Query 014605
Match_columns 421
No_of_seqs 232 out of 2401
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 14:34:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014605.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014605hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qfs_A CPR, P450R, NADPH--cyto 100.0 4.7E-86 1.6E-90 678.4 43.6 386 22-421 61-458 (458)
2 2qtl_A MSR;, methionine syntha 100.0 1.7E-82 5.8E-87 664.9 44.2 387 22-421 113-539 (539)
3 4dql_A Bifunctional P-450/NADP 100.0 9.6E-83 3.3E-87 644.5 39.5 377 24-421 7-392 (393)
4 3qe2_A CPR, P450R, NADPH--cyto 100.0 2.6E-82 9E-87 675.0 44.7 387 22-421 221-618 (618)
5 1f20_A Nitric-oxide synthase; 100.0 1.6E-78 5.6E-83 621.7 43.4 387 22-421 29-434 (435)
6 2bpo_A CPR, P450R, NADPH-cytoc 100.0 1.5E-78 5E-83 652.7 37.2 384 22-420 258-682 (682)
7 1ddg_A Sulfite reductase (NADP 100.0 1.5E-76 5E-81 596.1 41.2 359 23-420 11-374 (374)
8 1tll_A Nitric-oxide synthase, 100.0 2.1E-73 7.1E-78 612.8 39.7 387 22-421 250-655 (688)
9 1fnb_A Ferredoxin-NADP+ reduct 100.0 1.3E-39 4.5E-44 319.9 27.3 263 24-420 38-314 (314)
10 2bmw_A Ferredoxin--NADP reduct 100.0 1.9E-39 6.4E-44 317.2 28.1 264 24-420 22-304 (304)
11 2b5o_A FNR, ferredoxin--NADP r 100.0 5E-38 1.7E-42 318.9 25.9 264 24-420 123-402 (402)
12 3vo2_A Putative uncharacterize 100.0 1.3E-38 4.3E-43 312.5 18.4 224 184-420 67-310 (310)
13 2rc5_A Ferredoxin-NADP reducta 100.0 6.1E-37 2.1E-41 300.8 26.7 211 196-420 91-314 (314)
14 3lo8_A Ferredoxin--NADP reduct 100.0 4.7E-37 1.6E-41 301.3 18.0 225 183-420 61-311 (311)
15 3jqq_A Ferredoxin NADP reducta 100.0 1.6E-34 5.6E-39 284.2 25.7 283 22-420 14-316 (316)
16 1tvc_A Methane monooxygenase c 100.0 5.1E-28 1.7E-32 229.5 15.1 181 184-390 45-232 (250)
17 2r6h_A NADH:ubiquinone oxidore 99.9 1.2E-27 4.1E-32 231.6 11.9 181 196-390 84-277 (290)
18 1qfj_A Protein (flavin reducta 99.9 1.4E-27 4.7E-32 223.8 11.8 176 184-387 31-213 (232)
19 1fdr_A Flavodoxin reductase; f 99.9 1.4E-27 4.8E-32 225.9 9.1 184 184-390 32-229 (248)
20 1krh_A Benzoate 1,2-dioxygenas 99.9 4.5E-27 1.5E-31 232.8 12.5 178 184-390 140-323 (338)
21 2eix_A NADH-cytochrome B5 redu 99.9 1.9E-27 6.5E-32 224.4 8.7 180 184-390 43-233 (243)
22 1umk_A B5R, NADH-cytochrome B5 99.9 1.6E-27 5.4E-32 229.1 7.4 192 184-390 48-265 (275)
23 4eh1_A Flavohemoprotein; struc 99.9 5.6E-27 1.9E-31 221.0 9.9 180 184-390 35-223 (243)
24 4fk8_A Ferredoxin--NADP reduct 99.9 1.1E-27 3.9E-32 229.8 2.9 200 184-420 48-268 (271)
25 1gvh_A Flavohemoprotein; oxido 99.9 4.1E-26 1.4E-30 230.7 12.2 178 183-389 183-377 (396)
26 2bgi_A Ferredoxin-NADP(H) redu 99.9 1.3E-26 4.5E-31 222.7 7.4 183 184-389 45-247 (272)
27 4g1v_A Flavohemoglobin; three 99.9 9.9E-26 3.4E-30 228.2 13.8 181 184-390 185-378 (399)
28 2qdx_A Ferredoxin reductase; o 99.9 9.6E-27 3.3E-31 221.6 5.7 183 184-389 32-233 (257)
29 1ep3_B Dihydroorotate dehydrog 99.9 8.1E-26 2.8E-30 216.1 10.2 169 184-389 35-211 (262)
30 2cnd_A NADH-dependent nitrate 99.9 3.6E-26 1.2E-30 218.9 6.4 189 184-389 44-258 (270)
31 1cqx_A Flavohemoprotein; globi 99.9 2.1E-25 7.2E-30 226.0 11.6 181 184-389 186-383 (403)
32 2pia_A Phthalate dioxygenase r 99.9 7.8E-25 2.7E-29 215.5 8.3 172 184-389 40-214 (321)
33 2gpj_A Siderophore-interacting 99.8 3.6E-20 1.2E-24 176.1 4.4 166 183-388 39-211 (252)
34 3lrx_A Putative hydrogenase; a 99.8 7.3E-19 2.5E-23 155.4 6.7 126 242-390 1-135 (158)
35 3lyu_A Putative hydrogenase; t 99.7 1.7E-17 5.8E-22 144.0 8.1 120 250-390 3-130 (142)
36 3a1f_A Cytochrome B-245 heavy 99.7 6.4E-18 2.2E-22 151.9 3.7 133 252-391 3-170 (186)
37 3vo2_A Putative uncharacterize 84.6 1.7 5.7E-05 41.3 6.8 44 24-68 34-78 (310)
38 3lo8_A Ferredoxin--NADP reduct 70.4 9.8 0.00034 35.7 7.4 45 23-68 28-73 (311)
39 2r6h_A NADH:ubiquinone oxidore 47.9 29 0.00099 31.8 6.2 44 20-68 6-51 (290)
40 1w78_A FOLC bifunctional prote 45.1 2E+02 0.0068 27.8 12.2 108 267-389 297-416 (422)
41 3s2u_A UDP-N-acetylglucosamine 43.8 18 0.00062 34.7 4.2 27 265-291 2-30 (365)
42 3nrs_A Dihydrofolate:folylpoly 43.3 1.4E+02 0.0049 29.2 10.9 106 266-387 311-435 (437)
43 2eix_A NADH-cytochrome B5 redu 40.5 45 0.0016 29.5 6.1 44 19-67 6-53 (243)
44 2lnb_A Z-DNA-binding protein 1 36.8 68 0.0023 23.9 5.3 27 392-418 41-67 (80)
45 2pia_A Phthalate dioxygenase r 35.0 61 0.0021 30.3 6.3 38 26-68 12-51 (321)
46 1umk_A B5R, NADH-cytochrome B5 34.9 62 0.0021 29.3 6.1 37 26-67 20-58 (275)
47 1ep3_B Dihydroorotate dehydrog 34.3 43 0.0015 30.3 4.9 39 26-69 9-47 (262)
48 1tvc_A Methane monooxygenase c 33.6 38 0.0013 30.3 4.4 44 20-68 7-56 (250)
49 1qfj_A Protein (flavin reducta 32.6 59 0.002 28.5 5.5 37 26-68 6-42 (232)
50 4eh1_A Flavohemoprotein; struc 31.7 85 0.0029 27.6 6.4 38 26-68 7-46 (243)
51 1krh_A Benzoate 1,2-dioxygenas 29.7 78 0.0027 29.7 6.1 38 26-68 112-151 (338)
52 2bgi_A Ferredoxin-NADP(H) redu 26.1 80 0.0028 28.6 5.3 36 26-67 20-55 (272)
53 4fk8_A Ferredoxin--NADP reduct 25.6 72 0.0025 28.8 4.8 36 26-67 23-58 (271)
54 3h9d_A ATG8, microtubule-assoc 25.2 2.6E+02 0.009 22.3 9.4 86 247-343 29-116 (119)
55 2qdx_A Ferredoxin reductase; o 25.0 79 0.0027 28.2 4.9 37 26-68 7-43 (257)
56 1gvh_A Flavohemoprotein; oxido 24.5 98 0.0034 29.7 5.8 37 26-67 156-194 (396)
57 2lx9_A Ferrous iron transport 24.2 99 0.0034 22.9 4.5 39 55-93 2-42 (83)
58 2cnd_A NADH-dependent nitrate 23.4 1.1E+02 0.0038 27.4 5.7 37 26-67 16-54 (270)
59 1fdr_A Flavodoxin reductase; f 22.5 1.2E+02 0.0041 26.7 5.7 36 26-68 8-43 (248)
60 3rui_B Autophagy-related prote 22.5 3E+02 0.01 22.0 9.5 86 247-343 28-115 (118)
61 2gpj_A Siderophore-interacting 20.4 1.4E+02 0.0046 26.8 5.5 38 26-68 12-51 (252)
No 1
>3qfs_A CPR, P450R, NADPH--cytochrome P450 reductase; flavoprotein, FAD, oxidoreductase; HET: FAD NAP; 1.40A {Homo sapiens} PDB: 3qft_A*
Probab=100.00 E-value=4.7e-86 Score=678.36 Aligned_cols=386 Identities=34% Similarity=0.637 Sum_probs=353.1
Q ss_pred ccee-eEEEeeeecCCCCCCcEEEEEEEecCCCcccCCCCEEEEccCCCHHHHHHHHHHcCCCCCceEEEeeCCccCCCC
Q 014605 22 VCFL-KMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQDPAAVDTFIQRCNLDPDALITVQHKEMKNYLP 100 (421)
Q Consensus 22 ~~~~-~v~~~~~lt~~~~~~~v~~i~l~~~~~~~~y~~GD~l~v~p~N~~~~V~~~l~~l~l~~~~~v~~~~~~~~~~~~ 100 (421)
+.|. +|++|++||+ +++++|+||+|++++++++|+|||+|+|||.|+++.|+++|++||+++++.|++.........
T Consensus 61 ~p~~a~v~~n~~Lt~-~~~r~~~hie~dl~~s~l~Y~~GD~l~V~p~N~~~~V~~~l~~l~~~~d~~v~~~~~~~~~~~- 138 (458)
T 3qfs_A 61 NPFLAAVTTNRKLNQ-GTERHLMHLELDISDSKIRYESGDHVAVYPANDSALVNQLGKILGADLDVVMSLNNLDEESNK- 138 (458)
T ss_dssp SCEEEEEEEEEECCS-SSSSCEEEEEEECTTSCCCCCTTCEEEECCCCCHHHHHHHHHHHTCCTTCEEEEEESSTTCSC-
T ss_pred CCEEEEEEEEEEcCC-CCCCCEEEEEEEeCCCCcccCCCCEEEEEeeCCHHHHHHHHHHhCcCCCceEEecCCCccccc-
Confidence 4566 9999999998 468999999999998899999999999999999999999999999999999999764332221
Q ss_pred CccCCCCCccccHHHHHHhcccccCCCCcHHHHHHHHHhcCChhHHHHHHhhcCC--CChHHHHHHHHhcCCCHHHHhhh
Q 014605 101 DIHKNTTEVPIKLRTFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASP--EGRDDLYKYNQKERRTVLEVLED 178 (421)
Q Consensus 101 ~~~~~~~~~~~tl~~~l~~~~Dl~~~~p~~~~l~~la~~~~~~~~k~~L~~l~~~--~~~~~~~~~~~~~~~tl~d~l~~ 178 (421)
+.+++.++|++++|++|+||++ +|+++||+.||.||+|+.+|++|+.|++. +|.++|++|+.+++++++|+|.+
T Consensus 139 ---~~p~~~~~tl~~~l~~~~di~~-~p~~~~l~~la~~a~~~~ek~~L~~l~~~~~~~~~~~~~~~~~~~~~ildvL~~ 214 (458)
T 3qfs_A 139 ---KHPFPCPTSYRTALTYYLDITN-PPRTNVLYELAQYASEPSEQELLRKMASSSGEGKELYLSWVVEARRHILAILQD 214 (458)
T ss_dssp ---CCSSSSSEEHHHHHHHTBCCSS-CCCHHHHHHHGGGBCSHHHHHHHHHHHSCSHHHHHHHHHHTTTTTCCHHHHHHH
T ss_pred ---CCCCCCCeeHHHHHHhcEeccC-CCCHHHHHHHHHHcCCHHHHHHHHHHhccCcccHHHHHHHHhhcCCCHHHHHHh
Confidence 2356889999999999999999 99999999999999999999999999974 57889999999999999999999
Q ss_pred CCCCCCCHHHHHHhcCCCCCCceeeccCCCCCCCeEEEEEEEEEecCCCCCccCCccchhhhccCCCCCc------eEEE
Q 014605 179 FPSVQMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGI------YIPA 252 (421)
Q Consensus 179 f~s~~~p~~~ll~~lp~~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~~~~~~G~~S~~L~~l~~~~G~------~v~i 252 (421)
||++++|+++|++.+|+++||+|||||+|..+++.++|+|++|+|++..++.+.|+||+||+++.+ |+ .|.+
T Consensus 215 fps~~~p~~~ll~~lp~l~pR~YSIsSsp~~~~~~i~ltV~vv~~~~~~~r~~~G~~S~~L~~l~~--gg~~~~~~~v~v 292 (458)
T 3qfs_A 215 CPSLRPPIDHLCELLPRLQARYYSIASSSKVHPNSVHICAVVVEYETKAGRINKGVATNWLRAKEP--VGENGGRALVPM 292 (458)
T ss_dssp STTBCCCHHHHHHHSCBCCCEEEECCSCTTTCTTEEEEEEECCEEECTTSCEEECHHHHHHHTCCS--SCSSCCCCEEEE
T ss_pred CCccCCCHHHHHhhCCCCcceeEeeccCcccCCCEEEEEEEEEEecCCCCCCCCCchhHHHHhhcc--CCccCCceEEEE
Confidence 999999999999999999999999999998778999999999999998888999999999999876 54 6999
Q ss_pred EeecCCCCCC-CCCCCeEEEeCCCcchhHHHHHHHHHHhcCCC-CCCCEEEEEcccCC-CccccHHHHHHhhhcCCCccc
Q 014605 253 WFQKGSLPRP-PPSVPLILIGPGTGCAPFRGFVEERAIQSSSG-PAAPIIFFFGCRNE-DDFLYRELWLSHSLNDGVFSE 329 (421)
Q Consensus 253 ~~~~g~F~lp-~~~~piimIa~GTGIAPf~s~l~~~~~~~~~~-~~~~~~L~~G~R~~-~d~ly~del~~~~~~~g~l~~ 329 (421)
++|.|.|.+| ++.+|+||||+|||||||++|++++......+ ..++++||||||++ .|++|++||++|.+. |.++
T Consensus 293 ~~p~g~F~lp~~~~~piImIggGTGIAPfrs~lq~r~~l~~~g~~~~~~~Lf~G~R~~~~D~ly~dEl~~l~~~-g~l~- 370 (458)
T 3qfs_A 293 FVRKSQFRLPFKATTPVIMVGPGTGVAPFIGFIQERAWLRQQGKEVGETLLYYGCRRSDEDYLYREELAQFHRD-GALT- 370 (458)
T ss_dssp EEECCSCCCCSSTTSCEEEECCGGGGHHHHHHHHHHHHHHHHTCCCCCEEEEEEESCTTTSCTTHHHHHHHHHH-TSSS-
T ss_pred EecCCCcccCCCCCCceEEEcCCcchhhHHHHHHHHHHHHhcCCCCCCEEEEEEeCCchHhhhHHHHHHHHHHc-CCCC-
Confidence 9999999999 77899999999999999999999986422111 13789999999997 599999999999988 6665
Q ss_pred cCCCcEEEEeccCCCCcccchhhHHHcHHHHHHHhcCCCEEEEeCCCCccHHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 014605 330 AKGGGFYVAFSRKQPQKVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKAL 409 (421)
Q Consensus 330 ~~~~~~~~a~Sr~~~~k~yVqd~l~~~~~~v~~~l~~~~~iyVCG~~~~m~~~V~~~L~~i~~~~~~~~~~~a~~~l~~l 409 (421)
++++||||+++.++||||.|.++.+.+|+++.+++.||||||++.|+++|.++|.+|++++++++.++|++|+++|
T Consensus 371 ----~l~~a~SRd~~~k~yVqd~l~~~~~~l~~~l~~~~~vYvCGp~~~M~~~V~~~L~~i~~~~g~~~~~~A~~~~~~l 446 (458)
T 3qfs_A 371 ----QLNVAFSREQSHKVYVQHLLKQDREHLWKLIEGGAHIYVCGDARNMARDVQNTFYDIVAELGAMEHAQAVDYIKKL 446 (458)
T ss_dssp ----EEEEEETTSSSSCCCHHHHHHHTHHHHHHHHHTTCEEEEEEETTTHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred ----EEEEEEECCCCCcccHhHHHHHhHHHHHHHhcCCCEEEEECCCHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 8999999999889999999999999999999889999999997689999999999999999999999999999999
Q ss_pred HHCCCEEEeecC
Q 014605 410 QRAGRYHVEAWS 421 (421)
Q Consensus 410 ~~~~Ry~~dvWs 421 (421)
+++|||++||||
T Consensus 447 ~~~~RY~~Dvws 458 (458)
T 3qfs_A 447 MTKGRYSLDVWS 458 (458)
T ss_dssp HHTTSEEEEEEC
T ss_pred HHCCCeEEEecC
Confidence 999999999998
No 2
>2qtl_A MSR;, methionine synthase reductase; alpha-beta-alpha structural motif, flattened antiparallel BE barrel, flexible hinge region, connecting domain; HET: FAD; 1.90A {Homo sapiens} PDB: 2qtz_A*
Probab=100.00 E-value=1.7e-82 Score=664.89 Aligned_cols=387 Identities=28% Similarity=0.525 Sum_probs=345.3
Q ss_pred ccee-eEEEeeeecCCCCCCcEEEEEEEecCCCcccCCCCEEEEccCCCHHHHHHHHHHcCCCC--CceEEEeeCCcc--
Q 014605 22 VCFL-KMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQDPAAVDTFIQRCNLDP--DALITVQHKEMK-- 96 (421)
Q Consensus 22 ~~~~-~v~~~~~lt~~~~~~~v~~i~l~~~~~~~~y~~GD~l~v~p~N~~~~V~~~l~~l~l~~--~~~v~~~~~~~~-- 96 (421)
+.|. +|++|++||+++++++|+||+|++++++++|+|||+|+|+|.|+++.|+++|++||+++ +..|++.+....
T Consensus 113 ~~~~a~v~~~~~Lt~~~~~r~v~hield~~~~~l~Y~~GD~l~V~P~N~~~~V~~~l~~lgl~~~~~~~v~~~~~~~~~~ 192 (539)
T 2qtl_A 113 PVFQVPISKAVQLTTNDAIKTTLLVELDISNTDFSYQPGDAFSVICPNSDSEVQSLLQRLQLEDKREHCVLLKIKADTKK 192 (539)
T ss_dssp CCEEEEEEEEEECSCTTCSSCEEEEEEECTTSCCCCCTTCEEEEECCCCHHHHHHHHHHTTCGGGTTSEEEEEECTTCCC
T ss_pred CCEEEEEEeeEEcCCCCCCCcEEEEEEecCCCCcCcCCCCEEEEEeCCCHHHHHHHHHHhCCCccCCeEEEEeccccccC
Confidence 4466 99999999999999999999999998889999999999999999999999999999986 467877654321
Q ss_pred --CCCCCccCCCCCccccHHHHHHhcccccCCCCcHHHHHHHHHhcCChhHHHHHHhhcCCCChHHHHHHHHhcCCCHHH
Q 014605 97 --NYLPDIHKNTTEVPIKLRTFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASPEGRDDLYKYNQKERRTVLE 174 (421)
Q Consensus 97 --~~~~~~~~~~~~~~~tl~~~l~~~~Dl~~~~p~~~~l~~la~~~~~~~~k~~L~~l~~~~~~~~~~~~~~~~~~tl~d 174 (421)
..+ ..++|.++|++++|++|+||++ +|++.||+.||.||+|+.+|++|.+|++.+|.++|++|+.+++++++|
T Consensus 193 ~~~~~----p~~~p~~~tl~~~L~~~lDi~~-~p~~~~l~~la~~a~d~~ek~~L~~l~s~~~~~~~~~~~~~~~~~lld 267 (539)
T 2qtl_A 193 KGATL----PQHIPAGCSLQFIFTWCLEIRA-IPKKAFLRALVDYTSDSAEKRRLQELCSKQGAADYSRFVRDACACLLD 267 (539)
T ss_dssp TTCCC----CTTSCTTCBHHHHHHHTBCTTS-CCCHHHHHHHHTTBCSHHHHHHHHHHHSSTTHHHHHHHTTTTTCCHHH
T ss_pred CCccC----CCCCCCcccHHHHHHHHhhhcC-CCCHHHHHHHHHHcCCHHHHHHHHHHhChhhHHHHHHHHhhcCCCHHH
Confidence 112 2357889999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred HhhhCCCCCCCHHHHHHhcCCCCCCceeeccCCCCCCCeEEEEEEEEEecC--CCCCccCCccchhhhcc----------
Q 014605 175 VLEDFPSVQMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTT--PYKRKRTGLCSVWLAGL---------- 242 (421)
Q Consensus 175 ~l~~f~s~~~p~~~ll~~lp~~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~--~~~~~~~G~~S~~L~~l---------- 242 (421)
+|.+||++++|+++|+..+|++++|+|||||+|..+++.++|+|++|+|++ ..++.+.|+||+||+++
T Consensus 268 vL~~fps~~~p~~~ll~~lp~l~~R~YSIsSsp~~~~~~i~ltV~~v~~~~~~~~~~~~~G~~S~~L~~l~~~~~~~~~~ 347 (539)
T 2qtl_A 268 LLLAFPSCQPPLSLLLEHLPKLQPRPYSCASSSLFHPGKLHFVFNIVEFLSTATTEVLRKGVCTGWLALLVASVLQPNIH 347 (539)
T ss_dssp HHHHSTTBCCCHHHHHHHSCBCCCEEEECCSCTTTSTTEEEEEEECCEEECSCSSCSEEECHHHHHHHHHTTTTC-----
T ss_pred HHHhCCCcCCCHHHHHHhCcCCcceEEeecCCccCCCCEEEEEEEEEEeccCCCCCcCCCCchhhHHHHhhhhhcccccc
Confidence 999999999999999999999999999999999766899999999999954 34456789999999987
Q ss_pred -CCCCCc-------eEEEEeecC-CCCCC-CCCCCeEEEeCCCcchhHHHHHHHHHHhcCC---CCCCCEEEEEcccCCC
Q 014605 243 -DPQQGI-------YIPAWFQKG-SLPRP-PPSVPLILIGPGTGCAPFRGFVEERAIQSSS---GPAAPIIFFFGCRNED 309 (421)
Q Consensus 243 -~~~~G~-------~v~i~~~~g-~F~lp-~~~~piimIa~GTGIAPf~s~l~~~~~~~~~---~~~~~~~L~~G~R~~~ 309 (421)
++ |+ .|.++++.| .|.+| ++.+|+||||+||||||||||+++|...... ...++++||||||+++
T Consensus 348 ~~~--Gd~~~~~~~~V~v~~p~g~~F~Lp~~~~~piImIg~GTGIAPfrsflq~r~~~~~~~~~~~~~~v~LffG~R~~~ 425 (539)
T 2qtl_A 348 ASH--EDSGKALAPKISIFPRTTNSFHLPDDPSIPIIMVGPGTGIAPFIGFLQHREKLQEQHPDGNFGAMWLFFGCRHKD 425 (539)
T ss_dssp -----------CCCEEEEEECSCCCCCCCSSTTSCEEEECCGGGGHHHHHHHHHHHHHHHHCTTCCCCCEEEEEEESCTT
T ss_pred CCC--CCccccCceEEEEEeeeCCCccCCccCCCCEEEEEcCccHHHHHHHHHHHHHHHhccccCCCCCEEEEEEECCcc
Confidence 88 99 999999975 89999 7789999999999999999999998654311 1238999999999995
Q ss_pred -ccccHHHHHHhhhcCCCccccCCCcEEEEeccCCC------CcccchhhHHHcHHHHHHHh-cCCCEEEEeCCCCccHH
Q 014605 310 -DFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQP------QKVYVQHKMLEQSQRIWNLL-LSKASIYVAGSATKMPS 381 (421)
Q Consensus 310 -d~ly~del~~~~~~~g~l~~~~~~~~~~a~Sr~~~------~k~yVqd~l~~~~~~v~~~l-~~~~~iyVCG~~~~m~~ 381 (421)
|++|++||++|.+. |.+. ++++||||++. .++||||.|.++.+++|+++ ..+++|||||+++.|++
T Consensus 426 ~D~ly~dEL~~~~~~-g~~~-----~l~~afSRd~~~~~~~g~k~yVqd~l~e~~~~l~~~l~~~~a~vYVCGp~~~M~~ 499 (539)
T 2qtl_A 426 RDYLFRKELRHFLKH-GILT-----HLKVSFSRDAPVGEEEAPAKYVQDNIQLHGQQVARILLQENGHIYVCGDAKNMAK 499 (539)
T ss_dssp TCCTTHHHHHHHHHT-TSSC-----EEEEEESSSCC------CCCSHHHHHHHTHHHHHHHHHHSCCEEEEEESCHHHHH
T ss_pred hhhHHHHHHHHHHHh-CCCc-----EEEEEEccCCCccccCCCccchhHHHHHhHHHHHHhhccCCcEEEEECCCHHHHH
Confidence 99999999999987 5443 89999999976 69999999999999999998 45899999999768999
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCEEEeecC
Q 014605 382 DVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYHVEAWS 421 (421)
Q Consensus 382 ~V~~~L~~i~~~~~~~~~~~a~~~l~~l~~~~Ry~~dvWs 421 (421)
+|.++|.+|++++++++.++|++|+++|+++|||++||||
T Consensus 500 ~V~~~L~~i~~~~~~~~~~~A~~~l~~l~~~~RY~~Dvw~ 539 (539)
T 2qtl_A 500 DVHDALVQIISKEVGVEKLEAMKTLATLKEEKRYLQDIWS 539 (539)
T ss_dssp HHHHHHHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEC-
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCcEEEEcCC
Confidence 9999999999999999999999999999999999999997
No 3
>4dql_A Bifunctional P-450/NADPH-P450 reductase; rossmann fold, redox, FAD and NADP+ binding, oxidoreductase; HET: FAD NAP 1PE PG4; 2.15A {Bacillus megaterium} PDB: 4dqk_A*
Probab=100.00 E-value=9.6e-83 Score=644.52 Aligned_cols=377 Identities=29% Similarity=0.507 Sum_probs=339.2
Q ss_pred ee-eEEEeeeecCCCCCCcEEEEEEEecCCCcccCCCCEEEEccCCCHHHHHHHHHHcCCCCCceEEEeeCCcc-CCCCC
Q 014605 24 FL-KMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQDPAAVDTFIQRCNLDPDALITVQHKEMK-NYLPD 101 (421)
Q Consensus 24 ~~-~v~~~~~lt~~~~~~~v~~i~l~~~~~~~~y~~GD~l~v~p~N~~~~V~~~l~~l~l~~~~~v~~~~~~~~-~~~~~ 101 (421)
|. +|++|++||+++++++|+||+|+++ ++++|+|||+|+|+|.|+++.|+++|++||+++++.|++...... ..+
T Consensus 7 ~~a~v~~n~~Lt~~~~~~~~~hie~~l~-~~~~Y~~GD~l~v~p~N~~~~V~~~l~~l~l~~~~~v~~~~~~~~~~~~-- 83 (393)
T 4dql_A 7 FSTNVVASKELQQPGSARSTRHLEIELP-KEASYQEGDHLGVIPRNYEGIVNRVTARFGLDASQQIRLEAEEEKLAHL-- 83 (393)
T ss_dssp EEEEEEEEEECSCTTCSCCEEEEEEECC-TTCCCCTTCEEEECCCCCHHHHHHHHHHHTCCTTCEECCCC----------
T ss_pred EEEEEEeEEEcCCCCCCceEEEEEEECC-CCCccCCCCEEEEEccCCHHHHHHHHHHhCcCCCCeEEEeCCCCccccC--
Confidence 45 9999999999999999999999998 689999999999999999999999999999999998887542211 123
Q ss_pred ccCCCCCccccHHHHHHhcccccCCCCcHHHHHHHHHhcCChhHHHHHHhhcCCCChHHHHHHHHhcCCCHHHHhhhCCC
Q 014605 102 IHKNTTEVPIKLRTFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASPEGRDDLYKYNQKERRTVLEVLEDFPS 181 (421)
Q Consensus 102 ~~~~~~~~~~tl~~~l~~~~Dl~~~~p~~~~l~~la~~~~~~~~k~~L~~l~~~~~~~~~~~~~~~~~~tl~d~l~~f~s 181 (421)
+++.|+|++++|++ +||++ +|+++||+.||.||+|+.+|++|+.|++. +.|.+|+.++++|++|+|.+||+
T Consensus 84 ----p~~~~~tl~~~l~~-~di~~-~~~~~~l~~la~~~~~~~~~~~L~~l~~~---~~~~~~~~~~~~~~ldvL~~fps 154 (393)
T 4dql_A 84 ----PLAKTVSVEELLQY-VELQD-PVTRTQLRAMAAKTVCPPHKVELEALLEK---QAYKEQVLAKRLTMLELLEKYPA 154 (393)
T ss_dssp -------CCEEHHHHTTS-BCSSS-BCCHHHHHHHHHTCCSHHHHHHHHHTTSH---HHHHHHTTTTTCBHHHHHHHCTT
T ss_pred ----CCCCcEEHHHHHHh-ccccC-CCCHHHHHHHHHhCCCHHHHHHHHHHhCc---hHHHHHHhccCCCHHHHHHhCCC
Confidence 35789999999999 99999 99999999999999999999999999873 37999999999999999999999
Q ss_pred CCCCHHHHHHhcCCCCCCceeeccCCCCCCCeEEEEEEEEEecCCCCC-ccCCccchhhhccCCCCCceEEE--EeecCC
Q 014605 182 VQMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKR-KRTGLCSVWLAGLDPQQGIYIPA--WFQKGS 258 (421)
Q Consensus 182 ~~~p~~~ll~~lp~~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~~~-~~~G~~S~~L~~l~~~~G~~v~i--~~~~g~ 258 (421)
+++|+++|+..+|+++||+|||||+|..+++.++|+|+++.+++..++ .+.|.||+||+++++ |+.|.+ .+|.|.
T Consensus 155 ~~~p~~~~l~~lp~l~~R~YSIsSsp~~~~~~i~l~v~vv~~~~~~g~~~~~G~~S~~L~~l~~--Gd~v~v~v~~P~g~ 232 (393)
T 4dql_A 155 CEMKFSEFIALLPSIRPRYYSISSSPRVDEKQASITVSVVSGEAWSGYGEYKGIASNYLAELQE--GDTITCFISTPQSE 232 (393)
T ss_dssp CCCCHHHHHHTSCBCCCEEEECCSCTTTCTTEEEEEEECCEEECTTSSSEEECHHHHHHHHCCT--TCEEEEEEECCSSC
T ss_pred CCCCHHHHHHhCCCCcceeeeccccccccCceEEEEEEEEecccCCCCcccCCccchhHHhCCC--cCEEEEEEEcCCCC
Confidence 999999999999999999999999998778999999999999876543 456999999999999 999995 457799
Q ss_pred CCCC-CCCCCeEEEeCCCcchhHHHHHHHHHHhcCCC-CCCCEEEEEcccCC-CccccHHHHHHhhhcCCCccccCCCcE
Q 014605 259 LPRP-PPSVPLILIGPGTGCAPFRGFVEERAIQSSSG-PAAPIIFFFGCRNE-DDFLYRELWLSHSLNDGVFSEAKGGGF 335 (421)
Q Consensus 259 F~lp-~~~~piimIa~GTGIAPf~s~l~~~~~~~~~~-~~~~~~L~~G~R~~-~d~ly~del~~~~~~~g~l~~~~~~~~ 335 (421)
|.+| ++.+|+||||+|||||||++|++++......+ ..++++||||||++ .|++|++||+++.+. |++ ++
T Consensus 233 F~lp~~~~~piImIg~GtGIAPf~s~l~~r~~~~~~g~~~~~v~L~~G~R~~~~d~ly~~el~~~~~~-~~l------~l 305 (393)
T 4dql_A 233 FTLPKDPETPLIMVGPGTGVAPFRGFVQARKQLKEQGQSLGEAHLYFGCRSPHEDYLYQEELENAQSE-GII------TL 305 (393)
T ss_dssp CCCCSSTTSCEEEECCGGGGHHHHHHHHHHHHHHHTTCCCCCEEEEEEESCTTTCCTTHHHHHHHHHT-TSC------EE
T ss_pred cccCccCCCCeEEEccCceechHHHHHHHHHHHHhcCCCCCCEEEEEEECCcchhhHHHHHHHHHHhC-CCe------EE
Confidence 9999 77889999999999999999999986543222 24789999999996 599999999999987 999 99
Q ss_pred EEEecc-CCCCcccchhhHHHcHHHHHHHhcCCCEEEEeCCCCccHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCC
Q 014605 336 YVAFSR-KQPQKVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGR 414 (421)
Q Consensus 336 ~~a~Sr-~~~~k~yVqd~l~~~~~~v~~~l~~~~~iyVCG~~~~m~~~V~~~L~~i~~~~~~~~~~~a~~~l~~l~~~~R 414 (421)
+++||| ++..++||||.++++.+.+++++.+++.||||||+..|.++|+++|.+|++++++++.++|++|+++|+++||
T Consensus 306 ~~a~Sr~~~~~k~yVq~~l~~~~~~l~~~l~~~~~vYvCGp~~~M~~~V~~~L~~i~~~~~~~~~~~a~~~~~~l~~~~R 385 (393)
T 4dql_A 306 HTAFSRMPNQPKTYVQHVMEQDGKKLIELLDQGAHFYICGDGSQMAPAVEATLMKSYADVHQVSEADARLWLQQLEEKGR 385 (393)
T ss_dssp EEEESSCTTSCCCCHHHHHHHTHHHHHHHHHTTCEEEEEEETTTHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHTTC
T ss_pred EEEEeCCCCCCCcchhhHHHhCHHHHHHHHhCCcEEEEECCchhhHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHCCC
Confidence 999999 5667999999999999999999988999999999769999999999999999999999999999999999999
Q ss_pred EEEeecC
Q 014605 415 YHVEAWS 421 (421)
Q Consensus 415 y~~dvWs 421 (421)
|++||||
T Consensus 386 y~~dv~s 392 (393)
T 4dql_A 386 YAKDVWA 392 (393)
T ss_dssp EEEEEEC
T ss_pred EEEEecc
Confidence 9999997
No 4
>3qe2_A CPR, P450R, NADPH--cytochrome P450 reductase; cypor, antley-bixler syndrome, flavoprotein, FMN, FAD, oxidoreductase; HET: FAD FMN NAP; 1.75A {Homo sapiens} PDB: 3qfc_A* 3qfr_A* 1amo_A* 1j9z_A* 1ja0_A* 1ja1_A* 3es9_A* 3ojw_A* 3ojx_A* 3fjo_A* 1b1c_A*
Probab=100.00 E-value=2.6e-82 Score=674.97 Aligned_cols=387 Identities=34% Similarity=0.645 Sum_probs=354.7
Q ss_pred ccee-eEEEeeeecCCCCCCcEEEEEEEecCCCcccCCCCEEEEccCCCHHHHHHHHHHcCCCCCceEEEeeCCccCCCC
Q 014605 22 VCFL-KMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQDPAAVDTFIQRCNLDPDALITVQHKEMKNYLP 100 (421)
Q Consensus 22 ~~~~-~v~~~~~lt~~~~~~~v~~i~l~~~~~~~~y~~GD~l~v~p~N~~~~V~~~l~~l~l~~~~~v~~~~~~~~~~~~ 100 (421)
+.|. +|++|++||+ +++++|+||+|++++++++|+|||+|+|+|.|+++.|+++|++||+++++.|++.........
T Consensus 221 ~~~~a~v~~n~~Lt~-~~~~~~~hie~~~~~~~~~Y~~GD~l~V~p~N~~~~V~~~l~~l~l~~d~~v~~~~~~~~~~~- 298 (618)
T 3qe2_A 221 NPFLAAVTTNRKLNQ-GTERHLMHLELDISDSKIRYESGDHVAVYPANDSALVNQLGKILGADLDVVMSLNNLDEESNK- 298 (618)
T ss_dssp SCEEEEEEEEEECSC-CSSSCEEEEEEECTTSCCCCCTTCEEEECCCCCHHHHHHHHHHTTCCTTCEEEEEESCTTCSC-
T ss_pred CcEEEEEEeEEEcCC-CCCCcEEEEEEEcCCCCcccccCCEEEEEcCCCHHHHHHHHHHhCcCCCceEEEecCCccccC-
Confidence 3466 9999999996 467999999999998899999999999999999999999999999999999999765332221
Q ss_pred CccCCCCCccccHHHHHHhcccccCCCCcHHHHHHHHHhcCChhHHHHHHhhc--CCCChHHHHHHHHhcCCCHHHHhhh
Q 014605 101 DIHKNTTEVPIKLRTFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFA--SPEGRDDLYKYNQKERRTVLEVLED 178 (421)
Q Consensus 101 ~~~~~~~~~~~tl~~~l~~~~Dl~~~~p~~~~l~~la~~~~~~~~k~~L~~l~--~~~~~~~~~~~~~~~~~tl~d~l~~ 178 (421)
+.++|.|+|++++|++|+||++ +|+++||+.||.||+|+.+|++|+.|+ +.+|.++|++|+.+++++++|+|++
T Consensus 299 ---~~~~p~~~tl~~~l~~~~di~~-~p~~~~l~~la~~~~~~~~k~~L~~l~~~~~~~~~~~~~~~~~~~~~i~dvL~~ 374 (618)
T 3qe2_A 299 ---KHPFPCPTSYRTALTYYLDITN-PPRTNVLYELAQYASEPSEQELLRKMASSSGEGKELYLSWVVEARRHILAILQD 374 (618)
T ss_dssp ---CSSSSSSEEHHHHHHHTBCCSS-CCCHHHHHHHGGGBCSHHHHHHHHHTTCSSSHHHHHHHHHTTTTTCCHHHHHHH
T ss_pred ---CCCCCCceEHHHhhhhEeecCC-CCcHHHHHHHHHHcCCHHHHHHHHHhhccChhhHHHHHHHHhhcCCCHHHHHHh
Confidence 2357889999999999999999 999999999999999999999999999 6778999999999999999999999
Q ss_pred CCCCCCCHHHHHHhcCCCCCCceeeccCCCCCCCeEEEEEEEEEecCCCCCccCCccchhhhccCCCCCc-----eEEEE
Q 014605 179 FPSVQMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGI-----YIPAW 253 (421)
Q Consensus 179 f~s~~~p~~~ll~~lp~~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~~~~~~G~~S~~L~~l~~~~G~-----~v~i~ 253 (421)
||++++|+++|++.+|+++||+|||||+|..+++.++|+|++|+|++..++.+.|+||+||+++.+. |+ .|.++
T Consensus 375 fps~~~p~~~l~~~lp~l~pR~YSIsSsp~~~~~~i~ltv~vv~~~~~~~~~~~G~~S~~L~~l~~~-Gd~~~~~~v~v~ 453 (618)
T 3qe2_A 375 CPSLRPPIDHLCELLPRLQARYYSIASSSKVHPNSVHICAVVVEYETKAGRINKGVATNWLRAKEPV-GENGGRALVPMF 453 (618)
T ss_dssp STTBCCCHHHHHHHSCBCCCEEEECCSCTTTCTTEEEEEEECCEEECTTSCEEECHHHHHHHTCCCC------CCEEEEE
T ss_pred CCccCCCHHHHHHhccccccceeccccCCcCCCCEEEEEEEEEEEecCCCCCCCCcccHHHHhhccc-CCCCcceEEEEE
Confidence 9999999999999999999999999999988889999999999999988888999999999987541 66 99999
Q ss_pred eecCCCCCC-CCCCCeEEEeCCCcchhHHHHHHHHHHhcCCC-CCCCEEEEEcccCCC-ccccHHHHHHhhhcCCCcccc
Q 014605 254 FQKGSLPRP-PPSVPLILIGPGTGCAPFRGFVEERAIQSSSG-PAAPIIFFFGCRNED-DFLYRELWLSHSLNDGVFSEA 330 (421)
Q Consensus 254 ~~~g~F~lp-~~~~piimIa~GTGIAPf~s~l~~~~~~~~~~-~~~~~~L~~G~R~~~-d~ly~del~~~~~~~g~l~~~ 330 (421)
+|.|.|++| ++.+|+||||+|||||||++|++++......+ ..++++||||||+++ |++|++||++|.+. |.++
T Consensus 454 ~p~g~F~lp~~~~~piimIg~GtGIAPfrs~l~~r~~~~~~g~~~~~~~L~~G~R~~~~D~ly~~el~~~~~~-g~l~-- 530 (618)
T 3qe2_A 454 VRKSQFRLPFKATTPVIMVGPGTGVAPFIGFIQERAWLRQQGKEVGETLLYYGCRRSDEDYLYREELAQFHRD-GALT-- 530 (618)
T ss_dssp EECCSCCCCSSTTSCEEEECCGGGGHHHHHHHHHHHHHHHTTCCCCCEEEEEEESCTTTSCTTHHHHHHHHHH-TSSS--
T ss_pred EecCcccCCCCCCCCeEEEcCCcchhhHHHHHHHHHHHHhcCCCCCCEEEEEecCCCccccchHHHHHHHHhc-CCCc--
Confidence 999999999 77899999999999999999999998643222 247899999999996 99999999999988 7776
Q ss_pred CCCcEEEEeccCCCCcccchhhHHHcHHHHHHHhcCCCEEEEeCCCCccHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 014605 331 KGGGFYVAFSRKQPQKVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQ 410 (421)
Q Consensus 331 ~~~~~~~a~Sr~~~~k~yVqd~l~~~~~~v~~~l~~~~~iyVCG~~~~m~~~V~~~L~~i~~~~~~~~~~~a~~~l~~l~ 410 (421)
+++++|||++++++||||+++++.+.+++++.+++.||||||++.|+++|.++|.+|++++++++.++|++|+++|+
T Consensus 531 ---~l~~a~Srd~~~k~yVqd~l~~~~~~l~~~l~~~a~vYvCGp~~~M~~~V~~~L~~i~~~~g~~~~~~a~~~~~~l~ 607 (618)
T 3qe2_A 531 ---QLNVAFSREQSHKVYVQHLLKQDREHLWKLIEGGAHIYVCGDARNMARDVQNTFYDIVAELGAMEHAQAVDYIKKLM 607 (618)
T ss_dssp ---EEEEEETTSSSSCCCHHHHHHHTHHHHHHHHHHTCEEEEEEETTTHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred ---EEEEEEcCCCCCCCcHHHHHHHhHHHHHHHHhCCcEEEEECCchHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 89999999998899999999999999999997799999999976999999999999999999999999999999999
Q ss_pred HCCCEEEeecC
Q 014605 411 RAGRYHVEAWS 421 (421)
Q Consensus 411 ~~~Ry~~dvWs 421 (421)
++|||++||||
T Consensus 608 ~~~RY~~Dv~s 618 (618)
T 3qe2_A 608 TKGRYSLDVWS 618 (618)
T ss_dssp HTTSEEEEEEC
T ss_pred HcCCeEEeecC
Confidence 99999999998
No 5
>1f20_A Nitric-oxide synthase; nitric-xoide synthase, reductase domain, FAD, NADP+, oxidore; HET: FAD NAP; 1.90A {Rattus norvegicus} SCOP: b.43.4.1 c.25.1.4
Probab=100.00 E-value=1.6e-78 Score=621.71 Aligned_cols=387 Identities=30% Similarity=0.559 Sum_probs=342.8
Q ss_pred ccee-eEEEeeeecCCCCCCcEEEEEEEecCC-CcccCCCCEEEEccCCCHHHHHHHHHHcCC--CCCceEEEeeCCcc-
Q 014605 22 VCFL-KMIKNQPLTKSGSGKDVHHFEFEFVSA-AIEYEVGDVLEILPSQDPAAVDTFIQRCNL--DPDALITVQHKEMK- 96 (421)
Q Consensus 22 ~~~~-~v~~~~~lt~~~~~~~v~~i~l~~~~~-~~~y~~GD~l~v~p~N~~~~V~~~l~~l~l--~~~~~v~~~~~~~~- 96 (421)
+.|. +|++|++||+++++++++||+|+++++ +++|+|||+|+|+|.|+++.|+++|++||+ ++++.|+++.....
T Consensus 29 ~~~~a~v~~~~~l~~~~~~~~~~hiel~~~~~~~~~Y~~GD~l~V~p~N~~~~V~~~l~~l~~~~~~d~~v~~~~~~~~~ 108 (435)
T 1f20_A 29 RVSAARLLSRQNLQSPKSSRSTIFVRLHTNGNQELQYQPGDHLGVFPGNHEDLVNALIERLEDAPPANHVVKVEMLEERN 108 (435)
T ss_dssp CCEEEEEEEEEECSCTTCSSCEEEEEEECTTCGGGCCCTTCEEEECCCCCHHHHHHHHTTBSSCCCTTSCEEEEEEEEES
T ss_pred CcEEEEEEeEEECCCCCCCceEEEEEEECCCCCCCcCCCCCEEEEEecCCHHHHHHHHHHhCCCCCCCeEEEEecccccc
Confidence 3455 999999999999999999999999754 799999999999999999999999999976 66888988642110
Q ss_pred ---CCCCCc-cCCCCCccccHHHHHHhcccccCCCCcHHHHHHHHHhcCChhHHHHHHhhcCCCChHHHHHHHHhcCCCH
Q 014605 97 ---NYLPDI-HKNTTEVPIKLRTFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASPEGRDDLYKYNQKERRTV 172 (421)
Q Consensus 97 ---~~~~~~-~~~~~~~~~tl~~~l~~~~Dl~~~~p~~~~l~~la~~~~~~~~k~~L~~l~~~~~~~~~~~~~~~~~~tl 172 (421)
...+.+ ...++| ++|++++|++|+||++ +|+++||+.||.||+|+.+|++|++|++ +.+.|.+|+...++++
T Consensus 109 ~~~~~~~~~~~~~~~p-~~tl~~~l~~~~di~~-~p~~~~l~~la~~~~~~~~k~~L~~l~~--~~~~~~~~~~~~~~~i 184 (435)
T 1f20_A 109 TALGVISNWKDESRLP-PCTIFQAFKYYLDITT-PPTPLQLQQFASLATNEKEKQRLLVLSK--GLQEYEEWKWGKNPTM 184 (435)
T ss_dssp SSTTCEEEEEECCSSC-SBCHHHHHHHTBCCSS-CCCHHHHHHHHTTBCCHHHHHHHHHHTT--CSHHHHHHHHHHCCCH
T ss_pred CCCCccccccccCCCC-CccHHHHHHhceecCC-CCCHHHHHHHHHHCCCHHHHHHHHHhhc--CHHHHHHHHhccCCCH
Confidence 000000 123466 9999999999999999 9999999999999999999999999997 7799999999999999
Q ss_pred HHHhhhCCCCCCCHHHHHHhcCCCCCCceeeccCCCCCCCeEEEEEEEEEecCCCC--CccCCccchhhhccCCCCCceE
Q 014605 173 LEVLEDFPSVQMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYK--RKRTGLCSVWLAGLDPQQGIYI 250 (421)
Q Consensus 173 ~d~l~~f~s~~~p~~~ll~~lp~~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~~--~~~~G~~S~~L~~l~~~~G~~v 250 (421)
+|+|.+||++++|+++++..+|++++|+|||||+|..+++.++|+|++++|.++.+ +.+.|.||+||+++++ |+.|
T Consensus 185 ~~vl~~fps~~~p~~~l~~~lp~l~~R~YSIsSsp~~~~~~i~l~v~vv~~~~~~g~~~~~~G~~S~~L~~l~~--Gd~v 262 (435)
T 1f20_A 185 VEVLEEFPSIQMPATLLLTQLSLLQPRYYSISSSPDMYPDEVHLTVAIVSYHTRDGEGPVHHGVCSSWLNRIQA--DDVV 262 (435)
T ss_dssp HHHHHHSTTBCBCHHHHHHHSCBCCCEEEECCSCTTTSTTEEEEEEECCEEECGGGTSCEEECHHHHHHTTCCT--TCEE
T ss_pred HHHHHhCCcCCCCHHHHHHhCCCCCCccccccCCcccCCCeEEEEEEEEEEecCCCCCcccCCccchhHhhCCC--CCEE
Confidence 99999999999999999999999999999999999776799999999999977543 4668999999999999 9999
Q ss_pred EEEee-cCCCCCC-CCCCCeEEEeCCCcchhHHHHHHHHHHhcC--CCCCCCEEEEEcccCCC-ccccHHHHHHhhhcCC
Q 014605 251 PAWFQ-KGSLPRP-PPSVPLILIGPGTGCAPFRGFVEERAIQSS--SGPAAPIIFFFGCRNED-DFLYRELWLSHSLNDG 325 (421)
Q Consensus 251 ~i~~~-~g~F~lp-~~~~piimIa~GTGIAPf~s~l~~~~~~~~--~~~~~~~~L~~G~R~~~-d~ly~del~~~~~~~g 325 (421)
.+.++ .|.|.+| ++.+|+||||+|||||||++|++++..... ....++++||||||+++ |++|++||+++.+. +
T Consensus 263 ~v~~~~~g~F~lp~~~~~piilIagGtGIAP~~s~l~~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~~El~~~~~~-~ 341 (435)
T 1f20_A 263 PCFVRGAPSFHLPRNPQVPCILVGPGTGIAPFRSFWQQRQFDIQHKGMNPCPMVLVFGCRQSKIDHIYREETLQAKNK-G 341 (435)
T ss_dssp EEEEECCTTSSCCSCTTSCEEEECCGGGGHHHHHHHHHHHHHHHHHCCCCCCEEEEEEESCTTTSCTTHHHHHHHHHT-T
T ss_pred EEEEecCCCccCCCCCCCCEEEEECCcCcHHHHHHHHHHHHhhhhccCCCCCEEEEEeecccccchhHHHHHHHHHHc-C
Confidence 99995 5699999 678999999999999999999999987420 01138999999999998 99999999999987 5
Q ss_pred CccccCCCcEEEEeccCCCC-cccchhhHHHc-HHHHHHHhc-CCCEEEEeCCCCccHHHHHHHHHHHHHHhCCCCHHHH
Q 014605 326 VFSEAKGGGFYVAFSRKQPQ-KVYVQHKMLEQ-SQRIWNLLL-SKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSA 402 (421)
Q Consensus 326 ~l~~~~~~~~~~a~Sr~~~~-k~yVqd~l~~~-~~~v~~~l~-~~~~iyVCG~~~~m~~~V~~~L~~i~~~~~~~~~~~a 402 (421)
.+. +++++|||++.. ++|||+.+.++ .+.+++++. .++.||||||+ .|+++|.++|.+++.++++++.++|
T Consensus 342 ~~~-----~l~~a~Sr~~~~~k~yVq~~l~~~l~~~~~~~l~~~~~~vYvCGp~-~M~~~V~~~L~~i~~~~~~~~~~~a 415 (435)
T 1f20_A 342 VFR-----ELYTAYSREPDRPKKYVQDVLQEQLAESVYRALKEQGGHIYVCGDV-TMAADVLKAIQRIMTQQGKLSEEDA 415 (435)
T ss_dssp SEE-----EEEEEESSCTTSCCCCHHHHHHHHSHHHHHHHHHTSCCEEEEEECH-HHHHHHHHHHHHHHHHHTTCCHHHH
T ss_pred Ccc-----EEEEEECCCCCCCCcchhhHHHhhhHHHHHHHHhcCCcEEEEeCCh-hHHHHHHHHHHHHHHHcCCCCHHHH
Confidence 543 899999999764 89999999987 788888774 58999999998 8999999999999999999999999
Q ss_pred HHHHHHHHHCCCEEEeecC
Q 014605 403 ANWLKALQRAGRYHVEAWS 421 (421)
Q Consensus 403 ~~~l~~l~~~~Ry~~dvWs 421 (421)
++|+++|+++|||++|||+
T Consensus 416 ~~~~~~l~~~~RY~~Dv~~ 434 (435)
T 1f20_A 416 GVFISRLRDDNRYHEDIFG 434 (435)
T ss_dssp HHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHCCCEEEEecC
Confidence 9999999999999999997
No 6
>2bpo_A CPR, P450R, NADPH-cytochrom P450 reductase; NADPH-cytochrome P450 reductase, diflavin reductase, FAD, FMN-binding, electron transfer; HET: FAD FMN NAP; 2.9A {Saccharomyces cerevisiae} PDB: 2bn4_A* 2bf4_A*
Probab=100.00 E-value=1.5e-78 Score=652.72 Aligned_cols=384 Identities=28% Similarity=0.505 Sum_probs=344.3
Q ss_pred ccee-eEEEeeeecCCCCCCcEEEEEEEecCCCcccCCCCEEEEccCCCHHHHHHHHHHcCCCCCceEEEeeCCccCCCC
Q 014605 22 VCFL-KMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQDPAAVDTFIQRCNLDPDALITVQHKEMKNYLP 100 (421)
Q Consensus 22 ~~~~-~v~~~~~lt~~~~~~~v~~i~l~~~~~~~~y~~GD~l~v~p~N~~~~V~~~l~~l~l~~~~~v~~~~~~~~~~~~ 100 (421)
..|. +|++|++||+ +++++|+||+|++++++++|+|||+|+|+|.|+++.|+++|++||+++++.|++.+.....
T Consensus 258 ~p~~a~v~~~~~L~~-~~~~~~~hie~d~~~~~~~Y~~GD~l~V~P~N~~~~V~~~l~~l~l~~d~~v~~~~~~~~~--- 333 (682)
T 2bpo_A 258 QPYIAPIVKSRELFS-SNDRNCIHSEFDLSGSNIKYSTGDHLAVWPSNPLEKVEQFLSIFNLDPETIFDLKPLDPTV--- 333 (682)
T ss_dssp BCCCEEEEEEEECCC-CSSCCEEEEEEECTTBTCCCCTTCEEEECCCCCHHHHHHHHHHHTCCTTCEEECCBSSTTC---
T ss_pred CceEEEEEEEEEccC-CCCCCEEEEEEEcCCCCceecCCCEEEEEcCCCHHHHHHHHHHhhccCCcEEEEecCCccc---
Confidence 3455 9999999998 7889999999999878999999999999999999999999999999999999987543321
Q ss_pred CccCCCCCccccHHHHHHhcccccCCCCcHHHHHHHHHhcCChhHHHHHHhhcCCCChHHHHHHHHhcCCCHHHHhhhCC
Q 014605 101 DIHKNTTEVPIKLRTFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASPEGRDDLYKYNQKERRTVLEVLEDFP 180 (421)
Q Consensus 101 ~~~~~~~~~~~tl~~~l~~~~Dl~~~~p~~~~l~~la~~~~~~~~k~~L~~l~~~~~~~~~~~~~~~~~~tl~d~l~~f~ 180 (421)
..+||.++|++++|++|+||++ +|+++||+.||.||+|+.+|++|++|+ ++.++|.+|+.++++|++|+|.+||
T Consensus 334 ---~~p~p~~~tl~~~l~~~ldi~~-~p~~~~l~~la~~a~~~~~k~~L~~l~--~~~~~~~~~~~~~~~~i~dvL~~fp 407 (682)
T 2bpo_A 334 ---KVPFPTPTTIGAAIKHYLEITG-PVSRQLFSSLIQFAPNADVKEKLTLLS--KDKDQFAVEITSKYFNIADALKYLS 407 (682)
T ss_dssp ---CCSSCSSEEHHHHHHHTBCCSS-CCCHHHHHHHSTTCSSHHHHHHHHHHT--TCHHHHHHHTGGGTCCHHHHHHHHH
T ss_pred ---CCCCCCCccHHHHHHHhhhccC-CCCHHHHHHHHHHCCCHHHHHHHHHhc--cCHHHHHHHHhcCCCCHHHHHHhcc
Confidence 2346899999999999999999 999999999999999999999999999 6999999999999999999999999
Q ss_pred ----CCCCCHHHHHHhcCCCCCCceeeccCCCCCCCeEEEEEEEEEecCCC---CCccCCccchhhhccCCC--------
Q 014605 181 ----SVQMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPY---KRKRTGLCSVWLAGLDPQ-------- 245 (421)
Q Consensus 181 ----s~~~p~~~ll~~lp~~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~---~~~~~G~~S~~L~~l~~~-------- 245 (421)
++++|+++++..+|+++||+|||||+|..+++.++|+|++++|+++. ++.+.|+||+||+++++.
T Consensus 408 ~~~~s~~~p~~~l~~~lp~l~~R~YSIsSsp~~~~~~i~ltv~Vv~~~~~~~~~~~~~~G~~S~~L~~l~~g~~~~~~~~ 487 (682)
T 2bpo_A 408 DGAKWDTVPMQFLVESVPQMTPRYYSISSSSLSEKQTVHVTSIVENFPNPELPDAPPVVGVTTNLLRNIQLAQNNVNIAE 487 (682)
T ss_dssp TTCCCTTSCHHHHHHHSCBCCCEEEEBCSCTTTCTTEEEEEEECCEECCSSCTTSCCEECHHHHHHHHHHHHHTTCCTTT
T ss_pred CcccccCCCHHHHHHhCcccccccccccCCcccCCCeEEEEEEEEEEecCcccCCcccCccccHHHHhcccccccccccc
Confidence 89999999999999999999999999987789999999999999876 677899999999987650
Q ss_pred --CC--------------ceEEEEeecCCCCCC-CCCCCeEEEeCCCcchhHHHHHHHHHHhcC------CC-CCCCEEE
Q 014605 246 --QG--------------IYIPAWFQKGSLPRP-PPSVPLILIGPGTGCAPFRGFVEERAIQSS------SG-PAAPIIF 301 (421)
Q Consensus 246 --~G--------------~~v~i~~~~g~F~lp-~~~~piimIa~GTGIAPf~s~l~~~~~~~~------~~-~~~~~~L 301 (421)
.| ..|.++++.+.|++| ++.+|+||||+||||||||||++++..+.. .+ ..++++|
T Consensus 488 ~~~G~~v~i~GP~G~f~~~~v~v~vr~~~F~Lp~~~~~piImIg~GTGIAPfrs~lq~r~~~~~~~~~~~~g~~~~~~~L 567 (682)
T 2bpo_A 488 TNLPVHYDLNGPRKLFANYKLPVHVRRSNFRLPSNPSTPVIMIGPGTGVAPFRGFIRERVAFLESQKKGGNNVSLGKHIL 567 (682)
T ss_dssp SCCCCCCCSSCGGGTTTTTEECEEEECCSCCCCSSTTSCEEEEEEGGGGHHHHHHHHHHHHHHHTCC----CCCCCCEEE
T ss_pred cccccceeeccCcCcccCceEEEEEecCcccCCCCCCCCEEEEecCcChHHHHHHHHHHHHhhcccccccccCCcCCEEE
Confidence 02 356666666678999 678999999999999999999999987643 11 2489999
Q ss_pred EEcccCCCccccHHHHHHhhhcCCCccccCCCcEEEEecc-CCCCcccchhhHHHcHHHHHHHhcCCCEEEEeCCCCccH
Q 014605 302 FFGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSR-KQPQKVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMP 380 (421)
Q Consensus 302 ~~G~R~~~d~ly~del~~~~~~~g~l~~~~~~~~~~a~Sr-~~~~k~yVqd~l~~~~~~v~~~l~~~~~iyVCG~~~~m~ 380 (421)
|||||++.|++|++||++|....|... ++++|||| ++..++||||.|.++.+.+++++.+++.||||||+..|+
T Consensus 568 ~fG~R~~~D~ly~dEl~~~~~~~g~~~-----~l~~afSr~d~~~k~yVqd~l~e~~~~l~~~l~~~~~vYvCGpa~~M~ 642 (682)
T 2bpo_A 568 FYGSRNTDDFLYQDEWPEYAKKLDGSF-----EMVVAHSRLPNTKKVYVQDKLKDYEDQVFEMINNGAFIYVCGDAKGMA 642 (682)
T ss_dssp EEEESSSSSCTTTTTHHHHHHHHGGGE-----EEEEEESCCTTSCCCCHHHHHHHTHHHHHHHHTTTCEEEEEECSTTHH
T ss_pred EEecCChhhhhhHHHHHHHHHhcCCce-----EEEEEECCCCCCCCcchHHHHHhhHHHHHHHHhCCcEEEEeCCchHhH
Confidence 999999999999999999953225332 89999999 666799999999999999999997799999999954999
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCEEEeec
Q 014605 381 SDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYHVEAW 420 (421)
Q Consensus 381 ~~V~~~L~~i~~~~~~~~~~~a~~~l~~l~~~~Ry~~dvW 420 (421)
++|.++|.+|++++++++.++|++|+++|+++|||++|||
T Consensus 643 ~~V~~~L~~i~~~~~~~~~~~a~~~~~~l~~~~Ry~~Dvw 682 (682)
T 2bpo_A 643 KGVSTALVGILSRGKSITTDEATELIKMLKTSGRYQEDVW 682 (682)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTSEEEEEC
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCEEEEeC
Confidence 9999999999999999999999999999999999999999
No 7
>1ddg_A Sulfite reductase (NADPH) flavoprotein alpha- component; cytochrome P450 reductase, FNR, modular protein, oxidoreductase; HET: FAD; 2.01A {Escherichia coli} SCOP: b.43.4.1 c.25.1.4 PDB: 1ddi_A*
Probab=100.00 E-value=1.5e-76 Score=596.14 Aligned_cols=359 Identities=30% Similarity=0.523 Sum_probs=330.2
Q ss_pred cee-eEEEeeeecCCCCCCcEEEEEEEecCCCcccCCCCEEEEccCCCHHHHHHHHHHcCCCCCceEEEeeCCccCCCCC
Q 014605 23 CFL-KMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQDPAAVDTFIQRCNLDPDALITVQHKEMKNYLPD 101 (421)
Q Consensus 23 ~~~-~v~~~~~lt~~~~~~~v~~i~l~~~~~~~~y~~GD~l~v~p~N~~~~V~~~l~~l~l~~~~~v~~~~~~~~~~~~~ 101 (421)
.|. +|++|++||+++++++|+||+|++++++++|+|||+|+|+|+|+++.|+++|++||+++++.|++.
T Consensus 11 ~~~a~v~~~~~lt~~~~~~~~~hi~~~~~~~~~~y~~GD~l~v~p~N~~~~V~~~l~~l~~~~~~~v~~~---------- 80 (374)
T 1ddg_A 11 PLVASLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGDEPVTVE---------- 80 (374)
T ss_dssp CEEEEEEEEEECSCTTCSSEEEEEEEECTTSCCCCCTTCEEEECCCCCHHHHHHHHHHTTCCSCSEEEET----------
T ss_pred CEEEEEEEEEEeCCCCCCceEEEEEEEcCCCCcccCCCCEEEEEcCCCHHHHHHHHHHhCCCCCceEEEC----------
Confidence 355 999999999999999999999999878899999999999999999999999999999999999873
Q ss_pred ccCCCCCccccHHHHHHhcccccCCCCcHHHHHHHHHhcCChhHHHHHHhhcCCCChHHHHHHHHhcCCCHHHHhhhCCC
Q 014605 102 IHKNTTEVPIKLRTFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASPEGRDDLYKYNQKERRTVLEVLEDFPS 181 (421)
Q Consensus 102 ~~~~~~~~~~tl~~~l~~~~Dl~~~~p~~~~l~~la~~~~~~~~k~~L~~l~~~~~~~~~~~~~~~~~~tl~d~l~~f~s 181 (421)
+.++|++++|++|+||+. |+++||+.||.||+|+. |.+|++ +.+.|.+|+. +++++|+|.+||+
T Consensus 81 ------~~~~tl~~~l~~~~di~~--p~~~~l~~la~~~~~~~----L~~l~~--~~~~~~~~~~--~~~~~~vl~~~p~ 144 (374)
T 1ddg_A 81 ------GKTLPLNEALQWHFELTV--NTANIVENYATLTRSET----LLPLVG--DKAKLQHYAA--TTPIVDMVRFSPA 144 (374)
T ss_dssp ------TEEEEHHHHHHHHBCCSC--CCHHHHHHHHHHHTCTT----TGGGTT--CTHHHHHHHH--HSCHHHHHHHSCC
T ss_pred ------CCCccHHHHHHhcccCCC--CCHHHHHHHHHHCCCHH----HHHHhc--ChHHHHHHHc--CCCHHHHHHHCCC
Confidence 358999999999999995 79999999999999974 888884 7788999987 5899999999998
Q ss_pred CCCCHHHHHHhcCCCCCCceeeccCCCCCCCeEEEEEEEEEecCCCCCccCCccchhhhc-cCCCCCceEEEEeec-CCC
Q 014605 182 VQMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAG-LDPQQGIYIPAWFQK-GSL 259 (421)
Q Consensus 182 ~~~p~~~ll~~lp~~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~~~~~~G~~S~~L~~-l~~~~G~~v~i~~~~-g~F 259 (421)
.++.++++..++++.+|+|||||+|..+++.++|+|++++|+++ ++.+.|.||+||++ +++ |+.|.+.++. |.|
T Consensus 145 -~~~~Gq~v~l~~~~~~R~YSIaSsp~~~~~~i~l~V~~v~~~~~-~~~~~G~~S~~L~~~l~~--Gd~v~v~~~~~g~F 220 (374)
T 1ddg_A 145 -QLDAEALINLLRPLTPRLYSIASSQAEVENEVHVTVGVVRYDVE-GRARAGGASSFLADRVEE--EGEVRVFIEHNDNF 220 (374)
T ss_dssp -CCCHHHHHHHSCBCCCEEEEBCCCTTTSCSEEEEEEEECEEEET-TEEEECHHHHHHHHSCCS--SCEEEEEEECCTTS
T ss_pred -CCCHHHHHhhccCCCCccceecCCCCCCCCEEEEEEEEEEeecC-CCCCCCCchHHHHhcCCC--CCEEEEEEeeCCCc
Confidence 88888888888999999999999997667999999999999886 66678999999997 999 9999999954 599
Q ss_pred CCC-CCCCCeEEEeCCCcchhHHHHHHHHHHhcCCCCCCCEEEEEcccCC-CccccHHHHHHhhhcCCCccccCCCcEEE
Q 014605 260 PRP-PPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNE-DDFLYRELWLSHSLNDGVFSEAKGGGFYV 337 (421)
Q Consensus 260 ~lp-~~~~piimIa~GTGIAPf~s~l~~~~~~~~~~~~~~~~L~~G~R~~-~d~ly~del~~~~~~~g~l~~~~~~~~~~ 337 (421)
.+| ++.+|+||||+|||||||++|++++...+.. ++++||||||++ .|++|++||+++.+. +.+. ++++
T Consensus 221 ~lp~~~~~piimIa~GtGIAP~~s~l~~~~~~~~~---~~~~L~~G~R~~~~d~ly~~El~~~~~~-~~~~-----~l~~ 291 (374)
T 1ddg_A 221 RLPANPETPVIMIGPGTGIAPFRAFMQQRAADEAP---GKNWLFFGNPHFTEDFLYQVEWQRYVKE-GVLT-----RIDL 291 (374)
T ss_dssp CCCSSTTSCEEEECCGGGGHHHHHHHHHHHHHTCC---SCEEEEEEESCHHHHCTTHHHHHHHHHT-TSCC-----EEEE
T ss_pred cCCCCCCCCEEEEECCccHHHHHHHHHHHHhcCCC---CCEEEEEEeCCchhhhhHHHHHHHHHHh-CCCc-----EEEE
Confidence 999 6789999999999999999999999887654 899999999998 599999999999887 5443 8999
Q ss_pred EeccCCCCcccchhhHHHcHHHHHHHhcCCCEEEEeCCCCccHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCEEE
Q 014605 338 AFSRKQPQKVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYHV 417 (421)
Q Consensus 338 a~Sr~~~~k~yVqd~l~~~~~~v~~~l~~~~~iyVCG~~~~m~~~V~~~L~~i~~~~~~~~~~~a~~~l~~l~~~~Ry~~ 417 (421)
+|||+++.++|||+.|.++.+.+++++.+++.|||||++..|+++|.++|.+++.++++++.++|++|+++|+++|||++
T Consensus 292 a~Srd~~~k~yVq~~l~~~~~~l~~~l~~~~~vYvCG~p~~M~~~V~~~L~~i~~~~~~~~~~~a~~~~~~l~~~~Ry~~ 371 (374)
T 1ddg_A 292 AWSRDQKEKVYVQDKLREQGAELWRWINDGAHIYVCGDANRMAKDVEQALLEVIAEFGGMDTEAADEFLSELRVERRYQR 371 (374)
T ss_dssp EETTSSSSCCCHHHHHHHTHHHHHHHHHTTCEEEEEECTTTHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHTTCEEE
T ss_pred EEecCCCCCccHHHHHHHhHHHHHHHHhCCcEEEEECCCHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCeEE
Confidence 99999988999999999999999999878999999994449999999999999999999999999999999999999999
Q ss_pred eec
Q 014605 418 EAW 420 (421)
Q Consensus 418 dvW 420 (421)
|||
T Consensus 372 dv~ 374 (374)
T 1ddg_A 372 DVY 374 (374)
T ss_dssp EEC
T ss_pred ecC
Confidence 999
No 8
>1tll_A Nitric-oxide synthase, brain; reductase module, FMN, FAD, NADP+, oxidoreductase; HET: FMN FAD NAP; 2.30A {Rattus norvegicus} SCOP: b.43.4.1 c.23.5.2 c.25.1.4
Probab=100.00 E-value=2.1e-73 Score=612.84 Aligned_cols=387 Identities=30% Similarity=0.559 Sum_probs=342.1
Q ss_pred ccee-eEEEeeeecCCCCCCcEEEEEEEecCC-CcccCCCCEEEEccCCCHHHHHHHHHHcCC--CCCceEEEeeCCcc-
Q 014605 22 VCFL-KMIKNQPLTKSGSGKDVHHFEFEFVSA-AIEYEVGDVLEILPSQDPAAVDTFIQRCNL--DPDALITVQHKEMK- 96 (421)
Q Consensus 22 ~~~~-~v~~~~~lt~~~~~~~v~~i~l~~~~~-~~~y~~GD~l~v~p~N~~~~V~~~l~~l~l--~~~~~v~~~~~~~~- 96 (421)
..|. +|++|++||+++++++++||+|+++++ +++|+|||+|+|+|.|+++.|+++|++||+ ++++.|++......
T Consensus 250 ~~~~a~v~~~~~Lt~~~~~~~~~hiel~~~~~~~~~Y~~GD~l~V~P~N~~~~V~~~l~~l~~~~~~d~~v~~~~~~~~~ 329 (688)
T 1tll_A 250 RVSAARLLSRQNLQSPKSSRSTIFVRLHTNGNQELQYQPGDHLGVFPGNHEDLVNALIERLEDAPPANHVVKVEMLEERN 329 (688)
T ss_dssp CCEEEEEEEEEECSCTTCSSCEEEEEEECTTCGGGCCCTTCEEEECCCCCHHHHHHHHTTCSSCCCSCSCEEEEEEEECC
T ss_pred CceEEEEEeeeecCCCCCCceEEEEEEecCCCCCCccCCCCEEEEecCCCHHHHHHHHHHhCCCCCCCeEEEEecccccc
Confidence 3455 999999999999999999999999754 799999999999999999999999999986 57788888642110
Q ss_pred ---CCCCCc-cCCCCCccccHHHHHHhcccccCCCCcHHHHHHHHHhcCChhHHHHHHhhcCCCChHHHHHHHHhcCCCH
Q 014605 97 ---NYLPDI-HKNTTEVPIKLRTFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASPEGRDDLYKYNQKERRTV 172 (421)
Q Consensus 97 ---~~~~~~-~~~~~~~~~tl~~~l~~~~Dl~~~~p~~~~l~~la~~~~~~~~k~~L~~l~~~~~~~~~~~~~~~~~~tl 172 (421)
...+.+ ...++| ++||+++|++|+||++ +|+++||+.||.||+|+.+|++|++|++ +.+.|.+|+...++++
T Consensus 330 ~p~~~~~~~~~~~~~p-~~tl~~~l~~~lDi~~-~p~~~~l~~la~~a~~~~ek~~L~~l~~--~~~~~~~~~~~~~~~i 405 (688)
T 1tll_A 330 TALGVISNWKDESRLP-PCTIFQAFKYYLDITT-PPTPLQLQQFASLATNEKEKQRLLVLSK--GLQEYEEWKWGKNPTM 405 (688)
T ss_dssp CSSSCCEEEEECCSSC-SBCHHHHHHHTBCCSS-CCCHHHHHHHHTTBCCHHHHHHHHHHTT--CSHHHHHHHHHHCCCH
T ss_pred CCCcccccccccCCCC-CccHHHHHHhheeCCC-CCCHHHHHHHHHHcCCHHHHHHHHHHhc--CHHHHHHHHhhcCCCH
Confidence 001000 023456 9999999999999999 9999999999999999999999999997 7899999999999999
Q ss_pred HHHhhhCCCCCCCHHHHHHhcCCCCCCceeeccCCCCCCCeEEEEEEEEEecCCCC--CccCCccchhhhccCCCCCceE
Q 014605 173 LEVLEDFPSVQMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYK--RKRTGLCSVWLAGLDPQQGIYI 250 (421)
Q Consensus 173 ~d~l~~f~s~~~p~~~ll~~lp~~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~~--~~~~G~~S~~L~~l~~~~G~~v 250 (421)
+|+|.+||++++|+++++..+|++++|+|||||+|..+++.++|+|+++.|.++.+ +.+.|.||+||+++++ |+.|
T Consensus 406 ~evl~~fps~~~p~~~l~~~lp~l~~R~YSIsSsp~~~~~~i~l~V~vv~~~~~~g~~~~~~G~~S~~L~~l~~--Gd~v 483 (688)
T 1tll_A 406 VEVLEEFPSIQMPATLLLTQLSLLQPRYYSISSSPDMYPDEVHLTVAIVSYHTRDGEGPVHHGVCSSWLNRIQA--DDVV 483 (688)
T ss_dssp HHHHHHSTTBCCCHHHHHHHSCBCCCEEEEBCSCTTTSTTEEEEEEECCEEETGGGTSCEEECHHHHHHTTCCT--TSEE
T ss_pred HHHHHhCCCcCCCHHHHHHhCcccceeEEeecCCcccCCCeEEEEEEEEEEecCCCCCCcCCCchhHHHHhCCC--CCEE
Confidence 99999999999999999999999999999999999776799999999999976543 5678999999999999 9999
Q ss_pred EEEee-cCCCCCC-CCCCCeEEEeCCCcchhHHHHHHHHHHhcC--CCCCCCEEEEEcccCCC-ccccHHHHHHhhhcCC
Q 014605 251 PAWFQ-KGSLPRP-PPSVPLILIGPGTGCAPFRGFVEERAIQSS--SGPAAPIIFFFGCRNED-DFLYRELWLSHSLNDG 325 (421)
Q Consensus 251 ~i~~~-~g~F~lp-~~~~piimIa~GTGIAPf~s~l~~~~~~~~--~~~~~~~~L~~G~R~~~-d~ly~del~~~~~~~g 325 (421)
.+.++ .|.|.+| ++.+|+||||+|||||||++|++++..... .+..++++||||||+++ |++|++||++|.+. +
T Consensus 484 ~v~~~p~g~F~lp~~~~~piIlIagGtGIAP~~s~l~~~~~~~~~~~~~~~~v~L~~G~R~~~~D~ly~dEL~~~~~~-~ 562 (688)
T 1tll_A 484 PCFVRGAPSFHLPRNPQVPCILVGPGTGIAPFRSFWQQRQFDIQHKGMNPCPMVLVFGCRQSKIDHIYREETLQAKNK-G 562 (688)
T ss_dssp EEEEECCGGGSCCSCTTSCEEEEEEGGGGTTHHHHHHHHHHHHHHSCCCCCCEEEEEEESCTTTTCTTHHHHHHHHHT-T
T ss_pred EEEeccCCCcccCcCCCCCEEEEEcCcchHHHHHHHHHHHHhhhhccCCCCCEEEEEEeccchhhhhHHHHHHHHHHc-C
Confidence 99995 5599999 678999999999999999999999987520 01238999999999998 99999999999887 5
Q ss_pred CccccCCCcEEEEeccCCCC-cccchhhHHHc-HHHHHHHh-cCCCEEEEeCCCCccHHHHHHHHHHHHHHhCCCCHHHH
Q 014605 326 VFSEAKGGGFYVAFSRKQPQ-KVYVQHKMLEQ-SQRIWNLL-LSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSA 402 (421)
Q Consensus 326 ~l~~~~~~~~~~a~Sr~~~~-k~yVqd~l~~~-~~~v~~~l-~~~~~iyVCG~~~~m~~~V~~~L~~i~~~~~~~~~~~a 402 (421)
.+. +++++|||++.. ++|||++|.++ .+.+++++ ..++.||||||+ .|+++|.++|.+++.++++++.++|
T Consensus 563 ~~~-----~l~~a~Sr~~~~~k~yVq~~l~~~l~~~l~~~l~~~~~~vYvCGp~-~M~~~V~~~L~~i~~~~gg~~~~~a 636 (688)
T 1tll_A 563 VFR-----ELYTAYSREPDRPKKYVQDVLQEQLAESVYRALKEQGGHIYVCGDV-TMAADVLKAIQRIMTQQGKLSEEDA 636 (688)
T ss_dssp SEE-----EEEEEESSCTTSCCCCHHHHHHHSSHHHHHHHHHTSCCEEEEEEEH-HHHHHHHHHHHHHHHTTTCCCTTHH
T ss_pred Cce-----EEEEEECCCCCCCccchhhhhHHhHHHHHHHhhccCCcEEEEeCCH-HHHHHHHHHHHHHHHHcCCCCHHHH
Confidence 443 899999999764 89999999988 78888877 458999999998 8999999999999999999999999
Q ss_pred HHHHHHHHHCCCEEEeecC
Q 014605 403 ANWLKALQRAGRYHVEAWS 421 (421)
Q Consensus 403 ~~~l~~l~~~~Ry~~dvWs 421 (421)
++|+++|+.++||+.|+|+
T Consensus 637 ~~~l~~l~~~~ry~~Evf~ 655 (688)
T 1tll_A 637 GVFISRLRDDNRYHEDIFG 655 (688)
T ss_dssp HHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHhhhhcCCEEEEecC
Confidence 9999999999999999995
No 9
>1fnb_A Ferredoxin-NADP+ reductase; oxidoreductase (NADP+(A),ferredoxin(A)); HET: FAD; 1.70A {Spinacia oleracea} SCOP: b.43.4.2 c.25.1.1 PDB: 1fnc_A* 1fnd_A* 1bx1_A* 1frq_A* 1frn_A* 1bx0_A* 1qg0_A* 1qga_A* 1qfz_A* 1qfy_A* 1gaw_A* 1gaq_A* 3mhp_A* 1sm4_A* 2xnc_A*
Probab=100.00 E-value=1.3e-39 Score=319.92 Aligned_cols=263 Identities=25% Similarity=0.459 Sum_probs=220.9
Q ss_pred ee-eEEEeeeecCCCCCCcEEEEEEEecCCCcccCCCCEEEEccCCCHHHHHHHHHHcCCCCCceEEEeeCCccCCCCCc
Q 014605 24 FL-KMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQDPAAVDTFIQRCNLDPDALITVQHKEMKNYLPDI 102 (421)
Q Consensus 24 ~~-~v~~~~~lt~~~~~~~v~~i~l~~~~~~~~y~~GD~l~v~p~N~~~~V~~~l~~l~l~~~~~v~~~~~~~~~~~~~~ 102 (421)
+. +|++++.+|+.++.+++++|+|+.++ ...|+||+++.|.++|..
T Consensus 38 ~~~~V~~~~~lt~~~~~~~v~~l~l~~~~-~~~~~pGQ~v~l~~~~~~-------------------------------- 84 (314)
T 1fnb_A 38 YVGRCLLNTKITGDDAPGETWHMVFSHEG-EIPYREGQSVGVIPDGED-------------------------------- 84 (314)
T ss_dssp EEEEEEEEEECSCSSSSSCEEEEEEECTT-CCCCCTTCEEEEECSSBC--------------------------------
T ss_pred EEEEEEEEEEecCCCCCCcEEEEEEecCC-CCCcCCCCEEEEecCCCC--------------------------------
Confidence 44 99999999998888999999999874 488999999999876521
Q ss_pred cCCCCCccccHHHHHHhcccccCCCCcHHHHHHHHHhcCChhHHHHHHhhcCCCChHHHHHHHHhcCCCHHHHhhhCCCC
Q 014605 103 HKNTTEVPIKLRTFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASPEGRDDLYKYNQKERRTVLEVLEDFPSV 182 (421)
Q Consensus 103 ~~~~~~~~~tl~~~l~~~~Dl~~~~p~~~~l~~la~~~~~~~~k~~L~~l~~~~~~~~~~~~~~~~~~tl~d~l~~f~s~ 182 (421)
..+
T Consensus 85 --------------------~~g--------------------------------------------------------- 87 (314)
T 1fnb_A 85 --------------------KNG--------------------------------------------------------- 87 (314)
T ss_dssp --------------------TTS---------------------------------------------------------
T ss_pred --------------------cCC---------------------------------------------------------
Confidence 000
Q ss_pred CCCHHHHHHhcCCCCCCceeeccCCCC---CCCeEEEEEEEEEecCCCCCccCCccchhhhccCCCCCceEEEEeecCCC
Q 014605 183 QMPIDWLVQLVPPLKTRAFSISSSPLA---HPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIPAWFQKGSL 259 (421)
Q Consensus 183 ~~p~~~ll~~lp~~~pR~YSIaSsp~~---~~~~i~l~V~~v~~~~~~~~~~~G~~S~~L~~l~~~~G~~v~i~~~~g~F 259 (421)
.+..+|+|||+|+|.. .++.++|+|+.+.|.+..+..+.|.||+||+++++ |+.|.+.+|.|.|
T Consensus 88 -----------~~~~~R~ySi~s~p~~~~~~~~~~~l~Vk~~~y~~~~g~~~~G~~S~~L~~l~~--Gd~v~v~gP~G~~ 154 (314)
T 1fnb_A 88 -----------KPHKLRLYSIASSALGDFGDAKSVSLCVKRLIYTNDAGETIKGVCSNFLCDLKP--GAEVKLTGPVGKE 154 (314)
T ss_dssp -----------SBCCCEEEECCSCSSCTTSSSCEEEEEEECCEEECTTSCEEECHHHHHHHHCCT--TCEEEEEEEECST
T ss_pred -----------CcCCceeEecCCCCcccCCCCCEEEEEEEEEEeccCCCCcCCCchhhHhhcCCC--CCEEEEEeccCCc
Confidence 0247899999999853 35899999998888776666678999999999999 9999999999986
Q ss_pred C-CC-CCCCCeEEEeCCCcchhHHHHHHHHHHhcCCC--CCCCEEEEEcccCCCccccHHHHHHhhhcCC-CccccCCCc
Q 014605 260 P-RP-PPSVPLILIGPGTGCAPFRGFVEERAIQSSSG--PAAPIIFFFGCRNEDDFLYRELWLSHSLNDG-VFSEAKGGG 334 (421)
Q Consensus 260 ~-lp-~~~~piimIa~GTGIAPf~s~l~~~~~~~~~~--~~~~~~L~~G~R~~~d~ly~del~~~~~~~g-~l~~~~~~~ 334 (421)
. +| +...|+||||+|||||||++|++++......+ ..++++||||||+.+|++|.+||+++.+.++ ++ +
T Consensus 155 ~~~~~~~~~~~vlIagGtGIaP~~s~l~~~~~~~~~~~~~~~~v~L~~g~R~~~d~~~~~el~~l~~~~~~~~------~ 228 (314)
T 1fnb_A 155 MLMPKDPNATIIMLGTGTGIAPFRSFLWKMFFEKHDDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPDNF------R 228 (314)
T ss_dssp TCCBSCTTCEEEEEEEGGGGHHHHHHHHHHHTCCBTTBCCCSEEEEEEEESSGGGCCSHHHHHHHHHHCTTTE------E
T ss_pred eeCCCCCCCCEEEEeCCccHHHHHHHHHHHHHhccccccCCCCEEEEEecCCHHHhhhHHHHHHHHHhCCCcE------E
Confidence 4 56 45789999999999999999999987653211 1268999999999999999999999987644 68 8
Q ss_pred EEEEeccCCC----CcccchhhHHHcHHHHHHHhc-CCCEEEEeCCCCccHHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 014605 335 FYVAFSRKQP----QKVYVQHKMLEQSQRIWNLLL-SKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKAL 409 (421)
Q Consensus 335 ~~~a~Sr~~~----~k~yVqd~l~~~~~~v~~~l~-~~~~iyVCG~~~~m~~~V~~~L~~i~~~~~~~~~~~a~~~l~~l 409 (421)
+++++||+++ .++||++.|.+..+.+++.+. .++.||+|||+ .|+++|+++|.+++.+.+ . +|++++++|
T Consensus 229 ~~~~~s~~~~~~~g~~~~v~~~l~~~~~~~~~~~~~~~~~vyvCGp~-~m~~~v~~~L~~~~~~~g-~---~~~~~~~~l 303 (314)
T 1fnb_A 229 LDFAVSREQTNEKGEKMYIQTRMAQYAVELWEMLKKDNTYVYMCGLK-GMEKGIDDIMVSLAAAEG-I---DWIEYKRQL 303 (314)
T ss_dssp EEEEETTTCBCTTCCBCCHHHHHHTTHHHHHHHTTSTTEEEEEEECT-THHHHHHHHHHHHHHTTT-C---CHHHHHHHH
T ss_pred EEEEECCCCcccCCCceechHHHHHhHHHHHHHHhcCCeEEEEECCH-HHHHHHHHHHHHHHHHhC-c---hHHHHHHHH
Confidence 9999999754 478999999988777777664 58899999998 999999999999987765 3 478899999
Q ss_pred HHCCCEEEeec
Q 014605 410 QRAGRYHVEAW 420 (421)
Q Consensus 410 ~~~~Ry~~dvW 420 (421)
+++|||++|+|
T Consensus 304 ~~~~r~~~d~~ 314 (314)
T 1fnb_A 304 KKAEQWNVEVY 314 (314)
T ss_dssp HHTTCEEEEEC
T ss_pred HHCCcEEEecC
Confidence 99999999999
No 10
>2bmw_A Ferredoxin--NADP reductase; oxidoreductase, flavoprotein, FAD, FNR, reductase reductase, phycobilisome, thylakoid; HET: FAD; 1.5A {Anabaena SP} SCOP: b.43.4.2 c.25.1.1 PDB: 1h42_A* 2vyq_A* 2vzl_A* 1ogi_A* 1ogj_A* 1gjr_A* 1e62_A* 1e64_A* 1quf_A* 1e63_A* 1go2_A* 1w34_A* 1b2r_A* 1w35_A* 1w87_A* 1que_A* 1ewy_A* 1gr1_A* 2bsa_A* 1bqe_A* ...
Probab=100.00 E-value=1.9e-39 Score=317.21 Aligned_cols=264 Identities=26% Similarity=0.488 Sum_probs=219.4
Q ss_pred ee-eEEEeeeecCCCCCCcEEEEEEEecCCCcccCCCCEEEEccCCCHHHHHHHHHHcCCCCCceEEEeeCCccCCCCCc
Q 014605 24 FL-KMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQDPAAVDTFIQRCNLDPDALITVQHKEMKNYLPDI 102 (421)
Q Consensus 24 ~~-~v~~~~~lt~~~~~~~v~~i~l~~~~~~~~y~~GD~l~v~p~N~~~~V~~~l~~l~l~~~~~v~~~~~~~~~~~~~~ 102 (421)
|. +|+++++|++.++++++++++|++++..+.|+||+++.|.++|..
T Consensus 22 ~~~~V~~~~~l~~~~~~~~v~~l~~~~~~~~~~~~pGQ~v~l~~~~~~-------------------------------- 69 (304)
T 2bmw_A 22 FIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIPPGVD-------------------------------- 69 (304)
T ss_dssp EEEEEEEEEECSCTTCSSCEEEEEEECTTSCCCCCTTCEEEEECSSBC--------------------------------
T ss_pred EEEEEEEEEEecCCCCCCcEEEEEEecCCCccccCCCCEEEEEcCCCc--------------------------------
Confidence 55 999999999988999999999999855689999999999887631
Q ss_pred cCCCCCccccHHHHHHhcccccCCCCcHHHHHHHHHhcCChhHHHHHHhhcCCCChHHHHHHHHhcCCCHHHHhhhCCCC
Q 014605 103 HKNTTEVPIKLRTFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASPEGRDDLYKYNQKERRTVLEVLEDFPSV 182 (421)
Q Consensus 103 ~~~~~~~~~tl~~~l~~~~Dl~~~~p~~~~l~~la~~~~~~~~k~~L~~l~~~~~~~~~~~~~~~~~~tl~d~l~~f~s~ 182 (421)
. .+ .
T Consensus 70 -----~---------------~g-~------------------------------------------------------- 73 (304)
T 2bmw_A 70 -----K---------------NG-K------------------------------------------------------- 73 (304)
T ss_dssp -----T---------------TS-C-------------------------------------------------------
T ss_pred -----c---------------cC-C-------------------------------------------------------
Confidence 0 00 0
Q ss_pred CCCHHHHHHhcCCCCCCceeeccCCCC---CCCeEEEEEEEEEecCCC-CCccCCccchhhhccCCCCCceEEEEeecCC
Q 014605 183 QMPIDWLVQLVPPLKTRAFSISSSPLA---HPNQVHLTVSVVSWTTPY-KRKRTGLCSVWLAGLDPQQGIYIPAWFQKGS 258 (421)
Q Consensus 183 ~~p~~~ll~~lp~~~pR~YSIaSsp~~---~~~~i~l~V~~v~~~~~~-~~~~~G~~S~~L~~l~~~~G~~v~i~~~~g~ 258 (421)
+..+|+|||+|+|.. .++.++|+|+++.|.++. +..+.|.||+||+++++ |+.|.+.+|.|.
T Consensus 74 ------------~~~~R~ySias~~~~~~~~~~~l~l~Vk~~~y~~~~~~~~~~G~~S~~L~~l~~--Gd~v~v~gP~G~ 139 (304)
T 2bmw_A 74 ------------PEKLRLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEP--GSEVKITGPVGK 139 (304)
T ss_dssp ------------BCCCEEEEBCSCTTTTTTSSSEEEEEEECCEECSSSSSSCEECHHHHHHHTCCT--TCEEEEEEEECS
T ss_pred ------------CCCCcceecCCCCcccCCCCCEEEEEEEEEEeeccccCcCCCcchhhHHhcCCC--CCEEEEEeccCC
Confidence 136899999999853 368999999988776542 33467999999999999 999999999997
Q ss_pred C-CCC-CCCCCeEEEeCCCcchhHHHHHHHHHHhcC----CC--CCCCEEEEEcccCCCccccHHHHHHhhhcCC-Cccc
Q 014605 259 L-PRP-PPSVPLILIGPGTGCAPFRGFVEERAIQSS----SG--PAAPIIFFFGCRNEDDFLYRELWLSHSLNDG-VFSE 329 (421)
Q Consensus 259 F-~lp-~~~~piimIa~GTGIAPf~s~l~~~~~~~~----~~--~~~~~~L~~G~R~~~d~ly~del~~~~~~~g-~l~~ 329 (421)
| .+| +...|+||||+|||||||++|++++..... .+ ..++++||||||+.+|++|.+||+++.+.++ ++
T Consensus 140 ~~~~~~~~~~~~vlIagGtGIaP~~s~l~~~~~~~~~~~~~~~~~~~~v~l~~g~r~~~d~~~~~el~~~~~~~~~~~-- 217 (304)
T 2bmw_A 140 EMLLPDDPEANVIMLAGGTGITPMRTYLWRMFKDAERAANPEYQFKGFSWLVFGVPTTPNILYKEELEEIQQKYPDNF-- 217 (304)
T ss_dssp SSCCCSCTTCEEEEEEEGGGHHHHHHHHHHHHCHHHHHHCTTCCCCSCEEEEEEESSGGGCTTHHHHHHHHHHCTTTE--
T ss_pred ceeCCCCCCCCEEEEecCccHHHHHHHHHHHHHhhhhhcccccccCCCEEEEEEeCChHhcchHHHHHHHHHhCCCcE--
Confidence 5 466 567899999999999999999998765430 00 1268999999999889999999999987654 67
Q ss_pred cCCCcEEEEeccCCC----CcccchhhHHHcHHHHHHHhcC-CCEEEEeCCCCccHHHHHHHHHHHHHHhCCCCHHHHHH
Q 014605 330 AKGGGFYVAFSRKQP----QKVYVQHKMLEQSQRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAAN 404 (421)
Q Consensus 330 ~~~~~~~~a~Sr~~~----~k~yVqd~l~~~~~~v~~~l~~-~~~iyVCG~~~~m~~~V~~~L~~i~~~~~~~~~~~a~~ 404 (421)
++++++||+++ .+.|||+.+.+..+.+++++.. ++.||||||+ .|+++|+++|.+++.+.+ .+ ++.
T Consensus 218 ----~~~~~~s~~~~~~~~~~~~v~~~l~~~~~~l~~~~~~~~~~vyvCGp~-~m~~~v~~~l~~~~~~~g-~~---~~~ 288 (304)
T 2bmw_A 218 ----RLTYAISREQKNPQGGRMYIQDRVAEHADQLWQLIKNQKTHTYICGPP-PMEEGIDAALSAAAAKEG-VT---WSD 288 (304)
T ss_dssp ----EEEEEETTTCBCTTSSBCCHHHHHHHTHHHHHHHHTSTTEEEEEEECT-THHHHHHHHHHHHHHTTT-CC---HHH
T ss_pred ----EEEEEEcCCCCCCCCCcceehHHHHHhHHHHHHHhhcCCcEEEEECCH-HHHHHHHHHHHHHHHHcC-cc---HHH
Confidence 89999999753 4789999999888888877654 7889999998 999999999999987654 44 577
Q ss_pred HHHHHHHCCCEEEeec
Q 014605 405 WLKALQRAGRYHVEAW 420 (421)
Q Consensus 405 ~l~~l~~~~Ry~~dvW 420 (421)
++++|+++|||++|+|
T Consensus 289 ~~~~m~~~~ry~~e~~ 304 (304)
T 2bmw_A 289 YQKDLKKAGRWHVETY 304 (304)
T ss_dssp HHHHHHHTTCEEEEEC
T ss_pred HHHHHHHcCCeEEecC
Confidence 9999999999999999
No 11
>2b5o_A FNR, ferredoxin--NADP reductase; complex with FAD, oxidoreductase; HET: FAD; 2.50A {Synechococcus SP}
Probab=100.00 E-value=5e-38 Score=318.92 Aligned_cols=264 Identities=25% Similarity=0.432 Sum_probs=221.1
Q ss_pred ee-eEEEeeeecCCCCCCcEEEEEEEecCCCcccCCCCEEEEccCCCHHHHHHHHHHcCCCCCceEEEeeCCccCCCCCc
Q 014605 24 FL-KMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQDPAAVDTFIQRCNLDPDALITVQHKEMKNYLPDI 102 (421)
Q Consensus 24 ~~-~v~~~~~lt~~~~~~~v~~i~l~~~~~~~~y~~GD~l~v~p~N~~~~V~~~l~~l~l~~~~~v~~~~~~~~~~~~~~ 102 (421)
|. +|++++++++.++.+++++|+|+.++....|+||+++.|.+++..
T Consensus 123 ~~~~V~~~~~lt~~~~~~~v~~l~l~~~~~~~~~~pGQ~v~l~~~~~~-------------------------------- 170 (402)
T 2b5o_A 123 FLGKCIENYELVDEGGSGTVRHVTFDISEGDLRYLEGQSIGIIPPGED-------------------------------- 170 (402)
T ss_dssp EEEEEEEEEECSCTTCCSCEEEEEEECTTSCCCCCTTCEEEEECSSEE--------------------------------
T ss_pred EEEEEEEEEEcCCCCCCCcEEEEEEECCCCCCCcCCCCEEEEEecCCC--------------------------------
Confidence 55 999999999988888999999998754589999999999876521
Q ss_pred cCCCCCccccHHHHHHhcccccCCCCcHHHHHHHHHhcCChhHHHHHHhhcCCCChHHHHHHHHhcCCCHHHHhhhCCCC
Q 014605 103 HKNTTEVPIKLRTFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASPEGRDDLYKYNQKERRTVLEVLEDFPSV 182 (421)
Q Consensus 103 ~~~~~~~~~tl~~~l~~~~Dl~~~~p~~~~l~~la~~~~~~~~k~~L~~l~~~~~~~~~~~~~~~~~~tl~d~l~~f~s~ 182 (421)
..+
T Consensus 171 --------------------~~g--------------------------------------------------------- 173 (402)
T 2b5o_A 171 --------------------KNG--------------------------------------------------------- 173 (402)
T ss_dssp --------------------TTT---------------------------------------------------------
T ss_pred --------------------cCC---------------------------------------------------------
Confidence 000
Q ss_pred CCCHHHHHHhcCCCCCCceeeccCCCC---CCCeEEEEEEEEEecCCC-CCccCCccchhhhccCCCCC-ceEEEEeecC
Q 014605 183 QMPIDWLVQLVPPLKTRAFSISSSPLA---HPNQVHLTVSVVSWTTPY-KRKRTGLCSVWLAGLDPQQG-IYIPAWFQKG 257 (421)
Q Consensus 183 ~~p~~~ll~~lp~~~pR~YSIaSsp~~---~~~~i~l~V~~v~~~~~~-~~~~~G~~S~~L~~l~~~~G-~~v~i~~~~g 257 (421)
.+..+|+|||+|+|.. +++.++|+|+++.|.++. ++.+.|.||+||+++++ | +.|.+.+|.|
T Consensus 174 -----------~~~~~R~ySIas~p~~~~~~~~~l~l~Vk~~~y~~~~~~~~~~G~~S~~L~~l~~--G~d~v~v~gP~G 240 (402)
T 2b5o_A 174 -----------KPHKLRLYSIASTRHGDMEDNKTVSLCVRQLEYQDPESGETVYGVCSTYLCNLPV--GTDDVKITGPVG 240 (402)
T ss_dssp -----------EECCCEEEEBCSCTTTTTTSSCEEEEEEECCEEECTTTCCEEECHHHHHHHTCCT--TCCCEEEEEEEC
T ss_pred -----------CccCceeeeccCCCccccCCCCEEEEEEEEeeecccccCcCCCCchhHHHhhCCC--CCceEEEEcccC
Confidence 0136899999999863 258999999988776532 33468999999999999 9 9999999999
Q ss_pred CC-CCC-CCCCCeEEEeCCCcchhHHHHHHHHHHhcCCC--CCCCEEEEEcccCCCccccHHHHHHhhhcCC-CccccCC
Q 014605 258 SL-PRP-PPSVPLILIGPGTGCAPFRGFVEERAIQSSSG--PAAPIIFFFGCRNEDDFLYRELWLSHSLNDG-VFSEAKG 332 (421)
Q Consensus 258 ~F-~lp-~~~~piimIa~GTGIAPf~s~l~~~~~~~~~~--~~~~~~L~~G~R~~~d~ly~del~~~~~~~g-~l~~~~~ 332 (421)
.| .+| +...|+||||+|||||||++|++++......+ ..++++||||||+.+|++|++||+++.+.++ ++
T Consensus 241 ~~~~l~~~~~~~vvlIAgGtGIaP~~s~l~~l~~~~~~~~~~~~~v~L~~g~R~~~d~~~~~eL~~l~~~~~~~~----- 315 (402)
T 2b5o_A 241 KEMLLPDDEDATVVMLATGTGIAPFRAFLWRMFKEQHEDYKFKGKAWLIFGVPYTANILYKDDFEKMAAENPDNF----- 315 (402)
T ss_dssp STTCCCSCTTCEEEEEEEGGGGHHHHHHHHHHHTCCCSSCCCCSEEEEEEEESSGGGCTTHHHHHHHHHHCTTTE-----
T ss_pred CcccCCccCCCCEEEEEcccCHHHHHHHHHHHHHhccccccccCCEEEEEecCCHHHhHHHHHHHHHHHhCCCcE-----
Confidence 86 566 56789999999999999999999987654211 1268999999999999999999999988655 68
Q ss_pred CcEEEEeccCCC----CcccchhhHHHcHHHHHHHhc-CCCEEEEeCCCCccHHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 014605 333 GGFYVAFSRKQP----QKVYVQHKMLEQSQRIWNLLL-SKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLK 407 (421)
Q Consensus 333 ~~~~~a~Sr~~~----~k~yVqd~l~~~~~~v~~~l~-~~~~iyVCG~~~~m~~~V~~~L~~i~~~~~~~~~~~a~~~l~ 407 (421)
++++++||+++ .++|||+.|.+..+.+++++. .++.||+|||+ .|+++|.++|.+++.+.+. .++++++
T Consensus 316 -~v~~~~S~~~~~~~g~~~~v~~~l~~~~~~l~~~l~~~~~~vyvCGP~-~M~~~v~~~L~~~g~~~g~----~~~~~~~ 389 (402)
T 2b5o_A 316 -RLTYAISREQKTADGGKVYVQSRVSEYADELFEMIQKPNTHVYMCGLK-GMQPPIDETFTAEAEKRGL----NWEEMRR 389 (402)
T ss_dssp -EEEEEETTTCBCTTSCBCCHHHHHHHTHHHHHHHHTSTTEEEEEEECG-GGHHHHHHHHHHHHHHTTC----CHHHHHH
T ss_pred -EEEEEECCCCcccCCCccchHHHHHHhHHHHHHHhccCCcEEEEECCH-HHHHHHHHHHHHHHHHcCc----hHHHHHH
Confidence 89999999753 478999999998888888775 47899999998 9999999999999987753 4678999
Q ss_pred HHHHCCCEEEeec
Q 014605 408 ALQRAGRYHVEAW 420 (421)
Q Consensus 408 ~l~~~~Ry~~dvW 420 (421)
+|+++|||++|+|
T Consensus 390 ~m~~~~Ry~~e~~ 402 (402)
T 2b5o_A 390 SMKKEHRWHVEVY 402 (402)
T ss_dssp HHHHTTCEEEEEC
T ss_pred HHHHCCCEEEecC
Confidence 9999999999999
No 12
>3vo2_A Putative uncharacterized protein; rossmann fold, oxidoreductase, FAD binding; HET: FAD; 1.39A {Zea mays} PDB: 3vo1_A* 1gaw_A* 1gaq_A* 1qg0_A* 4af6_A* 1qga_A* 1qfz_A* 1qfy_A* 4af7_A* 1sm4_A* 3mhp_A* 1fnb_A* 1fnc_A* 1fnd_A* 1bx1_A* 1frq_A* 1frn_A* 1bx0_A* 2xnc_A*
Probab=100.00 E-value=1.3e-38 Score=312.55 Aligned_cols=224 Identities=26% Similarity=0.419 Sum_probs=193.7
Q ss_pred CCHHHHHHhcCCC-------CCCceeeccCCCC---CCCeEEEEEEEEEecCCCCCccCCccchhhhccCCCCCceEEEE
Q 014605 184 MPIDWLVQLVPPL-------KTRAFSISSSPLA---HPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIPAW 253 (421)
Q Consensus 184 ~p~~~ll~~lp~~-------~pR~YSIaSsp~~---~~~~i~l~V~~v~~~~~~~~~~~G~~S~~L~~l~~~~G~~v~i~ 253 (421)
.|||++...+|.. .+|+|||+|+|.. +++.++|+|+++.|.++.++.+.|.||+||+++++ |+.|.+.
T Consensus 67 ~pGQ~v~l~~~~~~~~g~~~~~R~ySias~p~~~~~~~~~~~l~Vk~~~~~~~~~~~~~G~~S~~L~~l~~--Gd~v~v~ 144 (310)
T 3vo2_A 67 REGQSIGIIADGEDKNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNDQGEIVKGVCSNFLCDLKP--GADVKIT 144 (310)
T ss_dssp CTTCEEEEECSSBCTTSCBCCCEEEECCSCTTTTTTSSSEEEEEEECCEEECTTSCEEECHHHHHHHTCCT--TCEEEEE
T ss_pred cCCCEEEEECCCcCCCCCcCcceeeecCCCCcccCCCCCEEEEEEEEEEeccCCCCcCCcchhhHHhcCCC--CCEEEEE
Confidence 5888877777642 5899999999863 36899999999988877777788999999999999 9999999
Q ss_pred eecCCCC-CC-CCCCCeEEEeCCCcchhHHHHHHHHHHhcCCC--CCCCEEEEEcccCCCccccHHHHHHhhhcCC-Ccc
Q 014605 254 FQKGSLP-RP-PPSVPLILIGPGTGCAPFRGFVEERAIQSSSG--PAAPIIFFFGCRNEDDFLYRELWLSHSLNDG-VFS 328 (421)
Q Consensus 254 ~~~g~F~-lp-~~~~piimIa~GTGIAPf~s~l~~~~~~~~~~--~~~~~~L~~G~R~~~d~ly~del~~~~~~~g-~l~ 328 (421)
+|.|.|. +| +...|+||||+|||||||++|++++..+.... ..++++||||||+.+|++|.+||+++.+.++ ++
T Consensus 145 gP~G~~~~~~~~~~~~~vlIagGtGIaP~~s~l~~~~~~~~~~~~~~~~v~L~~g~r~~~d~~~~~el~~l~~~~~~~~- 223 (310)
T 3vo2_A 145 GPVGKEMLMPKDPNATVIMLATGTGIAPFRSFLWKMFLEEHEDYKFSGLAWLFLGVPTSDSLLYKEELEKMKEMAPDNF- 223 (310)
T ss_dssp EEECSTTCCBSCTTCEEEEEEEGGGGHHHHHHHHHHHSSCCTTCCCCSEEEEEEEESSGGGCCSHHHHHHHHHHCTTTE-
T ss_pred eccCCcccCCCCCCCCEEEEeCCcchhHHHHHHHHHHHhhcccccCCCcEEEEEEecChhhcccHHHHHHHHHhCCCCE-
Confidence 9999765 56 56789999999999999999999987654221 1268999999999999999999999988754 78
Q ss_pred ccCCCcEEEEeccCCC----CcccchhhHHHcHHHHHHHhc-CCCEEEEeCCCCccHHHHHHHHHHHHHHhCCCCHHHHH
Q 014605 329 EAKGGGFYVAFSRKQP----QKVYVQHKMLEQSQRIWNLLL-SKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAA 403 (421)
Q Consensus 329 ~~~~~~~~~a~Sr~~~----~k~yVqd~l~~~~~~v~~~l~-~~~~iyVCG~~~~m~~~V~~~L~~i~~~~~~~~~~~a~ 403 (421)
++++++||++. .++|||+.+.+..+.+++++. .++.||+|||+ .|+++|+++|.+++.+.+ . +++
T Consensus 224 -----~v~~~~sr~~~~~~g~~~~v~~~l~~~~~~l~~~l~~~~~~vyvCGp~-~M~~~v~~~L~~~~~~~g-~---~~~ 293 (310)
T 3vo2_A 224 -----RLDFAVSREQTNAAGEKMYIQTRMAEYREELWELLKKDNTYVYMCGLK-GMEKGIDDIMLNLAAKDG-I---DWM 293 (310)
T ss_dssp -----EEEEEETTTCBCTTCCBCCHHHHHHTTHHHHHHHHTSTTEEEEEEEST-THHHHHHHHHHHHHHHTT-C---CHH
T ss_pred -----EEEEEECCCCCCCCCcceehHHHHHHHHHHHHHhcccCCcEEEEeCCH-HHHHHHHHHHHHHHHHcC-c---CHH
Confidence 89999999864 578999999998888888876 48999999998 999999999999998764 3 478
Q ss_pred HHHHHHHHCCCEEEeec
Q 014605 404 NWLKALQRAGRYHVEAW 420 (421)
Q Consensus 404 ~~l~~l~~~~Ry~~dvW 420 (421)
+|+++|+++|||++|+|
T Consensus 294 ~~~~~l~~~~r~~~e~y 310 (310)
T 3vo2_A 294 QYKKQLKKGEQWNVEVY 310 (310)
T ss_dssp HHHHHHHHTTSEEEEEC
T ss_pred HHHHHHHHCCceEEecC
Confidence 89999999999999999
No 13
>2rc5_A Ferredoxin-NADP reductase; FAD, oxidoreductase; HET: FAD; 2.43A {Leptospira interrogans} PDB: 2rc6_A*
Probab=100.00 E-value=6.1e-37 Score=300.83 Aligned_cols=211 Identities=20% Similarity=0.341 Sum_probs=172.9
Q ss_pred CCCCceeeccCCCC---CCCeEEEEEEEEEecCCCCCc-cCCccchhhhccCCCCCceEEEEeecCCCC-CCC--CCCCe
Q 014605 196 LKTRAFSISSSPLA---HPNQVHLTVSVVSWTTPYKRK-RTGLCSVWLAGLDPQQGIYIPAWFQKGSLP-RPP--PSVPL 268 (421)
Q Consensus 196 ~~pR~YSIaSsp~~---~~~~i~l~V~~v~~~~~~~~~-~~G~~S~~L~~l~~~~G~~v~i~~~~g~F~-lp~--~~~pi 268 (421)
+.+|+|||+|+|.. +++.++|+|+++.|.+..+.. +.|.+|+||+++++ |+.|.+.+|.|.|. +|. ..+|+
T Consensus 91 ~~~R~ySi~s~p~~~~~~~~~l~l~vk~~~~~~~~g~~~~~G~~S~~L~~l~~--Gd~v~v~gP~G~~~~~~~~~~~~~~ 168 (314)
T 2rc5_A 91 YTVRLYSIASPSYSFGMKEDNIEFIIKRDNIYDENGNIQFKGVCSNYMCDLKP--GDEVTMTGPSGKKFLLPNTDFSGDI 168 (314)
T ss_dssp CCCEEEECCSCTTCGGGCCCEEEEEEECCBCC--CCSCSSBCHHHHHHHTCCT--TCEEEEEEEECSSSCCCSSCBCSCE
T ss_pred CCceeeeccCCccccCCCCCEEEEEEEEEeecCCCCCcCCCcchHHHHhcCCC--cCEEEEEeccCCceeCCCCCCCCCE
Confidence 67899999999852 368999999887766544433 57999999999999 99999999999865 443 47899
Q ss_pred EEEeCCCcchhHHHHHHHHHHhcCCCCCCCEEEEEcccCCCccccHHHHHHhhhcCCCccccCCCcEEEEeccCCC----
Q 014605 269 ILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQP---- 344 (421)
Q Consensus 269 imIa~GTGIAPf~s~l~~~~~~~~~~~~~~~~L~~G~R~~~d~ly~del~~~~~~~g~l~~~~~~~~~~a~Sr~~~---- 344 (421)
||||+|||||||++|++++.........++++||||||+.+|++|.+||+++.+.++++ ++++++||+++
T Consensus 169 vlIagGtGIaP~~s~l~~l~~~~~~~~~~~v~l~~g~r~~~d~~~~~el~~l~~~~~~~------~~~~~~s~~~~~~~~ 242 (314)
T 2rc5_A 169 MFLATGTGIAPFIGMSEELLEHKLIKFTGNITLVYGAPYSDELVMMDYLKGLESKHKNF------KLITAISREEKNSFD 242 (314)
T ss_dssp EEEEEGGGGHHHHHHHHHHHTTCSSCBCSCEEEEEEESSGGGSCSHHHHHHHHHHHSSE------EEEEEETTTCBCTTT
T ss_pred EEEECCccHHHHHHHHHHHHHhcccCCCCcEEEEEEeCCHHHHhHHHHHHHHHHhCCcE------EEEEEECCCCCcccC
Confidence 99999999999999999987653211126899999999999999999999998754678 99999999743
Q ss_pred -CcccchhhHHHcHHHHHHHhcCCCEEEEe-CCCCccHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCEEEeec
Q 014605 345 -QKVYVQHKMLEQSQRIWNLLLSKASIYVA-GSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYHVEAW 420 (421)
Q Consensus 345 -~k~yVqd~l~~~~~~v~~~l~~~~~iyVC-G~~~~m~~~V~~~L~~i~~~~~~~~~~~a~~~l~~l~~~~Ry~~dvW 420 (421)
.++|||+.+.+..+.+++++.....+||| ||+ .|+++|++.|.++.. .+ ..++.|+.+|+++|||++|+|
T Consensus 243 g~~~~v~~~l~~~~~~l~~~~~~~~~~yvCGGp~-~m~~~v~~~L~~~g~--~~---i~~e~f~~~l~~~gr~~~e~~ 314 (314)
T 2rc5_A 243 GGRMYISHRVREQAEAVKKILNGGGRFYICGGPK-GMEKGVIEEIQKISG--NT---GTYEEFKHHLEGAHQLFVETY 314 (314)
T ss_dssp SSBCCHHHHHHHTHHHHHHHHHHTCEEEEEESST-TTHHHHHHHHHHHHT--CC---SCHHHHHHHHHHTTCEEEEEC
T ss_pred CCceehhHHHHHhHHHHHHHhhcCCeEEEeCCcH-HHHHHHHHHHHHHHh--cc---chHHHHHHHHHHCCCEEEecC
Confidence 47899999998877777766433345999 887 999999999999865 22 346789999999999999999
No 14
>3lo8_A Ferredoxin--NADP reductase; electron transport, oxidoreductase, FAD, flavoprotein; HET: FAD; 1.05A {Zea mays} PDB: 3lvb_A* 1jb9_A*
Probab=100.00 E-value=4.7e-37 Score=301.26 Aligned_cols=225 Identities=28% Similarity=0.424 Sum_probs=187.8
Q ss_pred CCCHHHHHHhcCCC---------CCCceeeccCCCC---CCCeEEEEEEEEEecCCCC----CccCCccchhhhccCCCC
Q 014605 183 QMPIDWLVQLVPPL---------KTRAFSISSSPLA---HPNQVHLTVSVVSWTTPYK----RKRTGLCSVWLAGLDPQQ 246 (421)
Q Consensus 183 ~~p~~~ll~~lp~~---------~pR~YSIaSsp~~---~~~~i~l~V~~v~~~~~~~----~~~~G~~S~~L~~l~~~~ 246 (421)
..|||++...+|.. .+|+|||+|+|.. +++.++|+|+++.|..+.. ..+.|.+|+||+++++
T Consensus 61 ~~pGQ~v~l~~~~~~~~~~g~~~~~R~ySias~p~~~~~~~~~~~l~Vk~~~~~~~~~~~~~~~~~G~~S~~L~~l~~-- 138 (311)
T 3lo8_A 61 YWEGQSYGVIPPGENPKKPGAPQNVRLYSIASTRYGDNFDGRTGSLCVRRAVYYDPETGKEDPSKNGVCSNFLCNSKP-- 138 (311)
T ss_dssp CCTTCEEEEECSSBCTTSTTCBCCCEEEEBCSCTTTTTTSSSEEEEEEECCCCCCTTTCCCCGGGSCHHHHHHHTCCT--
T ss_pred ccCCCEEEEeCCCCccccCCCCCCceeeEecCCCcccCCCCCEEEEEEEEEEecccccCcCCcCCCCchhhHHhcCCC--
Confidence 35889887777753 6899999999864 2589999998765443321 1367999999999999
Q ss_pred CceEEEEeecCCCCC-C--CCCCCeEEEeCCCcchhHHHHHHHHHHhcCCC--CCCCEEEEEcccCCCccccHHHHHHhh
Q 014605 247 GIYIPAWFQKGSLPR-P--PPSVPLILIGPGTGCAPFRGFVEERAIQSSSG--PAAPIIFFFGCRNEDDFLYRELWLSHS 321 (421)
Q Consensus 247 G~~v~i~~~~g~F~l-p--~~~~piimIa~GTGIAPf~s~l~~~~~~~~~~--~~~~~~L~~G~R~~~d~ly~del~~~~ 321 (421)
|+.|.+.+|.|.|.+ | +...|+||||+|||||||++|++++..+...+ ..++++||||||+.+|++|.+||+++.
T Consensus 139 Gd~v~v~gP~G~~~~~~~~~~~~~~vlIagGtGIaP~~s~l~~~~~~~~~~~~~~~~v~l~~g~r~~~d~~~~~el~~l~ 218 (311)
T 3lo8_A 139 GDKIQLTGPSGKIMLLPEEDPNATHIMIATGTGVAPFRGYLRRMFMEDVPNYRFGGLAWLFLGVANSDSLLYDEEFTSYL 218 (311)
T ss_dssp TCEEEEEEEECCTTCCCCSCTTCEEEEEEEGGGGHHHHHHHHHHHTEECTTCCCCSEEEEEEEESSGGGCSSHHHHHHHH
T ss_pred cCEEEEEeccCCcccCCCcCCCCCEEEEECCEEHHHHHHHHHHHHHhccccccCCCCEEEEEecCChHHhhHHHHHHHHH
Confidence 999999999998764 4 26789999999999999999999988754311 125799999999999999999999998
Q ss_pred hcCC-CccccCCCcEEEEeccCCC----CcccchhhHHHcHHHHHHHhcCCCEEEEeCCCCccHHHHHHHHHHHHHHhCC
Q 014605 322 LNDG-VFSEAKGGGFYVAFSRKQP----QKVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGE 396 (421)
Q Consensus 322 ~~~g-~l~~~~~~~~~~a~Sr~~~----~k~yVqd~l~~~~~~v~~~l~~~~~iyVCG~~~~m~~~V~~~L~~i~~~~~~ 396 (421)
+.++ ++ ++++++||+++ .++||++.+.+..+.+++++..++.||+|||+ .|+++|+++|.+++.+.+
T Consensus 219 ~~~~~~~------~~~~~~s~~~~~~~g~~~~v~~~l~~~~~~~~~~~~~~~~vyvCGp~-~m~~~v~~~L~~~~~~~g- 290 (311)
T 3lo8_A 219 KQYPDNF------RYDKALSREQKNRSGGKMYVQDKIEEYSDEIFKLLDGGAHIYFCGLK-GMMPGIQDTLKKVAERRG- 290 (311)
T ss_dssp HHCTTTE------EEEEEETTTC-------CCHHHHHHHTHHHHHHHHHTTCEEEEEECG-GGHHHHHHHHHHHHHHTT-
T ss_pred HhCCCcE------EEEEEECCCCcccCCCcceehHHHHHHHHHHHHhhcCCcEEEEECCH-HHHHHHHHHHHHHHHhcc-
Confidence 7744 78 89999999864 47899999999888888877778999999998 999999999999998765
Q ss_pred CCHHHHHHHHHHHHHCCCEEEeec
Q 014605 397 ASRDSAANWLKALQRAGRYHVEAW 420 (421)
Q Consensus 397 ~~~~~a~~~l~~l~~~~Ry~~dvW 420 (421)
++|++|+++|+++|||++|+|
T Consensus 291 ---~~~~~~~~~l~~~~ry~~e~y 311 (311)
T 3lo8_A 291 ---ESWDQKLAQLKKNKQWHVEVY 311 (311)
T ss_dssp ---CCHHHHHHHHHHTTCEEEEEC
T ss_pred ---HHHHHHHHHHHHCCcEEEecC
Confidence 367899999999999999999
No 15
>3jqq_A Ferredoxin NADP reductase; FAD, oxidoreductase; HET: FAD A2P; 2.20A {Plasmodium falciparum} PDB: 2ok8_A* 2ok7_A* 3jqr_A* 3jqp_A*
Probab=100.00 E-value=1.6e-34 Score=284.16 Aligned_cols=283 Identities=19% Similarity=0.297 Sum_probs=205.8
Q ss_pred ccee-eEEEeeeecCCCCCCcEEEEEEEecCCCcccCCCCEEEEccCCCHHHHHHHHHHcCCCCCceEEEeeCCccCCCC
Q 014605 22 VCFL-KMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQDPAAVDTFIQRCNLDPDALITVQHKEMKNYLP 100 (421)
Q Consensus 22 ~~~~-~v~~~~~lt~~~~~~~v~~i~l~~~~~~~~y~~GD~l~v~p~N~~~~V~~~l~~l~l~~~~~v~~~~~~~~~~~~ 100 (421)
+.|. +|+++.+|+.++...+|+||+|+.+ ..+.|.+|.+++|.|+..+.. . +.+. ..
T Consensus 14 ~p~~~~v~~~~~l~~~~~~~~v~~~~~~~~-~~~~~~~GQ~~~i~~~~~~~~-----~-------------~~~~--~~- 71 (316)
T 3jqq_A 14 NPLKCKIVDKINLVRPNSPNEVYHLEINHN-GLFKYLEGHTCGIIPYYNELD-----N-------------NPNN--QI- 71 (316)
T ss_dssp SCEEEEEEEEEECSCTTCSCCEEEEEEECT-TCCCCCTTCEEEECTTCC-------------------------------
T ss_pred CCEEEEEEeeEEccCCCCCCceEEEEEeCC-CCcceecCcEeEEECCCcccc-----c-------------cccc--cc-
Confidence 3466 9999999999988899999999996 579999999999999876432 0 0000 00
Q ss_pred CccCCCCCccccHHHHHHhcccccCCCCcHHHHHHHHHhcCChhHHHHHHhhcCCCChHHHHHHHHhcCCCHHHHhhhCC
Q 014605 101 DIHKNTTEVPIKLRTFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASPEGRDDLYKYNQKERRTVLEVLEDFP 180 (421)
Q Consensus 101 ~~~~~~~~~~~tl~~~l~~~~Dl~~~~p~~~~l~~la~~~~~~~~k~~L~~l~~~~~~~~~~~~~~~~~~tl~d~l~~f~ 180 (421)
+.+ . .++-++. .+ . +..+.
T Consensus 72 -------~~~---~----~~~~~~~-------------~~-------------------~--------h~~~~------- 90 (316)
T 3jqq_A 72 -------NKD---H----NIINTTN-------------HT-------------------N--------HNNIA------- 90 (316)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -------ccc---c----ccccccc-------------cc-------------------c--------ccccc-------
Confidence 000 0 0000000 00 0 00000
Q ss_pred CCCCCHHHHHHhcCCCCCCceeeccCCCCCCCeEEEEEEEEEecCC---CCCccCCccchhhhccCCCCCceEEEEeecC
Q 014605 181 SVQMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTP---YKRKRTGLCSVWLAGLDPQQGIYIPAWFQKG 257 (421)
Q Consensus 181 s~~~p~~~ll~~lp~~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~---~~~~~~G~~S~~L~~l~~~~G~~v~i~~~~g 257 (421)
. ...-+...+|+|||+|+|.. +.++|+|+++.|.+. .++.+.|.||+||+++++ |+.|.+.+|.|
T Consensus 91 --~------~~~~g~~~~R~ySIaS~p~~--~~l~l~Vk~~~y~~~~~~~~~~~~G~~S~~L~~l~~--Gd~v~v~gP~G 158 (316)
T 3jqq_A 91 --L------SHIKKQRCARLYSISSSNNM--ENLSVAIKIHKYEQTENAPNITNYGYCSGFIKNLKI--NDDIYLTGAHG 158 (316)
T ss_dssp --------------CCCCEEEEBCSCTTS--SSEEEEEECCBC---------CCBCHHHHHHHTCCT--TCEEEEEEEEC
T ss_pred --c------ccCCCcccceeeecccCCCC--CeEEEEEEEEEecccccccCcCCCCchhHHHhhCCC--CCEEEEEecCC
Confidence 0 00114568999999999964 789999998877643 234578999999999999 99999999999
Q ss_pred CCCCC-C---CCCCeEEEeCCCcchhHHHHHHHHHHhcCC-------CCCCCEEEEEcccCCCccccHHHHHHhhhcCC-
Q 014605 258 SLPRP-P---PSVPLILIGPGTGCAPFRGFVEERAIQSSS-------GPAAPIIFFFGCRNEDDFLYRELWLSHSLNDG- 325 (421)
Q Consensus 258 ~F~lp-~---~~~piimIa~GTGIAPf~s~l~~~~~~~~~-------~~~~~~~L~~G~R~~~d~ly~del~~~~~~~g- 325 (421)
.|.++ + ..+|+||||+|||||||++|++++...... ...++++||||||+.+|++|.+||+++.+.++
T Consensus 159 ~f~l~~~~~~~~~~vvlIAgGtGIaP~~sil~~l~~~~~~~~~~~~~~~~~~v~L~~g~R~~~d~~~~~eL~~l~~~~~~ 238 (316)
T 3jqq_A 159 YFNLPNDAIQKNTNFIFIATGTGISPYISFLKKLFAYDKNNLYNRNSNYTGYITIYYGVYNEDSILYLNELEYFQKMYPN 238 (316)
T ss_dssp CCCCCTTHHHHTCCEEEEEEGGGGHHHHHHHHHHTTCCGGGTTCCCCCCCCCEEEEEEESSGGGCTTHHHHHHHHHHCTT
T ss_pred ceEcCCcccCCCCcEEEEeCCceechHHHHHHHHHHhccccccccccCCCCcEEEEEEecCHHHhhcHHHHHHHHHhCCC
Confidence 99998 4 378999999999999999999998865310 02378999999999999999999999987654
Q ss_pred CccccCCCcEEEEeccCCC---CcccchhhHHHcHHHHHHHhc-CCCEEEEeCCCCccHHHHHHHHHHHHHHhCCCCHHH
Q 014605 326 VFSEAKGGGFYVAFSRKQP---QKVYVQHKMLEQSQRIWNLLL-SKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDS 401 (421)
Q Consensus 326 ~l~~~~~~~~~~a~Sr~~~---~k~yVqd~l~~~~~~v~~~l~-~~~~iyVCG~~~~m~~~V~~~L~~i~~~~~~~~~~~ 401 (421)
++ ++++++||+++ .++|||+.+.+..+.+++++. .++.||+|||+ .|.++++++|.+. ++++.
T Consensus 239 ~~------~~~~~~s~~~~~~g~~g~V~~~l~~~~~~~~~~l~~~~~~vyvCGP~-~m~~~v~~~l~~~----G~~~~-- 305 (316)
T 3jqq_A 239 NI------NIHYVFSYKQNSDATSFYVQDEIYKRKTEFLNLFNNYKCELYICGKK-SIRYKVMDILKSH----DQFDE-- 305 (316)
T ss_dssp TE------EEEEEEGGGCC---CBCCHHHHHHHTHHHHHHHHHHTCCEEEEEECS-THHHHHHHHHHC--------CH--
T ss_pred cE------EEEEEECCCcccCCCccchhHHHHHhHHHHHHhhccCCeEEEEeCCH-HHHHHHHHHHHHc----CCCcc--
Confidence 78 89999999853 589999999998888888775 48999999998 9999888777654 33322
Q ss_pred HHHHHHHHHHCCCEEEeec
Q 014605 402 AANWLKALQRAGRYHVEAW 420 (421)
Q Consensus 402 a~~~l~~l~~~~Ry~~dvW 420 (421)
...+|++.|+|
T Consensus 306 --------v~~~rih~E~f 316 (316)
T 3jqq_A 306 --------KKKKRVHVEVY 316 (316)
T ss_dssp --------HHHTTEEEEEC
T ss_pred --------cccccEEEEeC
Confidence 34578998876
No 16
>1tvc_A Methane monooxygenase component C, methane monooxygenase; FAD-binding, NADH-binding, oxidoreductase; HET: FDA; NMR {Methylococcus capsulatus} SCOP: b.43.4.2 c.25.1.2
Probab=99.95 E-value=5.1e-28 Score=229.50 Aligned_cols=181 Identities=15% Similarity=0.168 Sum_probs=150.9
Q ss_pred CCHHHHHHhcCC-CCCCceeeccCCCCCCCeEEEEEEEEEecCCCCCccCCccchhhh-ccCCCCCceEEEEeecCCCCC
Q 014605 184 MPIDWLVQLVPP-LKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLA-GLDPQQGIYIPAWFQKGSLPR 261 (421)
Q Consensus 184 ~p~~~ll~~lp~-~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~~~~~~G~~S~~L~-~l~~~~G~~v~i~~~~g~F~l 261 (421)
.|+|++...+|. ...|+|||+|+|.. .+.++|+| ++...|.+|+||. ++++ |+.|.+.+|.|.|.+
T Consensus 45 ~pGQ~v~l~~~~~~~~R~ySi~s~~~~-~~~l~i~v---------k~~~~G~~s~~l~~~l~~--Gd~v~v~gP~G~~~~ 112 (250)
T 1tvc_A 45 EPGQFMDLTIPGTDVSRSYSPANLPNP-EGRLEFLI---------RVLPEGRFSDYLRNDARV--GQVLSVKGPLGVFGL 112 (250)
T ss_dssp CSCCEEEECTTSCSSSEEECCBCCSSS-SCCEEEEE---------CCCTTSSSHHHHHHHSSS--SSEEEEEEEECCCSC
T ss_pred CCCcEEEEEeCCCccccccccCCCCCC-CCeEEEEE---------EECCCCCchHHHHhcCCC--CCEEEEEcCcccccc
Confidence 588888777776 57899999999853 58899999 3445799999996 8999 999999999999998
Q ss_pred C-CCCCCeEEEeCCCcchhHHHHHHHHHHhcCCCCCCCEEEEEcccCCCccccHHHHHHhhhcCCCccccCCCcEEEEec
Q 014605 262 P-PPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFS 340 (421)
Q Consensus 262 p-~~~~piimIa~GTGIAPf~s~l~~~~~~~~~~~~~~~~L~~G~R~~~d~ly~del~~~~~~~g~l~~~~~~~~~~a~S 340 (421)
+ +...+++|||+|||||||++++++....+.. .+++|+||+|+.+|++|.+||+++.+.++++ ++++++|
T Consensus 113 ~~~~~~~~vliagGtGiaP~~~~l~~l~~~~~~---~~v~l~~~~r~~~~~~~~~el~~l~~~~~~~------~~~~~~s 183 (250)
T 1tvc_A 113 KERGMAPRYFVAGGTGLAPVVSMVRQMQEWTAP---NETRIYFGVNTEPELFYIDELKSLERSMRNL------TVKACVW 183 (250)
T ss_dssp CCCSSSCEEEEEESSTTHHHHHHHHHHHHHTCC---SCEEEEEECSSSTTCCCHHHHHHHHHHSSSC------EEEECCS
T ss_pred CccCCceEEEEEeccCHHHHHHHHHHHHhcCCC---ceEEEEEEeCCHHHhhhHHHHHHHHHhCCCe------EEEEEec
Confidence 8 5558999999999999999999999876543 7899999999999999999999998765788 8999999
Q ss_pred cCCC----CcccchhhHHHcHHHHHHHhcCCCEEEEeCCCCccHHHHHHHHHHH
Q 014605 341 RKQP----QKVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEI 390 (421)
Q Consensus 341 r~~~----~k~yVqd~l~~~~~~v~~~l~~~~~iyVCG~~~~m~~~V~~~L~~i 390 (421)
++++ .++||++.+.+.. .+. ..+..+|+|||+ .|+++|++.|.+.
T Consensus 184 ~~~~~~~g~~g~v~~~l~~~~---~~~-~~~~~vyvCGp~-~m~~~v~~~l~~~ 232 (250)
T 1tvc_A 184 HPSGDWEGEQGSPIDALREDL---ESS-DANPDIYLCGPP-GMIDAACELVRSR 232 (250)
T ss_dssp SCSSCCSSSSSSSSHHHHHHH---HHS-SSSSEEEEESSH-HHHHHHHHHHHHH
T ss_pred cCCCCcCCccceehHHHHhhh---hcc-cCCcEEEEeCCH-HHHHHHHHHHHHc
Confidence 8533 4778988776432 111 247899999998 9999998887643
No 17
>2r6h_A NADH:ubiquinone oxidoreductase, Na translocating, subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2; HET: FAD; 2.95A {Porphyromonas gingivalis}
Probab=99.94 E-value=1.2e-27 Score=231.59 Aligned_cols=181 Identities=19% Similarity=0.334 Sum_probs=142.0
Q ss_pred CCCCceeeccCCCCCCCeEEEEEEEEEec--CC----CCCccCCccchhhhccCCCCCceEEEEeecCCCCCCCCCCCeE
Q 014605 196 LKTRAFSISSSPLAHPNQVHLTVSVVSWT--TP----YKRKRTGLCSVWLAGLDPQQGIYIPAWFQKGSLPRPPPSVPLI 269 (421)
Q Consensus 196 ~~pR~YSIaSsp~~~~~~i~l~V~~v~~~--~~----~~~~~~G~~S~~L~~l~~~~G~~v~i~~~~g~F~lp~~~~pii 269 (421)
..+|+|||+|++.. .+.++|+|+++... +. .++.+.|.+|+||+++++ |+.|.+.+|.|.|.+++...++|
T Consensus 84 ~~~R~ySi~s~~~~-~~~l~l~v~~~~~~~~~~~~~~~~~~~~G~~S~~l~~l~~--Gd~v~v~gP~G~f~~~~~~~~~v 160 (290)
T 2r6h_A 84 ETVRAYSMANYPAE-GNIITLNVRIATPPFDRAANKWKAGIKPGISSSYIFSLKP--GDKVMMSGPYGDFHIQDTDAEML 160 (290)
T ss_dssp CEEEEEECCSCTTC-CSEEEEEEECCCCCEETTTTEECTTCCCCHHHHHHTTCCT--TCEEEEEEEECCCCCCSSSCEEE
T ss_pred CcceeeeccCCCCC-CCEEEEEEEEeccccccccccccccCCCcchhhHHhcCCC--CCEEEEEecccCCcCCCCCCeEE
Confidence 45799999999854 57899999753211 10 012457999999999999 99999999999999876678999
Q ss_pred EEeCCCcchhHHHHHHHHHHhcCCCCCCCEEEEEcccCCCccccHHHHHHhhhcCCCccccCCCcEEEEeccCCC-----
Q 014605 270 LIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQP----- 344 (421)
Q Consensus 270 mIa~GTGIAPf~s~l~~~~~~~~~~~~~~~~L~~G~R~~~d~ly~del~~~~~~~g~l~~~~~~~~~~a~Sr~~~----- 344 (421)
|||+|||||||++|++++...... ..+++||||+|+.+|++|.+||+++.+.++++ ++++++||++.
T Consensus 161 liagGtGitP~~s~l~~~~~~~~~--~~~v~l~~~~r~~~d~~~~~el~~l~~~~~~~------~~~~~~s~~~~~~~~~ 232 (290)
T 2r6h_A 161 YIGGGAGMAPLRAQILHLFRTLKT--GRKVSYWYGARSKNEIFYEEDFREIEREFPNF------KFHIALSDPQPEDNWT 232 (290)
T ss_dssp EEEEGGGHHHHHHHHHHHHHTSCC--CSCEEEEEEESSGGGCCSHHHHHHHHHHCTTE------EEEEEESSCCGGGCCC
T ss_pred EEECccCHHHHHHHHHHHHHhcCC--CCcEEEEEEcCCHHHHHHHHHHHHHHHhCCCe------EEEEEEccCCcccCCC
Confidence 999999999999999988765321 27899999999999999999999998765778 89999998642
Q ss_pred -CcccchhhHHHcHHHHHHHh-cCCCEEEEeCCCCccHHHHHHHHHHH
Q 014605 345 -QKVYVQHKMLEQSQRIWNLL-LSKASIYVAGSATKMPSDVWSTFEEI 390 (421)
Q Consensus 345 -~k~yVqd~l~~~~~~v~~~l-~~~~~iyVCG~~~~m~~~V~~~L~~i 390 (421)
.++||++.+.+. .+.+.. ..++.+|+|||+ .|+++|++.|.+.
T Consensus 233 g~~g~v~~~~~~~--~l~~~~~~~~~~vyvCGp~-~m~~~v~~~l~~~ 277 (290)
T 2r6h_A 233 GYVGFIHQVIYDN--YLKDHDAPEDIEYYMCGPG-PMANAVKGMLENL 277 (290)
T ss_dssp SCBSCHHHHHHHH--TTTTCSCGGGEEEEEECCH-HHHHHHHHHHHHH
T ss_pred CeeEecCHHHHHh--HHhhccCcCCcEEEEECCH-HHHHHHHHHHHHc
Confidence 367888766432 011111 125789999998 9999999888654
No 18
>1qfj_A Protein (flavin reductase); riboflavin, ferredoxin reductase superfami oxidoreductase; 2.20A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1
Probab=99.94 E-value=1.4e-27 Score=223.78 Aligned_cols=176 Identities=18% Similarity=0.209 Sum_probs=143.9
Q ss_pred CCHHHHHHhcCCCCCCceeeccCCCCCCCeEEEEEEEEEecCCCCCccCCccchh-hhccCCCCCceEEEEeecCCCCCC
Q 014605 184 MPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVW-LAGLDPQQGIYIPAWFQKGSLPRP 262 (421)
Q Consensus 184 ~p~~~ll~~lp~~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~~~~~~G~~S~~-L~~l~~~~G~~v~i~~~~g~F~lp 262 (421)
.|+|++...+|....|+|||+|+|.. ++.++|+|++ ...|.+|++ +.++++ |+.|.+.+|.|.|.++
T Consensus 31 ~pGq~v~l~~~~~~~R~ySi~s~~~~-~~~l~l~i~~---------~~~G~~s~~~~~~l~~--Gd~v~v~gP~G~~~~~ 98 (232)
T 1qfj_A 31 RAGQYLMVVMDERDKRPFSMASTPDE-KGFIELHIGA---------SEINLYAKAVMDRILK--DHQIVVDIPHGEAWLR 98 (232)
T ss_dssp CTTCEEEEESSSSCEEEEECCSCTTS-TTCEEEEEC---------------CCHHHHHHHHH--HSEEEEEEEECSCCCC
T ss_pred CCCCEEEEECCCCceeeeecCCCCCC-CCcEEEEEEE---------ccCCchhHHHHHhCCC--CCEEEEeCCccceEeC
Confidence 58998888888888999999999864 5789999943 345666765 678999 9999999999999987
Q ss_pred -CCCCCeEEEeCCCcchhHHHHHHHHHHhcCCCCCCCEEEEEcccCCCccccHHHHHHhhhcCCCccccCCCcEEEEecc
Q 014605 263 -PPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSR 341 (421)
Q Consensus 263 -~~~~piimIa~GTGIAPf~s~l~~~~~~~~~~~~~~~~L~~G~R~~~d~ly~del~~~~~~~g~l~~~~~~~~~~a~Sr 341 (421)
+..++++|||+|||||||+++++++...+.. .+++|+||+|+.+|++|.+||+++.+.++++ +++.++|+
T Consensus 99 ~~~~~~~vliagG~GitP~~~~l~~l~~~~~~---~~v~l~~~~r~~~~~~~~~el~~l~~~~~~~------~~~~~~s~ 169 (232)
T 1qfj_A 99 DDEERPMILIAGGTGFSYARSILLTALARNPN---RDITIYWGGREEQHLYDLCELEALSLKHPGL------QVVPVVEQ 169 (232)
T ss_dssp SCSSSCEEEEEETTCHHHHHHHHHHHHHHCTT---CCEEEEEEESSGGGCTTHHHHHHHHHHCTTE------EEEEEESS
T ss_pred CCCCCcEEEEEecccHhHHHHHHHHHHhcCCC---CcEEEEEeeCCHHHhhhHHHHHHHHHHCCCe------EEEEEEcC
Confidence 5578999999999999999999999887544 7899999999999999999999998765788 89999998
Q ss_pred CCC----CcccchhhHHHcHHHHHHHhc-CCCEEEEeCCCCccHHHHHHHH
Q 014605 342 KQP----QKVYVQHKMLEQSQRIWNLLL-SKASIYVAGSATKMPSDVWSTF 387 (421)
Q Consensus 342 ~~~----~k~yVqd~l~~~~~~v~~~l~-~~~~iyVCG~~~~m~~~V~~~L 387 (421)
+++ .++||++.+.+. +.. .++.+|+|||+ .|+++|++.|
T Consensus 170 ~~~~~~g~~g~v~~~~~~~------~~~~~~~~vyvCGp~-~m~~~v~~~l 213 (232)
T 1qfj_A 170 PEAGWRGRTGTVLTAVLQD------HGTLAEHDIYIAGRF-EMAKIARDLF 213 (232)
T ss_dssp CCTTCCSEESCHHHHHHHH------CSCCTTCEEEEESCH-HHHHHHHHHH
T ss_pred CCCCcCCceeeHHHHHHHh------cCCccccEEEEECCH-HHHHHHHHHH
Confidence 654 357887766542 111 37899999998 9999998877
No 19
>1fdr_A Flavodoxin reductase; ferredoxin reductase, flavin, oxidoreductase, flavoprotein; HET: FAD; 1.70A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1 PDB: 2xnj_A* 3fpk_A*
Probab=99.94 E-value=1.4e-27 Score=225.95 Aligned_cols=184 Identities=16% Similarity=0.172 Sum_probs=148.4
Q ss_pred CCHHHHHHhcCC---CCCCceeeccCCCCCCCeEEEEEEEEEecCCCCCccCCccchhhhccCCCCCceEEEE-eecCCC
Q 014605 184 MPIDWLVQLVPP---LKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIPAW-FQKGSL 259 (421)
Q Consensus 184 ~p~~~ll~~lp~---~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~~~~~~G~~S~~L~~l~~~~G~~v~i~-~~~g~F 259 (421)
.|+|++...+|. ...|+|||+|+|.. +.++|+|+. .+.|.+|+||+++++ |+.|.+. +|.|.|
T Consensus 32 ~pGq~v~l~~~~~g~~~~R~ySi~s~~~~--~~l~~~v~~---------~~~G~~s~~l~~l~~--Gd~v~v~~gP~G~f 98 (248)
T 1fdr_A 32 TAGQFTKLGLEIDGERVQRAYSYVNSPDN--PDLEFYLVT---------VPDGKLSPRLAALKP--GDEVQVVSEAAGFF 98 (248)
T ss_dssp CTTCEEEEEECC---CEEEEEECCSCTTC--SSEEEEEEC---------CTTCSSHHHHHTCCT--TCEEEEESSCBCCC
T ss_pred CCCCcEEEEccCCCCeeeeeecccCCCCC--CcEEEEEEE---------eCCCchhhHHHhCCC--cCEEEEecCCccee
Confidence 588888777773 46799999999864 789999843 357999999999999 9999999 899999
Q ss_pred CCC-CC-CCCeEEEeCCCcchhHHHHHHHHHHhcCCCCCCCEEEEEcccCCCccccHHHHHHhhhcC-CCccccCCCcEE
Q 014605 260 PRP-PP-SVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFLYRELWLSHSLND-GVFSEAKGGGFY 336 (421)
Q Consensus 260 ~lp-~~-~~piimIa~GTGIAPf~s~l~~~~~~~~~~~~~~~~L~~G~R~~~d~ly~del~~~~~~~-g~l~~~~~~~~~ 336 (421)
.++ .. ..+++|||+|||||||++++++....+.. .+++|+||+|+.+|++|.+||+++.+.+ +++ +++
T Consensus 99 ~l~~~~~~~~~vliagG~GitP~~~~l~~l~~~~~~---~~v~l~~~~r~~~~~~~~~el~~l~~~~~~~~------~~~ 169 (248)
T 1fdr_A 99 VLDEVPHCETLWMLATGTAIGPYLSILRLGKDLDRF---KNLVLVHAARYAADLSYLPLMQELEKRYEGKL------RIQ 169 (248)
T ss_dssp SGGGSCCCSEEEEEEEGGGGHHHHHHHHHCCSCTTC---SEEEEEEEESSGGGCTTHHHHHHHHHHTTTSE------EEE
T ss_pred EcCCCCCCceEEEEEecccHHHHHHHHHHHHhhCCC---CcEEEEEEcCCHHHhhHHHHHHHHHHhCcCcE------EEE
Confidence 987 43 68999999999999999999987543322 7899999999999999999999998754 478 899
Q ss_pred EEeccCCC---CcccchhhHHHcH-HHHHHH-hc-CCCEEEEeCCCCccHHHHHHHH-HHH
Q 014605 337 VAFSRKQP---QKVYVQHKMLEQS-QRIWNL-LL-SKASIYVAGSATKMPSDVWSTF-EEI 390 (421)
Q Consensus 337 ~a~Sr~~~---~k~yVqd~l~~~~-~~v~~~-l~-~~~~iyVCG~~~~m~~~V~~~L-~~i 390 (421)
.++|+++. .+++|++.+.+.. +..... .. .++.+|+|||+ .|+++|++.| .+.
T Consensus 170 ~~~s~~~~~~~~~g~v~~~l~~~~l~~~~~~~~~~~~~~vy~CGp~-~m~~~v~~~l~~~~ 229 (248)
T 1fdr_A 170 TVVSRETAAGSLTGRIPALIESGELESTIGLPMNKETSHVMLCGNP-QMVRDTQQLLKETR 229 (248)
T ss_dssp EEESSSCCTTEEESCHHHHHHTSHHHHHHTSCCCTTTEEEEEEECH-HHHHHHHHHHHHHH
T ss_pred EEEecCCCCCCcceeeChHHHhhhHHHhhccCCCccCCEEEEeCCH-HHHHHHHHHHHHHc
Confidence 99999765 3688988876542 222111 12 36899999998 9999999888 553
No 20
>1krh_A Benzoate 1,2-dioxygenase reductase; alpha-beta, FAD-binding, ferredoxin, NADH-binding, oxidoreductase; HET: FAD; 1.50A {Acinetobacter SP} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=99.94 E-value=4.5e-27 Score=232.84 Aligned_cols=178 Identities=21% Similarity=0.279 Sum_probs=150.9
Q ss_pred CCHHHHHHhcCC-CCCCceeeccCCCCCCCeEEEEEEEEEecCCCCCccCCccchhhh-ccCCCCCceEEEEeecCCCCC
Q 014605 184 MPIDWLVQLVPP-LKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLA-GLDPQQGIYIPAWFQKGSLPR 261 (421)
Q Consensus 184 ~p~~~ll~~lp~-~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~~~~~~G~~S~~L~-~l~~~~G~~v~i~~~~g~F~l 261 (421)
.|+|++...+|. ..+|+|||+|+|. .+.++|+|+ +...|.+|+||+ ++++ |+.|.+.+|.|.|.+
T Consensus 140 ~pGQ~v~l~~~~~~~~R~ySi~s~~~--~~~l~~~vk---------~~~~G~~S~~L~~~l~~--Gd~v~v~gP~G~f~~ 206 (338)
T 1krh_A 140 LAGQYVNVTLPGTTETRSYSFSSQPG--NRLTGFVVR---------NVPQGKMSEYLSVQAKA--GDKMSFTGPFGSFYL 206 (338)
T ss_dssp CTTCEEEEECTTSSCEEEEECCSCTT--CSEEEEEEE---------CCTTCHHHHHHHTTCCT--TCEEEEEEEECSCSC
T ss_pred CCCCeEEEEcCCCCccccccccCCCC--CCeEEEEEE---------EcCCCCchhhHhhccCC--CCEEEEECCccceEe
Confidence 589998888886 5789999999986 589999994 345799999995 8999 999999999999998
Q ss_pred CCCCCCeEEEeCCCcchhHHHHHHHHHHhcCCCCCCCEEEEEcccCCCccccHHHHHHhhhcCCCccccCCCcEEEEecc
Q 014605 262 PPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSR 341 (421)
Q Consensus 262 p~~~~piimIa~GTGIAPf~s~l~~~~~~~~~~~~~~~~L~~G~R~~~d~ly~del~~~~~~~g~l~~~~~~~~~~a~Sr 341 (421)
+....+++|||+|||||||+++++++...+.. .+++||||+|+.+|++|.+||+++.+.++++ ++++++|+
T Consensus 207 ~~~~~~~vliagGtGiaP~~s~l~~l~~~~~~---~~v~l~~~~r~~~d~~~~~el~~l~~~~~~~------~~~~~~s~ 277 (338)
T 1krh_A 207 RDVKRPVLMLAGGTGIAPFLSMLQVLEQKGSE---HPVRLVFGVTQDCDLVALEQLDALQQKLPWF------EYRTVVAH 277 (338)
T ss_dssp CCCSSCEEEEEEGGGHHHHHHHHHHHHHHCCS---SCEEEEEEESSGGGCCCHHHHHHHHHHCTTE------EEEEEETT
T ss_pred CCCCceEEEEEccccHhHHHHHHHHHHHcCCC---CeEEEEEEeCCHHHhhhHHHHHHHHHhCCCe------EEEEEEec
Confidence 84358999999999999999999999887544 7899999999999999999999998765788 89999998
Q ss_pred CCC---CcccchhhHHHcHHHHHHHhc-CCCEEEEeCCCCccHHHHHHHHHHH
Q 014605 342 KQP---QKVYVQHKMLEQSQRIWNLLL-SKASIYVAGSATKMPSDVWSTFEEI 390 (421)
Q Consensus 342 ~~~---~k~yVqd~l~~~~~~v~~~l~-~~~~iyVCG~~~~m~~~V~~~L~~i 390 (421)
+++ .++||++.+.+. .+. .+..+|+|||+ .|++++++.|.+.
T Consensus 278 ~~~~~~~~g~v~~~l~~~------~~~~~~~~vy~CGp~-~m~~~v~~~l~~~ 323 (338)
T 1krh_A 278 AESQHERKGYVTGHIEYD------WLNGGEVDVYLCGPV-PMVEAVRSWLDTQ 323 (338)
T ss_dssp CCSSSSEESCSGGGCCGG------GGGGGCSEEEEEEEH-HHHHHHHHHHHHH
T ss_pred CCCCCCccCccCHHHHHh------hcccCCcEEEEECCH-HHHHHHHHHHHHc
Confidence 765 367899887632 111 36789999998 9999998887653
No 21
>2eix_A NADH-cytochrome B5 reductase; flavoprotein, FAD-binding domain, NADH-binding, oxidoreducta; HET: FAD; 1.56A {Physarum polycephalum}
Probab=99.94 E-value=1.9e-27 Score=224.35 Aligned_cols=180 Identities=18% Similarity=0.203 Sum_probs=145.5
Q ss_pred CCHHHHHHhcCC---CCCCceeeccCCCCCCCeEEEEEEEEEecCCCCCccCCccchhhhccCCCCCceEEEEeecCCCC
Q 014605 184 MPIDWLVQLVPP---LKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIPAWFQKGSLP 260 (421)
Q Consensus 184 ~p~~~ll~~lp~---~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~~~~~~G~~S~~L~~l~~~~G~~v~i~~~~g~F~ 260 (421)
.|+|++...+|. ...|+|||+|.+.. ++.++|+|+ +...|.+|+||+++++ |+.|.+.+|.|.|.
T Consensus 43 ~pGq~v~l~~~~~g~~~~R~ysi~s~~~~-~~~~~l~vk---------~~~~G~~S~~l~~l~~--Gd~v~v~gP~G~f~ 110 (243)
T 2eix_A 43 PIGQHMSVKATVDGKEIYRPYTPVSSDDE-KGYFDLIIK---------VYEKGQMSQYIDHLNP--GDFLQVRGPKGQFD 110 (243)
T ss_dssp CTTCEEEEEEEETTEEEEEEECCCSCTTC-CSEEEEEEE---------CCTTCHHHHHHHTCCT--TCEEEEEEEECSCC
T ss_pred CCceEEEEEEeeCCCEEEeeeeecCCCCC-CCEEEEEEE---------EcCCCCcchHhhcCCC--CCEEEEECCeEEEE
Confidence 578887776652 35799999999853 589999994 3457999999999999 99999999999999
Q ss_pred CC-CCCCCeEEEeCCCcchhHHHHHHHHHHhcCCCCCCCEEEEEcccCCCccccHHHHHHhhhcCCCccccCCCcEEEEe
Q 014605 261 RP-PPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAF 339 (421)
Q Consensus 261 lp-~~~~piimIa~GTGIAPf~s~l~~~~~~~~~~~~~~~~L~~G~R~~~d~ly~del~~~~~~~g~l~~~~~~~~~~a~ 339 (421)
++ +...+++|||+|||||||+++++++...... ..+++|+||+|+.+|++|++||+++.+.++++ +++.++
T Consensus 111 ~~~~~~~~~vliagG~GiaP~~~~l~~l~~~~~~--~~~v~l~~~~r~~~~~~~~~el~~l~~~~~~~------~~~~~~ 182 (243)
T 2eix_A 111 YKPNMVKEMGMIAGGTGITPMLQVARAIIKNPKE--KTIINLIFANVNEDDILLRTELDDMAKKYSNF------KVYYVL 182 (243)
T ss_dssp CCTTSSSEEEEEEEGGGHHHHHHHHHHHHTCTTC--CCEEEEEEEEEEGGGCTTHHHHHHHHHHCTTE------EEEEEE
T ss_pred eCCCCCcEEEEEecCccHHHHHHHHHHHHhCCCC--CcEEEEEEEcCCHHHhhHHHHHHHHHHHCCCe------EEEEEe
Confidence 88 5568999999999999999999998764211 26899999999999999999999998765778 899999
Q ss_pred ccCCC----CcccchhhHHHcHHHHHHHhc---CCCEEEEeCCCCccHHHHHHHHHHH
Q 014605 340 SRKQP----QKVYVQHKMLEQSQRIWNLLL---SKASIYVAGSATKMPSDVWSTFEEI 390 (421)
Q Consensus 340 Sr~~~----~k~yVqd~l~~~~~~v~~~l~---~~~~iyVCG~~~~m~~~V~~~L~~i 390 (421)
|++++ .++||++.+.+ +.+. .++.+|+|||+ .|+++|++.|.+.
T Consensus 183 s~~~~~~~g~~g~v~~~~l~------~~~~~~~~~~~vy~CGp~-~m~~~v~~~l~~~ 233 (243)
T 2eix_A 183 NNPPAGWTGGVGFVSADMIK------QHFSPPSSDIKVMMCGPP-MMNKAMQGHLETL 233 (243)
T ss_dssp EECCTTCCSEESSCCHHHHH------HHSCCTTSSEEEEEESSH-HHHHHHHHHHHHH
T ss_pred CCCCccccCcCCccCHHHHH------HhcCCCCCCeEEEEECCH-HHHHHHHHHHHHc
Confidence 98543 35788753321 1222 35689999998 9999999888654
No 22
>1umk_A B5R, NADH-cytochrome B5 reductase; flavoprotein, beta barrel, FAD-binding domain, NADH-binding domain, oxidoreductase; HET: FAD; 1.75A {Homo sapiens} SCOP: b.43.4.2 c.25.1.1 PDB: 1ndh_A* 1i7p_A* 1ib0_A* 1qx4_A*
Probab=99.94 E-value=1.6e-27 Score=229.11 Aligned_cols=192 Identities=17% Similarity=0.165 Sum_probs=149.1
Q ss_pred CCHHHHHHhcC---CCCCCceeeccCCCCCCCeEEEEEEEEEecCCCCCccCCccchhhhccCCCCCceEEEEeecCCCC
Q 014605 184 MPIDWLVQLVP---PLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIPAWFQKGSLP 260 (421)
Q Consensus 184 ~p~~~ll~~lp---~~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~~~~~~G~~S~~L~~l~~~~G~~v~i~~~~g~F~ 260 (421)
.|+|++...+| ...+|+|||+|++.. ++.++|+|+++.+.++.+....|.+|+||+++++ |+.|.+.+|.|.|.
T Consensus 48 ~pGQ~v~l~~~~~g~~~~R~ySi~s~~~~-~~~~~l~vk~~~~~~~~~~~~~G~~S~~L~~l~~--Gd~v~v~gP~G~~~ 124 (275)
T 1umk_A 48 PVGQHIYLSARIDGNLVVRPYTPISSDDD-KGFVDLVIKVYFKDTHPKFPAGGKMSQYLESMQI--GDTIEFRGPSGLLV 124 (275)
T ss_dssp CTTCEEEEEEEETTEEEEEEECCSSCTTC-CSEEEEEEECCCSSSBTTBTTCCHHHHHHHHCCT--TCEEEEEEEECSEE
T ss_pred CCCcEEEEEEeeCCcEEEeccccCCccCC-CCeEEEEEEEeccCcccccCCCChhHHHHhcCCC--CCEEEEEcCccceE
Confidence 57888766654 236899999999853 5899999987766554444467999999999999 99999999999874
Q ss_pred C--------C-C--------CCCCeEEEeCCCcchhHHHHHHHHHHhcCCCCCCCEEEEEcccCCCccccHHHHHHhhhc
Q 014605 261 R--------P-P--------PSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFLYRELWLSHSLN 323 (421)
Q Consensus 261 l--------p-~--------~~~piimIa~GTGIAPf~s~l~~~~~~~~~~~~~~~~L~~G~R~~~d~ly~del~~~~~~ 323 (421)
+ + + ...+++|||+|||||||++|++++..... ...+++|+||+|+.+|++|.+||+++.+.
T Consensus 125 ~~~~~~f~l~~~~~~~~~~~~~~~~vliagGtGIaP~~~~l~~l~~~~~--~~~~v~l~~~~r~~~d~~~~~el~~l~~~ 202 (275)
T 1umk_A 125 YQGKGKFAIRPDKKSNPIIRTVKSVGMIAGGTGITPMLQVIRAIMKDPD--DHTVCHLLFANQTEKDILLRPELEELRNK 202 (275)
T ss_dssp EEETTEEEECSSTTSCCEEEECSEEEEEEEGGGHHHHHHHHHHHHTCTT--CCCEEEEEEEESSGGGCTTHHHHHHHHHH
T ss_pred ecCCccccccccccccccccCCceEEEEecCccHhHHHHHHHHHHhCCC--CCcEEEEEEEcCCHHHhhHHHHHHHHHHh
Confidence 3 2 1 35789999999999999999999876421 12789999999999999999999999876
Q ss_pred CC-CccccCCCcEEEEeccCCC----CcccchhhHHHcHHHHHHHhcCCCEEEEeCCCCccHH-HHHHHHHHH
Q 014605 324 DG-VFSEAKGGGFYVAFSRKQP----QKVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPS-DVWSTFEEI 390 (421)
Q Consensus 324 ~g-~l~~~~~~~~~~a~Sr~~~----~k~yVqd~l~~~~~~v~~~l~~~~~iyVCG~~~~m~~-~V~~~L~~i 390 (421)
++ ++ +++.++|+++. .++||++.+.+. .+ .....++.+|+|||+ .|++ ++++.|.+.
T Consensus 203 ~~~~~------~~~~~~s~~~~~~~~~~g~v~~~~l~~--~l-~~~~~~~~vyvCGp~-~m~~~~v~~~L~~~ 265 (275)
T 1umk_A 203 HSARF------KLWYTLDRAPEAWDYGQGFVNEEMIRD--HL-PPPEEEPLVLMCGPP-PMIQYACLPNLDHV 265 (275)
T ss_dssp CTTTE------EEEEEESSCCSSCSSEESSCCHHHHHH--HS-CCGGGCCEEEEESCH-HHHHHTTHHHHHHH
T ss_pred CcCcE------EEEEEEcCCCccccCccCccCHHHHHH--hc-CCCCCCeEEEEECCH-HHHHHHHHHHHHHc
Confidence 44 57 88999998654 367887743221 11 011237899999998 8998 888888654
No 23
>4eh1_A Flavohemoprotein; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: FAD; 2.20A {Vibrio cholerae o1 biovar el tor}
Probab=99.94 E-value=5.6e-27 Score=221.00 Aligned_cols=180 Identities=17% Similarity=0.272 Sum_probs=145.8
Q ss_pred CCHHHHHHhcCCC-----CCCceeeccCCCCCCCeEEEEEEEEEecCCCCCccCCccchhhh-ccCCCCCceEEEEeecC
Q 014605 184 MPIDWLVQLVPPL-----KTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLA-GLDPQQGIYIPAWFQKG 257 (421)
Q Consensus 184 ~p~~~ll~~lp~~-----~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~~~~~~G~~S~~L~-~l~~~~G~~v~i~~~~g 257 (421)
.|+|++...+|.. .+|+|||+|+|.. +.++|+|+.+.. +....|.+|+||+ ++++ |+.|.+.+|.|
T Consensus 35 ~pGq~v~l~~~~~~~~~~~~R~ySi~s~~~~--~~~~i~vk~~~~----~~~~~G~~S~~l~~~l~~--G~~v~v~gP~G 106 (243)
T 4eh1_A 35 QPGQYIGIEVTPEGSDYREIRQYSLSHASNG--REYRISVKREGV----GSDNPGLVSHYLHNNVKV--GDSVKLYAPAG 106 (243)
T ss_dssp CTTCEEEEEECCSSCSSCEEEEEEBCSCCCS--SCEEEEEECTTT----TSSSCCHHHHHHHHHCCT--TCEEEEEEEEC
T ss_pred CCCCEEEEEEecCCCccccceeeEeccCCCC--CeEEEEEEEeec----CCCCCCeehhHHHhcCCC--CCEEEEEccCc
Confidence 4889888877742 3699999999853 789999853210 1126799999997 6999 99999999999
Q ss_pred CCCCCCCCCCeEEEeCCCcchhHHHHHHHHHHhcCCCCCCCEEEEEcccCCCccccHHHHHHhhhcCCCccccCCCcEEE
Q 014605 258 SLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYV 337 (421)
Q Consensus 258 ~F~lp~~~~piimIa~GTGIAPf~s~l~~~~~~~~~~~~~~~~L~~G~R~~~d~ly~del~~~~~~~g~l~~~~~~~~~~ 337 (421)
.|.+++...+++|||+|||||||+++++++..+... . ++|+||+|+.+|++|.+||+++.+.+ ++ ++++
T Consensus 107 ~~~~~~~~~~~vliagGtGitp~~~~l~~l~~~~~~---~-v~l~~~~r~~~~~~~~~el~~l~~~~-~~------~~~~ 175 (243)
T 4eh1_A 107 DFFYVERERPVVLISAGVGATPMQAILHTLAKQNKS---G-VTYLYACNSAKEHTFAQETAQLIAQQ-GW------MQQV 175 (243)
T ss_dssp SCCCCCCSSCEEEEEEGGGHHHHHHHHHHHHHTTCC---S-EEEEEEESSGGGCTTHHHHHHHHHHH-TC------EEEE
T ss_pred ccCcCCCCCCEEEEEccccHHHHHHHHHHHHHcCCC---e-EEEEEEeCChhhhhHHHHHHHHHHhC-Ce------EEEE
Confidence 999886678999999999999999999999876543 4 99999999999999999999998874 77 8999
Q ss_pred EeccCCC---CcccchhhHHHcHHHHHHHhcCCCEEEEeCCCCccHHHHHHHHHHH
Q 014605 338 AFSRKQP---QKVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEI 390 (421)
Q Consensus 338 a~Sr~~~---~k~yVqd~l~~~~~~v~~~l~~~~~iyVCG~~~~m~~~V~~~L~~i 390 (421)
++|++.+ .++++++.+. . +-..+..+|+|||+ .|+++|++.|.+.
T Consensus 176 ~~s~~~~~~~~~g~~~~~~~-~------~~~~~~~vyvCGp~-~m~~~v~~~l~~~ 223 (243)
T 4eh1_A 176 WYRDESADDVLQGEMQLAEL-I------LPIEDGDFYLCGPI-GFMQYVVKQLLAL 223 (243)
T ss_dssp EESSCCCTTCEESSCCCTTS-C------CCTTTCEEEEEECH-HHHHHHHHHHHHH
T ss_pred EEccCCCcccccCCccHHHe-e------ccCCCcEEEEECCH-HHHHHHHHHHHHc
Confidence 9998655 3566665443 1 11247899999998 8999999888754
No 24
>4fk8_A Ferredoxin--NADP reductase; ssgcid, NIH, niaid, structural genomics, national institute allergy and infectious diseases; HET: FAD; 2.10A {Burkholderia thailandensis} PDB: 4f7d_A*
Probab=99.93 E-value=1.1e-27 Score=229.77 Aligned_cols=200 Identities=18% Similarity=0.251 Sum_probs=153.7
Q ss_pred CCHHHHHHhcCC---CCCCceeeccCCCCCCCeEEEEEEEEEecCCCCCccCCccchhhhccCCCCCceEEEE-eecCCC
Q 014605 184 MPIDWLVQLVPP---LKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIPAW-FQKGSL 259 (421)
Q Consensus 184 ~p~~~ll~~lp~---~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~~~~~~G~~S~~L~~l~~~~G~~v~i~-~~~g~F 259 (421)
.|+|++...+|. ...|+|||+|+|. .+.++|+|. +...|.+|+||+++++ |+.|.+. +|.|.|
T Consensus 48 ~pGQ~v~l~~~~~~~~~~r~ySi~s~~~--~~~~~~~v~---------~~~~G~~s~~l~~l~~--Gd~v~v~~gP~G~~ 114 (271)
T 4fk8_A 48 NNGEFTMVGLEVDGKPLTRAYSIVSPNY--EEHLEFFSI---------KVQNGPLTSRLQHLKV--GDPVLIGKKPTGTL 114 (271)
T ss_dssp CTTCEEEEEEEETTEEEEEEEECCSCTT--SSSEEEEEE---------CCTTCTTHHHHTTCCT--TCEEEEESCCBCSC
T ss_pred CCCCEEEEEccCCCceeeeeEeccCCCC--CCcEEEEEE---------EECCCchhhHHhcCCC--CCEEEEecCCCcce
Confidence 588888877772 3579999999985 367998883 3457999999999999 9999999 999999
Q ss_pred CCCC--CCCCeEEEeCCCcchhHHHHHHHHHHhcCCCCCCCEEEEEcccCCCccccHHHHHHhhhcCC--------Cccc
Q 014605 260 PRPP--PSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFLYRELWLSHSLNDG--------VFSE 329 (421)
Q Consensus 260 ~lp~--~~~piimIa~GTGIAPf~s~l~~~~~~~~~~~~~~~~L~~G~R~~~d~ly~del~~~~~~~g--------~l~~ 329 (421)
.++. ...+++|||+|||||||+++++++...... .+++|+||+|+.+|++|.+||+++.+.++ ++
T Consensus 115 ~~~~~~~~~~~vliagG~GitP~~~~l~~l~~~~~~---~~v~l~~~~r~~~~~~~~~el~~l~~~~~~~~~~~~~~~-- 189 (271)
T 4fk8_A 115 VADNLLPGKTLWMLSTGTGLAPFMSIIRDPDIYERF---DKVVLTHTCRLKGELAYMDYIKHDLPGHEYLGDVIREKL-- 189 (271)
T ss_dssp CGGGBCCCSEEEEEECGGGGHHHHHHTTCHHHHHHC---SEEEEEECCCSHHHHHHHHHHHTCCTTCTTHHHHHHHHE--
T ss_pred ecCCcCCCCeEEEEECCEEHHHHHHHHHHHHhcCCC---CCEEEEEecCCHHHHhHHHHHHHHHHhCccccccccceE--
Confidence 8873 678999999999999999999998765544 78999999999999999999999877643 46
Q ss_pred cCCCcEEEEeccCCC-CcccchhhHHHcHHHHHHH-----h-cCCCEEEEeCCCCccHHHHHHHHHHHHHHhCCCCHHHH
Q 014605 330 AKGGGFYVAFSRKQP-QKVYVQHKMLEQSQRIWNL-----L-LSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSA 402 (421)
Q Consensus 330 ~~~~~~~~a~Sr~~~-~k~yVqd~l~~~~~~v~~~-----l-~~~~~iyVCG~~~~m~~~V~~~L~~i~~~~~~~~~~~a 402 (421)
+++.++|+++. .+++|++.+.+. .+.+. + .+++.+|+|||+ .|+++|++.|.+.......
T Consensus 190 ----~~~~~~s~~~~~~~G~v~~~~~~~--~l~~~~~~~~~~~~~~~v~vCGp~-~m~~~v~~~l~~~gv~~~~------ 256 (271)
T 4fk8_A 190 ----VYYPTVTREEFENEGRITDLIASG--KLFTDLDMPPFSPEQDRVMLCGST-AMLKDTTELLKKAGLVEGK------ 256 (271)
T ss_dssp ----EEEECC-------CCHHHHHHHHS--HHHHHTTCCCCCTTTEEEEEEECH-HHHHHHHHHHHHTTCCBCB------
T ss_pred ----EEEEEecCCccccccccChHHhcc--hhhhhcccccCCCCCCEEEEECCH-HHHHHHHHHHHHcCCchhh------
Confidence 78888888764 467888877553 11111 1 237899999998 9999999988765433221
Q ss_pred HHHHHHHHHCCCEEEeec
Q 014605 403 ANWLKALQRAGRYHVEAW 420 (421)
Q Consensus 403 ~~~l~~l~~~~Ry~~dvW 420 (421)
+...|+|+.|.|
T Consensus 257 ------i~~~~~~~~E~y 268 (271)
T 4fk8_A 257 ------NSAPGHYVIERA 268 (271)
T ss_dssp ------TTBCBSEEEEES
T ss_pred ------cCCCCcEEEEEe
Confidence 233678888765
No 25
>1gvh_A Flavohemoprotein; oxidoreductase, NADP, heme, flavoprotein, FAD, iron transpor; HET: FAD HEM; 2.19A {Escherichia coli} SCOP: a.1.1.2 b.43.4.2 c.25.1.5
Probab=99.93 E-value=4.1e-26 Score=230.72 Aligned_cols=178 Identities=15% Similarity=0.209 Sum_probs=145.1
Q ss_pred CCCHHHHHHhcCC-----CCCCceeeccCCCCCCCeEEEEEEEEEecCCCCCccCCccchhhhc-cCCCCCceEEEEeec
Q 014605 183 QMPIDWLVQLVPP-----LKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAG-LDPQQGIYIPAWFQK 256 (421)
Q Consensus 183 ~~p~~~ll~~lp~-----~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~~~~~~G~~S~~L~~-l~~~~G~~v~i~~~~ 256 (421)
..|||++...+|+ ...|+|||+|+|. ++.++|+|+. ...|.+|+||++ +++ ||.|.+.+|.
T Consensus 183 ~~pGQ~v~l~~~~~~~~~~~~R~YSi~s~p~--~~~~~i~Vk~---------~~~G~~S~~L~~~l~~--Gd~v~v~gP~ 249 (396)
T 1gvh_A 183 YRPGQYLGVWLKPEGFPHQEIRQYSLTRKPD--GKGYRIAVKR---------EEGGQVSNWLHNHANV--GDVVKLVAPA 249 (396)
T ss_dssp CCTTCEEEEEECCTTCSSCEEEEEECCSCCC--SSCEEEEEEC---------CTTCHHHHHHHHTCCT--TCEEEEEEEE
T ss_pred CCCCCeEEEEecCCCCccceeecceeccCCC--CCeEEEEEEE---------cCCCcchHHHHhcCCC--CCEEEEEcCC
Confidence 3588988777763 3479999999986 4789999943 346999999996 999 9999999999
Q ss_pred CCCCCC-CCCCCeEEEeCCCcchhHHHHHHHHHHhcCCCCCCCEEEEEcccCCCccccHHHHHHhhhcCCCccccCCCcE
Q 014605 257 GSLPRP-PPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGF 335 (421)
Q Consensus 257 g~F~lp-~~~~piimIa~GTGIAPf~s~l~~~~~~~~~~~~~~~~L~~G~R~~~d~ly~del~~~~~~~g~l~~~~~~~~ 335 (421)
|.|.++ +..+|++|||+|||||||+++++++...+.. .+++|+||+|+.+|++|++||+++.+.++++ ++
T Consensus 250 G~f~l~~~~~~~~vlIagGtGitP~~s~l~~l~~~~~~---~~v~l~~~~r~~~~~~~~~el~~l~~~~~~~------~~ 320 (396)
T 1gvh_A 250 GDFFMAVADDTPVTLISAGVGQTPMLAMLDTLAKAGHT---AQVNWFHAAENGDVHAFADEVKELGQSLPRF------TA 320 (396)
T ss_dssp CSCCCCCCTTCCEEEEEEGGGGHHHHHHHHHHHHHTCC---SCEEEEEEESCTTTCCSHHHHHHHHHTSSSE------EE
T ss_pred cceECCCCCCCCEEEEecchhHhHHHHHHHHHHhcCCC---CcEEEEEEeCCHHHhhhHHHHHHHHHHCCCe------EE
Confidence 999998 6788999999999999999999999876544 7899999999999999999999998876778 89
Q ss_pred EEEeccCCC---------Ccccchhh-HHHcHHHHHHHhcCCCEEEEeCCCCccHHHHHHHHHH
Q 014605 336 YVAFSRKQP---------QKVYVQHK-MLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEE 389 (421)
Q Consensus 336 ~~a~Sr~~~---------~k~yVqd~-l~~~~~~v~~~l~~~~~iyVCG~~~~m~~~V~~~L~~ 389 (421)
++++|+++. .+++++.. +.+.. .+ .++.+|+|||+ .|+++|++.|.+
T Consensus 321 ~~~~s~~~~~~~~~~~~~~~G~~~~~~l~~~~-----~~-~~~~vyvCGp~-~m~~~v~~~L~~ 377 (396)
T 1gvh_A 321 HTWYRQPSEADRAKGQFDSEGLMDLSKLEGAF-----SD-PTMQFYLCGPV-GFMQFTAKQLVD 377 (396)
T ss_dssp EEEESSCCHHHHHHTCCSEESSCCGGGSSSCC-----CC-TTCEEEEESCH-HHHHHHHHHHHH
T ss_pred EEEECCCCccccccCccCccCcCCHHHHhhcc-----CC-CCCEEEEeCCH-HHHHHHHHHHHH
Confidence 999998753 23455432 22110 11 27899999998 999999888764
No 26
>2bgi_A Ferredoxin-NADP(H) reductase; ferredoxin(flavodoxin)-NADP(H) reductase, flavoproteins, electron transfer, oxidoreductase; HET: FAD HTG; 1.68A {Rhodobacter capsulatus} PDB: 2bgj_A* 2vnh_A* 2vni_A* 2vnj_A* 2vnk_A*
Probab=99.93 E-value=1.3e-26 Score=222.75 Aligned_cols=183 Identities=17% Similarity=0.218 Sum_probs=146.7
Q ss_pred CCHHHHHHhcCC----CCCCceeeccCCCCCCCeEEEEEEEEEecCCCCCccCCccchhhhccCCCCCceEEEE-eecCC
Q 014605 184 MPIDWLVQLVPP----LKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIPAW-FQKGS 258 (421)
Q Consensus 184 ~p~~~ll~~lp~----~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~~~~~~G~~S~~L~~l~~~~G~~v~i~-~~~g~ 258 (421)
.|+|++...+|. ...|+|||+|++.. +.++|+|+. .+.|.+|+||+++++ |+.|.+. +|.|.
T Consensus 45 ~pGQ~v~l~~~~~~g~~~~R~ySi~s~~~~--~~~~l~v~~---------~~~G~~s~~l~~l~~--Gd~v~v~~gP~G~ 111 (272)
T 2bgi_A 45 RSGEFVMIGLLDDNGKPIMRAYSIASPAWD--EELEFYSIK---------VPDGPLTSRLQHIKV--GEQIILRPKPVGT 111 (272)
T ss_dssp CTTCEEEEEEECTTSCEEEEEEECCSCTTC--SEEEEEEEC---------CTTCTTHHHHTTCCT--TCEEEEEEEEECS
T ss_pred CCCCEEEEEeccCCCCeeeeeeeeccCCCC--CeEEEEEEE---------ccCCCchhHHHhCCC--CCEEEEeeCCCCc
Confidence 588888777762 35799999999863 789998843 356999999999999 9999999 89999
Q ss_pred CCCC-CC-CCCeEEEeCCCcchhHHHHHHHHHHhcCCCCCCCEEEEEcccCCCccccHHHHH-Hhhh-----cC--CCcc
Q 014605 259 LPRP-PP-SVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFLYRELWL-SHSL-----ND--GVFS 328 (421)
Q Consensus 259 F~lp-~~-~~piimIa~GTGIAPf~s~l~~~~~~~~~~~~~~~~L~~G~R~~~d~ly~del~-~~~~-----~~--g~l~ 328 (421)
|.++ .. ..+++|||+|||||||+++++++...... .+++|+||+|+.+|++|.+||+ ++.+ .+ +++
T Consensus 112 f~~~~~~~~~~~vliagG~GiaP~~~~l~~l~~~~~~---~~v~l~~~~r~~~~~~~~~el~~~l~~~~~~~~~~~~~~- 187 (272)
T 2bgi_A 112 LVIDALLPGKRLWFLATGTGIAPFASLMREPEAYEKF---DEVIMMHACRTVAELEYGRQLVEALQEDPLIGELVEGKL- 187 (272)
T ss_dssp CCGGGBCCCSEEEEEEEGGGGHHHHHHTTCGGGGTSC---SEEEEEEEESSSGGGHHHHHHHHHHHHCTTTTTTSTTTE-
T ss_pred ccccccccCCeEEEEeecccHHHHHHHHHHHHhcCCC---CcEEEEEEeCCHHHhhHHHHHHHHHHhcchhhcccCCcE-
Confidence 9887 33 68999999999999999999987654333 6899999999999999999999 8876 32 577
Q ss_pred ccCCCcEEEEeccCCC-CcccchhhHHHcH-HHHHHH--hc-CCCEEEEeCCCCccHHHHHHHHHH
Q 014605 329 EAKGGGFYVAFSRKQP-QKVYVQHKMLEQS-QRIWNL--LL-SKASIYVAGSATKMPSDVWSTFEE 389 (421)
Q Consensus 329 ~~~~~~~~~a~Sr~~~-~k~yVqd~l~~~~-~~v~~~--l~-~~~~iyVCG~~~~m~~~V~~~L~~ 389 (421)
+++.++|+++. .++||++.+.+.. +....+ +. .++.+|+|||+ .|+++|++.|.+
T Consensus 188 -----~~~~~~s~~~~~~~g~v~~~l~~~~l~~~~~~~~~~~~~~~vyvCGp~-~m~~~v~~~l~~ 247 (272)
T 2bgi_A 188 -----KYYPTTTREEFHHMGRITDNLASGKVFEDLGIAPMNPETDRAMVCGSL-AFNVDVMKVLES 247 (272)
T ss_dssp -----EEEEEESSSCCSSBCCHHHHHHSCHHHHHHTCCCCCTTTEEEEEEECH-HHHHHHHHHHHT
T ss_pred -----EEEEEecCCccccCceechHHHhhhHhhhcccccCCCCCcEEEEECCH-HHHHHHHHHHHH
Confidence 88999998743 4789998876532 111111 11 47899999998 999999887764
No 27
>4g1v_A Flavohemoglobin; three domains: globin fold, antiparallel beta-barrel, alpha/ fold, RESP., FAD, oxidoreductase; HET: HEM FAD; 2.10A {Saccharomyces cerevisiae} PDB: 4g1b_A*
Probab=99.93 E-value=9.9e-26 Score=228.21 Aligned_cols=181 Identities=17% Similarity=0.227 Sum_probs=146.8
Q ss_pred CCHHHHHHhc--C--C---CCCCceeeccCCCCCCCeEEEEEEEEEecCCCCCccCCccchhhh-ccCCCCCceEEEEee
Q 014605 184 MPIDWLVQLV--P--P---LKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLA-GLDPQQGIYIPAWFQ 255 (421)
Q Consensus 184 ~p~~~ll~~l--p--~---~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~~~~~~G~~S~~L~-~l~~~~G~~v~i~~~ 255 (421)
.|||++...+ | . ..+|+|||+|+|. ++.++|+|+...- .+..+.|.+|+||+ ++++ ||.|.+.+|
T Consensus 185 ~pGQ~v~l~~~~~~~~~~~~~~R~ySi~s~p~--~~~~~i~Vk~~~~---~~~~~~G~~S~~L~~~l~~--Gd~v~v~gP 257 (399)
T 4g1v_A 185 TPGQYITVNTHPIRQENQYDALRHYSLCSAST--KNGLRFAVKMEAA---RENFPAGLVSEYLHKDAKV--GDEIKLSAP 257 (399)
T ss_dssp CTTCEEEEEECCCSTTCCSCEEEEEEBSCSCC--TTCEEEEEECCCC---BTTBCCCHHHHHHHHTCCT--TCEEEEEEE
T ss_pred CCCCEEEEEEeCCCCCCccceeeeecccCCCC--CCeEEEEEEeccC---CCCCCCCEehhHHHhCCCC--CCEEEEEec
Confidence 5889887775 4 3 3579999999985 4789999854211 01135899999996 8999 999999999
Q ss_pred cCCCCCC-C----CCCCeEEEeCCCcchhHHHHHHHHHHhcCCCCCCCEEEEEcccCCCccccHHHHHHhhhcCCCcccc
Q 014605 256 KGSLPRP-P----PSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFLYRELWLSHSLNDGVFSEA 330 (421)
Q Consensus 256 ~g~F~lp-~----~~~piimIa~GTGIAPf~s~l~~~~~~~~~~~~~~~~L~~G~R~~~d~ly~del~~~~~~~g~l~~~ 330 (421)
.|.|.++ + ..+|++|||+|||||||++|++++...+.. .+++++||+|+.+|++|.+||+++.+.++++
T Consensus 258 ~G~f~l~~~~~~~~~~~~vlIagG~GitP~~s~l~~l~~~~~~---~~v~l~~~~r~~~~~~~~~el~~l~~~~~~~--- 331 (399)
T 4g1v_A 258 AGDFAINKELIHQNEVPLVLLSSGVGVTPLLAMLEEQVKCNPN---RPIYWIQSSYDEKTQAFKKHVDELLAECANV--- 331 (399)
T ss_dssp ECSCCCCTTTTTCSSSCEEEEEEGGGHHHHHHHHHHHHHHCTT---SCEEEEEEESSSTTSTTHHHHHHHHTTCSSE---
T ss_pred ccceeeCcccccCCCCCEEEEecceeHhHHHHHHHHHHHcCCC---CCEEEEEecCCHHHhhhHHHHHHHHHhCCCc---
Confidence 9999998 5 578999999999999999999999887654 7899999999999999999999998776788
Q ss_pred CCCcEEEEeccCCCCcccchhhHHHcHHHHHHHhcCCCEEEEeCCCCccHHHHHHHHHHH
Q 014605 331 KGGGFYVAFSRKQPQKVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEI 390 (421)
Q Consensus 331 ~~~~~~~a~Sr~~~~k~yVqd~l~~~~~~v~~~l~~~~~iyVCG~~~~m~~~V~~~L~~i 390 (421)
++++++|+++ ++++. +.+.+.+.+++.+|+|||+ .|+++|++.|.+.
T Consensus 332 ---~~~~~~s~~~---g~~~~------~~l~~~~~~~~~vyvCGp~-~m~~~v~~~L~~~ 378 (399)
T 4g1v_A 332 ---DKIIVHTDTE---PLINA------AFLKEKSPAHADVYTCGSL-AFMQAMIGHLKEL 378 (399)
T ss_dssp ---EEEEEETTTS---CCCCH------HHHHHHSCSSCEEEEEECH-HHHHHHHHHHHHT
T ss_pred ---EEEEEEeCCC---CcccH------HHHHhhCCCCCEEEEECCH-HHHHHHHHHHHHc
Confidence 8999999865 45543 2223344458999999998 9999999888654
No 28
>2qdx_A Ferredoxin reductase; oxidoreductase; HET: FAD; 1.55A {Pseudomonas aeruginosa} PDB: 3crz_A* 1a8p_A*
Probab=99.93 E-value=9.6e-27 Score=221.59 Aligned_cols=183 Identities=17% Similarity=0.206 Sum_probs=146.1
Q ss_pred CCHHHHHHhcCC---CCCCceeeccCCCCCCCeEEEEEEEEEecCCCCCccCCccchhhhccCCCCCceEEEE-eecCCC
Q 014605 184 MPIDWLVQLVPP---LKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIPAW-FQKGSL 259 (421)
Q Consensus 184 ~p~~~ll~~lp~---~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~~~~~~G~~S~~L~~l~~~~G~~v~i~-~~~g~F 259 (421)
.|+|++...+|. ...|+|||+|+|.. +.++|+|+. .+.|.+|+||+++++ |+.|.+. +|.|.|
T Consensus 32 ~pGq~v~l~~~~~g~~~~R~ySi~s~~~~--~~~~~~i~~---------~~~G~~s~~l~~l~~--Gd~v~v~~gp~G~f 98 (257)
T 2qdx_A 32 KTGQFVMIGLEVDGRPLMRAYSIASPNYE--EHLEFFSIK---------VPDGPLTSRLQHLKE--GDELMVSRKPTGTL 98 (257)
T ss_dssp CTTCEEEEEEEETTEEEEEEEECCSCTTS--SEEEEEEEC---------CTTCTTHHHHTTCCT--TCEEEECSCCBCSC
T ss_pred CCCCEEEEEecCCCCceeeeeEeecCCCC--CeEEEEEEE---------eCCCcchhHHHhCCC--CCEEEEecCCCCCc
Confidence 588887777763 36799999999863 789998843 357999999999999 9999999 799999
Q ss_pred CCC-C-CCCCeEEEeCCCcchhHHHHHHHHHHhcCCCCCCCEEEEEcccCCCccccHHHHH-Hhhh-----cC--CCccc
Q 014605 260 PRP-P-PSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFLYRELWL-SHSL-----ND--GVFSE 329 (421)
Q Consensus 260 ~lp-~-~~~piimIa~GTGIAPf~s~l~~~~~~~~~~~~~~~~L~~G~R~~~d~ly~del~-~~~~-----~~--g~l~~ 329 (421)
.++ . ...+++|||+|||||||+++++++...+.. .+++|+||+|+.+|++|.+||+ ++.+ .+ +++
T Consensus 99 ~~~~~~~~~~~vliagG~GitP~~~~l~~l~~~~~~---~~v~l~~~~r~~~~~~~~~el~~~l~~~~~~~~~~~~~~-- 173 (257)
T 2qdx_A 99 VHDDLLPGKHLYLLSTGTGMAPFLSVIQDPETYERY---EKVILVHGVRWVSELAYADFITKVLPEHEYFGDQVKEKL-- 173 (257)
T ss_dssp CGGGBCSCSEEEEEEEGGGGHHHHHHTTCHHHHHHC---SEEEEEEEESSGGGCTTHHHHHTTGGGCTTTHHHHHHHE--
T ss_pred cCCcccCCCeEEEEEeceEHHHHHHHHHHHHhcCCC---CeEEEEEEcCCHHHhHhHHHHHHHHHhchhhhccCCCcE--
Confidence 887 3 368999999999999999999987765433 6899999999999999999999 8876 21 467
Q ss_pred cCCCcEEEEeccCCC-CcccchhhHHHcH-HHHHHH--h-cCCCEEEEeCCCCccHHHHHHHHHH
Q 014605 330 AKGGGFYVAFSRKQP-QKVYVQHKMLEQS-QRIWNL--L-LSKASIYVAGSATKMPSDVWSTFEE 389 (421)
Q Consensus 330 ~~~~~~~~a~Sr~~~-~k~yVqd~l~~~~-~~v~~~--l-~~~~~iyVCG~~~~m~~~V~~~L~~ 389 (421)
+++.++|+++. .+++|++.+.+.. ++...+ + ..++.+|+|||+ .|+++|++.|.+
T Consensus 174 ----~~~~~~s~~~~~~~g~v~~~l~~~~l~~~~~~~~~~~~~~~vyvCGp~-~m~~~v~~~l~~ 233 (257)
T 2qdx_A 174 ----IYYPLVTREPFRNQGRQTDLMRSGKLFEDIGLPPMNPQDDRAMICGSP-SMLEETSAVLDS 233 (257)
T ss_dssp ----EEEEEESSSCCSSBSCHHHHHHHSHHHHHHTCCCCCTTTEEEEEEECH-HHHHHHHHHHHH
T ss_pred ----EEEEEecCCCcccCceechhhhhhhHHHhcccccCCcCCCEEEEECCH-HHHHHHHHHHHH
Confidence 88899998743 4789998876532 111111 1 146899999998 999999888764
No 29
>1ep3_B Dihydroorotate dehydrogenase B (PYRK subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: b.43.4.2 c.25.1.3 PDB: 1ep1_B* 1ep2_B*
Probab=99.92 E-value=8.1e-26 Score=216.08 Aligned_cols=169 Identities=18% Similarity=0.216 Sum_probs=136.8
Q ss_pred CCHHHHHHhcCC---CCCCceeeccCCCCCCCeEEEEEEEEEecCCCCCccCCccchhhhccCCCCCceEEEEeecCC-C
Q 014605 184 MPIDWLVQLVPP---LKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIPAWFQKGS-L 259 (421)
Q Consensus 184 ~p~~~ll~~lp~---~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~~~~~~G~~S~~L~~l~~~~G~~v~i~~~~g~-F 259 (421)
.|+|++...+|. ..+|+|||+|+|.. .+.++|+|+ +.+.|.+|+||+++++ ||.|.+.+|.|+ |
T Consensus 35 ~pGQ~v~l~~~~~~~~~~R~ySi~s~~~~-~~~l~~~vk---------~~~~G~~S~~l~~l~~--Gd~v~v~gP~G~~f 102 (262)
T 1ep3_B 35 LPGQFLHLAVPNGAMLLRRPISISSWDKR-AKTCTILYR---------IGDETTGTYKLSKLES--GAKVDVMGPLGNGF 102 (262)
T ss_dssp STTCEEEECCSCTTCCSCEEEECCEEETT-TTEEEEEEE---------CCCTTSHHHHHHTCCT--TCEEEEEEEESBCC
T ss_pred CCCceEEEEcCCCCceeeEEEEeeeecCC-CCEEEEEEE---------EecCCchHHHHhcCCC--CCEEEEEcccCCCc
Confidence 478887777774 68999999999853 588999994 3347999999999999 999999999997 9
Q ss_pred CCCC--CCCCeEEEeCCCcchhHHHHHHHHHHhcCCCCCCCEEEEEcccCCCccccHHHHHHhhhcCCCccccCCCcEEE
Q 014605 260 PRPP--PSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYV 337 (421)
Q Consensus 260 ~lp~--~~~piimIa~GTGIAPf~s~l~~~~~~~~~~~~~~~~L~~G~R~~~d~ly~del~~~~~~~g~l~~~~~~~~~~ 337 (421)
.++. ...+++|||+|||||||+++++++...+ .+++|+||+|+++|++|.+||+++... ++++
T Consensus 103 ~l~~~~~~~~~lliagGtGitP~~s~l~~l~~~~-----~~v~l~~~~r~~~~~~~~~el~~l~~~----------~~~~ 167 (262)
T 1ep3_B 103 PVAEVTSTDKILIIGGGIGVPPLYELAKQLEKTG-----CQMTILLGFASENVKILENEFSNLKNV----------TLKI 167 (262)
T ss_dssp CCTTCCTTSEEEEEEEGGGSHHHHHHHHHHHHHT-----CEEEEEEEESSGGGCCCHHHHHTSTTE----------EEEE
T ss_pred cCCCccCCCeEEEEECcCcHHHHHHHHHHHHHcC-----CeEEEEEEcCCHHHhhhHHHHhhhccC----------cEEE
Confidence 9884 4789999999999999999999998763 689999999999999999999987532 2333
Q ss_pred EeccCC--CCcccchhhHHHcHHHHHHHhcCCCEEEEeCCCCccHHHHHHHHHH
Q 014605 338 AFSRKQ--PQKVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEE 389 (421)
Q Consensus 338 a~Sr~~--~~k~yVqd~l~~~~~~v~~~l~~~~~iyVCG~~~~m~~~V~~~L~~ 389 (421)
+ ++++ ..++||++.+.+. +.+++.+|+|||+ .|+++|++ |.+
T Consensus 168 ~-~~~~~~~~~g~v~~~l~~~-------~~~~~~vyvCGp~-~m~~~v~~-l~~ 211 (262)
T 1ep3_B 168 A-TDDGSYGTKGHVGMLMNEI-------DFEVDALYTCGAP-AMLKAVAK-KYD 211 (262)
T ss_dssp E-ETTCSSSEESCHHHHHHHC-------CSCCSEEEEESCH-HHHHHHHH-HTT
T ss_pred E-ECCCCCcceeehHHHHHhh-------ccCCCEEEEECCH-HHHHHHHH-HHh
Confidence 3 3433 2467888866543 3347899999998 99999988 753
No 30
>2cnd_A NADH-dependent nitrate reductase; nitrate assimilating enzyme, oxidoreductase, nitrogenous acceptor; HET: FAD; 2.50A {Zea mays} SCOP: b.43.4.2 c.25.1.1 PDB: 1cnf_A* 1cne_A*
Probab=99.92 E-value=3.6e-26 Score=218.93 Aligned_cols=189 Identities=17% Similarity=0.169 Sum_probs=141.4
Q ss_pred CCHHHHHHhcC---CCCCCceeeccCCCCCCCeEEEEEEEEEecCCCCCccCCccchhhhccCCCCCceEEEEeecCC--
Q 014605 184 MPIDWLVQLVP---PLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIPAWFQKGS-- 258 (421)
Q Consensus 184 ~p~~~ll~~lp---~~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~~~~~~G~~S~~L~~l~~~~G~~v~i~~~~g~-- 258 (421)
.|+|++...++ ...+|+|||+|++.. ++.++|+|+++....+.+....|.+|+||+++++ |+.|.+.+|.|.
T Consensus 44 ~pGQ~v~l~~~~~g~~~~R~ySi~s~~~~-~~~~~l~vk~~~~~~~~~~~~~G~~s~~l~~l~~--Gd~v~v~gP~G~~~ 120 (270)
T 2cnd_A 44 PIGKHIFVCATIEGKLCMRAYTPTSMVDE-IGHFDLLVKVYFKNEHPKFPNGGLMTQYLDSLPV--GSYIDVKGPLGHVE 120 (270)
T ss_dssp CTTCEEEEEEEETTEEEEEEECCCSCTTC-CSEEEEEEECCCSSCBTTBTTCCHHHHHHHHCCT--TCEEEEEEEECSEE
T ss_pred CCCCEEEEEeeeCCcEEEEeeccCCCccC-CCEEEEEEEEeccCcccccCCCCchhhHHhcCCC--CCEEEEECCcccce
Confidence 57887665554 246799999999853 5899999976532211111236999999999999 999999999986
Q ss_pred ------CCCCC---CCCCeEEEeCCCcchhHHHHHHHHHHhcCCCCCCCEEEEEcccCCCccccHHHHHHhhhcCC-Ccc
Q 014605 259 ------LPRPP---PSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFLYRELWLSHSLNDG-VFS 328 (421)
Q Consensus 259 ------F~lp~---~~~piimIa~GTGIAPf~s~l~~~~~~~~~~~~~~~~L~~G~R~~~d~ly~del~~~~~~~g-~l~ 328 (421)
|.++. ...+++|||+|||||||+++++++...... ...+++|+||+|+.+|++|.+||+++.+.++ ++
T Consensus 121 ~~~~g~f~l~~~~~~~~~~vliagGtGiaP~~~~l~~l~~~~~~-~~~~v~l~~~~r~~~d~~~~~el~~l~~~~~~~~- 198 (270)
T 2cnd_A 121 YTGRGSFVINGKQRNARRLAMICGGSGITPMYQIIQAVLRDQPE-DHTEMHLVYANRTEDDILLRDELDRWAAEYPDRL- 198 (270)
T ss_dssp CCSSSCEEETTEEECCSEEEEEEEGGGHHHHHHHHHHHHHTTTT-CCCEEEEEEEESCGGGCTTHHHHHHHHHHCTTTE-
T ss_pred eccccceeccCCcccCCEEEEEeccccHHHHHHHHHHHHhcCCC-CCcEEEEEEEcCCHHHcchHHHHHHHHHHCcCcE-
Confidence 55552 468999999999999999999999875210 1278999999999999999999999987644 57
Q ss_pred ccCCCcEEEEeccC---CC----CcccchhhHHHcHHHHHHHhc---CCCEEEEeCCCCccHHH-HHHHHHH
Q 014605 329 EAKGGGFYVAFSRK---QP----QKVYVQHKMLEQSQRIWNLLL---SKASIYVAGSATKMPSD-VWSTFEE 389 (421)
Q Consensus 329 ~~~~~~~~~a~Sr~---~~----~k~yVqd~l~~~~~~v~~~l~---~~~~iyVCG~~~~m~~~-V~~~L~~ 389 (421)
+++.++|++ ++ .++||++.+.+. .+. .++.+|+|||+ .|+++ +++.|.+
T Consensus 199 -----~~~~~~s~~~~~~~~~~~~~g~v~~~~l~~------~l~~~~~~~~vyvCGp~-~m~~~~~~~~L~~ 258 (270)
T 2cnd_A 199 -----KVWYVIDQVKRPEEGWKYSVGFVTEAVLRE------HVPEGGDDTLALACGPP-PMIQFAISPNLEK 258 (270)
T ss_dssp -----EEEEEESCCSCGGGCCCSEESSCCHHHHHH------HSCCCSSSEEEEEECCH-HHHHTTTHHHHHT
T ss_pred -----EEEEEECCCCCCCCCcccccccCCHHHHHH------hcCCCcCCEEEEEECCH-HHHHHHHHHHHHH
Confidence 888889873 11 367888754321 222 25689999998 89886 4666643
No 31
>1cqx_A Flavohemoprotein; globin fold, six-stranded antiparallel beta sheet, helix-FLA five-stranded parallel beta sheet, lipid binding protein; HET: HEM FAD DGG; 1.75A {Cupriavidus necator} SCOP: a.1.1.2 b.43.4.2 c.25.1.5 PDB: 3ozu_A* 3ozv_B* 3ozw_A*
Probab=99.92 E-value=2.1e-25 Score=226.00 Aligned_cols=181 Identities=18% Similarity=0.277 Sum_probs=143.7
Q ss_pred CCHHHHHHhcC--C---CCCCceeeccCCCCCCCeEEEEEEEEEecCCCCCccCCccchhhh-ccCCCCCceEEEEeecC
Q 014605 184 MPIDWLVQLVP--P---LKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLA-GLDPQQGIYIPAWFQKG 257 (421)
Q Consensus 184 ~p~~~ll~~lp--~---~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~~~~~~G~~S~~L~-~l~~~~G~~v~i~~~~g 257 (421)
.|||++...+| . ..+|+|||+|+|. ++.++|+|+.+.. ...+.|.+|+||+ ++++ ||.|.+.+|.|
T Consensus 186 ~pGQ~v~l~~~~~~~~~~~~R~YSi~s~p~--~~~~~i~Vk~~~~----~~~~~G~~S~~L~~~l~~--Gd~v~v~gP~G 257 (403)
T 1cqx_A 186 EPGQYTSVAIDVPALGLQQIRQYSLSDMPN--GRTYRISVKREGG----GPQPPGYVSNLLHDHVNV--GDQVKLAAPYG 257 (403)
T ss_dssp CTTCEEEEEEEETTTTEEEEEEEECCSCCC--SSCEEEEEECCCB----TTBCCCHHHHHHHHHCCT--TCEEEECCCBC
T ss_pred CCCCEEEEEEecCCCCcceeecceecCCCC--CCeEEEEEEECCC----CCCCCCeehHHHhhCCCC--CCEEEEecCcc
Confidence 58898877765 2 2479999999985 4789999964310 1123699999999 5999 99999999999
Q ss_pred CCCCC-CCCCCeEEEeCCCcchhHHHHHHHHHHhcCCCCCCCEEEEEcccCCCccccHHHHHHhhhcCCCccccCCCcEE
Q 014605 258 SLPRP-PPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFY 336 (421)
Q Consensus 258 ~F~lp-~~~~piimIa~GTGIAPf~s~l~~~~~~~~~~~~~~~~L~~G~R~~~d~ly~del~~~~~~~g~l~~~~~~~~~ 336 (421)
.|.++ +..+|++|||+|||||||+++++++.. ... .+++|+||+|+.+|++|++||+++.+.++++ +++
T Consensus 258 ~f~l~~~~~~~~vlIagGtGitP~~s~l~~l~~-~~~---~~v~l~~~~r~~~~~~~~~el~~l~~~~~~~------~~~ 327 (403)
T 1cqx_A 258 SFHIDVDAKTPIVLISGGVGLTPMVSMLKVALQ-APP---RQVVFVHGARNSAVHAMRDRLREAAKTYENL------DLF 327 (403)
T ss_dssp SCSCCTTCCSCEEEEESSCCHHHHHHHHHHHTC-SSC---CCEEEEEEESCSSSCHHHHHHHHHHHHCTTE------EEE
T ss_pred CcccCCCCCCCEEEEEecccHhhHHHHHHHHHh-CCC---CcEEEEEEeCChhhCcHHHHHHHHHHhCCCc------EEE
Confidence 99997 677899999999999999999999876 333 7899999999999999999999998766778 899
Q ss_pred EEeccCCCC---------cccchhh-HHHcHHHHHHHhcCCCEEEEeCCCCccHHHHHHHHHH
Q 014605 337 VAFSRKQPQ---------KVYVQHK-MLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEE 389 (421)
Q Consensus 337 ~a~Sr~~~~---------k~yVqd~-l~~~~~~v~~~l~~~~~iyVCG~~~~m~~~V~~~L~~ 389 (421)
+++|+++.. .++++.. +.+. + .+ .++.+|+|||+ .|+++|++.|.+
T Consensus 328 ~~~s~~~~~~~~~~~~~~~G~i~~~~l~~~---~--~~-~~~~vyvCGp~-~m~~~v~~~L~~ 383 (403)
T 1cqx_A 328 VFYDQPLPEDVQGRDYDYPGLVDVKQIEKS---I--LL-PDADYYICGPI-PFMRMQHDALKN 383 (403)
T ss_dssp EEESSCCTTCCBTTTBSEESSCCGGGSHHH---H--CC-TTCEEEEESSH-HHHHHHHHHHHH
T ss_pred EEECCCCcccccccccCcCCCcCHHHHhhc---c--CC-CCCEEEEeCCH-HHHHHHHHHHHH
Confidence 999986542 2344432 2211 0 12 27899999998 999999888764
No 32
>2pia_A Phthalate dioxygenase reductase; HET: FMN; 2.00A {Burkholderia cepacia} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=99.91 E-value=7.8e-25 Score=215.47 Aligned_cols=172 Identities=13% Similarity=0.200 Sum_probs=139.1
Q ss_pred CCHHHHHHhcCCCCCCceeeccCCCCCCCeEEEEEEEEEecCCCCCccCCc-cchhhh-ccCCCCCceEEEEeecCCCCC
Q 014605 184 MPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGL-CSVWLA-GLDPQQGIYIPAWFQKGSLPR 261 (421)
Q Consensus 184 ~p~~~ll~~lp~~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~~~~~~G~-~S~~L~-~l~~~~G~~v~i~~~~g~F~l 261 (421)
.|+|++...+|....|+|||+|+|.. ++.++|+|+ +...|. +|+||+ ++++ |+.|.+.+|.|.|.+
T Consensus 40 ~pGQ~v~l~~~~g~~R~ySi~s~~~~-~~~l~i~Vk---------~~~~G~g~S~~L~~~l~~--Gd~v~v~gP~g~f~l 107 (321)
T 2pia_A 40 EAGANLTVAVPNGSRRTYSLCNDSQE-RNRYVIAVK---------RDSNGRGGSISFIDDTSE--GDAVEVSLPRNEFPL 107 (321)
T ss_dssp CTTCEEEEECTTSCEEEEECCSCTTC-CSEEEEEEE---------CCTTSCSHHHHHHHSCCT--TCEEEECCCBCCSCC
T ss_pred CCCCEEEEECCCCCcEEEEeCCCCCC-CCeEEEEEE---------EecCCcchhHHHHhcCCC--CCEEEEeCCcccccc
Confidence 58998888888778999999999853 578999994 345688 999999 8999 999999999999998
Q ss_pred CCCCCCeEEEeCCCcchhHHHHHHHHHHhcCCCCCCCEEEEEcccCCCccccHHHHHHhhhcCCCccccCCCcEEEEecc
Q 014605 262 PPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSR 341 (421)
Q Consensus 262 p~~~~piimIa~GTGIAPf~s~l~~~~~~~~~~~~~~~~L~~G~R~~~d~ly~del~~~~~~~g~l~~~~~~~~~~a~Sr 341 (421)
+....+++|||+|||||||++|+++....+. .+++|+||+|+.+|++|.+||+++... . ++.+.+++
T Consensus 108 ~~~~~~~vliagG~GItP~~s~l~~l~~~~~----~~v~l~~~~r~~~~~~~~~el~~l~~~-~--------~~~~~~~~ 174 (321)
T 2pia_A 108 DKRAKSFILVAGGIGITPMLSMARQLRAEGL----RSFRLYYLTRDPEGTAFFDELTSDEWR-S--------DVKIHHDH 174 (321)
T ss_dssp CTTCSEEEEEEEGGGHHHHHHHHHHHHHHCS----SEEEEEEEESCGGGCTTHHHHHSTTTT-T--------TEEEEECT
T ss_pred CCCCCCEEEEEecccHhHHHHHHHHHHHcCC----CcEEEEEEECChhhhHHHHHHhcCccC-C--------eEEEEECC
Confidence 8447799999999999999999999987642 589999999999999999999988622 3 44455666
Q ss_pred CCC-CcccchhhHHHcHHHHHHHhcCCCEEEEeCCCCccHHHHHHHHHH
Q 014605 342 KQP-QKVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEE 389 (421)
Q Consensus 342 ~~~-~k~yVqd~l~~~~~~v~~~l~~~~~iyVCG~~~~m~~~V~~~L~~ 389 (421)
+.. .+.++++++.+ ...+..+|+|||+ .|+++|++.|.+
T Consensus 175 ~~~~g~~~~~~ll~~--------~~~~~~vyvCGP~-~m~~~v~~~l~~ 214 (321)
T 2pia_A 175 GDPTKAFDFWSVFEK--------SKPAQHVYCCGPQ-ALMDTVRDMTGH 214 (321)
T ss_dssp TCTTSCCCHHHHHSS--------CCTTEEEEEESCH-HHHHHHHHHTTT
T ss_pred CcccCccCHHHHhcc--------cCCCCEEEEECCH-HHHHHHHHHHHh
Confidence 432 24455544432 1247889999998 999999988876
No 33
>2gpj_A Siderophore-interacting protein; structural genomics, joint for structural genomics, JCSG; HET: FAD; 2.20A {Shewanella putrefaciens}
Probab=99.78 E-value=3.6e-20 Score=176.07 Aligned_cols=166 Identities=11% Similarity=0.050 Sum_probs=120.9
Q ss_pred CCCHHHHHHhcCC----CCCCceeeccCCCCCCCeEEEEEEEEEecCCCCCccC-CccchhhhccCCCCCceEEEEeecC
Q 014605 183 QMPIDWLVQLVPP----LKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRT-GLCSVWLAGLDPQQGIYIPAWFQKG 257 (421)
Q Consensus 183 ~~p~~~ll~~lp~----~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~~~~~~-G~~S~~L~~l~~~~G~~v~i~~~~g 257 (421)
..|+|++...+|. ...|+|||+|.+. +.++|.|.+ ... |.+|+||+++++ ||.|.+.+|.|
T Consensus 39 ~~pGQ~v~l~~~~~~~~~~~R~YSi~~~~~---~~~~i~~~~---------~~~~G~~S~~l~~l~~--Gd~l~v~gP~G 104 (252)
T 2gpj_A 39 DQESAYIKLLFPQAGERPLMRTYTIRQQRD---DEIDVDFVL---------HDTDGPASSWAKTAQV--GELIQIGGPGL 104 (252)
T ss_dssp CCTTCEEEEEECCTTSCCEEEEEECCEEET---TEEEEEEEC---------CSSCCHHHHHHHHCCT--TCEEEEEEEEC
T ss_pred CCCCCeEEEEcccCCCCCCCCceeeeccCC---CEEEEEEEE---------eCCCCcHHHHHhhCCC--CCEEEEecCCC
Confidence 4689988877774 4569999999763 677777732 233 899999999999 99999999999
Q ss_pred CCCCCCCCCCeEEEeCCCcchhHHHHHHHHHHhcCCCCCCCEEEEEcccCCCccccHHHHHHhhhcCCCccccCCCcEEE
Q 014605 258 SLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYV 337 (421)
Q Consensus 258 ~F~lp~~~~piimIa~GTGIAPf~s~l~~~~~~~~~~~~~~~~L~~G~R~~~d~ly~del~~~~~~~g~l~~~~~~~~~~ 337 (421)
.|.++....+++|||+||||||+++++++... . .++.+++++|+.+|..+ | ... +.+ +++.
T Consensus 105 ~f~l~~~~~~~lliagGtGitPi~s~l~~l~~---~---~~~~~~~~~~~~~d~~~---l---~~~-~~~------~v~~ 165 (252)
T 2gpj_A 105 KKLINFEADWFLLAGDMTALPAISVNLAKLPN---N---AVGYAVIEVLSEADIQP---L---VHP-EHV------ELHW 165 (252)
T ss_dssp CCCCCSSSSEEEEEEEGGGHHHHHHHHHHSCT---T---CEEEEEEEESSGGGCCC---C---CCC-TEE------EEEE
T ss_pred CCcCCCCCceEEEEcchhhHHHHHHHHHhCCC---C---CcEEEEEEECCHHHhhc---c---cCC-CCc------EEEE
Confidence 99987445799999999999999999998742 2 57789999999877543 1 111 345 6666
Q ss_pred EeccCCCC-cccchhhHHHcHHHHHHHh-cCCCEEEEeCCCCccHHHHHHHHH
Q 014605 338 AFSRKQPQ-KVYVQHKMLEQSQRIWNLL-LSKASIYVAGSATKMPSDVWSTFE 388 (421)
Q Consensus 338 a~Sr~~~~-k~yVqd~l~~~~~~v~~~l-~~~~~iyVCG~~~~m~~~V~~~L~ 388 (421)
+++.+... ...+.+.+.+. .+ ..+..+|+|||+ .|++++++.|.
T Consensus 166 ~~~~~~~~~g~~~~~~l~~~------~~~~~~~~vy~CGP~-~m~~av~~~l~ 211 (252)
T 2gpj_A 166 VINPEADPEGRPLVERIAQL------PWLAGEPAVWIACEF-NSMRALRRHFK 211 (252)
T ss_dssp EECSSCCTTCHHHHHHHTTS------CCCSSCEEEEEEEEH-HHHHHHHHHHH
T ss_pred EeCCCCCcccHHHHHHHHhc------cCCCCCcEEEEEcCH-HHHHHHHHHHH
Confidence 66554321 11222222211 01 125689999998 99999998887
No 34
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=99.75 E-value=7.3e-19 Score=155.42 Aligned_cols=126 Identities=10% Similarity=0.009 Sum_probs=85.2
Q ss_pred cCCCCCce-EEEEeecCCCCCCCCCCCeEEEeCCCcchhHHHHHHHHHHhcCCCCCCCEEEEEcccCCCccccHHHHHHh
Q 014605 242 LDPQQGIY-IPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFLYRELWLSH 320 (421)
Q Consensus 242 l~~~~G~~-v~i~~~~g~F~lp~~~~piimIa~GTGIAPf~s~l~~~~~~~~~~~~~~~~L~~G~R~~~d~ly~del~~~ 320 (421)
|++ ||. +.+.+|.|+|...+..++++|||+||||||+++++++....+ .+++|+ |+|+.+|.+|.+||+++
T Consensus 1 L~~--Gd~vl~v~gP~G~~f~~~~~~~~llIaGG~GItPl~sm~~~l~~~~-----~~v~l~-g~r~~~d~~~~~el~~l 72 (158)
T 3lrx_A 1 MKE--GDSLLNVAGPLGTPVPMEKFGKILAIGAYTGIVEVYPIAKAWQEIG-----NDVTTL-HVTFEPMVILKEELEKA 72 (158)
T ss_dssp -------------CCCCCCBCCCCCSEEEEEEETTHHHHHHHHHHHHHHHT-----CEEEEE-EECBGGGCCSHHHHHHH
T ss_pred CcC--CCEeeEEECCCCCCCccCCCCeEEEEEccCcHHHHHHHHHHHHhcC-----CcEEEE-EeCCHHHhhHHHHHHHH
Confidence 467 999 599999998654345679999999999999999999987653 579999 99999999999999998
Q ss_pred hhcCCCccccCCCcEEEEeccCCC--------CcccchhhHHHcHHHHHHHhcCCCEEEEeCCCCccHHHHHHHHHHH
Q 014605 321 SLNDGVFSEAKGGGFYVAFSRKQP--------QKVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEI 390 (421)
Q Consensus 321 ~~~~g~l~~~~~~~~~~a~Sr~~~--------~k~yVqd~l~~~~~~v~~~l~~~~~iyVCG~~~~m~~~V~~~L~~i 390 (421)
..+ + .+..+++++.. .+++|++.+.+... + .+...+|+|||+ .|.++|.+.+.+.
T Consensus 73 ~~~---~------~~~~v~~~~~~~~~~~~~g~~G~v~~~l~~~l~---~--~~~~~vy~CGP~-~mm~~v~~~l~~~ 135 (158)
T 3lrx_A 73 VTR---H------IVEPVPLNPNQDFLANMKNVSQRLKEKVRELLE---S--EDWDLVFMVGPV-GDQKQVFEVVKEY 135 (158)
T ss_dssp SSE---E------EECCBCCCTTSCHHHHHHHHHHHHHHHHHHHHH---H--SCCSEEEEESCH-HHHHHHHHHHGGG
T ss_pred Hhc---e------EEEEeeccccccCCCCCCCCcccccHHHHHhhc---c--CCCCEEEEECCH-HHHHHHHHHHHHc
Confidence 643 3 33333333211 24666665543211 1 136789999998 9999998877654
No 35
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=99.70 E-value=1.7e-17 Score=144.03 Aligned_cols=120 Identities=10% Similarity=-0.009 Sum_probs=86.2
Q ss_pred EEEEeecCCCCCCCCCCCeEEEeCCCcchhHHHHHHHHHHhcCCCCCCCEEEEEcccCCCccccHHHHHHhhhcCCCccc
Q 014605 250 IPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFLYRELWLSHSLNDGVFSE 329 (421)
Q Consensus 250 v~i~~~~g~F~lp~~~~piimIa~GTGIAPf~s~l~~~~~~~~~~~~~~~~L~~G~R~~~d~ly~del~~~~~~~g~l~~ 329 (421)
+.+.+|.|+|...+..++++|||+|+||||+++++++....+ .++.++ |+|+++|++|++||+++.++ +
T Consensus 3 ~~v~GP~G~~~~~~~~~~~llIaGG~GiaPl~sm~~~l~~~~-----~~v~l~-g~R~~~~~~~~~el~~l~~~---~-- 71 (142)
T 3lyu_A 3 LNVAGPLGTPVPMEKFGKILAIGAYTGIVEVYPIAKAWQEIG-----NDVTTL-HVTFEPMVILKEELEKAVTR---H-- 71 (142)
T ss_dssp ----CCCSCCBCCCCCSEEEEEEETTHHHHHHHHHHHHHHTT-----CEEEEE-EEEEGGGCCSHHHHHTTSSE---E--
T ss_pred eeeeCCCCCCccCCCCCeEEEEECcCcHHHHHHHHHHHHhcC-----CcEEEE-EeCCHHHhhHHHHHHHHHhh---e--
Confidence 467889998765544689999999999999999999987653 579999 99999999999999998644 3
Q ss_pred cCCCcEEEEeccCCC--------CcccchhhHHHcHHHHHHHhcCCCEEEEeCCCCccHHHHHHHHHHH
Q 014605 330 AKGGGFYVAFSRKQP--------QKVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEI 390 (421)
Q Consensus 330 ~~~~~~~~a~Sr~~~--------~k~yVqd~l~~~~~~v~~~l~~~~~iyVCG~~~~m~~~V~~~L~~i 390 (421)
.+..+++++.. .+++|++.+.+... . .+...+|+|||+ .|.++|.+.+++.
T Consensus 72 ----~~~~~~~~~~~~~~d~~~g~~G~v~~~l~~~~~----~-~~~~~vy~CGP~-~Mm~av~~~l~~~ 130 (142)
T 3lyu_A 72 ----IVEPVPLNPNQDFLANMKNVSQRLKEKVRELLE----S-EDWDLVFMVGPV-GDQKQVFEVVKEY 130 (142)
T ss_dssp ----EEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHH----S-SCCSEEEEESCH-HHHHHHHHHHHHH
T ss_pred ----EEEEeecccccCCCCCCCCCccchhHHHHHhcc----c-CCCCEEEEECCH-HHHHHHHHHHHHc
Confidence 44444444321 24566655443211 1 135689999998 9999998877764
No 36
>3a1f_A Cytochrome B-245 heavy chain; GP91(PHOX), NADPH binding domain, oxidoreductase; 2.00A {Homo sapiens}
Probab=99.69 E-value=6.4e-18 Score=151.88 Aligned_cols=133 Identities=14% Similarity=0.226 Sum_probs=91.3
Q ss_pred EEeecCCCCCC-CCCCCeEEEeCCCcchhHHHHHHHHHHhcC----CCCCCCEEEEEcccCCCccc-cHHHHHHhhhcC-
Q 014605 252 AWFQKGSLPRP-PPSVPLILIGPGTGCAPFRGFVEERAIQSS----SGPAAPIIFFFGCRNEDDFL-YRELWLSHSLND- 324 (421)
Q Consensus 252 i~~~~g~F~lp-~~~~piimIa~GTGIAPf~s~l~~~~~~~~----~~~~~~~~L~~G~R~~~d~l-y~del~~~~~~~- 324 (421)
|.+|.|.|.++ ....++||||+|||||||+++++++..... .....+++|+||+|+.++++ |.+||+++.+.+
T Consensus 3 v~GP~G~~~~~~~~~~~~vlIagG~GItP~~s~l~~l~~~~~~~~~~~~~~~v~l~~~~r~~~~~~w~~~~l~~l~~~~~ 82 (186)
T 3a1f_A 3 VDGPFGTASEDVFSYEVVMLVGAGIGVTPFASILKSVWYKYCNNATNLKLKKIYFYWLCRDTHAFEWFADLLQLLESQMQ 82 (186)
T ss_dssp TTSTTSHHHHHHTTSSEEEEEEEGGGHHHHHHHHHHHHHHHHHCTTCCCCCEEEEEEEESCTTTTHHHHHHHHHHHHHHH
T ss_pred EECCCCCCccChhhCCeEEEEecCccHHHHHHHHHHHHHHHhhcccCCCCcEEEEEEEECCcchHHHHHHHHHHHHHHHh
Confidence 45678887765 556799999999999999999999887531 00137899999999999988 999999997642
Q ss_pred -----CCccccCCCcEEEEeccCCC---Ccccchh-----hHH----------Hc----HHHHHHHhc-CCCEEEEeCCC
Q 014605 325 -----GVFSEAKGGGFYVAFSRKQP---QKVYVQH-----KML----------EQ----SQRIWNLLL-SKASIYVAGSA 376 (421)
Q Consensus 325 -----g~l~~~~~~~~~~a~Sr~~~---~k~yVqd-----~l~----------~~----~~~v~~~l~-~~~~iyVCG~~ 376 (421)
+++ ++.+.+|++.. .+.|++. .+. -. .+.+.+... .+..||+|||+
T Consensus 83 ~~~~~~~~------~~~~~~t~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~gR~~~~~~~~~~~~~~~~~~~~v~~CGP~ 156 (186)
T 3a1f_A 83 ERNNAGFL------SYNIYLTGWDESQANHFAVHHDEEKDVITGLKQKTLYGRPNWDNEFKTIASQHPNTRIGVFLCGPE 156 (186)
T ss_dssp HTTCTTSE------EEEEEETTC-----------------------CCEEESCCCHHHHHHHHHHHSTTCEEEEEEESCH
T ss_pred hccCCCeE------EEEEEEcCCCCCcccceeeccccccccCCCCccccccCCCCHHHHHHHHHHhCCCCcEEEEEeCCH
Confidence 367 88899998632 1122221 000 00 111222222 25789999998
Q ss_pred CccHHHHHHHHHHHH
Q 014605 377 TKMPSDVWSTFEEIV 391 (421)
Q Consensus 377 ~~m~~~V~~~L~~i~ 391 (421)
.|+++|++++.+..
T Consensus 157 -~m~~~v~~~l~~~g 170 (186)
T 3a1f_A 157 -ALAETLSKQSISNS 170 (186)
T ss_dssp -HHHHHHHHHHHHTC
T ss_pred -HHHHHHHHHHHHhh
Confidence 99999998887754
No 37
>3vo2_A Putative uncharacterized protein; rossmann fold, oxidoreductase, FAD binding; HET: FAD; 1.39A {Zea mays} PDB: 3vo1_A* 1gaw_A* 1gaq_A* 1qg0_A* 4af6_A* 1qga_A* 1qfz_A* 1qfy_A* 4af7_A* 1sm4_A* 3mhp_A* 1fnb_A* 1fnc_A* 1fnd_A* 1bx1_A* 1frq_A* 1frn_A* 1bx0_A* 2xnc_A*
Probab=84.62 E-value=1.7 Score=41.25 Aligned_cols=44 Identities=18% Similarity=0.409 Sum_probs=38.4
Q ss_pred ee-eEEEeeeecCCCCCCcEEEEEEEecCCCcccCCCCEEEEccCC
Q 014605 24 FL-KMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQ 68 (421)
Q Consensus 24 ~~-~v~~~~~lt~~~~~~~v~~i~l~~~~~~~~y~~GD~l~v~p~N 68 (421)
|. +|++++.+++.+...++++|+|+.+ ..+.|+||.++.|.++.
T Consensus 34 ~~~~V~~~~~l~~~~~~~~v~~l~l~~~-~~~~~~pGQ~v~l~~~~ 78 (310)
T 3vo2_A 34 YVGRCLSNTRITGDDAPGETWHMVFSTE-GEIPYREGQSIGIIADG 78 (310)
T ss_dssp EEEEEEEEEECSCSSSSSCEEEEEEECT-TCCCCCTTCEEEEECSS
T ss_pred EEEEEEEEEEccCCCCCccEEEEEEeCC-CCCcccCCCEEEEECCC
Confidence 55 9999999998877788999999976 56789999999998764
No 38
>3lo8_A Ferredoxin--NADP reductase; electron transport, oxidoreductase, FAD, flavoprotein; HET: FAD; 1.05A {Zea mays} PDB: 3lvb_A* 1jb9_A*
Probab=70.35 E-value=9.8 Score=35.68 Aligned_cols=45 Identities=13% Similarity=0.288 Sum_probs=38.0
Q ss_pred cee-eEEEeeeecCCCCCCcEEEEEEEecCCCcccCCCCEEEEccCC
Q 014605 23 CFL-KMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQ 68 (421)
Q Consensus 23 ~~~-~v~~~~~lt~~~~~~~v~~i~l~~~~~~~~y~~GD~l~v~p~N 68 (421)
.+. +|++++.+++++...++++++|..+ ....|+||.++.|..+.
T Consensus 28 ~~~~~V~~~~~~t~~~~~~~v~~~~l~~~-~~~~~~pGQ~v~l~~~~ 73 (311)
T 3lo8_A 28 PFTATIVSVESLVGPKAPGETCHIVIDHG-GNVPYWEGQSYGVIPPG 73 (311)
T ss_dssp CEEEEEEEEEECSCTTSSSCEEEEEEECT-TSSCCCTTCEEEEECSS
T ss_pred CeEEEEEeeEeccCCCCCCccEEEEEeCC-CCCcccCCCEEEEeCCC
Confidence 355 9999999997666679999999987 46899999999998764
No 39
>2r6h_A NADH:ubiquinone oxidoreductase, Na translocating, subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2; HET: FAD; 2.95A {Porphyromonas gingivalis}
Probab=47.91 E-value=29 Score=31.79 Aligned_cols=44 Identities=9% Similarity=0.244 Sum_probs=34.2
Q ss_pred cCccee-eEEEeeeecCCCCCCcEEEEEEEecC-CCcccCCCCEEEEccCC
Q 014605 20 KAVCFL-KMIKNQPLTKSGSGKDVHHFEFEFVS-AAIEYEVGDVLEILPSQ 68 (421)
Q Consensus 20 ~~~~~~-~v~~~~~lt~~~~~~~v~~i~l~~~~-~~~~y~~GD~l~v~p~N 68 (421)
.+..+. +|++++.+++ +++.++|..++ ..+.|+||.++.|..+.
T Consensus 6 ~~~~~~~~V~~~~~~t~-----~~~~l~l~~~~~~~~~~~pGQ~v~l~~p~ 51 (290)
T 2r6h_A 6 GVKEWECEVLSNKNVST-----FIKEFVVKLPEGETMNFKSGSYAQIKIPK 51 (290)
T ss_dssp CCCEEEEEEEEEEESSS-----SEEEEEEECSTTCCCCCCTTCEEEEEECS
T ss_pred cceEEEEEEEEeeecCC-----CeEEEEEEcCCCCccccCCCceEEEEccc
Confidence 344455 8999999884 68999999873 35789999999997554
No 40
>1w78_A FOLC bifunctional protein; DHFS, dihydrofolate synthase, synthase, ATP-binding, folate biosynthesis, ligase, multifunctional enzyme; HET: KCX PD8 ADP; 1.82A {Escherichia coli} PDB: 1w7k_A*
Probab=45.06 E-value=2e+02 Score=27.84 Aligned_cols=108 Identities=9% Similarity=0.102 Sum_probs=56.4
Q ss_pred CeEEEeCCCcchhHHHHHHHHHHhcCCCCCCCEEEEEcccCCCccccHHHHHHhhhcCCCccccCCCcEEEEeccCCCC-
Q 014605 267 PLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQPQ- 345 (421)
Q Consensus 267 piimIa~GTGIAPf~s~l~~~~~~~~~~~~~~~~L~~G~R~~~d~ly~del~~~~~~~g~l~~~~~~~~~~a~Sr~~~~- 345 (421)
+.+++=.+.=-.-+.+.++........ +++++++|+....|+ ++.+..+.+ .+. .++ ++..+..+
T Consensus 297 ~~~i~D~Ahnp~s~~~~l~~l~~~~~~---~~~i~V~g~~~~kd~--~~~~~~l~~---~~d-----~vi-~~~~~~~r~ 362 (422)
T 1w78_A 297 PRVIFDVAHNPHAAEYLTGRMKALPKN---GRVLAVIGMLHDKDI--AGTLAWLKS---VVD-----DWY-CAPLEGPRG 362 (422)
T ss_dssp TEEEEECCCSHHHHHHHHHHHHHSCSC---SCEEEEECCBTTSCH--HHHHHHHHT---TCS-----EEE-ECCCCSSSB
T ss_pred CeEEEECCCCHHHHHHHHHHHHHhCCC---CCEEEEEeccCCCCH--HHHHHHHHh---hCC-----EEE-EECCCCCCC
Confidence 556666666566677777766543222 689999998554464 444444432 242 333 33222111
Q ss_pred -----------cccchhhHHHcHHHHHHHhcCCCEEEEeCCCCccHHHHHHHHHH
Q 014605 346 -----------KVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEE 389 (421)
Q Consensus 346 -----------k~yVqd~l~~~~~~v~~~l~~~~~iyVCG~~~~m~~~V~~~L~~ 389 (421)
+..+.+-+.+..+.+.+....+..|.+||+- .|..++++.|.+
T Consensus 363 ~~~~~l~~~~~~~~~~~~~~~ai~~a~~~~~~~d~vLv~GS~-~~~~~~~~~l~~ 416 (422)
T 1w78_A 363 ATAEQLLEHLGNGKSFDSVAQAWDAAMADAKAEDTVLVCGSF-HTVAHVMEVIDA 416 (422)
T ss_dssp CCHHHHHHHHSSCEECSSHHHHHHHHHHHCCTTCEEEEESSH-HHHHHHHHHHHH
T ss_pred CCHHHHHHHHhhcccCCCHHHHHHHHHHhcCCCCEEEEEeeH-HHHHHHHHHHHh
Confidence 0001111112222233334458899999996 777777766544
No 41
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=43.77 E-value=18 Score=34.69 Aligned_cols=27 Identities=19% Similarity=0.282 Sum_probs=22.1
Q ss_pred CCCeEEEeCCCc--chhHHHHHHHHHHhc
Q 014605 265 SVPLILIGPGTG--CAPFRGFVEERAIQS 291 (421)
Q Consensus 265 ~~piimIa~GTG--IAPf~s~l~~~~~~~ 291 (421)
.+.|++.|+||| |-|.+++.++...++
T Consensus 2 ~~~i~i~~GGTgGHi~palala~~L~~~g 30 (365)
T 3s2u_A 2 KGNVLIMAGGTGGHVFPALACAREFQARG 30 (365)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHHHHHTT
T ss_pred CCcEEEEcCCCHHHHHHHHHHHHHHHhCC
Confidence 356888999997 889999999988764
No 42
>3nrs_A Dihydrofolate:folylpolyglutamate synthetase; structural genomics, center for structural genomics of infec diseases, csgid; HET: TLA MES; 1.80A {Yersinia pestis} PDB: 3n2a_A* 3pyz_A* 3qcz_A*
Probab=43.26 E-value=1.4e+02 Score=29.18 Aligned_cols=106 Identities=14% Similarity=0.139 Sum_probs=56.8
Q ss_pred CCeEEEeCCCcchhHHHHHHHHH------HhcCCCCCCCEEEEEcccCCCccccHHHHHHhhhcCCCccccCCCcEEEEe
Q 014605 266 VPLILIGPGTGCAPFRGFVEERA------IQSSSGPAAPIIFFFGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAF 339 (421)
Q Consensus 266 ~piimIa~GTGIAPf~s~l~~~~------~~~~~~~~~~~~L~~G~R~~~d~ly~del~~~~~~~g~l~~~~~~~~~~a~ 339 (421)
.|.+++=.+.=-.-+.++++... ..... ++++++||+-...|+ ++-++.+.. .++ .++ +.
T Consensus 311 ~~~vi~D~AHNp~a~~all~~l~~~~~~~~~~~~---~r~i~V~G~~~dkd~--~~~~~~l~~---~~~-----~v~-~~ 376 (437)
T 3nrs_A 311 QPLLILDVAHNPHAARYLVNRLAQVINPVNASKQ---GKVRAVVGMLSDKDI--AGTLACLSE---RVD-----EWY-CA 376 (437)
T ss_dssp TTEEEECCCCSHHHHHHHHHHHHHTC-----------CCEEEEECCBTTBCH--HHHHHHHTT---TCC-----EEE-EC
T ss_pred CCeEEEECCCCHHHHHHHHHHHHhhcchhhhcCC---CCEEEEEeCCCCCCH--HHHHHHHHh---cCC-----EEE-Ee
Confidence 36677776666666777777665 32122 689999998765564 555555543 242 333 33
Q ss_pred ccCCCC------------c-ccchhhHHHcHHHHHHHhcCCCEEEEeCCCCccHHHHHHHH
Q 014605 340 SRKQPQ------------K-VYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTF 387 (421)
Q Consensus 340 Sr~~~~------------k-~yVqd~l~~~~~~v~~~l~~~~~iyVCG~~~~m~~~V~~~L 387 (421)
.-+..+ . .++.+ +.+..+.+.+....+..|.||||- -|+.++++.+
T Consensus 377 ~~~~~r~~~~~~l~~~~~~~~~~~d-~~~Ai~~a~~~a~~~D~VLv~GS~-~~v~~~~~~~ 435 (437)
T 3nrs_A 377 PLEGPRGASAGQLAEHLVSARQFSD-VETAWRQAMQDADTQDVVIVCGSF-HTVAHVMAAL 435 (437)
T ss_dssp CCSSTTBCCHHHHHTTCSSCEECSS-HHHHHHHHHHHCCTTCEEEEESSH-HHHHHHHHHT
T ss_pred CCCCCCCCCHHHHHHHHhhCCCcCC-HHHHHHHHHHhcCCCCeEEEEehH-HHHHHHHHHh
Confidence 322211 0 11111 122222333334458899999997 7777776544
No 43
>2eix_A NADH-cytochrome B5 reductase; flavoprotein, FAD-binding domain, NADH-binding, oxidoreducta; HET: FAD; 1.56A {Physarum polycephalum}
Probab=40.52 E-value=45 Score=29.52 Aligned_cols=44 Identities=9% Similarity=0.251 Sum_probs=33.9
Q ss_pred CcCccee--eEEEeeeecCCCCCCcEEEEEEEecC--CCcccCCCCEEEEccC
Q 014605 19 NKAVCFL--KMIKNQPLTKSGSGKDVHHFEFEFVS--AAIEYEVGDVLEILPS 67 (421)
Q Consensus 19 ~~~~~~~--~v~~~~~lt~~~~~~~v~~i~l~~~~--~~~~y~~GD~l~v~p~ 67 (421)
++|..|. +|++++.+++ +++.++|.+++ ....|+||.++.|..+
T Consensus 6 l~~~~~~~~~v~~~~~~t~-----~~~~~~l~~~~~~~~~~~~pGq~v~l~~~ 53 (243)
T 2eix_A 6 LNPNEYKKFMLREKQIINH-----NTRLFRFNLHHPEDVVGLPIGQHMSVKAT 53 (243)
T ss_dssp CCSSSCEEEEEEEEEEEET-----TEEEEEEECSSTTCCCCCCTTCEEEEEEE
T ss_pred CCCCceEEEEEEEEEEeCC-----CeEEEEEEcCCCCcccCcCCceEEEEEEe
Confidence 4455555 9999999984 67889998873 2468999999999765
No 44
>2lnb_A Z-DNA-binding protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, immune system; NMR {Homo sapiens}
Probab=36.84 E-value=68 Score=23.90 Aligned_cols=27 Identities=15% Similarity=0.181 Sum_probs=22.4
Q ss_pred HHhCCCCHHHHHHHHHHHHHCCCEEEe
Q 014605 392 SKEGEASRDSAANWLKALQRAGRYHVE 418 (421)
Q Consensus 392 ~~~~~~~~~~a~~~l~~l~~~~Ry~~d 418 (421)
++..|++..+..+.+++|+++|+.+..
T Consensus 41 ae~~GvdKKeVdKaik~LKkEgkI~SP 67 (80)
T 2lnb_A 41 VKECQAPKRELNQVLYRMKKELKVSLT 67 (80)
T ss_dssp HHHHTSCHHHHHHHHHHHHHTTSEEEE
T ss_pred HHHHCCCHHHHHHHHHHHHHcCCccCC
Confidence 345678999999999999999997643
No 45
>2pia_A Phthalate dioxygenase reductase; HET: FMN; 2.00A {Burkholderia cepacia} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=35.00 E-value=61 Score=30.32 Aligned_cols=38 Identities=18% Similarity=0.369 Sum_probs=31.1
Q ss_pred eEEEeeeecCCCCCCcEEEEEEEecCC-C-cccCCCCEEEEccCC
Q 014605 26 KMIKNQPLTKSGSGKDVHHFEFEFVSA-A-IEYEVGDVLEILPSQ 68 (421)
Q Consensus 26 ~v~~~~~lt~~~~~~~v~~i~l~~~~~-~-~~y~~GD~l~v~p~N 68 (421)
+|++++.+++ +++.++|..++. . ..|+||.++.|..++
T Consensus 12 ~V~~~~~~t~-----~~~~l~l~~~~~~~~~~~~pGQ~v~l~~~~ 51 (321)
T 2pia_A 12 KIASKEKIAR-----DIWSFELTDPQGAPLPPFEAGANLTVAVPN 51 (321)
T ss_dssp EEEEEEEEET-----TEEEEEEECTTCCCCCCCCTTCEEEEECTT
T ss_pred EEEEEEEcCC-----CEEEEEEEcCCCCcCCCCCCCCEEEEECCC
Confidence 8999999983 689999998743 2 389999999998764
No 46
>1umk_A B5R, NADH-cytochrome B5 reductase; flavoprotein, beta barrel, FAD-binding domain, NADH-binding domain, oxidoreductase; HET: FAD; 1.75A {Homo sapiens} SCOP: b.43.4.2 c.25.1.1 PDB: 1ndh_A* 1i7p_A* 1ib0_A* 1qx4_A*
Probab=34.89 E-value=62 Score=29.27 Aligned_cols=37 Identities=19% Similarity=0.432 Sum_probs=30.2
Q ss_pred eEEEeeeecCCCCCCcEEEEEEEecCC--CcccCCCCEEEEccC
Q 014605 26 KMIKNQPLTKSGSGKDVHHFEFEFVSA--AIEYEVGDVLEILPS 67 (421)
Q Consensus 26 ~v~~~~~lt~~~~~~~v~~i~l~~~~~--~~~y~~GD~l~v~p~ 67 (421)
+|++++.+++ +++.++|.+++. ...|+||.++.|..+
T Consensus 20 ~V~~~~~~~~-----~~~~~~l~~~~~~~~~~~~pGQ~v~l~~~ 58 (275)
T 1umk_A 20 RLIDREIISH-----DTRRFRFALPSPQHILGLPVGQHIYLSAR 58 (275)
T ss_dssp EEEEEEECSS-----SEEEEEEECSSTTCBCCCCTTCEEEEEEE
T ss_pred EEEEEEEcCC-----CeEEEEEEcCCcccccCCCCCcEEEEEEe
Confidence 8999999873 788999998742 468999999999754
No 47
>1ep3_B Dihydroorotate dehydrogenase B (PYRK subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: b.43.4.2 c.25.1.3 PDB: 1ep1_B* 1ep2_B*
Probab=34.26 E-value=43 Score=30.30 Aligned_cols=39 Identities=5% Similarity=0.078 Sum_probs=31.6
Q ss_pred eEEEeeeecCCCCCCcEEEEEEEecCCCcccCCCCEEEEccCCC
Q 014605 26 KMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQD 69 (421)
Q Consensus 26 ~v~~~~~lt~~~~~~~v~~i~l~~~~~~~~y~~GD~l~v~p~N~ 69 (421)
+|++++.+++ +++.++|+.++....|+||.++.|..++.
T Consensus 9 ~V~~~~~~t~-----~~~~l~l~~~~~~~~~~pGQ~v~l~~~~~ 47 (262)
T 1ep3_B 9 TVVSQREVAY-----NIFEMVLKGTLVDEMDLPGQFLHLAVPNG 47 (262)
T ss_dssp EEEEEEEEET-----TEEEEEEESGGGGGCCSTTCEEEECCSCT
T ss_pred EEEEEEEecC-----CEEEEEEEcCcccccCCCCceEEEEcCCC
Confidence 8999999983 68899999773346899999999987653
No 48
>1tvc_A Methane monooxygenase component C, methane monooxygenase; FAD-binding, NADH-binding, oxidoreductase; HET: FDA; NMR {Methylococcus capsulatus} SCOP: b.43.4.2 c.25.1.2
Probab=33.63 E-value=38 Score=30.31 Aligned_cols=44 Identities=9% Similarity=0.238 Sum_probs=33.8
Q ss_pred cCccee-eEEEeeeecCCCCCCcEEEEEEEe-c-CC---CcccCCCCEEEEccCC
Q 014605 20 KAVCFL-KMIKNQPLTKSGSGKDVHHFEFEF-V-SA---AIEYEVGDVLEILPSQ 68 (421)
Q Consensus 20 ~~~~~~-~v~~~~~lt~~~~~~~v~~i~l~~-~-~~---~~~y~~GD~l~v~p~N 68 (421)
.|..+. +|++++.+++ +++.++|.. + +. ...|+||.++.|..++
T Consensus 7 ~~~~~~~~V~~~~~~~~-----~~~~l~l~~~~~~~~~~~~~~~pGQ~v~l~~~~ 56 (250)
T 1tvc_A 7 EVGSFEAEVVGLNWVSS-----NTVQFLLQKRPDECGNRGVKFEPGQFMDLTIPG 56 (250)
T ss_dssp CSSEEEEEBCCCEEEET-----TEEEEEECSSTTSSSSSCCSCCSCCEEEECTTS
T ss_pred CcceEEEEEEEEEEcCC-----CeEEEEEEecCCCCcccccCcCCCcEEEEEeCC
Confidence 344455 8899999873 688999987 5 43 5789999999998654
No 49
>1qfj_A Protein (flavin reductase); riboflavin, ferredoxin reductase superfami oxidoreductase; 2.20A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1
Probab=32.63 E-value=59 Score=28.47 Aligned_cols=37 Identities=19% Similarity=0.266 Sum_probs=30.4
Q ss_pred eEEEeeeecCCCCCCcEEEEEEEecCCCcccCCCCEEEEccCC
Q 014605 26 KMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQ 68 (421)
Q Consensus 26 ~v~~~~~lt~~~~~~~v~~i~l~~~~~~~~y~~GD~l~v~p~N 68 (421)
+|++++.+++ +++.++|..+ ....|+||.++.|..++
T Consensus 6 ~V~~~~~~~~-----~~~~l~l~~~-~~~~~~pGq~v~l~~~~ 42 (232)
T 1qfj_A 6 KVTSVEAITD-----TVYRVRIVPD-AAFSFRAGQYLMVVMDE 42 (232)
T ss_dssp EEEEEEESSS-----SCEEEEEEES-SCCCCCTTCEEEEESSS
T ss_pred EEEEEEecCC-----CEEEEEEecC-CCCCcCCCCEEEEECCC
Confidence 7888888873 6789999876 46799999999998653
No 50
>4eh1_A Flavohemoprotein; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: FAD; 2.20A {Vibrio cholerae o1 biovar el tor}
Probab=31.72 E-value=85 Score=27.59 Aligned_cols=38 Identities=16% Similarity=0.210 Sum_probs=30.7
Q ss_pred eEEEeeeecCCCCCCcEEEEEEEecCC--CcccCCCCEEEEccCC
Q 014605 26 KMIKNQPLTKSGSGKDVHHFEFEFVSA--AIEYEVGDVLEILPSQ 68 (421)
Q Consensus 26 ~v~~~~~lt~~~~~~~v~~i~l~~~~~--~~~y~~GD~l~v~p~N 68 (421)
+|++++.++ .+++.++|..++. ...|+||.++.|..+.
T Consensus 7 ~V~~~~~~~-----~~~~~~~l~~~~~~~~~~~~pGq~v~l~~~~ 46 (243)
T 4eh1_A 7 VVREKQVES-----AYVTSFVLVPADGGAVLDYQPGQYIGIEVTP 46 (243)
T ss_dssp EEEEEEECS-----SSEEEEEEEESSCSCCCCCCTTCEEEEEECC
T ss_pred EEEEEEEcC-----CCeEEEEEEeCCCCcCCCcCCCCEEEEEEec
Confidence 788888887 4789999998732 3789999999998664
No 51
>1krh_A Benzoate 1,2-dioxygenase reductase; alpha-beta, FAD-binding, ferredoxin, NADH-binding, oxidoreductase; HET: FAD; 1.50A {Acinetobacter SP} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=29.75 E-value=78 Score=29.69 Aligned_cols=38 Identities=11% Similarity=0.303 Sum_probs=31.5
Q ss_pred eEEEeeeecCCCCCCcEEEEEEEecCC--CcccCCCCEEEEccCC
Q 014605 26 KMIKNQPLTKSGSGKDVHHFEFEFVSA--AIEYEVGDVLEILPSQ 68 (421)
Q Consensus 26 ~v~~~~~lt~~~~~~~v~~i~l~~~~~--~~~y~~GD~l~v~p~N 68 (421)
+|++++.++ .+++.++|..++. ...|+||.++.|..++
T Consensus 112 ~V~~~~~~~-----~~~~~l~l~~~~~~~~~~~~pGQ~v~l~~~~ 151 (338)
T 1krh_A 112 TLARVENLS-----DSTITFDIQLDDGQPDIHFLAGQYVNVTLPG 151 (338)
T ss_dssp EEEEEEESS-----SSEEEEEEEECTTCCCCCCCTTCEEEEECTT
T ss_pred EEEEEEEcC-----CCEEEEEEEeCCCCCCCCcCCCCeEEEEcCC
Confidence 888888888 3789999998743 5889999999998654
No 52
>2bgi_A Ferredoxin-NADP(H) reductase; ferredoxin(flavodoxin)-NADP(H) reductase, flavoproteins, electron transfer, oxidoreductase; HET: FAD HTG; 1.68A {Rhodobacter capsulatus} PDB: 2bgj_A* 2vnh_A* 2vni_A* 2vnj_A* 2vnk_A*
Probab=26.05 E-value=80 Score=28.56 Aligned_cols=36 Identities=11% Similarity=0.170 Sum_probs=30.3
Q ss_pred eEEEeeeecCCCCCCcEEEEEEEecCCCcccCCCCEEEEccC
Q 014605 26 KMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPS 67 (421)
Q Consensus 26 ~v~~~~~lt~~~~~~~v~~i~l~~~~~~~~y~~GD~l~v~p~ 67 (421)
+|++++.+++ +++.++|..+ ....|+||.++.|..+
T Consensus 20 ~V~~~~~~~~-----~~~~l~l~~~-~~~~~~pGQ~v~l~~~ 55 (272)
T 2bgi_A 20 TVTSVRHWTD-----TLFSFRVTRP-QTLRFRSGEFVMIGLL 55 (272)
T ss_dssp EEEEEEEEET-----TEEEEEEECC-TTCCCCTTCEEEEEEE
T ss_pred EEEEEEEcCC-----CEEEEEEeCC-CCCccCCCCEEEEEec
Confidence 8999999984 6889999876 4578999999999765
No 53
>4fk8_A Ferredoxin--NADP reductase; ssgcid, NIH, niaid, structural genomics, national institute allergy and infectious diseases; HET: FAD; 2.10A {Burkholderia thailandensis} PDB: 4f7d_A*
Probab=25.61 E-value=72 Score=28.76 Aligned_cols=36 Identities=11% Similarity=0.170 Sum_probs=30.4
Q ss_pred eEEEeeeecCCCCCCcEEEEEEEecCCCcccCCCCEEEEccC
Q 014605 26 KMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPS 67 (421)
Q Consensus 26 ~v~~~~~lt~~~~~~~v~~i~l~~~~~~~~y~~GD~l~v~p~ 67 (421)
+|++++.+++ +++.++|..+ ....|+||.++.|..+
T Consensus 23 ~V~~~~~~~~-----~~~~~~l~~~-~~~~~~pGQ~v~l~~~ 58 (271)
T 4fk8_A 23 TVLSVHHWTD-----TLFSFTCTRD-QALRFNNGEFTMVGLE 58 (271)
T ss_dssp EEEEEEEEET-----TEEEEEECCC-TTCCCCTTCEEEEEEE
T ss_pred EEEEEEEcCC-----CEEEEEEEcC-CCCCcCCCCEEEEEcc
Confidence 8999999984 6888999876 5689999999999765
No 54
>3h9d_A ATG8, microtubule-associated protein 1A/1B, light chain putative; autophagy, lipidation, ubiquitin-like, S protein; 2.30A {Trypanosoma brucei} SCOP: d.15.1.0
Probab=25.21 E-value=2.6e+02 Score=22.32 Aligned_cols=86 Identities=9% Similarity=0.075 Sum_probs=59.5
Q ss_pred CceEEEEe-ecCCCCCCCCCCCeEEEeCCCcchhHHHHHHHHHHhcCCCCCCCEEEEEcccCCC-ccccHHHHHHhhhcC
Q 014605 247 GIYIPAWF-QKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNED-DFLYRELWLSHSLND 324 (421)
Q Consensus 247 G~~v~i~~-~~g~F~lp~~~~piimIa~GTGIAPf~s~l~~~~~~~~~~~~~~~~L~~G~R~~~-d~ly~del~~~~~~~ 324 (421)
.+.|+|-+ +.+.=.+|..++.-.+|-...=++-|..+|+.+...... ..+.||.+..-+. |-...+-.+.+....
T Consensus 29 P~rIPVIvEr~~~~~~P~Ldk~KflVp~~~tv~qf~~~iRkrl~l~~~---~alFl~Vn~~~p~~~~~m~~lY~~~kd~D 105 (119)
T 3h9d_A 29 PDRLPIICEKVYNSDIGELDRCKFLVPSDLTVGQFVSVLRKRVQLEAE---SALFVYTNDTVLPSSAQMADIYSKYKDED 105 (119)
T ss_dssp TTEEEEEEEECTTSSCCCCSSCEEEEETTCBHHHHHHHHHHHHTCCTT---SCCEEEETTEECCTTSBHHHHHHHHCCTT
T ss_pred CCeEEEEEEecCCCCCCccCcceEEcCCCCCHHHHHHHHHHHhCCCcc---ceEEEEECCcCCCccchHHHHHHHcCCCC
Confidence 46677666 334444665566777899999999999999999876544 4577777766666 777777777775432
Q ss_pred CCccccCCCcEEEEeccCC
Q 014605 325 GVFSEAKGGGFYVAFSRKQ 343 (421)
Q Consensus 325 g~l~~~~~~~~~~a~Sr~~ 343 (421)
| -+++.||..+
T Consensus 106 G--------fLyv~Ys~e~ 116 (119)
T 3h9d_A 106 G--------FLYMKYSGEA 116 (119)
T ss_dssp S--------CEEEEEECC-
T ss_pred C--------eEEEEEeccc
Confidence 5 4677787643
No 55
>2qdx_A Ferredoxin reductase; oxidoreductase; HET: FAD; 1.55A {Pseudomonas aeruginosa} PDB: 3crz_A* 1a8p_A*
Probab=24.97 E-value=79 Score=28.24 Aligned_cols=37 Identities=8% Similarity=0.192 Sum_probs=30.5
Q ss_pred eEEEeeeecCCCCCCcEEEEEEEecCCCcccCCCCEEEEccCC
Q 014605 26 KMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQ 68 (421)
Q Consensus 26 ~v~~~~~lt~~~~~~~v~~i~l~~~~~~~~y~~GD~l~v~p~N 68 (421)
+|++++.+++ +++.++|..+ ....|+||.++.|..+.
T Consensus 7 ~V~~~~~~~~-----~~~~l~l~~~-~~~~~~pGq~v~l~~~~ 43 (257)
T 2qdx_A 7 RVLSVHHWND-----TLFSFKTTRN-PGLRFKTGQFVMIGLEV 43 (257)
T ss_dssp EEEEEEEEET-----TEEEEEEECC-TTCCCCTTCEEEEEEEE
T ss_pred EEEEEEEcCC-----CeEEEEEeCC-CCCccCCCCEEEEEecC
Confidence 8999999884 6889999876 45789999999997653
No 56
>1gvh_A Flavohemoprotein; oxidoreductase, NADP, heme, flavoprotein, FAD, iron transpor; HET: FAD HEM; 2.19A {Escherichia coli} SCOP: a.1.1.2 b.43.4.2 c.25.1.5
Probab=24.45 E-value=98 Score=29.70 Aligned_cols=37 Identities=24% Similarity=0.449 Sum_probs=30.6
Q ss_pred eEEEeeeecCCCCCCcEEEEEEEecCC--CcccCCCCEEEEccC
Q 014605 26 KMIKNQPLTKSGSGKDVHHFEFEFVSA--AIEYEVGDVLEILPS 67 (421)
Q Consensus 26 ~v~~~~~lt~~~~~~~v~~i~l~~~~~--~~~y~~GD~l~v~p~ 67 (421)
+|++++.++ .+++.++|..++. -..|+||+++.|..+
T Consensus 156 ~V~~~~~~s-----~~i~~~~l~~~~~~~~~~~~pGQ~v~l~~~ 194 (396)
T 1gvh_A 156 RIVAKTPRS-----ALITSFELEPVDGGAVAEYRPGQYLGVWLK 194 (396)
T ss_dssp EEEEEEECS-----SSEEEEEEEETTCCCCCCCCTTCEEEEEEC
T ss_pred EEEEEEEcC-----CCeEEEEEEeCCCCcCCCCCCCCeEEEEec
Confidence 899999987 4788999998732 258999999999876
No 57
>2lx9_A Ferrous iron transport protein A; FEOA; NMR {Escherichia coli}
Probab=24.17 E-value=99 Score=22.90 Aligned_cols=39 Identities=13% Similarity=0.110 Sum_probs=31.8
Q ss_pred ccCCCCEEEEccCCC--HHHHHHHHHHcCCCCCceEEEeeC
Q 014605 55 EYEVGDVLEILPSQD--PAAVDTFIQRCNLDPDALITVQHK 93 (421)
Q Consensus 55 ~y~~GD~l~v~p~N~--~~~V~~~l~~l~l~~~~~v~~~~~ 93 (421)
+.++|+..-|.--+. +..+.+-|..+|+.+.+.|++...
T Consensus 2 ~l~~G~~~~I~~i~~~~~~~~~rrL~~mGl~pG~~V~Vi~~ 42 (83)
T 2lx9_A 2 QYTPDTAWKITGFSREISPAYRQKLLSLGMLPGSSFNVVRV 42 (83)
T ss_dssp CSCSSCEEEEEECCSSSCHHHHHHHHHSSCCSSSEEEEEEE
T ss_pred ccCCCCEEEEEEEECCCCHHHHHHHHHCCCCCCCEEEEEEe
Confidence 567899888877776 477888888999999999988653
No 58
>2cnd_A NADH-dependent nitrate reductase; nitrate assimilating enzyme, oxidoreductase, nitrogenous acceptor; HET: FAD; 2.50A {Zea mays} SCOP: b.43.4.2 c.25.1.1 PDB: 1cnf_A* 1cne_A*
Probab=23.44 E-value=1.1e+02 Score=27.37 Aligned_cols=37 Identities=19% Similarity=0.491 Sum_probs=30.3
Q ss_pred eEEEeeeecCCCCCCcEEEEEEEecCC--CcccCCCCEEEEccC
Q 014605 26 KMIKNQPLTKSGSGKDVHHFEFEFVSA--AIEYEVGDVLEILPS 67 (421)
Q Consensus 26 ~v~~~~~lt~~~~~~~v~~i~l~~~~~--~~~y~~GD~l~v~p~ 67 (421)
+|++++.+++ +++.++|..++. ...|+||.++.|..+
T Consensus 16 ~v~~~~~~~~-----~~~~~~l~~~~~~~~~~~~pGQ~v~l~~~ 54 (270)
T 2cnd_A 16 RLVAKKELSR-----DVRLFRFSLPSPDQVLGLPIGKHIFVCAT 54 (270)
T ss_dssp EEEEEEEEET-----TEEEEEEECSSTTCCCCCCTTCEEEEEEE
T ss_pred EEEEEEEeCC-----CeEEEEEECCCCccccCCCCCCEEEEEee
Confidence 8999999984 688999998742 468999999998754
No 59
>1fdr_A Flavodoxin reductase; ferredoxin reductase, flavin, oxidoreductase, flavoprotein; HET: FAD; 1.70A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1 PDB: 2xnj_A* 3fpk_A*
Probab=22.54 E-value=1.2e+02 Score=26.68 Aligned_cols=36 Identities=14% Similarity=0.212 Sum_probs=29.4
Q ss_pred eEEEeeeecCCCCCCcEEEEEEEecCCCcccCCCCEEEEccCC
Q 014605 26 KMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQ 68 (421)
Q Consensus 26 ~v~~~~~lt~~~~~~~v~~i~l~~~~~~~~y~~GD~l~v~p~N 68 (421)
+|++++.+++ +++.++|. + ....|+||.++.|..+.
T Consensus 8 ~V~~~~~~~~-----~~~~l~l~-~-~~~~~~pGq~v~l~~~~ 43 (248)
T 1fdr_A 8 KVTKVQNWTD-----ALFSLTVH-A-PVLPFTAGQFTKLGLEI 43 (248)
T ss_dssp EEEEEEECSS-----SEEEEEEE-C-CCCCCCTTCEEEEEECC
T ss_pred EEEEEEEcCC-----CEEEEEEe-C-CCCCcCCCCcEEEEccC
Confidence 8899998874 68899986 4 46789999999998764
No 60
>3rui_B Autophagy-related protein 8; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} SCOP: d.15.1.3 PDB: 2kq7_A 2zpn_A 3vxw_A 2kwc_A 2li5_A 3vh3_B 3vh4_B*
Probab=22.54 E-value=3e+02 Score=21.96 Aligned_cols=86 Identities=17% Similarity=0.222 Sum_probs=58.7
Q ss_pred CceEEEEe-ecCCCCCCCCCCCeEEEeCCCcchhHHHHHHHHHHhcCCCCCCCEEEEEcccCCC-ccccHHHHHHhhhcC
Q 014605 247 GIYIPAWF-QKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNED-DFLYRELWLSHSLND 324 (421)
Q Consensus 247 G~~v~i~~-~~g~F~lp~~~~piimIa~GTGIAPf~s~l~~~~~~~~~~~~~~~~L~~G~R~~~-d~ly~del~~~~~~~ 324 (421)
-+.|+|-+ +.+.=.+|..++.-.+|-...=++-|..+|+.+...... ..+.||.+.--+. |-...+-.+.+....
T Consensus 28 P~riPVIvE~~~~~~~P~ldk~KflVp~~~tv~qf~~~iRkrl~l~~~---~alFl~Vn~~~p~~~~~m~~lY~~~kdeD 104 (118)
T 3rui_B 28 KNRIPVICEKAEKSDIPEIDKRKYLVPADLTVGQFVYVIRKRIMLPPE---KAIFIFVNDTLPPTAALMSAIYQEHKDKD 104 (118)
T ss_dssp SSEEEEEEEECTTCCSCCCSCCEEEEETTSBHHHHHHHHHHHTTCCTT---CCEEEEBTTBCCCTTSBHHHHHHHHCCTT
T ss_pred CCceEEEEEeCCCCCCCccccceEEcCCCCCHHHHHHHHHHHhCcCCC---ccEEEEECCccCCccchHHHHHHHcCCCC
Confidence 46677666 344445675566778899999999999999998876543 4566666655555 777777777775442
Q ss_pred CCccccCCCcEEEEeccCC
Q 014605 325 GVFSEAKGGGFYVAFSRKQ 343 (421)
Q Consensus 325 g~l~~~~~~~~~~a~Sr~~ 343 (421)
| -+++.||..+
T Consensus 105 G--------fLyv~Ys~~~ 115 (118)
T 3rui_B 105 G--------FLYVTYSGEN 115 (118)
T ss_dssp S--------CEEEEEEECC
T ss_pred C--------eEEEEEeccc
Confidence 5 4677777653
No 61
>2gpj_A Siderophore-interacting protein; structural genomics, joint for structural genomics, JCSG; HET: FAD; 2.20A {Shewanella putrefaciens}
Probab=20.38 E-value=1.4e+02 Score=26.78 Aligned_cols=38 Identities=11% Similarity=0.147 Sum_probs=30.1
Q ss_pred eEEEeeeecCCCCCCcEEEEEEEecCC-Cc-ccCCCCEEEEccCC
Q 014605 26 KMIKNQPLTKSGSGKDVHHFEFEFVSA-AI-EYEVGDVLEILPSQ 68 (421)
Q Consensus 26 ~v~~~~~lt~~~~~~~v~~i~l~~~~~-~~-~y~~GD~l~v~p~N 68 (421)
+|++++.+|+ +++.++|..++. .. .|+||.+|.|..+.
T Consensus 12 ~V~~~~~~t~-----~~~~l~l~~~~~~~~~~~~pGQ~v~l~~~~ 51 (252)
T 2gpj_A 12 EVIRSTYITP-----HMLRITLGGAGLAGFPADQESAYIKLLFPQ 51 (252)
T ss_dssp EEEEEEEEET-----TEEEEEEESGGGTTCCSCCTTCEEEEEECC
T ss_pred EEEEEEEcCC-----CEEEEEEEcCChhhcCCCCCCCeEEEEccc
Confidence 8999999984 788999997632 22 58999999997654
Done!