHHHHHHHH
Confidence 332 23333222221122233333322 1111112233344444334455566666543322 356677778889
Q ss_pred cCcEEEEccc
Q 014603 215 LGIMVIADEV 224 (422)
Q Consensus 215 ~~~~li~D~~ 224 (422)
+|+-++.-..
T Consensus 168 ~g~~~v~~~~ 177 (302)
T 3lkv_A 168 HGIKLVEATA 177 (302)
T ss_dssp TTCEEEEEEC
T ss_pred cCCEEEEEec
Confidence 9988775443
No 249
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=44.62 E-value=61 Score=27.88 Aligned_cols=67 Identities=27% Similarity=0.173 Sum_probs=36.5
Q ss_pred CCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC
Q 014603 111 DDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE 182 (422)
Q Consensus 111 ~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~ 182 (422)
..+++|.++...=..+.+.|.+.|.+|++..-.-..........+.++..+..+- -|.+.+++.++.
T Consensus 17 k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl-----~d~~~v~~~~~~ 83 (291)
T 3rd5_A 17 RTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDL-----QDLSSVRRFADG 83 (291)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCT-----TCHHHHHHHHHT
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCC-----CCHHHHHHHHHh
Confidence 3455555544333445556777888877764333333344444455666665533 256666665543
No 250
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A*
Probab=43.94 E-value=46 Score=28.91 Aligned_cols=22 Identities=5% Similarity=0.149 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHcCcEEEEcc
Q 014603 202 YQHLQKIAETAKKLGIMVIADE 223 (422)
Q Consensus 202 ~~~l~~i~~~~~~~~~~li~D~ 223 (422)
.+.++++++.|.++|+.+|+|-
T Consensus 64 ~~~ld~~v~~a~~~Gi~Vild~ 85 (302)
T 1bqc_A 64 PSDVANVISLCKQNRLICMLEV 85 (302)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEe
Confidence 4789999999999999999984
No 251
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=43.32 E-value=39 Score=29.37 Aligned_cols=50 Identities=12% Similarity=0.144 Sum_probs=34.8
Q ss_pred CHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccc
Q 014603 172 DLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDH 227 (422)
Q Consensus 172 d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~ 227 (422)
-.+.+++.++.+.+.+++... |. +.++.+++.+.|+++|+.++-..+.+.
T Consensus 77 ~~~~~~ea~~~Gi~~iVi~t~----G~--~~~~~~~l~~~A~~~gv~liGPNc~Gi 126 (288)
T 2nu8_A 77 CKDSILEAIDAGIKLIITITE----GI--PTLDMLTVKVKLDEAGVRMIGPNTPGV 126 (288)
T ss_dssp HHHHHHHHHHTTCSEEEECCC----CC--CHHHHHHHHHHHHHHTCEEECSSCCEE
T ss_pred HHHHHHHHHHCCCCEEEEECC----CC--CHHHHHHHHHHHHHcCCEEEecCCcce
Confidence 456677777777776554332 33 447788999999999998886665443
No 252
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=43.08 E-value=86 Score=25.30 Aligned_cols=43 Identities=9% Similarity=0.160 Sum_probs=18.2
Q ss_pred cCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeec
Q 014603 117 LGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDL 163 (422)
Q Consensus 117 ~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~ 163 (422)
.+-.+++..+-.. ..|..|++....-..+.. +..+.+++.+++
T Consensus 36 ~~l~~~v~~a~~~--~~~~dVIISRGgta~~lr--~~~~iPVV~I~~ 78 (196)
T 2q5c_A 36 ASLTRASKIAFGL--QDEVDAIISRGATSDYIK--KSVSIPSISIKV 78 (196)
T ss_dssp CCHHHHHHHHHHH--TTTCSEEEEEHHHHHHHH--TTCSSCEEEECC
T ss_pred CCHHHHHHHHHHh--cCCCeEEEECChHHHHHH--HhCCCCEEEEcC
Confidence 3344455444333 445445555532222111 223455555543
No 253
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=42.70 E-value=1.2e+02 Score=25.28 Aligned_cols=95 Identities=12% Similarity=0.012 Sum_probs=46.4
Q ss_pred CCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC------Cc
Q 014603 111 DDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE------NT 184 (422)
Q Consensus 111 ~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~ 184 (422)
..+++|.++...=..+.+.|.+.|.+|++..-.-..........+..+..+..+- -|.+.+++.++. +.
T Consensus 9 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~g~i 83 (259)
T 4e6p_A 9 KSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDV-----TRQDSIDAAIAATVEHAGGL 83 (259)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCT-----TCHHHHHHHHHHHHHHSSSC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeC-----CCHHHHHHHHHHHHHHcCCC
Confidence 3455555544433445566777888887765433333333344444555555432 245555544321 34
Q ss_pred eEEEEeCCCCCcc--cccCHHHHHHHHH
Q 014603 185 VALVIINPGNPCG--NVYTYQHLQKIAE 210 (422)
Q Consensus 185 ~~i~i~~p~nptG--~~~~~~~l~~i~~ 210 (422)
..++-+....+.+ .-.+.+++++..+
T Consensus 84 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 111 (259)
T 4e6p_A 84 DILVNNAALFDLAPIVEITRESYEKLFA 111 (259)
T ss_dssp CEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 4444333332222 2345677765544
No 254
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=42.04 E-value=1.1e+02 Score=25.88 Aligned_cols=93 Identities=15% Similarity=0.149 Sum_probs=45.3
Q ss_pred EEEecCHHHHHH-HHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC------Cce
Q 014603 113 VYLTLGCTQAIE-VILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE------NTV 185 (422)
Q Consensus 113 i~~~~g~~~a~~-~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~ 185 (422)
+++.+|++..+- .+...|.+.|.+|++..-.-..........+..+..+..+- -|.+.+++.++. +..
T Consensus 7 ~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~~~~~~~~~~~~~g~id 81 (281)
T 3m1a_A 7 VWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDV-----TDGERIDVVAADVLARYGRVD 81 (281)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCT-----TCHHHHHHHHHHHHHHHSCCS
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeC-----CCHHHHHHHHHHHHHhCCCCC
Confidence 444444444443 44556777888887765444444444444454555555432 244555544321 344
Q ss_pred EEEEeCCCCCccc--ccCHHHHHHHHH
Q 014603 186 ALVIINPGNPCGN--VYTYQHLQKIAE 210 (422)
Q Consensus 186 ~i~i~~p~nptG~--~~~~~~l~~i~~ 210 (422)
.++.+....+.+. ..+.++++++.+
T Consensus 82 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 108 (281)
T 3m1a_A 82 VLVNNAGRTQVGAFEETTERELRDLFE 108 (281)
T ss_dssp EEEECCCCEEECCTTTCCHHHHHHHHH
T ss_pred EEEECCCcCCCCChhhCCHHHHHHHHH
Confidence 4443332222221 345566665544
No 255
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=40.96 E-value=76 Score=27.58 Aligned_cols=50 Identities=18% Similarity=0.179 Sum_probs=34.7
Q ss_pred CHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccc
Q 014603 172 DLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDH 227 (422)
Q Consensus 172 d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~ 227 (422)
-.+.+++.++.+.+.+++.. +|. +.++.+++.+.|+++++.++-..+.+.
T Consensus 83 ~~~~v~ea~~~Gi~~vVi~t----~G~--~~~~~~~l~~~A~~~gi~viGPNc~Gi 132 (294)
T 2yv1_A 83 AKDAVFEAIDAGIELIVVIT----EHI--PVHDTMEFVNYAEDVGVKIIGPNTPGI 132 (294)
T ss_dssp HHHHHHHHHHTTCSEEEECC----SCC--CHHHHHHHHHHHHHHTCEEECSSCCEE
T ss_pred HHHHHHHHHHCCCCEEEEEC----CCC--CHHHHHHHHHHHHHcCCEEEcCCCcee
Confidence 34566777777777655433 232 446788999999999998887776544
No 256
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=40.27 E-value=1.2e+02 Score=25.67 Aligned_cols=95 Identities=17% Similarity=0.016 Sum_probs=45.4
Q ss_pred CCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC------Cc
Q 014603 111 DDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE------NT 184 (422)
Q Consensus 111 ~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~ 184 (422)
..+++|.++...=..+.+.|.+.|..|++..-.-..........+.++..+..+- -|.+.+++.++. +.
T Consensus 28 k~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g~i 102 (266)
T 3grp_A 28 RKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANL-----SDRKSIKQLAEVAEREMEGI 102 (266)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCT-----TSHHHHHHHHHHHHHHHTSC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeec-----CCHHHHHHHHHHHHHHcCCC
Confidence 3455554444333444556777888887765433333344444565666665543 245555544321 34
Q ss_pred eEEEEeCCCCCccc--ccCHHHHHHHHH
Q 014603 185 VALVIINPGNPCGN--VYTYQHLQKIAE 210 (422)
Q Consensus 185 ~~i~i~~p~nptG~--~~~~~~l~~i~~ 210 (422)
..++-+......+. ..+.+++++..+
T Consensus 103 D~lvnnAg~~~~~~~~~~~~~~~~~~~~ 130 (266)
T 3grp_A 103 DILVNNAGITRDGLFVRMQDQDWDDVLA 130 (266)
T ss_dssp CEEEECCCCC-----CCCHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 44443322222221 244566665544
No 257
>1now_A Beta-hexosaminidase beta chain; (beta/alpha)8-barrel, homodimer, family 20 glycosidase, HYDR; HET: NAG IFG; 2.20A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 1nou_A* 1np0_A* 2gjx_B* 3lmy_A* 1o7a_A* 2gk1_B*
Probab=40.18 E-value=1.8e+02 Score=27.59 Aligned_cols=24 Identities=33% Similarity=0.488 Sum_probs=22.3
Q ss_pred ccccCHHHHHHHHHHHHHcCcEEE
Q 014603 197 GNVYTYQHLQKIAETAKKLGIMVI 220 (422)
Q Consensus 197 G~~~~~~~l~~i~~~~~~~~~~li 220 (422)
|..|+.+++++|++.|+++|+-||
T Consensus 214 ~~~YT~~di~eiv~yA~~rgI~VI 237 (507)
T 1now_A 214 SHVYTPNDVRMVIEYARLRGIRVL 237 (507)
T ss_dssp TSCBCHHHHHHHHHHHHHTTCEEE
T ss_pred CCCCCHHHHHHHHHHHHHcCCEEE
Confidence 667999999999999999999988
No 258
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=39.86 E-value=1e+02 Score=26.27 Aligned_cols=95 Identities=17% Similarity=0.099 Sum_probs=46.3
Q ss_pred CEEEecCHHHHHH-HHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC------Cc
Q 014603 112 DVYLTLGCTQAIE-VILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE------NT 184 (422)
Q Consensus 112 ~i~~~~g~~~a~~-~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~ 184 (422)
.+++.+|++..+- .+...|.+.|.+|++..-.-..........+.++..+..+- -|.+.+++.++. +.
T Consensus 30 k~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g~i 104 (277)
T 3gvc_A 30 KVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDV-----SDEQQIIAMVDACVAAFGGV 104 (277)
T ss_dssp CEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCT-----TCHHHHHHHHHHHHHHHSSC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecC-----CCHHHHHHHHHHHHHHcCCC
Confidence 3444444444444 34556777888887765433333333344455555555432 244555443321 34
Q ss_pred eEEEEeCCCCCccc--ccCHHHHHHHHHH
Q 014603 185 VALVIINPGNPCGN--VYTYQHLQKIAET 211 (422)
Q Consensus 185 ~~i~i~~p~nptG~--~~~~~~l~~i~~~ 211 (422)
..++-+....+.+. -.+.++++++.++
T Consensus 105 D~lvnnAg~~~~~~~~~~~~~~~~~~~~v 133 (277)
T 3gvc_A 105 DKLVANAGVVHLASLIDTTVEDFDRVIAI 133 (277)
T ss_dssp CEEEECCCCCCCBCTTTCCHHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 44443332222222 3466777766553
No 259
>1jak_A Beta-N-acetylhexosaminidase; glycoside hydrolase, family 20, substrate-assisted catalysis, alpha/beta barrel, isofagomin inhibitor complex; HET: IFG; 1.75A {Streptomyces plicatus} SCOP: c.1.8.6 d.92.2.1 PDB: 1hp4_A* 1hp5_A* 1m01_A* 1m04_A* 1m03_A*
Probab=39.50 E-value=48 Score=31.56 Aligned_cols=24 Identities=25% Similarity=0.354 Sum_probs=22.5
Q ss_pred ccccCHHHHHHHHHHHHHcCcEEE
Q 014603 197 GNVYTYQHLQKIAETAKKLGIMVI 220 (422)
Q Consensus 197 G~~~~~~~l~~i~~~~~~~~~~li 220 (422)
|-.++.+++++|++.|+++|+-||
T Consensus 225 ~g~YT~~di~eiv~yA~~rgI~VI 248 (512)
T 1jak_A 225 GGYYTKAEYKEIVRYAASRHLEVV 248 (512)
T ss_dssp CCCBCHHHHHHHHHHHHHTTCEEE
T ss_pred CCCCCHHHHHHHHHHHHHcCCEEE
Confidence 678999999999999999999988
No 260
>3e2i_A Thymidine kinase; Zn-binding, ATP-binding, DNA synthesis, nucleotide-B transferase; HET: MSE; 2.01A {Staphylococcus aureus}
Probab=39.44 E-value=60 Score=26.83 Aligned_cols=95 Identities=9% Similarity=0.055 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHhcCCCCEEEecCCCccc---hHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCC
Q 014603 119 CTQAIEVILTVLARPGANILLPRPGFPY---YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNP 195 (422)
Q Consensus 119 ~~~a~~~~~~~l~~~gd~Vl~~~~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~np 195 (422)
+|+++..+.+. ...|.+|++..|.-.. -...+...|.....+++.. .+++.+.+..+...+++-..++
T Consensus 42 TT~Llr~~~r~-~~~g~kvli~kp~~D~R~~~~~I~Sr~G~~~~a~~v~~-------~~di~~~i~~~~dvV~IDEaQF- 112 (219)
T 3e2i_A 42 SEELIRRLRRG-IYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAINISK-------ASEIMTHDLTNVDVIGIDEVQF- 112 (219)
T ss_dssp HHHHHHHHHHH-HHTTCCEEEEEEC-----------CBTTBCCEEEEESS-------GGGGGGSCCTTCSEEEECCGGG-
T ss_pred HHHHHHHHHHH-HHcCCceEEEEeccCCcchhhhHHHhcCCceeeEEeCC-------HHHHHHHHhcCCCEEEEechhc-
Confidence 45566665444 3456777877665532 2344555666655555432 2333333444566677766666
Q ss_pred cccccCHHHHHHHHHHHHHcCcEEEEcccccc
Q 014603 196 CGNVYTYQHLQKIAETAKKLGIMVIADEVYDH 227 (422)
Q Consensus 196 tG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~ 227 (422)
++.+.++.+.+++ +.|+.||+=.--..
T Consensus 113 ----f~~~~v~~l~~la-~~gi~Vi~~GLd~D 139 (219)
T 3e2i_A 113 ----FDDEIVSIVEKLS-ADGHRVIVAGLDMD 139 (219)
T ss_dssp ----SCTHHHHHHHHHH-HTTCEEEEEEESBC
T ss_pred ----CCHHHHHHHHHHH-HCCCEEEEeecccc
Confidence 4445677777777 57999997555444
No 261
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=38.23 E-value=1.5e+02 Score=24.73 Aligned_cols=95 Identities=14% Similarity=0.035 Sum_probs=47.2
Q ss_pred CCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC------Cc
Q 014603 111 DDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE------NT 184 (422)
Q Consensus 111 ~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~ 184 (422)
+.+++|.++...=..+.+.|.+.|.+|++..-.-.......+..+.++..+..+- -|.+.+++.++. +.
T Consensus 9 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~i 83 (255)
T 4eso_A 9 KKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDI-----ADLNEIAVLGAAAGQTLGAI 83 (255)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCT-----TCHHHHHHHHHHHHHHHSSE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccC-----CCHHHHHHHHHHHHHHhCCC
Confidence 3455555544443445566777888887765433333333333455566555433 244555443321 33
Q ss_pred eEEEEeCC-CCCccc--ccCHHHHHHHHHH
Q 014603 185 VALVIINP-GNPCGN--VYTYQHLQKIAET 211 (422)
Q Consensus 185 ~~i~i~~p-~nptG~--~~~~~~l~~i~~~ 211 (422)
..+ +.+. ..+.+. -.+.+++++..++
T Consensus 84 d~l-v~nAg~~~~~~~~~~~~~~~~~~~~~ 112 (255)
T 4eso_A 84 DLL-HINAGVSELEPFDQVSEASYDRQFAV 112 (255)
T ss_dssp EEE-EECCCCCCCBCGGGCCHHHHHHHHHH
T ss_pred CEE-EECCCCCCCCChhhCCHHHHHHHHHH
Confidence 434 4433 222222 2466777776653
No 262
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=37.73 E-value=1.3e+02 Score=25.53 Aligned_cols=53 Identities=11% Similarity=0.004 Sum_probs=28.4
Q ss_pred CEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeecc
Q 014603 112 DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLL 164 (422)
Q Consensus 112 ~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~ 164 (422)
.+++|.++...=..+...|.+.|.+|++..-.-..........+..+..+..+
T Consensus 32 ~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~D 84 (281)
T 3ppi_A 32 SAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTN 84 (281)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECC
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcC
Confidence 45555544433344455677788888776543333333444445556666554
No 263
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=37.55 E-value=1.8e+02 Score=24.46 Aligned_cols=94 Identities=19% Similarity=0.158 Sum_probs=49.1
Q ss_pred CEEEecCHHHHHHH-HHHHhcCCCCEEEecCCCccchH---HHHhhCCCeEEEeeccCCCCcccCHHHHHHhh----cC-
Q 014603 112 DVYLTLGCTQAIEV-ILTVLARPGANILLPRPGFPYYE---ARATHSHLEVRHFDLLPAKGWEVDLDAVEALA----DE- 182 (422)
Q Consensus 112 ~i~~~~g~~~a~~~-~~~~l~~~gd~Vl~~~~~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~----~~- 182 (422)
.+++.+|++.+|-. +...|.+.|-+|++..-.-.... ......|.++..+..+-. |.+++++.+ ++
T Consensus 10 KvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~-----~~~~v~~~~~~~~~~~ 84 (255)
T 4g81_D 10 KTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVT-----DELAIEAAFSKLDAEG 84 (255)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTT-----CHHHHHHHHHHHHHTT
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCC-----CHHHHHHHHHHHHHHC
Confidence 45444455555544 45567788988888654332222 222334666666655432 445554433 22
Q ss_pred -CceEEEEeCC-CCCccc--ccCHHHHHHHHHH
Q 014603 183 -NTVALVIINP-GNPCGN--VYTYQHLQKIAET 211 (422)
Q Consensus 183 -~~~~i~i~~p-~nptG~--~~~~~~l~~i~~~ 211 (422)
+.. +++.|. ..+.+. -++.++|+++.++
T Consensus 85 G~iD-iLVNNAG~~~~~~~~~~~~e~~~~~~~v 116 (255)
T 4g81_D 85 IHVD-ILINNAGIQYRKPMVELELENWQKVIDT 116 (255)
T ss_dssp CCCC-EEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCCc-EEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 233 344544 333332 3577888887764
No 264
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=37.12 E-value=78 Score=28.14 Aligned_cols=76 Identities=14% Similarity=0.138 Sum_probs=43.7
Q ss_pred CCccchHHHHhhC-CCeEEEeeccCCCCcccCHHHHHHhhc-CCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEE
Q 014603 142 PGFPYYEARATHS-HLEVRHFDLLPAKGWEVDLDAVEALAD-ENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMV 219 (422)
Q Consensus 142 ~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~l 219 (422)
|+|.......... ..++..+-+.+. .-.+.+.+.+. .+.+.+++..... +.++.+++.++|+++|+.|
T Consensus 65 pvy~sv~ea~~~~p~~DlaVi~vp~~----~a~~ai~ea~~~~Gv~~vViiT~G~------~e~~~~~l~~~a~~~g~rl 134 (334)
T 3mwd_B 65 PVFKNMADAMRKHPEVDVLINFASLR----SAYDSTMETMNYAQIRTIAIIAEGI------PEALTRKLIKKADQKGVTI 134 (334)
T ss_dssp EEESSHHHHHHHCTTCCEEEECCCTT----THHHHHHHHTTSTTCCEEEECCSCC------CHHHHHHHHHHHHHHTCEE
T ss_pred eeeCCHHHHhhcCCCCcEEEEecCHH----HHHHHHHHHHHHCCCCEEEEECCCC------CHHHHHHHHHHHHHcCCEE
Confidence 5555555554433 344443332221 12355555565 6777776644332 2367889999999999998
Q ss_pred EEcccccc
Q 014603 220 IADEVYDH 227 (422)
Q Consensus 220 i~D~~~~~ 227 (422)
|==.+.+.
T Consensus 135 iGPNc~Gi 142 (334)
T 3mwd_B 135 IGPATVGG 142 (334)
T ss_dssp ECSSCCCE
T ss_pred EccCCccc
Confidence 85555543
No 265
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=36.79 E-value=23 Score=33.30 Aligned_cols=33 Identities=18% Similarity=0.500 Sum_probs=27.9
Q ss_pred CCcccccCHHHHHHHHHHHHHcCcEEEEcccccccc
Q 014603 194 NPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLA 229 (422)
Q Consensus 194 nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~ 229 (422)
.-.|+. ++++++++.|+++|+.||+|-++-...
T Consensus 71 ~~~Gt~---~df~~lv~~aH~~Gi~VilD~V~NH~~ 103 (496)
T 4gqr_A 71 TRSGNE---DEFRNMVTRCNNVGVRIYVDAVINHMC 103 (496)
T ss_dssp BTTBCH---HHHHHHHHHHHHTTCEEEEEECCSEEE
T ss_pred CCCCCH---HHHHHHHHHHHHCCCEEEEEEccCcCC
Confidence 345665 999999999999999999999987643
No 266
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=36.62 E-value=1.9e+02 Score=24.31 Aligned_cols=95 Identities=18% Similarity=0.020 Sum_probs=46.3
Q ss_pred CCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC------Cc
Q 014603 111 DDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE------NT 184 (422)
Q Consensus 111 ~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~ 184 (422)
..+++|.++...=..+.+.|.+.|.+|++..-.-..........+.++..+..+- -|.+.+++.++. +.
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~i 86 (271)
T 3tzq_B 12 KVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDL-----TNEVSVRALIDFTIDTFGRL 86 (271)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCT-----TCHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCC-----CCHHHHHHHHHHHHHHcCCC
Confidence 3455555444333445566777888877765444334444444455555555432 244555544331 34
Q ss_pred eEEEEeCCCC-C-cc--cccCHHHHHHHHH
Q 014603 185 VALVIINPGN-P-CG--NVYTYQHLQKIAE 210 (422)
Q Consensus 185 ~~i~i~~p~n-p-tG--~~~~~~~l~~i~~ 210 (422)
..++-+.... + .+ .-++.+++++..+
T Consensus 87 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~ 116 (271)
T 3tzq_B 87 DIVDNNAAHSDPADMLVTQMTVDVWDDTFT 116 (271)
T ss_dssp CEEEECCCCCCTTCCCGGGCCHHHHHHHHH
T ss_pred CEEEECCCCCCCCCCccccCCHHHHHHHHH
Confidence 4444332222 2 11 1346677766655
No 267
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=36.61 E-value=1.5e+02 Score=24.57 Aligned_cols=95 Identities=15% Similarity=0.011 Sum_probs=44.1
Q ss_pred CCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC------Cc
Q 014603 111 DDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE------NT 184 (422)
Q Consensus 111 ~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~ 184 (422)
..+++|.++...=..+.+.|.+.|.+|++..-.-..........+.....+..+- -|.+.+++.++. +.
T Consensus 10 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g~i 84 (248)
T 3op4_A 10 KVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNV-----TNPESIEAVLKAITDEFGGV 84 (248)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCT-----TCHHHHHHHHHHHHHHHCCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeC-----CCHHHHHHHHHHHHHHcCCC
Confidence 3455554444333344556777888887764333322333333333344444332 245555544321 34
Q ss_pred eEEEEeCCCCCcc--cccCHHHHHHHHH
Q 014603 185 VALVIINPGNPCG--NVYTYQHLQKIAE 210 (422)
Q Consensus 185 ~~i~i~~p~nptG--~~~~~~~l~~i~~ 210 (422)
..++-+-...+.+ ...+.+++++..+
T Consensus 85 D~lv~nAg~~~~~~~~~~~~~~~~~~~~ 112 (248)
T 3op4_A 85 DILVNNAGITRDNLLMRMKEEEWSDIME 112 (248)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 4444332222222 2346677776655
No 268
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=36.07 E-value=1.9e+02 Score=24.04 Aligned_cols=95 Identities=13% Similarity=-0.023 Sum_probs=45.9
Q ss_pred CCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC------Cc
Q 014603 111 DDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE------NT 184 (422)
Q Consensus 111 ~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~ 184 (422)
..+++|.++...=..+.+.|.+.|.+|++..-.-..........+..+..+..+-. |.+.+++.++. +.
T Consensus 10 k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~~g~i 84 (261)
T 3n74_A 10 KVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADIS-----KEADVDAAVEAALSKFGKV 84 (261)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTT-----SHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCC-----CHHHHHHHHHHHHHhcCCC
Confidence 34555554443334455567778888777654333333344444555655554432 44554443321 34
Q ss_pred eEEEEeCCC-CCcc--cccCHHHHHHHHH
Q 014603 185 VALVIINPG-NPCG--NVYTYQHLQKIAE 210 (422)
Q Consensus 185 ~~i~i~~p~-nptG--~~~~~~~l~~i~~ 210 (422)
..++.+... .+.+ ...+.+++++..+
T Consensus 85 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 113 (261)
T 3n74_A 85 DILVNNAGIGHKPQNAELVEPEEFDRIVG 113 (261)
T ss_dssp CEEEECCCCCCCSCCGGGSCHHHHHHHHH
T ss_pred CEEEECCccCCCCCCcccCCHHHHHHHHH
Confidence 444433322 2122 1246677766554
No 269
>1qys_A TOP7; alpha-beta, novel fold, de novo protein; 2.50A {Computationally designed sequence} SCOP: k.41.1.1
Probab=35.64 E-value=66 Score=21.16 Aligned_cols=28 Identities=11% Similarity=0.100 Sum_probs=23.9
Q ss_pred CeEEEEec-cChHHHHHHHHHHHHHHHHh
Q 014603 391 DWLRITFA-VEPSALEDGLGRMKAFYDRH 418 (422)
Q Consensus 391 ~~iRis~~-~~~~~l~~~~~~l~~~~~~~ 418 (422)
..+|||+. .+..+.+++...+.+++.++
T Consensus 46 krvrisitartkkeaekfaailikvfael 74 (106)
T 1qys_A 46 KRVRISITARTKKEAEKFAAILIKVFAEL 74 (106)
T ss_dssp SEEEEEEECSSHHHHHHHHHHHHHHHHHT
T ss_pred cEEEEEEEecchhHHHHHHHHHHHHHHHh
Confidence 56899998 78889999999999888775
No 270
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=35.41 E-value=94 Score=23.85 Aligned_cols=59 Identities=20% Similarity=0.161 Sum_probs=36.9
Q ss_pred cccCHHHHHHhhcC-CceEEEEeCCCCCccccc-CHHHHHHHH-HHHHHcCcE-EEEcccccc
Q 014603 169 WEVDLDAVEALADE-NTVALVIINPGNPCGNVY-TYQHLQKIA-ETAKKLGIM-VIADEVYDH 227 (422)
Q Consensus 169 ~~~d~~~l~~~~~~-~~~~i~i~~p~nptG~~~-~~~~l~~i~-~~~~~~~~~-li~D~~~~~ 227 (422)
...+.+.|.+.+++ ++..+++-.|-|..|+.- .....+.++ .++.+.++. .++||.++.
T Consensus 40 ~~~~~~~l~~li~~~~~~~ivVGlP~~~nGt~~~~~~~ar~f~~~L~~~~~lpV~~vDEr~Ts 102 (150)
T 1vhx_A 40 GDYGLSRLSELIKDYTIDKIVLGFPKNMNGTVGPRGEASQTFAKVLETTYNVPVVLWDERLTT 102 (150)
T ss_dssp TBCCHHHHHHHHTTSEEEEEEEECCCCBTTBCCHHHHHHHHHHHHHHHHHCSCEEEECCSSCH
T ss_pred hHHHHHHHHHHHHHcCCCEEEEeeeecCCcchhHHHHHHHHHHHHHHHhhCCCEEEecCCCCH
Confidence 34577888888876 567788888966656542 112334444 344455764 457988764
No 271
>3l5o_A Uncharacterized protein from DUF364 family; RARE metals, siderophores, adenosyl binding site; 2.01A {Desulfitobacterium hafniense}
Probab=35.14 E-value=73 Score=27.32 Aligned_cols=78 Identities=12% Similarity=0.022 Sum_probs=47.3
Q ss_pred CCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHH
Q 014603 133 PGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETA 212 (422)
Q Consensus 133 ~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~ 212 (422)
.|++|.+.-.. +........+.++..+..+|..+...+ +.-+..+.. ..++++ ||+.+-...+..|+++|
T Consensus 140 ~g~kV~vIG~f--P~i~~~~~~~~~l~V~E~~p~~g~~p~-~~~~~~lp~-~D~vii------TgstlvN~Tl~~lL~~~ 209 (270)
T 3l5o_A 140 KGKKVGVVGHF--PHLESLLEPICDLSILEWSPEEGDYPL-PASEFILPE-CDYVYI------TCASVVDKTLPRLLELS 209 (270)
T ss_dssp TTSEEEEESCC--TTHHHHHTTTSEEEEEESSCCTTCEEG-GGHHHHGGG-CSEEEE------ETHHHHHTCHHHHHHHT
T ss_pred CCCEEEEECCc--hhHHHHHhcCCCEEEEECCCCCCCCCh-hHHHHhhcc-CCEEEE------EeehhhcCCHHHHHhhC
Confidence 46788777532 455555556778888888775542222 233444443 445554 67666556789999999
Q ss_pred HHcCcEEE
Q 014603 213 KKLGIMVI 220 (422)
Q Consensus 213 ~~~~~~li 220 (422)
+.....++
T Consensus 210 ~~a~~vvl 217 (270)
T 3l5o_A 210 RNARRITL 217 (270)
T ss_dssp TTSSEEEE
T ss_pred CCCCEEEE
Confidence 76433333
No 272
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=35.10 E-value=1.4e+02 Score=25.07 Aligned_cols=97 Identities=10% Similarity=-0.009 Sum_probs=52.1
Q ss_pred CEEEecCHHHHHHHH-HHHhcCCCCEEEecCCCc-cchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEE
Q 014603 112 DVYLTLGCTQAIEVI-LTVLARPGANILLPRPGF-PYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVI 189 (422)
Q Consensus 112 ~i~~~~g~~~a~~~~-~~~l~~~gd~Vl~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i 189 (422)
.+.+.+|++.+|-.. ...|.+.|-+|++..-.- .......+..|.++..+..+-. |.+.+++.+.....=+++
T Consensus 10 KvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~-----d~~~v~~~~~~g~iDiLV 84 (247)
T 4hp8_A 10 RKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFA-----DPLAAKDSFTDAGFDILV 84 (247)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTT-----STTTTTTSSTTTCCCEEE
T ss_pred CEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCC-----CHHHHHHHHHhCCCCEEE
Confidence 455555555565554 556778888777654221 2233444556767766665432 233344444433322445
Q ss_pred eCC-CCCcc--cccCHHHHHHHHHHHH
Q 014603 190 INP-GNPCG--NVYTYQHLQKIAETAK 213 (422)
Q Consensus 190 ~~p-~nptG--~~~~~~~l~~i~~~~~ 213 (422)
.|. ..+.+ .-++.++|+++.++--
T Consensus 85 NNAGi~~~~~~~~~~~~~w~~~~~vNl 111 (247)
T 4hp8_A 85 NNAGIIRRADSVEFSELDWDEVMDVNL 111 (247)
T ss_dssp ECCCCCCCCCGGGCCHHHHHHHHHHHT
T ss_pred ECCCCCCCCCcccccHHHHHHHHHHHh
Confidence 554 22222 2467888988877543
No 273
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=34.67 E-value=79 Score=27.54 Aligned_cols=51 Identities=20% Similarity=0.223 Sum_probs=35.7
Q ss_pred cCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccc
Q 014603 171 VDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDH 227 (422)
Q Consensus 171 ~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~ 227 (422)
.-++.+++.++.+.+.+++.. +|. +.++.+++.+.|+++++.++-..+.+.
T Consensus 83 ~~~~~v~ea~~~Gi~~vVi~t----~G~--~~~~~~~l~~~A~~~gi~viGPNc~Gi 133 (297)
T 2yv2_A 83 FAPDAVYEAVDAGIRLVVVIT----EGI--PVHDTMRFVNYARQKGATIIGPNCPGA 133 (297)
T ss_dssp GHHHHHHHHHHTTCSEEEECC----CCC--CHHHHHHHHHHHHHHTCEEECSSSCEE
T ss_pred HHHHHHHHHHHCCCCEEEEEC----CCC--CHHHHHHHHHHHHHcCCEEEcCCCCee
Confidence 345667777777888665433 232 446788999999999998887776544
No 274
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=34.28 E-value=2e+02 Score=24.09 Aligned_cols=93 Identities=14% Similarity=0.040 Sum_probs=47.0
Q ss_pred CEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC------Cce
Q 014603 112 DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE------NTV 185 (422)
Q Consensus 112 ~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~ 185 (422)
.+++|.+++..=..+...|.+.|-+|++.+-.-.......+ .+.+...+..+- -|.+++++.++. +..
T Consensus 4 ~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~-~~~~~~~~~~Dv-----~~~~~v~~~v~~~~~~~g~iD 77 (247)
T 3ged_A 4 GVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAK-ERPNLFYFHGDV-----ADPLTLKKFVEYAMEKLQRID 77 (247)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHT-TCTTEEEEECCT-----TSHHHHHHHHHHHHHHHSCCC
T ss_pred EEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-hcCCEEEEEecC-----CCHHHHHHHHHHHHHHcCCCC
Confidence 35555555444444556677889888776543322222332 334555554432 244555443321 334
Q ss_pred EEEEeCC-CCCccc--ccCHHHHHHHHHH
Q 014603 186 ALVIINP-GNPCGN--VYTYQHLQKIAET 211 (422)
Q Consensus 186 ~i~i~~p-~nptG~--~~~~~~l~~i~~~ 211 (422)
.+ +.|. .++.+. -++.++|+++.++
T Consensus 78 iL-VNNAG~~~~~~~~~~~~e~~~~~~~v 105 (247)
T 3ged_A 78 VL-VNNACRGSKGILSSLLYEEFDYILSV 105 (247)
T ss_dssp EE-EECCCCCCCCGGGTCCHHHHHHHHHH
T ss_pred EE-EECCCCCCCCCcccCCHHHHHHHHHH
Confidence 33 4444 333332 3567888877764
No 275
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=34.16 E-value=1.3e+02 Score=25.57 Aligned_cols=31 Identities=29% Similarity=0.223 Sum_probs=17.7
Q ss_pred CCEEEecCHHHHHHHHHHHhcCCCCEEEecC
Q 014603 111 DDVYLTLGCTQAIEVILTVLARPGANILLPR 141 (422)
Q Consensus 111 ~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~ 141 (422)
..+++|.++...=..+...|.+.|.+|++..
T Consensus 11 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~ 41 (287)
T 3pxx_A 11 KVVLVTGGARGQGRSHAVKLAEEGADIILFD 41 (287)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCeEEEEc
Confidence 3455554444333444556777888877653
No 276
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12
Probab=33.70 E-value=66 Score=29.20 Aligned_cols=54 Identities=20% Similarity=0.126 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHcCcEEEEcccccccccCCCCCCCccccCCCCCeEEEecCccccCCCCceeEEEEe
Q 014603 203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVT 269 (422)
Q Consensus 203 ~~l~~i~~~~~~~~~~li~D~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~G~r~G~~~~ 269 (422)
+++++|.++|+++|+-+++|=.-..+..-|..... + ++=|-+|..|+|+-+-+.
T Consensus 74 ~~~~~l~~~a~~~g~~vi~DVsp~~~~~Lg~s~~d------------l-~~f~~lGi~gLRLD~Gf~ 127 (385)
T 1x7f_A 74 AEFKEIINHAKDNNMEVILDVAPAVFDQLGISYSD------------L-SFFAELGADGIRLDVGFD 127 (385)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECTTCC------CCC------------T-HHHHHHTCSEEEESSCCS
T ss_pred HHHHHHHHHHHHCCCEEEEECCHHHHHHcCCCHHH------------H-HHHHHcCCCEEEEcCCCC
Confidence 78999999999999999999775543221111111 1 112445888888765553
No 277
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=33.67 E-value=1.5e+02 Score=24.37 Aligned_cols=95 Identities=11% Similarity=0.064 Sum_probs=43.4
Q ss_pred CEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC------Cce
Q 014603 112 DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE------NTV 185 (422)
Q Consensus 112 ~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~ 185 (422)
.+++|.++...=..+...|.+.|.+|++..-.-..........+.++..+..+- -|.+.+++.++. +..
T Consensus 5 ~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~g~id 79 (235)
T 3l6e_A 5 HIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADL-----AHHEDVDVAFAAAVEWGGLPE 79 (235)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCT-----TSHHHHHHHHHHHHHHHCSCS
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCC-----CCHHHHHHHHHHHHHhcCCCc
Confidence 345554444333344556677888877754333222333332233455554432 244555443321 344
Q ss_pred EEEEeCCCCCccc--ccCHHHHHHHHHH
Q 014603 186 ALVIINPGNPCGN--VYTYQHLQKIAET 211 (422)
Q Consensus 186 ~i~i~~p~nptG~--~~~~~~l~~i~~~ 211 (422)
.++.+....+.+. ..+.++++++.++
T Consensus 80 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 107 (235)
T 3l6e_A 80 LVLHCAGTGEFGPVGVYTAEQIRRVMES 107 (235)
T ss_dssp EEEEECCCC------CCCHHHHHHHHHH
T ss_pred EEEECCCCCCCCChHhCCHHHHHHHHHH
Confidence 4544333322222 3466777776664
No 278
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=33.62 E-value=1.5e+02 Score=22.75 Aligned_cols=82 Identities=17% Similarity=0.145 Sum_probs=45.3
Q ss_pred CCEEEecCCCccchHHHHhh-CCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHH
Q 014603 134 GANILLPRPGFPYYEARATH-SHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETA 212 (422)
Q Consensus 134 gd~Vl~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~ 212 (422)
|-+++... +.....+. .|+++..+.-.++++ ++ ++.+.+..+..-++|..| .|-|......|...|.+.|
T Consensus 39 Gf~l~AT~----gTa~~L~e~~Gl~v~~v~k~~eGG---~p-~I~d~I~~geIdlVInt~-~pl~~~~h~~D~~~IrR~A 109 (152)
T 1b93_A 39 QHVLYATG----TTGNLISRATGMNVNAMLSGPMGG---DQ-QVGALISEGKIDVLIFFW-DPLNAVPHDPDVKALLRLA 109 (152)
T ss_dssp TSEEEEET----THHHHHHHHHCCCCEEECCGGGTH---HH-HHHHHHHTTCCCEEEEEC-CTTSCCTTHHHHHHHHHHH
T ss_pred CCEEEEcc----HHHHHHHHHhCceeEEEEecCCCC---Cc-hHHHHHHCCCccEEEEcC-CcccCCcccccHHHHHHHH
Confidence 44555544 22333333 576766554222211 32 455656555444444444 2334222257899999999
Q ss_pred HHcCcEEEEccc
Q 014603 213 KKLGIMVIADEV 224 (422)
Q Consensus 213 ~~~~~~li~D~~ 224 (422)
..||+.++.--+
T Consensus 110 ~~~~IP~~T~la 121 (152)
T 1b93_A 110 TVWNIPVATNVA 121 (152)
T ss_dssp HHTTCCEESSHH
T ss_pred HHcCCCEEeCHH
Confidence 999999885433
No 279
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=33.48 E-value=1.1e+02 Score=24.93 Aligned_cols=94 Identities=12% Similarity=0.004 Sum_probs=46.5
Q ss_pred EEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC---CceEEEE
Q 014603 113 VYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE---NTVALVI 189 (422)
Q Consensus 113 i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~---~~~~i~i 189 (422)
+++|.++...=..+...|.+.|.+|++..-.-..........+.++..+..+- -|.+.+++.++. ....++.
T Consensus 4 vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~d~lv~ 78 (230)
T 3guy_A 4 IVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDL-----ASHQEVEQLFEQLDSIPSTVVH 78 (230)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCT-----TCHHHHHHHHHSCSSCCSEEEE
T ss_pred EEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecC-----CCHHHHHHHHHHHhhcCCEEEE
Confidence 55555544433444556667787777654433333344444444444444332 255666665533 2234433
Q ss_pred eCCCCCccc--ccCHHHHHHHHHH
Q 014603 190 INPGNPCGN--VYTYQHLQKIAET 211 (422)
Q Consensus 190 ~~p~nptG~--~~~~~~l~~i~~~ 211 (422)
+....+.+. ..+.++++++.+.
T Consensus 79 ~Ag~~~~~~~~~~~~~~~~~~~~~ 102 (230)
T 3guy_A 79 SAGSGYFGLLQEQDPEQIQTLIEN 102 (230)
T ss_dssp CCCCCCCSCGGGSCHHHHHHHHHH
T ss_pred eCCcCCCCccccCCHHHHHHHHHH
Confidence 332222232 3566777776654
No 280
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=33.34 E-value=55 Score=27.75 Aligned_cols=50 Identities=22% Similarity=0.345 Sum_probs=34.7
Q ss_pred cccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEccc
Q 014603 169 WEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEV 224 (422)
Q Consensus 169 ~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~ 224 (422)
+.+|.-++.++...+..++++... .++.++++++.+.|++.|+-+++|-.
T Consensus 109 fi~~~~qi~ea~~~GAD~ilLi~a------~l~~~~l~~l~~~a~~lGl~~lvEv~ 158 (251)
T 1i4n_A 109 FYIDTVQVKLASSVGADAILIIAR------ILTAEQIKEIYEAAEELGMDSLVEVH 158 (251)
T ss_dssp CCCSTHHHHHHHHTTCSEEEEEGG------GSCHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred CCCCHHHHHHHHHcCCCEEEEecc------cCCHHHHHHHHHHHHHcCCeEEEEeC
Confidence 456666666654445555554332 46668899999999999999988743
No 281
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=33.05 E-value=2.1e+02 Score=23.71 Aligned_cols=65 Identities=15% Similarity=-0.084 Sum_probs=32.0
Q ss_pred CCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhh
Q 014603 111 DDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALA 180 (422)
Q Consensus 111 ~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~ 180 (422)
..+++|.++...=..+...|.+.|.+|++..-.-.......+..+.++..+..+- -|.+.+++.+
T Consensus 13 k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~ 77 (265)
T 2o23_A 13 LVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADV-----TSEKDVQTAL 77 (265)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCT-----TCHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCC-----CCHHHHHHHH
Confidence 3455554443333444556677787776654332233333333344555555432 2445555543
No 282
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A*
Probab=32.95 E-value=21 Score=35.81 Aligned_cols=28 Identities=29% Similarity=0.506 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHcCcEEEEcccccccc
Q 014603 202 YQHLQKIAETAKKLGIMVIADEVYDHLA 229 (422)
Q Consensus 202 ~~~l~~i~~~~~~~~~~li~D~~~~~~~ 229 (422)
.++++++++.|+++|+-||.|-++....
T Consensus 315 ~~dfk~LV~~aH~~GI~VIlDvV~NHt~ 342 (718)
T 2e8y_A 315 KTELKQMINTLHQHGLRVILDVVFNHVY 342 (718)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTCCS
T ss_pred HHHHHHHHHHHHHCCCEEEEEEeccccc
Confidence 4899999999999999999999987543
No 283
>1c7s_A Beta-N-acetylhexosaminidase; glycosyl hydrolase, chitinolysis, A/B(TIM)-barrel, site directed mutagenesis; HET: CBS; 1.80A {Serratia marcescens} SCOP: b.1.18.2 b.2.2.3 c.1.8.6 d.92.2.1 PDB: 1c7t_A* 1qba_A 1qbb_A*
Probab=32.45 E-value=1.1e+02 Score=31.33 Aligned_cols=29 Identities=28% Similarity=0.294 Sum_probs=24.9
Q ss_pred CcccccCHHHHHHHHHHHHHcCcEEE--Ecc
Q 014603 195 PCGNVYTYQHLQKIAETAKKLGIMVI--ADE 223 (422)
Q Consensus 195 ptG~~~~~~~l~~i~~~~~~~~~~li--~D~ 223 (422)
+.|-.|+.+++++|++.|+++|+-|| +|.
T Consensus 392 ~~~g~YT~~direIv~YA~~rgI~VIPEID~ 422 (858)
T 1c7s_A 392 VYGGFFSRQDYIDIIKYAQARQIEVIPEIDM 422 (858)
T ss_dssp CEECCBCHHHHHHHHHHHHTTTCEEEEEEEE
T ss_pred ccCCCCCHHHHHHHHHHHHHcCCEEEEcccc
Confidence 34678999999999999999999988 553
No 284
>2yl5_A Beta-N-acetylhexosaminidase; hydrolase; 2.15A {Streptococcus pneumoniae} PDB: 2yla_A* 2yl9_A*
Probab=31.86 E-value=36 Score=31.75 Aligned_cols=31 Identities=26% Similarity=0.353 Sum_probs=26.3
Q ss_pred CCcccccCHHHHHHHHHHHHHcCcEEE--Eccc
Q 014603 194 NPCGNVYTYQHLQKIAETAKKLGIMVI--ADEV 224 (422)
Q Consensus 194 nptG~~~~~~~l~~i~~~~~~~~~~li--~D~~ 224 (422)
++.|..|+.+++++|++.|+++|+-|| +|.-
T Consensus 86 ~~~~~~YT~~di~eIv~YA~~rgI~VIPEID~P 118 (442)
T 2yl5_A 86 DPNGTALTQAEVTELIEYAKSKDIGLIPAINSP 118 (442)
T ss_dssp CTTCSCBCHHHHHHHHHHHHTTTCEEEEEEEES
T ss_pred CCCCCCcCHHHHHHHHHHHHHcCCeeeeecccc
Confidence 456778999999999999999999988 5543
No 285
>2yl6_A Beta-N-acetylhexosaminidase; peptidoglycan-anchor, hydrolase; HET: ETE; 1.60A {Streptococcus pneumoniae} PDB: 2yll_A* 2yl8_A* 3rpm_A*
Probab=31.66 E-value=35 Score=31.72 Aligned_cols=30 Identities=30% Similarity=0.416 Sum_probs=25.8
Q ss_pred CcccccCHHHHHHHHHHHHHcCcEEE--Eccc
Q 014603 195 PCGNVYTYQHLQKIAETAKKLGIMVI--ADEV 224 (422)
Q Consensus 195 ptG~~~~~~~l~~i~~~~~~~~~~li--~D~~ 224 (422)
|.|..|+.+++++|++.|+++|+-|| +|.-
T Consensus 84 ~~~~~YT~~di~eIv~YA~~rgI~VIPEID~P 115 (434)
T 2yl6_A 84 PNGNHLTESQMTDLINYAKDKGIGLIPTVNSP 115 (434)
T ss_dssp TTCSCEEHHHHHHHHHHHHHTTCEEEEEEEES
T ss_pred CCCCccCHHHHHHHHHHHHHcCCEEEEecccc
Confidence 56778999999999999999999988 5543
No 286
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=31.63 E-value=36 Score=31.71 Aligned_cols=32 Identities=19% Similarity=0.394 Sum_probs=27.2
Q ss_pred CcccccCHHHHHHHHHHHHHcCcEEEEcccccccc
Q 014603 195 PCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLA 229 (422)
Q Consensus 195 ptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~ 229 (422)
..|.. ++++++++.|+++|+-||.|-++-...
T Consensus 60 ~~Gt~---~dfk~Lv~~aH~~Gi~VilD~V~NH~~ 91 (448)
T 1g94_A 60 RGGNR---AQFIDMVNRCSAAGVDIYVDTLINHMA 91 (448)
T ss_dssp TTBCH---HHHHHHHHHHHHTTCEEEEEEECSEEC
T ss_pred CCCCH---HHHHHHHHHHHHCCCEEEEEEeecccc
Confidence 34554 999999999999999999999987544
No 287
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=30.88 E-value=1.3e+02 Score=25.00 Aligned_cols=89 Identities=13% Similarity=0.050 Sum_probs=44.5
Q ss_pred EEEecCHHHHHHHHHHHhcCC--C-CEE-EecCCCccchHHHHhhCCCeEEEeeccCCC-CcccCHHHHHHhh-cCCceE
Q 014603 113 VYLTLGCTQAIEVILTVLARP--G-ANI-LLPRPGFPYYEARATHSHLEVRHFDLLPAK-GWEVDLDAVEALA-DENTVA 186 (422)
Q Consensus 113 i~~~~g~~~a~~~~~~~l~~~--g-d~V-l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~d~~~l~~~~-~~~~~~ 186 (422)
+++.+|+.+.+..++..+.+. + +.+ ++.++.-......++..|+++..++...-. ....+. ++.+.+ ..++.+
T Consensus 26 ~~l~SG~g~~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A~~~gIp~~~~~~~~~~~r~~~~~-~~~~~l~~~~~Dl 104 (229)
T 3auf_A 26 GVLISGSGTNLQAILDGCREGRIPGRVAVVISDRADAYGLERARRAGVDALHMDPAAYPSRTAFDA-ALAERLQAYGVDL 104 (229)
T ss_dssp EEEESSCCHHHHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHHHHTTCEEEECCGGGSSSHHHHHH-HHHHHHHHTTCSE
T ss_pred EEEEeCCcHHHHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHHHHcCCCEEEECcccccchhhccH-HHHHHHHhcCCCE
Confidence 345566656666777776554 2 222 333322223356788889887765432110 001122 222333 235666
Q ss_pred EEEeCCCCCcccccCHHHHH
Q 014603 187 LVIINPGNPCGNVYTYQHLQ 206 (422)
Q Consensus 187 i~i~~p~nptG~~~~~~~l~ 206 (422)
+++.. .|.++|.+-+.
T Consensus 105 iv~ag----y~~IL~~~~l~ 120 (229)
T 3auf_A 105 VCLAG----YMRLVRGPMLT 120 (229)
T ss_dssp EEESS----CCSCCCHHHHH
T ss_pred EEEcC----hhHhCCHHHHh
Confidence 66544 56777755554
No 288
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A*
Probab=30.86 E-value=33 Score=34.30 Aligned_cols=27 Identities=26% Similarity=0.455 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHHcCcEEEEccccccc
Q 014603 202 YQHLQKIAETAKKLGIMVIADEVYDHL 228 (422)
Q Consensus 202 ~~~l~~i~~~~~~~~~~li~D~~~~~~ 228 (422)
.++++++++.|+++|+-||.|-++...
T Consensus 254 ~~efk~lV~~~H~~Gi~VilDvV~NH~ 280 (714)
T 2ya0_A 254 IAEFKNLINEIHKRGMGAILDVVYNHT 280 (714)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTBC
T ss_pred HHHHHHHHHHHHHCCCEEEEEeccCcc
Confidence 489999999999999999999998754
No 289
>3bzy_B ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3c00_B 3bzl_C 3bzo_B 3bzv_B 3c03_C 3bzz_B 3bzx_B
Probab=30.83 E-value=29 Score=23.73 Aligned_cols=24 Identities=25% Similarity=0.178 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHcCcEEEEccccc
Q 014603 203 QHLQKIAETAKKLGIMVIADEVYD 226 (422)
Q Consensus 203 ~~l~~i~~~~~~~~~~li~D~~~~ 226 (422)
.--.+|.++++++|+.++.|..-.
T Consensus 27 ~~A~~I~~~A~e~~VPi~e~~~LA 50 (83)
T 3bzy_B 27 AKALQIIKLAELYDIPVIEDIPLA 50 (83)
T ss_dssp HHHHHHHHHHHHTTCCEEECHHHH
T ss_pred HHHHHHHHHHHHcCCCEEeCHHHH
Confidence 346888999999999999998644
No 290
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=30.82 E-value=1.2e+02 Score=24.76 Aligned_cols=88 Identities=10% Similarity=0.009 Sum_probs=44.6
Q ss_pred EEecCHHHHHHHHHHHhcCC--CCEE--EecCCCccchHHHHhhCCCeEEEeeccCCCC-cccCHHHHHHhh-cCCceEE
Q 014603 114 YLTLGCTQAIEVILTVLARP--GANI--LLPRPGFPYYEARATHSHLEVRHFDLLPAKG-WEVDLDAVEALA-DENTVAL 187 (422)
Q Consensus 114 ~~~~g~~~a~~~~~~~l~~~--gd~V--l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~d~~~l~~~~-~~~~~~i 187 (422)
++.+|+.+.+..++..+... +-+| ++.++.-......++..|+++..++.....+ ...+. ++.+.+ ..++..+
T Consensus 8 vl~sG~g~~~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A~~~gIp~~~~~~~~~~~~~~~~~-~~~~~l~~~~~Dli 86 (212)
T 3av3_A 8 VFASGSGTNFQAIVDAAKRGDLPARVALLVCDRPGAKVIERAARENVPAFVFSPKDYPSKAAFES-EILRELKGRQIDWI 86 (212)
T ss_dssp EECCSSCHHHHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHHHHTTCCEEECCGGGSSSHHHHHH-HHHHHHHHTTCCEE
T ss_pred EEEECCcHHHHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHHHHcCCCEEEeCcccccchhhhHH-HHHHHHHhcCCCEE
Confidence 45556555666667776554 2222 3444333345677888898877654321110 01121 222323 3356666
Q ss_pred EEeCCCCCcccccCHHHHH
Q 014603 188 VIINPGNPCGNVYTYQHLQ 206 (422)
Q Consensus 188 ~i~~p~nptG~~~~~~~l~ 206 (422)
++.. .|.++|.+-++
T Consensus 87 v~a~----y~~il~~~~l~ 101 (212)
T 3av3_A 87 ALAG----YMRLIGPTLLS 101 (212)
T ss_dssp EESS----CCSCCCHHHHH
T ss_pred EEch----hhhhCCHHHHh
Confidence 6543 56677755554
No 291
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=30.13 E-value=45 Score=30.95 Aligned_cols=28 Identities=21% Similarity=0.311 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHcCcEEEEcccccccc
Q 014603 202 YQHLQKIAETAKKLGIMVIADEVYDHLA 229 (422)
Q Consensus 202 ~~~l~~i~~~~~~~~~~li~D~~~~~~~ 229 (422)
.++++++++.|+++|+.||.|-++....
T Consensus 69 ~~df~~lv~~aH~~Gi~VilD~V~NH~~ 96 (441)
T 1lwj_A 69 EREFKEMIEAFHDSGIKVVLDLPIHHTG 96 (441)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTBCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCCCccc
Confidence 4899999999999999999999976543
No 292
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=29.70 E-value=2e+02 Score=24.03 Aligned_cols=32 Identities=9% Similarity=0.067 Sum_probs=18.4
Q ss_pred CCCEEEecCHHHHHHHHHHHhcCCCCEEEecC
Q 014603 110 PDDVYLTLGCTQAIEVILTVLARPGANILLPR 141 (422)
Q Consensus 110 ~~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~ 141 (422)
...+++|.++...=..+...|.+.|.+|++..
T Consensus 27 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~ 58 (260)
T 3gem_A 27 SAPILITGASQRVGLHCALRLLEHGHRVIISY 58 (260)
T ss_dssp CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 34566665544433445566777787776654
No 293
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=29.60 E-value=2e+02 Score=22.56 Aligned_cols=46 Identities=7% Similarity=-0.135 Sum_probs=27.6
Q ss_pred HHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCC
Q 014603 121 QAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPA 166 (422)
Q Consensus 121 ~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 166 (422)
+.+..++..+.+.-|.|++..|................+.+++.++
T Consensus 63 ~~l~~~l~~l~~~yD~viiD~~~~~~~~~~~~l~~ad~viiv~~~~ 108 (206)
T 4dzz_A 63 EKDVYGIRKDLADYDFAIVDGAGSLSVITSAAVMVSDLVIIPVTPS 108 (206)
T ss_dssp HHHHHTHHHHTTTSSEEEEECCSSSSHHHHHHHHHCSEEEEEECSC
T ss_pred HHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHCCEEEEEecCC
Confidence 5666666666666789999887665433222233345566666554
No 294
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=29.39 E-value=73 Score=27.60 Aligned_cols=50 Identities=22% Similarity=0.220 Sum_probs=35.1
Q ss_pred CHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcccccc
Q 014603 172 DLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDH 227 (422)
Q Consensus 172 d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~ 227 (422)
-.+.+++.++.+.+.+++.. +| ++.++.+++.+.++++++.++-..+.+.
T Consensus 77 ~~~~~~ea~~~Gi~~vVi~t----~G--~~~~~~~~l~~~a~~~gi~vigPNc~Gi 126 (288)
T 1oi7_A 77 AADAALEAAHAGIPLIVLIT----EG--IPTLDMVRAVEEIKALGSRLIGGNCPGI 126 (288)
T ss_dssp HHHHHHHHHHTTCSEEEECC----SC--CCHHHHHHHHHHHHHHTCEEEESSSCEE
T ss_pred HHHHHHHHHHCCCCEEEEEC----CC--CCHHHHHHHHHHHHHcCCEEEeCCCCeE
Confidence 34566677777777665533 23 2446788999999999999887876654
No 295
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=29.13 E-value=43 Score=30.67 Aligned_cols=28 Identities=25% Similarity=0.335 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHcCcEEEEcccccccc
Q 014603 202 YQHLQKIAETAKKLGIMVIADEVYDHLA 229 (422)
Q Consensus 202 ~~~l~~i~~~~~~~~~~li~D~~~~~~~ 229 (422)
.++++++++.|+++|+.||.|-++....
T Consensus 68 ~~d~~~lv~~~h~~Gi~VilD~V~NH~~ 95 (405)
T 1ht6_A 68 AAELKSLIGALHGKGVQAIADIVINHRC 95 (405)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEECcCccc
Confidence 3899999999999999999999987544
No 296
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=28.35 E-value=49 Score=30.67 Aligned_cols=28 Identities=43% Similarity=0.559 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHHcCcEEEEcccccccc
Q 014603 202 YQHLQKIAETAKKLGIMVIADEVYDHLA 229 (422)
Q Consensus 202 ~~~l~~i~~~~~~~~~~li~D~~~~~~~ 229 (422)
.++++++++.|+++|+-||.|-+.....
T Consensus 86 ~~df~~lv~~~H~~Gi~VilD~V~NH~~ 113 (435)
T 1mxg_A 86 KEELVRLIQTAHAYGIKVIADVVINHRA 113 (435)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEECccccc
Confidence 3999999999999999999999976543
No 297
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=28.27 E-value=1.6e+02 Score=25.44 Aligned_cols=73 Identities=19% Similarity=0.226 Sum_probs=40.7
Q ss_pred CCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHh---hcCCceEEEEeCCCCCcccccCHHHHHHHH
Q 014603 133 PGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEAL---ADENTVALVIINPGNPCGNVYTYQHLQKIA 209 (422)
Q Consensus 133 ~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~---~~~~~~~i~i~~p~nptG~~~~~~~l~~i~ 209 (422)
++..+++..+.|. -.++.+|++...+... +-.+.+..|.++ ++++...+++.+++.+.- -.+.
T Consensus 189 ~~~~~v~~H~af~---Yf~~~yGl~~~~~~~~---~~eps~~~l~~l~~~ik~~~v~~If~e~~~~~~------~~~~-- 254 (291)
T 1pq4_A 189 PQRKFIVFHPSWA---YFARDYNLVQIPIEVE---GQEPSAQELKQLIDTAKENNLTMVFGETQFSTK------SSEA-- 254 (291)
T ss_dssp SCCEEEESSCCCH---HHHHHTTCEEEESCBT---TBCCCHHHHHHHHHHHHTTTCCEEEEETTSCCH------HHHH--
T ss_pred CCCEEEEECCchH---HHHHHCCCEEeecccC---CCCCCHHHHHHHHHHHHHcCCCEEEEeCCCChH------HHHH--
Confidence 4677888777664 4567788886654321 234566666554 444444444566654332 2233
Q ss_pred HHHHHcCcEEE
Q 014603 210 ETAKKLGIMVI 220 (422)
Q Consensus 210 ~~~~~~~~~li 220 (422)
++++.|+.++
T Consensus 255 -ia~~~g~~v~ 264 (291)
T 1pq4_A 255 -IAAEIGAGVE 264 (291)
T ss_dssp -HHHHHTCEEE
T ss_pred -HHHHcCCeEE
Confidence 3557777654
No 298
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=28.22 E-value=1.8e+02 Score=23.94 Aligned_cols=67 Identities=7% Similarity=0.011 Sum_probs=32.9
Q ss_pred CCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC
Q 014603 111 DDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE 182 (422)
Q Consensus 111 ~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~ 182 (422)
+.+++|.++...=..+...|.+.|.+|++..-.-.............+..+..+. -+.+.+++.+++
T Consensus 15 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~ 81 (249)
T 3f9i_A 15 KTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNL-----ANKEECSNLISK 81 (249)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCT-----TSHHHHHHHHHT
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCC-----CCHHHHHHHHHh
Confidence 3455554444333344556777888877765433333333333333444333322 255666665543
No 299
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=28.20 E-value=2.7e+02 Score=23.42 Aligned_cols=95 Identities=11% Similarity=-0.037 Sum_probs=45.6
Q ss_pred CCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHH---HhhCCCeEEEeeccCCCCcccCHHHHHHhhcC-----
Q 014603 111 DDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEAR---ATHSHLEVRHFDLLPAKGWEVDLDAVEALADE----- 182 (422)
Q Consensus 111 ~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~----- 182 (422)
..+++|.++...=..+.+.|.+.|.+|++..-.-...... ....+.++..+..+- -|.+.+++.++.
T Consensus 27 k~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~ 101 (271)
T 4ibo_A 27 RTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDV-----TSESEIIEAFARLDEQG 101 (271)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCT-----TCHHHHHHHHHHHHHHT
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCC-----CCHHHHHHHHHHHHHHC
Confidence 3455554444333445566777888888765433222222 222355565555432 245555554331
Q ss_pred -CceEEEEeCCCCCccc--ccCHHHHHHHHH
Q 014603 183 -NTVALVIINPGNPCGN--VYTYQHLQKIAE 210 (422)
Q Consensus 183 -~~~~i~i~~p~nptG~--~~~~~~l~~i~~ 210 (422)
+...++-+......+. -.+.+++++..+
T Consensus 102 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~ 132 (271)
T 4ibo_A 102 IDVDILVNNAGIQFRKPMIELETADWQRVID 132 (271)
T ss_dssp CCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCchhCCHHHHHHHHH
Confidence 3444443322222221 346677776655
No 300
>2j9r_A Thymidine kinase; TK1, DNK, lasso, transferase, ATP-binding, deoxyribonucleoside kinase, DNA synthesis, phosphate accept nucleotide-binding; HET: THM; 2.7A {Bacillus anthracis} PDB: 2ja1_A*
Probab=28.15 E-value=98 Score=25.47 Aligned_cols=92 Identities=13% Similarity=0.128 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHhcCCCCEEEecCCCccc---hHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCC
Q 014603 119 CTQAIEVILTVLARPGANILLPRPGFPY---YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNP 195 (422)
Q Consensus 119 ~~~a~~~~~~~l~~~gd~Vl~~~~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~np 195 (422)
+|+++..+.+.. ..|.+|++..|.-.. -...+...|.....+++.. .+++.+.+..+..+|++-..+.
T Consensus 42 TT~lL~~a~r~~-~~g~kVli~k~~~d~R~ge~~i~s~~g~~~~a~~~~~-------~~~~~~~~~~~~dvViIDEaQF- 112 (214)
T 2j9r_A 42 SEELIRRVRRTQ-FAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSA-------SKDIFKHITEEMDVIAIDEVQF- 112 (214)
T ss_dssp HHHHHHHHHHHH-HTTCCEEEEECC-----------------CCEEECSS-------GGGGGGGCCSSCCEEEECCGGG-
T ss_pred HHHHHHHHHHHH-HCCCEEEEEEeccCCcchHHHHHhhcCCeeEEeecCC-------HHHHHHHHhcCCCEEEEECccc-
Confidence 466677666554 467788887665432 1233444455544444321 1233333333456666666666
Q ss_pred cccccCHHHHHHHHHHHHHcCcEEEEccc
Q 014603 196 CGNVYTYQHLQKIAETAKKLGIMVIADEV 224 (422)
Q Consensus 196 tG~~~~~~~l~~i~~~~~~~~~~li~D~~ 224 (422)
++.+.++.+.+++.+ |+.||+=.-
T Consensus 113 ----~~~~~V~~l~~l~~~-~~~Vi~~Gl 136 (214)
T 2j9r_A 113 ----FDGDIVEVVQVLANR-GYRVIVAGL 136 (214)
T ss_dssp ----SCTTHHHHHHHHHHT-TCEEEEEEC
T ss_pred ----CCHHHHHHHHHHhhC-CCEEEEEec
Confidence 555667666666654 888886444
No 301
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=28.14 E-value=2.6e+02 Score=23.17 Aligned_cols=94 Identities=15% Similarity=-0.033 Sum_probs=42.2
Q ss_pred CEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC------Cce
Q 014603 112 DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE------NTV 185 (422)
Q Consensus 112 ~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~ 185 (422)
.+++|.++...=..+...|.+.|.+|++..-.-..........+..+..+..+- -|.+.+++.++. +..
T Consensus 7 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~g~iD 81 (254)
T 1hdc_A 7 TVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDV-----TIEEDWQRVVAYAREEFGSVD 81 (254)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCT-----TCHHHHHHHHHHHHHHHSCCC
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecC-----CCHHHHHHHHHHHHHHcCCCC
Confidence 455554443333344556677888777653222222222333344455554432 244555544331 344
Q ss_pred EEEEeCCCCCcc--cccCHHHHHHHHH
Q 014603 186 ALVIINPGNPCG--NVYTYQHLQKIAE 210 (422)
Q Consensus 186 ~i~i~~p~nptG--~~~~~~~l~~i~~ 210 (422)
.++.+......+ ...+.+++++..+
T Consensus 82 ~lv~nAg~~~~~~~~~~~~~~~~~~~~ 108 (254)
T 1hdc_A 82 GLVNNAGISTGMFLETESVERFRKVVE 108 (254)
T ss_dssp EEEECCCCCCCSCGGGSCHHHHHHHHH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 444333222222 1245566665544
No 302
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=27.99 E-value=52 Score=31.42 Aligned_cols=33 Identities=24% Similarity=0.324 Sum_probs=27.6
Q ss_pred CcccccCHHHHHHHHHHHHHcCcEEEEccccccccc
Q 014603 195 PCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAF 230 (422)
Q Consensus 195 ptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~~~~~ 230 (422)
..|.. ++++++++.|+++|+-||.|-++-....
T Consensus 88 ~~Gt~---~dfk~Lv~~aH~~GI~VilD~V~NHt~~ 120 (527)
T 1gcy_A 88 RYGSD---AQLRQAASALGGAGVKVLYDVVPNHMNR 120 (527)
T ss_dssp SSCCH---HHHHHHHHHHHHTTCEEEEEECCSBCCT
T ss_pred CCCCH---HHHHHHHHHHHHCCCEEEEEEeecCcCC
Confidence 34554 9999999999999999999999876543
No 303
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=27.94 E-value=73 Score=26.82 Aligned_cols=51 Identities=16% Similarity=0.263 Sum_probs=32.2
Q ss_pred HHHHHHhhcCCceEEEEeCCCCC----cccccCH----HHHHHHHHHHHHcCcEEEEccc
Q 014603 173 LDAVEALADENTVALVIINPGNP----CGNVYTY----QHLQKIAETAKKLGIMVIADEV 224 (422)
Q Consensus 173 ~~~l~~~~~~~~~~i~i~~p~np----tG~~~~~----~~l~~i~~~~~~~~~~li~D~~ 224 (422)
.+.+++++..+...+-+=..+.+ .|. ++. +..+++.++|+++++.+|+++-
T Consensus 46 ~~~~~~al~~Gv~~vqlR~K~~~~~~~~~~-l~~~~~~~~a~~l~~l~~~~~~~liInd~ 104 (243)
T 3o63_A 46 AQFAEAALAGGVDIIQLRDKGSPGELRFGP-LQARDELAACEILADAAHRYGALFAVNDR 104 (243)
T ss_dssp HHHHHHHHHTTCSEEEECCTTCHHHHHHCS-CCHHHHHHHHHHHHHHHHHTTCEEEEESC
T ss_pred HHHHHHHHHCCCCEEEEccCCCCccccccC-CCHHHHHHHHHHHHHHHHhhCCEEEEeCH
Confidence 35566677767776666565532 011 111 2347788999999998888554
No 304
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=27.63 E-value=41 Score=31.65 Aligned_cols=28 Identities=25% Similarity=0.264 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHcCcEEEEcccccccc
Q 014603 202 YQHLQKIAETAKKLGIMVIADEVYDHLA 229 (422)
Q Consensus 202 ~~~l~~i~~~~~~~~~~li~D~~~~~~~ 229 (422)
.++++++++.|+++|+-||.|-++-...
T Consensus 80 ~~df~~lv~~aH~~Gi~VilD~V~NH~~ 107 (480)
T 1ud2_A 80 KAQLERAIGSLKSNDINVYGDVVMNHKM 107 (480)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEccCccc
Confidence 3999999999999999999999986543
No 305
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=27.36 E-value=42 Score=31.63 Aligned_cols=28 Identities=25% Similarity=0.269 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHcCcEEEEcccccccc
Q 014603 202 YQHLQKIAETAKKLGIMVIADEVYDHLA 229 (422)
Q Consensus 202 ~~~l~~i~~~~~~~~~~li~D~~~~~~~ 229 (422)
.++++++++.|+++|+-||.|-+.-...
T Consensus 78 ~~df~~lv~~aH~~Gi~VilD~V~NH~~ 105 (483)
T 3bh4_A 78 KSELQDAIGSLHSRNVQVYGDVVLNHKA 105 (483)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEccCccc
Confidence 3999999999999999999999976543
No 306
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=27.26 E-value=2.7e+02 Score=23.07 Aligned_cols=95 Identities=14% Similarity=-0.034 Sum_probs=45.6
Q ss_pred CCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHH---HhhCCCeEEEeeccCCCCcccCHHHHHHhhc-----C
Q 014603 111 DDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEAR---ATHSHLEVRHFDLLPAKGWEVDLDAVEALAD-----E 182 (422)
Q Consensus 111 ~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-----~ 182 (422)
..+++|.++...=..+...|.+.|.+|++..-.-...... ....+.++..+..+-. |.+.+++.++ .
T Consensus 8 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~~g 82 (252)
T 3h7a_A 8 ATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDAR-----NEDEVTAFLNAADAHA 82 (252)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTT-----CHHHHHHHHHHHHHHS
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCC-----CHHHHHHHHHHHHhhC
Confidence 3455555544433444556777888877754333322222 2233556666665432 4455544332 1
Q ss_pred CceEEEEeCCCCCccc--ccCHHHHHHHHH
Q 014603 183 NTVALVIINPGNPCGN--VYTYQHLQKIAE 210 (422)
Q Consensus 183 ~~~~i~i~~p~nptG~--~~~~~~l~~i~~ 210 (422)
+...++.+......+. -.+.+++++..+
T Consensus 83 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 112 (252)
T 3h7a_A 83 PLEVTIFNVGANVNFPILETTDRVFRKVWE 112 (252)
T ss_dssp CEEEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CceEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 3343433322222222 355666766554
No 307
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=26.98 E-value=2.5e+02 Score=23.71 Aligned_cols=95 Identities=16% Similarity=0.156 Sum_probs=46.5
Q ss_pred CEEEecCHHHHHHH-HHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC------Cc
Q 014603 112 DVYLTLGCTQAIEV-ILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE------NT 184 (422)
Q Consensus 112 ~i~~~~g~~~a~~~-~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~ 184 (422)
.+++.+|++..+-. +...|.+.|.+|++..-.-..........+.++..+..+- -|.+.+++.++. +.
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g~i 103 (272)
T 4dyv_A 29 KIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDV-----TDPDSVRALFTATVEKFGRV 103 (272)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCT-----TSHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecC-----CCHHHHHHHHHHHHHHcCCC
Confidence 45555555555544 4456777888877764333333334444444555555432 244555544321 34
Q ss_pred eEEEEeCCC-CCcc--cccCHHHHHHHHHH
Q 014603 185 VALVIINPG-NPCG--NVYTYQHLQKIAET 211 (422)
Q Consensus 185 ~~i~i~~p~-nptG--~~~~~~~l~~i~~~ 211 (422)
..++-+... .+.+ .-++.++++++.++
T Consensus 104 D~lVnnAg~~~~~~~~~~~~~~~~~~~~~v 133 (272)
T 4dyv_A 104 DVLFNNAGTGAPAIPMEDLTFAQWKQVVDT 133 (272)
T ss_dssp CEEEECCCCCCCSSCGGGCCHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHHh
Confidence 444433222 2222 13466777766553
No 308
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=26.96 E-value=43 Score=31.92 Aligned_cols=28 Identities=29% Similarity=0.412 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHcCcEEEEcccccccc
Q 014603 202 YQHLQKIAETAKKLGIMVIADEVYDHLA 229 (422)
Q Consensus 202 ~~~l~~i~~~~~~~~~~li~D~~~~~~~ 229 (422)
.++++++++.|+++|+-||+|-+.....
T Consensus 81 ~~dfk~Lv~~aH~~Gi~VilD~V~NH~~ 108 (515)
T 1hvx_A 81 KAQYLQAIQAAHAAGMQVYADVVFDHKG 108 (515)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEecCCcc
Confidence 3999999999999999999999976643
No 309
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=26.94 E-value=2.4e+02 Score=23.87 Aligned_cols=30 Identities=20% Similarity=0.160 Sum_probs=17.7
Q ss_pred CCEEEecCHHHHHHHHHHHhcCCCCEEEec
Q 014603 111 DDVYLTLGCTQAIEVILTVLARPGANILLP 140 (422)
Q Consensus 111 ~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~ 140 (422)
..+++|.++...=..+.+.|.+.|.+|++.
T Consensus 12 k~~lVTGas~gIG~aia~~la~~G~~V~~~ 41 (286)
T 3uve_A 12 KVAFVTGAARGQGRSHAVRLAQEGADIIAV 41 (286)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCeEEEE
Confidence 345555554433344556677888887765
No 310
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=26.83 E-value=2.7e+02 Score=23.05 Aligned_cols=95 Identities=15% Similarity=0.044 Sum_probs=44.8
Q ss_pred CCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHH---HHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC-----
Q 014603 111 DDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEA---RATHSHLEVRHFDLLPAKGWEVDLDAVEALADE----- 182 (422)
Q Consensus 111 ~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~----- 182 (422)
..+++|.++...=..+.+.|.+.|.+|++..-.-..... .....+.++..+..+- -|.+.+++.++.
T Consensus 13 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~ 87 (256)
T 3gaf_A 13 AVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNV-----TDEQHREAVIKAALDQF 87 (256)
T ss_dssp CEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCC-----CCHHHHHHHHHHHHHHc
Confidence 344555444433334455667778887775433322222 2223455666665443 244555443321
Q ss_pred -CceEEEEeCCCC-CcccccCHHHHHHHHH
Q 014603 183 -NTVALVIINPGN-PCGNVYTYQHLQKIAE 210 (422)
Q Consensus 183 -~~~~i~i~~p~n-ptG~~~~~~~l~~i~~ 210 (422)
+...++.+-... +.....+.+++++..+
T Consensus 88 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~ 117 (256)
T 3gaf_A 88 GKITVLVNNAGGGGPKPFDMPMSDFEWAFK 117 (256)
T ss_dssp SCCCEEEECCCCCCCCCTTCCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCCCCCHHHHHHHHH
Confidence 344444332222 2222456677776654
No 311
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=26.72 E-value=49 Score=31.05 Aligned_cols=28 Identities=18% Similarity=0.431 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHcCcEEEEcccccccc
Q 014603 202 YQHLQKIAETAKKLGIMVIADEVYDHLA 229 (422)
Q Consensus 202 ~~~l~~i~~~~~~~~~~li~D~~~~~~~ 229 (422)
.++++++++.|+++|+-||+|-+.....
T Consensus 97 ~~df~~lv~~~H~~Gi~VilD~V~NH~~ 124 (478)
T 2guy_A 97 ADDLKALSSALHERGMYLMVDVVANHMG 124 (478)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEECcccCC
Confidence 4899999999999999999999986544
No 312
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=26.62 E-value=44 Score=31.50 Aligned_cols=27 Identities=33% Similarity=0.388 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHcCcEEEEccccccc
Q 014603 202 YQHLQKIAETAKKLGIMVIADEVYDHL 228 (422)
Q Consensus 202 ~~~l~~i~~~~~~~~~~li~D~~~~~~ 228 (422)
.++++++++.|+++|+-||.|-+.-..
T Consensus 82 ~~df~~Lv~~aH~~Gi~VilD~V~NH~ 108 (485)
T 1wpc_A 82 RSQLQAAVTSLKNNGIQVYGDVVMNHK 108 (485)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEEecccc
Confidence 399999999999999999999997654
No 313
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=26.60 E-value=41 Score=28.58 Aligned_cols=82 Identities=13% Similarity=0.130 Sum_probs=48.3
Q ss_pred EEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHc
Q 014603 136 NILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKL 215 (422)
Q Consensus 136 ~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~ 215 (422)
.|++....|.+.......... .+.+|+-. .+|-+|+-++.++-.-+..++++. -.+++.++++++.+.|++.
T Consensus 81 SVLTd~~~F~Gs~~~L~~vr~-~v~lPvLr-KDFiid~yQI~eAr~~GADaILLI------~a~L~~~~l~~l~~~A~~l 152 (258)
T 4a29_A 81 SITTEEKYFNGSYETLRKIAS-SVSIPILM-SDFIVKESQIDDAYNLGADTVLLI------VKILTERELESLLEYARSY 152 (258)
T ss_dssp EEECCSTTTCCCHHHHHHHHT-TCSSCEEE-ESCCCSHHHHHHHHHHTCSEEEEE------GGGSCHHHHHHHHHHHHHT
T ss_pred EEeCCCCCCCCCHHHHHHHHH-hcCCCEee-ccccccHHHHHHHHHcCCCeeehH------HhhcCHHHHHHHHHHHHHH
Confidence 566667767654433332211 11223221 457789888877543344444332 2346778999999999999
Q ss_pred CcEEEEccccc
Q 014603 216 GIMVIADEVYD 226 (422)
Q Consensus 216 ~~~li~D~~~~ 226 (422)
|+-+++ |++.
T Consensus 153 Gl~~Lv-EVh~ 162 (258)
T 4a29_A 153 GMEPLI-LIND 162 (258)
T ss_dssp TCCCEE-EESS
T ss_pred hHHHHH-hcch
Confidence 987776 4443
No 314
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=26.42 E-value=53 Score=30.93 Aligned_cols=27 Identities=33% Similarity=0.495 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHHcCcEEEEccccccc
Q 014603 202 YQHLQKIAETAKKLGIMVIADEVYDHL 228 (422)
Q Consensus 202 ~~~l~~i~~~~~~~~~~li~D~~~~~~ 228 (422)
.++++++++.|+++|+.||.|-++-..
T Consensus 81 ~~d~~~Lv~~aH~~Gi~VilD~V~NH~ 107 (488)
T 1wza_A 81 LEDFHKLVEAAHQRGIKVIIDLPINHT 107 (488)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCCSBC
T ss_pred HHHHHHHHHHHHHCCCEEEEEeccccc
Confidence 499999999999999999999997653
No 315
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=26.16 E-value=44 Score=31.92 Aligned_cols=27 Identities=22% Similarity=0.370 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHcCcEEEEccccccc
Q 014603 202 YQHLQKIAETAKKLGIMVIADEVYDHL 228 (422)
Q Consensus 202 ~~~l~~i~~~~~~~~~~li~D~~~~~~ 228 (422)
.++++++++.|+++|+.||.|-++-..
T Consensus 79 ~~dfk~Lv~~aH~~Gi~VilD~V~NHt 105 (549)
T 4aie_A 79 MADMDELISKAKEHHIKIVMDLVVNHT 105 (549)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBC
T ss_pred HHHHHHHHHHHHHCCCEEEEEECccCC
Confidence 389999999999999999999998653
No 316
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=26.07 E-value=57 Score=30.56 Aligned_cols=27 Identities=33% Similarity=0.556 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHHcCcEEEEccccccc
Q 014603 202 YQHLQKIAETAKKLGIMVIADEVYDHL 228 (422)
Q Consensus 202 ~~~l~~i~~~~~~~~~~li~D~~~~~~ 228 (422)
.++++++++.|+++|+-||.|-++...
T Consensus 96 ~~df~~lv~~~h~~Gi~VilD~V~NH~ 122 (475)
T 2z1k_A 96 NEALRHLLEVAHAHGVRVILDGVFNHT 122 (475)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEecccc
Confidence 389999999999999999999987654
No 317
>1wzu_A Quinolinate synthetase A; NAD, biosynthetic protein; 2.00A {Pyrococcus horikoshii} SCOP: c.145.1.1 PDB: 2qs0_A
Probab=25.87 E-value=1.1e+02 Score=26.58 Aligned_cols=87 Identities=11% Similarity=-0.019 Sum_probs=47.6
Q ss_pred CCCEEEecCCCccchHHHHhhCCCeEEEeeccC--CCCcccCHHHHHHhhcCCceEEEEeCCCCCccc------ccCHHH
Q 014603 133 PGANILLPRPGFPYYEARATHSHLEVRHFDLLP--AKGWEVDLDAVEALADENTVALVIINPGNPCGN------VYTYQH 204 (422)
Q Consensus 133 ~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~------~~~~~~ 204 (422)
++++|++..-.+-+.... +..|.++...+-.- ..--.++++.+.+.....+.+.++.+|.-|.-+ +-|
T Consensus 137 ~~~~iif~pD~~Lg~~l~-~~~~k~~i~~~~~g~C~vh~~~t~e~i~~~~~~~P~a~v~~HPEc~~~v~~~aD~vgS--- 212 (300)
T 1wzu_A 137 DSDVVIFGPDKNLAHYVA-KMTGKKIIPVPSKGHCYVHQKFTLDDVERAKKLHPNAKLMIHPECIPEVQEKADIIAS--- 212 (300)
T ss_dssp SCSEEEEESCHHHHHHHH-HHHCCEEEEC-----------CCHHHHHHHHHHCTTCEEEECTTSCHHHHHTCSEECC---
T ss_pred CCCeEEEECChhHHHHHH-HHcCCeEEECCCCCcCCCcccCCHHHHHHHHHHCCCCEEEECCCCCHHHHhhccccCC---
Confidence 567777665555443332 33377766544100 001246889999888888889999999665221 111
Q ss_pred HHHHHHHHHHcCcEEEEcc
Q 014603 205 LQKIAETAKKLGIMVIADE 223 (422)
Q Consensus 205 l~~i~~~~~~~~~~li~D~ 223 (422)
-..|.+.+++..-++|.=|
T Consensus 213 T~~ii~~~~~~~~~iv~TE 231 (300)
T 1wzu_A 213 TGGMIKRACEWDEWVVFTE 231 (300)
T ss_dssp HHHHHHHGGGCSEEEEESC
T ss_pred HHHHHHHHHhCCCEEEEec
Confidence 1455666666554444333
No 318
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=25.84 E-value=2.8e+02 Score=22.86 Aligned_cols=15 Identities=13% Similarity=0.091 Sum_probs=6.9
Q ss_pred HHHHHHHHHHHHcCc
Q 014603 203 QHLQKIAETAKKLGI 217 (422)
Q Consensus 203 ~~l~~i~~~~~~~~~ 217 (422)
++++..++-+++.|+
T Consensus 141 ee~~~~i~~l~~~G~ 155 (225)
T 2pju_A 141 EDARGQINELKANGT 155 (225)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHCCC
Confidence 444444444444443
No 319
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A*
Probab=25.80 E-value=51 Score=30.90 Aligned_cols=28 Identities=14% Similarity=0.389 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHcCcEEEEcccccccc
Q 014603 202 YQHLQKIAETAKKLGIMVIADEVYDHLA 229 (422)
Q Consensus 202 ~~~l~~i~~~~~~~~~~li~D~~~~~~~ 229 (422)
.++++++++.|+++|+.||+|-++-...
T Consensus 74 ~~d~~~lv~~~h~~Gi~VilD~V~NH~~ 101 (471)
T 1jae_A 74 ESAFTDMTRRCNDAGVRIYVDAVINHMT 101 (471)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEeccccc
Confidence 3999999999999999999999986544
No 320
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=25.78 E-value=60 Score=28.47 Aligned_cols=50 Identities=14% Similarity=0.165 Sum_probs=35.5
Q ss_pred HHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHc-CcEEEEccccccc
Q 014603 173 LDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKL-GIMVIADEVYDHL 228 (422)
Q Consensus 173 ~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~-~~~li~D~~~~~~ 228 (422)
.+.+++.++.+.+.+++..+ |. +.++..++.+.|+++ |+.+|-+.+.+..
T Consensus 85 ~~~~~e~i~~Gi~~iv~~t~----G~--~~~~~~~l~~~a~~~~gi~liGPnc~Gii 135 (305)
T 2fp4_A 85 AAAINEAIDAEVPLVVCITE----GI--PQQDMVRVKHRLLRQGKTRLIGPNCPGVI 135 (305)
T ss_dssp HHHHHHHHHTTCSEEEECCC----CC--CHHHHHHHHHHHTTCSSCEEECSSSCEEE
T ss_pred HHHHHHHHHCCCCEEEEECC----CC--ChHHHHHHHHHHHhcCCcEEEeCCCCeEe
Confidence 45566677777777665554 33 335677899999999 9999877776543
No 321
>4exb_A Putative uncharacterized protein; aldo-keto reductase, NADP+ binding, oxidoreducta; 2.75A {Pseudomonas aeruginosa} PDB: 4exa_A
Probab=25.71 E-value=3.2e+02 Score=23.45 Aligned_cols=134 Identities=11% Similarity=0.056 Sum_probs=69.5
Q ss_pred cHHHHHHHHHHhhCCC-----CCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCEEEecC--------------H-H---
Q 014603 64 ASVAVDAIVHSVRSAR-----FNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLG--------------C-T--- 120 (422)
Q Consensus 64 ~~~v~~a~~~~~~~~~-----~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~~~g--------------~-~--- 120 (422)
.+...+++..+++.+. ...|+ .-++.+.+.+.. ..+++++++= + .
T Consensus 69 ~~~~~~~l~~Al~~Gi~~~DTA~~Yg------~sE~~lG~al~~------~R~~v~I~TK~~~~~~~~~~~~~~~~~~i~ 136 (292)
T 4exb_A 69 DREAADLLALARDLGINLIDTAPAYG------RSEERLGPLLRG------QREHWVIVSKVGEEFVDGQSVFDFSAAHTR 136 (292)
T ss_dssp HHHHHHHHHHHHHTTCCEEECCTTST------THHHHHHHHHTT------TGGGCEEEEEESBC--CCSCCBCCCHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEcCCccc------hHHHHHHHHhcc------CCCcEEEEEeeccccCCCCccCCCCHHHHH
Confidence 4567778888877642 12332 456677777753 2345554421 1 1
Q ss_pred HHHHHHHHHhc-CCCCEEEecCCC--cc-----chH---HHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEE
Q 014603 121 QAIEVILTVLA-RPGANILLPRPG--FP-----YYE---ARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVI 189 (422)
Q Consensus 121 ~a~~~~~~~l~-~~gd~Vl~~~~~--~~-----~~~---~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i 189 (422)
.+++..+..|- +.=|-+++..|. .. ... ..++..| .++.+.+.. .+.+.++++++. ..++
T Consensus 137 ~~~e~SL~rLg~dyiDl~llH~p~~d~~~~~~~e~~~al~~l~~~G-kir~iGvSn-----~~~~~l~~~~~~-~~~~-- 207 (292)
T 4exb_A 137 RSVERSLKRLETDRIELVLVHSDGNDLDILENSEVYPTLAALKREG-LIGAYGLSG-----KTVEGGLRALRE-GDCA-- 207 (292)
T ss_dssp HHHHHHHHHTTSSCEEEEEEECCSCHHHHHHHSSHHHHHHHHHHTT-SEEEEEEEC-----SSHHHHHHHHHH-SSEE--
T ss_pred HHHHHHHHHhCCCceeEEEEecCCCCccccchHHHHHHHHHHHHCC-CceEEEeCC-----CCHHHHHHHHHh-hcEE--
Confidence 23333333331 222677777772 21 111 1222233 677777642 466777776553 2222
Q ss_pred eCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcc
Q 014603 190 INPGNPCGNVYTYQHLQKIAETAKKLGIMVIADE 223 (422)
Q Consensus 190 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~ 223 (422)
-.+.||.-.. . .++.+.|+++|+.++.=.
T Consensus 208 Q~~~~~~~~~----~-~~l~~~~~~~gi~v~a~s 236 (292)
T 4exb_A 208 MVTYNLNERA----E-RPVIEYAAAHAKGILVKK 236 (292)
T ss_dssp EEECSSSCCT----T-HHHHHHHHHTTCEEEEEC
T ss_pred eeccccccCC----H-HHHHHHHHHCCcEEEEec
Confidence 2233333222 2 678899999999887433
No 322
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A
Probab=25.61 E-value=53 Score=30.28 Aligned_cols=28 Identities=32% Similarity=0.538 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHcCcEEEEcccccccc
Q 014603 202 YQHLQKIAETAKKLGIMVIADEVYDHLA 229 (422)
Q Consensus 202 ~~~l~~i~~~~~~~~~~li~D~~~~~~~ 229 (422)
.++++++++.|+++|+-||.|-++....
T Consensus 74 ~~d~~~lv~~~h~~Gi~VilD~V~NH~~ 101 (422)
T 1ua7_A 74 EQEFKEMCAAAEEYGIKVIVDAVINHTT 101 (422)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEECCSBCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEeccCccc
Confidence 4999999999999999999999987644
No 323
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=25.60 E-value=2.5e+02 Score=22.87 Aligned_cols=88 Identities=9% Similarity=0.065 Sum_probs=44.4
Q ss_pred EEecCHHHHHHHHHHHhcCC--CCEE--EecCCCccchHHHHhhCCCeEEEeeccCCC-CcccCHHHHHHhhc-CCceEE
Q 014603 114 YLTLGCTQAIEVILTVLARP--GANI--LLPRPGFPYYEARATHSHLEVRHFDLLPAK-GWEVDLDAVEALAD-ENTVAL 187 (422)
Q Consensus 114 ~~~~g~~~a~~~~~~~l~~~--gd~V--l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~d~~~l~~~~~-~~~~~i 187 (422)
++.+|....+..++.++... +-+| ++.++.-......++..|+++..++...-. ....+ +++.+.+. .++.++
T Consensus 5 vl~Sg~gsnl~ali~~~~~~~~~~~i~~Vis~~~~~~~~~~A~~~gIp~~~~~~~~~~~r~~~~-~~~~~~l~~~~~Dli 83 (212)
T 1jkx_A 5 VLISGNGSNLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQAGIATHTLIASAFDSREAYD-RELIHEIDMYAPDVV 83 (212)
T ss_dssp EEESSCCHHHHHHHHHHHTTSSSSEEEEEEESCTTCHHHHHHHHTTCEEEECCGGGCSSHHHHH-HHHHHHHGGGCCSEE
T ss_pred EEEECCcHHHHHHHHHHHcCCCCceEEEEEeCCCchHHHHHHHHcCCcEEEeCcccccchhhcc-HHHHHHHHhcCCCEE
Confidence 45555445677777776443 1222 334433333467788889887765421110 00112 22333333 356666
Q ss_pred EEeCCCCCcccccCHHHHH
Q 014603 188 VIINPGNPCGNVYTYQHLQ 206 (422)
Q Consensus 188 ~i~~p~nptG~~~~~~~l~ 206 (422)
++.. .|.++|.+-+.
T Consensus 84 v~ag----y~~il~~~~l~ 98 (212)
T 1jkx_A 84 VLAG----FMRILSPAFVS 98 (212)
T ss_dssp EESS----CCSCCCHHHHH
T ss_pred EEeC----hhhhCCHHHHh
Confidence 6543 56677755554
No 324
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=25.59 E-value=2.7e+02 Score=23.37 Aligned_cols=30 Identities=17% Similarity=0.138 Sum_probs=17.5
Q ss_pred CCEEEecCHHHHHHHHHHHhcCCCCEEEec
Q 014603 111 DDVYLTLGCTQAIEVILTVLARPGANILLP 140 (422)
Q Consensus 111 ~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~ 140 (422)
..+++|.++...=..+...|.+.|.+|++.
T Consensus 12 k~~lVTGas~GIG~a~a~~la~~G~~V~~~ 41 (277)
T 3tsc_A 12 RVAFITGAARGQGRAHAVRMAAEGADIIAV 41 (277)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCccHHHHHHHHHHHHcCCEEEEE
Confidence 345555444433344556677788887765
No 325
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=25.55 E-value=2.2e+02 Score=23.96 Aligned_cols=31 Identities=19% Similarity=0.149 Sum_probs=17.8
Q ss_pred CCEEEecCHHHHHHHHHHHhcCCCCEEEecC
Q 014603 111 DDVYLTLGCTQAIEVILTVLARPGANILLPR 141 (422)
Q Consensus 111 ~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~ 141 (422)
..+++|.++...=..+...|.+.|.+|++..
T Consensus 14 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~ 44 (278)
T 3sx2_A 14 KVAFITGAARGQGRAHAVRLAADGADIIAVD 44 (278)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCeEEEEe
Confidence 3455555444333444556777888877653
No 326
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1
Probab=25.43 E-value=56 Score=30.75 Aligned_cols=27 Identities=22% Similarity=0.520 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHcCcEEEEcccccccc
Q 014603 203 QHLQKIAETAKKLGIMVIADEVYDHLA 229 (422)
Q Consensus 203 ~~l~~i~~~~~~~~~~li~D~~~~~~~ 229 (422)
++++++++.|+++|+-||.|-++....
T Consensus 98 ~df~~lv~~~H~~Gi~VilD~V~NH~~ 124 (484)
T 2aaa_A 98 DNLKSLSDALHARGMYLMVDVVPDHMG 124 (484)
T ss_dssp HHHHHHHHHHHTTTCEEEEEECCSBCC
T ss_pred HHHHHHHHHHHHCCCEEEEEECcCCcC
Confidence 899999999999999999999987544
No 327
>2vt1_B Surface presentation of antigens protein SPAS; specificity switch, virulence, transmembrane, inner membrane, FLHB, YSCU, T3SS, plasmid; 2.00A {Shigella flexneri} SCOP: d.367.1.1
Probab=25.38 E-value=40 Score=23.57 Aligned_cols=24 Identities=21% Similarity=0.248 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHcCcEEEEccccc
Q 014603 203 QHLQKIAETAKKLGIMVIADEVYD 226 (422)
Q Consensus 203 ~~l~~i~~~~~~~~~~li~D~~~~ 226 (422)
.--.+|.++++++|+.++.|..-.
T Consensus 27 ~~A~~I~e~A~e~gVPi~e~~~LA 50 (93)
T 2vt1_B 27 QCALAVRKYANEVGIPTVRDVKLA 50 (93)
T ss_dssp HHHHHHHHHHHHTTCCEEECHHHH
T ss_pred HHHHHHHHHHHHcCCCEEECHHHH
Confidence 346788999999999999997644
No 328
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A*
Probab=25.33 E-value=1.6e+02 Score=28.33 Aligned_cols=78 Identities=13% Similarity=0.095 Sum_probs=44.4
Q ss_pred CCCCEEEecCCCccchH-------HHHhhCCCeEEEeeccC-CCCcccCHHHHHHhhcC-CceEEEEeCCCCCcccccCH
Q 014603 132 RPGANILLPRPGFPYYE-------ARATHSHLEVRHFDLLP-AKGWEVDLDAVEALADE-NTVALVIINPGNPCGNVYTY 202 (422)
Q Consensus 132 ~~gd~Vl~~~~~~~~~~-------~~~~~~g~~~~~~~~~~-~~~~~~d~~~l~~~~~~-~~~~i~i~~p~nptG~~~~~ 202 (422)
+++|.|++.....++.. ......|++++...... .-....|.++|...++. +++-++.++.. .
T Consensus 337 ~~~~~vi~s~~~~~G~~~~~~~~~~~l~~~g~~v~~~~~~~i~~SgHa~~~eL~~~i~~~~Pk~vipvHGe-----~--- 408 (562)
T 3bk2_A 337 KPGDTVILSSSPIPGNEEAVNRVINRLYALGAYVLYPPTYKVHASGHASQEELKLILNLTTPRFFLPWHGE-----V--- 408 (562)
T ss_dssp CTTCEEEECSCCCTTCHHHHHHHHHHHHHTTCEEECTTTSSSCCCSSCCHHHHHHHHHHHCCSEEEEESBC-----H---
T ss_pred CCCCEEEEECCCCCCCeEehhhhcCceeeCCCEEEEccCCceEEeCCCCHHHHHHHHHhcCCCEEEEEcCC-----H---
Confidence 68899999887776652 23345677765432100 01123466777665432 45666665532 2
Q ss_pred HHHHHHHHHHHHcCc
Q 014603 203 QHLQKIAETAKKLGI 217 (422)
Q Consensus 203 ~~l~~i~~~~~~~~~ 217 (422)
..+.+.++++++.|+
T Consensus 409 ~~~~~~~~~~~~~g~ 423 (562)
T 3bk2_A 409 RHQMNFKWLAESMSR 423 (562)
T ss_dssp HHHHHHHHHHHTSSS
T ss_pred HHHHHHHHHHHHcCC
Confidence 456677777777664
No 329
>2al1_A Enolase 1, 2-phospho-D-; beta barrel, lyase; HET: PEP 2PG; 1.50A {Saccharomyces cerevisiae} SCOP: c.1.11.1 d.54.1.1 PDB: 1ebg_A 1ebh_A* 1one_A* 2one_A* 1p48_A* 1p43_A* 1l8p_A 4enl_A 1nel_A 1els_A 3enl_A 5enl_A* 6enl_A 7enl_A* 2al2_A* 2al2_B* 2xh7_A* 2xgz_A* 2xh2_A* 2xh4_A* ...
Probab=25.28 E-value=67 Score=29.83 Aligned_cols=92 Identities=8% Similarity=0.096 Sum_probs=54.0
Q ss_pred HHHHHHHHHHhcCCCCEEEecCCCccc----hHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCC
Q 014603 120 TQAIEVILTVLARPGANILLPRPGFPY----YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNP 195 (422)
Q Consensus 120 ~~a~~~~~~~l~~~gd~Vl~~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~np 195 (422)
.+++..+...+ .+-+-+++++|.... +....+... +|+--++.+..++..+.+.+..+..=++...++.
T Consensus 276 ~eai~~~~~~l-~~y~i~~iEdPl~~dD~~g~~~l~~~~~-----ipI~gDE~~vt~~~~~~~~i~~~a~d~i~ikv~q- 348 (436)
T 2al1_A 276 PQLADLYHSLM-KRYPIVSIEDPFAEDDWEAWSHFFKTAG-----IQIVADDLTVTNPKRIATAIEKKAADALLLKVNQ- 348 (436)
T ss_dssp HHHHHHHHHHH-HHSCEEEEECCSCTTCHHHHHHHHTTCC-----SEEEESTTTTTCHHHHHHHHHTTCCSEEEECHHH-
T ss_pred HHHHHHHHHHH-HhCCcEEEECCCCCcCHHHHHHHHhcCC-----CeEEECCcccCCHHHHHHHHHhCCCCEEEechhh-
Confidence 44554433333 344688999987643 333333322 2322222222478889888876654455555555
Q ss_pred cccccCHHHHHHHHHHHHHcCcEEEE
Q 014603 196 CGNVYTYQHLQKIAETAKKLGIMVIA 221 (422)
Q Consensus 196 tG~~~~~~~l~~i~~~~~~~~~~li~ 221 (422)
.|.+ .+..+++++|+.+|+.+++
T Consensus 349 iGGi---tea~~ia~lA~~~g~~~~~ 371 (436)
T 2al1_A 349 IGTL---SESIKAAQDSFAAGWGVMV 371 (436)
T ss_dssp HCCH---HHHHHHHHHHHHTTCEEEE
T ss_pred cCCH---HHHHHHHHHHHHcCCeEEE
Confidence 4444 4788999999999997754
No 330
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=25.26 E-value=2.9e+02 Score=22.79 Aligned_cols=93 Identities=10% Similarity=-0.014 Sum_probs=42.7
Q ss_pred CEEEecCHHHHHH-HHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC------Cc
Q 014603 112 DVYLTLGCTQAIE-VILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE------NT 184 (422)
Q Consensus 112 ~i~~~~g~~~a~~-~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~ 184 (422)
.+++| |++..+- .+...|.+.|.+|++..-.-..........+.++..+..+- -|.+.+++.++. +.
T Consensus 8 ~vlVT-Gas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~g~i 81 (253)
T 1hxh_A 8 VALVT-GGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDV-----SSEADWTLVMAAVQRRLGTL 81 (253)
T ss_dssp EEEET-TTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCT-----TCHHHHHHHHHHHHHHHCSC
T ss_pred EEEEe-CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccC-----CCHHHHHHHHHHHHHHcCCC
Confidence 34444 4444444 34556667788877754332222222222244455554432 245555544321 23
Q ss_pred eEEEEeCCCCCccc--ccCHHHHHHHHH
Q 014603 185 VALVIINPGNPCGN--VYTYQHLQKIAE 210 (422)
Q Consensus 185 ~~i~i~~p~nptG~--~~~~~~l~~i~~ 210 (422)
..++-+....+.+. ..+.+++++..+
T Consensus 82 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 109 (253)
T 1hxh_A 82 NVLVNNAGILLPGDMETGRLEDFSRLLK 109 (253)
T ss_dssp CEEEECCCCCCCBCTTTCCHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 44443332222221 245566766555
No 331
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=25.23 E-value=1.3e+02 Score=26.21 Aligned_cols=53 Identities=19% Similarity=0.103 Sum_probs=35.7
Q ss_pred CcccCHHHHHHhh----cCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHc----CcEEEE
Q 014603 168 GWEVDLDAVEALA----DENTVALVIINPGNPCGNVYTYQHLQKIAETAKKL----GIMVIA 221 (422)
Q Consensus 168 ~~~~d~~~l~~~~----~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~----~~~li~ 221 (422)
+..+|.+.+++.+ +.+...++ ...++.-+..++.++..++++.+.+. ++.||+
T Consensus 22 dg~iD~~~l~~lv~~li~~Gv~gl~-v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpvia 82 (301)
T 3m5v_A 22 NGKVDEQSYARLIKRQIENGIDAVV-PVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLA 82 (301)
T ss_dssp TTEECHHHHHHHHHHHHHTTCCEEE-CSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEE
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEE-ECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEE
Confidence 4568888887654 44566654 44455555678889999988887764 466665
No 332
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=25.20 E-value=59 Score=30.04 Aligned_cols=28 Identities=25% Similarity=0.246 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHcCcEEEEcccccccc
Q 014603 202 YQHLQKIAETAKKLGIMVIADEVYDHLA 229 (422)
Q Consensus 202 ~~~l~~i~~~~~~~~~~li~D~~~~~~~ 229 (422)
.++++++++.|+++|+-||.|-++....
T Consensus 81 ~~d~~~lv~~ah~~Gi~vilD~V~NH~s 108 (424)
T 2dh2_A 81 KEDFDSLLQSAKKKSIRVILDLTPNYRG 108 (424)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCTTTTS
T ss_pred HHHHHHHHHHHHHCCCEEEEEECCCcCC
Confidence 3999999999999999999999987543
No 333
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=25.09 E-value=2.5e+02 Score=23.56 Aligned_cols=96 Identities=16% Similarity=-0.056 Sum_probs=44.9
Q ss_pred CCEEEecCHHHHHHHHHHHhcCCCCEEEecCC-Cccc---hHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC----
Q 014603 111 DDVYLTLGCTQAIEVILTVLARPGANILLPRP-GFPY---YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE---- 182 (422)
Q Consensus 111 ~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~-~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~---- 182 (422)
..+++|.++...=..+...|.+.|.+|++..- .-.. ........+.++..+..+- -|.+.+++.++.
T Consensus 29 k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~d~~~v~~~~~~~~~~ 103 (269)
T 4dmm_A 29 RIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADV-----SQESEVEALFAAVIER 103 (269)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCT-----TSHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCC-----CCHHHHHHHHHHHHHH
Confidence 34455544443333445567778888776432 1111 1222233455666665433 244555444321
Q ss_pred --CceEEEEeCCCCCcc--cccCHHHHHHHHHH
Q 014603 183 --NTVALVIINPGNPCG--NVYTYQHLQKIAET 211 (422)
Q Consensus 183 --~~~~i~i~~p~nptG--~~~~~~~l~~i~~~ 211 (422)
+...++.+....+.+ ...+.++++++.++
T Consensus 104 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~v 136 (269)
T 4dmm_A 104 WGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDL 136 (269)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 344444333222222 23466777766553
No 334
>3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, STRU genomics, protein structure initiative; 2.07A {Escherichia coli}
Probab=24.93 E-value=85 Score=29.55 Aligned_cols=73 Identities=8% Similarity=0.175 Sum_probs=44.3
Q ss_pred CCCccchHHHHhhC-CCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEE
Q 014603 141 RPGFPYYEARATHS-HLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMV 219 (422)
Q Consensus 141 ~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~l 219 (422)
-|.|..|......- ..+...+-+.+ ..-++.+++..+.+.+ +++.....+ .++.+++.++|+++|+.+
T Consensus 21 ~Pv~~~~~~~~~~p~~~DlavI~vPa----~~v~~~v~e~~~~Gv~-~viis~Gf~------~~~~~~l~~~A~~~g~rl 89 (480)
T 3dmy_A 21 LTQVRRWDSACQKLPDANLALISVAG----EYAAELANQALDRNLN-VMMFSDNVT------LEDEIQLKTRAREKGLLV 89 (480)
T ss_dssp CEEESSHHHHHHHSTTCCEEEECSCH----HHHHHHHHHHHHTTCE-EEECCCCCC------HHHHHHHHHHHHHTTCCE
T ss_pred CcccchHHHHHhcCCCCCEEEEecCH----HHHHHHHHHHHhcCCC-EEEECCCCC------HHHHHHHHHHHHHcCCEE
Confidence 45566666665553 34443333211 1345677787777888 444333322 467789999999999988
Q ss_pred EEccc
Q 014603 220 IADEV 224 (422)
Q Consensus 220 i~D~~ 224 (422)
+==.+
T Consensus 90 iGPNc 94 (480)
T 3dmy_A 90 MGPDC 94 (480)
T ss_dssp ECSSC
T ss_pred EecCc
Confidence 84443
No 335
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=24.78 E-value=3e+02 Score=22.91 Aligned_cols=92 Identities=15% Similarity=0.149 Sum_probs=47.2
Q ss_pred CEEEecCHHHHHHH-HHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC--CceEEE
Q 014603 112 DVYLTLGCTQAIEV-ILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE--NTVALV 188 (422)
Q Consensus 112 ~i~~~~g~~~a~~~-~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~--~~~~i~ 188 (422)
.+++.+|++.+|-. +...|.+.|-+|++.+-.-... ....+..+..+..+- -|.+.+++.+++ +.. ++
T Consensus 12 K~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~---~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~g~iD-iL 82 (242)
T 4b79_A 12 QQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGV---HAPRHPRIRREELDI-----TDSQRLQRLFEALPRLD-VL 82 (242)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTST---TSCCCTTEEEEECCT-----TCHHHHHHHHHHCSCCS-EE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH---hhhhcCCeEEEEecC-----CCHHHHHHHHHhcCCCC-EE
Confidence 45554555555544 4556778898887754322111 112333455554432 245666665543 233 33
Q ss_pred EeCC-CCCcccccCHHHHHHHHHHH
Q 014603 189 IINP-GNPCGNVYTYQHLQKIAETA 212 (422)
Q Consensus 189 i~~p-~nptG~~~~~~~l~~i~~~~ 212 (422)
+.|. .+.....++.++|+++.++-
T Consensus 83 VNNAGi~~~~~~~~~~~w~~~~~vN 107 (242)
T 4b79_A 83 VNNAGISRDREEYDLATFERVLRLN 107 (242)
T ss_dssp EECCCCCCGGGGGSHHHHHHHHHHH
T ss_pred EECCCCCCCcccCCHHHHHHHHHHh
Confidence 4444 23333456778888777643
No 336
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=24.76 E-value=2.9e+02 Score=22.59 Aligned_cols=95 Identities=14% Similarity=0.031 Sum_probs=44.6
Q ss_pred CCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchH---HHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC-----
Q 014603 111 DDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYE---ARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE----- 182 (422)
Q Consensus 111 ~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~----- 182 (422)
..+++|.++...=..+.+.|.+.|.+|++..-.-.... ...+..+.++..+..+- -|.+.+++.++.
T Consensus 6 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~ 80 (247)
T 3lyl_A 6 KVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNI-----SDIESIQNFFAEIKAEN 80 (247)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHHHHHTT
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecC-----CCHHHHHHHHHHHHHHc
Confidence 34555554443333445566777888776543332222 22223355666665543 244555443321
Q ss_pred -CceEEEEeCCCCCccc--ccCHHHHHHHHH
Q 014603 183 -NTVALVIINPGNPCGN--VYTYQHLQKIAE 210 (422)
Q Consensus 183 -~~~~i~i~~p~nptG~--~~~~~~l~~i~~ 210 (422)
+...++.+....+.+. ..+.+++++..+
T Consensus 81 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 111 (247)
T 3lyl_A 81 LAIDILVNNAGITRDNLMMRMSEDEWQSVIN 111 (247)
T ss_dssp CCCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCchhhCCHHHHHHHHH
Confidence 2344443333222222 345666666555
No 337
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=24.57 E-value=3e+02 Score=22.78 Aligned_cols=31 Identities=19% Similarity=0.257 Sum_probs=17.6
Q ss_pred CCEEEecCHHHHHHHHHHHhcCCCCEEEecC
Q 014603 111 DDVYLTLGCTQAIEVILTVLARPGANILLPR 141 (422)
Q Consensus 111 ~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~ 141 (422)
..+++|.++...=..+...|.+.|.+|++..
T Consensus 13 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~ 43 (263)
T 3ak4_A 13 RKAIVTGGSKGIGAAIARALDKAGATVAIAD 43 (263)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEe
Confidence 3455554443333344556677888877653
No 338
>3t7y_A YOP proteins translocation protein U; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta; 2.10A {Chlamydia trachomatis} SCOP: d.367.1.0
Probab=24.56 E-value=39 Score=23.83 Aligned_cols=24 Identities=17% Similarity=0.313 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHcCcEEEEccccc
Q 014603 203 QHLQKIAETAKKLGIMVIADEVYD 226 (422)
Q Consensus 203 ~~l~~i~~~~~~~~~~li~D~~~~ 226 (422)
.--.+|.++++++|+.++.|..-.
T Consensus 42 ~~A~~I~~~A~e~gVPi~e~~~LA 65 (97)
T 3t7y_A 42 LRAKRIIAEAEKYGVPIMRNVPLA 65 (97)
T ss_dssp HHHHHHHHHHHHHTCCEEECHHHH
T ss_pred HHHHHHHHHHHHcCCeEEECHHHH
Confidence 346788999999999999998744
No 339
>3ozo_A N-acetylglucosaminidase; beta-N-acetyl-D-hexosaminidase, hydrolase-hydrolase inhibito; HET: NGT; 2.00A {Ostrinia furnacalis} PDB: 3nsn_A* 3nsm_A* 3ozp_A* 3s6t_A* 3vtr_A*
Probab=24.54 E-value=88 Score=30.20 Aligned_cols=24 Identities=21% Similarity=0.403 Sum_probs=22.1
Q ss_pred ccccCHHHHHHHHHHHHHcCcEEE
Q 014603 197 GNVYTYQHLQKIAETAKKLGIMVI 220 (422)
Q Consensus 197 G~~~~~~~l~~i~~~~~~~~~~li 220 (422)
+..|+.+++++|++.|+++|+-||
T Consensus 250 ~~~YT~~di~eiv~yA~~rgI~VI 273 (572)
T 3ozo_A 250 QKVYTKAAIREVVRFGLERGVRVL 273 (572)
T ss_dssp SSCBCHHHHHHHHHHHHHTTCEEE
T ss_pred CCCcCHHHHHHHHHHHHHhCCcee
Confidence 567999999999999999999888
No 340
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=24.39 E-value=3.2e+02 Score=22.96 Aligned_cols=95 Identities=9% Similarity=-0.019 Sum_probs=49.8
Q ss_pred CEEEecCHHHHHHHH-HHHhcCCCCEEEecCCCccchH---HHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC-----
Q 014603 112 DVYLTLGCTQAIEVI-LTVLARPGANILLPRPGFPYYE---ARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE----- 182 (422)
Q Consensus 112 ~i~~~~g~~~a~~~~-~~~l~~~gd~Vl~~~~~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~----- 182 (422)
.+++.+|++.+|-.. ...|.+.|-+|++.+-.-.... ...+..|.++..+..+-. |.+++++.++.
T Consensus 8 KvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt-----~~~~v~~~~~~~~~~~ 82 (254)
T 4fn4_A 8 KVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVS-----KKKDVEEFVRRTFETY 82 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT-----SHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCC-----CHHHHHHHHHHHHHHc
Confidence 455445555555444 4567778888877543332222 223345667776665432 44555543321
Q ss_pred -CceEEEEeCC--CCCcc--cccCHHHHHHHHHHH
Q 014603 183 -NTVALVIINP--GNPCG--NVYTYQHLQKIAETA 212 (422)
Q Consensus 183 -~~~~i~i~~p--~nptG--~~~~~~~l~~i~~~~ 212 (422)
+.. +++.|. ..+.+ .-++.++|+++.++-
T Consensus 83 G~iD-iLVNNAGi~~~~~~~~~~~~e~~~~~~~vN 116 (254)
T 4fn4_A 83 SRID-VLCNNAGIMDGVTPVAEVSDELWERVLAVN 116 (254)
T ss_dssp SCCC-EEEECCCCCCTTCCGGGCCHHHHHHHHHHH
T ss_pred CCCC-EEEECCcccCCCCChhhCCHHHHHHHHHHH
Confidence 233 344554 22333 236778888877753
No 341
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=23.99 E-value=3.2e+02 Score=23.58 Aligned_cols=30 Identities=20% Similarity=0.265 Sum_probs=17.7
Q ss_pred CEEEecCHHHHHHH-HHHHhcCCCCEEEecC
Q 014603 112 DVYLTLGCTQAIEV-ILTVLARPGANILLPR 141 (422)
Q Consensus 112 ~i~~~~g~~~a~~~-~~~~l~~~gd~Vl~~~ 141 (422)
.+++.+|++..+-. +...|.+.|.+|++..
T Consensus 28 k~vlVTGas~GIG~aia~~la~~G~~Vv~~~ 58 (322)
T 3qlj_A 28 RVVIVTGAGGGIGRAHALAFAAEGARVVVND 58 (322)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 34444455455544 4556777888887754
No 342
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=23.95 E-value=65 Score=31.24 Aligned_cols=28 Identities=25% Similarity=0.520 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHcCcEEEEcccccccc
Q 014603 202 YQHLQKIAETAKKLGIMVIADEVYDHLA 229 (422)
Q Consensus 202 ~~~l~~i~~~~~~~~~~li~D~~~~~~~ 229 (422)
.++++++++.|+++|+-||.|-++....
T Consensus 222 ~~df~~lv~~~H~~Gi~VilD~V~NH~~ 249 (588)
T 1j0h_A 222 KETLKTLIDRCHEKGIRVMLDAVFNHCG 249 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEECcCcCc
Confidence 4899999999999999999999987543
No 343
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=23.92 E-value=2.2e+02 Score=24.48 Aligned_cols=24 Identities=17% Similarity=0.128 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHcCcE---EEEcccc
Q 014603 202 YQHLQKIAETAKKLGIM---VIADEVY 225 (422)
Q Consensus 202 ~~~l~~i~~~~~~~~~~---li~D~~~ 225 (422)
.+.+.+.++.|.++|+. ||+|--.
T Consensus 154 ~~~l~~~i~~a~~~Gi~~~~IilDPg~ 180 (280)
T 1eye_A 154 RADLLASVADAVAAGVDPARLVLDPGL 180 (280)
T ss_dssp HHHHHHHHHHHHHTTCCGGGEEEECCT
T ss_pred HHHHHHHHHHHHHcCCChhhEEEECCC
Confidence 46788899999999997 9999743
No 344
>3pff_A ATP-citrate synthase; phosphohistidine, organic acid, ATP-grAsp, lyase, transferas; HET: TLA ADP; 2.30A {Homo sapiens}
Probab=23.91 E-value=1.5e+02 Score=30.17 Aligned_cols=76 Identities=16% Similarity=0.166 Sum_probs=46.9
Q ss_pred CCCccchHHHHhhC-CCeEEEeeccCCCCcccCHHHHHHhhc-CCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcE
Q 014603 141 RPGFPYYEARATHS-HLEVRHFDLLPAKGWEVDLDAVEALAD-ENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIM 218 (422)
Q Consensus 141 ~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~ 218 (422)
-|+|.......... +.++..+-+.+. .-++.+++..+ .+.+.+++.....| ..+.+++.++|+++|+.
T Consensus 550 vp~y~sv~ea~~~~p~~DlaVI~vP~~----~v~~av~ea~~~~Gvk~~Viis~Gf~------e~~~~~l~~~A~~~g~r 619 (829)
T 3pff_A 550 IPVFKNMADAMRKHPEVDVLINFASLR----SAYDSTMETMNYAQIRTIAIIAEGIP------EALTRKLIKKADQKGVT 619 (829)
T ss_dssp EEEESSHHHHHHHCTTCCEEEECCCTT----THHHHHHHHTTSTTCCEEEECCSCCC------HHHHHHHHHHHHHHTCE
T ss_pred cccCCcHHHHhhccCCCcEEEEeCCHH----HHHHHHHHHHhhCCCCEEEEeCCCCC------HHHHHHHHHHHHHcCCE
Confidence 35666655554442 344433332221 35677888888 78887766554333 24568899999999999
Q ss_pred EEEccccc
Q 014603 219 VIADEVYD 226 (422)
Q Consensus 219 li~D~~~~ 226 (422)
||==.+.+
T Consensus 620 liGPNc~G 627 (829)
T 3pff_A 620 IIGPATVG 627 (829)
T ss_dssp EECSSCCC
T ss_pred EEcCCCcc
Confidence 88544443
No 345
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=23.74 E-value=83 Score=30.15 Aligned_cols=49 Identities=14% Similarity=0.119 Sum_probs=34.6
Q ss_pred HHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcc
Q 014603 173 LDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADE 223 (422)
Q Consensus 173 ~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~ 223 (422)
.+.++++++.+...+-+=..+.+....+ +..+++.++|++||+.+|+++
T Consensus 28 ~~~ve~al~~Gv~~vQlR~K~~~~~~~~--~~a~~l~~l~~~~~v~liIND 76 (540)
T 3nl6_A 28 YGQVEAGLQNGVTLVQIREKDADTKFFI--EEALQIKELCHAHNVPLIIND 76 (540)
T ss_dssp HHHHHHHHHTTCSEEEECCSSSCTTHHH--HHHHHHHHHHHHTTCCEEECS
T ss_pred HHHHHHHHHCCCCEEEEecCCCCHHHHH--HHHHHHHHHHHhcCCEEEEeC
Confidence 3566777777777776666654444332 567888899999999888866
No 346
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=23.63 E-value=56 Score=30.35 Aligned_cols=28 Identities=29% Similarity=0.608 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHcCcEEEEcccccccc
Q 014603 202 YQHLQKIAETAKKLGIMVIADEVYDHLA 229 (422)
Q Consensus 202 ~~~l~~i~~~~~~~~~~li~D~~~~~~~ 229 (422)
.++++++++.|+++|+.||+|-+.....
T Consensus 83 ~~~~~~lv~~~h~~Gi~vi~D~V~NH~~ 110 (449)
T 3dhu_A 83 LADFKALTDRAHELGMKVMLDIVYNHTS 110 (449)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEccCcCc
Confidence 4899999999999999999999976543
No 347
>2ya1_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; HET: BGC GLC; 2.25A {Streptococcus pneumoniae}
Probab=23.63 E-value=48 Score=34.69 Aligned_cols=27 Identities=26% Similarity=0.455 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHHcCcEEEEccccccc
Q 014603 202 YQHLQKIAETAKKLGIMVIADEVYDHL 228 (422)
Q Consensus 202 ~~~l~~i~~~~~~~~~~li~D~~~~~~ 228 (422)
.++++++++.|+++|+-||.|-++...
T Consensus 561 ~~efk~lV~~~H~~GI~VIlDvV~NHt 587 (1014)
T 2ya1_A 561 IAEFKNLINEIHKRGMGAILDVVYNHT 587 (1014)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEECTTCC
T ss_pred HHHHHHHHHHHHHcCCEEEEEEecccc
Confidence 589999999999999999999998654
No 348
>3c01_E Surface presentation of antigens protein SPAS; auto cleavage protein, flagella, ESCU, YSCU, intein, T3SS, M inner membrane, transmembrane; 2.60A {Salmonella typhimurium} SCOP: d.367.1.1
Probab=23.61 E-value=42 Score=23.73 Aligned_cols=24 Identities=29% Similarity=0.336 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHcCcEEEEccccc
Q 014603 203 QHLQKIAETAKKLGIMVIADEVYD 226 (422)
Q Consensus 203 ~~l~~i~~~~~~~~~~li~D~~~~ 226 (422)
.--.+|.++++++|+.++.|..-.
T Consensus 27 ~~A~~I~e~A~e~gVPi~e~~~LA 50 (98)
T 3c01_E 27 QRALAVRAYAEKVGVPVIVDIKLA 50 (98)
T ss_dssp HHHHHHHHHHHHHTCCEEECHHHH
T ss_pred HHHHHHHHHHHHcCCCeecCHHHH
Confidence 346788999999999999997644
No 349
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A
Probab=23.54 E-value=56 Score=30.76 Aligned_cols=26 Identities=23% Similarity=0.508 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHcCcEEEEccccccc
Q 014603 203 QHLQKIAETAKKLGIMVIADEVYDHL 228 (422)
Q Consensus 203 ~~l~~i~~~~~~~~~~li~D~~~~~~ 228 (422)
++++++++.|+++|+.||.|-++...
T Consensus 103 ~df~~Lv~~aH~~Gi~VilD~V~NH~ 128 (488)
T 2wc7_A 103 EAFKELLDAAHQRNIKVVLDGVFNHS 128 (488)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECCSBC
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCCcC
Confidence 89999999999999999999987653
No 350
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*
Probab=23.52 E-value=2.4e+02 Score=24.87 Aligned_cols=34 Identities=32% Similarity=0.343 Sum_probs=28.3
Q ss_pred CCCcccccCHHHHHHHHHHHHHcCcEEEEccccc
Q 014603 193 GNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYD 226 (422)
Q Consensus 193 ~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~ 226 (422)
.+|.|-....+++.++++.|+++|+.|++|--|+
T Consensus 50 ~~P~~g~~~~~~~~~~~~~A~~~GlkV~ld~Hys 83 (332)
T 1hjs_A 50 VNPADGNYNLDYNIAIAKRAKAAGLGVYIDFHYS 83 (332)
T ss_dssp SSCTTCTTSHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred eCCCCCcCCHHHHHHHHHHHHHCCCEEEEEeccC
Confidence 5677777777899999999999999999995443
No 351
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=23.40 E-value=3.3e+02 Score=22.76 Aligned_cols=96 Identities=15% Similarity=0.107 Sum_probs=44.0
Q ss_pred CCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHH----hhCCCeEEEeeccCCCCcccCHHHHHHhhcC----
Q 014603 111 DDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARA----THSHLEVRHFDLLPAKGWEVDLDAVEALADE---- 182 (422)
Q Consensus 111 ~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~---- 182 (422)
..+++|.++...=..+...|.+.|.+|++..-.-....... ...+.++..+..+- -|.+.+++.++.
T Consensus 22 k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl-----~~~~~v~~~~~~~~~~ 96 (267)
T 1vl8_A 22 RVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDV-----SNYEEVKKLLEAVKEK 96 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCC-----CCHHHHHHHHHHHHHH
Confidence 34555544433333445567778877776543222112111 12255555555432 245555544331
Q ss_pred --CceEEEEeCCCCCcc--cccCHHHHHHHHHH
Q 014603 183 --NTVALVIINPGNPCG--NVYTYQHLQKIAET 211 (422)
Q Consensus 183 --~~~~i~i~~p~nptG--~~~~~~~l~~i~~~ 211 (422)
+..+++.+......+ .-.+.++++++.++
T Consensus 97 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 129 (267)
T 1vl8_A 97 FGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEV 129 (267)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHH
Confidence 344444333222222 12456777766553
No 352
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=23.10 E-value=3.5e+02 Score=23.07 Aligned_cols=95 Identities=18% Similarity=0.102 Sum_probs=44.9
Q ss_pred CCEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHH---HhhCCCeEEEeeccCCCCcccCHHHHHHhhcC-----
Q 014603 111 DDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEAR---ATHSHLEVRHFDLLPAKGWEVDLDAVEALADE----- 182 (422)
Q Consensus 111 ~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~----- 182 (422)
..+++|.++...=..+...|.+.|.+|++..-.-...... ....+.++..+..+- -|.+.+++.++.
T Consensus 32 k~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~ 106 (301)
T 3tjr_A 32 RAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDV-----RHLDEMVRLADEAFRLL 106 (301)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccC-----CCHHHHHHHHHHHHHhC
Confidence 3455554444333344556777888777654333222222 222355666665543 244555544321
Q ss_pred -CceEEEEeCCCCCccc--ccCHHHHHHHHH
Q 014603 183 -NTVALVIINPGNPCGN--VYTYQHLQKIAE 210 (422)
Q Consensus 183 -~~~~i~i~~p~nptG~--~~~~~~l~~i~~ 210 (422)
+...++.+......+. ..+.++++++.+
T Consensus 107 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~ 137 (301)
T 3tjr_A 107 GGVDVVFSNAGIVVAGPLAQMNHDDWRWVID 137 (301)
T ss_dssp SSCSEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 3444443332222222 345666666555
No 353
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=23.08 E-value=3.3e+02 Score=22.69 Aligned_cols=64 Identities=19% Similarity=0.098 Sum_probs=30.1
Q ss_pred CEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhh
Q 014603 112 DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALA 180 (422)
Q Consensus 112 ~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~ 180 (422)
.+++|.++...=..+...|.+.|.+|++..-.-.......+..+.++..+..+- -|.+.+++.+
T Consensus 8 ~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~ 71 (263)
T 2a4k_A 8 TILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADV-----SDPKAVEAVF 71 (263)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCT-----TSHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCC-----CCHHHHHHHH
Confidence 455554443333344556667787777654322222233333333455554432 2455555443
No 354
>2ki0_A DS119; beta-alpha-beta, de novo protein; NMR {Synthetic}
Probab=22.95 E-value=52 Score=17.24 Aligned_cols=18 Identities=44% Similarity=0.506 Sum_probs=14.6
Q ss_pred HHHHHHHHHHHHHcCcEE
Q 014603 202 YQHLQKIAETAKKLGIMV 219 (422)
Q Consensus 202 ~~~l~~i~~~~~~~~~~l 219 (422)
+++++++.+-+++.|+.+
T Consensus 14 peelkklkeeakkanirv 31 (36)
T 2ki0_A 14 PEELKKLKEEAKKANIRV 31 (36)
T ss_dssp HHHHHHHHHHHHHHCCCC
T ss_pred HHHHHHHHHHHHhccEEE
Confidence 489999999998887653
No 355
>3mfq_A TROA, high-affinity zinc uptake system protein ZNUA; metal binding protein; 2.60A {Streptococcus suis} SCOP: c.92.2.0
Probab=22.93 E-value=74 Score=27.46 Aligned_cols=74 Identities=16% Similarity=0.139 Sum_probs=41.9
Q ss_pred CEEEecCCCccchHHHHhhCCCeEEEee-ccCCCCcccCHHHHHHh---hcC-CceEEEEeCCCCCcccccCHHHHHHHH
Q 014603 135 ANILLPRPGFPYYEARATHSHLEVRHFD-LLPAKGWEVDLDAVEAL---ADE-NTVALVIINPGNPCGNVYTYQHLQKIA 209 (422)
Q Consensus 135 d~Vl~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~d~~~l~~~---~~~-~~~~i~i~~p~nptG~~~~~~~l~~i~ 209 (422)
..+++..+.| .-.++.+|++...+. +.+ +-.+.+..|.+. +++ +.+++ ++.++.+. .-.+.|.
T Consensus 164 ~~~vt~H~af---~Y~~~~yGl~~~~~~~~~~--~~eps~~~l~~l~~~ik~~~v~~i-f~e~~~~~------~~~~~l~ 231 (282)
T 3mfq_A 164 RYLVTPHDAF---NYFAASYDFTLYAPQGVST--DSEVANSDMIETVNLIIDHNIKAI-FTESTTNP------ERMKKLQ 231 (282)
T ss_dssp CEEECSSSCC---HHHHHHTTCEEECSSCSSS--CSCCCHHHHHHHHHHHHHHTCCEE-ECBTTSCT------HHHHHHH
T ss_pred cEEEEECchH---HHHHHHCCCeEecccccCC--CCCCCHHHHHHHHHHHHHcCCCEE-EEeCCCCh------HHHHHHH
Confidence 3455545544 455678898876432 222 234566666554 333 44555 45554332 3467778
Q ss_pred HHHHHcCcEEE
Q 014603 210 ETAKKLGIMVI 220 (422)
Q Consensus 210 ~~~~~~~~~li 220 (422)
+++++.|+.++
T Consensus 232 ~~a~~~g~~v~ 242 (282)
T 3mfq_A 232 EAVKAKGGQVE 242 (282)
T ss_dssp HHHHTTSCCCE
T ss_pred HHHHhcCCceE
Confidence 88888887554
No 356
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=22.90 E-value=3.4e+02 Score=22.78 Aligned_cols=95 Identities=15% Similarity=0.155 Sum_probs=45.0
Q ss_pred CEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHH----hhCCCeEEEeeccCCCCcccCHHHHHHhhcC-----
Q 014603 112 DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARA----THSHLEVRHFDLLPAKGWEVDLDAVEALADE----- 182 (422)
Q Consensus 112 ~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~----- 182 (422)
.+++|.++...=..+.+.|.+.|.+|++..-.-....... ...+.++..+..+-. |.+.+++.++.
T Consensus 29 ~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~~~ 103 (277)
T 4fc7_A 29 VAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVR-----APPAVMAAVDQALKEF 103 (277)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTT-----CHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCC-----CHHHHHHHHHHHHHHc
Confidence 4555554443334455667788888777543332222211 123556666655432 44555443321
Q ss_pred -CceEEEEeCCCCCcc--cccCHHHHHHHHHH
Q 014603 183 -NTVALVIINPGNPCG--NVYTYQHLQKIAET 211 (422)
Q Consensus 183 -~~~~i~i~~p~nptG--~~~~~~~l~~i~~~ 211 (422)
+...++-+......+ ..++.+++++..++
T Consensus 104 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 135 (277)
T 4fc7_A 104 GRIDILINCAAGNFLCPAGALSFNAFKTVMDI 135 (277)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCCCEEEECCcCCCCCCcccCCHHHHHHHHHH
Confidence 344444332222222 13466777766553
No 357
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=22.87 E-value=1.5e+02 Score=25.58 Aligned_cols=113 Identities=12% Similarity=0.077 Sum_probs=58.4
Q ss_pred CCHHHHHHHHHHHhhcCCCC------CCCCCE-EEecCHHHHHHHHHHHhcC---CCCEEEecCCCccchHHHHhhCCCe
Q 014603 88 GILPARRAIADYLNRDLPYK------LSPDDV-YLTLGCTQAIEVILTVLAR---PGANILLPRPGFPYYEARATHSHLE 157 (422)
Q Consensus 88 g~~~lr~~ia~~l~~~~~~~------~~~~~i-~~~~g~~~a~~~~~~~l~~---~gd~Vl~~~~~~~~~~~~~~~~g~~ 157 (422)
...++++.+.+.-. .++.. -.+.+| ++.+|....+..++..... +.+.+++.+. +......++..|++
T Consensus 63 ~~~~L~~~f~~la~-~l~m~~~l~~~~~~~ri~vl~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn-~~~~~~~A~~~gIp 140 (286)
T 3n0v_A 63 DEAGFRAGLAERSE-AFGMAFELTAPNHRPKVVIMVSKADHCLNDLLYRQRIGQLGMDVVAVVSN-HPDLEPLAHWHKIP 140 (286)
T ss_dssp CHHHHHHHHHHHHG-GGTCEEEEECTTCCCEEEEEESSCCHHHHHHHHHHHTTSSCCEEEEEEES-SSTTHHHHHHTTCC
T ss_pred CHHHHHHHHHHHHH-HcCCEEEeecCCCCcEEEEEEeCCCCCHHHHHHHHHCCCCCcEEEEEEeC-cHHHHHHHHHcCCC
Confidence 35678877766433 23321 123345 5666666677777776533 2233333322 22334568889999
Q ss_pred EEEeeccCCCCcccCHHHHHHhhc-CCceEEEEeCCCCCcccccCHHHHHH
Q 014603 158 VRHFDLLPAKGWEVDLDAVEALAD-ENTVALVIINPGNPCGNVYTYQHLQK 207 (422)
Q Consensus 158 ~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~i~i~~p~nptG~~~~~~~l~~ 207 (422)
+..+|....+....+ +++.+.++ .++..+++.. .+.++|.+-++.
T Consensus 141 ~~~~~~~~~~r~~~~-~~~~~~l~~~~~Dlivla~----y~~il~~~~l~~ 186 (286)
T 3n0v_A 141 YYHFALDPKDKPGQE-RKVLQVIEETGAELVILAR----YMQVLSPELCRR 186 (286)
T ss_dssp EEECCCBTTBHHHHH-HHHHHHHHHHTCSEEEESS----CCSCCCHHHHHH
T ss_pred EEEeCCCcCCHHHHH-HHHHHHHHhcCCCEEEecc----cccccCHHHHhh
Confidence 887775331110111 22333333 2566666544 566777555543
No 358
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=22.87 E-value=1.8e+02 Score=25.42 Aligned_cols=111 Identities=9% Similarity=0.029 Sum_probs=55.3
Q ss_pred CHHHHHHHHHHHhhcCCCC------CCCCCE-EEecCHHHHHHHHHHHhcC---CCCEEEecCCCccchHHHHhhCCCeE
Q 014603 89 ILPARRAIADYLNRDLPYK------LSPDDV-YLTLGCTQAIEVILTVLAR---PGANILLPRPGFPYYEARATHSHLEV 158 (422)
Q Consensus 89 ~~~lr~~ia~~l~~~~~~~------~~~~~i-~~~~g~~~a~~~~~~~l~~---~gd~Vl~~~~~~~~~~~~~~~~g~~~ 158 (422)
..+|++.+.+.-.+ ++.. ..+.+| ++.+|....+..++..... +.+.+++.+ .+......++..|+++
T Consensus 79 ~~~L~~~l~~la~~-l~m~~~l~~~~~~~ri~vl~Sg~g~nl~~ll~~~~~g~l~~~I~~Vis-n~~~~~~~A~~~gIp~ 156 (302)
T 3o1l_A 79 LDGFREAFTPIAEE-FSMDWRITDSAQKKRVVLMASRESHCLADLLHRWHSDELDCDIACVIS-NHQDLRSMVEWHDIPY 156 (302)
T ss_dssp HHHHHHHHHHHHHH-HTCEEEEEETTSCCEEEEEECSCCHHHHHHHHHHHTTCSCSEEEEEEE-SSSTTHHHHHTTTCCE
T ss_pred HHHHHHHHHHHHHH-hCCeeeecccCCCcEEEEEEeCCchhHHHHHHHHHCCCCCcEEEEEEE-CcHHHHHHHHHcCCCE
Confidence 56777777554332 2211 123344 5566655677777776533 223333322 1222345688889888
Q ss_pred EEeeccCCCCcccCHHHHHHhhc-CCceEEEEeCCCCCcccccCHHHHH
Q 014603 159 RHFDLLPAKGWEVDLDAVEALAD-ENTVALVIINPGNPCGNVYTYQHLQ 206 (422)
Q Consensus 159 ~~~~~~~~~~~~~d~~~l~~~~~-~~~~~i~i~~p~nptG~~~~~~~l~ 206 (422)
..++....+....+ +++.+.++ .++..+++.. .+.++|.+-++
T Consensus 157 ~~~~~~~~~r~~~~-~~~~~~l~~~~~DliVlag----ym~IL~~~~l~ 200 (302)
T 3o1l_A 157 YHVPVDPKDKEPAF-AEVSRLVGHHQADVVVLAR----YMQILPPQLCR 200 (302)
T ss_dssp EECCCCSSCCHHHH-HHHHHHHHHTTCSEEEESS----CCSCCCTTHHH
T ss_pred EEcCCCcCCHHHHH-HHHHHHHHHhCCCEEEHhH----hhhhcCHHHHh
Confidence 77765322111111 23333333 3566666544 45566655444
No 359
>3io5_A Recombination and repair protein; storage dimer, inactive conformation, RECA like core domain, binding, DNA damage, DNA recombination; 2.40A {Enterobacteria phage T4}
Probab=22.75 E-value=1.5e+02 Score=26.26 Aligned_cols=102 Identities=14% Similarity=0.161 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHhcC-CCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHH-H----Hh--hcC-CceEEEE
Q 014603 119 CTQAIEVILTVLAR-PGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAV-E----AL--ADE-NTVALVI 189 (422)
Q Consensus 119 ~~~a~~~~~~~l~~-~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l-~----~~--~~~-~~~~i~i 189 (422)
++-++..+..+..+ +|..++..+..+......++..|.....+-+.... +.+++ . .+ +.. .+.++++
T Consensus 42 TtL~Lq~~~~~~~~g~g~~vlyId~E~s~~~~ra~~lGvd~d~llv~~~~----~~E~~~l~i~~~l~~i~~~~~~lvVI 117 (333)
T 3io5_A 42 SNFGLTMVSSYMRQYPDAVCLFYDSEFGITPAYLRSMGVDPERVIHTPVQ----SLEQLRIDMVNQLDAIERGEKVVVFI 117 (333)
T ss_dssp HHHHHHHHHHHHHHCTTCEEEEEESSCCCCHHHHHHTTCCGGGEEEEECS----BHHHHHHHHHHHHHTCCTTCCEEEEE
T ss_pred HHHHHHHHHHHHhcCCCceEEEEeccchhhHHHHHHhCCCHHHeEEEcCC----CHHHHHHHHHHHHHHhhccCceEEEE
Confidence 44555555554432 46777777766654455677777653222111111 33333 2 12 333 4566666
Q ss_pred eCCCCCc------cc--------cc----CHHHHHHHHHHHHHcCcEEE-Eccc
Q 014603 190 INPGNPC------GN--------VY----TYQHLQKIAETAKKLGIMVI-ADEV 224 (422)
Q Consensus 190 ~~p~npt------G~--------~~----~~~~l~~i~~~~~~~~~~li-~D~~ 224 (422)
-+.+.-. |. +. -...+.+|..+++++|+.+| +..+
T Consensus 118 DSI~aL~~~~eieg~~gd~~~gsv~qaR~~s~~LrkL~~~ak~~~i~vi~tNQV 171 (333)
T 3io5_A 118 DSLGNLASKKETEDALNEKVVSDMTRAKTMKSLFRIVTPYFSTKNIPCIAINHT 171 (333)
T ss_dssp ECSTTCBCC--------------CTHHHHHHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred ecccccccchhccCccccccccHHHHHHHHHHHHHHHHHHHHHhCCEEEEECCe
Confidence 5554321 10 00 01235566778899998765 4444
No 360
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=22.71 E-value=64 Score=31.30 Aligned_cols=29 Identities=24% Similarity=0.581 Sum_probs=25.2
Q ss_pred CHHHHHHHHHHHHHcCcEEEEcccccccc
Q 014603 201 TYQHLQKIAETAKKLGIMVIADEVYDHLA 229 (422)
Q Consensus 201 ~~~~l~~i~~~~~~~~~~li~D~~~~~~~ 229 (422)
+.++++++++.|+++|+-||.|-++....
T Consensus 218 t~~dfk~lv~~~H~~Gi~VilD~V~NH~~ 246 (585)
T 1wzl_A 218 DLPTFRRLVDEAHRRGIKIILDAVFNHAG 246 (585)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEcCCcCC
Confidence 35899999999999999999999876543
No 361
>3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A
Probab=22.66 E-value=55 Score=28.94 Aligned_cols=23 Identities=39% Similarity=0.485 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHcCcEEEEccc
Q 014603 202 YQHLQKIAETAKKLGIMVIADEV 224 (422)
Q Consensus 202 ~~~l~~i~~~~~~~~~~li~D~~ 224 (422)
.+.+++++++|.++|+++|+|--
T Consensus 104 ~~~ld~~v~~a~~~Gi~VilD~H 126 (327)
T 3pzt_A 104 KNKVKEAVEAAKELGIYVIIDWH 126 (327)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEec
Confidence 37899999999999999999853
No 362
>3qtp_A Enolase 1; glycolysis, lyase; HET: 2PG; 1.90A {Entamoeba histolytica}
Probab=22.56 E-value=2.1e+02 Score=26.43 Aligned_cols=94 Identities=13% Similarity=0.038 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHhcCCCCEEEecCCCcc----chHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCC
Q 014603 119 CTQAIEVILTVLARPGANILLPRPGFP----YYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGN 194 (422)
Q Consensus 119 ~~~a~~~~~~~l~~~gd~Vl~~~~~~~----~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~n 194 (422)
..+++..... ++++-+-+.+.+|... +|....+..+ ++..+. ++-+..+++.+++.++.+..=++..-++.
T Consensus 281 ~~elid~y~~-lle~ypI~~IEDPl~~dD~eg~a~Lt~~lg-~i~IvG---DEl~vTn~~~i~~~Ie~~a~n~IlIKvnq 355 (441)
T 3qtp_A 281 VDGLIAEYVD-YGKHYPIASIEDPFAEDDWAAWNKFTVEHG-NFQIVG---DDLLVTNPARVQMAMDKNACNSVLIKVNQ 355 (441)
T ss_dssp HHHHHHHHHH-HHHHSCEEEEESCSCTTCHHHHHHHHHHTT-TSEEEE---STTTTTCHHHHHHHHHHTCCSEEEECGGG
T ss_pred HHHHHHHHHH-HhhhcceeeecCCCChHHHHHHHHHHHhcC-CceEEe---ccccccCHHHHHHHHHcCCCCEEEecccc
Confidence 4555554443 3344468888888753 4555555555 222221 12223468888888765544445556665
Q ss_pred CcccccCHHHHHHHHHHHHHcCcEEEE
Q 014603 195 PCGNVYTYQHLQKIAETAKKLGIMVIA 221 (422)
Q Consensus 195 ptG~~~~~~~l~~i~~~~~~~~~~li~ 221 (422)
-.|+ .+..+++++|+++|..+++
T Consensus 356 iGGI----TEalkaa~lA~~~G~~vmv 378 (441)
T 3qtp_A 356 IGTL----TETFKTIKMAQEKGWGVMA 378 (441)
T ss_dssp TCCH----HHHHHHHHHHHHTTCEEEE
T ss_pred cccH----HHHHHHHHHHHHcCCeEEE
Confidence 4444 4788999999999998765
No 363
>2h1q_A Hypothetical protein; ZP_00559375.1, structural genomics, PSI-2, protein structure initiative; 2.01A {Desulfitobacterium hafniense dcb-2} PDB: 3l5o_A
Probab=22.55 E-value=1.7e+02 Score=24.98 Aligned_cols=72 Identities=17% Similarity=0.151 Sum_probs=45.6
Q ss_pred CCCEEEecCCCccchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHH
Q 014603 133 PGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETA 212 (422)
Q Consensus 133 ~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~ 212 (422)
+|++|.+.-.. +...... ..+.++..+..++..+. ...+..+..+.. ..++++ ||..+-...+.+|.+.|
T Consensus 140 ~g~kV~vIG~~-P~i~~~l-~~~~~v~V~d~~p~~g~-~p~~~~e~ll~~-aD~vii------TGsTlvN~Ti~~lL~~~ 209 (270)
T 2h1q_A 140 KGKKVGVVGHF-PHLESLL-EPICDLSILEWSPEEGD-YPLPASEFILPE-CDYVYI------TCASVVDKTLPRLLELS 209 (270)
T ss_dssp TTSEEEEESCC-TTHHHHH-TTTSEEEEEESSCCTTC-EEGGGHHHHGGG-CSEEEE------ETHHHHHTCHHHHHHHT
T ss_pred CCCEEEEECCC-HHHHHHH-hCCCCEEEEECCCCCCC-CChHHHHHHhhc-CCEEEE------EeeeeecCCHHHHHHhC
Confidence 56888877653 4444333 45778888988876442 233455665553 444444 67666656789999999
Q ss_pred HH
Q 014603 213 KK 214 (422)
Q Consensus 213 ~~ 214 (422)
+.
T Consensus 210 ~~ 211 (270)
T 2h1q_A 210 RN 211 (270)
T ss_dssp TT
T ss_pred cc
Confidence 75
No 364
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=22.52 E-value=3.2e+02 Score=22.40 Aligned_cols=94 Identities=21% Similarity=0.066 Sum_probs=43.4
Q ss_pred CEEEecCHHHHHHHHHHHhcCCCCEEEecCCCc-cchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhc------CCc
Q 014603 112 DVYLTLGCTQAIEVILTVLARPGANILLPRPGF-PYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALAD------ENT 184 (422)
Q Consensus 112 ~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~------~~~ 184 (422)
.+++|.++...=..+...|.+.|.+|++..-.- .......+..+.++..+..+- -|.+.+++.++ .+.
T Consensus 9 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~i 83 (249)
T 2ew8_A 9 LAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDV-----SQPGDVEAFGKQVISTFGRC 83 (249)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHHHHHHHSCC
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeec-----CCHHHHHHHHHHHHHHcCCC
Confidence 455554444333444556677787776653222 212222233455555555432 24455554432 134
Q ss_pred eEEEEeCCCCCccc--ccCHHHHHHHHH
Q 014603 185 VALVIINPGNPCGN--VYTYQHLQKIAE 210 (422)
Q Consensus 185 ~~i~i~~p~nptG~--~~~~~~l~~i~~ 210 (422)
..++-+....+.+. ..+.++++++.+
T Consensus 84 d~lv~nAg~~~~~~~~~~~~~~~~~~~~ 111 (249)
T 2ew8_A 84 DILVNNAGIYPLIPFDELTFEQWKKTFE 111 (249)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 44443332222221 245566666554
No 365
>2kfp_A Pspto_3016 protein; alpha, beta, double-WING, structural genomics, PSI-2, protein structure initiative; NMR {Pseudomonas syringae} PDB: 3h9x_A
Probab=22.48 E-value=1.2e+02 Score=22.46 Aligned_cols=38 Identities=11% Similarity=0.333 Sum_probs=28.2
Q ss_pred HHHHHhcCeEEecCCCCCCCCeEEEEec--cChHHHHHHHHH
Q 014603 371 LKLAKEESVIVLPGITVGLKDWLRITFA--VEPSALEDGLGR 410 (422)
Q Consensus 371 ~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~l~~~~~~ 410 (422)
..|.+..| +.||..+....|+.|.+. .++++|.++++.
T Consensus 72 ~~Lr~~~~--i~PayhmnK~hWisv~Ld~~v~d~~i~~lI~~ 111 (125)
T 2kfp_A 72 GSLRKKPG--IYPAYHMNKEHWITVLLNGPLGAKEIHSLIED 111 (125)
T ss_dssp HHHHHSTT--EEECSSSCSSSEEEEETTTTCCHHHHHHHHHH
T ss_pred HHHHhCCC--CCccccCCCCCeEEEEcCCCCCHHHHHHHHHH
Confidence 44445567 568888888899999986 677888777754
No 366
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=22.39 E-value=3.5e+02 Score=22.75 Aligned_cols=94 Identities=14% Similarity=-0.021 Sum_probs=44.0
Q ss_pred CEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHH---HHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC------
Q 014603 112 DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEA---RATHSHLEVRHFDLLPAKGWEVDLDAVEALADE------ 182 (422)
Q Consensus 112 ~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------ 182 (422)
.+++|.++...=..+...|.+.|.+|++..-.-..... .....+.++..+..+- -|.+.+++.++.
T Consensus 26 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g 100 (279)
T 3sju_A 26 TAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDV-----TSTDEVHAAVAAAVERFG 100 (279)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCT-----TCHHHHHHHHHHHHHHHC
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCC-----CCHHHHHHHHHHHHHHcC
Confidence 34555444433334455677788887765433222222 1222355666655433 245555443321
Q ss_pred CceEEEEeCCCCCcc--cccCHHHHHHHHH
Q 014603 183 NTVALVIINPGNPCG--NVYTYQHLQKIAE 210 (422)
Q Consensus 183 ~~~~i~i~~p~nptG--~~~~~~~l~~i~~ 210 (422)
+...++-+-...+.+ ...+.++++++.+
T Consensus 101 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 130 (279)
T 3sju_A 101 PIGILVNSAGRNGGGETADLDDALWADVLD 130 (279)
T ss_dssp SCCEEEECCCCCCCSCGGGCCHHHHHHHHH
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 334444333222222 2346677766555
No 367
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=22.33 E-value=3.4e+02 Score=22.53 Aligned_cols=30 Identities=10% Similarity=0.134 Sum_probs=16.7
Q ss_pred CEEEecCHHHHHHHHHHHhcCCCCEEEecC
Q 014603 112 DVYLTLGCTQAIEVILTVLARPGANILLPR 141 (422)
Q Consensus 112 ~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~ 141 (422)
.+++|.++...=..+.+.|.+.|.+|++..
T Consensus 9 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~ 38 (260)
T 1nff_A 9 VALVSGGARGMGASHVRAMVAEGAKVVFGD 38 (260)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 455554443333344556667788777653
No 368
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A
Probab=22.23 E-value=56 Score=28.21 Aligned_cols=24 Identities=8% Similarity=0.241 Sum_probs=20.9
Q ss_pred CHHHHHHHHHHHHHcCcEEEEccc
Q 014603 201 TYQHLQKIAETAKKLGIMVIADEV 224 (422)
Q Consensus 201 ~~~~l~~i~~~~~~~~~~li~D~~ 224 (422)
..+.++++++.|+++|+.+|+|--
T Consensus 62 ~~~~ld~~v~~a~~~Gi~Vild~H 85 (294)
T 2whl_A 62 DIDTIREVIELAEQNKMVAVVEVH 85 (294)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHHCCCEEEEEec
Confidence 357899999999999999999843
No 369
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A
Probab=22.18 E-value=73 Score=31.00 Aligned_cols=28 Identities=25% Similarity=0.488 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHHcCcEEEEcccccccc
Q 014603 202 YQHLQKIAETAKKLGIMVIADEVYDHLA 229 (422)
Q Consensus 202 ~~~l~~i~~~~~~~~~~li~D~~~~~~~ 229 (422)
.++++++++.|+++|+.||.|-++-...
T Consensus 198 ~~df~~Lv~~aH~~Gi~VilD~V~NH~~ 225 (601)
T 3edf_A 198 NEDFVRLSTEARKRGMGLIQDVVLSHIG 225 (601)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred HHHHHHHHHHHHHcCCEEEEEECCcccC
Confidence 3899999999999999999999976543
No 370
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=22.09 E-value=3.4e+02 Score=22.45 Aligned_cols=93 Identities=24% Similarity=0.123 Sum_probs=42.4
Q ss_pred CEEEecCHHHHHH-HHHHHhcCCCCEEEecCCCccc-hHHHHhhC----CCeEEEeeccCCCCcccCHHHHHHhhcC---
Q 014603 112 DVYLTLGCTQAIE-VILTVLARPGANILLPRPGFPY-YEARATHS----HLEVRHFDLLPAKGWEVDLDAVEALADE--- 182 (422)
Q Consensus 112 ~i~~~~g~~~a~~-~~~~~l~~~gd~Vl~~~~~~~~-~~~~~~~~----g~~~~~~~~~~~~~~~~d~~~l~~~~~~--- 182 (422)
.+++| |++..+- .+...|.+.|.+|++..-.-.. ........ +..+..+..+- -|.+.+++.++.
T Consensus 6 ~vlVT-Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~ 79 (260)
T 1x1t_A 6 VAVVT-GSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADL-----SKGEAVRGLVDNAVR 79 (260)
T ss_dssp EEEET-TCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCT-----TSHHHHHHHHHHHHH
T ss_pred EEEEe-CCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCC-----CCHHHHHHHHHHHHH
Confidence 34454 4444443 4455667788887775433222 22211111 44555554432 245555554431
Q ss_pred ---CceEEEEeCCCCCcc--cccCHHHHHHHHH
Q 014603 183 ---NTVALVIINPGNPCG--NVYTYQHLQKIAE 210 (422)
Q Consensus 183 ---~~~~i~i~~p~nptG--~~~~~~~l~~i~~ 210 (422)
+...++-+....+.+ ...+.+++++..+
T Consensus 80 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 112 (260)
T 1x1t_A 80 QMGRIDILVNNAGIQHTALIEDFPTEKWDAILA 112 (260)
T ss_dssp HHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 344444333222222 1245566666554
No 371
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=22.06 E-value=2.8e+02 Score=23.16 Aligned_cols=95 Identities=14% Similarity=0.078 Sum_probs=45.3
Q ss_pred CEEEecCHHHHHH-HHHHHhcCCCCEEEecC-CCccc---hHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcC----
Q 014603 112 DVYLTLGCTQAIE-VILTVLARPGANILLPR-PGFPY---YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE---- 182 (422)
Q Consensus 112 ~i~~~~g~~~a~~-~~~~~l~~~gd~Vl~~~-~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~---- 182 (422)
.+++.+|++..+- .+.+.|.+.|.+|++.. ..-.. .....+..+.++..+..+- -|.+.+++.++.
T Consensus 19 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~ 93 (270)
T 3is3_A 19 KVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADI-----RQVPEIVKLFDQAVAH 93 (270)
T ss_dssp CEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCT-----TSHHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCC-----CCHHHHHHHHHHHHHH
Confidence 3444444444544 44556777888887642 22111 1222233455666665543 245555544321
Q ss_pred --CceEEEEeCCCCCccc--ccCHHHHHHHHHH
Q 014603 183 --NTVALVIINPGNPCGN--VYTYQHLQKIAET 211 (422)
Q Consensus 183 --~~~~i~i~~p~nptG~--~~~~~~l~~i~~~ 211 (422)
+...++-+....+.+. -.+.+++++..++
T Consensus 94 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 126 (270)
T 3is3_A 94 FGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSL 126 (270)
T ss_dssp HSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 3344432222222232 3466777766653
No 372
>1yht_A DSPB; beta barrel, hydrolase; 2.00A {Aggregatibacter actinomycetemcomitans} SCOP: c.1.8.6
Probab=22.00 E-value=68 Score=28.99 Aligned_cols=24 Identities=33% Similarity=0.483 Sum_probs=22.0
Q ss_pred ccccCHHHHHHHHHHHHHcCcEEE
Q 014603 197 GNVYTYQHLQKIAETAKKLGIMVI 220 (422)
Q Consensus 197 G~~~~~~~l~~i~~~~~~~~~~li 220 (422)
+..++.+++++|++.|+++|+-||
T Consensus 89 ~g~YT~~di~eiv~YA~~rgI~VI 112 (367)
T 1yht_A 89 KPFLSYRQLDDIKAYAKAKGIELI 112 (367)
T ss_dssp CEEBCHHHHHHHHHHHHHTTCEEE
T ss_pred CCCcCHHHHHHHHHHHHHcCCEEE
Confidence 457999999999999999999988
No 373
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=21.90 E-value=3.6e+02 Score=22.66 Aligned_cols=94 Identities=13% Similarity=0.006 Sum_probs=45.8
Q ss_pred CEEEecCHHHHHHH-HHHHhcCCCCEEEecCCCcc--chHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhc----C--
Q 014603 112 DVYLTLGCTQAIEV-ILTVLARPGANILLPRPGFP--YYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALAD----E-- 182 (422)
Q Consensus 112 ~i~~~~g~~~a~~~-~~~~l~~~gd~Vl~~~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~----~-- 182 (422)
.+++.+|++.+|-. +...|.+.|-.|++..-.-. .........+.+...+..+-. |.+++++.++ +
T Consensus 8 KvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~v~~~~~~~G 82 (258)
T 4gkb_A 8 KVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQ-----DDAQCRDAVAQTIATFG 82 (258)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTT-----CHHHHHHHHHHHHHHHS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecC-----CHHHHHHHHHHHHHHhC
Confidence 45555555556544 44567778877666432221 112223334555666655432 4444443332 1
Q ss_pred CceEEEEeCC--CCCcccccCHHHHHHHHHH
Q 014603 183 NTVALVIINP--GNPCGNVYTYQHLQKIAET 211 (422)
Q Consensus 183 ~~~~i~i~~p--~nptG~~~~~~~l~~i~~~ 211 (422)
+.. +++.|. ..+...-.+.++|+++.++
T Consensus 83 ~iD-iLVNnAGi~~~~~~~~~~e~~~~~~~v 112 (258)
T 4gkb_A 83 RLD-GLVNNAGVNDGIGLDAGRDAFVASLER 112 (258)
T ss_dssp CCC-EEEECCCCCCCCCTTSCHHHHHHHHHH
T ss_pred CCC-EEEECCCCCCCCCccCCHHHHHHHHHH
Confidence 233 334444 2233344567778777664
No 374
>3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase, cell WALL, peptidoglycan-anchor, secreted; 2.10A {Streptococcus agalactiae COH1} PDB: 3fax_A*
Probab=21.87 E-value=61 Score=33.26 Aligned_cols=27 Identities=33% Similarity=0.524 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHcCcEEEEccccccc
Q 014603 202 YQHLQKIAETAKKLGIMVIADEVYDHL 228 (422)
Q Consensus 202 ~~~l~~i~~~~~~~~~~li~D~~~~~~ 228 (422)
.++++++++.|+++|+-||.|-++...
T Consensus 369 ~~efk~lV~~~H~~GI~VILDvV~NH~ 395 (877)
T 3faw_A 369 IAELKQLIHDIHKRGMGVILDVVYNHT 395 (877)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTCC
T ss_pred HHHHHHHHHHHHHcCCEEEEEEeeccc
Confidence 489999999999999999999998654
No 375
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1
Probab=21.80 E-value=68 Score=30.96 Aligned_cols=28 Identities=18% Similarity=0.351 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHHcCcEEEEcccccccc
Q 014603 202 YQHLQKIAETAKKLGIMVIADEVYDHLA 229 (422)
Q Consensus 202 ~~~l~~i~~~~~~~~~~li~D~~~~~~~ 229 (422)
.++++++++.|+++|+.||.|-+.....
T Consensus 92 ~~df~~lv~~aH~~Gi~VilD~V~NH~s 119 (570)
T 1m53_A 92 MEDFDSLVAEMKKRNMRLMIDVVINHTS 119 (570)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEeccccc
Confidence 4899999999999999999999976543
No 376
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=21.76 E-value=3.5e+02 Score=22.70 Aligned_cols=31 Identities=19% Similarity=0.117 Sum_probs=17.8
Q ss_pred CCEEEecCHHHHHHHHHHHhcCCCCEEEecC
Q 014603 111 DDVYLTLGCTQAIEVILTVLARPGANILLPR 141 (422)
Q Consensus 111 ~~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~ 141 (422)
..+++|.++...=..+.+.|.+.|.+|++..
T Consensus 16 k~~lVTGas~gIG~a~a~~la~~G~~V~~~~ 46 (280)
T 3pgx_A 16 RVAFITGAARGQGRSHAVRLAAEGADIIACD 46 (280)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 3455554444333444556777888877753
No 377
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A*
Probab=21.73 E-value=69 Score=30.82 Aligned_cols=28 Identities=21% Similarity=0.442 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHcCcEEEEcccccccc
Q 014603 202 YQHLQKIAETAKKLGIMVIADEVYDHLA 229 (422)
Q Consensus 202 ~~~l~~i~~~~~~~~~~li~D~~~~~~~ 229 (422)
.++++++++.|+++|+-||.|-++....
T Consensus 79 ~~df~~Lv~~aH~~Gi~VilD~V~NHts 106 (557)
T 1zja_A 79 MEDFDRLMAELKKRGMRLMVDVVINHSS 106 (557)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEeccccc
Confidence 4899999999999999999999986543
No 378
>1x92_A APC5045, phosphoheptose isomerase; midwest centre for structural genomics, SIS domain, A/B protein, lipopolysaccharide biosynthesis, PSI; HET: M7P; 2.30A {Pseudomonas aeruginosa} SCOP: c.80.1.3 PDB: 3bjz_A
Probab=21.71 E-value=3e+02 Score=21.68 Aligned_cols=39 Identities=23% Similarity=0.388 Sum_probs=26.3
Q ss_pred HHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEE
Q 014603 175 AVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVI 220 (422)
Q Consensus 175 ~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li 220 (422)
.+...++++..+++++.. |.. .++.++++.+++.|+.+|
T Consensus 106 ~~~~~~~~~DvvI~iS~S----G~t---~~~i~~~~~ak~~g~~vI 144 (199)
T 1x92_A 106 QIRALGQPGDVLLAISTS----GNS---ANVIQAIQAAHDREMLVV 144 (199)
T ss_dssp HHHHHCCTTCEEEEECSS----SCC---HHHHHHHHHHHHTTCEEE
T ss_pred HHHhCCCCCCEEEEEeCC----CCC---HHHHHHHHHHHHCCCEEE
Confidence 344445666666666663 433 567788899999997765
No 379
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=21.62 E-value=1.9e+02 Score=24.78 Aligned_cols=50 Identities=16% Similarity=0.136 Sum_probs=36.4
Q ss_pred CcccCHHHHHHhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHHHcCcEEEEcc
Q 014603 168 GWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADE 223 (422)
Q Consensus 168 ~~~~d~~~l~~~~~~~~~~i~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~ 223 (422)
++.+|+.++.++..-+..++++... .++.++++++.+.|++.|+-++++-
T Consensus 127 dfi~d~~qi~ea~~~GAD~VlLi~a------~L~~~~l~~l~~~a~~lGl~~lvev 176 (272)
T 3tsm_A 127 DFLFDPYQVYEARSWGADCILIIMA------SVDDDLAKELEDTAFALGMDALIEV 176 (272)
T ss_dssp SCCCSTHHHHHHHHTTCSEEEEETT------TSCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CccCCHHHHHHHHHcCCCEEEEccc------ccCHHHHHHHHHHHHHcCCeEEEEe
Confidence 3456777887776666666655433 3466889999999999999888764
No 380
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=21.48 E-value=3.6e+02 Score=22.54 Aligned_cols=95 Identities=22% Similarity=0.137 Sum_probs=45.3
Q ss_pred CEEEecCHHHHHHH-HHHHhcCCCCEEEecCCCccchHHH---HhhCCCeEEEeeccCCCCcccCHHHHHHhhcC-----
Q 014603 112 DVYLTLGCTQAIEV-ILTVLARPGANILLPRPGFPYYEAR---ATHSHLEVRHFDLLPAKGWEVDLDAVEALADE----- 182 (422)
Q Consensus 112 ~i~~~~g~~~a~~~-~~~~l~~~gd~Vl~~~~~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~----- 182 (422)
.+++.+|++.++-. +...|.+.|.+|++..-.-...... ....+..+..+..+- -|.+.+++.++.
T Consensus 5 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~ 79 (264)
T 3tfo_A 5 KVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDV-----TDRHSVAAFAQAAVDTW 79 (264)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCC-----CCHHHHHHHHHHHHHHc
Confidence 34444555555544 4456677888877754332222222 222355666665433 244555443321
Q ss_pred -CceEEEEeCCCCCccc--ccCHHHHHHHHHH
Q 014603 183 -NTVALVIINPGNPCGN--VYTYQHLQKIAET 211 (422)
Q Consensus 183 -~~~~i~i~~p~nptG~--~~~~~~l~~i~~~ 211 (422)
+...++-+-...+.+. -.+.++++++.++
T Consensus 80 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~v 111 (264)
T 3tfo_A 80 GRIDVLVNNAGVMPLSPLAAVKVDEWERMIDV 111 (264)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 3444443333333232 3466777666553
No 381
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=21.32 E-value=3.3e+02 Score=22.12 Aligned_cols=29 Identities=14% Similarity=0.005 Sum_probs=15.5
Q ss_pred EEEecCHHHHHHHHHHHhcCCCCEEEecC
Q 014603 113 VYLTLGCTQAIEVILTVLARPGANILLPR 141 (422)
Q Consensus 113 i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~ 141 (422)
+++|.++...=..+...|.+.|.+|++..
T Consensus 5 vlItGasggiG~~~a~~l~~~G~~V~~~~ 33 (250)
T 2cfc_A 5 AIVTGASSGNGLAIATRFLARGDRVAALD 33 (250)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEeCCCchHHHHHHHHHHHCCCEEEEEe
Confidence 44554433333344555667787776654
No 382
>7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A
Probab=21.25 E-value=62 Score=28.17 Aligned_cols=24 Identities=29% Similarity=0.296 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHcCcEEEEcccc
Q 014603 202 YQHLQKIAETAKKLGIMVIADEVY 225 (422)
Q Consensus 202 ~~~l~~i~~~~~~~~~~li~D~~~ 225 (422)
.+.++++++.|.++|+.+|+|--.
T Consensus 79 ~~~ld~~v~~a~~~Gi~Vild~H~ 102 (303)
T 7a3h_A 79 KEKVKEAVEAAIDLDIYVIIDWHI 102 (303)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEecc
Confidence 377999999999999999998654
No 383
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=21.19 E-value=3.5e+02 Score=22.29 Aligned_cols=30 Identities=33% Similarity=0.381 Sum_probs=17.0
Q ss_pred CEEEecCHHHHHH-HHHHHhcCCCCEEEecCC
Q 014603 112 DVYLTLGCTQAIE-VILTVLARPGANILLPRP 142 (422)
Q Consensus 112 ~i~~~~g~~~a~~-~~~~~l~~~gd~Vl~~~~ 142 (422)
.+++| |++.++- .+.+.|.+.|.+|++..-
T Consensus 9 ~~lVT-Gas~GIG~aia~~l~~~G~~V~~~~r 39 (250)
T 3nyw_A 9 LAIIT-GASQGIGAVIAAGLATDGYRVVLIAR 39 (250)
T ss_dssp EEEEE-STTSHHHHHHHHHHHHHTCEEEEEES
T ss_pred EEEEE-CCCcHHHHHHHHHHHHCCCEEEEEEC
Confidence 34455 4444443 445566677878776543
No 384
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=21.05 E-value=3.7e+02 Score=22.61 Aligned_cols=95 Identities=9% Similarity=0.135 Sum_probs=52.2
Q ss_pred HHHHHHHHhcCCC-CEEEecCCCc---cchHHHHhhCCCeEEEeeccCCCCcccCHHHHHHhhcCCceEEEEeCCCCCcc
Q 014603 122 AIEVILTVLARPG-ANILLPRPGF---PYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCG 197 (422)
Q Consensus 122 a~~~~~~~l~~~g-d~Vl~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~nptG 197 (422)
+++..+..+.+.| |.+++++--+ ..+...++..|+..+.+-. |. -+.+.+++..+.....+++.+-...||
T Consensus 104 G~e~F~~~~~~aGvdG~IipDLP~eE~~~~~~~~~~~Gl~~I~lva-P~----t~~eRi~~ia~~a~gFiY~Vs~~GvTG 178 (252)
T 3tha_A 104 GLEKFVKKAKSLGICALIVPELSFEESDDLIKECERYNIALITLVS-VT----TPKERVKKLVKHAKGFIYLLASIGITG 178 (252)
T ss_dssp CHHHHHHHHHHTTEEEEECTTCCGGGCHHHHHHHHHTTCEECEEEE-TT----SCHHHHHHHHTTCCSCEEEECCSCSSS
T ss_pred hHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHHcCCeEEEEeC-CC----CcHHHHHHHHHhCCCeEEEEecCCCCC
Confidence 3444555555556 8888887544 3456677778887654332 22 235666665544444444444345678
Q ss_pred cccC-HHHHHHHHHHHHHc-CcEEEE
Q 014603 198 NVYT-YQHLQKIAETAKKL-GIMVIA 221 (422)
Q Consensus 198 ~~~~-~~~l~~i~~~~~~~-~~~li~ 221 (422)
..-. .+++.++++..+++ ++.+++
T Consensus 179 ~~~~~~~~~~~~v~~vr~~~~~Pv~v 204 (252)
T 3tha_A 179 TKSVEEAILQDKVKEIRSFTNLPIFV 204 (252)
T ss_dssp CSHHHHHHHHHHHHHHHTTCCSCEEE
T ss_pred cccCCCHHHHHHHHHHHHhcCCcEEE
Confidence 6532 23466666666654 444443
No 385
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=21.00 E-value=3e+02 Score=23.63 Aligned_cols=50 Identities=10% Similarity=0.067 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCEEEecC---HHHHHHHHHHHhcCCC-CEEEecCCCccc
Q 014603 90 LPARRAIADYLNRDLPYKLSPDDVYLTLG---CTQAIEVILTVLARPG-ANILLPRPGFPY 146 (422)
Q Consensus 90 ~~lr~~ia~~l~~~~~~~~~~~~i~~~~g---~~~a~~~~~~~l~~~g-d~Vl~~~~~~~~ 146 (422)
.+-|..+.+...+. +. . |+.+.| +.+++..+-.+- +.| |.|++..|.|..
T Consensus 51 ~eEr~~v~~~~~~~----~~-g-ViaGvg~~~t~~ai~la~~A~-~~Gadavlv~~P~y~~ 104 (288)
T 2nuw_A 51 KDEKRQNLNALYDV----TH-K-LIFQVGSLNLNDVMELVKFSN-EMDILGVSSHSPYYFP 104 (288)
T ss_dssp HHHHHHHHHHHTTT----CS-C-EEEECCCSCHHHHHHHHHHHH-TSCCSEEEECCCCSSC
T ss_pred HHHHHHHHHHHHHH----hC-C-eEEeeCCCCHHHHHHHHHHHH-hcCCCEEEEcCCcCCC
Confidence 45555666665431 12 2 776655 466666554443 344 899999998854
No 386
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=20.93 E-value=72 Score=31.37 Aligned_cols=28 Identities=25% Similarity=0.389 Sum_probs=25.2
Q ss_pred CHHHHHHHHHHHHHcCcEEEEccccccc
Q 014603 201 TYQHLQKIAETAKKLGIMVIADEVYDHL 228 (422)
Q Consensus 201 ~~~~l~~i~~~~~~~~~~li~D~~~~~~ 228 (422)
+.++++++++.|+++|+-||.|-++...
T Consensus 284 t~~df~~LV~~aH~~GI~VIlD~V~NHt 311 (645)
T 4aef_A 284 GDRAFVDLLSELKRFDIKVILDGVFHHT 311 (645)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBC
T ss_pred CHHHHHHHHHHhhhcCCEEEEEeccccc
Confidence 5699999999999999999999997653
No 387
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=20.88 E-value=3.3e+02 Score=21.94 Aligned_cols=95 Identities=18% Similarity=0.107 Sum_probs=46.4
Q ss_pred CEEEecCHHHHHHHHHHHhcCCCCEEEecCCCccchHHHH----hhCCCeEEEeeccCCCCcccCHHHHHHhhcC-----
Q 014603 112 DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARA----THSHLEVRHFDLLPAKGWEVDLDAVEALADE----- 182 (422)
Q Consensus 112 ~i~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~----- 182 (422)
.+++|.++...=..+.+.|.+.|.+|++..-......... ...+.++..+..+- -|.+.+++.++.
T Consensus 4 ~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~ 78 (235)
T 3l77_A 4 VAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDV-----SKAESVEEFSKKVLERF 78 (235)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCT-----TCHHHHHHHCC-HHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEecc-----CCHHHHHHHHHHHHHhc
Confidence 3455554443333445567778877776543332222211 13355666665433 255666665442
Q ss_pred -CceEEEEeCCCCCccc--ccCHHHHHHHHHH
Q 014603 183 -NTVALVIINPGNPCGN--VYTYQHLQKIAET 211 (422)
Q Consensus 183 -~~~~i~i~~p~nptG~--~~~~~~l~~i~~~ 211 (422)
+...++.+....+.+. ..+.+++++..++
T Consensus 79 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 110 (235)
T 3l77_A 79 GDVDVVVANAGLGYFKRLEELSEEEFHEMIEV 110 (235)
T ss_dssp SSCSEEEECCCCCCCCCTTTSCHHHHHHHHHH
T ss_pred CCCCEEEECCccccccCcccCCHHHHHHHHHH
Confidence 3444444333332222 2466777766553
No 388
>3rcn_A Beta-N-acetylhexosaminidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta half sandwich; HET: MSE; 2.51A {Arthrobacter aurescens}
Probab=20.74 E-value=74 Score=30.51 Aligned_cols=114 Identities=22% Similarity=0.316 Sum_probs=63.1
Q ss_pred CCCCCCCEEEecCHHHHHHHHHHHhc---C----------CCC------EEEecCCCccc-------------------h
Q 014603 106 YKLSPDDVYLTLGCTQAIEVILTVLA---R----------PGA------NILLPRPGFPY-------------------Y 147 (422)
Q Consensus 106 ~~~~~~~i~~~~g~~~a~~~~~~~l~---~----------~gd------~Vl~~~~~~~~-------------------~ 147 (422)
..+ ++.|.++.++..++.-.+++|. . .|. ..+...|-|.- +
T Consensus 82 L~v-~~~i~I~a~~~~G~f~glqTL~QLl~~~~~~~~~~~~~~~~~ip~~~I~D~Prf~~RG~mLDvsRhf~~~~~ik~~ 160 (543)
T 3rcn_A 82 LEV-SDAVVISAGGAAGAFYGAQTLLQLLGPAALRQAPVVAVEGWSVPRVSVEDKPRFGYRGTMLDVARHFMPKDNVLRF 160 (543)
T ss_dssp EEE-SSSEEEEESSHHHHHHHHHHHHHHHCGGGGSSSCCSCCSCEEEEEEEEEECCSCSEEEEEEETTTSCCCHHHHHHH
T ss_pred EEE-CCeEEEEECCHHHHHHHHHHHHHHHhhhcccccccccCcceeccCEEEEecCCCCccccccccCCCccCHHHHHHH
Confidence 356 6788888777666665555542 1 121 12334555521 2
Q ss_pred HHHHhhCCCeEEEeeccCCCCcccCHHHHHHhh-----cCCceEEEE-e--CCCCCcccccCHHHHHHHHHHHHHcCcEE
Q 014603 148 EARATHSHLEVRHFDLLPAKGWEVDLDAVEALA-----DENTVALVI-I--NPGNPCGNVYTYQHLQKIAETAKKLGIMV 219 (422)
Q Consensus 148 ~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~-----~~~~~~i~i-~--~p~nptG~~~~~~~l~~i~~~~~~~~~~l 219 (422)
.......+.+....-+.++.+|.+..+..-++- +..+..--. . .-..|.|-.|+.+++++|++.|+++|+-|
T Consensus 161 ID~MA~~KlN~lH~HltDdqgwriei~~yP~Lt~~Ga~r~~t~~g~~~~~~~~~~~~~g~YT~~di~eIv~YA~~rgI~V 240 (543)
T 3rcn_A 161 IEVMAMHKLNVLHLHLTDDQGWRMQINRYPKLTETGAWRRESSLGSWRAGVFDGRPHGGFYTQDDLREIVAFAADRHITV 240 (543)
T ss_dssp HHHHHHTTCCEEEEECEETTEECBCCSSCTHHHHTTTEESCCBSSCGGGCCBCCCCEECCBCHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHcCCcEEEeecccccCcchhcccchhhhhhccccccccccccccccccCCccCCCcCHHHHHHHHHHHHHcCCEE
Confidence 344445566666666655445544433322211 111100000 0 01234577899999999999999999998
Q ss_pred E
Q 014603 220 I 220 (422)
Q Consensus 220 i 220 (422)
|
T Consensus 241 I 241 (543)
T 3rcn_A 241 I 241 (543)
T ss_dssp E
T ss_pred e
Confidence 8
No 389
>1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1
Probab=20.72 E-value=74 Score=30.58 Aligned_cols=27 Identities=11% Similarity=0.252 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHHcCcEEEEccccccc
Q 014603 202 YQHLQKIAETAKKLGIMVIADEVYDHL 228 (422)
Q Consensus 202 ~~~l~~i~~~~~~~~~~li~D~~~~~~ 228 (422)
.++++++++.|+++|+.||+|-+....
T Consensus 78 ~~df~~lv~~~h~~Gi~VilD~V~NH~ 104 (558)
T 1uok_A 78 MEDWDELLHEMHERNMKLMMDLVVNHT 104 (558)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEecccc
Confidence 489999999999999999999997653
No 390
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=20.64 E-value=4e+02 Score=22.71 Aligned_cols=95 Identities=20% Similarity=0.115 Sum_probs=44.9
Q ss_pred CEEEecCHHHHHH-HHHHHhcCCCCEEEecCCCccchHHHHhh---CC-CeEEEeeccCCCCcccCHHHHHHhhcC----
Q 014603 112 DVYLTLGCTQAIE-VILTVLARPGANILLPRPGFPYYEARATH---SH-LEVRHFDLLPAKGWEVDLDAVEALADE---- 182 (422)
Q Consensus 112 ~i~~~~g~~~a~~-~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~---~g-~~~~~~~~~~~~~~~~d~~~l~~~~~~---- 182 (422)
.+++.+|++..+- .+.+.|.+.|-+|++..-.-......... .+ .++..+..+- -|.+.+++.++.
T Consensus 42 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~ 116 (293)
T 3rih_A 42 RSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDV-----SDPGSCADAARTVVDA 116 (293)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeC-----CCHHHHHHHHHHHHHH
Confidence 3444444444444 44556777888877764333333222222 22 3455555432 244555443321
Q ss_pred --CceEEEEeCCCCCccc--ccCHHHHHHHHHH
Q 014603 183 --NTVALVIINPGNPCGN--VYTYQHLQKIAET 211 (422)
Q Consensus 183 --~~~~i~i~~p~nptG~--~~~~~~l~~i~~~ 211 (422)
+...++-+-...+.+. -++.++++++.++
T Consensus 117 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~v 149 (293)
T 3rih_A 117 FGALDVVCANAGIFPEARLDTMTPEQLSEVLDV 149 (293)
T ss_dssp HSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 3344443322322222 3466777776653
No 391
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=20.57 E-value=2.5e+02 Score=22.79 Aligned_cols=88 Identities=14% Similarity=0.163 Sum_probs=44.3
Q ss_pred EEecCHHHHHHHHHHHhcCC--CCEE--EecCCCccchHHHHhhCCCeEEEeeccCCCC-cccCHHHHHHhh-cCCceEE
Q 014603 114 YLTLGCTQAIEVILTVLARP--GANI--LLPRPGFPYYEARATHSHLEVRHFDLLPAKG-WEVDLDAVEALA-DENTVAL 187 (422)
Q Consensus 114 ~~~~g~~~a~~~~~~~l~~~--gd~V--l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~d~~~l~~~~-~~~~~~i 187 (422)
++.+|.-..+..++..+... +-+| ++.++.-..-...++..|+++..++.....+ ...+ +++.+.+ .-++..+
T Consensus 5 Vl~SG~Gs~L~aLi~~~~~~~~~~~I~~Vvs~~~~~~~~~~A~~~gIp~~~~~~~~~~~r~~~~-~~~~~~l~~~~~Dli 83 (209)
T 1meo_A 5 VLISGTGSNLQALIDSTREPNSSAQIDIVISNKAAVAGLDKAERAGIPTRVINHKLYKNRVEFD-SAIDLVLEEFSIDIV 83 (209)
T ss_dssp EEESSSCTTHHHHHHHHHSTTCSCEEEEEEESSTTCHHHHHHHHTTCCEEECCGGGSSSHHHHH-HHHHHHHHHTTCCEE
T ss_pred EEEECCchHHHHHHHHHhcCCCCcEEEEEEeCCCChHHHHHHHHcCCCEEEECccccCchhhhh-HHHHHHHHhcCCCEE
Confidence 45566556777777765433 2222 3344433333567888898887654321110 0111 2233333 2356666
Q ss_pred EEeCCCCCcccccCHHHHH
Q 014603 188 VIINPGNPCGNVYTYQHLQ 206 (422)
Q Consensus 188 ~i~~p~nptG~~~~~~~l~ 206 (422)
++.. .|.++|.+-+.
T Consensus 84 v~a~----y~~il~~~~l~ 98 (209)
T 1meo_A 84 CLAG----FMRILSGPFVQ 98 (209)
T ss_dssp EEES----CCSCCCHHHHH
T ss_pred EEcc----hhhhCCHHHHh
Confidence 6554 46677755544
No 392
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A*
Probab=20.54 E-value=83 Score=30.65 Aligned_cols=29 Identities=31% Similarity=0.588 Sum_probs=25.7
Q ss_pred CHHHHHHHHHHHHHcCcEEEEcccccccc
Q 014603 201 TYQHLQKIAETAKKLGIMVIADEVYDHLA 229 (422)
Q Consensus 201 ~~~~l~~i~~~~~~~~~~li~D~~~~~~~ 229 (422)
+.++++++++.|+++|+-||.|-++....
T Consensus 191 t~~d~~~lv~~~H~~Gi~VilD~V~NH~~ 219 (602)
T 2bhu_A 191 RPEDLMALVDAAHRLGLGVFLDVVYNHFG 219 (602)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSCCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEecccccc
Confidence 35999999999999999999999987654
No 393
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=20.49 E-value=1.2e+02 Score=22.86 Aligned_cols=58 Identities=21% Similarity=0.288 Sum_probs=36.6
Q ss_pred ccCHHHHHHhhcC-CceEEEEeCCCCCcccccCH-HHHHHHHHH-HHHcCc-EEEEcccccc
Q 014603 170 EVDLDAVEALADE-NTVALVIINPGNPCGNVYTY-QHLQKIAET-AKKLGI-MVIADEVYDH 227 (422)
Q Consensus 170 ~~d~~~l~~~~~~-~~~~i~i~~p~nptG~~~~~-~~l~~i~~~-~~~~~~-~li~D~~~~~ 227 (422)
..+.+.|++.+.+ +...+++--|-|..|..-+. ...++.++. .++.++ +..+||-++.
T Consensus 39 ~~~~~~l~~li~e~~v~~iVvGlP~~mdGt~~~~~~~~~~f~~~L~~~~~lpV~~~DERlTT 100 (138)
T 1nu0_A 39 TPDWNIIERLLKEWQPDEIIVGLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLST 100 (138)
T ss_dssp EECHHHHHHHHHHHCCSEEEEEEEECTTSCBCHHHHHHHHHHHHHHHHHCCCEEEEEEECCC
T ss_pred chHHHHHHHHHHHcCCCEEEEecccCCCcCcCHHHHHHHHHHHHHHHHhCCCEEEEcCCcCH
Confidence 4578888887765 67788888897777765322 223444433 334565 4458888764
No 394
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=20.31 E-value=2.4e+02 Score=25.44 Aligned_cols=25 Identities=16% Similarity=0.219 Sum_probs=18.4
Q ss_pred CHHHHHHHHHHhcCeEEecCCCCCC
Q 014603 365 SDMEFALKLAKEESVIVLPGITVGL 389 (422)
Q Consensus 365 ~~~~~~~~l~~~~gi~v~~g~~~~~ 389 (422)
+-.+++...+...++.|..+..|+-
T Consensus 314 ~~~~vl~~~~~~~~iPVv~~~~~GH 338 (371)
T 3tla_A 314 RPYEVLTEVLDGKQIPVLDGFDCSH 338 (371)
T ss_dssp CHHHHHHHHHTTCCCCEEEEESCSS
T ss_pred cHHHHHHHHHhhCCCcEEECCCCCC
Confidence 4566777777778999988777764
No 395
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=20.24 E-value=3.2e+02 Score=24.03 Aligned_cols=34 Identities=21% Similarity=0.263 Sum_probs=28.5
Q ss_pred CCCcccccCHHHHHHHHHHHHHcCcEEEEccccc
Q 014603 193 GNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYD 226 (422)
Q Consensus 193 ~nptG~~~~~~~l~~i~~~~~~~~~~li~D~~~~ 226 (422)
.+|.+-....+...++++.|+++|+.+++|--|+
T Consensus 50 v~P~~g~~d~~~~~~~~~~ak~~Gl~v~ld~hys 83 (334)
T 1fob_A 50 VNPSDGSYDLDYNLELAKRVKAAGMSLYLDLHLS 83 (334)
T ss_dssp SCCTTCTTCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred ECCCCCccCHHHHHHHHHHHHHCCCEEEEEeccC
Confidence 5677777778999999999999999999995554
Done!