BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014605
(421 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3FJO|A Chain A, Structure Of Chimeric Yh Cpr
Length = 637
Score = 221 bits (564), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 135/425 (31%), Positives = 221/425 (52%), Gaps = 26/425 (6%)
Query: 12 GKLSNYNNKA------VCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEIL 65
G+L +Y N+ FL + G+ + + H E + + I YE GD + +
Sbjct: 224 GRLKSYENQKPPFDAKNPFLAAVTTNRKLNQGTERHLMHLELDISDSKIRYESGDHVAVY 283
Query: 66 PSQDPAAVDTFIQRCNLDPDALITVQHKEMKNYLPDIHKNTTEVPIKLRTFVELTMDVTS 125
P+ D A V+ + D D ++++ + + ++ K+ P RT + +D+T+
Sbjct: 284 PANDSALVNQLGKILGADLDVVMSLNNLDEESN----KKHPFPCPTSYRTALTYYLDITN 339
Query: 126 ASPRRYFFEVMSYFATAEHEKERLQYFASP--EGRDDLYKYNQKERRTVLEVLEDFPSVQ 183
PR ++ +A+ E+E L+ AS EG++ + + RR +L +L+D PS++
Sbjct: 340 -PPRTNVLYELAQYASEPSEQELLRKMASSSGEGKELYLSWVVEARRHILAILQDCPSLR 398
Query: 184 MPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLD 243
PID L +L+P L+ R +SI+SS HPN VH+ VV + T R G+ + WL +
Sbjct: 399 PPIDHLCELLPRLQARYYSIASSSKVHPNSVHICAVVVEYETKAGRINKGVATNWLRAKE 458
Query: 244 P--QQG--IYIPAWFQKGSLPRP-PPSVPLILIGPGTGCAPFRGFVEERA-IQSSSGPAA 297
P + G +P + +K P + P+I++GPGTG APF GF++ERA ++
Sbjct: 459 PAGENGGRALVPMFVRKSQFRLPFKATTPVIMVGPGTGVAPFIGFIQERAWLRQQGKEVG 518
Query: 298 PIIFFFGCRNED-DFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQPQKVYVQHKMLEQ 356
+ ++GCR D D+LYRE L+ DG ++ VAFSR+Q KVYVQH + +
Sbjct: 519 ETLLYYGCRRSDEDYLYRE-ELAQFHRDGALTQ-----LNVAFSREQSHKVYVQHLLKQD 572
Query: 357 SQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 416
+ +W L+ A IYV G A M DV +TF +IV++ G A +++K L GRY
Sbjct: 573 REHLWKLIEGGAHIYVCGDARNMARDVQNTFYDIVAELGAMEHAQAVDYIKKLMTKGRYS 632
Query: 417 VEAWS 421
++ WS
Sbjct: 633 LDVWS 637
>pdb|3QFS|A Chain A, Crystal Structure Of Nadph-Cytochrome P450 Reductase
(FadNADPH Domain)
Length = 458
Score = 221 bits (564), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 135/425 (31%), Positives = 221/425 (52%), Gaps = 26/425 (6%)
Query: 12 GKLSNYNNKA------VCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEIL 65
G+L +Y N+ FL + G+ + + H E + + I YE GD + +
Sbjct: 45 GRLKSYENQKPPFDAKNPFLAAVTTNRKLNQGTERHLMHLELDISDSKIRYESGDHVAVY 104
Query: 66 PSQDPAAVDTFIQRCNLDPDALITVQHKEMKNYLPDIHKNTTEVPIKLRTFVELTMDVTS 125
P+ D A V+ + D D ++++ + + ++ K+ P RT + +D+T+
Sbjct: 105 PANDSALVNQLGKILGADLDVVMSLNNLDEESN----KKHPFPCPTSYRTALTYYLDITN 160
Query: 126 ASPRRYFFEVMSYFATAEHEKERLQYFASP--EGRDDLYKYNQKERRTVLEVLEDFPSVQ 183
PR ++ +A+ E+E L+ AS EG++ + + RR +L +L+D PS++
Sbjct: 161 -PPRTNVLYELAQYASEPSEQELLRKMASSSGEGKELYLSWVVEARRHILAILQDCPSLR 219
Query: 184 MPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLD 243
PID L +L+P L+ R +SI+SS HPN VH+ VV + T R G+ + WL +
Sbjct: 220 PPIDHLCELLPRLQARYYSIASSSKVHPNSVHICAVVVEYETKAGRINKGVATNWLRAKE 279
Query: 244 P--QQG--IYIPAWFQKGSLPRP-PPSVPLILIGPGTGCAPFRGFVEERA-IQSSSGPAA 297
P + G +P + +K P + P+I++GPGTG APF GF++ERA ++
Sbjct: 280 PVGENGGRALVPMFVRKSQFRLPFKATTPVIMVGPGTGVAPFIGFIQERAWLRQQGKEVG 339
Query: 298 PIIFFFGCRNED-DFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQPQKVYVQHKMLEQ 356
+ ++GCR D D+LYRE L+ DG ++ VAFSR+Q KVYVQH + +
Sbjct: 340 ETLLYYGCRRSDEDYLYRE-ELAQFHRDGALTQ-----LNVAFSREQSHKVYVQHLLKQD 393
Query: 357 SQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 416
+ +W L+ A IYV G A M DV +TF +IV++ G A +++K L GRY
Sbjct: 394 REHLWKLIEGGAHIYVCGDARNMARDVQNTFYDIVAELGAMEHAQAVDYIKKLMTKGRYS 453
Query: 417 VEAWS 421
++ WS
Sbjct: 454 LDVWS 458
>pdb|3QE2|A Chain A, Crystal Structure Of Human Nadph-Cytochrome P450 Reductase
pdb|3QE2|B Chain B, Crystal Structure Of Human Nadph-Cytochrome P450 Reductase
Length = 618
Score = 221 bits (563), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 135/425 (31%), Positives = 221/425 (52%), Gaps = 26/425 (6%)
Query: 12 GKLSNYNNKA------VCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEIL 65
G+L +Y N+ FL + G+ + + H E + + I YE GD + +
Sbjct: 205 GRLKSYENQKPPFDAKNPFLAAVTTNRKLNQGTERHLMHLELDISDSKIRYESGDHVAVY 264
Query: 66 PSQDPAAVDTFIQRCNLDPDALITVQHKEMKNYLPDIHKNTTEVPIKLRTFVELTMDVTS 125
P+ D A V+ + D D ++++ + + ++ K+ P RT + +D+T+
Sbjct: 265 PANDSALVNQLGKILGADLDVVMSLNNLDEESN----KKHPFPCPTSYRTALTYYLDITN 320
Query: 126 ASPRRYFFEVMSYFATAEHEKERLQYFASP--EGRDDLYKYNQKERRTVLEVLEDFPSVQ 183
PR ++ +A+ E+E L+ AS EG++ + + RR +L +L+D PS++
Sbjct: 321 P-PRTNVLYELAQYASEPSEQELLRKMASSSGEGKELYLSWVVEARRHILAILQDCPSLR 379
Query: 184 MPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLD 243
PID L +L+P L+ R +SI+SS HPN VH+ VV + T R G+ + WL +
Sbjct: 380 PPIDHLCELLPRLQARYYSIASSSKVHPNSVHICAVVVEYETKAGRINKGVATNWLRAKE 439
Query: 244 P--QQG--IYIPAWFQKGSLPRP-PPSVPLILIGPGTGCAPFRGFVEERA-IQSSSGPAA 297
P + G +P + +K P + P+I++GPGTG APF GF++ERA ++
Sbjct: 440 PVGENGGRALVPMFVRKSQFRLPFKATTPVIMVGPGTGVAPFIGFIQERAWLRQQGKEVG 499
Query: 298 PIIFFFGCRNED-DFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQPQKVYVQHKMLEQ 356
+ ++GCR D D+LYRE L+ DG ++ VAFSR+Q KVYVQH + +
Sbjct: 500 ETLLYYGCRRSDEDYLYRE-ELAQFHRDGALTQ-----LNVAFSREQSHKVYVQHLLKQD 553
Query: 357 SQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 416
+ +W L+ A IYV G A M DV +TF +IV++ G A +++K L GRY
Sbjct: 554 REHLWKLIEGGAHIYVCGDARNMARDVQNTFYDIVAELGAMEHAQAVDYIKKLMTKGRYS 613
Query: 417 VEAWS 421
++ WS
Sbjct: 614 LDVWS 618
>pdb|3QFC|A Chain A, Crystal Structure Of Human Nadph-Cytochrome P450 (V492e
Mutant)
pdb|3QFC|B Chain B, Crystal Structure Of Human Nadph-Cytochrome P450 (V492e
Mutant)
Length = 618
Score = 219 bits (559), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 135/425 (31%), Positives = 220/425 (51%), Gaps = 26/425 (6%)
Query: 12 GKLSNYNNKA------VCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEIL 65
G+L +Y N+ FL + G+ + + H E + + I YE GD + +
Sbjct: 205 GRLKSYENQKPPFDAKNPFLAAVTTNRKLNQGTERHLMHLELDISDSKIRYESGDHVAVY 264
Query: 66 PSQDPAAVDTFIQRCNLDPDALITVQHKEMKNYLPDIHKNTTEVPIKLRTFVELTMDVTS 125
P+ D A V+ + D D ++++ + + ++ K+ P RT + +D+T+
Sbjct: 265 PANDSALVNQLGKILGADLDVVMSLNNLDEESN----KKHPFPCPTSYRTALTYYLDITN 320
Query: 126 ASPRRYFFEVMSYFATAEHEKERLQYFASP--EGRDDLYKYNQKERRTVLEVLEDFPSVQ 183
PR ++ +A+ E+E L+ AS EG++ + + RR +L +L+D PS++
Sbjct: 321 P-PRTNVLYELAQYASEPSEQELLRKMASSSGEGKELYLSWVVEARRHILAILQDCPSLR 379
Query: 184 MPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLD 243
PID L +L+P L+ R +SI+SS HPN VH+ VV + T R G + WL +
Sbjct: 380 PPIDHLCELLPRLQARYYSIASSSKVHPNSVHICAVVVEYETKAGRINKGEATNWLRAKE 439
Query: 244 P--QQG--IYIPAWFQKGSLPRP-PPSVPLILIGPGTGCAPFRGFVEERA-IQSSSGPAA 297
P + G +P + +K P + P+I++GPGTG APF GF++ERA ++
Sbjct: 440 PVGENGGRALVPMFVRKSQFRLPFKATTPVIMVGPGTGVAPFIGFIQERAWLRQQGKEVG 499
Query: 298 PIIFFFGCRNED-DFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQPQKVYVQHKMLEQ 356
+ ++GCR D D+LYRE L+ DG ++ VAFSR+Q KVYVQH + +
Sbjct: 500 ETLLYYGCRRSDEDYLYRE-ELAQFHRDGALTQ-----LNVAFSREQSHKVYVQHLLKQD 553
Query: 357 SQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 416
+ +W L+ A IYV G A M DV +TF +IV++ G A +++K L GRY
Sbjct: 554 REHLWKLIEGGAHIYVCGDARNMARDVQNTFYDIVAELGAMEHAQAVDYIKKLMTKGRYS 613
Query: 417 VEAWS 421
++ WS
Sbjct: 614 LDVWS 618
>pdb|3QFT|A Chain A, Crystal Structure Of Nadph-Cytochrome P450 Reductase
(FadNADPH DOMAIN And R457h Mutant)
Length = 458
Score = 219 bits (558), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 134/425 (31%), Positives = 220/425 (51%), Gaps = 26/425 (6%)
Query: 12 GKLSNYNNKA------VCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEIL 65
G+L +Y N+ FL + G+ + + H E + + I YE GD + +
Sbjct: 45 GRLKSYENQKPPFDAKNPFLAAVTTNRKLNQGTERHLMHLELDISDSKIRYESGDHVAVY 104
Query: 66 PSQDPAAVDTFIQRCNLDPDALITVQHKEMKNYLPDIHKNTTEVPIKLRTFVELTMDVTS 125
P+ D A V+ + D D ++++ + + ++ K+ P RT + +D+T+
Sbjct: 105 PANDSALVNQLGKILGADLDVVMSLNNLDEESN----KKHPFPCPTSYRTALTYYLDITN 160
Query: 126 ASPRRYFFEVMSYFATAEHEKERLQYFASP--EGRDDLYKYNQKERRTVLEVLEDFPSVQ 183
PR ++ +A+ E+E L+ AS EG++ + + RR +L +L+D PS++
Sbjct: 161 -PPRTNVLYELAQYASEPSEQELLRKMASSSGEGKELYLSWVVEARRHILAILQDCPSLR 219
Query: 184 MPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLD 243
PID L +L+P L+ +SI+SS HPN VH+ VV + T R G+ + WL +
Sbjct: 220 PPIDHLCELLPRLQAHYYSIASSSKVHPNSVHICAVVVEYETKAGRINKGVATNWLRAKE 279
Query: 244 P--QQG--IYIPAWFQKGSLPRP-PPSVPLILIGPGTGCAPFRGFVEERA-IQSSSGPAA 297
P + G +P + +K P + P+I++GPGTG APF GF++ERA ++
Sbjct: 280 PVGENGGRALVPMFVRKSQFRLPFKATTPVIMVGPGTGVAPFIGFIQERAWLRQQGKEVG 339
Query: 298 PIIFFFGCRNED-DFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQPQKVYVQHKMLEQ 356
+ ++GCR D D+LYRE L+ DG ++ VAFSR+Q KVYVQH + +
Sbjct: 340 ETLLYYGCRRSDEDYLYRE-ELAQFHRDGALTQ-----LNVAFSREQSHKVYVQHLLKQD 393
Query: 357 SQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 416
+ +W L+ A IYV G A M DV +TF +IV++ G A +++K L GRY
Sbjct: 394 REHLWKLIEGGAHIYVCGDARNMARDVQNTFYDIVAELGAMEHAQAVDYIKKLMTKGRYS 453
Query: 417 VEAWS 421
++ WS
Sbjct: 454 LDVWS 458
>pdb|3QFR|A Chain A, Crystal Structure Of Human Nadph-Cytochrome P450 Reductase
(R457h Mutant)
pdb|3QFR|B Chain B, Crystal Structure Of Human Nadph-Cytochrome P450 Reductase
(R457h Mutant)
Length = 618
Score = 218 bits (556), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 134/425 (31%), Positives = 220/425 (51%), Gaps = 26/425 (6%)
Query: 12 GKLSNYNNKA------VCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEIL 65
G+L +Y N+ FL + G+ + + H E + + I YE GD + +
Sbjct: 205 GRLKSYENQKPPFDAKNPFLAAVTTNRKLNQGTERHLMHLELDISDSKIRYESGDHVAVY 264
Query: 66 PSQDPAAVDTFIQRCNLDPDALITVQHKEMKNYLPDIHKNTTEVPIKLRTFVELTMDVTS 125
P+ D A V+ + D D ++++ + + ++ K+ P RT + +D+T+
Sbjct: 265 PANDSALVNQLGKILGADLDVVMSLNNLDEESN----KKHPFPCPTSYRTALTYYLDITN 320
Query: 126 ASPRRYFFEVMSYFATAEHEKERLQYFASP--EGRDDLYKYNQKERRTVLEVLEDFPSVQ 183
PR ++ +A+ E+E L+ AS EG++ + + RR +L +L+D PS++
Sbjct: 321 P-PRTNVLYELAQYASEPSEQELLRKMASSSGEGKELYLSWVVEARRHILAILQDCPSLR 379
Query: 184 MPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLD 243
PID L +L+P L+ +SI+SS HPN VH+ VV + T R G+ + WL +
Sbjct: 380 PPIDHLCELLPRLQAHYYSIASSSKVHPNSVHICAVVVEYETKAGRINKGVATNWLRAKE 439
Query: 244 P--QQG--IYIPAWFQKGSLPRP-PPSVPLILIGPGTGCAPFRGFVEERA-IQSSSGPAA 297
P + G +P + +K P + P+I++GPGTG APF GF++ERA ++
Sbjct: 440 PAGENGGRALVPMFVRKSQFRLPFKATTPVIMVGPGTGVAPFIGFIQERAWLRQQGKEVG 499
Query: 298 PIIFFFGCRNED-DFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQPQKVYVQHKMLEQ 356
+ ++GCR D D+LYRE L+ DG ++ VAFSR+Q KVYVQH + +
Sbjct: 500 ETLLYYGCRRSDEDYLYRE-ELAQFHRDGALTQ-----LNVAFSREQSHKVYVQHLLKQD 553
Query: 357 SQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 416
+ +W L+ A IYV G A M DV +TF +IV++ G A +++K L GRY
Sbjct: 554 REHLWKLIEGGAHIYVCGDARNMARDVQNTFYDIVAELGAMEHAQAVDYIKKLMTKGRYS 613
Query: 417 VEAWS 421
++ WS
Sbjct: 614 LDVWS 618
>pdb|1AMO|A Chain A, Three-Dimensional Structure Of Nadph-Cytochrome P450
Reductase: Prototype For Fmn-And Fad-Containing Enzymes
pdb|1AMO|B Chain B, Three-Dimensional Structure Of Nadph-Cytochrome P450
Reductase: Prototype For Fmn-And Fad-Containing Enzymes
Length = 615
Score = 214 bits (546), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 134/437 (30%), Positives = 221/437 (50%), Gaps = 27/437 (6%)
Query: 1 MQLETARSMSAGKLSNYNNKA------VCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAI 54
M + + G+L +Y N+ FL + G+ + + H E + + I
Sbjct: 190 MDVAKVYTGEMGRLKSYENQKPPFDAKNPFLAAVTANRKLNQGTERHLMHLELDISDSKI 249
Query: 55 EYEVGDVLEILPSQDPAAVDTFIQRCNLDPDALITVQHKEMKNYLPDIHKNTTEVPIKLR 114
YE GD + + P+ D A V+ + D D ++++ + + ++ K+ P R
Sbjct: 250 RYESGDHVAVYPANDSALVNQIGEILGADLDVIMSLNNLDEESN----KKHPFPCPTTYR 305
Query: 115 TFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASP--EGRDDLYKYNQKERRTV 172
T + +D+T+ PR ++ +A+ E+E L AS EG++ + + RR +
Sbjct: 306 TALTYYLDITNP-PRTNVLYELAQYASEPSEQEHLHKMASSSGEGKELYLSWVVEARRHI 364
Query: 173 LEVLEDFPSVQMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRT 232
L +L+D+PS++ PID L +L+P L+ R +SI+SS HPN VH+ V + R
Sbjct: 365 LAILQDYPSLRPPIDHLCELLPRLQARYYSIASSSKVHPNSVHICAVAVEYEAKSGRVNK 424
Query: 233 GLCSVWLAGLDP--QQG--IYIPAWFQKGSLPRP-PPSVPLILIGPGTGCAPFRGFVEER 287
G+ + WL +P + G +P + +K P + P+I++GPGTG APF GF++ER
Sbjct: 425 GVATSWLRAKEPAGENGGRALVPMFVRKSQFRLPFKSTTPVIMVGPGTGIAPFMGFIQER 484
Query: 288 A-IQSSSGPAAPIIFFFGCRNED-DFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQPQ 345
A ++ + ++GCR D D+LYRE L+ DG ++ VAFSR+Q
Sbjct: 485 AWLREQGKEVGETLLYYGCRRSDEDYLYRE-ELARFHKDGALTQLN-----VAFSREQAH 538
Query: 346 KVYVQHKMLEQSQRIWNLLL-SKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAAN 404
KVYVQH + + +W L+ A IYV G A M DV +TF +IV++ G A +
Sbjct: 539 KVYVQHLLKRDREHLWKLIHEGGAHIYVCGDARNMAKDVQNTFYDIVAEFGPMEHTQAVD 598
Query: 405 WLKALQRAGRYHVEAWS 421
++K L GRY ++ WS
Sbjct: 599 YVKKLMTKGRYSLDVWS 615
>pdb|1JA1|A Chain A, Cypor-Triple Mutant
pdb|1JA1|B Chain B, Cypor-Triple Mutant
Length = 622
Score = 214 bits (545), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 134/437 (30%), Positives = 221/437 (50%), Gaps = 27/437 (6%)
Query: 1 MQLETARSMSAGKLSNYNNKA------VCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAI 54
M + + G+L +Y N+ FL + G+ + + H E + + I
Sbjct: 197 MDVAKVYTGEMGRLKSYENQKPPFDAKNPFLAAVTANRKLNQGTERHLMHLELDISDSKI 256
Query: 55 EYEVGDVLEILPSQDPAAVDTFIQRCNLDPDALITVQHKEMKNYLPDIHKNTTEVPIKLR 114
YE GD + + P+ D A V+ + D D ++++ + + ++ K+ P R
Sbjct: 257 RYESGDHVAVYPANDSALVNQIGEILGADLDVIMSLNNLDEESN----KKHPFPCPTTYR 312
Query: 115 TFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASP--EGRDDLYKYNQKERRTV 172
T + +D+T+ PR ++ +A+ E+E L AS EG++ + + RR +
Sbjct: 313 TALTYYLDITNP-PRTNVLYELAQYASEPSEQEHLHKMASSSGEGKELYLSWVVEARRHI 371
Query: 173 LEVLEDFPSVQMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRT 232
L +L+D+PS++ PID L +L+P L+ R ++I+SS HPN VH+ V + R
Sbjct: 372 LAILQDYPSLRPPIDHLCELLPRLQARYYAIASSSKVHPNSVHICAVAVEYEAKSGRVNK 431
Query: 233 GLCSVWLAGLDP--QQG--IYIPAWFQKGSLPRP-PPSVPLILIGPGTGCAPFRGFVEER 287
G+ + WL +P + G +P + +K P + P+I++GPGTG APF GF++ER
Sbjct: 432 GVATSWLRAKEPAGENGGRALVPMFVRKSQFRLPFKSTTPVIMVGPGTGIAPFMGFIQER 491
Query: 288 A-IQSSSGPAAPIIFFFGCRNED-DFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQPQ 345
A ++ + ++GCR D D+LYRE L+ DG ++ VAFSR+Q
Sbjct: 492 AWLREQGKEVGETLLYYGCRRSDEDYLYRE-ELARFHKDGALTQ-----LNVAFSREQAH 545
Query: 346 KVYVQHKMLEQSQRIWNLLL-SKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAAN 404
KVYVQH + + +W L+ A IYVAG A M DV +TF +IV++ G A +
Sbjct: 546 KVYVQHLLKRDREHLWKLIHEGGAHIYVAGDARNMAKDVQNTFYDIVAEFGPMEHTQAVD 605
Query: 405 WLKALQRAGRYHVEAWS 421
++K L GRY + WS
Sbjct: 606 YVKKLMTKGRYSLNVWS 622
>pdb|3ES9|A Chain A, Nadph-Cytochrome P450 Reductase In An Open Conformation
pdb|3ES9|B Chain B, Nadph-Cytochrome P450 Reductase In An Open Conformation
pdb|3ES9|C Chain C, Nadph-Cytochrome P450 Reductase In An Open Conformation
Length = 618
Score = 214 bits (545), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 134/437 (30%), Positives = 221/437 (50%), Gaps = 27/437 (6%)
Query: 1 MQLETARSMSAGKLSNYNNKA------VCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAI 54
M + + G+L +Y N+ FL + G+ + + H E + + I
Sbjct: 193 MDVAKVYTGEMGRLKSYENQKPPFDAKNPFLAAVTANRKLNQGTERHLMHLELDISDSKI 252
Query: 55 EYEVGDVLEILPSQDPAAVDTFIQRCNLDPDALITVQHKEMKNYLPDIHKNTTEVPIKLR 114
YE GD + + P+ D A V+ + D D ++++ + + ++ K+ P R
Sbjct: 253 RYESGDHVAVYPANDSALVNQIGEILGADLDVIMSLNNLDEESN----KKHPFPCPTTYR 308
Query: 115 TFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASP--EGRDDLYKYNQKERRTV 172
T + +D+T+ PR ++ +A+ E+E L AS EG++ + + RR +
Sbjct: 309 TALTYYLDITNP-PRTNVLYELAQYASEPSEQEHLHKMASSSGEGKELYLSWVVEARRHI 367
Query: 173 LEVLEDFPSVQMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRT 232
L +L+D+PS++ PID L +L+P L+ R +SI+SS HPN VH+ V + R
Sbjct: 368 LAILQDYPSLRPPIDHLCELLPRLQARYYSIASSSKVHPNSVHICAVAVEYEAKSGRVNK 427
Query: 233 GLCSVWLAGLDP--QQG--IYIPAWFQKGSLPRP-PPSVPLILIGPGTGCAPFRGFVEER 287
G+ + WL +P + G +P + +K P + P+I++GPGTG APF GF++ER
Sbjct: 428 GVATSWLRAKEPAGENGGRALVPMFVRKSQFRLPFKSTTPVIMVGPGTGIAPFMGFIQER 487
Query: 288 A-IQSSSGPAAPIIFFFGCRNED-DFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQPQ 345
A ++ + ++GCR D D+LYRE L+ DG ++ VAFSR+Q
Sbjct: 488 AWLREQGKEVGETLLYYGCRRSDEDYLYRE-ELARFHKDGALTQLN-----VAFSREQAH 541
Query: 346 KVYVQHKMLEQSQRIWNLLL-SKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAAN 404
KVYVQH + + +W L+ A IYV G A M DV +TF +IV++ G A +
Sbjct: 542 KVYVQHLLKRDREHLWKLIHEGGAHIYVCGDARNMAKDVQNTFYDIVAEFGPMEHTQAVD 601
Query: 405 WLKALQRAGRYHVEAWS 421
++K L GRY ++ WS
Sbjct: 602 YVKKLMTKGRYSLDVWS 618
>pdb|3OJW|A Chain A, Disulfide Crosslinked Cytochrome P450 Reductase Inactive
pdb|3OJX|A Chain A, Disulfide Crosslinked Cytochrome P450 Reductase Inactive
Length = 622
Score = 212 bits (539), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 134/437 (30%), Positives = 221/437 (50%), Gaps = 27/437 (6%)
Query: 1 MQLETARSMSAGKLSNYNNKA------VCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAI 54
M + + G+L +Y N+ FL + G+ + + H E + + I
Sbjct: 197 MDVAKVYTGEMGRLKSYENQKPPFDAKNPFLAAVTANRKLNQGTERHLMHLELDISDSKI 256
Query: 55 EYEVGDVLEILPSQDPAAVDTFIQRCNLDPDALITVQHKEMKNYLPDIHKNTTEVPIKLR 114
YE GD + + P+ D A V+ + D D ++++ + + ++ K+ P R
Sbjct: 257 RYESGDHVAVYPANDSALVNQIGEILGADLDVIMSLNNLDEESN----KKHPFPTPTTYR 312
Query: 115 TFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASP--EGRDDLYKYNQKERRTV 172
T + +D+T+ PR ++ +A+ E+E L AS EG++ + + RR +
Sbjct: 313 TALTYYLDITNP-PRTNVLYELAQYASEPSEQEHLHKMASSSGEGKELYLSWVVEARRHI 371
Query: 173 LEVLEDFPSVQMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRT 232
L +L+D+PS++ PID L++L+P L+ R +SI+SS HPN VH+T V + R
Sbjct: 372 LAILQDYPSLRPPIDHLLELLPRLQARYYSIASSSKVHPNSVHITAVAVEYEAKSGRVNK 431
Query: 233 GLCSVWLAGLDP--QQG--IYIPAWFQKGSLPRP-PPSVPLILIGPGTGCAPFRGFVEER 287
G+ + WL +P + G +P + K P + P+I++GPGTG APF GF++ER
Sbjct: 432 GVATSWLRAKEPAGENGGRALVPMFVCKSQFRLPFKSTTPVIMVGPGTGIAPFMGFIQER 491
Query: 288 A-IQSSSGPAAPIIFFFGCRNED-DFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQPQ 345
A ++ + ++G R D D+LYRE L+ DG ++ VAFSR+Q
Sbjct: 492 AWLREQGKEVGETLLYYGARRSDEDYLYRE-ELARFHKDGALTQ-----LNVAFSREQAH 545
Query: 346 KVYVQHKMLEQSQRIWNLLL-SKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAAN 404
KVYVQH + + +W L+ A IYV G A M DV +TF +IV++ G A +
Sbjct: 546 KVYVQHLLKRDREHLWKLIHEGGAHIYVCGDARNMAKDVQNTFYDIVAEFGPMEHTQAVD 605
Query: 405 WLKALQRAGRYHVEAWS 421
++K L GRY ++ WS
Sbjct: 606 YVKKLMTKGRYSLDVWS 622
>pdb|1J9Z|A Chain A, Cypor-W677g
pdb|1J9Z|B Chain B, Cypor-W677g
Length = 622
Score = 210 bits (534), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 133/437 (30%), Positives = 220/437 (50%), Gaps = 27/437 (6%)
Query: 1 MQLETARSMSAGKLSNYNNKA------VCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAI 54
M + + G+L +Y N+ FL + G+ + + H E + + I
Sbjct: 197 MDVAKVYTGEMGRLKSYENQKPPFDAKNPFLAAVTANRKLNQGTERHLMHLELDISDSKI 256
Query: 55 EYEVGDVLEILPSQDPAAVDTFIQRCNLDPDALITVQHKEMKNYLPDIHKNTTEVPIKLR 114
YE GD + + P+ D A V+ + D D ++++ + + ++ K+ P R
Sbjct: 257 RYESGDHVAVYPANDSALVNQIGEILGADLDVIMSLNNLDEESN----KKHPFPCPTTYR 312
Query: 115 TFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASP--EGRDDLYKYNQKERRTV 172
T + +D+T+ PR ++ +A+ E+E L AS EG++ + + RR +
Sbjct: 313 TALTYYLDITNP-PRTNVLYELAQYASEPSEQEHLHKMASSSGEGKELYLSWVVEARRHI 371
Query: 173 LEVLEDFPSVQMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRT 232
L +L+D+PS++ PID L +L+P L+ R +SI+SS HPN VH+ V + R
Sbjct: 372 LAILQDYPSLRPPIDHLCELLPRLQARYYSIASSSKVHPNSVHICAVAVEYEAKSGRVNK 431
Query: 233 GLCSVWLAGLDP--QQG--IYIPAWFQKGSLPRP-PPSVPLILIGPGTGCAPFRGFVEER 287
G+ + WL +P + G +P + +K P + P+I++GPGTG APF GF++ER
Sbjct: 432 GVATSWLRAKEPAGENGGRALVPMFVRKSQFRLPFKSTTPVIMVGPGTGIAPFMGFIQER 491
Query: 288 A-IQSSSGPAAPIIFFFGCRNED-DFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQPQ 345
A ++ + ++GCR D D+LYRE L+ DG ++ VAFSR+Q
Sbjct: 492 AWLREQGKEVGETLLYYGCRRSDEDYLYRE-ELARFHKDGALTQ-----LNVAFSREQAH 545
Query: 346 KVYVQHKMLEQSQRIWNLLL-SKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAAN 404
KVYVQH + + +W L+ A IYV G A M DV +TF +IV++ G A +
Sbjct: 546 KVYVQHLLKRDREHLWKLIHEGGAHIYVCGDARNMAKDVQNTFYDIVAEFGPMEHTQAVD 605
Query: 405 WLKALQRAGRYHVEAWS 421
++K L GRY ++ S
Sbjct: 606 YVKKLMTKGRYSLDVGS 622
>pdb|1JA0|A Chain A, Cypor-W677x
pdb|1JA0|B Chain B, Cypor-W677x
Length = 620
Score = 209 bits (532), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 132/434 (30%), Positives = 219/434 (50%), Gaps = 27/434 (6%)
Query: 1 MQLETARSMSAGKLSNYNNKA------VCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAI 54
M + + G+L +Y N+ FL + G+ + + H E + + I
Sbjct: 197 MDVAKVYTGEMGRLKSYENQKPPFDAKNPFLAAVTANRKLNQGTERHLMHLELDISDSKI 256
Query: 55 EYEVGDVLEILPSQDPAAVDTFIQRCNLDPDALITVQHKEMKNYLPDIHKNTTEVPIKLR 114
YE GD + + P+ D A V+ + D D ++++ + + ++ K+ P R
Sbjct: 257 RYESGDHVAVYPANDSALVNQIGEILGADLDVIMSLNNLDEESN----KKHPFPCPTTYR 312
Query: 115 TFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASP--EGRDDLYKYNQKERRTV 172
T + +D+T+ PR ++ +A+ E+E L AS EG++ + + RR +
Sbjct: 313 TALTYYLDITNP-PRTNVLYELAQYASEPSEQEHLHKMASSSGEGKELYLSWVVEARRHI 371
Query: 173 LEVLEDFPSVQMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRT 232
L +L+D+PS++ PID L +L+P L+ R +SI+SS HPN VH+ V + R
Sbjct: 372 LAILQDYPSLRPPIDHLCELLPRLQARYYSIASSSKVHPNSVHICAVAVEYEAKSGRVNK 431
Query: 233 GLCSVWLAGLDP--QQG--IYIPAWFQKGSLPRP-PPSVPLILIGPGTGCAPFRGFVEER 287
G+ + WL +P + G +P + +K P + P+I++GPGTG APF GF++ER
Sbjct: 432 GVATSWLRAKEPAGENGGRALVPMFVRKSQFRLPFKSTTPVIMVGPGTGIAPFMGFIQER 491
Query: 288 A-IQSSSGPAAPIIFFFGCRNED-DFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQPQ 345
A ++ + ++GCR D D+LYRE L+ DG ++ VAFSR+Q
Sbjct: 492 AWLREQGKEVGETLLYYGCRRSDEDYLYRE-ELARFHKDGALTQLN-----VAFSREQAH 545
Query: 346 KVYVQHKMLEQSQRIWNLLL-SKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAAN 404
KVYVQH + + +W L+ A IYV G A M DV +TF +IV++ G A +
Sbjct: 546 KVYVQHLLKRDREHLWKLIHEGGAHIYVCGDARNMAKDVQNTFYDIVAEFGPMEHTQAVD 605
Query: 405 WLKALQRAGRYHVE 418
++K L GRY ++
Sbjct: 606 YVKKLMTKGRYSLD 619
>pdb|1TLL|A Chain A, Crystal Structure Of Rat Neuronal Nitric-Oxide Synthase
Reductase Module At 2.3 A Resolution.
pdb|1TLL|B Chain B, Crystal Structure Of Rat Neuronal Nitric-Oxide Synthase
Reductase Module At 2.3 A Resolution
Length = 688
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 136/423 (32%), Positives = 215/423 (50%), Gaps = 35/423 (8%)
Query: 14 LSNYNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFV-SAAIEYEVGDVLEILPSQDPAA 72
LSN + K V +++ Q L S + + ++Y+ GD L + P
Sbjct: 243 LSNVHKKRVSAARLLSRQNLQSPKSSRSTIFVRLHTNGNQELQYQPGDHLGVFPGNHEDL 302
Query: 73 VDTFIQRCNLDPDA--LITVQHKEMKNYLPDIHKNTTEV----PIKLRTFVELTMDVTSA 126
V+ I+R P A ++ V+ E +N + N + P + + +D+T+
Sbjct: 303 VNALIERLEDAPPANHVVKVEMLEERNTALGVISNWKDESRLPPCTIFQAFKYYLDITTP 362
Query: 127 SPRRYFFEVMSYFATAEHEKERLQYFASPEGRDDLYKYNQKERRTVLEVLEDFPSVQMPI 186
P + + AT E EK+RL + +G + ++ + T++EVLE+FPS+QMP
Sbjct: 363 -PTPLQLQQFASLATNEKEKQRLLVLS--KGLQEYEEWKWGKNPTMVEVLEEFPSIQMPA 419
Query: 187 DWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRK--RTGLCSVWLAGLDP 244
L+ + L+ R +SISSSP +P++VHLTV++VS+ T G+CS WL +
Sbjct: 420 TLLLTQLSLLQPRYYSISSSPDMYPDEVHLTVAIVSYHTRDGEGPVHHGVCSSWLNRI-- 477
Query: 245 QQGIYIPAWFQKGS----LPRPPPSVPLILIGPGTGCAPFRGFVEERA--IQSSSGPAAP 298
Q +P F +G+ LPR P VP IL+GPGTG APFR F ++R IQ P
Sbjct: 478 QADDVVPC-FVRGAPSFHLPR-NPQVPCILVGPGTGIAPFRSFWQQRQFDIQHKGMNPCP 535
Query: 299 IIFFFGCRNED-DFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRK--QPQKVYVQHKMLE 355
++ FGCR D +YRE L + N GVF E Y A+SR+ +P+K YVQ + E
Sbjct: 536 MVLVFGCRQSKIDHIYREETL-QAKNKGVFRE-----LYTAYSREPDRPKK-YVQDVLQE 588
Query: 356 Q-SQRIWNLLLSKAS-IYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAG 413
Q ++ ++ L + IYV G T M +DV + I++++G+ S + A ++ L+
Sbjct: 589 QLAESVYRALKEQGGHIYVCGDVT-MAADVLKAIQRIMTQQGKLSEEDAGVFISRLRDDN 647
Query: 414 RYH 416
RYH
Sbjct: 648 RYH 650
>pdb|1F20|A Chain A, Crystal Structure Of Rat Neuronal Nitric-Oxide Synthase
FadNADP+ Domain At 1.9a Resolution
Length = 435
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 136/423 (32%), Positives = 215/423 (50%), Gaps = 35/423 (8%)
Query: 14 LSNYNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFV-SAAIEYEVGDVLEILPSQDPAA 72
LSN + K V +++ Q L S + + ++Y+ GD L + P
Sbjct: 22 LSNVHKKRVSAARLLSRQNLQSPKSSRSTIFVRLHTNGNQELQYQPGDHLGVFPGNHEDL 81
Query: 73 VDTFIQRCNLDPDA--LITVQHKEMKNYLPDIHKNTTEV----PIKLRTFVELTMDVTSA 126
V+ I+R P A ++ V+ E +N + N + P + + +D+T+
Sbjct: 82 VNALIERLEDAPPANHVVKVEMLEERNTALGVISNWKDESRLPPCTIFQAFKYYLDITTP 141
Query: 127 SPRRYFFEVMSYFATAEHEKERLQYFASPEGRDDLYKYNQKERRTVLEVLEDFPSVQMPI 186
P + + AT E EK+RL + +G + ++ + T++EVLE+FPS+QMP
Sbjct: 142 -PTPLQLQQFASLATNEKEKQRLLVLS--KGLQEYEEWKWGKNPTMVEVLEEFPSIQMPA 198
Query: 187 DWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRK--RTGLCSVWLAGLDP 244
L+ + L+ R +SISSSP +P++VHLTV++VS+ T G+CS WL +
Sbjct: 199 TLLLTQLSLLQPRYYSISSSPDMYPDEVHLTVAIVSYHTRDGEGPVHHGVCSSWLNRI-- 256
Query: 245 QQGIYIPAWFQKGS----LPRPPPSVPLILIGPGTGCAPFRGFVEERA--IQSSSGPAAP 298
Q +P F +G+ LPR P VP IL+GPGTG APFR F ++R IQ P
Sbjct: 257 QADDVVPC-FVRGAPSFHLPR-NPQVPCILVGPGTGIAPFRSFWQQRQFDIQHKGMNPCP 314
Query: 299 IIFFFGCRNED-DFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRK--QPQKVYVQHKMLE 355
++ FGCR D +YRE L + N GVF E Y A+SR+ +P+K YVQ + E
Sbjct: 315 MVLVFGCRQSKIDHIYREETL-QAKNKGVFRE-----LYTAYSREPDRPKK-YVQDVLQE 367
Query: 356 Q-SQRIWNLLLSKAS-IYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAG 413
Q ++ ++ L + IYV G T M +DV + I++++G+ S + A ++ L+
Sbjct: 368 QLAESVYRALKEQGGHIYVCGDVT-MAADVLKAIQRIMTQQGKLSEEDAGVFISRLRDDN 426
Query: 414 RYH 416
RYH
Sbjct: 427 RYH 429
>pdb|4DQK|A Chain A, Crystal Structure Of The Fad Binding Domain Of Cytochrome
P450 Bm3
pdb|4DQK|B Chain B, Crystal Structure Of The Fad Binding Domain Of Cytochrome
P450 Bm3
Length = 391
Score = 158 bits (400), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 128/408 (31%), Positives = 201/408 (49%), Gaps = 39/408 (9%)
Query: 27 MIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQDPAAVDTFIQRCNLDPDA 86
++ ++ L + GS + H E E A Y+ GD L ++P V+ R LD
Sbjct: 9 VVASKELQQPGSARSTRHLEIELPKEA-SYQEGDHLGVIPRNYEGIVNRVTARFGLDASQ 67
Query: 87 LITVQHKEMK-NYLPDIHKNTTEVPIKLRTFVELTMDVTSASPRRYFFEVMSYFATAEHE 145
I ++ +E K +LP + E +L +VEL VT R M+ A
Sbjct: 68 QIRLEAEEEKLAHLPLAKTVSVE---ELLQYVELQDPVT-----RTQLRAMAAKTVAPPH 119
Query: 146 KERLQYFASPEGRDDLYKYNQKERR-TVLEVLEDFPSVQMPIDWLVQLVPPLKTRAFSIS 204
K L+ + YK +R T+LE+LE +P+ +M + L+P ++ R +SIS
Sbjct: 120 KVELEALLEKQA----YKEQVLAKRLTMLELLEKYPACEMKFSEFIALLPSIRPRYYSIS 175
Query: 205 SSPLAHPNQVHLTVSVVS---WTTPYKRKRTGLCSVWLAGLDPQQGIYIPAWF----QKG 257
SSP Q +TVSVVS W+ + K G+ S +LA L Q+G I + +
Sbjct: 176 SSPRVDEKQASITVSVVSGEAWSGYGEYK--GIASNYLAEL--QEGDTITCFISTPQSEF 231
Query: 258 SLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPA-APIIFFFGCRN-EDDFLYRE 315
+LP+ P + PLI++GPGTG APFRGFV+ R G + +FGCR+ +D+LY+E
Sbjct: 232 TLPKDPET-PLIMVGPGTGVAPFRGFVQARKQLKEQGQSLGEAHLYFGCRSPHEDYLYQE 290
Query: 316 LWLSHSLNDGVFSEAKGGGFYVAFSR--KQPQKVYVQHKMLEQSQRIWNLLLSKASIYVA 373
L ++ ++G+ + + AFSR QP K YVQH M + +++ LL A Y+
Sbjct: 291 -ELENAQSEGIIT------LHTAFSRMPNQP-KTYVQHVMEQDGKKLIELLDQGAHFYIC 342
Query: 374 GSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYHVEAWS 421
G ++M V +T + + + S A WL+ L+ GRY + W+
Sbjct: 343 GDGSQMAPAVEATLMKSYADVHQVSEADARLWLQQLEEKGRYAKDVWA 390
>pdb|4DQL|A Chain A, Crystal Structure Of The Fad Binding Domain Of Cytochrome
P450 Bm3 In Complex With Nadp+
pdb|4DQL|B Chain B, Crystal Structure Of The Fad Binding Domain Of Cytochrome
P450 Bm3 In Complex With Nadp+
Length = 393
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 127/408 (31%), Positives = 200/408 (49%), Gaps = 39/408 (9%)
Query: 27 MIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQDPAAVDTFIQRCNLDPDA 86
++ ++ L + GS + H E E A Y+ GD L ++P V+ R LD
Sbjct: 11 VVASKELQQPGSARSTRHLEIELPKEA-SYQEGDHLGVIPRNYEGIVNRVTARFGLDASQ 69
Query: 87 LITVQHKEMK-NYLPDIHKNTTEVPIKLRTFVELTMDVTSASPRRYFFEVMSYFATAEHE 145
I ++ +E K +LP + E +L +VEL VT R M+
Sbjct: 70 QIRLEAEEEKLAHLPLAKTVSVE---ELLQYVELQDPVT-----RTQLRAMAAKTVCPPH 121
Query: 146 KERLQYFASPEGRDDLYKYNQKERR-TVLEVLEDFPSVQMPIDWLVQLVPPLKTRAFSIS 204
K L+ + YK +R T+LE+LE +P+ +M + L+P ++ R +SIS
Sbjct: 122 KVELEALLEKQA----YKEQVLAKRLTMLELLEKYPACEMKFSEFIALLPSIRPRYYSIS 177
Query: 205 SSPLAHPNQVHLTVSVVS---WTTPYKRKRTGLCSVWLAGLDPQQGIYIPAWF----QKG 257
SSP Q +TVSVVS W+ + K G+ S +LA L Q+G I + +
Sbjct: 178 SSPRVDEKQASITVSVVSGEAWSGYGEYK--GIASNYLAEL--QEGDTITCFISTPQSEF 233
Query: 258 SLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPA-APIIFFFGCRN-EDDFLYRE 315
+LP+ P + PLI++GPGTG APFRGFV+ R G + +FGCR+ +D+LY+E
Sbjct: 234 TLPKDPET-PLIMVGPGTGVAPFRGFVQARKQLKEQGQSLGEAHLYFGCRSPHEDYLYQE 292
Query: 316 LWLSHSLNDGVFSEAKGGGFYVAFSR--KQPQKVYVQHKMLEQSQRIWNLLLSKASIYVA 373
L ++ ++G+ + + AFSR QP K YVQH M + +++ LL A Y+
Sbjct: 293 -ELENAQSEGIIT------LHTAFSRMPNQP-KTYVQHVMEQDGKKLIELLDQGAHFYIC 344
Query: 374 GSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYHVEAWS 421
G ++M V +T + + + S A WL+ L+ GRY + W+
Sbjct: 345 GDGSQMAPAVEATLMKSYADVHQVSEADARLWLQQLEEKGRYAKDVWA 392
>pdb|1DDG|A Chain A, Crystal Structure Of Sir-Fp60
pdb|1DDG|B Chain B, Crystal Structure Of Sir-Fp60
pdb|1DDI|A Chain A, Crystal Structure Of Sir-Fp60
Length = 374
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 117/408 (28%), Positives = 186/408 (45%), Gaps = 39/408 (9%)
Query: 15 SNYNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQDPAAVD 74
S Y+ A + NQ +T S KDV H E + + + Y+ GD L + DPA V
Sbjct: 4 SPYSKDAPLVASLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVK 63
Query: 75 TFIQRCNLDPDALITVQHKEMKNYLPDIHKNTTEVPIKLRTFVELTMDVTSASPRRYFFE 134
++ L D +TV+ K T + L+ ELT++ +
Sbjct: 64 ELVELLWLKGDEPVTVEGK------------TLPLNEALQWHFELTVNTANIVENYATLT 111
Query: 135 VMSYFATAEHEKERLQYFASPEGRDDLYKYNQKERRTVLEVLEDFPSVQMPIDWLVQLVP 194
+K +LQ++A+ D+ + F Q+ + L+ L+
Sbjct: 112 RSETLLPLVGDKAKLQHYAATTPIVDMVR---------------FSPAQLDAEALINLLR 156
Query: 195 PLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIPAWF 254
PL R +SI+SS N+VH+TV VV + R R G S +LA ++G + +
Sbjct: 157 PLTPRLYSIASSQAEVENEVHVTVGVVRYDVE-GRARAGGASSFLADRVEEEG-EVRVFI 214
Query: 255 QKGSLPRPP--PSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFL 312
+ R P P P+I+IGPGTG APFR F+++RA + P +FF +DFL
Sbjct: 215 EHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQRA--ADEAPGKNWLFFGNPHFTEDFL 272
Query: 313 YRELWLSHSLNDGVFSEAKGGGFYVAFSRKQPQKVYVQHKMLEQSQRIWNLLLSKASIYV 372
Y+ W + + +GV + +A+SR Q +KVYVQ K+ EQ +W + A IYV
Sbjct: 273 YQVEWQRY-VKEGVLTRID-----LAWSRDQKEKVYVQDKLREQGAELWRWINDGAHIYV 326
Query: 373 AGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYHVEAW 420
G A +M DV E++++ G ++A +L L+ RY + +
Sbjct: 327 CGDANRMAKDVEQALLEVIAEFGGMDTEAADEFLSELRVERRYQRDVY 374
>pdb|2QTZ|A Chain A, Crystal Structure Of The Nadp+-Bound Fad-Containing
Fnr-Like Module Of Human Methionine Synthase Reductase
Length = 539
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 121/427 (28%), Positives = 190/427 (44%), Gaps = 50/427 (11%)
Query: 33 LTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQDPAAVDTFIQRCNLDPDALITVQH 92
LT + + K E + + Y+ GD ++ + V + +QR L+ +H
Sbjct: 125 LTTNDAIKTTLLVELDISNTDFSYQPGDAFSVICPNSDSEVQSLLQRLQLEDKR----EH 180
Query: 93 KEMKNYLPDIHKNTTEVPIKLRTFVELTMDVT-----SASPRRYFFEVMSYFATAEHEKE 147
+ D K +P + L T A P++ F + + + EK
Sbjct: 181 XVLLKIKADTKKKGATLPQHIPAGCSLQFIFTWCLEIRAIPKKAFLRALVDYTSDSAEKR 240
Query: 148 RLQYFASPEGRDDLYKYNQKERRTVLEVLEDFPSVQMPIDWLVQLVPPLKTRAFSISSSP 207
RLQ S +G D ++ + +L++L FPS Q P+ L++ +P L+ R +S +SS
Sbjct: 241 RLQELCSKQGAADYSRFVRDAXACLLDLLLAFPSCQPPLSLLLEHLPKLQPRPYSCASSS 300
Query: 208 LAHPNQVHLTVSVVSW--TTPYKRKRTGLCSVWLA--------------------GLDPQ 245
L HP ++H ++V + T + R G+C+ WLA L P+
Sbjct: 301 LFHPGKLHFVFNIVEFLSTATTEVLRKGVCTGWLALLVASVLQPNIHASHEDSGKALAPK 360
Query: 246 QGIYIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAI---QSSSGPAAPIIFF 302
I+ P LP PS+P+I++GPGTG APF GF++ R Q G + F
Sbjct: 361 ISIF-PRTTNSFHLPD-DPSIPIIMVGPGTGIAPFIGFLQHREKLQEQHPDGNFGAMWLF 418
Query: 303 FGCRNED-DFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQP------QKVYVQHKMLE 355
FGCR++D D+L+R+ L H L G+ + K V+FSR P YVQ +
Sbjct: 419 FGCRHKDRDYLFRK-ELRHFLKHGILTHLK-----VSFSRDAPVGEEEAPAKYVQDNIQL 472
Query: 356 QSQRIWNLLLSK-ASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGR 414
Q++ +LL + IYV G A M DV +I+SKE + A L L+ R
Sbjct: 473 HGQQVARILLQENGHIYVCGDAKNMAKDVHDALVQIISKEVGVEKLEAMKTLATLKEEKR 532
Query: 415 YHVEAWS 421
Y + WS
Sbjct: 533 YLQDIWS 539
>pdb|2QTL|A Chain A, Crystal Structure Of The Fad-Containing Fnr-Like Module Of
Human Methionine Synthase Reductase
Length = 539
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 121/427 (28%), Positives = 190/427 (44%), Gaps = 50/427 (11%)
Query: 33 LTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQDPAAVDTFIQRCNLDPDALITVQH 92
LT + + K E + + Y+ GD ++ + V + +QR L+ +H
Sbjct: 125 LTTNDAIKTTLLVELDISNTDFSYQPGDAFSVICPNSDSEVQSLLQRLQLEDKR----EH 180
Query: 93 KEMKNYLPDIHKNTTEVPIKLRTFVELTMDVT-----SASPRRYFFEVMSYFATAEHEKE 147
+ D K +P + L T A P++ F + + + EK
Sbjct: 181 XVLLKIKADTKKKGATLPQHIPAGXSLQFIFTWCLEIRAIPKKAFLRALVDYTSDSAEKR 240
Query: 148 RLQYFASPEGRDDLYKYNQKERRTVLEVLEDFPSVQMPIDWLVQLVPPLKTRAFSISSSP 207
RLQ S +G D ++ + +L++L FPS Q P+ L++ +P L+ R +S +SS
Sbjct: 241 RLQELCSKQGAADYSRFVRDAXACLLDLLLAFPSCQPPLSLLLEHLPKLQPRPYSCASSS 300
Query: 208 LAHPNQVHLTVSVVSW--TTPYKRKRTGLCSVWLA--------------------GLDPQ 245
L HP ++H ++V + T + R G+C+ WLA L P+
Sbjct: 301 LFHPGKLHFVFNIVEFLSTATTEVLRKGVCTGWLALLVASVLQPNIHASHEDSGKALAPK 360
Query: 246 QGIYIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAI---QSSSGPAAPIIFF 302
I+ P LP PS+P+I++GPGTG APF GF++ R Q G + F
Sbjct: 361 ISIF-PRTTNSFHLPD-DPSIPIIMVGPGTGIAPFIGFLQHREKLQEQHPDGNFGAMWLF 418
Query: 303 FGCRNED-DFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQP------QKVYVQHKMLE 355
FGCR++D D+L+R+ L H L G+ + K V+FSR P YVQ +
Sbjct: 419 FGCRHKDRDYLFRK-ELRHFLKHGILTHLK-----VSFSRDAPVGEEEAPAKYVQDNIQL 472
Query: 356 QSQRIWNLLLSK-ASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGR 414
Q++ +LL + IYV G A M DV +I+SKE + A L L+ R
Sbjct: 473 HGQQVARILLQENGHIYVCGDAKNMAKDVHDALVQIISKEVGVEKLEAMKTLATLKEEKR 532
Query: 415 YHVEAWS 421
Y + WS
Sbjct: 533 YLQDIWS 539
>pdb|2BF4|A Chain A, A Second Fmn-Binding Site In Yeast Nadph-Cytochrome P450
Reductase Suggests A Novel Mechanism Of Electron
Transfer By Diflavin Reductases.
pdb|2BF4|B Chain B, A Second Fmn-Binding Site In Yeast Nadph-Cytochrome P450
Reductase Suggests A Novel Mechanism Of Electron
Transfer By Diflavin Reductases.
pdb|2BN4|A Chain A, A Second Fmn-Binding Site In Yeast Nadph-Cytochrome P450
Reductase Suggests A Novel Mechanism Of Electron
Transfer By Diflavin Reductase
pdb|2BN4|B Chain B, A Second Fmn-Binding Site In Yeast Nadph-Cytochrome P450
Reductase Suggests A Novel Mechanism Of Electron
Transfer By Diflavin Reductase
Length = 682
Score = 127 bits (320), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 115/426 (26%), Positives = 189/426 (44%), Gaps = 56/426 (13%)
Query: 36 SGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQDPAAVDTFIQRCNLDPDALITVQHKEM 95
S + ++ H EF+ + I+Y GD L + PS V+ F+ NLDP+ + ++ +
Sbjct: 272 SSNDRNCIHSEFDLSGSNIKYSTGDHLAVWPSNPLEKVEQFLSIFNLDPETIFDLKPLDP 331
Query: 96 KNYLPDIHKNTTEVPIKLRTFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASP 155
+P T + ++ ++E+T V+ R F + FA KE+L +
Sbjct: 332 TVKVP--FPTPTTIGAAIKHYLEITGPVS-----RQLFSSLIQFAPNADVKEKLTLLS-- 382
Query: 156 EGRDDLYKYNQKERRTVLEVLEDFPSV----QMPIDWLVQLVPPLKTRAFSISSSPLAHP 211
+ +D + + + L+ +P+ +LV+ VP + R +SISSS L+
Sbjct: 383 KDKDQFAVEITSKYFNIADALKYLSDGAKWDTVPMQFLVESVPQMTPRYYSISSSSLSEK 442
Query: 212 NQVHLTVSVVSWTTPYKRKR---TGLCSVWLAGLDPQQG--------------------- 247
VH+T V ++ P G+ + L + Q
Sbjct: 443 QTVHVTSIVENFPNPELPDAPPVVGVTTNLLRNIQLAQNNVNIAETNLPVHYDLNGPRKL 502
Query: 248 ---IYIPAWFQKGSLPRPP-PSVPLILIGPGTGCAPFRGFVEERAI----QSSSGPAAPI 299
+P ++ + P PS P+I+IGPGTG APFRGF+ ER Q G +
Sbjct: 503 FANYKLPVHVRRSNFRLPSNPSTPVIMIGPGTGVAPFRGFIRERVAFLESQKKGGNNVSL 562
Query: 300 ---IFFFGCRNEDDFLYRELWLSHSLN-DGVFSEAKGGGFYVAFSR-KQPQKVYVQHKML 354
I F+G RN DDFLY++ W ++ DG F VA SR +KVYVQ K+
Sbjct: 563 GKHILFYGSRNTDDFLYQDEWPEYAKKLDGSFE------MVVAHSRLPNTKKVYVQDKLK 616
Query: 355 EQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGR 414
+ +++ ++ + A IYV G A M V + I+S+ + D A +K L+ +GR
Sbjct: 617 DYEDQVFEMINNGAFIYVCGDAKGMAKGVSTALVGILSRGKSITTDEATELIKMLKTSGR 676
Query: 415 YHVEAW 420
Y + W
Sbjct: 677 YQEDVW 682
>pdb|2BPO|A Chain A, Crystal Structure Of The Yeast Cpr Triple Mutant: D74g,
Y75f, K78a.
pdb|2BPO|B Chain B, Crystal Structure Of The Yeast Cpr Triple Mutant: D74g,
Y75f, K78a
Length = 682
Score = 127 bits (320), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 115/426 (26%), Positives = 189/426 (44%), Gaps = 56/426 (13%)
Query: 36 SGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQDPAAVDTFIQRCNLDPDALITVQHKEM 95
S + ++ H EF+ + I+Y GD L + PS V+ F+ NLDP+ + ++ +
Sbjct: 272 SSNDRNCIHSEFDLSGSNIKYSTGDHLAVWPSNPLEKVEQFLSIFNLDPETIFDLKPLDP 331
Query: 96 KNYLPDIHKNTTEVPIKLRTFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASP 155
+P T + ++ ++E+T V+ R F + FA KE+L +
Sbjct: 332 TVKVP--FPTPTTIGAAIKHYLEITGPVS-----RQLFSSLIQFAPNADVKEKLTLLS-- 382
Query: 156 EGRDDLYKYNQKERRTVLEVLEDFPSV----QMPIDWLVQLVPPLKTRAFSISSSPLAHP 211
+ +D + + + L+ +P+ +LV+ VP + R +SISSS L+
Sbjct: 383 KDKDQFAVEITSKYFNIADALKYLSDGAKWDTVPMQFLVESVPQMTPRYYSISSSSLSEK 442
Query: 212 NQVHLTVSVVSWTTPYKRKR---TGLCSVWLAGLDPQQG--------------------- 247
VH+T V ++ P G+ + L + Q
Sbjct: 443 QTVHVTSIVENFPNPELPDAPPVVGVTTNLLRNIQLAQNNVNIAETNLPVHYDLNGPRKL 502
Query: 248 ---IYIPAWFQKGSLPRPP-PSVPLILIGPGTGCAPFRGFVEERAI----QSSSGPAAPI 299
+P ++ + P PS P+I+IGPGTG APFRGF+ ER Q G +
Sbjct: 503 FANYKLPVHVRRSNFRLPSNPSTPVIMIGPGTGVAPFRGFIRERVAFLESQKKGGNNVSL 562
Query: 300 ---IFFFGCRNEDDFLYRELWLSHSLN-DGVFSEAKGGGFYVAFSR-KQPQKVYVQHKML 354
I F+G RN DDFLY++ W ++ DG F VA SR +KVYVQ K+
Sbjct: 563 GKHILFYGSRNTDDFLYQDEWPEYAKKLDGSFE------MVVAHSRLPNTKKVYVQDKLK 616
Query: 355 EQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGR 414
+ +++ ++ + A IYV G A M V + I+S+ + D A +K L+ +GR
Sbjct: 617 DYEDQVFEMINNGAFIYVCGDAKGMAKGVSTALVGILSRGKSITTDEATELIKMLKTSGR 676
Query: 415 YHVEAW 420
Y + W
Sbjct: 677 YQEDVW 682
>pdb|3VO1|A Chain A, Crystal Structure Of Zea Mays Leaf Ferredoxin-Nadp+
Reductase Ii
pdb|3VO1|B Chain B, Crystal Structure Of Zea Mays Leaf Ferredoxin-Nadp+
Reductase Ii
Length = 314
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 104/244 (42%), Gaps = 36/244 (14%)
Query: 195 PLKTRAFSISSSPLAH---PNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIP 251
P K R +SI+SS L V L V + +T G+CS +L L P + I
Sbjct: 89 PHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNDQGEVVKGVCSNFLCDLKPGAEVKIT 148
Query: 252 AWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFV-----EERAIQSSSGPAAPIIFFFGCR 306
K L P+ +I++ GTG APFR F+ EE +G A F G
Sbjct: 149 GPVGKEMLMPKDPNATIIMLATGTGIAPFRSFLWKMFFEEHEDYKYTGLA---WLFLGVP 205
Query: 307 NEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAF--SRKQP----QKVYVQHKMLEQSQRI 360
D LY+E E F + F SR+Q +K+Y+Q +M E + +
Sbjct: 206 TSDTLLYKEELEK-------MKEMAPDNFRLDFAVSREQTNAAGEKMYIQTRMAEYKEEL 258
Query: 361 WNLLLSKASIYVAGSATK-MPSDVWSTFEEIVSKEGEASRDSAANWL---KALQRAGRYH 416
W LL K + YV K M + ++ +K+G NWL K L+++ +++
Sbjct: 259 WE-LLKKDNTYVYMCGLKGMEKGIDDIMLDLAAKDG-------INWLDYKKQLKKSEQWN 310
Query: 417 VEAW 420
VE +
Sbjct: 311 VEVY 314
>pdb|3VO2|A Chain A, Crystal Structure Of Zea Mays Leaf Ferredoxin-Nadp+
Reductase Iii
pdb|3VO2|B Chain B, Crystal Structure Of Zea Mays Leaf Ferredoxin-Nadp+
Reductase Iii
Length = 310
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 102/244 (41%), Gaps = 36/244 (14%)
Query: 195 PLKTRAFSISSSPLAH---PNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIP 251
P K R +SI+SS L V L V + +T G+CS +L L P + I
Sbjct: 85 PHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNDQGEIVKGVCSNFLCDLKPGADVKIT 144
Query: 252 AWFQKGSLPRPPPSVPLILIGPGTGCAPFRG-----FVEERAIQSSSGPAAPIIFFFGCR 306
K L P+ +I++ GTG APFR F+EE SG A F G
Sbjct: 145 GPVGKEMLMPKDPNATVIMLATGTGIAPFRSFLWKMFLEEHEDYKFSGLA---WLFLGVP 201
Query: 307 NEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAF--SRKQP----QKVYVQHKMLEQSQRI 360
D LY+E E F + F SR+Q +K+Y+Q +M E + +
Sbjct: 202 TSDSLLYKEELEK-------MKEMAPDNFRLDFAVSREQTNAAGEKMYIQTRMAEYREEL 254
Query: 361 WNLLLSKASIYVAGSATK-MPSDVWSTFEEIVSKEGEASRDSAANWL---KALQRAGRYH 416
W LL K + YV K M + + +K+G +W+ K L++ +++
Sbjct: 255 WE-LLKKDNTYVYMCGLKGMEKGIDDIMLNLAAKDG-------IDWMQYKKQLKKGEQWN 306
Query: 417 VEAW 420
VE +
Sbjct: 307 VEVY 310
>pdb|3LVB|A Chain A, Crystal Structure Of The Ferredoxin:nadp+ Reductase From
Maize Root At 1.7 Angstroms - Test Set Withheld
Length = 311
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 85/197 (43%), Gaps = 17/197 (8%)
Query: 231 RTGLCSVWLAGLDPQQGIYIPAWFQK-GSLPRPPPSVPLILIGPGTGCAPFRGFVEERAI 289
+ G+CS +L P I + K LP P+ I+I GTG APFRG++ +
Sbjct: 125 KNGVCSNFLCNSKPGDKIQLTGPSGKIMLLPEEDPNATHIMIATGTGVAPFRGYLRRMFM 184
Query: 290 QSSSGP--AAPIIFFFGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQPQ-- 345
+ F G N D LY E + S+ + + A SR+Q
Sbjct: 185 EDVPNYRFGGLAWLFLGVANSDSLLYDEEFTSY-----LKQYPDNFRYDKALSREQKNRS 239
Query: 346 --KVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAA 403
K+YVQ K+ E S I+ LL A IY G MP + T +++ + GE S
Sbjct: 240 GGKMYVQDKIEEYSDEIFKLLDGGAHIYFCGLKGMMPG-IQDTLKKVAERRGE----SWD 294
Query: 404 NWLKALQRAGRYHVEAW 420
L L++ ++HVE +
Sbjct: 295 QKLAQLKKNKQWHVEVY 311
>pdb|1JB9|A Chain A, Crystal Structure Of The Ferredoxin:nadp+ Reductase From
Maize Root At 1.7 Angstroms
Length = 316
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 85/197 (43%), Gaps = 17/197 (8%)
Query: 231 RTGLCSVWLAGLDPQQGIYIPAWFQKGSL-PRPPPSVPLILIGPGTGCAPFRGFVEERAI 289
+ G+CS +L P I + K L P P+ I+I GTG APFRG++ +
Sbjct: 130 KNGVCSNFLCNSKPGDKIQLTGPSGKIMLLPEEDPNATHIMIATGTGVAPFRGYLRRMFM 189
Query: 290 QSSSGP--AAPIIFFFGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQPQ-- 345
+ F G N D LY E + S+ + + A SR+Q
Sbjct: 190 EDVPNYRFGGLAWLFLGVANSDSLLYDEEFTSY-----LKQYPDNFRYDKALSREQKNRS 244
Query: 346 --KVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAA 403
K+YVQ K+ E S I+ LL A IY G MP + T +++ + GE S
Sbjct: 245 GGKMYVQDKIEEYSDEIFKLLDGGAHIYFCGLKGMMPG-IQDTLKKVAERRGE----SWD 299
Query: 404 NWLKALQRAGRYHVEAW 420
L L++ ++HVE +
Sbjct: 300 QKLAQLKKNKQWHVEVY 316
>pdb|3LO8|A Chain A, Crystal Structure Of The Oxidized Form Of Ferredoxin:nadp+
Reductase From Maize Root At 1.05 Angstroms
Length = 311
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 84/195 (43%), Gaps = 17/195 (8%)
Query: 231 RTGLCSVWLAGLDPQQGIYIPAWFQKGSL-PRPPPSVPLILIGPGTGCAPFRGFVEERAI 289
+ G+CS +L P I + K L P P+ I+I GTG APFRG++ +
Sbjct: 125 KNGVCSNFLCNSKPGDKIQLTGPSGKIMLLPEEDPNATHIMIATGTGVAPFRGYLRRMFM 184
Query: 290 QSSSGP--AAPIIFFFGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQPQ-- 345
+ F G N D LY E + S+ + + A SR+Q
Sbjct: 185 EDVPNYRFGGLAWLFLGVANSDSLLYDEEFTSY-----LKQYPDNFRYDKALSREQKNRS 239
Query: 346 --KVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAA 403
K+YVQ K+ E S I+ LL A IY G MP + T +++ + GE S
Sbjct: 240 GGKMYVQDKIEEYSDEIFKLLDGGAHIYFCGLKGMMPG-IQDTLKKVAERRGE----SWD 294
Query: 404 NWLKALQRAGRYHVE 418
L L++ ++HVE
Sbjct: 295 QKLAQLKKNKQWHVE 309
>pdb|1GAQ|A Chain A, Crystal Structure Of The Complex Between Ferredoxin And
Ferredoxin-Nadp+ Reductase
pdb|1GAQ|C Chain C, Crystal Structure Of The Complex Between Ferredoxin And
Ferredoxin-Nadp+ Reductase
pdb|1GAW|A Chain A, Crystal Structure Analysis Of The Ferredoxin-Nadp+
Reductase From Maize Leaf
pdb|1GAW|B Chain B, Crystal Structure Analysis Of The Ferredoxin-Nadp+
Reductase From Maize Leaf
Length = 314
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 105/255 (41%), Gaps = 30/255 (11%)
Query: 181 SVQMPIDWLVQLVPPLKTRAFSISSSPLAH---PNQVHLTVSVVSWTTPYKRKRTGLCSV 237
S+ + D + + P K R +SI+SS + V L V + +T G+CS
Sbjct: 75 SIGVIADGVDKNGKPHKVRLYSIASSAIGDFGDSKTVSLCVKRLIYTNDAGEIVKGVCSN 134
Query: 238 WLAGLDPQQGIYIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAA 297
+L L P + I K L P+ +I++ GTG APFR F+ + +
Sbjct: 135 FLCDLQPGDNVQITGPVGKEMLMPKDPNATIIMLATGTGIAPFRSFLWKMFFEKHDDYKF 194
Query: 298 PII--FFFGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYV--AFSRKQP----QKVYV 349
+ F G LY+E + G E F V A SR+Q +++Y+
Sbjct: 195 NGLGWLFLGVPTSSSLLYKEEF-------GKMKERAPENFRVDYAVSREQTNAAGERMYI 247
Query: 350 QHKMLEQSQRIWNLLLSKASIYVAGSATK-MPSDVWSTFEEIVSKEGEASRDSAANWL-- 406
Q +M E + +W LL K + YV K M + + K+G +W
Sbjct: 248 QTRMAEYKEELWE-LLKKDNTYVYMCGLKGMEKGIDDIMVSLAEKDG-------IDWFDY 299
Query: 407 -KALQRAGRYHVEAW 420
K L+R +++VE +
Sbjct: 300 KKQLKRGDQWNVEVY 314
>pdb|1SM4|A Chain A, Crystal Structure Analysis Of The Ferredoxin-Nadp+
Reductase From Paprika
pdb|1SM4|B Chain B, Crystal Structure Analysis Of The Ferredoxin-Nadp+
Reductase From Paprika
Length = 296
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 100/238 (42%), Gaps = 24/238 (10%)
Query: 195 PLKTRAFSISSSPLAH---PNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIP 251
P K R +SI+SS L V L V + +T + G+CS +L L P + I
Sbjct: 71 PHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNDKGEEVKGVCSNFLCDLKPGADVKIT 130
Query: 252 AWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFV-----EERAIQSSSGPAAPIIFFFGCR 306
K L P+ +I++G GTG APFR F+ E+ +G A F G
Sbjct: 131 GPVGKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHDDYKFNGLA---WLFLGVP 187
Query: 307 NEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQP----QKVYVQHKMLEQSQRIWN 362
LY+E + + A SR+Q +K+Y+Q +M + ++ +W
Sbjct: 188 TSSSLLYKEEFEKMKE-----KAPENFRLDFAVSREQTNEKGEKMYIQTRMAQYAEELWT 242
Query: 363 LLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYHVEAW 420
LL + M + + +KEG A++ K L++A +++VE +
Sbjct: 243 LLKKDNTFVYMCGLKGMEQGIDDIMSSLAAKEGI----DWADYKKQLKKAEQWNVEVY 296
>pdb|1W35|A Chain A, Ferredoxin-Nadp+ Reductase (Mutation: Y 303 W)
pdb|1W87|A Chain A, Ferredoxin-Nadp Reductase (Mutation: Y 303 W) Complexed
With Nadp By Cocrystallization
pdb|1W87|B Chain B, Ferredoxin-Nadp Reductase (Mutation: Y 303 W) Complexed
With Nadp By Cocrystallization
Length = 304
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 107/244 (43%), Gaps = 31/244 (12%)
Query: 195 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 248
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 74 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 131
Query: 249 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 302
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 132 KITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 190
Query: 303 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 357
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 191 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 245
Query: 358 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 416
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 246 DQLWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 300
Query: 417 VEAW 420
VE W
Sbjct: 301 VETW 304
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 17 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 66
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 16 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 65
>pdb|1QH0|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Leu 76 Mutated By
Asp And Leu 78 Mutated By Asp
Length = 295
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 107/244 (43%), Gaps = 31/244 (12%)
Query: 195 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 248
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 65 PEKDRDYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 122
Query: 249 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 302
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 123 KITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 181
Query: 303 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 357
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 182 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 236
Query: 358 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 416
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 237 DQLWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 291
Query: 417 VEAW 420
VE +
Sbjct: 292 VETY 295
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 17 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 66
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 7 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 56
>pdb|1H85|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Val 136 Replaced By
Leu (V136l)
Length = 295
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 107/244 (43%), Gaps = 31/244 (12%)
Query: 195 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 248
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 65 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 122
Query: 249 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 302
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 123 KITGPLGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 181
Query: 303 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 357
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 182 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 236
Query: 358 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 416
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 237 DQLWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 291
Query: 417 VEAW 420
VE +
Sbjct: 292 VETY 295
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 17 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 66
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 7 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 56
>pdb|1QGA|A Chain A, Pea Fnr Y308w Mutant In Complex With Nadp+
pdb|1QGA|B Chain B, Pea Fnr Y308w Mutant In Complex With Nadp+
Length = 308
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 99/241 (41%), Gaps = 30/241 (12%)
Query: 195 PLKTRAFSISSSPLAH---PNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIP 251
P K R +SI+SS + V L V + +T G+CS +L L P + I
Sbjct: 83 PHKLRLYSIASSAIGDFGDSKTVSLCVKRLVYTNDAGEVVKGVCSNFLCDLKPGSEVKIT 142
Query: 252 AWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFV-----EERAIQSSSGPAAPIIFFFGCR 306
K L P+ +I++G GTG APFR F+ E+ +G A F G
Sbjct: 143 GPVGKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHEDYQFNGLAW---LFLGVP 199
Query: 307 NEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ----PQKVYVQHKMLEQSQRIWN 362
LY+E + + A SR+Q +K+Y+Q +M + ++ +W
Sbjct: 200 TSSSLLYKEEFEKMKE-----KAPENFRLDFAVSREQVNDKGEKMYIQTRMAQYAEELWE 254
Query: 363 LLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWL---KALQRAGRYHVEA 419
LL + M + + +K+G +W+ + L++A +++VE
Sbjct: 255 LLKKDNTFVYMCGLKGMEKGIDDIMVSLAAKDG-------IDWIEYKRTLKKAEQWNVEV 307
Query: 420 W 420
W
Sbjct: 308 W 308
>pdb|1GR1|A Chain A, Structure Of Ferredoxin-Nadp+ Reductase With Glu 139
Replaced By Lys (E139k)
Length = 303
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 107/244 (43%), Gaps = 31/244 (12%)
Query: 195 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 248
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 73 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 130
Query: 249 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 302
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 131 KITGPVGKKMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 189
Query: 303 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 357
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 190 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 244
Query: 358 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 416
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 245 DQLWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 299
Query: 417 VEAW 420
VE +
Sbjct: 300 VETY 303
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 17 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 66
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 15 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 64
>pdb|1QUE|A Chain A, X-Ray Structure Of The Ferredoxin:nadp+ Reductase From The
Cyanobacterium Anabaena Pcc 7119 At 1.8 Angstroms
Length = 303
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 107/244 (43%), Gaps = 31/244 (12%)
Query: 195 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 248
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 73 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 130
Query: 249 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 302
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 131 KITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 189
Query: 303 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 357
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 190 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 244
Query: 358 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 416
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 245 DQLWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 299
Query: 417 VEAW 420
VE +
Sbjct: 300 VETY 303
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 17 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 66
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 15 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 64
>pdb|1QUF|A Chain A, X-Ray Structure Of A Complex Nadp+-Ferredoxin:nadp+
Reductase From The Cyanobacterium Anabaena Pcc 7119 At
2.25 Angstroms
Length = 304
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 107/244 (43%), Gaps = 31/244 (12%)
Query: 195 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 248
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 74 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 131
Query: 249 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 302
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 132 KITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 190
Query: 303 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 357
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 191 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 245
Query: 358 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 416
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 246 DQLWQLIKNEKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 300
Query: 417 VEAW 420
VE +
Sbjct: 301 VETY 304
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 17 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 66
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 16 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 65
>pdb|1GO2|A Chain A, Structure Of Ferredoxin-nadp+ Reductase With Lys 72
Replaced By Glu (k72e)
Length = 304
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 107/244 (43%), Gaps = 31/244 (12%)
Query: 195 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 248
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 74 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 131
Query: 249 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 302
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 132 KITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 190
Query: 303 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 357
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 191 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 245
Query: 358 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 416
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 246 DQLWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 300
Query: 417 VEAW 420
VE +
Sbjct: 301 VETY 304
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 17 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 66
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 16 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 65
>pdb|1QGZ|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Leu 78 Replaced By
Asp (L78d)
Length = 295
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 107/244 (43%), Gaps = 31/244 (12%)
Query: 195 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 248
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 65 PEKLRDYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 122
Query: 249 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 302
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 123 KITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 181
Query: 303 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 357
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 182 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 236
Query: 358 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 416
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 237 DQLWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 291
Query: 417 VEAW 420
VE +
Sbjct: 292 VETY 295
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 17 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 66
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 7 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 56
>pdb|1GJR|A Chain A, Ferredoxin-Nadp+ Reductase Complexed With Nadp+ By
Cocrystallization
Length = 304
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 107/244 (43%), Gaps = 31/244 (12%)
Query: 195 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 248
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 74 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 131
Query: 249 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 302
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 132 KITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 190
Query: 303 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 357
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 191 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 245
Query: 358 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 416
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 246 DQLWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 300
Query: 417 VEAW 420
VE +
Sbjct: 301 VETY 304
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 17 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 66
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 16 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 65
>pdb|1BJK|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Arg 264 Replaced By
Glu (r264e)
Length = 295
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 107/244 (43%), Gaps = 31/244 (12%)
Query: 195 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 248
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 65 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 122
Query: 249 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 302
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 123 KITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 181
Query: 303 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 357
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 182 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 236
Query: 358 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 416
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 237 DQLWQLIKNQKTHTYICG-LEGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 291
Query: 417 VEAW 420
VE +
Sbjct: 292 VETY 295
Score = 33.1 bits (74), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 17 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 66
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 7 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 56
>pdb|1OGJ|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Leu 263 Replaced By
Pro (L263p)
Length = 303
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 107/244 (43%), Gaps = 31/244 (12%)
Query: 195 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 248
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 73 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 130
Query: 249 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 302
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 131 KITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 189
Query: 303 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 357
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 190 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 244
Query: 358 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 416
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 245 DQLWQLIKNQKTHTYICGPRG-MEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 299
Query: 417 VEAW 420
VE +
Sbjct: 300 VETY 303
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 17 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 66
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 15 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 64
>pdb|1EWY|A Chain A, Anabaena Pcc7119 Ferredoxin:ferredoxin-Nadp+-Reductase
Complex
pdb|1EWY|B Chain B, Anabaena Pcc7119 Ferredoxin:ferredoxin-Nadp+-Reductase
Complex
Length = 303
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 106/244 (43%), Gaps = 31/244 (12%)
Query: 195 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 248
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 73 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 130
Query: 249 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 302
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 131 KITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 189
Query: 303 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 357
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 190 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 244
Query: 358 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 416
+W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 245 DELWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 299
Query: 417 VEAW 420
VE +
Sbjct: 300 VETY 303
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 17 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 66
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 15 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 64
>pdb|1BQE|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Thr 155 Replaced By
Gly (T155g)
Length = 295
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 107/244 (43%), Gaps = 31/244 (12%)
Query: 195 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 248
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 65 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 122
Query: 249 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 302
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 123 KITGPVGKEMLLPDDPEANVIMLAGGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 181
Query: 303 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 357
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 182 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 236
Query: 358 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 416
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 237 DQLWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 291
Query: 417 VEAW 420
VE +
Sbjct: 292 VETY 295
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 17 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 66
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 7 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 56
>pdb|1W34|A Chain A, Ferredoxin-Nadp Reductase (Mutation: Y 303 S)
Length = 304
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 106/243 (43%), Gaps = 31/243 (12%)
Query: 195 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 248
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 74 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 131
Query: 249 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 302
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 132 KITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 190
Query: 303 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 357
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 191 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 245
Query: 358 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 416
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 246 DQLWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 300
Query: 417 VEA 419
VE
Sbjct: 301 VET 303
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 17 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 66
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 16 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 65
>pdb|1E62|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Lys 75 Replaced By
Arg (K75r)
Length = 304
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 107/244 (43%), Gaps = 31/244 (12%)
Query: 195 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 248
P + R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 74 PERLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 131
Query: 249 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 302
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 132 KITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 190
Query: 303 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 357
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 191 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 245
Query: 358 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 416
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 246 DQLWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 300
Query: 417 VEAW 420
VE +
Sbjct: 301 VETY 304
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 17 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 66
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 16 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 65
>pdb|2X3U|A Chain A, Ferredoxin-Nadp Reductase Mutant With Tyr 303 Replaced By
Phe (Y303f)
Length = 303
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 106/244 (43%), Gaps = 31/244 (12%)
Query: 195 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 248
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 73 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 130
Query: 249 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 302
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 131 KITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 189
Query: 303 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 357
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 190 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 244
Query: 358 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 416
+W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 245 DELWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 299
Query: 417 VEAW 420
VE +
Sbjct: 300 VETF 303
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 17 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 66
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 15 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 64
>pdb|2BSA|A Chain A, Ferredoxin-Nadp Reductase (Mutation: Y 303 S) Complexed
With Nadp
Length = 303
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 106/243 (43%), Gaps = 31/243 (12%)
Query: 195 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 248
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 73 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGATVYGVCSTYLTHIEPGSEV 130
Query: 249 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 302
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 131 KITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 189
Query: 303 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 357
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 190 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 244
Query: 358 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 416
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 245 DQLWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 299
Query: 417 VEA 419
VE
Sbjct: 300 VET 302
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 17 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 66
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 15 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 64
>pdb|1E64|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Lys 75 Replaced By
Gln (K75q)
Length = 304
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 107/244 (43%), Gaps = 31/244 (12%)
Query: 195 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 248
P + R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 74 PEQLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 131
Query: 249 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 302
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 132 KITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 190
Query: 303 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 357
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 191 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 245
Query: 358 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 416
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 246 DQLWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 300
Query: 417 VEAW 420
VE +
Sbjct: 301 VETY 304
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 17 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 66
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 16 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 65
>pdb|1QGY|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Lys 75 Replaced By
Glu (K75e)
Length = 295
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 107/244 (43%), Gaps = 31/244 (12%)
Query: 195 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 248
P + R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 65 PEELRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 122
Query: 249 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 302
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 123 KITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 181
Query: 303 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 357
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 182 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 236
Query: 358 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 416
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 237 DQLWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 291
Query: 417 VEAW 420
VE +
Sbjct: 292 VETY 295
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 17 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 66
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 7 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 56
>pdb|1OGI|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Thr 155 Replaced By
Gly And Ala 160 Replaced By Thr (T155g-A160t)
Length = 303
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 106/244 (43%), Gaps = 31/244 (12%)
Query: 195 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 248
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 73 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 130
Query: 249 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 302
I K L P +I++ GTG P R ++ R + + A P F
Sbjct: 131 KITGPVGKEMLLPDDPEANVIMLAGGTGITPMRTYL-WRMFKDAERAANPEYQFKGFSWL 189
Query: 303 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 357
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 190 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 244
Query: 358 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 416
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 245 DQLWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 299
Query: 417 VEAW 420
VE +
Sbjct: 300 VETY 303
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 17 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 66
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 15 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 64
>pdb|4AF6|A Chain A, Pea Fnr L268v Mutant
pdb|4AF6|B Chain B, Pea Fnr L268v Mutant
Length = 308
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 99/241 (41%), Gaps = 30/241 (12%)
Query: 195 PLKTRAFSISSSPLAH---PNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIP 251
P K R +SI+SS + V L V + +T G+CS +L L P + I
Sbjct: 83 PHKLRLYSIASSAIGDFGDSKTVSLCVKRLVYTNDAGEVVKGVCSNFLCDLKPGSEVKIT 142
Query: 252 AWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFV-----EERAIQSSSGPAAPIIFFFGCR 306
K L P+ +I++G GTG APFR F+ E+ +G A F G
Sbjct: 143 GPVGKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHEDYQFNGLAW---LFLGVP 199
Query: 307 NEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ----PQKVYVQHKMLEQSQRIWN 362
LY+E + + A SR+Q +K+Y+Q +M + ++ +W
Sbjct: 200 TSSSLLYKEEFEKMKE-----KAPENFRLDFAVSREQVNDKGEKMYIQTRMAQYAEELWE 254
Query: 363 LLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWL---KALQRAGRYHVEA 419
LL + M + + +K+G +W+ + L++A +++VE
Sbjct: 255 LLKKDNTFVYMCGVKGMEKGIDDIMVSLAAKDG-------IDWIEYKRTLKKAEQWNVEV 307
Query: 420 W 420
+
Sbjct: 308 Y 308
>pdb|1H42|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Thr 155 Replaced By
Gly, Ala 160 Replaced By Thr And Leu 263 Replaced By Pro
(T155g-A160t-L263p)
Length = 304
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 106/244 (43%), Gaps = 31/244 (12%)
Query: 195 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 248
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 74 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 131
Query: 249 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 302
I K L P +I++ GTG P R ++ R + + A P F
Sbjct: 132 KITGPVGKEMLLPDDPEANVIMLAGGTGITPMRTYL-WRMFKDAERAANPEYQFKGFSWL 190
Query: 303 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 357
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 191 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 245
Query: 358 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 416
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 246 DQLWQLIKNQKTHTYICGPRG-MEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 300
Query: 417 VEAW 420
VE +
Sbjct: 301 VETY 304
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 17 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 66
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 16 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 65
>pdb|1E63|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Lys 75 Replaced By
Ser (K75s)
Length = 304
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 106/244 (43%), Gaps = 31/244 (12%)
Query: 195 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 248
P R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 74 PESLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 131
Query: 249 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 302
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 132 KITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 190
Query: 303 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 357
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 191 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 245
Query: 358 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 416
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 246 DQLWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 300
Query: 417 VEAW 420
VE +
Sbjct: 301 VETY 304
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 17 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 66
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 16 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 65
>pdb|2BMW|A Chain A, Ferredoxin: Nadp+reductase Mutant With Thr 155 Replaced By
Gly, Ala 160 Replaced By Thr, Leu 263 Replaced By Pro,
Arg 264 Replaced By Pro And Gly 265 Replaced By Pro
(T155g- A160t-L263p-R264p-G265p)
Length = 304
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 106/244 (43%), Gaps = 31/244 (12%)
Query: 195 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 248
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 74 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 131
Query: 249 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 302
I K L P +I++ GTG P R ++ R + + A P F
Sbjct: 132 KITGPVGKEMLLPDDPEANVIMLAGGTGITPMRTYL-WRMFKDAERAANPEYQFKGFSWL 190
Query: 303 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 357
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 191 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 245
Query: 358 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 416
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 246 DQLWQLIKNQKTHTYICGPPP-MEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 300
Query: 417 VEAW 420
VE +
Sbjct: 301 VETY 304
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 17 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 66
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 16 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 65
>pdb|1QG0|A Chain A, Wild-type Pea Fnr
pdb|1QG0|B Chain B, Wild-type Pea Fnr
Length = 308
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 99/241 (41%), Gaps = 30/241 (12%)
Query: 195 PLKTRAFSISSSPLAH---PNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIP 251
P K R +SI+SS + V L V + +T G+CS +L L P + I
Sbjct: 83 PHKLRLYSIASSAIGDFGDSKTVSLCVKRLVYTNDAGEVVKGVCSNFLCDLKPGSEVKIT 142
Query: 252 AWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFV-----EERAIQSSSGPAAPIIFFFGCR 306
K L P+ +I++G GTG APFR F+ E+ +G A F G
Sbjct: 143 GPVGKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHEDYQFNGLAW---LFLGVP 199
Query: 307 NEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ----PQKVYVQHKMLEQSQRIWN 362
LY+E + + A SR+Q +K+Y+Q +M + ++ +W
Sbjct: 200 TSSSLLYKEEFEKMKE-----KAPENFRLDFAVSREQVNDKGEKMYIQTRMAQYAEELWE 254
Query: 363 LLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWL---KALQRAGRYHVEA 419
LL + M + + +K+G +W+ + L++A +++VE
Sbjct: 255 LLKKDNTFVYMCGLKGMEKGIDDIMVSLAAKDG-------IDWIEYKRTLKKAEQWNVEV 307
Query: 420 W 420
+
Sbjct: 308 Y 308
>pdb|1B2R|A Chain A, Ferredoxin-Nadp+ Reductase (Mutation: E 301 A)
Length = 304
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 106/244 (43%), Gaps = 31/244 (12%)
Query: 195 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 248
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 74 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 131
Query: 249 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 302
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 132 KITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 190
Query: 303 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 357
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 191 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 245
Query: 358 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 416
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 246 DQLWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 300
Query: 417 VEAW 420
V +
Sbjct: 301 VATY 304
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 17 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 66
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 16 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 65
>pdb|3MHP|A Chain A, Fnr-Recruitment To The Thylakoid
pdb|3MHP|B Chain B, Fnr-Recruitment To The Thylakoid
Length = 296
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 99/241 (41%), Gaps = 30/241 (12%)
Query: 195 PLKTRAFSISSSPLAH---PNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIP 251
P K R +SI+SS + V L V + +T G+CS +L L P + I
Sbjct: 70 PHKLRLYSIASSAIGDFGDSKTVSLCVKRLVYTNDAGEVVKGVCSNFLCDLKPGSEVKIT 129
Query: 252 AWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFV-----EERAIQSSSGPAAPIIFFFGCR 306
K L P+ +I++G GTG APFR F+ E+ +G A F G
Sbjct: 130 GPVGKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHEDYQFNGLAW---LFLGVP 186
Query: 307 NEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ----PQKVYVQHKMLEQSQRIWN 362
LY+E + + A SR+Q +K+Y+Q +M + ++ +W
Sbjct: 187 TSSSLLYKEEFEKMKE-----KAPENFRLDFAVSREQVNDKGEKMYIQTRMAQYAEELWE 241
Query: 363 LLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWL---KALQRAGRYHVEA 419
LL + M + + +K+G +W+ + L++A +++VE
Sbjct: 242 LLKKDNTFVYMCGLKGMEKGIDDIMVSLAAKDG-------IDWIEYKRTLKKAEQWNVEV 294
Query: 420 W 420
+
Sbjct: 295 Y 295
>pdb|4AF7|A Chain A, Pea Fnr C266m Mutant
pdb|4AF7|B Chain B, Pea Fnr C266m Mutant
Length = 308
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 99/241 (41%), Gaps = 30/241 (12%)
Query: 195 PLKTRAFSISSSPLAH---PNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIP 251
P K R +SI+SS + V L V + +T G+CS +L L P + I
Sbjct: 83 PHKLRLYSIASSAIGDFGDSKTVSLCVKRLVYTNDAGEVVKGVCSNFLCDLKPGSEVKIT 142
Query: 252 AWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFV-----EERAIQSSSGPAAPIIFFFGCR 306
K L P+ +I++G GTG APFR F+ E+ +G A F G
Sbjct: 143 GPVGKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHEDYQFNGLAW---LFLGVP 199
Query: 307 NEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ----PQKVYVQHKMLEQSQRIWN 362
LY+E + + A SR+Q +K+Y+Q +M + ++ +W
Sbjct: 200 TSSSLLYKEEFEKMKE-----KAPENFRLDFAVSREQVNDKGEKMYIQTRMAQYAEELWE 254
Query: 363 LLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWL---KALQRAGRYHVEA 419
LL + M + + +K+G +W+ + L++A +++VE
Sbjct: 255 LLKKDNTFVYMMGLKGMEKGIDDIMVSLAAKDG-------IDWIEYKRTLKKAEQWNVEV 307
Query: 420 W 420
+
Sbjct: 308 Y 308
>pdb|2VYQ|A Chain A, Ferredoxin:nadp Reductase Mutant With Thr 155 Replaced By
Gly, Ala 160 Replaced By Thr, Leu 263 Replaced By Pro
And Tyr 303 Replaced By Ser (T155g-A160t-L263p-Y303s)
pdb|2VZL|A Chain A, Ferredoxin-Nadp Reductase (Mutations: T155g, A160t, L263p
And Y303s) Complexed With Nad By Cocrystallization
Length = 304
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 104/243 (42%), Gaps = 31/243 (12%)
Query: 195 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 248
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 74 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 131
Query: 249 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 302
I K L P +I++ GTG P R ++ R + + A P F
Sbjct: 132 KITGPVGKEMLLPDDPEANVIMLAGGTGITPMRTYL-WRMFKDAERAANPEYQFKGFSWL 190
Query: 303 -FGCRNEDDFLYRELW--LSHSLNDGVFSEAKGGGFYVAFSRKQPQ--KVYVQHKMLEQS 357
FG + LY+E + D + ++ +K PQ ++Y+Q ++ E +
Sbjct: 191 VFGVPTTPNILYKEELEEIQQKYPDNFRLT-----YAISREQKNPQGGRMYIQDRVAEHA 245
Query: 358 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 416
+W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 246 DELWQLIKNQKTHTYICGPRG-MEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 300
Query: 417 VEA 419
VE
Sbjct: 301 VET 303
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 17 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 66
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 16 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 65
>pdb|1QFY|A Chain A, Pea Fnr Y308s Mutant In Complex With Nadp+
pdb|1QFY|B Chain B, Pea Fnr Y308s Mutant In Complex With Nadp+
pdb|1QFZ|A Chain A, Pea Fnr Y308s Mutant In Complex With Nadph
pdb|1QFZ|B Chain B, Pea Fnr Y308s Mutant In Complex With Nadph
Length = 308
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 98/240 (40%), Gaps = 30/240 (12%)
Query: 195 PLKTRAFSISSSPLAH---PNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIP 251
P K R +SI+SS + V L V + +T G+CS +L L P + I
Sbjct: 83 PHKLRLYSIASSAIGDFGDSKTVSLCVKRLVYTNDAGEVVKGVCSNFLCDLKPGSEVKIT 142
Query: 252 AWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFV-----EERAIQSSSGPAAPIIFFFGCR 306
K L P+ +I++G GTG APFR F+ E+ +G A F G
Sbjct: 143 GPVGKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHEDYQFNGLAW---LFLGVP 199
Query: 307 NEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ----PQKVYVQHKMLEQSQRIWN 362
LY+E + + A SR+Q +K+Y+Q +M + ++ +W
Sbjct: 200 TSSSLLYKEEFEKMKE-----KAPENFRLDFAVSREQVNDKGEKMYIQTRMAQYAEELWE 254
Query: 363 LLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWL---KALQRAGRYHVEA 419
LL + M + + +K+G +W+ + L++A +++VE
Sbjct: 255 LLKKDNTFVYMCGLKGMEKGIDDIMVSLAAKDG-------IDWIEYKRTLKKAEQWNVEV 307
>pdb|2XNC|A Chain A, Crystal Structure Of An Engineered Ferredoxin Nadp
Reductase (Fnr) From Pisum Sativum
pdb|2XNC|B Chain B, Crystal Structure Of An Engineered Ferredoxin Nadp
Reductase (Fnr) From Pisum Sativum
Length = 315
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 99/238 (41%), Gaps = 33/238 (13%)
Query: 195 PLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIPAWF 254
P K R +SI+SS + TVS+ KR G+CS +L L P + I
Sbjct: 98 PHKLRLYSIASSAIGDFGDSK-TVSLC-----VKRVPDGVCSNFLCDLKPGSEVKITGPV 151
Query: 255 QKGSLPRPPPSVPLILIGPGTGCAPFRGFV-----EERAIQSSSGPAAPIIFFFGCRNED 309
K L P+ +I++G GTG APFR F+ E+ +G A F G
Sbjct: 152 GKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHEDYQFNGLA---WLFLGVPTSS 208
Query: 310 DFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ----PQKVYVQHKMLEQSQRIWNLLL 365
LY+E + + A SR+Q +K+Y+Q +M + ++ +W LL
Sbjct: 209 SLLYKEEFEKMKE-----KAPENFRLDFAVSREQVNDKGEKMYIQTRMAQYAEELWELLK 263
Query: 366 SKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWL---KALQRAGRYHVEAW 420
+ M + + +K+G +W+ + L++A +++VE +
Sbjct: 264 KDNTFVYMCGLKGMEKGIDDIMVSLAAKDG-------IDWIEYKRTLKKAEQWNVEVY 314
>pdb|1FNB|A Chain A, Refined Crystal Structure Of Spinach Ferredoxin Reductase
At 1.7 Angstroms Resolution: Oxidized, Reduced, And 2'-
Phospho-5'-Amp Bound States
pdb|1FNC|A Chain A, Refined Crystal Structure Of Spinach Ferredoxin Reductase
At 1.7 Angstroms Resolution: Oxidized, Reduced, And 2'-
Phospho-5'-Amp Bound States
pdb|1FND|A Chain A, Refined Crystal Structure Of Spinach Ferredoxin Reductase
At 1.7 Angstroms Resolution: Oxidized, Reduced, And 2'-
Phospho-5'-Amp Bound States
Length = 314
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 100/242 (41%), Gaps = 32/242 (13%)
Query: 195 PLKTRAFSISSSPLAH---PNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIP 251
P K R +SI+SS L V L V + +T G+CS +L L P + +
Sbjct: 89 PHKLRLYSIASSALGDFGDAKSVSLCVKRLIYTNDAGETIKGVCSNFLCDLKPGAEVKLT 148
Query: 252 AWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFV-----EERAIQSSSGPAAPIIFFFGCR 306
K L P+ +I++G GTG APFR F+ E+ +G A F G
Sbjct: 149 GPVGKEMLMPKDPNATIIMLGTGTGIAPFRSFLWKMFFEKHDDYKFNGLA---WLFLGVP 205
Query: 307 NEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQP----QKVYVQHKMLEQSQRIWN 362
LY+E + A SR+Q +K+Y+Q +M + + +W
Sbjct: 206 TSSSLLYKEEFEKMKE-----KAPDNFRLDFAVSREQTNEKGEKMYIQTRMAQYAVELWE 260
Query: 363 LLLSKASIYVAGSATK-MPSDVWSTFEEIVSKEGEASRDSAANWL---KALQRAGRYHVE 418
+L K + YV K M + + + EG +W+ + L++A +++VE
Sbjct: 261 -MLKKDNTYVYMCGLKGMEKGIDDIMVSLAAAEG-------IDWIEYKRQLKKAEQWNVE 312
Query: 419 AW 420
+
Sbjct: 313 VY 314
>pdb|1BX1|A Chain A, Ferredoxin:nadp+ Oxidoreductase (Ferredoxin Reductase)
Mutant E312q
Length = 314
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 97/241 (40%), Gaps = 30/241 (12%)
Query: 195 PLKTRAFSISSSPLAH---PNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIP 251
P K R +SI+SS L V L V + +T G+CS +L L P + +
Sbjct: 89 PHKLRLYSIASSALGDFGDAKSVSLCVKRLIYTNDAGETIKGVCSNFLCDLKPGAEVKLT 148
Query: 252 AWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFV-----EERAIQSSSGPAAPIIFFFGCR 306
K L P+ +I++G GTG APFR F+ E+ +G A F G
Sbjct: 149 GPVGKEMLMPKDPNATIIMLGTGTGIAPFRSFLWKMFFEKHDDYKFNGLA---WLFLGVP 205
Query: 307 NEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQP----QKVYVQHKMLEQSQRIWN 362
LY+E + A SR+Q +K+Y+Q +M + + +W
Sbjct: 206 TSSSLLYKEEFEKMKE-----KAPDNFRLDFAVSREQTNEKGEKMYIQTRMAQYAVELWE 260
Query: 363 LLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWL---KALQRAGRYHVEA 419
+L + + M + + + EG +W+ + L++A +++V+
Sbjct: 261 MLKKDNTYFYMCGLKGMEKGIDDIMVSLAAAEG-------IDWIEYKRQLKKAEQWNVQV 313
Query: 420 W 420
+
Sbjct: 314 Y 314
>pdb|1FRN|A Chain A, The Involvement Of Ser96 In The Catalytic Mechanism Of
Ferredoxin-Nadp+ Reductase: Structure-Function
Relationship As Studied By Site-Directed Mutagenesis And
X- Ray Crystallography
Length = 314
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 96/241 (39%), Gaps = 30/241 (12%)
Query: 195 PLKTRAFSISSSPLAH---PNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIP 251
P K R + I+SS L V L V + +T G+CS +L L P + +
Sbjct: 89 PHKLRLYVIASSALGDFGDAKSVSLCVKRLIYTNDAGETIKGVCSNFLCDLKPGAEVKLT 148
Query: 252 AWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFV-----EERAIQSSSGPAAPIIFFFGCR 306
K L P+ +I++G GTG APFR F+ E+ +G A F G
Sbjct: 149 GPVGKEMLMPKDPNATIIMLGTGTGIAPFRSFLWKMFFEKHDDYKFNGLA---WLFLGVP 205
Query: 307 NEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQP----QKVYVQHKMLEQSQRIWN 362
LY+E + A SR+Q +K+Y+Q +M + + +W
Sbjct: 206 TSSSLLYKEEFEKMKE-----KAPDNFRLDFAVSREQTNEKGEKMYIQTRMAQYAVELWE 260
Query: 363 LLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWL---KALQRAGRYHVEA 419
+L + + M + + + EG +W+ + L++A +++VE
Sbjct: 261 MLKKDNTYFYMCGLKGMEKGIDDIMVSLAAAEG-------IDWIEYKRQLKKAEQWNVEV 313
Query: 420 W 420
+
Sbjct: 314 Y 314
>pdb|1FRQ|A Chain A, Ferredoxin:nadp+ Oxidoreductase (Ferredoxin Reductase)
Mutant E312a
Length = 314
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 96/241 (39%), Gaps = 30/241 (12%)
Query: 195 PLKTRAFSISSSPLAH---PNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIP 251
P K R +SI+SS L V L V + +T G+CS +L L P + +
Sbjct: 89 PHKLRLYSIASSALGDFGDAKSVSLCVKRLIYTNDAGETIKGVCSNFLCDLKPGAEVKLT 148
Query: 252 AWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFV-----EERAIQSSSGPAAPIIFFFGCR 306
K L P+ +I++G GTG APFR F+ E+ +G A F G
Sbjct: 149 GPVGKEMLMPKDPNATIIMLGTGTGIAPFRSFLWKMFFEKHDDYKFNGLA---WLFLGVP 205
Query: 307 NEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQP----QKVYVQHKMLEQSQRIWN 362
LY+E + A SR+Q +K+Y+Q +M + + +W
Sbjct: 206 TSSSLLYKEEFEKMKE-----KAPDNFRLDFAVSREQTNEKGEKMYIQTRMAQYAVELWE 260
Query: 363 LLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWL---KALQRAGRYHVEA 419
+L + + M + + + EG +W+ + L++A +++V
Sbjct: 261 MLKKDNTYFYMCGLKGMEKGIDDIMVSLAAAEG-------IDWIEYKRQLKKAEQWNVAV 313
Query: 420 W 420
+
Sbjct: 314 Y 314
>pdb|1BX0|A Chain A, Ferredoxin:nadp+ Oxidoreductase (Ferredoxin Reductase)
Mutant E312l
Length = 314
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 83/213 (38%), Gaps = 20/213 (9%)
Query: 195 PLKTRAFSISSSPLAH---PNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIP 251
P K R +SI+SS L V L V + +T G+CS +L L P + +
Sbjct: 89 PHKLRLYSIASSALGDFGDAKSVSLCVKRLIYTNDAGETIKGVCSNFLCDLKPGAEVKLT 148
Query: 252 AWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFV-----EERAIQSSSGPAAPIIFFFGCR 306
K L P+ +I++G GTG APFR F+ E+ +G A F G
Sbjct: 149 GPVGKEMLMPKDPNATIIMLGTGTGIAPFRSFLWKMFFEKHDDYKFNGLA---WLFLGVP 205
Query: 307 NEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQP----QKVYVQHKMLEQSQRIWN 362
LY+E + A SR+Q +K+Y+Q +M + + +W
Sbjct: 206 TSSSLLYKEEFEKMKE-----KAPDNFRLDFAVSREQTNEKGEKMYIQTRMAQYAVELWE 260
Query: 363 LLLSKASIYVAGSATKMPSDVWSTFEEIVSKEG 395
+L + + M + + + EG
Sbjct: 261 MLKKDNTYFYMCGLKGMEKGIDDIMVSLAAAEG 293
>pdb|2RC5|A Chain A, Refined Structure Of Fnr From Leptospira Interrogans
pdb|2RC5|B Chain B, Refined Structure Of Fnr From Leptospira Interrogans
pdb|2RC5|C Chain C, Refined Structure Of Fnr From Leptospira Interrogans
pdb|2RC5|D Chain D, Refined Structure Of Fnr From Leptospira Interrogans
pdb|2RC6|A Chain A, Refined Structure Of Fnr From Leptospira Interrogans Bound
To Nadp+
pdb|2RC6|B Chain B, Refined Structure Of Fnr From Leptospira Interrogans Bound
To Nadp+
pdb|2RC6|C Chain C, Refined Structure Of Fnr From Leptospira Interrogans Bound
To Nadp+
pdb|2RC6|D Chain D, Refined Structure Of Fnr From Leptospira Interrogans Bound
To Nadp+
Length = 314
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 67/169 (39%), Gaps = 12/169 (7%)
Query: 233 GLCSVWLAGLDPQQGIYIPA-WFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQS 291
G+CS ++ L P + + +K LP S ++ + GTG APF G EE
Sbjct: 132 GVCSNYMCDLKPGDEVTMTGPSGKKFLLPNTDFSGDIMFLATGTGIAPFIGMSEELLEHK 191
Query: 292 SSGPAAPIIFFFGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQPQ-----K 346
I +G D+ + + G+ S+ K A SR++ +
Sbjct: 192 LIKFTGNITLVYGAPYSDELVMMDYL------KGLESKHKNFKLITAISREEKNSFDGGR 245
Query: 347 VYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEG 395
+Y+ H++ EQ++ + +L Y+ G M V ++I G
Sbjct: 246 MYISHRVREQAEAVKKILNGGGRFYICGGPKGMEKGVIEEIQKISGNTG 294
>pdb|2B5O|A Chain A, Ferredoxin-nadp Reductase
pdb|2B5O|B Chain B, Ferredoxin-nadp Reductase
Length = 402
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 97/242 (40%), Gaps = 30/242 (12%)
Query: 195 PLKTRAFSISSS---PLAHPNQVHLTVSVVSWTTPYKRKRT-GLCSVWLAGLD-PQQGIY 249
P K R +SI+S+ + V L V + + P + G+CS +L L +
Sbjct: 175 PHKLRLYSIASTRHGDMEDNKTVSLCVRQLEYQDPESGETVYGVCSTYLCNLPVGTDDVK 234
Query: 250 IPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFV-----EERAIQSSSGPAAPIIFFFG 304
I K L ++++ GTG APFR F+ E+ G A I FG
Sbjct: 235 ITGPVGKEMLLPDDEDATVVMLATGTGIAPFRAFLWRMFKEQHEDYKFKGKAWLI---FG 291
Query: 305 CRNEDDFLYRELWLSHSL-NDGVFSEAKGGGFYVAFSRKQPQ----KVYVQHKMLEQSQR 359
+ LY++ + + N F A SR+Q KVYVQ ++ E +
Sbjct: 292 VPYTANILYKDDFEKMAAENPDNFR------LTYAISREQKTADGGKVYVQSRVSEYADE 345
Query: 360 IWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYHVE 418
++ ++ +Y+ G P +E + E E + +++++ R+HVE
Sbjct: 346 LFEMIQKPNTHVYMCGLKGMQPP-----IDETFTAEAEKRGLNWEEMRRSMKKEHRWHVE 400
Query: 419 AW 420
+
Sbjct: 401 VY 402
>pdb|1MQS|A Chain A, Crystal Structure Of Sly1p In Complex With An N-Terminal
Peptide Of Sed5p
Length = 671
Score = 32.3 bits (72), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 61/139 (43%), Gaps = 24/139 (17%)
Query: 16 NYNNKAVCFLKMIKNQP-LTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQDPAAVD 74
N NN V +++K P LT + D H F + + +E + ++D
Sbjct: 377 NSNNDTVQIQEVVKKLPELTAKKNTIDTHXNIFAALLSQLESK--------------SLD 422
Query: 75 TFIQRCNLDPDALITVQHKEMKNYLPDIHKN--TTEVPIKLRTFVELTMDVTSASPRRYF 132
TF + DP + T ++ DI K+ T + KLR+F+ L + T+ P+ +
Sbjct: 423 TFFE-VEQDPGSTKT------RSRFLDILKDGKTNNLEDKLRSFIVLYLTSTTGLPKDFV 475
Query: 133 FEVMSYFATAEHEKERLQY 151
V +YF +++ L+Y
Sbjct: 476 QNVENYFKENDYDINALKY 494
>pdb|2INY|A Chain A, Nanoporous Crystals Of Chicken Embryo Lethal Orphan (celo)
Adenovirus Major Coat Protein, Hexon
Length = 942
Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 119 LTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASPEGRDDLYKYNQKERRTVL 173
LT D+T+A+PR +F + T E+ E LQ F S G + K R+TV+
Sbjct: 4 LTPDLTTATPRLQYFHIAGP-GTREYLSEDLQQFISATGS--YFDLKNKFRQTVV 55
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.134 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,120,724
Number of Sequences: 62578
Number of extensions: 566306
Number of successful extensions: 1530
Number of sequences better than 100.0: 86
Number of HSP's better than 100.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 1278
Number of HSP's gapped (non-prelim): 116
length of query: 421
length of database: 14,973,337
effective HSP length: 101
effective length of query: 320
effective length of database: 8,652,959
effective search space: 2768946880
effective search space used: 2768946880
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)