Query 014606
Match_columns 421
No_of_seqs 184 out of 1967
Neff 8.1
Searched_HMMs 46136
Date Fri Mar 29 06:46:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014606.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014606hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02854 3-ketoacyl-CoA syntha 100.0 5.2E-69 1.1E-73 546.8 38.3 413 3-417 106-520 (521)
2 PLN02932 3-ketoacyl-CoA syntha 100.0 2.4E-68 5.2E-73 539.2 33.4 410 3-414 60-475 (478)
3 PLN02192 3-ketoacyl-CoA syntha 100.0 4E-67 8.7E-72 531.8 33.3 403 3-419 94-509 (511)
4 PLN02377 3-ketoacyl-CoA syntha 100.0 2.9E-66 6.4E-71 526.9 38.1 410 3-415 90-500 (502)
5 PLN00415 3-ketoacyl-CoA syntha 100.0 3.6E-63 7.8E-68 495.6 40.2 410 4-415 53-465 (466)
6 COG0332 FabH 3-oxoacyl-[acyl-c 100.0 9.1E-62 2E-66 468.2 25.2 317 9-393 2-323 (323)
7 PLN03172 chalcone synthase fam 100.0 2.9E-52 6.3E-57 418.1 35.8 348 9-393 15-387 (393)
8 PLN03169 chalcone synthase fam 100.0 1.5E-52 3.3E-57 421.2 33.1 351 7-393 18-389 (391)
9 PRK12880 3-oxoacyl-(acyl carri 100.0 5.9E-53 1.3E-57 419.2 25.5 338 7-400 4-346 (353)
10 PLN03168 chalcone synthase; Pr 100.0 9E-52 2E-56 414.7 34.1 349 9-395 14-388 (389)
11 cd00831 CHS_like Chalcone and 100.0 1.4E-51 3E-56 412.0 35.1 345 10-390 1-361 (361)
12 PLN03170 chalcone synthase; Pr 100.0 3.1E-51 6.8E-56 412.0 32.1 350 9-394 19-392 (401)
13 PRK05963 3-oxoacyl-(acyl carri 100.0 1.3E-51 2.7E-56 406.9 28.6 320 9-392 2-326 (326)
14 PLN03173 chalcone synthase; Pr 100.0 4.7E-51 1E-55 409.1 32.9 348 9-393 15-387 (391)
15 PLN03171 chalcone synthase-lik 100.0 2.9E-50 6.2E-55 405.4 34.2 351 9-394 21-396 (399)
16 CHL00203 fabH 3-oxoacyl-acyl-c 100.0 2.1E-50 4.6E-55 398.1 25.8 320 10-393 2-326 (326)
17 PLN02326 3-oxoacyl-[acyl-carri 100.0 3.9E-50 8.5E-55 403.4 26.2 328 9-392 46-379 (379)
18 PRK07204 3-oxoacyl-(acyl carri 100.0 2.8E-49 6.2E-54 390.6 29.4 321 9-392 3-329 (329)
19 PRK12879 3-oxoacyl-(acyl carri 100.0 1.1E-48 2.4E-53 385.6 29.6 318 9-393 3-325 (325)
20 PRK09258 3-oxoacyl-(acyl carri 100.0 1.1E-48 2.4E-53 387.7 26.6 323 6-392 1-338 (338)
21 COG3424 BcsA Predicted naringe 100.0 6.6E-48 1.4E-52 357.0 29.2 346 11-394 2-354 (356)
22 PRK06840 hypothetical protein; 100.0 2.8E-47 6E-52 377.9 30.0 324 9-394 3-337 (339)
23 cd00830 KAS_III Ketoacyl-acyl 100.0 1.2E-46 2.5E-51 370.2 27.7 315 10-390 1-320 (320)
24 TIGR00747 fabH 3-oxoacyl-(acyl 100.0 1.7E-46 3.7E-51 369.0 27.6 309 10-392 2-318 (318)
25 PRK06816 3-oxoacyl-(acyl carri 100.0 1.3E-45 2.8E-50 370.5 30.0 344 10-393 2-378 (378)
26 PRK04262 hypothetical protein; 100.0 4.4E-46 9.6E-51 370.2 25.6 311 9-397 1-313 (347)
27 TIGR00748 HMG_CoA_syn_Arc hydr 100.0 4.7E-46 1E-50 369.2 24.4 308 11-397 2-312 (345)
28 PRK09352 3-oxoacyl-(acyl carri 100.0 3.1E-45 6.8E-50 360.1 29.8 314 8-393 1-319 (319)
29 PRK07515 3-oxoacyl-(acyl carri 100.0 2.4E-43 5.2E-48 353.8 28.1 343 9-392 1-371 (372)
30 PF08392 FAE1_CUT1_RppA: FAE1/ 100.0 3.1E-42 6.7E-47 324.2 29.5 287 4-290 2-288 (290)
31 cd00827 init_cond_enzymes "ini 100.0 4E-41 8.7E-46 331.4 24.5 310 10-390 1-324 (324)
32 TIGR01835 HMG-CoA-S_prok 3-hyd 100.0 3.2E-39 7E-44 323.9 27.2 308 11-395 1-320 (379)
33 PLN02577 hydroxymethylglutaryl 100.0 1.7E-37 3.8E-42 313.9 25.0 309 8-396 2-374 (459)
34 COG3425 PksG 3-hydroxy-3-methy 100.0 3.4E-36 7.4E-41 291.3 22.8 312 9-397 1-315 (377)
35 TIGR01833 HMG-CoA-S_euk 3-hydr 100.0 2E-34 4.3E-39 291.3 24.3 315 10-395 1-376 (454)
36 PF00195 Chal_sti_synt_N: Chal 100.0 1.9E-32 4.1E-37 251.7 15.0 201 7-209 11-226 (226)
37 cd00327 cond_enzymes Condensin 100.0 1.4E-28 3.1E-33 233.6 15.4 235 85-390 7-254 (254)
38 cd00825 decarbox_cond_enzymes 99.9 1.4E-26 3E-31 228.6 13.3 252 85-390 11-332 (332)
39 PF08541 ACP_syn_III_C: 3-Oxoa 99.9 3.8E-22 8.3E-27 159.5 6.3 89 293-392 2-90 (90)
40 PF01154 HMG_CoA_synt_N: Hydro 99.8 2.3E-20 4.9E-25 163.7 10.0 168 7-209 1-173 (174)
41 PRK06147 3-oxoacyl-(acyl carri 99.8 4.5E-19 9.8E-24 176.3 19.6 310 9-394 3-344 (348)
42 TIGR02845 spore_V_AD stage V s 99.8 1.3E-18 2.7E-23 166.6 19.2 230 85-384 50-307 (327)
43 PF02797 Chal_sti_synt_C: Chal 99.8 2.8E-18 6.1E-23 149.3 14.3 127 237-393 17-150 (151)
44 KOG1393 Hydroxymethylglutaryl- 99.8 1.1E-17 2.4E-22 159.6 16.9 323 8-398 9-382 (462)
45 PRK08304 stage V sporulation p 99.7 8.6E-17 1.9E-21 154.4 17.7 233 86-384 57-314 (337)
46 cd00751 thiolase Thiolase are 99.7 2.9E-15 6.2E-20 151.3 17.1 94 85-179 22-116 (386)
47 cd00834 KAS_I_II Beta-ketoacyl 99.6 1.4E-14 3E-19 147.2 20.0 315 9-390 1-406 (406)
48 PRK05656 acetyl-CoA acetyltran 99.6 1.1E-14 2.3E-19 147.3 17.8 94 85-179 26-120 (393)
49 TIGR01930 AcCoA-C-Actrans acet 99.6 1E-14 2.3E-19 147.0 16.4 94 85-179 21-115 (386)
50 PRK09051 beta-ketothiolase; Pr 99.6 2E-14 4.3E-19 145.1 17.9 94 85-179 27-122 (394)
51 smart00825 PKS_KS Beta-ketoacy 99.6 6.9E-14 1.5E-18 143.0 17.5 252 85-391 87-422 (424)
52 PRK09052 acetyl-CoA acetyltran 99.6 6.4E-14 1.4E-18 141.6 16.7 94 85-179 31-127 (399)
53 PRK07108 acetyl-CoA acetyltran 99.5 1.4E-13 2.9E-18 139.0 17.2 94 85-179 27-122 (392)
54 PRK06064 acetyl-CoA acetyltran 99.5 1.9E-13 4.1E-18 138.2 18.2 92 85-178 22-116 (389)
55 PRK08313 acetyl-CoA acetyltran 99.5 3E-13 6.5E-18 136.4 19.3 91 86-178 25-117 (386)
56 PRK08242 acetyl-CoA acetyltran 99.5 1.8E-13 3.8E-18 138.1 17.6 94 85-179 28-123 (402)
57 PRK06501 3-oxoacyl-(acyl carri 99.5 3.3E-13 7.1E-18 137.9 19.6 317 8-393 10-423 (425)
58 cd00828 elong_cond_enzymes "el 99.5 3.6E-13 7.7E-18 137.0 19.4 247 85-390 72-407 (407)
59 cd00829 SCP-x_thiolase Thiolas 99.5 3.2E-13 7E-18 135.9 18.8 93 85-179 16-109 (375)
60 PRK05790 putative acyltransfer 99.5 3.1E-13 6.8E-18 136.8 18.1 93 85-178 26-119 (393)
61 PRK08235 acetyl-CoA acetyltran 99.5 2.3E-13 5E-18 137.4 16.9 94 85-179 26-120 (393)
62 PRK12578 acetyl-CoA acetyltran 99.5 4.6E-13 1E-17 135.2 18.7 91 86-178 22-113 (385)
63 PRK06205 acetyl-CoA acetyltran 99.5 2.7E-13 5.9E-18 137.5 16.5 93 85-178 26-119 (404)
64 TIGR03150 fabF beta-ketoacyl-a 99.5 1.1E-12 2.5E-17 133.2 19.8 318 9-391 1-407 (407)
65 PF08545 ACP_syn_III: 3-Oxoacy 99.5 4.6E-14 1E-18 110.1 6.8 66 140-210 1-66 (80)
66 PRK12404 stage V sporulation p 99.5 1.1E-12 2.4E-17 125.5 17.5 238 81-384 50-312 (334)
67 PRK06954 acetyl-CoA acetyltran 99.5 1.2E-12 2.6E-17 132.5 16.7 94 85-179 31-125 (397)
68 PRK06059 lipid-transfer protei 99.5 4.3E-12 9.3E-17 128.7 19.9 91 86-178 24-116 (399)
69 PRK07661 acetyl-CoA acetyltran 99.5 2.8E-12 6E-17 129.4 18.0 94 85-179 27-122 (391)
70 PRK06445 acetyl-CoA acetyltran 99.5 2.5E-12 5.4E-17 130.1 17.7 91 85-178 32-126 (394)
71 PRK06065 acetyl-CoA acetyltran 99.4 1.2E-11 2.6E-16 124.7 22.2 90 86-177 30-121 (392)
72 PRK07314 3-oxoacyl-(acyl carri 99.4 6.4E-12 1.4E-16 128.0 20.1 319 9-392 2-409 (411)
73 PLN02287 3-ketoacyl-CoA thiola 99.4 8.2E-12 1.8E-16 127.8 19.3 94 85-179 71-166 (452)
74 PRK06025 acetyl-CoA acetyltran 99.4 1E-11 2.3E-16 125.0 18.4 94 85-179 29-124 (417)
75 PRK07103 polyketide beta-ketoa 99.4 1.4E-11 3.1E-16 125.4 18.7 248 85-391 80-409 (410)
76 cd00833 PKS polyketide synthas 99.4 7.5E-12 1.6E-16 127.7 16.7 120 85-210 87-247 (421)
77 PRK08722 3-oxoacyl-(acyl carri 99.4 5E-11 1.1E-15 121.4 22.2 318 7-391 2-412 (414)
78 PRK06158 thiolase; Provisional 99.4 2.1E-11 4.5E-16 123.0 19.2 86 86-176 29-115 (384)
79 PRK06333 3-oxoacyl-(acyl carri 99.4 1.5E-11 3.3E-16 125.8 17.8 319 7-392 2-421 (424)
80 PRK06690 acetyl-CoA acetyltran 99.4 3.5E-11 7.5E-16 119.9 18.9 242 85-392 25-359 (361)
81 PRK08256 lipid-transfer protei 99.4 3.5E-11 7.6E-16 121.7 19.2 88 86-178 23-111 (391)
82 PRK07850 acetyl-CoA acetyltran 99.4 3E-11 6.6E-16 121.7 18.6 94 85-179 26-121 (387)
83 PRK07851 acetyl-CoA acetyltran 99.3 2.6E-11 5.7E-16 123.0 17.0 93 85-179 27-122 (406)
84 PRK07516 acetyl-CoA acetyltran 99.3 4.6E-11 1E-15 120.8 18.5 91 86-178 23-116 (389)
85 PLN02644 acetyl-CoA C-acetyltr 99.3 5.9E-11 1.3E-15 120.1 18.9 93 85-178 25-118 (394)
86 PRK08439 3-oxoacyl-(acyl carri 99.3 1.4E-10 3.1E-15 117.9 21.7 314 9-392 2-405 (406)
87 PRK06633 acetyl-CoA acetyltran 99.3 3.8E-11 8.2E-16 121.0 16.5 94 85-179 27-121 (392)
88 PRK13359 beta-ketoadipyl CoA t 99.3 6.9E-11 1.5E-15 119.5 18.4 94 85-179 26-122 (400)
89 PRK08963 fadI 3-ketoacyl-CoA t 99.3 8.4E-11 1.8E-15 120.1 18.7 94 85-179 29-123 (428)
90 PRK06289 acetyl-CoA acetyltran 99.3 7.7E-11 1.7E-15 119.7 18.3 89 86-178 27-121 (403)
91 PLN02787 3-oxoacyl-[acyl-carri 99.3 3.8E-10 8.2E-15 117.8 22.8 318 8-392 128-538 (540)
92 PRK06504 acetyl-CoA acetyltran 99.3 1.4E-10 3E-15 116.9 19.0 94 85-179 26-121 (390)
93 PRK06366 acetyl-CoA acetyltran 99.3 1.2E-10 2.6E-15 117.7 17.9 93 85-178 26-119 (388)
94 PRK05952 3-oxoacyl-(acyl carri 99.3 3.3E-10 7.1E-15 114.0 21.0 299 9-391 2-380 (381)
95 PRK09050 beta-ketoadipyl CoA t 99.3 1.1E-10 2.3E-15 118.2 17.4 94 85-179 26-122 (401)
96 PRK09185 3-oxoacyl-(acyl carri 99.3 1E-09 2.2E-14 111.1 23.5 207 121-393 137-391 (392)
97 PRK09116 3-oxoacyl-(acyl carri 99.3 7.2E-10 1.6E-14 112.6 21.9 310 9-391 2-405 (405)
98 PTZ00050 3-oxoacyl-acyl carrie 99.3 2.5E-10 5.3E-15 116.7 18.1 251 85-392 77-420 (421)
99 TIGR02430 pcaF beta-ketoadipyl 99.2 1.7E-10 3.7E-15 116.7 16.4 94 85-179 25-121 (400)
100 PLN02836 3-oxoacyl-[acyl-carri 99.2 9.8E-10 2.1E-14 112.8 22.2 251 85-392 93-435 (437)
101 cd00832 CLF Chain-length facto 99.2 6.3E-10 1.4E-14 112.9 20.3 280 9-361 1-343 (399)
102 PRK07801 acetyl-CoA acetyltran 99.2 1.5E-10 3.2E-15 116.8 15.6 93 85-178 26-120 (382)
103 PRK06157 acetyl-CoA acetyltran 99.2 9.4E-10 2E-14 111.5 20.6 91 86-178 28-119 (398)
104 PRK08947 fadA 3-ketoacyl-CoA t 99.2 5.8E-10 1.2E-14 112.6 18.5 94 85-179 27-123 (387)
105 PRK06365 acetyl-CoA acetyltran 99.2 1.4E-09 2.9E-14 111.3 20.6 91 86-178 38-130 (430)
106 PRK07910 3-oxoacyl-(acyl carri 99.2 2.6E-09 5.6E-14 109.0 22.5 316 8-392 11-417 (418)
107 TIGR02445 fadA fatty oxidation 99.2 6.7E-10 1.4E-14 112.0 17.3 94 85-179 25-121 (385)
108 PRK06519 3-oxoacyl-(acyl carri 99.2 5.1E-09 1.1E-13 105.9 23.1 305 5-391 2-395 (398)
109 PRK08170 acetyl-CoA acetyltran 99.1 2.1E-10 4.5E-15 117.2 10.5 94 85-179 27-121 (426)
110 PRK14691 3-oxoacyl-(acyl carri 99.1 2.7E-09 5.8E-14 105.8 17.6 247 86-392 5-339 (342)
111 PF00108 Thiolase_N: Thiolase, 99.1 4E-10 8.7E-15 107.9 10.6 95 85-180 26-121 (264)
112 PRK08257 acetyl-CoA acetyltran 99.1 3.5E-09 7.7E-14 110.0 18.1 91 85-177 27-119 (498)
113 PRK07967 3-oxoacyl-(acyl carri 99.1 2.2E-08 4.9E-13 101.6 22.3 311 9-392 2-403 (406)
114 cd00826 nondecarbox_cond_enzym 99.1 5.8E-10 1.3E-14 112.8 10.7 93 85-179 23-117 (393)
115 PRK08142 acetyl-CoA acetyltran 99.1 2E-08 4.2E-13 101.4 21.6 87 86-177 26-112 (388)
116 KOG1390 Acetyl-CoA acetyltrans 99.1 1.3E-09 2.7E-14 103.0 11.1 95 85-180 30-125 (396)
117 PRK06066 acetyl-CoA acetyltran 99.0 4.8E-08 1E-12 98.3 20.3 88 86-178 26-116 (385)
118 PRK08131 acetyl-CoA acetyltran 98.9 8.7E-09 1.9E-13 104.4 10.7 95 85-180 26-122 (401)
119 TIGR02446 FadI fatty oxidation 98.8 1.2E-08 2.7E-13 104.1 9.8 94 85-179 31-125 (430)
120 TIGR02813 omega_3_PfaA polyket 98.8 5.4E-07 1.2E-11 108.3 23.6 214 123-393 185-462 (2582)
121 PTZ00455 3-ketoacyl-CoA thiola 98.8 2.9E-08 6.3E-13 101.6 11.0 94 85-179 48-152 (438)
122 PF00109 ketoacyl-synt: Beta-k 98.8 7.8E-08 1.7E-12 91.2 13.2 118 85-208 87-251 (254)
123 COG0304 FabB 3-oxoacyl-(acyl-c 98.7 5.2E-07 1.1E-11 91.1 16.8 121 84-211 70-245 (412)
124 PRK09268 acetyl-CoA acetyltran 98.7 1E-07 2.2E-12 97.4 10.5 95 85-180 31-126 (427)
125 PF07451 SpoVAD: Stage V sporu 98.7 5.9E-07 1.3E-11 85.2 14.2 238 81-383 47-308 (329)
126 PRK07937 lipid-transfer protei 98.6 2.7E-06 5.9E-11 84.8 19.2 88 86-178 25-114 (352)
127 KOG1389 3-oxoacyl CoA thiolase 98.5 1.3E-06 2.8E-11 82.6 10.9 92 87-180 63-156 (435)
128 COG3321 Polyketide synthase mo 98.3 7.5E-05 1.6E-09 84.4 22.8 224 87-362 93-361 (1061)
129 PRK07855 lipid-transfer protei 98.3 3.4E-06 7.3E-11 85.3 9.7 84 86-174 25-108 (386)
130 KOG1394 3-oxoacyl-(acyl-carrie 98.2 4.6E-06 1E-10 80.4 8.7 121 83-210 92-269 (440)
131 COG0183 PaaJ Acetyl-CoA acetyl 98.0 2.5E-05 5.5E-10 79.1 9.6 95 86-181 28-126 (392)
132 KOG1406 Peroxisomal 3-ketoacyl 98.0 7.4E-06 1.6E-10 75.9 4.9 89 87-180 31-120 (408)
133 KOG1391 Acetyl-CoA acetyltrans 97.4 0.00031 6.8E-09 65.1 5.5 93 85-180 28-124 (396)
134 PF08540 HMG_CoA_synt_C: Hydro 97.3 0.00048 1.1E-08 66.2 7.0 62 336-397 143-206 (282)
135 KOG1392 Acetyl-CoA acetyltrans 97.2 0.00034 7.3E-09 65.8 3.7 95 85-180 66-161 (465)
136 PF13723 Ketoacyl-synt_2: Beta 96.2 0.083 1.8E-06 49.0 12.0 114 85-210 34-172 (218)
137 PF08541 ACP_syn_III_C: 3-Oxoa 96.1 0.009 2E-07 47.1 4.5 72 97-175 1-78 (90)
138 PF02803 Thiolase_C: Thiolase, 95.1 0.021 4.7E-07 48.0 3.5 95 288-391 28-122 (123)
139 TIGR00748 HMG_CoA_syn_Arc hydr 94.5 0.15 3.3E-06 50.8 8.4 83 85-173 206-293 (345)
140 PRK06816 3-oxoacyl-(acyl carri 94.2 0.3 6.4E-06 49.3 9.7 85 85-176 270-365 (378)
141 CHL00203 fabH 3-oxoacyl-acyl-c 94.0 0.18 3.9E-06 49.7 7.7 84 86-173 225-311 (326)
142 PRK07204 3-oxoacyl-(acyl carri 93.8 0.25 5.4E-06 48.7 8.1 86 84-173 227-315 (329)
143 PRK09258 3-oxoacyl-(acyl carri 93.7 0.32 6.9E-06 48.1 8.9 87 83-176 235-327 (338)
144 PRK12879 3-oxoacyl-(acyl carri 93.7 0.25 5.5E-06 48.4 8.0 83 85-174 223-311 (325)
145 PRK08131 acetyl-CoA acetyltran 93.4 0.18 3.8E-06 51.4 6.5 95 288-392 302-399 (401)
146 PRK05963 3-oxoacyl-(acyl carri 93.3 0.32 6.9E-06 47.8 8.0 84 84-174 224-313 (326)
147 PLN02326 3-oxoacyl-[acyl-carri 92.9 0.48 1E-05 47.8 8.8 83 84-173 277-365 (379)
148 PRK06025 acetyl-CoA acetyltran 92.9 0.4 8.6E-06 48.9 8.1 73 90-169 318-398 (417)
149 KOG1202 Animal-type fatty acid 92.9 0.52 1.1E-05 52.9 9.2 326 8-398 10-421 (2376)
150 cd00830 KAS_III Ketoacyl-acyl 92.7 0.35 7.6E-06 47.2 7.4 84 84-174 220-309 (320)
151 PRK06840 hypothetical protein; 92.7 0.51 1.1E-05 46.7 8.6 82 87-173 237-321 (339)
152 TIGR00747 fabH 3-oxoacyl-(acyl 92.5 0.6 1.3E-05 45.7 8.6 83 84-173 216-304 (318)
153 PRK09352 3-oxoacyl-(acyl carri 92.2 0.59 1.3E-05 45.7 8.2 84 84-174 216-305 (319)
154 PRK04262 hypothetical protein; 91.6 0.45 9.7E-06 47.4 6.7 81 87-173 209-294 (347)
155 COG0332 FabH 3-oxoacyl-[acyl-c 91.2 0.35 7.7E-06 47.5 5.3 89 81-173 217-308 (323)
156 TIGR02446 FadI fatty oxidation 91.1 0.5 1.1E-05 48.6 6.5 68 288-364 317-401 (430)
157 cd00825 decarbox_cond_enzymes 90.4 1.3 2.8E-05 43.4 8.6 78 87-164 205-286 (332)
158 COG3425 PksG 3-hydroxy-3-methy 89.9 2 4.4E-05 42.9 9.3 82 86-173 208-296 (377)
159 PRK07515 3-oxoacyl-(acyl carri 89.7 0.88 1.9E-05 45.7 6.9 86 83-174 267-358 (372)
160 PRK08170 acetyl-CoA acetyltran 89.1 0.91 2E-05 46.6 6.5 92 287-391 312-424 (426)
161 PRK06147 3-oxoacyl-(acyl carri 88.5 1.1 2.3E-05 44.8 6.4 87 89-175 236-330 (348)
162 PTZ00455 3-ketoacyl-CoA thiola 88.2 2.3 4.9E-05 43.9 8.7 69 287-364 314-400 (438)
163 cd00327 cond_enzymes Condensin 88.1 2.5 5.4E-05 39.5 8.4 78 87-164 145-226 (254)
164 PRK12880 3-oxoacyl-(acyl carri 87.2 1.8 4E-05 43.2 7.2 49 84-136 239-287 (353)
165 PRK09050 beta-ketoadipyl CoA t 86.8 1.5 3.2E-05 44.7 6.4 52 89-144 299-350 (401)
166 cd00831 CHS_like Chalcone and 85.9 2.2 4.7E-05 42.7 7.0 84 84-174 256-350 (361)
167 PRK13359 beta-ketoadipyl CoA t 85.1 1.9 4.2E-05 43.8 6.2 52 89-144 298-349 (400)
168 PRK08257 acetyl-CoA acetyltran 84.6 3.2 6.9E-05 43.6 7.7 80 89-173 294-382 (498)
169 PRK06690 acetyl-CoA acetyltran 83.3 3.8 8.2E-05 41.1 7.3 71 88-164 259-337 (361)
170 PRK09268 acetyl-CoA acetyltran 82.5 4.2 9.2E-05 41.8 7.4 94 288-391 315-426 (427)
171 PRK08242 acetyl-CoA acetyltran 81.8 3.3 7.2E-05 42.2 6.3 67 90-162 303-377 (402)
172 PRK09052 acetyl-CoA acetyltran 81.6 2.9 6.4E-05 42.5 5.9 70 88-163 298-375 (399)
173 COG0304 FabB 3-oxoacyl-(acyl-c 81.1 3 6.5E-05 42.6 5.7 44 89-132 278-322 (412)
174 PF02803 Thiolase_C: Thiolase, 80.9 4.3 9.4E-05 34.1 5.7 70 89-164 24-101 (123)
175 TIGR02430 pcaF beta-ketoadipyl 80.1 3.9 8.4E-05 41.7 6.2 70 89-162 298-375 (400)
176 PF00195 Chal_sti_synt_N: Chal 79.9 2.1 4.5E-05 40.0 3.7 84 283-380 103-190 (226)
177 cd00827 init_cond_enzymes "ini 79.7 6.2 0.00013 38.4 7.4 88 82-176 218-315 (324)
178 TIGR01835 HMG-CoA-S_prok 3-hyd 79.6 6.5 0.00014 39.7 7.5 49 85-134 203-252 (379)
179 cd00829 SCP-x_thiolase Thiolas 78.4 8.1 0.00018 38.7 7.9 44 88-135 252-295 (375)
180 PLN03172 chalcone synthase fam 77.6 5 0.00011 40.8 6.0 83 282-378 104-190 (393)
181 PF02801 Ketoacyl-synt_C: Beta 76.8 0.93 2E-05 37.6 0.4 77 88-164 26-110 (119)
182 PRK06366 acetyl-CoA acetyltran 76.6 8.7 0.00019 38.9 7.5 71 88-164 286-364 (388)
183 PLN03173 chalcone synthase; Pr 75.9 6.6 0.00014 39.9 6.4 83 282-378 104-190 (391)
184 PLN03170 chalcone synthase; Pr 75.8 7.5 0.00016 39.6 6.8 81 283-377 109-193 (401)
185 PRK06064 acetyl-CoA acetyltran 75.6 9.4 0.0002 38.6 7.5 42 89-134 260-301 (389)
186 PLN03169 chalcone synthase fam 74.9 13 0.00027 37.8 8.1 84 85-173 279-374 (391)
187 PRK07850 acetyl-CoA acetyltran 74.6 12 0.00025 38.0 7.8 69 88-162 286-362 (387)
188 PLN03168 chalcone synthase; Pr 74.5 7.4 0.00016 39.5 6.3 82 283-378 104-189 (389)
189 COG1214 Inactive homolog of me 73.6 13 0.00028 34.5 7.2 58 87-144 39-97 (220)
190 PRK06954 acetyl-CoA acetyltran 73.1 8.5 0.00018 39.1 6.4 68 89-162 297-372 (397)
191 PRK05656 acetyl-CoA acetyltran 71.9 19 0.0004 36.6 8.5 41 90-134 294-334 (393)
192 PRK09604 UGMP family protein; 71.7 13 0.00027 36.9 7.1 55 86-144 52-111 (332)
193 PRK06519 3-oxoacyl-(acyl carri 71.1 14 0.00031 37.6 7.4 45 89-134 282-327 (398)
194 PRK14691 3-oxoacyl-(acyl carri 70.7 12 0.00026 37.3 6.6 47 87-133 206-253 (342)
195 PRK06445 acetyl-CoA acetyltran 70.6 16 0.00035 37.1 7.7 68 89-162 294-369 (394)
196 PLN02287 3-ketoacyl-CoA thiola 70.4 11 0.00024 39.0 6.6 96 89-210 333-437 (452)
197 PRK07516 acetyl-CoA acetyltran 70.1 10 0.00022 38.3 6.2 43 88-134 261-303 (389)
198 PLN02787 3-oxoacyl-[acyl-carri 70.1 11 0.00024 40.0 6.6 45 89-133 407-452 (540)
199 TIGR01930 AcCoA-C-Actrans acet 69.5 13 0.00028 37.5 6.8 42 89-134 288-329 (386)
200 PRK06158 thiolase; Provisional 69.2 17 0.00036 36.8 7.5 42 89-134 256-297 (384)
201 PRK08256 lipid-transfer protei 68.8 15 0.00033 37.1 7.1 43 89-135 266-308 (391)
202 PF07736 CM_1: Chorismate muta 68.7 14 0.00031 30.7 5.5 56 85-144 18-76 (118)
203 PF08392 FAE1_CUT1_RppA: FAE1/ 68.5 14 0.00029 35.8 6.2 80 286-379 89-172 (290)
204 PLN02932 3-ketoacyl-CoA syntha 68.4 11 0.00024 39.3 6.0 65 284-362 152-220 (478)
205 COG0533 QRI7 Metal-dependent p 68.0 15 0.00032 36.3 6.5 83 87-176 52-137 (342)
206 PRK05790 putative acyltransfer 67.2 17 0.00037 36.7 7.1 68 89-162 293-368 (393)
207 PLN02377 3-ketoacyl-CoA syntha 67.2 12 0.00026 39.3 6.0 65 284-362 176-244 (502)
208 PRK06205 acetyl-CoA acetyltran 67.2 16 0.00034 37.2 6.9 42 89-134 300-341 (404)
209 PRK09185 3-oxoacyl-(acyl carri 66.7 22 0.00047 36.0 7.8 74 89-164 262-340 (392)
210 PRK07314 3-oxoacyl-(acyl carri 66.6 11 0.00023 38.3 5.6 45 89-133 278-323 (411)
211 TIGR03150 fabF beta-ketoacyl-a 66.1 11 0.00023 38.2 5.4 45 89-133 277-322 (407)
212 cd00834 KAS_I_II Beta-ketoacyl 66.0 11 0.00024 38.0 5.4 77 88-164 276-358 (406)
213 cd00826 nondecarbox_cond_enzym 65.0 8.8 0.00019 39.0 4.5 69 287-364 274-360 (393)
214 PLN02192 3-ketoacyl-CoA syntha 64.9 16 0.00035 38.3 6.5 79 286-378 182-264 (511)
215 PRK06504 acetyl-CoA acetyltran 64.7 26 0.00056 35.5 7.8 53 88-147 289-341 (390)
216 cd00751 thiolase Thiolase are 64.6 17 0.00037 36.7 6.5 42 89-134 287-328 (386)
217 PRK09051 beta-ketothiolase; Pr 64.4 19 0.00041 36.6 6.8 50 89-144 294-343 (394)
218 TIGR01796 CM_mono_aroH monofun 63.7 21 0.00046 29.6 5.6 53 88-144 21-76 (117)
219 cd00828 elong_cond_enzymes "el 63.3 14 0.00031 37.3 5.7 46 87-132 274-320 (407)
220 TIGR03723 bact_gcp putative gl 63.0 22 0.00048 34.9 6.8 55 86-144 50-109 (314)
221 PRK06289 acetyl-CoA acetyltran 62.6 36 0.00079 34.5 8.5 42 89-134 278-319 (403)
222 PLN03171 chalcone synthase-lik 62.3 17 0.00036 37.0 6.0 67 283-363 111-181 (399)
223 TIGR00329 gcp_kae1 metallohydr 61.8 26 0.00057 34.1 7.1 55 86-144 49-108 (305)
224 PRK05952 3-oxoacyl-(acyl carri 61.4 16 0.00035 36.9 5.6 46 87-132 254-300 (381)
225 cd00832 CLF Chain-length facto 61.3 18 0.00039 36.8 6.0 47 88-134 271-318 (399)
226 TIGR02445 fadA fatty oxidation 61.3 37 0.00081 34.3 8.2 42 89-134 282-323 (385)
227 PF02801 Ketoacyl-synt_C: Beta 60.9 4.2 9.2E-05 33.6 1.1 68 287-363 30-104 (119)
228 KOG1394 3-oxoacyl-(acyl-carrie 59.7 12 0.00025 37.2 4.0 47 88-134 302-349 (440)
229 PRK07855 lipid-transfer protei 59.6 44 0.00095 33.8 8.4 25 89-113 268-292 (386)
230 KOG2707 Predicted metalloprote 59.1 17 0.00037 36.0 5.0 47 88-134 85-136 (405)
231 PRK08947 fadA 3-ketoacyl-CoA t 58.9 38 0.00083 34.2 7.9 70 89-162 284-362 (387)
232 PLN00415 3-ketoacyl-CoA syntha 58.8 23 0.00051 36.7 6.3 77 288-378 142-222 (466)
233 PRK12578 acetyl-CoA acetyltran 58.6 31 0.00067 34.8 7.1 42 89-134 259-300 (385)
234 smart00825 PKS_KS Beta-ketoacy 57.8 32 0.00069 35.0 7.2 46 88-133 280-326 (424)
235 PTZ00050 3-oxoacyl-acyl carrie 57.0 33 0.00073 35.0 7.2 46 88-133 284-331 (421)
236 PRK08722 3-oxoacyl-(acyl carri 56.9 32 0.0007 35.1 7.0 46 88-133 279-325 (414)
237 KOG2708 Predicted metalloprote 56.8 12 0.00026 34.8 3.4 84 87-176 51-135 (336)
238 PRK07910 3-oxoacyl-(acyl carri 56.6 25 0.00054 36.0 6.1 46 88-133 287-333 (418)
239 PRK14878 UGMP family protein; 56.6 33 0.00072 33.8 6.8 53 88-144 47-104 (323)
240 PRK09116 3-oxoacyl-(acyl carri 55.9 22 0.00047 36.3 5.5 45 88-132 276-321 (405)
241 PLN02854 3-ketoacyl-CoA syntha 55.8 56 0.0012 34.5 8.5 81 89-173 387-479 (521)
242 PRK07801 acetyl-CoA acetyltran 55.7 24 0.00052 35.6 5.8 50 89-144 282-331 (382)
243 cd02185 AroH Chorismate mutase 55.5 38 0.00082 28.1 5.7 55 87-144 20-76 (117)
244 PRK06066 acetyl-CoA acetyltran 55.4 71 0.0015 32.3 9.1 41 90-134 259-301 (385)
245 PRK07851 acetyl-CoA acetyltran 55.3 19 0.00041 36.7 5.0 76 89-171 305-388 (406)
246 PRK06059 lipid-transfer protei 55.1 46 0.001 33.7 7.8 41 90-134 276-316 (399)
247 PRK07937 lipid-transfer protei 54.9 53 0.0012 32.8 8.0 78 90-173 249-334 (352)
248 PRK12404 stage V sporulation p 54.5 47 0.001 32.8 7.2 74 287-380 61-137 (334)
249 PRK07661 acetyl-CoA acetyltran 53.9 30 0.00064 35.1 6.1 71 88-164 290-368 (391)
250 PRK06633 acetyl-CoA acetyltran 53.7 26 0.00057 35.5 5.7 68 89-164 292-369 (392)
251 PRK06501 3-oxoacyl-(acyl carri 53.6 23 0.0005 36.3 5.3 44 89-132 291-335 (425)
252 PRK06333 3-oxoacyl-(acyl carri 52.9 26 0.00056 35.8 5.5 45 88-132 289-334 (424)
253 PRK08235 acetyl-CoA acetyltran 52.8 30 0.00064 35.1 5.9 69 88-162 292-368 (393)
254 PRK09585 anmK anhydro-N-acetyl 52.7 40 0.00087 33.9 6.6 64 80-143 64-137 (365)
255 PRK08304 stage V sporulation p 51.9 32 0.00069 34.0 5.6 75 286-380 62-139 (337)
256 cd00833 PKS polyketide synthas 49.8 47 0.001 33.6 6.9 46 87-132 279-325 (421)
257 PF12633 Adenyl_cycl_N: Adenyl 49.7 18 0.00039 33.1 3.3 56 307-365 114-192 (204)
258 TIGR03725 bact_YeaZ universal 49.6 24 0.00052 32.1 4.2 54 86-143 34-92 (202)
259 COG3424 BcsA Predicted naringe 49.4 43 0.00094 32.7 5.9 75 279-364 75-153 (356)
260 TIGR03722 arch_KAE1 universal 48.5 45 0.00098 32.8 6.3 53 88-144 48-105 (322)
261 PRK07108 acetyl-CoA acetyltran 48.5 30 0.00065 35.1 5.1 23 89-111 292-314 (392)
262 PLN02836 3-oxoacyl-[acyl-carri 47.7 43 0.00094 34.4 6.2 45 88-132 300-345 (437)
263 PLN02644 acetyl-CoA C-acetyltr 47.1 50 0.0011 33.5 6.5 41 90-134 294-334 (394)
264 PRK13410 molecular chaperone D 46.7 71 0.0015 34.9 7.9 69 83-155 305-373 (668)
265 PF00814 Peptidase_M22: Glycop 45.9 13 0.00029 35.5 2.0 54 87-144 31-89 (268)
266 PRK09605 bifunctional UGMP fam 42.4 69 0.0015 33.8 7.0 54 86-144 50-108 (535)
267 PRK06365 acetyl-CoA acetyltran 41.5 80 0.0017 32.5 7.0 42 89-134 295-338 (430)
268 PRK08963 fadI 3-ketoacyl-CoA t 41.2 92 0.002 32.0 7.4 26 88-113 310-335 (428)
269 PRK08142 acetyl-CoA acetyltran 41.1 39 0.00084 34.3 4.6 43 88-134 256-298 (388)
270 TIGR02845 spore_V_AD stage V s 40.6 79 0.0017 31.2 6.4 74 287-380 57-133 (327)
271 PF01135 PCMT: Protein-L-isoas 39.4 22 0.00048 32.7 2.3 37 351-387 53-89 (209)
272 PTZ00340 O-sialoglycoprotein e 39.3 87 0.0019 31.2 6.6 53 87-144 51-109 (345)
273 COG4126 Hydantoin racemase [Am 39.3 2.4E+02 0.0052 26.3 8.8 94 48-164 123-218 (230)
274 PTZ00186 heat shock 70 kDa pre 38.5 1.3E+02 0.0028 32.8 8.4 66 86-155 333-398 (657)
275 TIGR03285 methan_mark_14 putat 37.9 73 0.0016 31.8 5.6 43 81-123 61-105 (445)
276 PRK00768 nadE NAD synthetase; 37.5 3.8E+02 0.0082 25.7 12.1 32 121-154 89-120 (268)
277 PLN03184 chloroplast Hsp70; Pr 37.4 1.2E+02 0.0026 33.3 7.9 68 84-155 343-410 (673)
278 PRK07103 polyketide beta-ketoa 37.0 84 0.0018 32.0 6.4 24 90-113 284-307 (410)
279 TIGR01991 HscA Fe-S protein as 35.9 2.2E+02 0.0049 30.6 9.6 49 85-134 291-339 (599)
280 PRK05183 hscA chaperone protei 35.8 2.1E+02 0.0046 30.9 9.5 67 85-155 307-373 (616)
281 CHL00094 dnaK heat shock prote 35.8 1.3E+02 0.0027 32.6 7.8 48 86-134 308-355 (621)
282 COG3072 CyaA Adenylate cyclase 34.3 26 0.00057 37.2 2.1 57 307-365 115-193 (853)
283 PRK06157 acetyl-CoA acetyltran 33.9 1.4E+02 0.0029 30.4 7.3 43 89-135 268-312 (398)
284 PF10895 DUF2715: Protein of u 33.8 23 0.0005 31.3 1.4 29 388-417 138-166 (176)
285 PF13344 Hydrolase_6: Haloacid 33.5 92 0.002 24.8 4.8 71 90-177 20-91 (101)
286 PRK00290 dnaK molecular chaper 33.1 1.6E+02 0.0034 31.9 8.0 68 84-155 304-371 (627)
287 PRK13411 molecular chaperone D 31.8 1.4E+02 0.0031 32.5 7.4 48 85-133 306-353 (653)
288 PF12244 DUF3606: Protein of u 31.7 46 0.001 23.8 2.5 29 320-351 20-48 (57)
289 PRK08313 acetyl-CoA acetyltran 30.7 82 0.0018 31.8 5.0 43 88-134 256-300 (386)
290 TIGR02350 prok_dnaK chaperone 30.6 1.6E+02 0.0034 31.6 7.5 68 84-155 302-369 (595)
291 PTZ00009 heat shock 70 kDa pro 29.6 1.8E+02 0.0039 31.7 7.7 66 87-155 313-378 (653)
292 TIGR01833 HMG-CoA-S_euk 3-hydr 28.3 1.4E+02 0.003 31.1 6.2 99 282-395 52-171 (454)
293 KOG1406 Peroxisomal 3-ketoacyl 28.2 59 0.0013 31.0 3.1 28 86-113 271-298 (408)
294 PF11392 DUF2877: Protein of u 27.6 1.2E+02 0.0027 24.7 4.7 46 318-363 64-109 (110)
295 PF09887 DUF2114: Uncharacteri 27.6 1.5E+02 0.0032 29.8 5.9 43 81-123 63-108 (448)
296 PTZ00400 DnaK-type molecular c 26.7 1.6E+02 0.0034 32.2 6.6 47 87-134 348-394 (663)
297 COG4401 AroH Chorismate mutase 26.2 1.9E+02 0.0042 23.7 5.3 61 85-147 20-80 (125)
298 KOG1390 Acetyl-CoA acetyltrans 25.2 1.8E+02 0.0038 28.8 5.8 67 90-162 297-371 (396)
299 KOG1389 3-oxoacyl CoA thiolase 24.2 1.5E+02 0.0033 29.1 5.2 71 90-165 323-400 (435)
300 PF03702 UPF0075: Uncharacteri 23.5 98 0.0021 31.1 4.0 54 81-134 62-125 (364)
301 COG3473 Maleate cis-trans isom 23.1 3.9E+02 0.0085 24.8 7.3 78 83-174 47-126 (238)
302 TIGR02813 omega_3_PfaA polyket 23.1 1.4E+02 0.0031 38.0 5.9 75 90-164 318-401 (2582)
303 PF06924 DUF1281: Protein of u 22.2 30 0.00065 29.3 0.1 47 16-65 63-109 (134)
304 COG2377 Predicted molecular ch 22.1 1.8E+02 0.0039 29.2 5.4 64 80-143 66-141 (371)
305 KOG1392 Acetyl-CoA acetyltrans 21.6 60 0.0013 31.3 1.9 96 287-392 349-462 (465)
306 PRK09450 cyaA adenylate cyclas 21.5 1.4E+02 0.0029 33.5 4.9 55 307-366 112-191 (830)
307 PRK00061 ribH 6,7-dimethyl-8-r 20.9 49 0.0011 28.9 1.1 48 81-130 22-69 (154)
308 COG2518 Pcm Protein-L-isoaspar 20.9 72 0.0016 29.4 2.2 34 353-386 55-88 (209)
309 PRK07591 threonine synthase; V 20.9 1.3E+02 0.0028 30.8 4.4 71 320-390 320-398 (421)
310 PF09663 Amido_AtzD_TrzD: Amid 20.8 3.2E+02 0.0068 27.2 6.6 29 86-114 131-160 (365)
311 cd03765 proteasome_beta_bacter 20.5 1.5E+02 0.0033 27.7 4.5 33 82-114 167-199 (236)
312 KOG1391 Acetyl-CoA acetyltrans 20.4 1.8E+02 0.0039 27.8 4.7 42 289-338 300-341 (396)
No 1
>PLN02854 3-ketoacyl-CoA synthase
Probab=100.00 E-value=5.2e-69 Score=546.75 Aligned_cols=413 Identities=50% Similarity=0.911 Sum_probs=373.7
Q ss_pred cccCCCCceEEEEeeeecCCCCCccCHHHHHHHHHHcCCCChHHHHHHHHHHHHcCCCCceecCCCCCCCCCCCChHHHH
Q 014606 3 HFRNPSKRVYLVDFICYKAPESLRAPISAFIEHTERSGTFDSKAVEFQTKVLERSGVGNETCLPCGTHLLPADGSLNSSM 82 (421)
Q Consensus 3 ~~~~~~~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~s~~~~~ 82 (421)
.|++++++||++..++|.|+..++++.+.+.++....+.+++++++|++||++++|+.+..+.|+.++..+++.++.+++
T Consensus 106 ~~~~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sg~g~~ty~P~~~~~~~~~~~~~~~r 185 (521)
T PLN02854 106 YWAKRSKPVYLVDFACYKPEDERKISVDSFLTMTEENGSFEDETVQFQRRISTRSGLGDETYLPRGITSRPPNLCMEEAR 185 (521)
T ss_pred HHHcCCCcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHhcCCCCccccCccccCCCCcchHHHHH
Confidence 45677889999999999999999999999999999888899999999999999999999999999888777788899999
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHH
Q 014606 83 EELKTVLFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLR 162 (421)
Q Consensus 83 ~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~ 162 (421)
+++......|++++|+++|++|+|||+||++|++++..|+++.+|+++||+++++.+||++++||+|++.||++|+++++
T Consensus 186 ~ea~~v~~~~~~~lL~kaGi~p~dID~LIv~cS~~~p~PSlAa~I~n~LGlr~~i~afdLsgmGCSggl~aL~lA~~lL~ 265 (521)
T PLN02854 186 AEAEAVMFGALDSLFSKTGVKPRDIGILIVNCSLFNPTPSLSAMIVNHYKLRTDIKSYNLGGMGCSAGLISIDLANDLLK 265 (521)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCHHHHHHHHhCCCCCceEEecccchhhhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999988888899999999999999988899999998899999999999999999
Q ss_pred ccCCCeEEEEEeccccCCCccCCCccchhhhcccccCcEEEEEecCCccccccceeeeeeeeeeecCCCccceeeeeecc
Q 014606 163 VQKNSLALVLSMESVSSNGYQGKVKYMQLANCLFRMGGAGILLSNKKEDRQRAKYELQHLVRTHLGSKDTAYKCVFQEHD 242 (421)
Q Consensus 163 ~g~~~~vLvv~~e~~s~~~~~~~d~~~~~~~~lfGDGAaA~lL~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~ 242 (421)
+++.++||||++|.+|..++.++||..++++.+|||||+|+||++.+...+.+.|++.+++.+++.+|+..++++.++.+
T Consensus 266 ~~~~~~aLVVstE~~S~~~y~g~Drs~lv~~~LFgDGAAAvlLs~~~~~~~~~k~~L~~~v~t~~~ad~~~~~~i~~~~d 345 (521)
T PLN02854 266 ANPNSYAVVVSTENITLNWYFGNDRSMLLCNCIFRMGGAAVLLSNKARDRKRSKYQLVHTVRTHKGADDKNYNCVYQRED 345 (521)
T ss_pred hCCCCeEEEEEEeeeecCCCCCCchhhhcceeeeccceeEEEEecccccccccchheeeEEEEEEeeCCCccCeEEeccC
Confidence 99999999999999996665567888777789999999999999865332234678878888899999999998888776
Q ss_pred CCCcceeeeChhhhHHHHHHHHHHHHHhhhhccchhHHHHHHHHhhhhhcCCCCCCCCCCCCCccccccEEEecCCCHHH
Q 014606 243 DEGFTGVSLSRSILQVAGEALKANMATLAAMVLPYSELVWYAVSVTWKKIWPPGRKRGPYIPDFRKAFEHFCVHAGGKAV 322 (421)
Q Consensus 243 ~~g~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~gl~~~~~~~~~~~did~~i~Hq~~~~~ 322 (421)
+.|..++.+++++|...++.++.+++++|+.+++..+.++++...+.+.|.++|+++ |.|++.+|||||++||+|+++
T Consensus 346 ~~G~~g~~lsk~l~~va~~~l~~~i~~~g~~Vl~~se~~~f~~~~i~~~L~~~gl~~--~~pd~~~didhf~iHqggr~I 423 (521)
T PLN02854 346 DKGTIGVSLARELMAVAGDALKTNITTLGPLVLPLSEQFMFFVTLVRRKLLKAKVKP--YIPDFKLAFEHFCIHAGGRAV 423 (521)
T ss_pred CCCcccccccccccchhhhhhhhhhhhccccccchHHHHHHHHHHHHHHHHHcCCCc--cCCcccccCcEEEECCCCHHH
Confidence 666556677788777767777888999999999999989888888888888889985 778888999999999999999
Q ss_pred HHHHHHHCCCChhhhHHHHHHHhccCCCccchHHHHHHHHHHcCCCCCCCeEEEEeecccccccceeeeeeccCCCC--C
Q 014606 323 IDAIKENLKLKDRDVEASKTTLYRFGNTSSSSVWYELSYLEAKGKVKKGDKIWQLAFGSGFKCNSAVWKCISNLRPE--K 400 (421)
Q Consensus 323 ~~~i~~~lgl~~~~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~g~~~~Gd~vll~~~G~G~~~~~~llr~~~~~~~~--~ 400 (421)
++.+.+.||+++++..+++.++++||||+|||+|+.|+++.++|++++||+|++++||+|++|+++++||..++.++ +
T Consensus 424 Id~v~k~LgL~~~~~e~sr~tL~rfGNTSSASI~~~L~~~~~kGrik~GD~Vl~iaFGsGft~~sav~~~~~~~~~~~~~ 503 (521)
T PLN02854 424 LDELQKNLQLSDWHMEPSRMTLHRFGNTSSSSLWYELAYTEAKGRVSAGDRVWQIAFGSGFKCNSAVWKALREIPTGEST 503 (521)
T ss_pred HHHHHHHcCCCcccccchHHHhhhcCChHhhHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhhhheeeEEeccCCccccC
Confidence 99999999999666666689999999999999999999999999999999999999999999999999999999976 7
Q ss_pred CCcchhhhccCCCCCCC
Q 014606 401 SNVWSEFILRYPMEVPD 417 (421)
Q Consensus 401 ~~~~~~~~~~~~~~~~~ 417 (421)
.|+|++||.|||+++|-
T Consensus 504 ~~~w~~~i~~yp~~~~~ 520 (521)
T PLN02854 504 GNPWADSIDRYPVKVPV 520 (521)
T ss_pred CCCchhhHhhCCCCCCC
Confidence 79999999999999873
No 2
>PLN02932 3-ketoacyl-CoA synthase
Probab=100.00 E-value=2.4e-68 Score=539.25 Aligned_cols=410 Identities=50% Similarity=0.897 Sum_probs=362.1
Q ss_pred cccCCCCceEEEEeeeecCCCCCccCHHHHHHHHHHc---CCCChHH---HHHHHHHHHHcCCCCceecCCCCCCCCCCC
Q 014606 3 HFRNPSKRVYLVDFICYKAPESLRAPISAFIEHTERS---GTFDSKA---VEFQTKVLERSGVGNETCLPCGTHLLPADG 76 (421)
Q Consensus 3 ~~~~~~~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~---~~~~~~~---~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~ 76 (421)
.++.++++||++..++|.|+..++++.+.+.++.... +.+++++ ++|++||.+++||++|++.+...+..+++.
T Consensus 60 ~~~~~~~~vyl~d~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~i~~rsGig~~t~~p~~~~~~~~~~ 139 (478)
T PLN02932 60 YLMTRPKPVYLVDFSCYLPPSHLKASIQTIMGHVRRVREAGAWKQESDYLMDFCEKILERSGLGQETYIPEGLQCLPLQQ 139 (478)
T ss_pred HHhcCCCcEEEEeeeeecCcccccccHHHHHHHHHhhcccCCCCccchhHHHHHHHHHHHcCCCCceeeccccccCCHHH
Confidence 3566688999999999999999999999999988665 5677766 999999999999999999887766555566
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHH
Q 014606 77 SLNSSMEELKTVLFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISL 156 (421)
Q Consensus 77 s~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~ 156 (421)
++..+.+++.+|+.+|+++||+++|++|+|||+||++|++++..|+++.+|+++||+++++.+||++++||+|++.||++
T Consensus 140 ~~~~~~~ea~~la~~Aa~~aL~~agi~p~dId~lIv~tst~~~~Pslaa~V~~~lGlr~~i~~fdL~gmGCSggl~aL~l 219 (478)
T PLN02932 140 NLAVSRKETEEVIIGAVDNLFRNTGISPSDIGILVVNSSTFNPTPSLSSILVNKFKLRDNIKSLNLGGMGCSAGVIAIDA 219 (478)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCCCCcHHHHHHHHhCCCCCceEEEeccchhhhHHHHHHH
Confidence 78889999999999999999999999999999999998766799999999999999987899999998899999999999
Q ss_pred HHHHHHccCCCeEEEEEeccccCCCccCCCccchhhhcccccCcEEEEEecCCccccccceeeeeeeeeeecCCCcccee
Q 014606 157 AKDLLRVQKNSLALVLSMESVSSNGYQGKVKYMQLANCLFRMGGAGILLSNKKEDRQRAKYELQHLVRTHLGSKDTAYKC 236 (421)
Q Consensus 157 A~~li~~g~~~~vLvv~~e~~s~~~~~~~d~~~~~~~~lfGDGAaA~lL~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~ 236 (421)
|++++++++.++||||++|.+|..++..+++..++++.+|||||+|+||++.+.....+.|++.+...++..+|+..+++
T Consensus 220 A~~ll~~~~~~~aLVVstE~~S~~~~~~d~r~~l~t~~LFgDGAAAvlLs~~~~~~~~~~~~L~~~v~t~~~ad~~~~~~ 299 (478)
T PLN02932 220 AKSLLQVHRNTYALVVSTENITQNLYLGNNKSMLVTNCLFRIGGAAILLSNRSRDRKRAKYELVHTVRVHTGADDRSYEC 299 (478)
T ss_pred HHHHHHcCCCCeEEEEEEeecccccCCCcchhhhccceeecccceEEEEecccccccCcceEEEeeeeeeeccCCCcccc
Confidence 99999999999999999999999886655666667899999999999999865321224678877778888999999999
Q ss_pred eeeeccCCCcceeeeChhhhHHHHHHHHHHHHHhhhhccchhHHHHHHHHhhhhhcCCCCCCCCCCCCCccccccEEEec
Q 014606 237 VFQEHDDEGFTGVSLSRSILQVAGEALKANMATLAAMVLPYSELVWYAVSVTWKKIWPPGRKRGPYIPDFRKAFEHFCVH 316 (421)
Q Consensus 237 ~~~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~gl~~~~~~~~~~~did~~i~H 316 (421)
+.++.++.|..++.+++++|...+++++.++...++.+++..+.+++++..+.+.+.+...+. +.+++..+||||++|
T Consensus 300 v~~~~d~~G~~g~~Lsk~lp~~~~~al~~ni~~~~p~v~p~~e~~~~~~~~~~~~~~k~~~~~--~~~~~~~~id~f~iH 377 (478)
T PLN02932 300 ATQEEDEDGIVGVSLSKNLPMVAARTLKINIATLGPLVLPLSEKFHFFVRFVKKKFFNPKLKH--YIPDFKLAFEHFCIH 377 (478)
T ss_pred ceeecccCCcceeeECccchHHHHHHHhhhhhccccccccchhhhHHHHHHhHHHHHHHHhhc--CcHhHHhhhceEEEc
Confidence 888877677778899999999999999999988888888877878877776665443222221 445666899999999
Q ss_pred CCCHHHHHHHHHHCCCChhhhHHHHHHHhccCCCccchHHHHHHHHHHcCCCCCCCeEEEEeecccccccceeeeeeccC
Q 014606 317 AGGKAVIDAIKENLKLKDRDVEASKTTLYRFGNTSSSSVWYELSYLEAKGKVKKGDKIWQLAFGSGFKCNSAVWKCISNL 396 (421)
Q Consensus 317 q~~~~~~~~i~~~lgl~~~~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~g~~~~Gd~vll~~~G~G~~~~~~llr~~~~~ 396 (421)
|+|+++++.+.+.||++++++.+|+.++++||||+|+|+|+.|+++.++|++++||+|++++||+|++|+++++|...++
T Consensus 378 qggr~IIdav~k~LgL~~~~~e~s~~tL~rfGNTSSaSI~~~L~~~ea~grik~Gd~vl~iaFGsGf~~~s~vw~~~~~~ 457 (478)
T PLN02932 378 AGGRALIDEMEKNLHLTPLDVEASRMTLHRFGNTSSSSIWYELAYTEAKGRMKKGDRIWQIALGSGFKCNSSVWVALRNV 457 (478)
T ss_pred cCCHHHHHHHHHHcCCChHHHHHHHHHHHHhCChhhhHHHHHHHHHHHcCCCCCCCEEEEEEEeccHHHHHHHHHHhcCC
Confidence 99999999999999999988888899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcchhhhccCCCC
Q 014606 397 RPEKSNVWSEFILRYPME 414 (421)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~ 414 (421)
.+++.|+|++||.|||++
T Consensus 458 ~~~~~~~w~~~i~~yp~~ 475 (478)
T PLN02932 458 KPSANNPWEDCLHKYPVE 475 (478)
T ss_pred CCcCCCCchhhHhhCCCC
Confidence 998889999999999996
No 3
>PLN02192 3-ketoacyl-CoA synthase
Probab=100.00 E-value=4e-67 Score=531.82 Aligned_cols=403 Identities=51% Similarity=0.914 Sum_probs=355.2
Q ss_pred cccCCCCceEEEEeeeecCCCCCccCHHHHHHHHHHcCCCChHHHHHHHHHHHHcCCCCceecCCCCCCCCCCCChHHHH
Q 014606 3 HFRNPSKRVYLVDFICYKAPESLRAPISAFIEHTERSGTFDSKAVEFQTKVLERSGVGNETCLPCGTHLLPADGSLNSSM 82 (421)
Q Consensus 3 ~~~~~~~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~s~~~~~ 82 (421)
.|+.+++.||++..++|.|+..++++.+.+.++....+.+++++++|++++++++|+.+..+.|+.++..+++.++.++.
T Consensus 94 ~~~~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sglg~~t~~p~~~~~~~~~~~~~~~~ 173 (511)
T PLN02192 94 YFLTRPRPVYLVDFSCYKPDDSRKCTRKIFMDRSKLTGSFTEENLEFQRKILERSGLGESTYLPEAVLNVPPNPCMAEAR 173 (511)
T ss_pred HHHcCCCcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHhcCCCCcccCChhhccCCCCccHHHHH
Confidence 35667889999999999999999999999999999888899999999999999999999999999888778888999999
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHH
Q 014606 83 EELKTVLFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLR 162 (421)
Q Consensus 83 ~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~ 162 (421)
+++..+...|+++||+++|++|+|||+||++|++++..|+++.+|+++||+++++.+||++++||+|++.||++|+++++
T Consensus 174 ~Ea~~~~~~Aa~~aL~kaGi~p~DIDiLIv~~S~~~~~PSlaa~I~n~lGlr~~i~afdLsgmGCSggl~aLdlA~~lL~ 253 (511)
T PLN02192 174 KEAETVMFGAIDQLLAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNILSYNLGGMGCSAGLISIDLAKHLLQ 253 (511)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCchHHHHHHHHhCCCCCceEEEcccchhhhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998889999999999999999987899999998899999999999999999
Q ss_pred ccCCCeEEEEEeccccCCCccCCCccchhhhcccccCcEEEEEecCCccccccceeeeeeeeeeecCCCccceeeeeecc
Q 014606 163 VQKNSLALVLSMESVSSNGYQGKVKYMQLANCLFRMGGAGILLSNKKEDRQRAKYELQHLVRTHLGSKDTAYKCVFQEHD 242 (421)
Q Consensus 163 ~g~~~~vLvv~~e~~s~~~~~~~d~~~~~~~~lfGDGAaA~lL~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~ 242 (421)
+++.++||||++|.+|..++.++||...+.+.+|||||+|+||++.+.....+.+++.+.+.++.++++..++++.++++
T Consensus 254 a~~~~~aLVVstE~~S~n~y~g~drs~lv~n~LFgDGAaAvLLs~~~~~~~~~k~~L~~~vrt~~~~dd~~~~~v~~~ed 333 (511)
T PLN02192 254 VHPNSYALVISMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNKRSDRRRSKYQLVHTVRTHKGADDKCFACVTQEED 333 (511)
T ss_pred cCCCCeEEEEEEEeccccCCCCCCHHHHhccccccccceEEEEeccccccccccceeeeeEEEEecCChhhccceecccc
Confidence 99999999999999997665667888777779999999999999854322224577777677888889888888888777
Q ss_pred CCCcceeeeChhhhHHHHHHHHHHHHHhhhhc------------cchhHHHHHHHHhhhhhcCCCCCCCCCCCCCccccc
Q 014606 243 DEGFTGVSLSRSILQVAGEALKANMATLAAMV------------LPYSELVWYAVSVTWKKIWPPGRKRGPYIPDFRKAF 310 (421)
Q Consensus 243 ~~g~~~~~l~~~~p~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~i~~~l~~~gl~~~~~~~~~~~di 310 (421)
.+|..++.+++++|...+..++..++.+++.+ |.++++|+++++. |.|++..+|
T Consensus 334 ~~g~~g~~Lskdl~~vag~al~~ni~~l~p~vlp~~e~~~~~~~m~gr~vfk~~~~~--------------~~p~~~~~I 399 (511)
T PLN02192 334 SAGKIGVSLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKLKP--------------YIPDFKLAF 399 (511)
T ss_pred cccceeeEecchhhhhhhhhhhhhhhhcccccCccchhhceeEEEcChHHHHHHhhh--------------ccHHHHHhh
Confidence 77888999999999988877766666555543 2345555544321 334445789
Q ss_pred cEEEecCCCHHHHHHHHHHCCCChhhhHHHHHHHhccCCCccchHHHHHHHHHHcCCCCCCCeEEEEeecccccccceee
Q 014606 311 EHFCVHAGGKAVIDAIKENLKLKDRDVEASKTTLYRFGNTSSSSVWYELSYLEAKGKVKKGDKIWQLAFGSGFKCNSAVW 390 (421)
Q Consensus 311 d~~i~Hq~~~~~~~~i~~~lgl~~~~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~g~~~~Gd~vll~~~G~G~~~~~~ll 390 (421)
|||++||+|+++++.+.+.||++++...+|+.++++||||+|+|+|+.|+++.++|++++||+|++++||+|++|+++++
T Consensus 400 dhf~iHqggr~IId~v~k~LgL~~~~~e~sr~tL~rfGNTSSaSI~~aL~~~eakgrik~GDrVl~iaFGsGf~~~sav~ 479 (511)
T PLN02192 400 EHFCIHAGGRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSAVW 479 (511)
T ss_pred ceEeeccCCHHHHHHHHHHcCCCchhhhHHHHHHhHcCChHHhHHHHHHHHHHHcCCCCCCCEEEEEEEcchHhhhhhhe
Confidence 99999999999999999999999876666789999999999999999999999999999999999999999999999999
Q ss_pred eeeccCCCCCC-CcchhhhccCCCCCCCCC
Q 014606 391 KCISNLRPEKS-NVWSEFILRYPMEVPDIL 419 (421)
Q Consensus 391 r~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 419 (421)
||..++.+++. |+|++||.|||+++|.+.
T Consensus 480 ~~~~~~~~~~~~~~w~~~i~~yp~~~~~~~ 509 (511)
T PLN02192 480 KALRTVNPAKEKNPWMDEIHEFPVDVPKVS 509 (511)
T ss_pred eeecccCCcccCCCchhhHHhCCCCCCCCC
Confidence 99999998644 999999999999999864
No 4
>PLN02377 3-ketoacyl-CoA synthase
Probab=100.00 E-value=2.9e-66 Score=526.85 Aligned_cols=410 Identities=51% Similarity=0.965 Sum_probs=355.6
Q ss_pred cccCCCCceEEEEeeeecCCCCCccCHHHHHHHHHHcCCCChHHHHHHHHHHHHcCCCCceecCCCCCCCCCCCChHHHH
Q 014606 3 HFRNPSKRVYLVDFICYKAPESLRAPISAFIEHTERSGTFDSKAVEFQTKVLERSGVGNETCLPCGTHLLPADGSLNSSM 82 (421)
Q Consensus 3 ~~~~~~~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~s~~~~~ 82 (421)
.++.++++||++..++|.|+..++++.+.+.++....+.+++++++++++|++++||.+..+.|+..+..+++.++..+.
T Consensus 90 ~~~~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ri~~~sgig~~t~~p~~~~~~~~~~~~~~~~ 169 (502)
T PLN02377 90 YIMTRPRPVYLVDYSCYRAPDHLKAPFARFMEHSRLTGDFDDSSLEFQRKILERSGLGEDTYVPEAMHYIPPRPSMAAAR 169 (502)
T ss_pred HHHcCCCCEEEEeeeeecCCccccccHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCCCccccCchhccCCccchHHHHH
Confidence 35667889999999999999999999999999999888899999999999999999999777787766667778899999
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHH
Q 014606 83 EELKTVLFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLR 162 (421)
Q Consensus 83 ~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~ 162 (421)
+++.+++..|+++||+++|++|+|||+||++||+++..|+++.+|+++||+++++.+||++++||+|++.||++|+++++
T Consensus 170 ~ea~~l~~~A~~~aL~kaGi~p~dID~LVv~cS~~~~~PSlaa~V~~~LGlr~~v~afdL~gmGCsggl~aL~lA~~ll~ 249 (502)
T PLN02377 170 EEAEQVMFGALDNLFANTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAVDLAKDMLQ 249 (502)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhCCCCCCeEEecccchhhHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999877888899999999999999998899999998899999999999999999
Q ss_pred ccCCCeEEEEEeccccCCCccCCCccchhhhcccccCcEEEEEecCCccccccceeeeeeeeeeecCCCccceeeeeecc
Q 014606 163 VQKNSLALVLSMESVSSNGYQGKVKYMQLANCLFRMGGAGILLSNKKEDRQRAKYELQHLVRTHLGSKDTAYKCVFQEHD 242 (421)
Q Consensus 163 ~g~~~~vLvv~~e~~s~~~~~~~d~~~~~~~~lfGDGAaA~lL~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~ 242 (421)
+++.++||||++|.+|..++..+++..++++.+|||||+|+||++.+...+.+.+++.+++.++..++++.++++.++++
T Consensus 250 ~~~~~~aLVVstE~~S~~~~~~d~~s~lv~n~LFgDGAaAvlLs~~~~~~~~a~~~l~~iv~t~~~~d~~~~~~i~~~~d 329 (502)
T PLN02377 250 VHRNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKSRDKRRSKYKLVHVVRTHRGADDKAFRCVYQEQD 329 (502)
T ss_pred cCCCCEEEEEEEeccccccCCCCCccccccceeeccccEEEEEecccccccccccccceEEEEEEEEcCCccceeeeccc
Confidence 99999999999999998875544455566789999999999999854322223456556777888888888888887766
Q ss_pred CCCcceeeeChhhhHHHHHHHHHHHHHhhhhccchh-HHHHHHHHhhhhhcCCCCCCCCCCCCCccccccEEEecCCCHH
Q 014606 243 DEGFTGVSLSRSILQVAGEALKANMATLAAMVLPYS-ELVWYAVSVTWKKIWPPGRKRGPYIPDFRKAFEHFCVHAGGKA 321 (421)
Q Consensus 243 ~~g~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~l~~~gl~~~~~~~~~~~did~~i~Hq~~~~ 321 (421)
+.|..++.+++++|.+.++.++.+++++++.+++.. +++.++...+++.+.+ .+++ +.|+..+|||||++||+|++
T Consensus 330 ~~G~~g~~ls~dl~~v~g~~l~~~i~~lg~~vl~~se~~~~~a~~~~~~~~~~-~l~~--~~p~~~~didhf~iHqggr~ 406 (502)
T PLN02377 330 DAGKTGVSLSKDLMAIAGEALKTNITTLGPLVLPISEQLLFFATLVVKKLFNK-KMKP--YIPDFKLAFDHFCIHAGGRA 406 (502)
T ss_pred cCCCCCCCCCcchhhHhhHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHH-HHhh--ccCCcHhhcCEEEECCCCHH
Confidence 566667788889998888888999999999887743 4555666666554432 1221 33344689999999999999
Q ss_pred HHHHHHHHCCCChhhhHHHHHHHhccCCCccchHHHHHHHHHHcCCCCCCCeEEEEeecccccccceeeeeeccCCCCCC
Q 014606 322 VIDAIKENLKLKDRDVEASKTTLYRFGNTSSSSVWYELSYLEAKGKVKKGDKIWQLAFGSGFKCNSAVWKCISNLRPEKS 401 (421)
Q Consensus 322 ~~~~i~~~lgl~~~~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~g~~~~Gd~vll~~~G~G~~~~~~llr~~~~~~~~~~ 401 (421)
+++.+.+.||+++++..+|+.++++||||+|+|+|+.|+++.++|++++||+|++++||+|++|+++++||..++.+++.
T Consensus 407 IId~v~k~LgL~~~~~e~sr~tL~r~GNTSSaSI~~aL~~~~~~grik~Gd~VlliaFGsGf~~~s~v~~~~~~~~~~~~ 486 (502)
T PLN02377 407 VIDELEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMRKGNRVWQIAFGSGFKCNSAVWEALRHVKPSNN 486 (502)
T ss_pred HHHHHHHHcCCCcccchHHHHHHHhcCCchhhHHHHHHHHHHHcCCCCCCCeEEEEEEccccEeeeEEEEEecCCCCCCC
Confidence 99999999999987777778999999999999999999999999999999999999999999999999999999999888
Q ss_pred CcchhhhccCCCCC
Q 014606 402 NVWSEFILRYPMEV 415 (421)
Q Consensus 402 ~~~~~~~~~~~~~~ 415 (421)
|+|++||.|||+++
T Consensus 487 ~~w~~~i~~yp~~~ 500 (502)
T PLN02377 487 SPWEDCIDKYPVKL 500 (502)
T ss_pred CCchhhHhhCCCcc
Confidence 99999999999863
No 5
>PLN00415 3-ketoacyl-CoA synthase
Probab=100.00 E-value=3.6e-63 Score=495.59 Aligned_cols=410 Identities=43% Similarity=0.827 Sum_probs=361.4
Q ss_pred ccCCCCceEEEEeeeecCCCCCccCHHHHHHHHHHcCCCChHHHHHHHHHHHHcCCCCceecCCCCCCCCCCCChHHHHH
Q 014606 4 FRNPSKRVYLVDFICYKAPESLRAPISAFIEHTERSGTFDSKAVEFQTKVLERSGVGNETCLPCGTHLLPADGSLNSSME 83 (421)
Q Consensus 4 ~~~~~~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~s~~~~~~ 83 (421)
++.+++.||++..++|.|+..++++.+.+.+.....+.+++++++|+.+|.+++||.+..+.++..+..++..++.+.++
T Consensus 53 ~~~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~F~~~i~~rSGlg~et~~p~~~~~~~~~~~~~~~~~ 132 (466)
T PLN00415 53 STTRSKPVYLVDFSCHQPTDSCKISSETFFNMAKGAQLYTEETIQFMTRILNRSGLGDDTYSPRCMLTSPPTPSMYEARH 132 (466)
T ss_pred HHcCCCcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCCCCeeeCCccccCCCCCChhhhHH
Confidence 45568899999999999999899999999999988888999999999999999999998888877666666667666666
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHHc
Q 014606 84 ELKTVLFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLRV 163 (421)
Q Consensus 84 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~~ 163 (421)
++..-...|+++||+++|++|+|||+||++|++++..|+++.+|+++||+++++.++|++++||+|++.||++|++++++
T Consensus 133 e~em~i~~A~~~aL~~aGi~p~dID~LIvs~T~~~~~Pslaa~l~~~LGLr~~v~~~dL~gmGCsggv~aL~lA~~ll~a 212 (466)
T PLN00415 133 ESELVIFGALNSLFKKTGIEPREVGIFIVNCSLFNPNPSLSSMIVNRYKLKTDVKTYNLSGMGCSAGAISVDLATNLLKA 212 (466)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEECcCCCCCchHHHHHHHHhCCCCCceEEEeccccchHHHHHHHHHHHHHHh
Confidence 66666666888999999999999999997777777899999999999999989999999978999999999999999999
Q ss_pred cCCCeEEEEEeccccCCCccCCCccchhhhcccccCcEEEEEecCCccccccceeeeeeeeeeecCCCccceeeeeeccC
Q 014606 164 QKNSLALVLSMESVSSNGYQGKVKYMQLANCLFRMGGAGILLSNKKEDRQRAKYELQHLVRTHLGSKDTAYKCVFQEHDD 243 (421)
Q Consensus 164 g~~~~vLvv~~e~~s~~~~~~~d~~~~~~~~lfGDGAaA~lL~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~ 243 (421)
++.++||||++|.+|..+++++|+..++++.+|||||+|+||++++.....+.|++.+++.++.+.+...+.++.+..++
T Consensus 213 ~~~~~aLVVs~E~~S~~~~~~~dr~~lv~n~LFgDGAAAvlLs~~~~~~~~~~~~L~~~vrt~~~~~d~~~~~~~~~~d~ 292 (466)
T PLN00415 213 NPNTYAVIVSTENMTLSMYRGNDRSMLVPNCLFRVGGAAVMLSNRSQDRVRSKYELTHIVRTHKGSSDKHYTCAEQKEDS 292 (466)
T ss_pred CCCCEEEEEEEecccccccCCCcHhHhccceeecccceEEEEecCcccccCccceeeeEEEecCCCChhhhcceeeeecC
Confidence 99999999999999987766778877778899999999999998654333357888777777776666677777788888
Q ss_pred CCcceeeeChhhhHHHHHHHHHHHHHhhhhccchhHHHHHHHHhhhhhcCCCCCCCCCCCCCccccccEEEecCCCHHHH
Q 014606 244 EGFTGVSLSRSILQVAGEALKANMATLAAMVLPYSELVWYAVSVTWKKIWPPGRKRGPYIPDFRKAFEHFCVHAGGKAVI 323 (421)
Q Consensus 244 ~g~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~gl~~~~~~~~~~~did~~i~Hq~~~~~~ 323 (421)
.|..++.+++++|.+.+++++.+++.+++.+.+..+.+++....+.+.+.+..+++ |.|++..-++||++|+++++++
T Consensus 293 ~G~~gv~Lsk~lp~va~~~l~~ni~~l~p~vlp~~e~~~~~~~~i~~~~~~~~~~~--~~pd~~~~~~hf~iHpGGraVL 370 (466)
T PLN00415 293 KGIVGVALSKELTVVAGDTLKTNLTALGPLVLPLSEKLRFILFLVKSKLFRLKVSP--YVPDFKLCFKHFCIHAGGRALL 370 (466)
T ss_pred CCcceEEEChHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHhhhhhhccCCC--CCCCccccceeEEecCCcHHHH
Confidence 88879999999999999999999999999988888888888777776665445553 6676544599999999999999
Q ss_pred HHHHHHCCCChhhhHHHHHHHhccCCCccchHHHHHHHHHHcCCCCCCCeEEEEeecccccccceeeeeeccCCCCCC--
Q 014606 324 DAIKENLKLKDRDVEASKTTLYRFGNTSSSSVWYELSYLEAKGKVKKGDKIWQLAFGSGFKCNSAVWKCISNLRPEKS-- 401 (421)
Q Consensus 324 ~~i~~~lgl~~~~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~g~~~~Gd~vll~~~G~G~~~~~~llr~~~~~~~~~~-- 401 (421)
+.+.+.||++++++.+|+.++++||||+|+|+++.|+++.++++.++||++++++||+|+++.++++|+..++.++..
T Consensus 371 dave~~LgL~~~~le~Sr~vL~r~GN~SSsSV~yvL~~~~~~~~~~~Gdrvl~iaFGpGf~~es~v~~~~~~~~~~~~~~ 450 (466)
T PLN00415 371 DAVEKGLGLSEFDLEPSRMTLHRFGNTSSSSLWYELAYVEAKCRVKRGDRVWQLAFGSGFKCNSIVWRALRTIPANESLV 450 (466)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHhCCchhhhHHHHHHHHHhhccCCCCCEEEEEEEcCcchhhHhHHHHhccCCcccccC
Confidence 999999999999999999999999999999999999999998889999999999999999999999999999988654
Q ss_pred -CcchhhhccCCCCC
Q 014606 402 -NVWSEFILRYPMEV 415 (421)
Q Consensus 402 -~~~~~~~~~~~~~~ 415 (421)
|+|++||+|||+++
T Consensus 451 ~~~w~~~i~~yp~~~ 465 (466)
T PLN00415 451 GNPWGDSVHKYPVHV 465 (466)
T ss_pred CCCchhhHHhCCCCC
Confidence 99999999999964
No 6
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=100.00 E-value=9.1e-62 Score=468.22 Aligned_cols=317 Identities=20% Similarity=0.301 Sum_probs=273.8
Q ss_pred CceEEEEeeeecCCCCCccCHHHHHHHHHHcCCCChHHHHHHHHHHHHcCCCCceecCCCCCCCCCCCChHHHHHHHHHH
Q 014606 9 KRVYLVDFICYKAPESLRAPISAFIEHTERSGTFDSKAVEFQTKVLERSGVGNETCLPCGTHLLPADGSLNSSMEELKTV 88 (421)
Q Consensus 9 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~s~~~~~~~~~~l 88 (421)
++++|.|+|.|+|++ +++|+++++.... ++ +||..++||++||++.+++ + ..+|
T Consensus 2 ~~a~i~g~G~~lP~~--~vtn~d~e~~~~t----sd------ewI~~rtGir~R~~a~~~e-------~-------~s~l 55 (323)
T COG0332 2 MNAKILGIGSYLPER--VVTNADLEKRVDT----SD------EWIETRTGIRERRIAADDE-------T-------TSDL 55 (323)
T ss_pred CcceEEEEEeecCCc--ccChHHHHhccCC----Cc------ceeeeecCCceeeecCCCc-------c-------HHHH
Confidence 578999999999999 9999999965542 33 6999999999999987542 2 2479
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEec-cCCCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHHccCCC
Q 014606 89 LFSIVQDLFSKHKINPKSIDILITNC-SVSCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLRVQKNS 167 (421)
Q Consensus 89 a~~Aa~~aL~~ag~~~~~Id~li~~s-s~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~~g~~~ 167 (421)
+++||++||+++|++|+|||+||++| +|++.+|++|+.||++||+. ++.+||++ .+|+|++.||.+|.++|++|.++
T Consensus 56 a~~Aa~~AL~~Agi~~~dIDlII~aT~tpd~~~Ps~A~~vq~~LG~~-~~~afDl~-aaCsgf~yaL~~A~~~i~sG~~k 133 (323)
T COG0332 56 AVEAARKALEDAGISPDDIDLIIVATSTPDHLFPSTACLVQARLGLG-GAPAFDLQ-AACSGFLYALSVADGLIRSGGYK 133 (323)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEcCCcccCCChHHHHHHHHhCCC-Ccceeech-hhhHHHHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999999997 88999999999999999999 59999999 69999999999999999999999
Q ss_pred eEEEEEeccccCCCccCCCccchhhhcccccCcEEEEEecCCccccccceeeeeeeeeeecCCCccceeeeeeccCCCcc
Q 014606 168 LALVLSMESVSSNGYQGKVKYMQLANCLFRMGGAGILLSNKKEDRQRAKYELQHLVRTHLGSKDTAYKCVFQEHDDEGFT 247 (421)
Q Consensus 168 ~vLvv~~e~~s~~~~~~~d~~~~~~~~lfGDGAaA~lL~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~g~~ 247 (421)
+||||++|++|+.+ +++||. ++.+|||||+|+||++.+... +++.+.+.+|+.+++.++.+......
T Consensus 134 ~vLVVg~e~~S~~l-d~~dR~---t~vlFgDGAgAvvl~~~~~~~--------~i~~~~l~sdg~~~~~l~~~~~~~~~- 200 (323)
T COG0332 134 NVLVVGAETLSRIL-DWTDRD---TCVLFGDGAGAVVLEATEDDN--------GILDTDLGSDGSQGDLLYLPGGGSAT- 200 (323)
T ss_pred EEEEEehhHhhccC-CHhhcc---ceEEEcCCceEEEEecCCCCc--------CeeeeeeeccccCCCeeeccCCCCcc-
Confidence 99999999999987 667887 789999999999999987332 46678888999888666554321110
Q ss_pred eeeeChhhhHHHHHHHHHHHHHhhhhccchhHHHHHHHHhhhhh----cCCCCCCCCCCCCCccccccEEEecCCCHHHH
Q 014606 248 GVSLSRSILQVAGEALKANMATLAAMVLPYSELVWYAVSVTWKK----IWPPGRKRGPYIPDFRKAFEHFCVHAGGKAVI 323 (421)
Q Consensus 248 ~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~----l~~~gl~~~~~~~~~~~did~~i~Hq~~~~~~ 323 (421)
..... ..+.+.|.++++|+++++.+++. |+++|++ .+|||||+|||+|.+++
T Consensus 201 ----~~~~~------------~~~~~~m~Gr~vfk~av~~~~~~~~~~L~~~~l~--------~~dId~~vpHQan~ri~ 256 (323)
T COG0332 201 ----PKEES------------GGGLLVMDGREVFKFAVRAMPKAIEEVLEKAGLT--------PEDIDWFVPHQANLRII 256 (323)
T ss_pred ----ccccc------------cccceeeccHHHHHHHHHHHHHHHHHHHHHcCCC--------HHHCCEEccccccHHHH
Confidence 00000 01234566789999999888754 5689998 49999999999999999
Q ss_pred HHHHHHCCCChhhhHHHHHHHhccCCCccchHHHHHHHHHHcCCCCCCCeEEEEeecccccccceeeeee
Q 014606 324 DAIKENLKLKDRDVEASKTTLYRFGNTSSSSVWYELSYLEAKGKVKKGDKIWQLAFGSGFKCNSAVWKCI 393 (421)
Q Consensus 324 ~~i~~~lgl~~~~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~g~~~~Gd~vll~~~G~G~~~~~~llr~~ 393 (421)
+.++++||+|++|+. .++++||||++||+|++|++++++|++++||.++|.+||+|++|+++++||.
T Consensus 257 ~~i~~~l~~~~~k~~---~~~~~yGNtsaAsiplaL~~~~~~g~ik~Gd~ill~~fG~Gltwg~~~~r~~ 323 (323)
T COG0332 257 EAIAKKLGIPEEKVV---VTVDKYGNTSAASIPLALDEALREGRIKPGDLVLLEAFGGGLTWGAALVRWG 323 (323)
T ss_pred HHHHHHcCCCHHHHh---hHHHHhcccccchHHHHHHHHhhhCCCCCCCEEEEEeecCcceeeeEEEEeC
Confidence 999999999999994 8999999999999999999999999999999999999999999999999984
No 7
>PLN03172 chalcone synthase family protein; Provisional
Probab=100.00 E-value=2.9e-52 Score=418.13 Aligned_cols=348 Identities=17% Similarity=0.215 Sum_probs=268.4
Q ss_pred CceEEEEeeeecCCCCCccCHHHHHHHHHHcCCC-C-hHHHHHHHHHHHHcCCCCceecCC-C---CCCC-------CCC
Q 014606 9 KRVYLVDFICYKAPESLRAPISAFIEHTERSGTF-D-SKAVEFQTKVLERSGVGNETCLPC-G---THLL-------PAD 75 (421)
Q Consensus 9 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~-~-~~~~~~~~~i~~~~GI~~R~~~~~-~---~~~~-------~~~ 75 (421)
.++.|.++|+.+|++ .++|+|+.+...+.+.. + ++..+++.+|++++||++||++.+ + +... ..+
T Consensus 15 ~~~~I~~igta~P~~--~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~ 92 (393)
T PLN03172 15 GPATILAIGKATPAN--CVSQADYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYMHLTEEILKENPNMCAYMAPSLD 92 (393)
T ss_pred CCeEEEEEEecCCCc--cccHHHHHHHHHHHhcccCchHHHHHHHHHHHhcCCCceeEeccchhhhhCccccccCCCCHH
Confidence 468899999999999 99999999988754311 1 222334778999999999998542 1 1111 112
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCCcee-eeeeCCcchHHHHHH
Q 014606 76 GSLNSSMEELKTVLFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSNVRS-FHLSGMGCSAGILSI 154 (421)
Q Consensus 76 ~s~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~~~~-~~i~~~~C~g~~~al 154 (421)
..+..+.+.+.+|+++|+++||+++|++++|||+||++|++++..|+.+.+|+++||+++++.+ ++++ +||+|++.||
T Consensus 93 ~r~~~~~~~a~~La~~Aa~~aL~~ag~~~~dId~ii~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~~~~-~gC~g~~~aL 171 (393)
T PLN03172 93 ARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLKPSVKRFMMYQ-QGCFAGGTVL 171 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCcCchHHHHHHHHhCCCCCceEEeeeC-CchHHHHHHH
Confidence 2366788899999999999999999999999999999886665699999999999999976755 5667 7999999999
Q ss_pred HHHHHHHHccCCCeEEEEEeccccCCCccCCC--ccchhhhcccccCcEEEEEecCCccc-cccceeeeeeeeee-ecCC
Q 014606 155 SLAKDLLRVQKNSLALVLSMESVSSNGYQGKV--KYMQLANCLFRMGGAGILLSNKKEDR-QRAKYELQHLVRTH-LGSK 230 (421)
Q Consensus 155 ~~A~~li~~g~~~~vLvv~~e~~s~~~~~~~d--~~~~~~~~lfGDGAaA~lL~~~~~~~-~~~~~~~~~~~~~~-~~t~ 230 (421)
++|..++++++.++||||++|.+|..++++.| .+++++..+|||||+|+||++++... +.+.|++.+..... ..++
T Consensus 172 ~~A~~~~~~~~~~~vLVV~~E~~S~~~~~~~d~~~~~~v~~~LFGDGAaAvVl~~~~~~~~~~~~~~i~~~~~~~~~~t~ 251 (393)
T PLN03172 172 RLAKDLAENNAGSRVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIIGADPDTKIERPLFEIVSAAQTILPDSD 251 (393)
T ss_pred HHHHHHHHcCCCCeEEEEEEehhhhhhcccccccHHhhhccchhcCceEEEEEecCCCCcccCceeEEeeeccEEecCCc
Confidence 99999999999999999999999965534334 33456789999999999999865431 12345655432222 2333
Q ss_pred CccceeeeeeccCCCcceeeeChhhhHHHHHHHHHHHHHhhhhccchhHHHHHHHHhhhhhcCCCCCCCCCCCCCccccc
Q 014606 231 DTAYKCVFQEHDDEGFTGVSLSRSILQVAGEALKANMATLAAMVLPYSELVWYAVSVTWKKIWPPGRKRGPYIPDFRKAF 310 (421)
Q Consensus 231 ~~~~~~~~~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~gl~~~~~~~~~~~di 310 (421)
+.....+. ..| ..+.+.+++|....+.+.. .+.+.|.++|++ ..||
T Consensus 252 ~~~~~~i~----~~G-~~~~l~~~vp~~~~~~i~~---------------------~~~~~L~~~gl~--------~~di 297 (393)
T PLN03172 252 GAIDGHLR----EVG-LTFHLLKDVPGLISKNIEK---------------------SLVEAFAPIGIN--------DWNS 297 (393)
T ss_pred ccccceEE----cCC-cEEEEechHHHHHHHHHHH---------------------HHHHHhhhcCCC--------cccc
Confidence 32221111 122 2455667777655433222 223456677887 3899
Q ss_pred cEEEecCCCHHHHHHHHHHCCCChhhhHHHHHHHhccCCCccchHHHHHHHHH----HcCCCCCC---CeEEEEeecccc
Q 014606 311 EHFCVHAGGKAVIDAIKENLKLKDRDVEASKTTLYRFGNTSSSSVWYELSYLE----AKGKVKKG---DKIWQLAFGSGF 383 (421)
Q Consensus 311 d~~i~Hq~~~~~~~~i~~~lgl~~~~~~~s~~~l~~~Gn~~sasi~i~L~~~~----~~g~~~~G---d~vll~~~G~G~ 383 (421)
++|++||+|+++++.+.++||++++++.+|+.++++||||+|||+|+.|++++ ++|++++| |++++++||+|+
T Consensus 298 ~~~~~Hqgg~~Il~~v~~~Lgl~~~~~~~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~g~~~~G~~~~~~ll~afGpG~ 377 (393)
T PLN03172 298 IFWIAHPGGPAILDQVEIKLDLKEEKLRATRHVLSDYGNMSSACVLFILDEMRKKSIEEGKGSTGEGLEWGVLFGFGPGL 377 (393)
T ss_pred ceEEecCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCccHHhHHHHHHHHHHhhhhhcCCCCCCCCcceEEEEEeCCcc
Confidence 99999999999999999999999999998889999999999999999999987 35777777 889999999999
Q ss_pred cccceeeeee
Q 014606 384 KCNSAVWKCI 393 (421)
Q Consensus 384 ~~~~~llr~~ 393 (421)
+|++++|||.
T Consensus 378 t~~~~ll~~~ 387 (393)
T PLN03172 378 TVETVVLHSV 387 (393)
T ss_pred eeeeeeeEec
Confidence 9999999994
No 8
>PLN03169 chalcone synthase family protein; Provisional
Probab=100.00 E-value=1.5e-52 Score=421.17 Aligned_cols=351 Identities=19% Similarity=0.261 Sum_probs=259.8
Q ss_pred CCCceEEEEeeeecCCCCCccCHHHHHHHHHHc-CCCChHHHHHHHHHHHHcCCCCceecCCCC----CCC-------CC
Q 014606 7 PSKRVYLVDFICYKAPESLRAPISAFIEHTERS-GTFDSKAVEFQTKVLERSGVGNETCLPCGT----HLL-------PA 74 (421)
Q Consensus 7 ~~~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~-~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~----~~~-------~~ 74 (421)
++.+++|.|+|+++|++ +++|+|+.+.+... +..++...+.+++|++++||++||++.++. .+. ..
T Consensus 18 ~~~~~~I~gigt~~P~~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~~~~~~~ 95 (391)
T PLN03169 18 NPGKATILALGKAFPSQ--LVPQEYLVDGYFRDTKCDDPALKEKLERLCKTTTVKTRYVVMSKEILDKYPELATEGTPTI 95 (391)
T ss_pred CCCCeEEEEEEeeCCCe--ecCHHHHHHHHHHHhcccCHHHHHHHHHHHHhCCcceeeEeccccchhhCccccccCCCCH
Confidence 45679999999999999 99999999865442 111222234578899999999999974211 100 01
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCCc-eeeeeeCCcchHHHHH
Q 014606 75 DGSLNSSMEELKTVLFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSNV-RSFHLSGMGCSAGILS 153 (421)
Q Consensus 75 ~~s~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~~-~~~~i~~~~C~g~~~a 153 (421)
+..+..+.+.+.+|+++|+++||+++|++++|||+||++|++++..|+.+..|+++||+++.+ .++|++ +||+|+++|
T Consensus 96 ~~r~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~lI~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~d~~-~gC~g~~~a 174 (391)
T PLN03169 96 KQRLDIANEAVTQMAVEASLACIKEWGRPVSDITHLVYVSSSEARLPGGDLYLAKQLGLSPDVQRVMLYF-LGCSGGVAG 174 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECcCCCCCCcHHHHHHHHhCcCCcceeeeccc-ChhHHHHHH
Confidence 112344788899999999999999999999999999999878999999999999999998666 479999 699999999
Q ss_pred HHHHHHHHHccCCCeEEEEEeccccCCCccC-CC-ccchhhhcccccCcEEEEEecCCccc-cccceeeeeeeeeeecCC
Q 014606 154 ISLAKDLLRVQKNSLALVLSMESVSSNGYQG-KV-KYMQLANCLFRMGGAGILLSNKKEDR-QRAKYELQHLVRTHLGSK 230 (421)
Q Consensus 154 l~~A~~li~~g~~~~vLvv~~e~~s~~~~~~-~d-~~~~~~~~lfGDGAaA~lL~~~~~~~-~~~~~~~~~~~~~~~~t~ 230 (421)
|.+|.+++++++.++||||++|.++..++.. .+ ..+..+..+|||||+|+||++.+... ..+.+++.......++ +
T Consensus 175 L~~A~~~~~~~~~~~vLvv~~e~~s~~~~~~~~~~~~d~~~~~lFGDGAaA~vl~~~~~~~~~~~~~~l~~~~~~~ip-~ 253 (391)
T PLN03169 175 LRVAKDIAENNPGSRVLLTTSETTILGFRPPSPDRPYDLVGAALFGDGAAAVIIGADPIPVSESPFFELHTAIQQFLP-G 253 (391)
T ss_pred HHHHHHHHHhCCCCeEEEEEEEcChhhccCCCccchhhhhhhhhccCceEEEEEecCCCcccCCcceEEEeeeeeEcC-C
Confidence 9999999999999999999999988765321 11 22344788999999999999865421 1112332211111111 1
Q ss_pred CccceeeeeeccCCCcceeeeChhhhHHHHHHHHHHHHHhhhhccchhHHHHHHHHhhhhhcCCCCCCCCCCCCCccccc
Q 014606 231 DTAYKCVFQEHDDEGFTGVSLSRSILQVAGEALKANMATLAAMVLPYSELVWYAVSVTWKKIWPPGRKRGPYIPDFRKAF 310 (421)
Q Consensus 231 ~~~~~~~~~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~gl~~~~~~~~~~~di 310 (421)
+. +.+.+.....| +.+.+.+++|......+ ...+.+.|.++|++. +|+
T Consensus 254 ~~--~~~~~~~~~~g-~~~~~g~~v~~~~~~~~---------------------~~~i~~~L~~~gl~~--------~di 301 (391)
T PLN03169 254 TE--KTIDGRLTEEG-INFKLGRELPQKIEDNI---------------------EGFCKKLMKKAGLVE--------KDY 301 (391)
T ss_pred Cc--cccCceecCCc-eEEEECcHHHHHHHHHH---------------------HHHHHHHHHHcCCCC--------CCC
Confidence 10 00001111111 12233344443222111 112234566789873 778
Q ss_pred c--EEEecCCCHHHHHHHHHHCCCChhhhHHHHHHHhccCCCccchHHHHHHHHHHcCCCC---CCCeEEEEeecccccc
Q 014606 311 E--HFCVHAGGKAVIDAIKENLKLKDRDVEASKTTLYRFGNTSSSSVWYELSYLEAKGKVK---KGDKIWQLAFGSGFKC 385 (421)
Q Consensus 311 d--~~i~Hq~~~~~~~~i~~~lgl~~~~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~g~~~---~Gd~vll~~~G~G~~~ 385 (421)
| +|++||+|++|++.++++||++++|+..|+.++++||||+|||+|++|++++++++++ +||++++++||+|++|
T Consensus 302 d~~~~v~Hq~n~~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtsSasip~~L~~~~~~~~~~~~~~gd~~ll~afG~G~s~ 381 (391)
T PLN03169 302 NDLFWAVHPGGPAILNRLEKKLKLAPEKLECSRRALMDYGNVSSNTIVYVLEYMREELKKKGEEDEEWGLILAFGPGITF 381 (391)
T ss_pred CcceEEecCCCHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchHhHHHHHHHHHHHhhcccCCCCCcEEEEEEEcccHhH
Confidence 8 9999999999999999999999999988889999999999999999999999888765 6999999999999999
Q ss_pred cceeeeee
Q 014606 386 NSAVWKCI 393 (421)
Q Consensus 386 ~~~llr~~ 393 (421)
++++|||.
T Consensus 382 ~~~ll~~~ 389 (391)
T PLN03169 382 EGILARNL 389 (391)
T ss_pred HHHHHhhh
Confidence 99999984
No 9
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=5.9e-53 Score=419.21 Aligned_cols=338 Identities=17% Similarity=0.167 Sum_probs=261.1
Q ss_pred CCCceEEEEeeeecCCCCCccCHHHHHHHHHHcCCCChHHHHHHHHHHHHcCCCCceecCCCCCCCCCCCChHHHHHHHH
Q 014606 7 PSKRVYLVDFICYKAPESLRAPISAFIEHTERSGTFDSKAVEFQTKVLERSGVGNETCLPCGTHLLPADGSLNSSMEELK 86 (421)
Q Consensus 7 ~~~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~s~~~~~~~~~ 86 (421)
+.++++|.++|+|+|++ +++|+++.+.... .+. ...+++.+++||++||++.++ + ++.
T Consensus 4 ~~~~~~I~~~g~~lP~~--~v~~~~~~~~~~~---~~~---~~~~~i~~~~Gi~~R~~~~~~-------e-------~~~ 61 (353)
T PRK12880 4 RFDKAKISGICVSVPEH--KICIDDELESVFS---NDI---KTLKRMKKVIGLNTRYICDEN-------T-------CVS 61 (353)
T ss_pred cccccEEEEEEEECCCe--EecHHHHHHHhcC---cch---hhhhhhhhccCceEEEeCCCC-------C-------CHH
Confidence 36779999999999999 9999976543321 111 113578888999999997643 1 245
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEec-cCCCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHHccC
Q 014606 87 TVLFSIVQDLFSKHKINPKSIDILITNC-SVSCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLRVQK 165 (421)
Q Consensus 87 ~la~~Aa~~aL~~ag~~~~~Id~li~~s-s~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~~g~ 165 (421)
+|+++|+++||+++|++++|||+||++| ++++..|+++.+|+++||+++++.+||++ .||+|+++||++|.+++++|+
T Consensus 62 ~la~~Aa~~aL~~a~~~~~dId~lI~~t~t~d~~~P~~a~~v~~~Lg~~~~~~~~di~-~~C~g~~~aL~~A~~~i~~~~ 140 (353)
T PRK12880 62 DLGKHAANTLLQGLNIDKNSLDALIVVTQSPDFFMPSTACYLHQLLNLSSKTIAFDLG-QACAGYLYGLFVAHSLIQSGL 140 (353)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCCceEEehh-hhhHHHHHHHHHHHHHHHcCC
Confidence 8999999999999999999999999987 77999999999999999998789999998 599999999999999999999
Q ss_pred CCeEEEEEeccccCCCccCCCccchhhhcccccCcEEEEEecCCccccccceeeeeeeeeeecCCCccceeeeeeccCCC
Q 014606 166 NSLALVLSMESVSSNGYQGKVKYMQLANCLFRMGGAGILLSNKKEDRQRAKYELQHLVRTHLGSKDTAYKCVFQEHDDEG 245 (421)
Q Consensus 166 ~~~vLvv~~e~~s~~~~~~~d~~~~~~~~lfGDGAaA~lL~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~g 245 (421)
.+ ||||++|.+|+.+ ++.|+. ...+|||||+|+||++++... ++ ..+.+++..++.+..+.++..
T Consensus 141 ~~-~LVv~~e~~S~~~-~~~d~~---~~~lFGDGAaA~vl~~~~~~~--------~~--~~~~~~~~~~~~~~~p~g~~~ 205 (353)
T PRK12880 141 GK-ILLICGDTLSKFI-HPKNMN---LAPIFGDGVSATLIEKTDFNE--------AF--FELGSDGKYFDKLIIPKGAMR 205 (353)
T ss_pred CC-EEEEEehhhhccC-CcccCC---ceeeecccceEEEEEecCCCC--------ce--EEEEecCCCCCeEEecCCCcC
Confidence 88 9999999999887 445554 578999999999999765431 11 234566677776666543221
Q ss_pred cceeeeChhhhHHHHHHHHHHHHHhhhhccchhHHHHHHHHhhh----hhcCCCCCCCCCCCCCccccccEEEecCCCHH
Q 014606 246 FTGVSLSRSILQVAGEALKANMATLAAMVLPYSELVWYAVSVTW----KKIWPPGRKRGPYIPDFRKAFEHFCVHAGGKA 321 (421)
Q Consensus 246 ~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~----~~l~~~gl~~~~~~~~~~~did~~i~Hq~~~~ 321 (421)
..++....+...+.... ......+.|+++++|+++++.++ +.|.++|++ .+|||+|++||+|++
T Consensus 206 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~g~~v~~~~~~~~~~~i~~~L~~~gl~--------~~did~~v~HQ~~~~ 273 (353)
T PRK12880 206 IPKADIFNDDSLMQTEE----FRQLENLYMDGANIFNMALECEPKSFKEILEFSKVD--------EKDIAFHLFHQSNAY 273 (353)
T ss_pred CCccccccccccccccc----cccCceEEEcCHHHHHHHHHHHHHHHHHHHHHcCCC--------HHHCCEEEECCCCHH
Confidence 11111100000000000 00011123556777887777665 445689998 499999999999999
Q ss_pred HHHHHHHHCCCChhhhHHHHHHHhccCCCccchHHHHHHHHHHcCCCCCCCeEEEEeecccccccceeeeeeccCCCCC
Q 014606 322 VIDAIKENLKLKDRDVEASKTTLYRFGNTSSSSVWYELSYLEAKGKVKKGDKIWQLAFGSGFKCNSAVWKCISNLRPEK 400 (421)
Q Consensus 322 ~~~~i~~~lgl~~~~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~g~~~~Gd~vll~~~G~G~~~~~~llr~~~~~~~~~ 400 (421)
+++.++++||++++|+. ..++++|||++|||+|++|++++++++++ +++++||+|++|+++++||.+...||.
T Consensus 274 i~~~i~~~Lgl~~ek~~--~~~l~~~GNtssasip~~L~~~~~~~~~~----~ll~~~G~G~s~g~~ll~~~~~~~~~~ 346 (353)
T PRK12880 274 LVDCIKEELKLNDDKVP--NFIMEKYANLSACSLPALLCELDTPKEFK----ASLSAFGAGLSWGSAVLNFKDLYTKDI 346 (353)
T ss_pred HHHHHHHHhCCCHHHhh--hhhHHhhCCHHHHHHHHHHHHHHHcCCcE----EEEEEEchhhhheEeEEEECCcCCCce
Confidence 99999999999999984 34689999999999999999999877764 999999999999999999988777763
No 10
>PLN03168 chalcone synthase; Provisional
Probab=100.00 E-value=9e-52 Score=414.72 Aligned_cols=349 Identities=17% Similarity=0.209 Sum_probs=262.6
Q ss_pred CceEEEEeeeecCCCCCccCHHHHHHHHHHcCC--CChHHHHHHHHHHHHcCCCCceecCCC-CC---CCC-------CC
Q 014606 9 KRVYLVDFICYKAPESLRAPISAFIEHTERSGT--FDSKAVEFQTKVLERSGVGNETCLPCG-TH---LLP-------AD 75 (421)
Q Consensus 9 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~--~~~~~~~~~~~i~~~~GI~~R~~~~~~-~~---~~~-------~~ 75 (421)
.+.+|.++|+.+|++ .++|+|+.+...+... ..+...+++++|++++||++||++-++ .. ... .+
T Consensus 14 ~~~~i~~i~ta~P~~--~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~ps~~ 91 (389)
T PLN03168 14 GPACVLGIGTAVPPA--EFLQSEYPDFFFNITNCGEKEALKAKFKRICDKSGIRKRHMFLTEEVLKANPGICTYMEPSLN 91 (389)
T ss_pred CCeEEEEEeccCCCc--ccCHHHHHHHHHHhccccCcHHHHHHHHHHHHhcCCCeeeeeccccchhhCcccccccCCCHH
Confidence 568899999999999 9999999998876431 122234457889999999999985422 11 110 02
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCCc-eeeeeeCCcchHHHHHH
Q 014606 76 GSLNSSMEELKTVLFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSNV-RSFHLSGMGCSAGILSI 154 (421)
Q Consensus 76 ~s~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~~-~~~~i~~~~C~g~~~al 154 (421)
..+..|.+.+.+|+++|+++||+++|++++|||+||++|++++..|+++.+|+++||+++.+ .++|++ +||+|+++||
T Consensus 92 ~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r~~d~~-~gC~g~~~aL 170 (389)
T PLN03168 92 VRHDIVVVQVPKLAAEAAQKAIKEWGGRKSDITHIVFATTSGVNMPGADHALAKLLGLKPTVKRVMMYQ-TGCFGGASVL 170 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCccHHHHHHHHhCcCCcceeeeeeC-CccHHHHHHH
Confidence 23566889999999999999999999999999999999855577999999999999998654 479999 6999999999
Q ss_pred HHHHHHHHccCCCeEEEEEeccccCCCccCC--CccchhhhcccccCcEEEEEecCCccc-cccceeeeeeeeeeec-CC
Q 014606 155 SLAKDLLRVQKNSLALVLSMESVSSNGYQGK--VKYMQLANCLFRMGGAGILLSNKKEDR-QRAKYELQHLVRTHLG-SK 230 (421)
Q Consensus 155 ~~A~~li~~g~~~~vLvv~~e~~s~~~~~~~--d~~~~~~~~lfGDGAaA~lL~~~~~~~-~~~~~~~~~~~~~~~~-t~ 230 (421)
++|++++++++.++||||++|.+|..++... +.+++++..+|||||+|+||++++... +.+.+++.......++ ++
T Consensus 171 ~~A~~~i~~~~~~~VLVV~~E~~S~~~~~~~~~~~~~~~~~~LFGDGAaAvvl~~~~~~~~~~~~~~~~~~~~~~~p~s~ 250 (389)
T PLN03168 171 RVAKDLAENNKGARVLAVASEVTAVTYRAPSENHLDGLVGSALFGDGAGVYVVGSDPKPEVEKALFEVHWAGETILPESD 250 (389)
T ss_pred HHHHHHHHhCCCCEEEEEEEehhhhhccCcccccHHHHhccccccCccEEEEEecCCCCccCCcceEEEeeeeEEEcCCC
Confidence 9999999999999999999999998763321 133456789999999999999865421 1122443322122222 22
Q ss_pred CccceeeeeeccCCCcceeeeChhhhHHHHHHHHHHHHHhhhhccchhHHHHHHHHhhhhhcCCCCCCCCCCCCCccccc
Q 014606 231 DTAYKCVFQEHDDEGFTGVSLSRSILQVAGEALKANMATLAAMVLPYSELVWYAVSVTWKKIWPPGRKRGPYIPDFRKAF 310 (421)
Q Consensus 231 ~~~~~~~~~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~gl~~~~~~~~~~~di 310 (421)
+. +.+..++.| ..+.+.+++|..+.+.+... +.+.+.+.|+.. .|+
T Consensus 251 ~~----~~~~~~~~g-~~~~l~~~vp~~i~~~~~~~---------------------l~~~l~~~~~~~--------~d~ 296 (389)
T PLN03168 251 GA----IDGHLTEAG-LIFHLMKDVPGLISKNIEKF---------------------LNEARKCVGSPD--------WNE 296 (389)
T ss_pred Cc----cCceEecCc-eEEEECHHHHHHHHHHHHHH---------------------HHHHHHhcCCCc--------ccc
Confidence 21 111111122 23445566665544333222 223344556542 577
Q ss_pred cEEEecCCCHHHHHHHHHHCCCChhhhHHHHHHHhccCCCccchHHHHHHHHHHcCCCCCC--------CeEEEEeeccc
Q 014606 311 EHFCVHAGGKAVIDAIKENLKLKDRDVEASKTTLYRFGNTSSSSVWYELSYLEAKGKVKKG--------DKIWQLAFGSG 382 (421)
Q Consensus 311 d~~i~Hq~~~~~~~~i~~~lgl~~~~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~g~~~~G--------d~vll~~~G~G 382 (421)
++|++||+|++|++.+.++||++++|+..|+.++++||||+|||+|+.|++++++ ++++| |++++++||+|
T Consensus 297 ~~~v~Hqgg~~Il~~v~~~Lgl~~ek~~~s~~vl~~yGNtSSaSv~~vL~~~~~~-~~~~g~~~~~~g~~~~ll~afGpG 375 (389)
T PLN03168 297 MFWAVHPGGPAILDQVEAKLKLTKDKMQGSRDILSEFGNMSSASVLFVLDQIRQR-SVKMGASTLGEGSEFGFFIGFGPG 375 (389)
T ss_pred ceEEecCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCccHhhhHHHHHHHHHHH-HhhcCCCCCCCCccEEEEEEEcch
Confidence 8999999999999999999999999999888899999999999999999998864 44443 89999999999
Q ss_pred ccccceeeeeecc
Q 014606 383 FKCNSAVWKCISN 395 (421)
Q Consensus 383 ~~~~~~llr~~~~ 395 (421)
++|++++|||..+
T Consensus 376 ~t~~~~llr~~~~ 388 (389)
T PLN03168 376 LTLEVLVLRAAAN 388 (389)
T ss_pred hhhhhhhheeccc
Confidence 9999999999653
No 11
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=100.00 E-value=1.4e-51 Score=412.01 Aligned_cols=345 Identities=35% Similarity=0.534 Sum_probs=265.6
Q ss_pred ceEEEEeeeecCCCCCccCHHHHHHHHHHcCCC--ChHHHHHHHHHHHHcCCCCceecCC--CC-CC------CCCCCCh
Q 014606 10 RVYLVDFICYKAPESLRAPISAFIEHTERSGTF--DSKAVEFQTKVLERSGVGNETCLPC--GT-HL------LPADGSL 78 (421)
Q Consensus 10 ~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~--~~~~~~~~~~i~~~~GI~~R~~~~~--~~-~~------~~~~~s~ 78 (421)
.++|.++|+|+|++ +++|+++.+.+...... .+...+++++|++++||++||++.+ +. .. ...+.++
T Consensus 1 ~~~I~~~~~~~P~~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gI~~R~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (361)
T cd00831 1 AATILAIGTAVPPH--RVPQSELVDFYRRLFSSDHLPELKEKLKRLCAKTGIETRYLVLPGGEETYAPRPEMSPSLDERN 78 (361)
T ss_pred CcEEEEEEEeCCCC--cCCHHHhhHHHHhcCChhhhHHHHHHHHHHHhhcceeEEEEEecCchhhcCCccccCCCcCcch
Confidence 36899999999999 99999999988643111 1233455689999999999999764 21 11 1234456
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHH
Q 014606 79 NSSMEELKTVLFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAK 158 (421)
Q Consensus 79 ~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~ 158 (421)
..+.+++.+|+++|+++||+++|+++++||+||++|++++..|+++.+|+++||+++++.+||++++||+|++.||++|.
T Consensus 79 ~~~~~~~~~la~~Aa~~aL~~a~~~~~~Id~li~~s~~~~~~P~~a~~i~~~lgl~~~~~~~dv~~~~C~~~~~al~~A~ 158 (361)
T cd00831 79 DIALEEARELAEEAARGALDEAGLRPSDIDHLVVNTSTGNPTPSLDAMLINRLGLRPDVKRYNLGGMGCSAGAIALDLAK 158 (361)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECCCCCCCCCHHHHHHHHhCCCcccchhccccccchhHHHHHHHHH
Confidence 67889999999999999999999999999999999877789999999999999998779999999559999999999999
Q ss_pred HHHHccCCCeEEEEEeccccCCCccCCC-ccchhhhcccccCcEEEEEecCCcccc--ccceeeeeeeeeeecCCCccce
Q 014606 159 DLLRVQKNSLALVLSMESVSSNGYQGKV-KYMQLANCLFRMGGAGILLSNKKEDRQ--RAKYELQHLVRTHLGSKDTAYK 235 (421)
Q Consensus 159 ~li~~g~~~~vLvv~~e~~s~~~~~~~d-~~~~~~~~lfGDGAaA~lL~~~~~~~~--~~~~~~~~~~~~~~~t~~~~~~ 235 (421)
+++++++.++||||++|.+|..+ ++.| +...+...+|||||+|+||++.+.... ...+++.+.....++..+ +
T Consensus 159 ~~~~~~~~~~aLvv~~e~~s~~~-~~~d~~~~~~~~~lfGDgaaA~ll~~~~~~~~~~~~~~~~~~~~~~~~p~~~---~ 234 (361)
T cd00831 159 DLLEANPGARVLVVSTELCSLWY-RGPDHRSMLVGNALFGDGAAAVLLSNDPRDRRRERPLFELVRAASTLLPDSE---D 234 (361)
T ss_pred HHHHHCCCCEEEEEEeeccccee-CCCCcHHHhhhhhhccCCceEEEEEcCCCcccccccceeeecccceeeecCC---C
Confidence 99999999999999999998865 4445 555556789999999999998765320 112333332211111111 1
Q ss_pred eeeeeccCCCcceeeeChhhhHHHHHHHHHHHHHhhhhccchhHHHHHHHHhhhhhcCCC--CCCCCCCCCCccccccEE
Q 014606 236 CVFQEHDDEGFTGVSLSRSILQVAGEALKANMATLAAMVLPYSELVWYAVSVTWKKIWPP--GRKRGPYIPDFRKAFEHF 313 (421)
Q Consensus 236 ~~~~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~--gl~~~~~~~~~~~did~~ 313 (421)
.+.+.....+ ..+.+.++++.... +...+.+.+.|.++ |++ .+|||+|
T Consensus 235 ~~~~~~~~~~-~~~~~~~~v~~~~~---------------------~~~~~~i~~~L~~~~~g~~--------~~did~~ 284 (361)
T cd00831 235 AMGWHLGEEG-LTFVLSRDVPRLVE---------------------KNLERVLRKLLARLGIGLF--------KLAFDHW 284 (361)
T ss_pred ceEEEEEcce-EEEEeChhHHHHHH---------------------HHHHHHHHHHhccccCCCc--------cccceEE
Confidence 1111111111 12222222222111 11223344567788 988 4899999
Q ss_pred EecCCCHHHHHHHHHHCCCChhhhHHHHHHHhccCCCccchHHHHHHHHHHcCCCCCCCeEEEEeecccccccceee
Q 014606 314 CVHAGGKAVIDAIKENLKLKDRDVEASKTTLYRFGNTSSSSVWYELSYLEAKGKVKKGDKIWQLAFGSGFKCNSAVW 390 (421)
Q Consensus 314 i~Hq~~~~~~~~i~~~lgl~~~~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~g~~~~Gd~vll~~~G~G~~~~~~ll 390 (421)
++||+|+++++.++++||++++|+.+|+.++++||||+|||+|++|++++++|++++||+|++++||+|++|+++++
T Consensus 285 ~~H~~~~~i~~~v~~~lgl~~~~~~~s~~~l~~~GN~~sasi~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~l~ 361 (361)
T cd00831 285 CVHPGGRAVLDAVEKALGLSPEDLEASRMVLRRYGNMSSSSVLYVLAYMEAKGRVKRGDRGLLIAFGPGFTCESAVW 361 (361)
T ss_pred EECCCChHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhccHHHHHHHHHHhCCCCCCCEEEEEEEcCCceeeeeeC
Confidence 99999999999999999999999988889999999999999999999999999999999999999999999999885
No 12
>PLN03170 chalcone synthase; Provisional
Probab=100.00 E-value=3.1e-51 Score=412.01 Aligned_cols=350 Identities=17% Similarity=0.221 Sum_probs=267.1
Q ss_pred CceEEEEeeeecCCCCCccCHHHHHHHHHHcCCC-C-hHHHHHHHHHHHHcCCCCceecCCCC-C---CC-------CCC
Q 014606 9 KRVYLVDFICYKAPESLRAPISAFIEHTERSGTF-D-SKAVEFQTKVLERSGVGNETCLPCGT-H---LL-------PAD 75 (421)
Q Consensus 9 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~-~-~~~~~~~~~i~~~~GI~~R~~~~~~~-~---~~-------~~~ 75 (421)
.+.+|.++|+.+|++ .++++|+.+...+.... + ++..+++.+|++++||++||++.++. . .. ..+
T Consensus 19 ~~~~i~~i~ta~P~~--~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~ 96 (401)
T PLN03170 19 GPATVLAIGTATPAN--CVHQADYPDYYFRITKSEHMTELKEKFKRMCDKSQIRKRYMHLTEEYLAENPNMCAYMAPSLD 96 (401)
T ss_pred CCeEEEEEeecCCCc--cccHHHHHHHHHHHccccCchhHHHHHHHHHHhCCCCceeEeccccchhhCccccccCCCCHH
Confidence 458899999999999 99999999988764311 1 22334578999999999999854221 1 11 112
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCCc-eeeeeeCCcchHHHHHH
Q 014606 76 GSLNSSMEELKTVLFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSNV-RSFHLSGMGCSAGILSI 154 (421)
Q Consensus 76 ~s~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~~-~~~~i~~~~C~g~~~al 154 (421)
..+..+.+.+.+|+++|+++||+++|++++|||+||++|++++..|+++.+|+++||+++.+ .++|++ +||+|++.||
T Consensus 97 ~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r~~d~~-~gC~G~~~aL 175 (401)
T PLN03170 97 ARQDIVVVEVPKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVNRLMMYQ-QGCFAGGTVL 175 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCCCChHHHHHHHHhCcCcccHHHHhhc-ChhHHHHHHH
Confidence 23667889999999999999999999999999999998866666999999999999998654 479999 6999999999
Q ss_pred HHHHHHHHccCCCeEEEEEeccccCCCccCCC--ccchhhhcccccCcEEEEEecCCccc-cccceeeeeeeeeeecCCC
Q 014606 155 SLAKDLLRVQKNSLALVLSMESVSSNGYQGKV--KYMQLANCLFRMGGAGILLSNKKEDR-QRAKYELQHLVRTHLGSKD 231 (421)
Q Consensus 155 ~~A~~li~~g~~~~vLvv~~e~~s~~~~~~~d--~~~~~~~~lfGDGAaA~lL~~~~~~~-~~~~~~~~~~~~~~~~t~~ 231 (421)
++|.+++++++.++||||++|.+|..++.+.+ .++.+...+|||||+|+||++++... ..+.+++.+.....++ ++
T Consensus 176 ~~A~~l~~~~~~~~vLVV~~E~~S~~~~~~~~~~~~~~~~~~LFGDGAaAvVl~~~~~~~~~~~~~~l~~~~~~~~p-~~ 254 (401)
T PLN03170 176 RVAKDLAENNRGARVLVVCSEITAVTFRGPSESHLDSMVGQALFGDGAAAVIVGADPDERVERPLFQLVSASQTILP-DS 254 (401)
T ss_pred HHHHHHHHcCCCCeEEEEEEehhhhccCCcccchhhhhhhhhhhhceeEEEEEecCCcccccCCceEEeeccceEec-CC
Confidence 99999999999999999999999987633322 23455788999999999999865421 1122444332111111 11
Q ss_pred ccceeeeeeccCCCcceeeeChhhhHHHHHHHHHHHHHhhhhccchhHHHHHHHHhhhhhcCCCCCCCCCCCCCcccccc
Q 014606 232 TAYKCVFQEHDDEGFTGVSLSRSILQVAGEALKANMATLAAMVLPYSELVWYAVSVTWKKIWPPGRKRGPYIPDFRKAFE 311 (421)
Q Consensus 232 ~~~~~~~~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~gl~~~~~~~~~~~did 311 (421)
... +.+.....| ..+.+.+++|....+.+. ..+.+.|.++|++ .+||+
T Consensus 255 ~~~--~~~~i~~~G-~~~~l~~~vp~~~~~~i~---------------------~~v~~~L~~~gl~--------~~di~ 302 (401)
T PLN03170 255 EGA--IDGHLREVG-LTFHLLKDVPGLISKNIE---------------------RSLEEAFKPLGIT--------DYNSI 302 (401)
T ss_pred ccc--ccceEEcCC-eEEEEehHHHHHHHHHHH---------------------HHHHHHHHhcCCC--------ccccC
Confidence 111 111111122 234455666655433222 2233556678887 38899
Q ss_pred EEEecCCCHHHHHHHHHHCCCChhhhHHHHHHHhccCCCccchHHHHHHHHH----HcCCCCCC---CeEEEEeeccccc
Q 014606 312 HFCVHAGGKAVIDAIKENLKLKDRDVEASKTTLYRFGNTSSSSVWYELSYLE----AKGKVKKG---DKIWQLAFGSGFK 384 (421)
Q Consensus 312 ~~i~Hq~~~~~~~~i~~~lgl~~~~~~~s~~~l~~~Gn~~sasi~i~L~~~~----~~g~~~~G---d~vll~~~G~G~~ 384 (421)
+|++||+|+++++.+.+.||++++++.+|+.++++||||+|+|+|+.|++++ ++|++++| |++++++||+|++
T Consensus 303 ~~v~Hqgg~~il~~v~~~Lgl~~~~~~~s~~~l~~~GNtsSasv~~vL~~~~~~~~~~g~~~~G~~~~~~ll~afGpG~t 382 (401)
T PLN03170 303 FWVAHPGGPAILDQVEAKVGLEKERMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQATTGEGFDWGVLFGFGPGLT 382 (401)
T ss_pred eEEecCCcHHHHHHHHHHcCCChHHHHHHHHHHHHhCccHHhHHHHHHHHHHHhHhhcCCCCCCCCccEEEEEEeCchHh
Confidence 9999999999999999999999999988899999999999999999999997 46888888 8999999999999
Q ss_pred ccceeeeeec
Q 014606 385 CNSAVWKCIS 394 (421)
Q Consensus 385 ~~~~llr~~~ 394 (421)
|++++|||..
T Consensus 383 ~~~~ll~~~~ 392 (401)
T PLN03170 383 VETVVLHSVP 392 (401)
T ss_pred HHhHHheecc
Confidence 9999999943
No 13
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=100.00 E-value=1.3e-51 Score=406.87 Aligned_cols=320 Identities=15% Similarity=0.220 Sum_probs=253.0
Q ss_pred CceEEEEeeeecCCCCCccCHHHHHHHHHHcCCCChHHHHHHHHHHHHcCCCCceecCCCCCCCCCCCChHHHHHHHHHH
Q 014606 9 KRVYLVDFICYKAPESLRAPISAFIEHTERSGTFDSKAVEFQTKVLERSGVGNETCLPCGTHLLPADGSLNSSMEELKTV 88 (421)
Q Consensus 9 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~s~~~~~~~~~~l 88 (421)
.+++|.++|+|+|++ +++|+|+.+.++ .++ +++.+++||++||++.++ + ++.+|
T Consensus 2 ~~~~I~~~g~~lP~~--~v~~~~~~~~~~----~~~------~~i~~~~Gi~~r~~~~~~-------e-------~~~~l 55 (326)
T PRK05963 2 CSSRIAGFGHAVPDR--RVENAEIEAQLG----LET------GWIERRTGIRCRRWAAPD-------E-------TLSDL 55 (326)
T ss_pred CccEEEEEEEECCCC--eecHHHHHHHcC----CCH------HHhhhccCCeEEEEcCCC-------C-------CHHHH
Confidence 468999999999999 999999998764 233 467889999999997653 2 24589
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEec-cCCCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHHccCCC
Q 014606 89 LFSIVQDLFSKHKINPKSIDILITNC-SVSCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLRVQKNS 167 (421)
Q Consensus 89 a~~Aa~~aL~~ag~~~~~Id~li~~s-s~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~~g~~~ 167 (421)
+++||++||+++|+++++||+||++| ++++..|+.+.+|+++||++ ++.+||+++ +|+|+++||++|.++++++ .+
T Consensus 56 a~~Aa~~aL~~ag~~~~~Id~li~~t~~~d~~~p~~a~~v~~~Lg~~-~~~~~di~~-~C~g~~~aL~~A~~~l~~~-~~ 132 (326)
T PRK05963 56 AASAGDMALSDAGIERSDIALTLLATSTPDHLLPPSAPLLAHRLGLQ-NSGAIDLAG-ACAGFLYALVLADGFVRAQ-GK 132 (326)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCcHHHHHHHHhCCC-CCceeeccc-hhhHHHHHHHHHHHHHHcC-CC
Confidence 99999999999999999999999987 67889999999999999998 689999995 9999999999999999987 49
Q ss_pred eEEEEEeccccCCCccCCCccchhhhcccccCcEEEEEecCCccccccceeeeeeeeeeecCCCccceeeeeeccCCCcc
Q 014606 168 LALVLSMESVSSNGYQGKVKYMQLANCLFRMGGAGILLSNKKEDRQRAKYELQHLVRTHLGSKDTAYKCVFQEHDDEGFT 247 (421)
Q Consensus 168 ~vLvv~~e~~s~~~~~~~d~~~~~~~~lfGDGAaA~lL~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~g~~ 247 (421)
+||||++|.++..+ ++.++. ...+|||||+|+||++++... . +++...+.+++..++.+..+.++..
T Consensus 133 ~aLVv~~d~~s~~~-~~~~~~---~~~lfGDgA~A~ll~~~~~~~----~---~~l~~~~~t~~~~~~~~~~~~gg~~-- 199 (326)
T PRK05963 133 PVLVVAANILSRRI-NMAERA---SAVLFADAAGAVVLAPSAKAN----S---GVLGSQLISDGSHYDLIKIPAGGSA-- 199 (326)
T ss_pred eEEEEEechhhccC-CccccC---ceEEEeecceEEEEEecCCCC----C---ceEEEEEEEcCCCCCeEEeCCCCcC--
Confidence 99999999988765 334444 578999999999999876431 1 2333455666666665554433111
Q ss_pred eeeeChhhhHHHHHHHHHHHHHhhhhccchhHHHHHHHH----hhhhhcCCCCCCCCCCCCCccccccEEEecCCCHHHH
Q 014606 248 GVSLSRSILQVAGEALKANMATLAAMVLPYSELVWYAVS----VTWKKIWPPGRKRGPYIPDFRKAFEHFCVHAGGKAVI 323 (421)
Q Consensus 248 ~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~i~~~l~~~gl~~~~~~~~~~~did~~i~Hq~~~~~~ 323 (421)
.+.+.+.. ... .++. ..+++++|++++. .+.+.|.++|++ ++|||+|++||+|.+++
T Consensus 200 -~~~~~~~~---~~~--~~~~-----~~~~~~~~~~~~~~~~~~~~~~L~~~gl~--------~~did~~~~h~~~~~~~ 260 (326)
T PRK05963 200 -RPFAPERD---ASE--FLMT-----MQDGRAVFTEAVRMMSGASQNVLASAAMT--------PQDIDRFFPHQANARIV 260 (326)
T ss_pred -CCCccccc---ccc--cceE-----ecCCHHHHHHHHHHHHHHHHHHHHHcCCC--------HHHCCEEEeCCCCHHHH
Confidence 00000000 000 0000 0012333444443 344567789998 49999999999999999
Q ss_pred HHHHHHCCCChhhhHHHHHHHhccCCCccchHHHHHHHHHHcCCCCCCCeEEEEeecccccccceeeee
Q 014606 324 DAIKENLKLKDRDVEASKTTLYRFGNTSSSSVWYELSYLEAKGKVKKGDKIWQLAFGSGFKCNSAVWKC 392 (421)
Q Consensus 324 ~~i~~~lgl~~~~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~g~~~~Gd~vll~~~G~G~~~~~~llr~ 392 (421)
+.++++||++++|+ ..++++||||++||+|++|+++++++++++||+|++++||+|++|+++++||
T Consensus 261 ~~~~~~l~l~~~k~---~~~l~~~Gn~~sas~~~~L~~~~~~~~~~~Gd~vll~~~G~G~~~~~~ll~~ 326 (326)
T PRK05963 261 DKVCETIGIPRAKA---ASTLETYGNSSAATIPLSLSLANLEQPLREGERLLFAAAGAGMTGGAVVMRV 326 (326)
T ss_pred HHHHHHcCCCHHHh---hhhHHhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEEEEEehhhhheeeEEeC
Confidence 99999999999999 4799999999999999999999999999999999999999999999999997
No 14
>PLN03173 chalcone synthase; Provisional
Probab=100.00 E-value=4.7e-51 Score=409.12 Aligned_cols=348 Identities=19% Similarity=0.219 Sum_probs=264.3
Q ss_pred CceEEEEeeeecCCCCCccCHHHHHHHHHHcCC--CChHHHHHHHHHHHHcCCCCceecCC-CC---CCCC-------CC
Q 014606 9 KRVYLVDFICYKAPESLRAPISAFIEHTERSGT--FDSKAVEFQTKVLERSGVGNETCLPC-GT---HLLP-------AD 75 (421)
Q Consensus 9 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~--~~~~~~~~~~~i~~~~GI~~R~~~~~-~~---~~~~-------~~ 75 (421)
..++|.++|+.+|++ .++++|+.+.+..... ..+...+++++|++++||++||++-+ +. +... .+
T Consensus 15 ~~~~i~~i~ta~P~~--~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~ 92 (391)
T PLN03173 15 GPATIMAIGTSTPPN--CVDQSTYPDYYFRITNSEHKVELKEKFKRMCEKSMIKKRYMHLTEEILKENPSVCEYMAPSLD 92 (391)
T ss_pred CCeEEEEEEccCCCc--ccCHHHHHHHHHHHhccccchhHHHHHHHHHHhCCCCeeeEeccchhhhhCcccccccCCCHH
Confidence 568899999999999 9999999998876531 12233445788999999999998542 21 1111 12
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCCce-eeeeeCCcchHHHHHH
Q 014606 76 GSLNSSMEELKTVLFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSNVR-SFHLSGMGCSAGILSI 154 (421)
Q Consensus 76 ~s~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~~~-~~~i~~~~C~g~~~al 154 (421)
..+..|.+.+.+|+++|+++||+++|++++|||+||++|++++..|+.+.+|+++||+++.+. +++++ +||+|++.||
T Consensus 93 ~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~~~~-~gC~g~~~aL 171 (391)
T PLN03173 93 ARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRSSVKRFMMYQ-QGCFAGGTVL 171 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCcccHHHHHHHHHhCCCccceeeehhc-CccHHHHHHH
Confidence 236668899999999999999999999999999999998655568999999999999996664 45667 7999999999
Q ss_pred HHHHHHHHccCCCeEEEEEeccccCCCccCCCc--cchhhhcccccCcEEEEEecCCccc-cccceeeeeeeeeee-cCC
Q 014606 155 SLAKDLLRVQKNSLALVLSMESVSSNGYQGKVK--YMQLANCLFRMGGAGILLSNKKEDR-QRAKYELQHLVRTHL-GSK 230 (421)
Q Consensus 155 ~~A~~li~~g~~~~vLvv~~e~~s~~~~~~~d~--~~~~~~~lfGDGAaA~lL~~~~~~~-~~~~~~~~~~~~~~~-~t~ 230 (421)
++|.+++++++.++||||++|.+|..++++.|+ .++++..+|||||+|+||++++... ..+.|++.+.....+ .++
T Consensus 172 ~~A~~~~~~~~~~~vLVV~~E~~S~~~~~~~d~~~~~~v~~~LFGDGAaAvvl~~~~~~~~~~~~~~l~~~~~~~~~~t~ 251 (391)
T PLN03173 172 RLAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAIIIGSDPVLGVEKPLFELVSAAQTILPDSD 251 (391)
T ss_pred HHHHHHHHhCCCCeEEEEEEehhhhhhCCccccchhhhhhhhhhcCceEEEEEeCCCCCCcCCcceEEEeeeeEEecCCc
Confidence 999999999999999999999999655344443 3456789999999999999754321 112355443222222 333
Q ss_pred CccceeeeeeccCCCcceeeeChhhhHHHHHHHHHHHHHhhhhccchhHHHHHHHHhhhhhcCCCCCCCCCCCCCccccc
Q 014606 231 DTAYKCVFQEHDDEGFTGVSLSRSILQVAGEALKANMATLAAMVLPYSELVWYAVSVTWKKIWPPGRKRGPYIPDFRKAF 310 (421)
Q Consensus 231 ~~~~~~~~~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~gl~~~~~~~~~~~di 310 (421)
+... +.....| ..+.+.+++|......+. ..+.+.|.++|++ .+||
T Consensus 252 ~~~~----~~i~~~G-~~~~l~~~vp~~~~~~~~---------------------~~i~~~L~~~gl~--------~~di 297 (391)
T PLN03173 252 GAID----GHLREVG-LTFHLLKDVPGLISKNVE---------------------KSLTEAFKPLGIS--------DWNS 297 (391)
T ss_pred ccee----eEEEcCc-eEEEEecHHHHHHHHHHH---------------------HHHHHHHHhcCCC--------cccc
Confidence 3211 1111122 234556666654432221 1223456678887 4899
Q ss_pred cEEEecCCCHHHHHHHHHHCCCChhhhHHHHHHHhccCCCccchHHHHHHHHHHc----CCCCC--C-CeEEEEeecccc
Q 014606 311 EHFCVHAGGKAVIDAIKENLKLKDRDVEASKTTLYRFGNTSSSSVWYELSYLEAK----GKVKK--G-DKIWQLAFGSGF 383 (421)
Q Consensus 311 d~~i~Hq~~~~~~~~i~~~lgl~~~~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~----g~~~~--G-d~vll~~~G~G~ 383 (421)
|+|++||+|+++++.+.++||++++|+.+|+.++++||||+|||+|+.|++++++ +.+++ | +++++++||+|+
T Consensus 298 ~~~v~Hqgg~~Il~~v~~~LgL~~ekl~~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~~~~~~g~~~~~~l~~afGpG~ 377 (391)
T PLN03173 298 LFWIAHPGGPAILDQVEAKLALKPEKLRATRHVLSEYGNMSSACVLFILDEMRKKSAEDGLKSTGEGLEWGVLFGFGPGL 377 (391)
T ss_pred CeEEECCCcHHHHHHHHHHcCCChHHHHHHHHHHHHhCcchhhHHHHHHHHHHHhhhhcCCCCCCCCcceEEEEEeCchH
Confidence 9999999999999999999999999999888999999999999999999999953 44333 3 889999999999
Q ss_pred cccceeeeee
Q 014606 384 KCNSAVWKCI 393 (421)
Q Consensus 384 ~~~~~llr~~ 393 (421)
+++++++||.
T Consensus 378 t~e~~ll~~~ 387 (391)
T PLN03173 378 TVETVVLHSV 387 (391)
T ss_pred HHHHHHHhhc
Confidence 9999999993
No 15
>PLN03171 chalcone synthase-like protein; Provisional
Probab=100.00 E-value=2.9e-50 Score=405.41 Aligned_cols=351 Identities=17% Similarity=0.241 Sum_probs=259.1
Q ss_pred CceEEEEeeeecCCCCCccCHHHHHHHHHHc---CCCChHHHHHHHHHHHHcCCCCceecCCCC-CC---C-------CC
Q 014606 9 KRVYLVDFICYKAPESLRAPISAFIEHTERS---GTFDSKAVEFQTKVLERSGVGNETCLPCGT-HL---L-------PA 74 (421)
Q Consensus 9 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~---~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~-~~---~-------~~ 74 (421)
..++|.|+|+|+|++ +++|+|+.+.+... ..+ ++..+.+++|++++||++||++.+++ .. . ..
T Consensus 21 ~~~~I~gigt~~P~~--~v~n~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~~~~~~~ 97 (399)
T PLN03171 21 GLAAVLAIGTANPAN--CVPQDEFPDFYFRATKSDHL-TALKDKFKRICQELGVQKRYLHHTEELLSAHPEFLDHDAPSL 97 (399)
T ss_pred CCcEEEEEEeeCCCc--ccCHHHHHHHHHHHhccccc-HHHHHHHHHHHHhcCCCceeEeccccccccCccccccCCCCH
Confidence 568999999999999 99999999985431 112 12234578999999999999976542 10 0 11
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCCce-eeeeeCCcchHHHHH
Q 014606 75 DGSLNSSMEELKTVLFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSNVR-SFHLSGMGCSAGILS 153 (421)
Q Consensus 75 ~~s~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~~~-~~~i~~~~C~g~~~a 153 (421)
...+..|.+.+.+|+++|+++||+++|++++|||+||++|++++..|+.+.+|+++||+++.+. ++++. +||+|+++|
T Consensus 98 ~~r~~~~~~~a~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~P~~a~~v~~~LGl~~~~~~~~~~~-~gC~g~~~a 176 (399)
T PLN03171 98 DARLDIAADAVPELAAEAAKKAIAEWGRPAADITHLVVTTNSGAHIPGVDFRLVPLLGLRPSVRRTMLHL-NGCFAGAAA 176 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCchHHHHHHHhCCCcccceeeccC-CccHHHHHH
Confidence 2235668889999999999999999999999999999998444458999999999999985543 56777 599999999
Q ss_pred HHHHHHHHHccCCCeEEEEEeccccCCCccCCCcc---chhhhcccccCcEEEEEecCCccccccceeeeeeeeeeecCC
Q 014606 154 ISLAKDLLRVQKNSLALVLSMESVSSNGYQGKVKY---MQLANCLFRMGGAGILLSNKKEDRQRAKYELQHLVRTHLGSK 230 (421)
Q Consensus 154 l~~A~~li~~g~~~~vLvv~~e~~s~~~~~~~d~~---~~~~~~lfGDGAaA~lL~~~~~~~~~~~~~~~~~~~~~~~t~ 230 (421)
|++|.+++++++.++||||++|.+|..+ ++.|+. .++...+|||||+|+||++.+...+.+.+++.+..... +
T Consensus 177 L~~A~~li~~~~~~~vLVv~~e~~s~~~-~~~d~~~~~~~v~~~LFGDGAaA~vl~~~~~~~~~~~~~l~~~~~~~---~ 252 (399)
T PLN03171 177 LRLAKDLAENNRGARVLVVAAEITLLLF-NGPDEGCFQTLLNQGLFGDGAAAVIVGADADAAERPLFEIVSAAQAI---I 252 (399)
T ss_pred HHHHHHHHHhCCCCeEEEEEEecccccc-CCCCcccHHhhhccccccCccEEEEEecCCCCCCCCceEEEEeeeEE---e
Confidence 9999999999999999999999999876 333432 34457899999999999986643111234544322211 2
Q ss_pred CccceeeeeeccCCCcceeeeC-hhhhHHHHHHHHHHHHHhhhhccchhHHHHHHHHhhhhhc-CCCCCCCCCCCCCccc
Q 014606 231 DTAYKCVFQEHDDEGFTGVSLS-RSILQVAGEALKANMATLAAMVLPYSELVWYAVSVTWKKI-WPPGRKRGPYIPDFRK 308 (421)
Q Consensus 231 ~~~~~~~~~~~~~~g~~~~~l~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l-~~~gl~~~~~~~~~~~ 308 (421)
+...+.+.+.....+ +.+.+. +.+|..+.+.++..+.. .+.+.+ ...|++ .+
T Consensus 253 p~~~~~~~~~~~~~g-~~~~~~~~~vp~~i~~~l~~~l~~-----------------~l~~~~~~~~g~~--------~~ 306 (399)
T PLN03171 253 PESDDAINMHFTEGG-LDGNIGTRQVPGLIGDNIERCLLD-----------------AFAPLLGGDGGAE--------WN 306 (399)
T ss_pred cCCchheEEEEEcCC-ceEEECchhHHHHHHHHHHHHHHH-----------------HHHhhcccccCCC--------cc
Confidence 222233333211112 222344 55665554332221110 011111 134665 37
Q ss_pred cccEEEecCCCHHHHHHHHHHCCCChhhhHHHHHHHhccCCCccchHHHHHHHHHHcCC--CCCC---CeEEEEeecccc
Q 014606 309 AFEHFCVHAGGKAVIDAIKENLKLKDRDVEASKTTLYRFGNTSSSSVWYELSYLEAKGK--VKKG---DKIWQLAFGSGF 383 (421)
Q Consensus 309 did~~i~Hq~~~~~~~~i~~~lgl~~~~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~g~--~~~G---d~vll~~~G~G~ 383 (421)
||+|+ +||+|++|++.++++||++++|+..|+.++++||||+|||+|++|++++++++ +++| |++++++||+|+
T Consensus 307 di~~~-~Hq~~~~il~~v~~~Lgl~~ek~~~s~~~l~~yGNtssaSip~~L~~~~~~~~~~~~~G~~~d~vll~~fG~Gl 385 (399)
T PLN03171 307 DLFWA-VHPGSSAILDQVDAALGLEPEKLAASRRVLSDYGNMFGATVIFALDELRRQMEEAAAAGAWPELGVMMAFGPGL 385 (399)
T ss_pred cceEE-EcCCcHHHHHHHHHHcCCCHHHhHHHHHHHHHhCcchhhhHHHHHHHHHhhHhhcCCCCCCcceEEEEEEcccH
Confidence 88766 69999999999999999999999888889999999999999999999998763 6788 999999999999
Q ss_pred cccceeeeeec
Q 014606 384 KCNSAVWKCIS 394 (421)
Q Consensus 384 ~~~~~llr~~~ 394 (421)
+|++++|+|.+
T Consensus 386 t~~~~ll~~~~ 396 (399)
T PLN03171 386 TVDAMLLHASG 396 (399)
T ss_pred HHHHHHhhccc
Confidence 99999999965
No 16
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=100.00 E-value=2.1e-50 Score=398.08 Aligned_cols=320 Identities=17% Similarity=0.214 Sum_probs=248.4
Q ss_pred ceEEEEeeeecCCCCCccCHHHHHHHHHHcCCCChHHHHHHHHHHHHcCCCCceecCCCCCCCCCCCChHHHHHHHHHHH
Q 014606 10 RVYLVDFICYKAPESLRAPISAFIEHTERSGTFDSKAVEFQTKVLERSGVGNETCLPCGTHLLPADGSLNSSMEELKTVL 89 (421)
Q Consensus 10 ~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~s~~~~~~~~~~la 89 (421)
.++|.++|+|+|++ +++|+|+++.++. ++ .+|.+++||++||++.++ + ++.+|+
T Consensus 2 ~v~I~~~g~~lP~~--~v~~~e~~~~~~~----~~------~~i~~~~gi~~r~~~~~~-------~-------~~~~la 55 (326)
T CHL00203 2 GVHILSTGSSVPNF--SVENQQFEDIIET----SD------HWISTRTGIKKRHLAPSS-------T-------SLTKLA 55 (326)
T ss_pred ccEEEEEEEECCCe--EEcHHHHHHhcCC----Ch------hhEeeccCeEEEEeCCCC-------C-------CHHHHH
Confidence 57999999999999 9999999987642 22 367789999999987653 2 245899
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEec-cCCCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHHccCCCe
Q 014606 90 FSIVQDLFSKHKINPKSIDILITNC-SVSCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLRVQKNSL 168 (421)
Q Consensus 90 ~~Aa~~aL~~ag~~~~~Id~li~~s-s~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~~g~~~~ 168 (421)
.+|+++||+++|+++++||.||++| +++.. +..+..++++||++ ++++++++ ++|+|++.||++|.++|++|..++
T Consensus 56 ~~A~~~aL~~ag~~~~dId~vi~~s~~~~~~-~~~~~~v~~~Lg~~-~~~~~~v~-~~Casg~~al~~A~~~i~sg~~~~ 132 (326)
T CHL00203 56 AEAANKALDKAHMDPLEIDLIILATSTPDDL-FGSASQLQAEIGAT-RAVAFDIT-AACSGFILALVTATQFIQNGSYKN 132 (326)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeCCCCCC-CchHHHHHHHhCCC-CCceeeec-ccchhHHHHHHHHHHHHHcCCCCE
Confidence 9999999999999999999999987 55443 34578999999998 68999999 599999999999999999999999
Q ss_pred EEEEEeccccCCCccCCCccchhhhcccccCcEEEEEecCCccccccceeeeeeeeeeecCCCccceeeeeeccCCCcce
Q 014606 169 ALVLSMESVSSNGYQGKVKYMQLANCLFRMGGAGILLSNKKEDRQRAKYELQHLVRTHLGSKDTAYKCVFQEHDDEGFTG 248 (421)
Q Consensus 169 vLvv~~e~~s~~~~~~~d~~~~~~~~lfGDGAaA~lL~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~g~~~ 248 (421)
+|||++|.+|..+ ++.++. ..++|||||+|+||++.+.. +++...+.++++.++.+.....+.....
T Consensus 133 ~Lvv~~e~~s~~~-~~~~~~---~~~~fgDga~A~ll~~~~~~---------~~~~~~~~t~g~~~~~~~~~~~~~~~~~ 199 (326)
T CHL00203 133 ILVVGADTLSKWI-DWSDRK---TCILFGDGAGAAIIGASYEN---------SILGFKLCTDGKLNSHLQLMNKPVNNQS 199 (326)
T ss_pred EEEEEehhhhCcC-CcccCC---ceEEEcceeeEEEEEEcCCC---------CeEEEEEEEcCCCcceEEecCCCCCccc
Confidence 9999999999876 344544 56899999999999986542 1223344566655443332211100000
Q ss_pred eeeChhhhHHHHHHHHHHHHHhhhhccchhHHHHHHHHh----hhhhcCCCCCCCCCCCCCccccccEEEecCCCHHHHH
Q 014606 249 VSLSRSILQVAGEALKANMATLAAMVLPYSELVWYAVSV----TWKKIWPPGRKRGPYIPDFRKAFEHFCVHAGGKAVID 324 (421)
Q Consensus 249 ~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----i~~~l~~~gl~~~~~~~~~~~did~~i~Hq~~~~~~~ 324 (421)
+... ..|.. . .. .+.+++.++|+++++. +.+.|+++|++ ++|||+|++||+|.++++
T Consensus 200 ~~~~-~~~~~---~-~~------~~~~~g~~~~~~~~~~~~~~i~~~L~~~g~~--------~~did~~~~hq~~~~~~~ 260 (326)
T CHL00203 200 FGTT-KLPQG---Q-YQ------SISMNGKEVYKFAVFQVPAVIIKCLNALNIS--------IDEVDWFILHQANKRILE 260 (326)
T ss_pred cccc-ccccC---C-cc------eEEECCHHHHHHHHHHHHHHHHHHHHHcCCC--------HHHCCEEEECCCCHHHHH
Confidence 0000 00100 0 00 0112334445544443 44566789998 599999999999999999
Q ss_pred HHHHHCCCChhhhHHHHHHHhccCCCccchHHHHHHHHHHcCCCCCCCeEEEEeecccccccceeeeee
Q 014606 325 AIKENLKLKDRDVEASKTTLYRFGNTSSSSVWYELSYLEAKGKVKKGDKIWQLAFGSGFKCNSAVWKCI 393 (421)
Q Consensus 325 ~i~~~lgl~~~~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~g~~~~Gd~vll~~~G~G~~~~~~llr~~ 393 (421)
.++++||+|++|+ ..++++||||+||++|++|++++++|++++||+|++++||+|++|+++++||.
T Consensus 261 ~~~~~lgl~~~k~---~~~l~~~Gn~~sasi~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~v~~~~ 326 (326)
T CHL00203 261 AIANRLSVPNSKM---ITNLEKYGNTSAASIPLALDEAIQNNKIQPGQIIVLSGFGAGLTWGAIVLKWK 326 (326)
T ss_pred HHHHHhCCCHHHh---hhHHHhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEEEEEchhhhheEEEEEeC
Confidence 9999999999999 47999999999999999999999999999999999999999999999999994
No 17
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=100.00 E-value=3.9e-50 Score=403.42 Aligned_cols=328 Identities=19% Similarity=0.248 Sum_probs=251.3
Q ss_pred CceEEEEeeeecCCCCCccCHHHHHHHHHHcCCCChHHHHHHHHHHHHcCCCCceecCCCCCCCCCCCChHHHHHHHHHH
Q 014606 9 KRVYLVDFICYKAPESLRAPISAFIEHTERSGTFDSKAVEFQTKVLERSGVGNETCLPCGTHLLPADGSLNSSMEELKTV 88 (421)
Q Consensus 9 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~s~~~~~~~~~~l 88 (421)
.+++|.|+|+|+|++ +++|+|+.+.++ .++ ++|.+++||++|+++.++ + ++.+|
T Consensus 46 ~~~~I~g~g~~lP~~--~v~n~el~~~~~----~~~------~~i~~~tGi~~R~~~~~~-------~-------~~~~L 99 (379)
T PLN02326 46 SGSKLVGCGSAVPKL--LITNDDLSKLVD----TSD------EWIATRTGIRNRRVLSGD-------E-------TLTSL 99 (379)
T ss_pred CCcEEEEEEEECCCc--eecHHHHHHhcC----Cch------hheecccCcceEeecCCC-------C-------CHHHH
Confidence 578999999999999 999999998764 122 478889999999997543 1 24689
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEecc-CCCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHHccCCC
Q 014606 89 LFSIVQDLFSKHKINPKSIDILITNCS-VSCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLRVQKNS 167 (421)
Q Consensus 89 a~~Aa~~aL~~ag~~~~~Id~li~~ss-~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~~g~~~ 167 (421)
+++|+++||+++|++++|||+||++++ +++ .++.+..|+++||++ +++++|++ ++|+|++.||++|.+++++|..+
T Consensus 100 a~~Aa~~aL~~agi~~~dId~li~~s~~~~~-~~~~a~~v~~~LG~~-~~~~~dv~-~~Ca~~~~aL~~A~~~l~~g~~~ 176 (379)
T PLN02326 100 AVEAAKKALEMAGVDPEDVDLVLLCTSSPDD-LFGSAPQVQAALGCT-NALAFDLT-AACSGFVLGLVTAARFIRGGGYK 176 (379)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeCCCCc-cCcHHHHHHHHhCCC-CCceeecc-ccchHHHHHHHHHHHHHHcCCCC
Confidence 999999999999999999999999874 444 346789999999998 79999999 59999999999999999999999
Q ss_pred eEEEEEeccccCCCccCCCccchhhhcccccCcEEEEEecCCccccccceeeeeeeeeeecCCCccceeeeeeccCCCcc
Q 014606 168 LALVLSMESVSSNGYQGKVKYMQLANCLFRMGGAGILLSNKKEDRQRAKYELQHLVRTHLGSKDTAYKCVFQEHDDEGFT 247 (421)
Q Consensus 168 ~vLvv~~e~~s~~~~~~~d~~~~~~~~lfGDGAaA~lL~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~g~~ 247 (421)
+||||++|.++..+ ++.|+. ...+|||||+|+||++.+... . ++....+.+++..++.+.....+....
T Consensus 177 ~vLVv~~e~~s~~~-~~~d~~---~~~lfGDGAaAvlL~~~~~~~----~---~i~~~~~~t~g~~~~~~~~~~~g~~~~ 245 (379)
T PLN02326 177 NVLVIGADALSRYV-DWTDRG---TCILFGDGAGAVVLQACDDDE----D---GLLGFDMHSDGNGHKHLHATFKGEDDD 245 (379)
T ss_pred EEEEEEechhcCCC-CccccC---ceEEEcceeEEEEEEEcCCCC----C---ceEEEEEEEcCCCCCeEEecCCCCccc
Confidence 99999999998765 445554 456999999999999875431 1 123344455555554433222111000
Q ss_pred -eeeeChhhhHHHHHHHHHHHHHhhhhccchhHHHHHHHHhhh----hhcCCCCCCCCCCCCCccccccEEEecCCCHHH
Q 014606 248 -GVSLSRSILQVAGEALKANMATLAAMVLPYSELVWYAVSVTW----KKIWPPGRKRGPYIPDFRKAFEHFCVHAGGKAV 322 (421)
Q Consensus 248 -~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~----~~l~~~gl~~~~~~~~~~~did~~i~Hq~~~~~ 322 (421)
............... . .+..+.+.++++|+++++.++ +.|.++|++ .+|||+|++||+|+++
T Consensus 246 ~~~~~~~~~~~~~~~~-~----~~~~~~~~g~~v~~~~~~~~~~~i~~~L~~~gl~--------~~dId~~v~Hq~n~~~ 312 (379)
T PLN02326 246 SSGGNTNGVGDFPPKK-A----SYSCIQMNGKEVFKFAVRCVPQVIESALQKAGLT--------AESIDWLLLHQANQRI 312 (379)
T ss_pred cccccccccccccccc-c----cccceEecCHHHHHHHHHHHHHHHHHHHHHcCCC--------HHHCCEEEECCCCHHH
Confidence 000000000000000 0 000112334566766666554 446688998 4999999999999999
Q ss_pred HHHHHHHCCCChhhhHHHHHHHhccCCCccchHHHHHHHHHHcCCCCCCCeEEEEeecccccccceeeee
Q 014606 323 IDAIKENLKLKDRDVEASKTTLYRFGNTSSSSVWYELSYLEAKGKVKKGDKIWQLAFGSGFKCNSAVWKC 392 (421)
Q Consensus 323 ~~~i~~~lgl~~~~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~g~~~~Gd~vll~~~G~G~~~~~~llr~ 392 (421)
++.++++||++++|+. .++++||||+|||+|++|++++++|++++||+|++++||+|++|++++++|
T Consensus 313 ~~~~~~~Lgl~~ek~~---~~l~~~GNt~sAsi~~~L~~~~~~g~~~~Gd~vll~~~G~G~t~~~~ll~~ 379 (379)
T PLN02326 313 IDAVAQRLGIPPEKVI---SNLANYGNTSAASIPLALDEAVRSGKVKKGDVIATAGFGAGLTWGSAIVRW 379 (379)
T ss_pred HHHHHHHcCCCHHHee---ecHhhcCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEChhheeeEEEEEC
Confidence 9999999999999994 688999999999999999999999999999999999999999999999997
No 18
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=2.8e-49 Score=390.59 Aligned_cols=321 Identities=14% Similarity=0.183 Sum_probs=247.3
Q ss_pred CceEEEEeeeecCCCCCccCHHHHHHHHHHcCCCChHHHHHHHHHHHHcCCCCceecCCCCCCCCCCCChHHHHHHHHHH
Q 014606 9 KRVYLVDFICYKAPESLRAPISAFIEHTERSGTFDSKAVEFQTKVLERSGVGNETCLPCGTHLLPADGSLNSSMEELKTV 88 (421)
Q Consensus 9 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~s~~~~~~~~~~l 88 (421)
++++|.++|+|+|++ +++|+|+.+..+ ..+ +++.+++||++||++. + + .+.+|
T Consensus 3 ~~~~I~~~g~~lP~~--~v~~~~~~~~~~----~~~------~~i~~~~Gi~~R~~~~-~-------~-------~~~~l 55 (329)
T PRK07204 3 RYISIKGIGTYLPKR--KVDSLELDKKLD----LPE------GWVLKKSGVKTRHFVD-G-------E-------TSSYM 55 (329)
T ss_pred CCcEEEEEEEeCCCc--eecHHHHHHhhC----CCH------hHhhhccCceEEeecC-C-------C-------CHHHH
Confidence 357999999999999 999999998764 222 4678899999999976 2 1 13589
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEec-cCCCCCCcHHHHHHHHcCCCC-CceeeeeeCCcchHHHHHHHHHHHHHHccCC
Q 014606 89 LFSIVQDLFSKHKINPKSIDILITNC-SVSCPTPSVAAMVINKFGLKS-NVRSFHLSGMGCSAGILSISLAKDLLRVQKN 166 (421)
Q Consensus 89 a~~Aa~~aL~~ag~~~~~Id~li~~s-s~~~~~p~~a~~l~~~LGl~~-~~~~~~i~~~~C~g~~~al~~A~~li~~g~~ 166 (421)
+.+|+++||+++|++++|||+||+++ ++++..|+.+..|+++||+++ .++++|++ .+|+|+++||.+|..++++|..
T Consensus 56 a~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~p~~a~~v~~~lgl~~~~~~~~~v~-~~C~~~~~al~~a~~~l~~g~~ 134 (329)
T PRK07204 56 GAEAAKKAVEDAKLTLDDIDCIICASGTIQQAIPCTASLIQEQLGLQHSGIPCFDIN-STCLSFITALDTISYAIECGRY 134 (329)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCccHHHHHHHHhCCCCCCceEEEcc-chhHHHHHHHHHHHHHHHCCCC
Confidence 99999999999999999999999987 667778999999999999985 37999999 5999999999999999999999
Q ss_pred CeEEEEEeccccCCCccCCCccchhhhcccccCcEEEEEecCCccccccceeeeeeeeeeecCCCccceeeeeeccCCCc
Q 014606 167 SLALVLSMESVSSNGYQGKVKYMQLANCLFRMGGAGILLSNKKEDRQRAKYELQHLVRTHLGSKDTAYKCVFQEHDDEGF 246 (421)
Q Consensus 167 ~~vLvv~~e~~s~~~~~~~d~~~~~~~~lfGDGAaA~lL~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~g~ 246 (421)
++||||++|.++..+ +..++. ..++|||||+|+||++.+... + ++...+.+++..++....+..+..
T Consensus 135 ~~~Lvv~~e~~s~~~-~~~~~~---~~~lfGDGAaA~ll~~~~~~~-----~---il~~~~~t~~~~~~~~~~~~~~~~- 201 (329)
T PRK07204 135 KRVLIISSEISSVGL-NWGQNE---SCILFGDGAAAVVITKGDHSS-----R---ILASHMETYSSGAHLSEIRGGGTM- 201 (329)
T ss_pred CEEEEEEeccccCCC-CcccCc---ceEEEecccEEEEEEEcCCCC-----c---EEEEEEEEecCCCCceEEecCCcC-
Confidence 999999999988765 333333 468999999999999876432 2 233333444433222121111000
Q ss_pred ceeeeChhhhHHHHHHHHHHHHHhhhhccchhHHHHHHH----HhhhhhcCCCCCCCCCCCCCccccccEEEecCCCHHH
Q 014606 247 TGVSLSRSILQVAGEALKANMATLAAMVLPYSELVWYAV----SVTWKKIWPPGRKRGPYIPDFRKAFEHFCVHAGGKAV 322 (421)
Q Consensus 247 ~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~i~~~l~~~gl~~~~~~~~~~~did~~i~Hq~~~~~ 322 (421)
......... .. ..+ ...++++++++.+. +.+.+.|.++|++ ++|||+|++||+|.++
T Consensus 202 --~~~~~~~~~--~~--~~~-----~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~--------~~did~~~~H~~~~~~ 262 (329)
T PRK07204 202 --IHPREYSEE--RK--EDF-----LFDMNGRAIFKLSSKYLMKFIDKLLMDAGYT--------LADIDLIVPHQASGPA 262 (329)
T ss_pred --CCCcccccc--cc--cCc-----eEEECCHHHHHHHHHHHHHHHHHHHHHcCCC--------HHHCCEEEeCCCCHHH
Confidence 000000000 00 000 00122234444433 3344567789998 4999999999999999
Q ss_pred HHHHHHHCCCChhhhHHHHHHHhccCCCccchHHHHHHHHHHcCCCCCCCeEEEEeecccccccceeeee
Q 014606 323 IDAIKENLKLKDRDVEASKTTLYRFGNTSSSSVWYELSYLEAKGKVKKGDKIWQLAFGSGFKCNSAVWKC 392 (421)
Q Consensus 323 ~~~i~~~lgl~~~~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~g~~~~Gd~vll~~~G~G~~~~~~llr~ 392 (421)
++.+++.||+|++++ ..++++||||+|||+|++|++++++|++++||+|++++||+|++|++++|||
T Consensus 263 ~~~i~~~l~l~~e~~---~~~~~~~Gn~~sas~~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~ll~~ 329 (329)
T PRK07204 263 MRLIRKKLGVDEERF---VTIFEDHGNMIAASIPVALFEAIKQKKVQRGNKILLLGTSAGLSIGGILLEY 329 (329)
T ss_pred HHHHHHHcCCCHHHh---hhhHhhhCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhheeeEEeC
Confidence 999999999999998 5899999999999999999999999999999999999999999999999986
No 19
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=1.1e-48 Score=385.58 Aligned_cols=318 Identities=16% Similarity=0.258 Sum_probs=251.3
Q ss_pred CceEEEEeeeecCCCCCccCHHHHHHHHHHcCCCChHHHHHHHHHHHHcCCCCceecCCCCCCCCCCCChHHHHHHHHHH
Q 014606 9 KRVYLVDFICYKAPESLRAPISAFIEHTERSGTFDSKAVEFQTKVLERSGVGNETCLPCGTHLLPADGSLNSSMEELKTV 88 (421)
Q Consensus 9 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~s~~~~~~~~~~l 88 (421)
++++|.++|+|+|++ +++++|+.+..+ .++ +++++++||++||++.++ + ++.+|
T Consensus 3 ~~~~I~~ig~~~P~~--~v~~~e~~~~~~----~~~------~~i~~~~Gi~~r~~~~~~-------~-------~~~~l 56 (325)
T PRK12879 3 SYARITGIGTYVPPR--VLTNDDLETFID----TSD------EWIVQRTGIKERRIAHVE-------E-------YTSDL 56 (325)
T ss_pred CCCEEEEEEEECCCc--EEcHHHHHHhcC----CCH------HHhhhccCceEEEECCCC-------C-------CHHHH
Confidence 468999999999999 999999998654 222 468889999999997643 1 24589
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEec-cCCCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHHccCCC
Q 014606 89 LFSIVQDLFSKHKINPKSIDILITNC-SVSCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLRVQKNS 167 (421)
Q Consensus 89 a~~Aa~~aL~~ag~~~~~Id~li~~s-s~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~~g~~~ 167 (421)
+.+|+++||+++|+++++||+||+++ ++++..|+.+.+|++.||++ ++++++++ ++|+|++.||.+|.++|++|..+
T Consensus 57 a~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~a~~l~~~lg~~-~~~~~~v~-~~C~~~~~al~~A~~~l~~g~~~ 134 (325)
T PRK12879 57 AIKAAERALARAGLDAEDIDLIIVATTTPDYLFPSTASQVQARLGIP-NAAAFDIN-AACAGFLYGLETANGLITSGLYK 134 (325)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHhCCC-CCcEEEEC-ccchHHHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999999987 66888999999999999998 58999999 59999999999999999999999
Q ss_pred eEEEEEeccccCCCccCCCccchhhhcccccCcEEEEEecCCccccccceeeeeeeeeeecCCCccceeeeeeccCCCcc
Q 014606 168 LALVLSMESVSSNGYQGKVKYMQLANCLFRMGGAGILLSNKKEDRQRAKYELQHLVRTHLGSKDTAYKCVFQEHDDEGFT 247 (421)
Q Consensus 168 ~vLvv~~e~~s~~~~~~~d~~~~~~~~lfGDGAaA~lL~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~g~~ 247 (421)
+||||++|.++..+ +..++. ...+|||||+|+||++++... ++....+.+++..++.+.++..+..
T Consensus 135 ~~Lvv~~e~~s~~~-~~~~~~---~~~~~GDgAaA~ll~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~-- 200 (325)
T PRK12879 135 KVLVIGAERLSKVT-DYTDRT---TCILFGDGAGAVVLEATENEP--------GFIDYVLGTDGDGGDILYRTGLGTT-- 200 (325)
T ss_pred EEEEEEehhhcCcC-CccccC---ceEEEeecceEEEEEecCCCC--------CeEEEEEEEcCCCCCeEEEcCCCCC--
Confidence 99999999988765 333444 457999999999999877532 1233444455554444433221100
Q ss_pred eeeeChhhhHHHHHHHHHHHHHhhhhccchhHHHHHHHH----hhhhhcCCCCCCCCCCCCCccccccEEEecCCCHHHH
Q 014606 248 GVSLSRSILQVAGEALKANMATLAAMVLPYSELVWYAVS----VTWKKIWPPGRKRGPYIPDFRKAFEHFCVHAGGKAVI 323 (421)
Q Consensus 248 ~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~i~~~l~~~gl~~~~~~~~~~~did~~i~Hq~~~~~~ 323 (421)
...+ +. ..... ..++++++++.+.+ .+.+.|+++|++ ++|||+|++||+|.+++
T Consensus 201 ---~~~~-~~----~~~~~------~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~--------~~did~~~~h~~~~~~~ 258 (325)
T PRK12879 201 ---MDRD-AL----SGDGY------IVQNGREVFKWAVRTMPKGARQVLEKAGLT--------KDDIDWVIPHQANLRII 258 (325)
T ss_pred ---CCcc-cc----ccCcc------EEEcCHHHHHHHHHHHHHHHHHHHHHcCCC--------HHHCCEEEECCCCHHHH
Confidence 0000 00 00000 01112333443333 344667788998 49999999999999999
Q ss_pred HHHHHHCCCChhhhHHHHHHHhccCCCccchHHHHHHHHHHcCCCCCCCeEEEEeecccccccceeeeee
Q 014606 324 DAIKENLKLKDRDVEASKTTLYRFGNTSSSSVWYELSYLEAKGKVKKGDKIWQLAFGSGFKCNSAVWKCI 393 (421)
Q Consensus 324 ~~i~~~lgl~~~~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~g~~~~Gd~vll~~~G~G~~~~~~llr~~ 393 (421)
+.+++.||++++|+. .++++|||+++||+|++|++++++|.+++||+++++++|+|++|+++++||+
T Consensus 259 ~~~~~~lg~~~~~~~---~~~~~~Gn~~sas~~~~L~~~~~~g~~~~Gd~vll~~~G~G~~~~~~l~~~~ 325 (325)
T PRK12879 259 ESLCEKLGIPMEKTL---VSVEYYGNTSAATIPLALDLALEQGKIKPGDTLLLYGFGAGLTWAALLVKWG 325 (325)
T ss_pred HHHHHHcCCCHHHhh---hhHhhhCchHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhhEEEEEEeC
Confidence 999999999999995 5899999999999999999999999999999999999999999999999994
No 20
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=1.1e-48 Score=387.69 Aligned_cols=323 Identities=19% Similarity=0.192 Sum_probs=249.2
Q ss_pred CCCCceEEEEeeeecCCCCCccCHHHHHHHHHHcC---CCChHHHHHHHHHHHHcCCCCceecCCCCCCCCCCCChHHHH
Q 014606 6 NPSKRVYLVDFICYKAPESLRAPISAFIEHTERSG---TFDSKAVEFQTKVLERSGVGNETCLPCGTHLLPADGSLNSSM 82 (421)
Q Consensus 6 ~~~~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~---~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~s~~~~~ 82 (421)
|+..+++|.++|+|+|++ +++|+|+.+.++... ...+ +++.+.+||++||+..++ .+
T Consensus 1 ~~~~~v~I~~~g~~lP~~--~v~~~~~~~~~~~~~~~~~~~~------~~i~~~~Gi~~R~~~~~~-------~~----- 60 (338)
T PRK09258 1 MKYSNVAILSLAYELAPV--VVTSSEIEERLAPLYERLRLPP------GQLEALTGIRERRWWPEG-------TQ----- 60 (338)
T ss_pred CcccceEEEEEEecCCCc--cCcHHHHHHHhhhcccccCCCh------hHhhhhcCceeEecCCCC-------CC-----
Confidence 567889999999999999 999999998765321 1111 356778999999997543 22
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCccEEEEec-cCCCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHH
Q 014606 83 EELKTVLFSIVQDLFSKHKINPKSIDILITNC-SVSCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLL 161 (421)
Q Consensus 83 ~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s-s~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li 161 (421)
..+|+++|+++||+++|+++++||+||++| ++++..|+.+..|+++||++++++++|+++ +|+|++.||++|.++|
T Consensus 61 --~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~~p~~a~~v~~~lgl~~~~~~~~v~~-~C~~~~~al~~A~~~i 137 (338)
T PRK09258 61 --LSDGAIAAGRKALAEAGIDPSDIGLLINTSVCRDYLEPATACRVHHNLGLPKSCANFDVSN-ACLGFLNGMLDAANMI 137 (338)
T ss_pred --HHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHcCCCCCCceeehhh-hhHHHHHHHHHHHHHH
Confidence 358999999999999999999999999987 678889999999999999986789999995 9999999999999999
Q ss_pred HccCCCeEEEEEeccccCCCccC-----CCcc------chhhhcccccCcEEEEEecCCccccccceeeeeeeeeeecCC
Q 014606 162 RVQKNSLALVLSMESVSSNGYQG-----KVKY------MQLANCLFRMGGAGILLSNKKEDRQRAKYELQHLVRTHLGSK 230 (421)
Q Consensus 162 ~~g~~~~vLvv~~e~~s~~~~~~-----~d~~------~~~~~~lfGDGAaA~lL~~~~~~~~~~~~~~~~~~~~~~~t~ 230 (421)
++|..++||||++|.++..++.. .+.. ..+...+|||||+|+||++.+.... ..++. .....++
T Consensus 138 ~~g~~~~~Lvv~~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GDGA~A~ll~~~~~~~~--~~~~~---~~~~~~~ 212 (338)
T PRK09258 138 ELGQIDYALVVSGESAREIVEATIDRLLAPETTREDFAQSFATLTLGSGAAAAVLTRGSLHPR--GHRLL---GGVTRAA 212 (338)
T ss_pred HcCCCCEEEEEEecccchhccchhhhhccCccchhhhhhccceEEecccceEEEEecCCCCCC--cceee---eeeeecC
Confidence 99999999999999988754211 0111 1123578999999999998654211 13322 2223333
Q ss_pred CccceeeeeeccCCCcceeeeChhhhHHHHHHHHHHHHHhhhhccchhHHHHHHHHhhhhhcCCCCCCCCCCCCCccccc
Q 014606 231 DTAYKCVFQEHDDEGFTGVSLSRSILQVAGEALKANMATLAAMVLPYSELVWYAVSVTWKKIWPPGRKRGPYIPDFRKAF 310 (421)
Q Consensus 231 ~~~~~~~~~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~gl~~~~~~~~~~~di 310 (421)
+..++.+.+. ...+..+.+..... ..+...+.+.+.|.++|++ ++||
T Consensus 213 ~~~~~~~~~~-------~~~~~~~~~~~~~~------------------~~~~~~~~~~~~L~~~g~~--------~~di 259 (338)
T PRK09258 213 TEHHELCQGG-------RDGMRTDAVGLLKE------------------GVELAVDTWEAFLAQLGWA--------VEQV 259 (338)
T ss_pred CCcccccccC-------ccceEEcHHHHHHH------------------HHHHHHHHHHHHHHHcCCC--------HHHC
Confidence 3333211110 01112222222111 1112223344667788998 4999
Q ss_pred cEEEecCCCHHHHHHHHHHCCCChhhhHHHHHHHhccCCCccchHHHHHHHHHHcCCCCCCCeEEEEeecccccccceee
Q 014606 311 EHFCVHAGGKAVIDAIKENLKLKDRDVEASKTTLYRFGNTSSSSVWYELSYLEAKGKVKKGDKIWQLAFGSGFKCNSAVW 390 (421)
Q Consensus 311 d~~i~Hq~~~~~~~~i~~~lgl~~~~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~g~~~~Gd~vll~~~G~G~~~~~~ll 390 (421)
|+|++||+|+++++.+++.||+|++|+. .++++||||+++|+|++|++++++|++++||+|++++||+|++|+++++
T Consensus 260 d~~i~H~~~~~~~~~~~~~lgl~~~k~~---~~~~~~GN~~sas~~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~~~ 336 (338)
T PRK09258 260 DRVICHQVGAAHTRAILKALGIDPEKVF---TTFPTLGNMGPASLPITLAMAAEEGFLKPGDRVALLGIGSGLNCSMLEV 336 (338)
T ss_pred CEEecCCCCHHHHHHHHHHhCCCHHHce---ehHhhhCCcHHhHHHHHHHHHHHhCCCCCCCEEEEEEechhHhhHhHee
Confidence 9999999999999999999999999995 6889999999999999999999999999999999999999999999999
Q ss_pred ee
Q 014606 391 KC 392 (421)
Q Consensus 391 r~ 392 (421)
||
T Consensus 337 ~~ 338 (338)
T PRK09258 337 KW 338 (338)
T ss_pred eC
Confidence 97
No 21
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=6.6e-48 Score=357.02 Aligned_cols=346 Identities=22% Similarity=0.274 Sum_probs=283.1
Q ss_pred eEEEEeeeecCCCCCccCHHHHHHHHHHcCCCChHHHHHHHHHHH-HcCCCCceecCC-CCCCCCC--CCChHHHHHHHH
Q 014606 11 VYLVDFICYKAPESLRAPISAFIEHTERSGTFDSKAVEFQTKVLE-RSGVGNETCLPC-GTHLLPA--DGSLNSSMEELK 86 (421)
Q Consensus 11 v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~-~~GI~~R~~~~~-~~~~~~~--~~s~~~~~~~~~ 86 (421)
..|.++++++|++ .+.|.|+...+.+.+ + .+..+.+.+.+. +.+|++|+++.+ ++..+++ ++.|..|-|++.
T Consensus 2 a~i~sv~t~~Ppy--~~~Qse~~d~f~~~~-~-~~~~~~I~r~l~~~~~i~~R~~v~Pl~~y~e~~~f~ekN~ifie~a~ 77 (356)
T COG3424 2 AVIASVATALPPY--RYNQSEITDSFAELP-F-QEGREDIPRVLHANAQINRRHLVLPLDWYREPHGFGEKNEIFIEEAV 77 (356)
T ss_pred ceeeecccCCCcc--ccchHHHHHHHHHhc-c-ccchHHHHHHHhhccccccceecccHhhccCCCChhhhhhhHHHHHH
Confidence 4799999999999 999999998876542 2 222444455555 678999998654 5554443 234667899999
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHHccCC
Q 014606 87 TVLFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLRVQKN 166 (421)
Q Consensus 87 ~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~~g~~ 166 (421)
.|+++|.++||+.+++.|+|||+|+++|+++...|++..+|..+||+++++..+.+.++||+++..||..|..++++.|.
T Consensus 78 ~l~v~a~r~aL~~~~l~pedId~vv~vtsTG~~~Ps~dari~~~Lgl~p~~~Rvpv~glGCaaga~glara~~y~ra~P~ 157 (356)
T COG3424 78 PLGVDALRRALDGSPLRPEDIDAVVTVTSTGLATPSLDARIVGELGLSPDTRRVPVWGLGCAAGAAGLARARDYCRAAPD 157 (356)
T ss_pred HHHHHHHHHHhccCCCCHHHCcEEEEEeeccccCCChhHHHHhhcCCCCccceeeeecchhhhhhhHHHHHHHHHhhCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEEEEeccccCCCccCCCcc-chhhhcccccCcEEEEEecCCcccc--ccceeeeeeeeeeecCCCccceeeeeeccC
Q 014606 167 SLALVLSMESVSSNGYQGKVKY-MQLANCLFRMGGAGILLSNKKEDRQ--RAKYELQHLVRTHLGSKDTAYKCVFQEHDD 243 (421)
Q Consensus 167 ~~vLvv~~e~~s~~~~~~~d~~-~~~~~~lfGDGAaA~lL~~~~~~~~--~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~ 243 (421)
.+||||+.|.||..++...+.+ +++...+||||++|+|++.+....+ .....+.+. .+.+..++ -+.+.|..++
T Consensus 158 ~~vlvV~vELCSLt~~~~d~t~s~lVgtaLF~DG~AA~vv~gd~~~~~~~~~~p~i~~s-~StL~~ds--e~~Mgwdv~d 234 (356)
T COG3424 158 ANVLVVCVELCSLTYVFADDTKSNLVGTALFGDGAAAVVVSGDRRAEGKRPLRPDILDS-FSTLYPDS--EDIMGWDVGD 234 (356)
T ss_pred ceEEEEEeeeeeeeeecCCCCcccceeeeeecCCeeEEEEeccccccccCCCCceeccc-ccccCCcc--ccccceeecC
Confidence 9999999999998765444433 6888999999999999998654221 111222221 12333332 2345677776
Q ss_pred CCcceeeeChhhhHHHHHHHHHHHHHhhhhccchhHHHHHHHHhhhhhcCCCCCCCCCCCCCccccccEEEecCCCHHHH
Q 014606 244 EGFTGVSLSRSILQVAGEALKANMATLAAMVLPYSELVWYAVSVTWKKIWPPGRKRGPYIPDFRKAFEHFCVHAGGKAVI 323 (421)
Q Consensus 244 ~g~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~gl~~~~~~~~~~~did~~i~Hq~~~~~~ 323 (421)
+| ....+++++|.++...+.. .+...|..+|++ .+||+.|+.|+++++++
T Consensus 235 ~G-~~~vlSrdlp~lIe~~l~~---------------------~V~~fL~~~~ls--------~~dI~~w~~HPGG~KVi 284 (356)
T COG3424 235 QG-LKVVLSRDLPNLIESYLAP---------------------NVTTFLATHGLS--------IEDIEAWVVHPGGPKVI 284 (356)
T ss_pred Cc-EEEEEcCchhHHHHHHhhh---------------------hHHHHHHHcCCc--------hhhhceeeeCCCCchHH
Confidence 66 4667899999887543332 233456677888 59999999999999999
Q ss_pred HHHHHHCCCChhhhHHHHHHHhccCCCccchHHHHHHHHHHcCCCCCCCeEEEEeecccccccceeeeeec
Q 014606 324 DAIKENLKLKDRDVEASKTTLYRFGNTSSSSVWYELSYLEAKGKVKKGDKIWQLAFGSGFKCNSAVWKCIS 394 (421)
Q Consensus 324 ~~i~~~lgl~~~~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~g~~~~Gd~vll~~~G~G~~~~~~llr~~~ 394 (421)
+++.+.||+++++...||+.+++||||+||++++.|.+.+++. .++|++.+++++|+|++...++++|..
T Consensus 285 da~~~sLgls~e~l~~s~~~L~~~GNMSSatvLfVL~d~l~~~-~~~g~~Gl~~A~GPGf~sElvL~~w~~ 354 (356)
T COG3424 285 DAYEESLGLSPEALELSWDVLREYGNMSSATVLFVLEDTLQKA-PKSGSRGLMFAMGPGFCSELVLLDWEG 354 (356)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHhCCccchhhHHHHHHHHHhc-CCCCcceeeeecCCcceeeeeeEEeec
Confidence 9999999999999999999999999999999999999999976 689999999999999999999999965
No 22
>PRK06840 hypothetical protein; Validated
Probab=100.00 E-value=2.8e-47 Score=377.91 Aligned_cols=324 Identities=17% Similarity=0.192 Sum_probs=248.3
Q ss_pred CceEEEEeeeecCCCCCccCHHHHHHHHHHcCCCChHHHHHHHHHHHHcCCCCceecCCCCCCCCCCCChHHHHHHHHHH
Q 014606 9 KRVYLVDFICYKAPESLRAPISAFIEHTERSGTFDSKAVEFQTKVLERSGVGNETCLPCGTHLLPADGSLNSSMEELKTV 88 (421)
Q Consensus 9 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~s~~~~~~~~~~l 88 (421)
++++|.++|.|+|++ +++|+|+.+..+ ..+ +++.+++||++||++.++ + +..+|
T Consensus 3 ~~v~I~~~~~~lP~~--~v~~~~l~~~~g----~~~------~~~~~~~Gi~~r~~~~~~-------~-------~~~~l 56 (339)
T PRK06840 3 MNVGIVGTGVYLPKD--VMTAEEIAEKTG----IPE------EVVIEKFGIYEKPVPGPE-------D-------HTSDM 56 (339)
T ss_pred CceEEEEEEEeCCCc--ccCHHHHHHHhC----CCH------HHHhhhcCcceEeeCCCC-------C-------CHHHH
Confidence 479999999999999 999999998764 232 466788999999997643 2 24589
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEec--cCCCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHHc-cC
Q 014606 89 LFSIVQDLFSKHKINPKSIDILITNC--SVSCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLRV-QK 165 (421)
Q Consensus 89 a~~Aa~~aL~~ag~~~~~Id~li~~s--s~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~~-g~ 165 (421)
+++|+++||+++|++|++||+||+++ .+++..|+.+.+|+++||++ +++++++. ++|+|++.||.+|.+++++ +.
T Consensus 57 a~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~~p~~a~~l~~~lGl~-~~~~~~v~-~~C~~~~~al~~A~~~l~~~g~ 134 (339)
T PRK06840 57 AIAAAKPALKQAGVDPAAIDVVIYIGSEHKDYPVWSSAPKIQHEIGAK-NAWAFDIM-AVCASFPIALKVAKDLLYSDPS 134 (339)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCCCCchHHHHHHHhCCC-Cccccccc-ccchHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999999999864 45778999999999999997 68999999 5999999999999999999 77
Q ss_pred CCeEEEEEeccccCCCccCCCccchhhhcccccCcEEEEEecCCccccccceeeeeeeeeeecCCCccceeeeeeccCCC
Q 014606 166 NSLALVLSMESVSSNGYQGKVKYMQLANCLFRMGGAGILLSNKKEDRQRAKYELQHLVRTHLGSKDTAYKCVFQEHDDEG 245 (421)
Q Consensus 166 ~~~vLvv~~e~~s~~~~~~~d~~~~~~~~lfGDGAaA~lL~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~g 245 (421)
.+++|||++|..+..+ +..++... ..++|||||+|+||++++.. .+ ++.+...+++++++.+..+.++..
T Consensus 135 ~~~~Lvv~~~~~s~~~-~~~~~~~~-~~~~~GDgAaA~ll~~~~~~-----~~---il~~~~~t~~~~~~~~~~~~~g~~ 204 (339)
T PRK06840 135 IENVLLVGGYRNSDLV-DYDNPRTR-FMFNFAAGGSAALLKKDAGK-----NR---ILGSAIITDGSFSEDVRVPAGGTK 204 (339)
T ss_pred ccEEEEEeeccccccc-CcCCCCee-eeccCCCceeEEEEEecCCC-----Cc---eEEEEEEEcCCccceEEecCCCcC
Confidence 8999999999988755 22233211 11357999999999987643 22 344555677666665544432211
Q ss_pred cceeeeChhhhH-------HH-HHHHHHHHHHhhhhccchhHHHHHHHHhhhhhcCCCCCCCCCCCCCccccccEEEecC
Q 014606 246 FTGVSLSRSILQ-------VA-GEALKANMATLAAMVLPYSELVWYAVSVTWKKIWPPGRKRGPYIPDFRKAFEHFCVHA 317 (421)
Q Consensus 246 ~~~~~l~~~~p~-------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~gl~~~~~~~~~~~did~~i~Hq 317 (421)
. +...+... +. .+.++..+... ......+.+.+.|.++|++ ++|||+|++||
T Consensus 205 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~i~~~L~~~gl~--------~~did~~~~h~ 264 (339)
T PRK06840 205 Q---PASPETVENRQHYLDVIDPESMKERLDEV---------SIPNFLKVIREALRKSGYT--------PKDIDYLAILH 264 (339)
T ss_pred C---CCcccccccccceEEEcCcHHHHHHhHhh---------HHHHHHHHHHHHHHHcCCC--------HHHCCEEEECC
Confidence 0 00000000 00 00010000000 0011224455677889998 49999999999
Q ss_pred CCHHHHHHHHHHCCCChhhhHHHHHHHhccCCCccchHHHHHHHHHHcCCCCCCCeEEEEeecccccccceeeeeec
Q 014606 318 GGKAVIDAIKENLKLKDRDVEASKTTLYRFGNTSSSSVWYELSYLEAKGKVKKGDKIWQLAFGSGFKCNSAVWKCIS 394 (421)
Q Consensus 318 ~~~~~~~~i~~~lgl~~~~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~g~~~~Gd~vll~~~G~G~~~~~~llr~~~ 394 (421)
.|.++++.++++||++++|+. ++++||||+|+|+|++|.+++++|++++||++++++||+|++|+++++||.+
T Consensus 265 ~~~~~~~~~~~~Lgl~~~~~~----~~~~~Gn~~sas~~~~L~~~~~~~~~~~Gd~ill~~~G~G~s~~~~~l~~~~ 337 (339)
T PRK06840 265 MKRSAHIALLEGLGLTEEQAI----YLDEYGHLGQLDQILSLHLALEQGKLKDGDLVVLVSAGTGYTWAATVIRWGP 337 (339)
T ss_pred cCHHHHHHHHHHcCCCHHHeE----eHHhccchhhhhHHHHHHHHHHcCCCCCCCEEEEEEEehhhheeEEEEEecC
Confidence 999999999999999999983 6899999999999999999999999999999999999999999999999963
No 23
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=100.00 E-value=1.2e-46 Score=370.22 Aligned_cols=315 Identities=20% Similarity=0.302 Sum_probs=248.5
Q ss_pred ceEEEEeeeecCCCCCccCHHHHHHHHHHcCCCChHHHHHHHHHHHHcCCCCceecCCCCCCCCCCCChHHHHHHHHHHH
Q 014606 10 RVYLVDFICYKAPESLRAPISAFIEHTERSGTFDSKAVEFQTKVLERSGVGNETCLPCGTHLLPADGSLNSSMEELKTVL 89 (421)
Q Consensus 10 ~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~s~~~~~~~~~~la 89 (421)
+++|.++|+|+|++ +++++|+.+.++ .+. +++++++||++||++.++ . ++.+|+
T Consensus 1 ~~~I~~i~~~lP~~--~~~~~~~~~~~~----~~~------~~~~~~~Gi~~r~~~~~~-------~-------~~~~la 54 (320)
T cd00830 1 NARILGIGSYLPER--VVTNDELEKRLD----TSD------EWIRTRTGIRERRIADPG-------E-------TTSDLA 54 (320)
T ss_pred CCEEEEEEEECCCc--EEcHHHHHHHcC----CCH------HHhhhccCceEEeeCCCC-------C-------CHHHHH
Confidence 57999999999999 999999999764 222 467888999999998653 1 245899
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEec-cCCCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHHccCCCe
Q 014606 90 FSIVQDLFSKHKINPKSIDILITNC-SVSCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLRVQKNSL 168 (421)
Q Consensus 90 ~~Aa~~aL~~ag~~~~~Id~li~~s-s~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~~g~~~~ 168 (421)
.+|+++||+++|+++++||+||+++ ++++..|+.+.+|+.+||++ ++++++++ ++|++++.||.+|.+++++|+.++
T Consensus 55 ~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~~~~l~~~lg~~-~~~~~~v~-~~C~s~~~al~~A~~~i~~g~~~~ 132 (320)
T cd00830 55 VEAAKKALEDAGIDADDIDLIIVATSTPDYLFPATACLVQARLGAK-NAAAFDIN-AACSGFLYGLSTAAGLIRSGGAKN 132 (320)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCC-CCcEeecc-ccchHHHHHHHHHHHHHHcCCCCE
Confidence 9999999999999999999999987 56777899999999999998 79999999 599999999999999999999999
Q ss_pred EEEEEeccccCCCccCCCccchhhhcccccCcEEEEEecCCccccccceeeeeeeeeeecCCCccceeeeeeccCCCcce
Q 014606 169 ALVLSMESVSSNGYQGKVKYMQLANCLFRMGGAGILLSNKKEDRQRAKYELQHLVRTHLGSKDTAYKCVFQEHDDEGFTG 248 (421)
Q Consensus 169 vLvv~~e~~s~~~~~~~d~~~~~~~~lfGDGAaA~lL~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~g~~~ 248 (421)
||||++|.++..+ ++.++. ..++|||||+|+||++.+.. .+ ++.....+++..++.+.++..+...
T Consensus 133 vLvv~~e~~s~~~-~~~~~~---~~~~~GDgAaA~ll~~~~~~-----~~---i~~~~~~~~~~~~~~~~~~~~~~~~-- 198 (320)
T cd00830 133 VLVVGAETLSRIL-DWTDRS---TAVLFGDGAGAVVLEATEED-----PG---ILDSVLGSDGSGADLLTIPAGGSRS-- 198 (320)
T ss_pred EEEEEehhhcccc-CcccCC---ceEEEeccceEEEEEecCCC-----Cc---EEEEEEEEcCCCCCeEEeCCCCcCC--
Confidence 9999999988765 223333 56899999999999987653 22 3334555666666655554321110
Q ss_pred eeeChhhhHHHHHHHHHHHHHhhhhccchhHHHHHH----HHhhhhhcCCCCCCCCCCCCCccccccEEEecCCCHHHHH
Q 014606 249 VSLSRSILQVAGEALKANMATLAAMVLPYSELVWYA----VSVTWKKIWPPGRKRGPYIPDFRKAFEHFCVHAGGKAVID 324 (421)
Q Consensus 249 ~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~i~~~l~~~gl~~~~~~~~~~~did~~i~Hq~~~~~~~ 324 (421)
+... ... . ..++ .+..+++++.+ .+.+.+.|.++|++ ++|||+|++||+|+++++
T Consensus 199 -~~~~--~~~--~--~~~~------~~~~~~~~~~~~~~~~~~i~~~l~~~g~~--------~~di~~~~~h~~~~~~~~ 257 (320)
T cd00830 199 -PFED--AEG--G--DPYL------VMDGREVFKFAVRLMPESIEEALEKAGLT--------PDDIDWFVPHQANLRIIE 257 (320)
T ss_pred -cccc--ccc--c--CccE------EEcChHHHHHHHHhhHHHHHHHHHHcCCC--------HHHCCEEEECCCCHHHHH
Confidence 0000 000 0 0000 01111222222 23444667788998 499999999999999999
Q ss_pred HHHHHCCCChhhhHHHHHHHhccCCCccchHHHHHHHHHHcCCCCCCCeEEEEeecccccccceee
Q 014606 325 AIKENLKLKDRDVEASKTTLYRFGNTSSSSVWYELSYLEAKGKVKKGDKIWQLAFGSGFKCNSAVW 390 (421)
Q Consensus 325 ~i~~~lgl~~~~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~g~~~~Gd~vll~~~G~G~~~~~~ll 390 (421)
.+++.||++++|+ ..++++|||+++||+|++|++++++|++++||+++++++|+|++|+++++
T Consensus 258 ~~~~~lgl~~~~~---~~~~~~~Gn~~sas~~~~L~~~~~~~~~~~G~~vll~~~G~G~~~~~~l~ 320 (320)
T cd00830 258 AVAKRLGLPEEKV---VVNLDRYGNTSAASIPLALDEAIEEGKLKKGDLVLLLGFGAGLTWGAALL 320 (320)
T ss_pred HHHHHhCCCHHHh---hhhHHhhCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchHHhhHHhhC
Confidence 9999999999999 47999999999999999999999999999999999999999999999875
No 24
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=100.00 E-value=1.7e-46 Score=369.02 Aligned_cols=309 Identities=21% Similarity=0.309 Sum_probs=247.6
Q ss_pred ceEEEEeeeecCCCCCccCHHHHHHHHHHcCCCChHHHHHHHHHHHHcCCCCceecCCCCCCCCCCCChHHHHHHHHHHH
Q 014606 10 RVYLVDFICYKAPESLRAPISAFIEHTERSGTFDSKAVEFQTKVLERSGVGNETCLPCGTHLLPADGSLNSSMEELKTVL 89 (421)
Q Consensus 10 ~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~s~~~~~~~~~~la 89 (421)
.++|.++|+|+|++ +++++|+.+.++. ++ .++.+++||++|++..++ + .+.+|+
T Consensus 2 ~~~I~~i~~~~P~~--~~~~~~~~~~~~~----~~------~~i~~~~gi~~r~~~~~~-------~-------~~~~la 55 (318)
T TIGR00747 2 YAGILGTGSYLPEK--VLTNADLEKMVDT----SD------EWIVTRTGIKERRIAADD-------E-------TSSTMG 55 (318)
T ss_pred CCEEEEEEEECCCc--eecHHHHHHhcCC----ch------HHeecccCceEEEECCCC-------C-------CHHHHH
Confidence 48999999999999 9999999987642 22 357778999999997543 1 245899
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEec-cCCCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHHccCCCe
Q 014606 90 FSIVQDLFSKHKINPKSIDILITNC-SVSCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLRVQKNSL 168 (421)
Q Consensus 90 ~~Aa~~aL~~ag~~~~~Id~li~~s-s~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~~g~~~~ 168 (421)
.+|+++||+++|+++++||.||+++ ++++..|+.+..++..||++ ++++++++ ++|++++.||++|..+|++|..++
T Consensus 56 ~~A~~~al~~agl~~~~Id~~i~~~~~~~~~~~~~a~~l~~~lGl~-~~~~~~v~-~~C~s~~~al~~A~~~i~~g~~~~ 133 (318)
T TIGR00747 56 FEAAKRAIENAGISKDDIDLIIVATTTPDHAFPSAACMVQAYLGIK-GIPAFDLS-AACAGFIYALSVAKQYIESGKYKT 133 (318)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCChHHHHHHHHhCCC-CCcEeehh-hhhHHHHHHHHHHHHHHHcCCCCE
Confidence 9999999999999999999999986 66778899999999999998 58999998 699999999999999999999999
Q ss_pred EEEEEeccccCCCccCCCccchhhhcccccCcEEEEEecCCccccccceeeeeeeeeeecCCCccceeeeeeccCCC---
Q 014606 169 ALVLSMESVSSNGYQGKVKYMQLANCLFRMGGAGILLSNKKEDRQRAKYELQHLVRTHLGSKDTAYKCVFQEHDDEG--- 245 (421)
Q Consensus 169 vLvv~~e~~s~~~~~~~d~~~~~~~~lfGDGAaA~lL~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~g--- 245 (421)
+||+++|..+..+ ++.++. ...+|||||+|+||++.+... + +......+++..++.+.++.++..
T Consensus 134 ~Lvv~~e~~~~~~-~~~~~~---~~~~~GDGAaA~lL~~~~~~~-----~---i~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (318)
T TIGR00747 134 VLVVGAEKLSSTL-DWTDRG---TCVLFGDGAGAVVLGESEDPG-----G---IISTHLGADGTQGEALYLPAGGRPTSG 201 (318)
T ss_pred EEEEEehhhcCcC-CcCCCC---eEEEEecceeEEEEeecCCCC-----c---EEEEEEEEcCCCcceEEECCCCcCCCC
Confidence 9999999988665 334444 356899999999999876542 1 223344455555555444432111
Q ss_pred cceeeeChhhhHHHHHHHHHHHHHhhhhccchhHHHHH----HHHhhhhhcCCCCCCCCCCCCCccccccEEEecCCCHH
Q 014606 246 FTGVSLSRSILQVAGEALKANMATLAAMVLPYSELVWY----AVSVTWKKIWPPGRKRGPYIPDFRKAFEHFCVHAGGKA 321 (421)
Q Consensus 246 ~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~i~~~l~~~gl~~~~~~~~~~~did~~i~Hq~~~~ 321 (421)
..++.. +...++++. ..+.+.+.++++|++ ++||++|++||++++
T Consensus 202 ~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~l~~~g~~--------~~di~~~~~h~~~~~ 250 (318)
T TIGR00747 202 PSPFIT-----------------------MEGNEVFKHAVRKMGDVVEETLEANGLD--------PEDIDWFVPHQANLR 250 (318)
T ss_pred CCCceE-----------------------ECCHHHHHHHHHHHHHHHHHHHHHcCCC--------HHHCCEEEECCCCHH
Confidence 000000 001112222 223344567788998 499999999999999
Q ss_pred HHHHHHHHCCCChhhhHHHHHHHhccCCCccchHHHHHHHHHHcCCCCCCCeEEEEeecccccccceeeee
Q 014606 322 VIDAIKENLKLKDRDVEASKTTLYRFGNTSSSSVWYELSYLEAKGKVKKGDKIWQLAFGSGFKCNSAVWKC 392 (421)
Q Consensus 322 ~~~~i~~~lgl~~~~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~g~~~~Gd~vll~~~G~G~~~~~~llr~ 392 (421)
+++.+++.||+|++|+. .++++||||++||+|++|++++++|++++||+|+++++|+|++|+++++||
T Consensus 251 ~~~~~~~~lgi~~~k~~---~~~~~~Gn~~sas~~~~L~~~~~~~~~~~Gd~vll~~~G~G~t~~~~~l~~ 318 (318)
T TIGR00747 251 IIEALAKRLELDMSQVV---KTVHKYGNTSAASIPLALDELLRTGRIKPGDLLLLVAFGGGLTWGAALVRF 318 (318)
T ss_pred HHHHHHHHcCCCHHHee---ehHhhhCCHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEehhheeeEEEEEC
Confidence 99999999999999995 689999999999999999999999999999999999999999999999998
No 25
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=1.3e-45 Score=370.55 Aligned_cols=344 Identities=17% Similarity=0.162 Sum_probs=246.5
Q ss_pred ceEEEEeeeecCCCCCccCHHHHHHHHHHcCCCChHHHHHHHHHHHHcCCCCceecCCCCCCCCCCCChHHHHHHHHHHH
Q 014606 10 RVYLVDFICYKAPESLRAPISAFIEHTERSGTFDSKAVEFQTKVLERSGVGNETCLPCGTHLLPADGSLNSSMEELKTVL 89 (421)
Q Consensus 10 ~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~s~~~~~~~~~~la 89 (421)
+++|.++|+|+|++ +++|+|+.+.++..+...+ ...++|++++||++||++.++.- .++.+ ..+|+
T Consensus 2 ~v~I~gig~~lP~~--~v~n~~~~~~~~~~~~~~~---~~~~~i~~~~Gi~~R~~~~~~~~--~~~~~-------~~~La 67 (378)
T PRK06816 2 NVYITSTGAFLPGE--PVSNDEMEAYLGLINGKPS---RARRIILRNNGIKTRHYALDPEG--RPTHS-------NAQMA 67 (378)
T ss_pred CeEEEeeeecCCCC--ccCHHHHHHHHhhccCCcH---HHHHHHHHhCCCceEEEEECCCC--CCCCC-------HHHHH
Confidence 58999999999999 9999999988765321111 11258999999999999743210 01112 45899
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEec-cCCCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHHccCCCe
Q 014606 90 FSIVQDLFSKHKINPKSIDILITNC-SVSCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLRVQKNSL 168 (421)
Q Consensus 90 ~~Aa~~aL~~ag~~~~~Id~li~~s-s~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~~g~~~~ 168 (421)
++|+++||+++|++++|||+||+++ ++++..|+.+..|+++||++ ++++++++ .+|+|++.||++|..++++|..++
T Consensus 68 ~~A~~~aL~~agi~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~-~~~~~~v~-~~Cas~~~al~~A~~~i~sg~~~~ 145 (378)
T PRK06816 68 AEAIRDLLDDAGFSLGDIELLACGTSQPDQLMPGHASMVHGELGAP-PIEVVSSA-GVCAAGMMALKYAYLSVKAGESRN 145 (378)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEECCCCcCChHHHHHHHhhCCCC-CCceeeec-CcCHHHHHHHHHHHHHHHCCCCCE
Confidence 9999999999999999999999987 66788899999999999998 58999998 599999999999999999999999
Q ss_pred EEEEEeccccCCCccC--CC---------cc------chhhhcccccCcEEEEEecCCccccccceeeeeeeeeeecCCC
Q 014606 169 ALVLSMESVSSNGYQG--KV---------KY------MQLANCLFRMGGAGILLSNKKEDRQRAKYELQHLVRTHLGSKD 231 (421)
Q Consensus 169 vLvv~~e~~s~~~~~~--~d---------~~------~~~~~~lfGDGAaA~lL~~~~~~~~~~~~~~~~~~~~~~~t~~ 231 (421)
||||++|.+|..++.. .+ +. .-...++|||||+|+||++.+... ++.+ .+......++.
T Consensus 146 vLvv~~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fGDGA~A~vl~~~~~~~---g~~l-~~~~~~~~~~~ 221 (378)
T PRK06816 146 AVATASELASRWFRASRFEAEEEKLAELEENPEIAFEKDFLRWMLSDGAGAVLLENKPRPD---GLSL-RIDWIDLRSYA 221 (378)
T ss_pred EEEEeEccchhhhhhhhhhhHHHHhhcCcccCCCCCCCCCCCEeeecccEEEEEEecCCCC---CceE-EEEEEeeeccc
Confidence 9999999998765310 00 10 001245799999999999865431 1111 11111112222
Q ss_pred ccceeeeeeccCC---C-cceeee-ChhhhHHHHHHHHHHHHHhhhhccchhHHHHHH----HHhhhhhcCCCCCCCCCC
Q 014606 232 TAYKCVFQEHDDE---G-FTGVSL-SRSILQVAGEALKANMATLAAMVLPYSELVWYA----VSVTWKKIWPPGRKRGPY 302 (421)
Q Consensus 232 ~~~~~~~~~~~~~---g-~~~~~l-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~i~~~l~~~gl~~~~~ 302 (421)
..+..+....+.. + ...+.. ..+.+.. .....+.+.+ +.+++.+ ...+.+.|.++|++
T Consensus 222 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~------~~~~~~~~~~~~~~i~~~L~~~gl~---- 288 (378)
T PRK06816 222 GELPVCMYAGAEKNEDGSLKGWSDYPPEEAEA---ASALSLKQDV------RLLNENIVVYTIKPLLELVDKRNLD---- 288 (378)
T ss_pred ccCccceecCCccCCCCCccCcccCCHHHHHh---ccCchHHhHH------HHHHHHhHHHHHHHHHHHHHHcCCC----
Confidence 2222222111000 0 000000 0000000 0011122222 2233322 34455667789998
Q ss_pred CCCccccccEEEecCCCHHHHHHHHHHC-----CCChhhhHHHHHHHhccCCCccchHHHHHHHHHHcCCCCCCCeEEEE
Q 014606 303 IPDFRKAFEHFCVHAGGKAVIDAIKENL-----KLKDRDVEASKTTLYRFGNTSSSSVWYELSYLEAKGKVKKGDKIWQL 377 (421)
Q Consensus 303 ~~~~~~did~~i~Hq~~~~~~~~i~~~l-----gl~~~~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~g~~~~Gd~vll~ 377 (421)
++|||+|++||+|.++++.++++| |+|++|+. .++++||||+|||+|++|++++++|++++||+|+++
T Consensus 289 ----~~DId~~v~Hq~n~~~~~~v~~~l~~~~~gl~~~k~~---~~~~~~GNt~sAsipi~L~~a~~~g~~~~Gd~vl~~ 361 (378)
T PRK06816 289 ----PDDIDYFLPHYSSEYFREKIVELLAKAGFMIPEEKWF---TNLATVGNTGSASIYIMLDELLNSGRLKPGQKILCF 361 (378)
T ss_pred ----hhhCCEEeeCcccHHHHHHHHHHHHhccCCCChhheE---EeccccccccchHHHHHHHHHHHcCCCCCCCEEEEE
Confidence 499999999999999999999987 99999984 799999999999999999999999999999999999
Q ss_pred eeccc-ccccceeeeee
Q 014606 378 AFGSG-FKCNSAVWKCI 393 (421)
Q Consensus 378 ~~G~G-~~~~~~llr~~ 393 (421)
+.|+| +++++++|+|+
T Consensus 362 ~~~s~~~~~~~~~~~~~ 378 (378)
T PRK06816 362 VPESGRFSTAFMLLTVV 378 (378)
T ss_pred EecccchhheeEEEEEC
Confidence 88766 99999999985
No 26
>PRK04262 hypothetical protein; Provisional
Probab=100.00 E-value=4.4e-46 Score=370.18 Aligned_cols=311 Identities=16% Similarity=0.199 Sum_probs=240.0
Q ss_pred CceEEEEeeeecCCCCCccCHHHHHHHHHHcCCCChHHHHHHHHHHHHcCCCCceecCCCCCCCCCCCChHHHHHHHHHH
Q 014606 9 KRVYLVDFICYKAPESLRAPISAFIEHTERSGTFDSKAVEFQTKVLERSGVGNETCLPCGTHLLPADGSLNSSMEELKTV 88 (421)
Q Consensus 9 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~s~~~~~~~~~~l 88 (421)
++++|.++|.|+|++ +++|+|+.+.++ .++ +|+.+++||++||++.++ . +..+|
T Consensus 1 ~~v~I~~~g~ylP~~--~v~~~el~~~~~----~~~------~~i~~~~Gi~~R~~~~~~-------~-------~~~~l 54 (347)
T PRK04262 1 MMVGIVGYGAYIPRY--RIKVEEIARVWG----DDP------EAIKRGLGVEEKSVPGPD-------E-------DTATI 54 (347)
T ss_pred CceeEEEEEEeCCCE--EecHHHHHHHhC----cCH------HHHhhccCeeeeecCCCC-------c-------CHHHH
Confidence 358999999999999 999999999875 233 578889999999997543 2 24589
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEec-cCCCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHHccCCC
Q 014606 89 LFSIVQDLFSKHKINPKSIDILITNC-SVSCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLRVQKNS 167 (421)
Q Consensus 89 a~~Aa~~aL~~ag~~~~~Id~li~~s-s~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~~g~~~ 167 (421)
+.+|+++||+++|++++|||+||++| ++++..|+.+.+|+++||++++++++|++ .+|+|++.||++|.+++++|..+
T Consensus 55 a~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~~~~~~~dv~-~~C~~~~~aL~~A~~~i~sg~~~ 133 (347)
T PRK04262 55 AVEAARNALKRAGIDPKEIGAVYVGSESHPYAVKPTATIVAEALGATPDLTAADLE-FACKAGTAALQAAMGLVKSGMIK 133 (347)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEecCCCcccccHHHHHHHHcCCCCCceEEEHH-HhHHHHHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999999987 67778899999999999998668899999 59999999999999999999999
Q ss_pred eEEEEEeccccCCCccCCCccchhhhcccccCcEEEEEecCCccccccceeeeeeeeeeecCCCccceeeeeeccCC-Cc
Q 014606 168 LALVLSMESVSSNGYQGKVKYMQLANCLFRMGGAGILLSNKKEDRQRAKYELQHLVRTHLGSKDTAYKCVFQEHDDE-GF 246 (421)
Q Consensus 168 ~vLvv~~e~~s~~~~~~~d~~~~~~~~lfGDGAaA~lL~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~-g~ 246 (421)
+||||++|.... ++.++. ..+|||||+|+||++.+.. +++.+.. ...+++. + .++..+.. ..
T Consensus 134 ~aLVv~~e~~~~---~~~~~~----~~~~GDGA~A~ll~~~~~~-----~~i~~~~--~~~~d~~--d-~~~~~~~~~~~ 196 (347)
T PRK04262 134 YALAIGADTAQG---APGDAL----EYTAAAGGAAFIIGKEEVI-----AEIEATY--SYTTDTP--D-FWRREGEPYPR 196 (347)
T ss_pred EEEEEEEeeecc---CCCCCC----CCcCCCCcEEEEEecCccc-----ceeeccc--cccccch--h-hcCCCCCcCCC
Confidence 999999998422 222332 3468999999999975422 3332211 1112221 1 11111000 00
Q ss_pred ceeeeChhhhHHHHHHHHHHHHHhhhhccchhHHHHHHHHhhhhhcCCCCCCCCCCCCCccccccEEEecCCCHHHHHHH
Q 014606 247 TGVSLSRSILQVAGEALKANMATLAAMVLPYSELVWYAVSVTWKKIWPPGRKRGPYIPDFRKAFEHFCVHAGGKAVIDAI 326 (421)
Q Consensus 247 ~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~gl~~~~~~~~~~~did~~i~Hq~~~~~~~~i 326 (421)
.+..+..+ + ..++.....+.+.|.++|++ .+|||+|++||+|.++++.+
T Consensus 197 ~~~~~~~~-~----------------------~~~~~~~~~i~~~L~~~gl~--------~~dId~~v~Hq~n~~~~~~~ 245 (347)
T PRK04262 197 HGGRFTGE-P----------------------AYFKHIISAAKGLMEKLGLK--------PSDYDYAVFHQPNGKFPLRV 245 (347)
T ss_pred cCceecch-H----------------------HHHHHHHHHHHHHHHHhCcC--------HHHhceeecCCCchHHHHHH
Confidence 00111100 0 11233334555677788998 49999999999999999999
Q ss_pred HHHCCCChhhhHHHHHHHhccCCCccchHHHHHHHHHHcCCCCCCCeEEEEeecccccccceeeeeeccCC
Q 014606 327 KENLKLKDRDVEASKTTLYRFGNTSSSSVWYELSYLEAKGKVKKGDKIWQLAFGSGFKCNSAVWKCISNLR 397 (421)
Q Consensus 327 ~~~lgl~~~~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~g~~~~Gd~vll~~~G~G~~~~~~llr~~~~~~ 397 (421)
+++||+|++|+..+. ++++||||+|||+|++|+++++ ++++||+|++++||+|++++++++||++...
T Consensus 246 ~~~Lgl~~ek~~~~~-~~~~~GNt~sAsi~~~L~~~~~--~~~~Gd~vll~~~G~G~~~~~~~~~~~~~~~ 313 (347)
T PRK04262 246 AKMLGFTKEQVKPGL-LTPYIGNTYSGSALLGLAAVLD--VAKPGDRILVVSFGSGAGSDAFSITVTDAIE 313 (347)
T ss_pred HHHcCCCHHHhhccc-hhhhhCChHHHHHHHHHHHHHH--hCCCCCEEEEEecCCCcceeeEEEEechhHH
Confidence 999999999996322 5799999999999999999997 4899999999999999999999999987644
No 27
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=100.00 E-value=4.7e-46 Score=369.22 Aligned_cols=308 Identities=15% Similarity=0.170 Sum_probs=240.8
Q ss_pred eEEEEeeeecCCCCCccCHHHHHHHHHHcCCCChHHHHHHHHHHHHcCCCCceecCCCCCCCCCCCChHHHHHHHHHHHH
Q 014606 11 VYLVDFICYKAPESLRAPISAFIEHTERSGTFDSKAVEFQTKVLERSGVGNETCLPCGTHLLPADGSLNSSMEELKTVLF 90 (421)
Q Consensus 11 v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~s~~~~~~~~~~la~ 90 (421)
++|.++|.|+|++ +++|+|+.+.++. ++ +++.+++||++|+++.++ ++ +.+|++
T Consensus 2 ~~I~g~g~~lP~~--~v~n~~l~~~~~~----~~------~~i~~~~Gi~~r~v~~~~-------~~-------~~~la~ 55 (345)
T TIGR00748 2 AGIVGYGAYIPMY--RIKVEEIARVWGK----DP------ESISNGLPVEEKAVPGLD-------ED-------TATIGV 55 (345)
T ss_pred ccEEEEEEeCCCe--eecHHHHHHHhCC----CH------hHeeeccceeeeecCCCC-------CC-------HHHHHH
Confidence 6899999999999 9999999987642 33 477888999999997653 22 358999
Q ss_pred HHHHHHHHhCCCCCCCccEEEEec-cCCCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHHccCCCeE
Q 014606 91 SIVQDLFSKHKINPKSIDILITNC-SVSCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLRVQKNSLA 169 (421)
Q Consensus 91 ~Aa~~aL~~ag~~~~~Id~li~~s-s~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~~g~~~~v 169 (421)
+|+++||+++|+++++||+||++| ++++..|..+..+++.||++++++++|+. .+|+|++.||++|.++|++|..++|
T Consensus 56 ~Aa~~aL~~agl~~~dID~li~~s~~~~~~~p~~a~~v~~~LGl~~~~~~~dv~-~aC~g~~~al~~A~~~i~sg~~~~v 134 (345)
T TIGR00748 56 EAARNALKRAKIDPKDIGAVYVGSESHPYAVKPTATIVAEAIGATPDLTAADLE-FACKAGTAGIQACMGLVASGMIKYG 134 (345)
T ss_pred HHHHHHHHHcCCCHHHCCEEEEEecCCCccccchHHHHHHHcCCCCCceEEEHH-HhHHHHHHHHHHHHHHHHcCCCCEE
Confidence 999999999999999999999987 67788899999999999997678999999 5999999999999999999999999
Q ss_pred EEEEeccccCCCccCCCccchhhhcccccCcEEEEEecCCccccccceeeeeeeeeeecCCCccceeeeeeccCCCccee
Q 014606 170 LVLSMESVSSNGYQGKVKYMQLANCLFRMGGAGILLSNKKEDRQRAKYELQHLVRTHLGSKDTAYKCVFQEHDDEGFTGV 249 (421)
Q Consensus 170 Lvv~~e~~s~~~~~~~d~~~~~~~~lfGDGAaA~lL~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~g~~~~ 249 (421)
|||++|..+.. +.|+. ..+|||||+|+||++++.. .++.+. ....+++. ..+...+ .. +
T Consensus 135 LVv~~d~~~~~---~~~~~----~~~~GDGAaA~vl~~~~~~-----~~~~~~--~~~~~d~~---~~~~~~~-~~---~ 193 (345)
T TIGR00748 135 LAIGADTAQGA---PGDAL----EYTAGAGGAAYIIGEKNTV-----AYFEGT--YSYTTDTP---DFWRREG-EP---Y 193 (345)
T ss_pred EEEEEeecccC---CCccC----cccCCCceEEEEEccCCcc-----eEeecc--cceecccc---cccccCC-Cc---C
Confidence 99999998642 22332 3578999999999976532 122111 11122221 1111100 00 0
Q ss_pred eeChhhhHHHHHHHHHHHHHhhhhccchhHHHHHHHHhhhhhcCCCCCCCCCCCCCccccccEEEecCCCHHHHHHHHHH
Q 014606 250 SLSRSILQVAGEALKANMATLAAMVLPYSELVWYAVSVTWKKIWPPGRKRGPYIPDFRKAFEHFCVHAGGKAVIDAIKEN 329 (421)
Q Consensus 250 ~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~gl~~~~~~~~~~~did~~i~Hq~~~~~~~~i~~~ 329 (421)
..... .+ . ...+++++++..+.+.|.++|++ .+|||+|++||+|.++++.+.++
T Consensus 194 ~~~~~--~~-----------~-----~~~~~~~~~~~~~~~~L~~~gl~--------~~did~~i~Hq~~~~~~~~~~~~ 247 (345)
T TIGR00748 194 PRHGG--RF-----------T-----GEPAYFHHVVTAAKGLMEKLGLT--------PEDFDYAVFHQPNGKFYLVAARM 247 (345)
T ss_pred CCcCC--ee-----------c-----ChHHHHHHHHHHHHHHHHHcCCC--------HHHcCEEEeCCCChHHHHHHHHH
Confidence 00000 00 0 00134566666777788889998 49999999999999999999999
Q ss_pred CCCChhhhHHHHHH--HhccCCCccchHHHHHHHHHHcCCCCCCCeEEEEeecccccccceeeeeeccCC
Q 014606 330 LKLKDRDVEASKTT--LYRFGNTSSSSVWYELSYLEAKGKVKKGDKIWQLAFGSGFKCNSAVWKCISNLR 397 (421)
Q Consensus 330 lgl~~~~~~~s~~~--l~~~Gn~~sasi~i~L~~~~~~g~~~~Gd~vll~~~G~G~~~~~~llr~~~~~~ 397 (421)
||++++|+. .+ .++||||++||+|++|+++++ .+++||+|++++||+|++|+++++||++...
T Consensus 248 lgl~~ek~~---~~~~~~~~GNt~sAsipl~L~~~~~--~~~~Gd~vll~~~G~G~s~~~~~~~~~~~~~ 312 (345)
T TIGR00748 248 LGFPKEQVK---PGLLTPRIGNTYSGATPVGLSAVLD--IAEPGDRILAVSYGSGAGSDAFSIVVQDAIE 312 (345)
T ss_pred cCCCHHHee---ccccccccCchhhhHHHHHHHHHHH--hcCCCCEEEEEEecCCcceeEEEEEEchhHH
Confidence 999999995 43 389999999999999999987 6899999999999999999999999987555
No 28
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=3.1e-45 Score=360.13 Aligned_cols=314 Identities=20% Similarity=0.292 Sum_probs=247.3
Q ss_pred CCceEEEEeeeecCCCCCccCHHHHHHHHHHcCCCChHHHHHHHHHHHHcCCCCceecCCCCCCCCCCCChHHHHHHHHH
Q 014606 8 SKRVYLVDFICYKAPESLRAPISAFIEHTERSGTFDSKAVEFQTKVLERSGVGNETCLPCGTHLLPADGSLNSSMEELKT 87 (421)
Q Consensus 8 ~~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~s~~~~~~~~~~ 87 (421)
+..++|.++|+|+|++ +++++|+.+..+. ++ ++|.+++||++|+++.++ . +..+
T Consensus 1 ~~~v~I~ai~~~lP~~--~~~~~~~~~~~~~----~~------~~i~~~~gi~~r~~~~~~-------~-------~~~~ 54 (319)
T PRK09352 1 MMYAKILGTGSYLPER--VVTNDDLEKMVDT----SD------EWIVTRTGIKERRIAAPD-------E-------TTSD 54 (319)
T ss_pred CCceEEEEEEEECCCe--EEcHHHHHHHcCC----CH------HHhhhhcCeEEEEeCCCC-------C-------CHHH
Confidence 3578999999999999 9999999997642 22 367788999999986543 1 2458
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEec-cCCCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHHccCC
Q 014606 88 VLFSIVQDLFSKHKINPKSIDILITNC-SVSCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLRVQKN 166 (421)
Q Consensus 88 la~~Aa~~aL~~ag~~~~~Id~li~~s-s~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~~g~~ 166 (421)
|+.+|++++|+++|+++++||.||+++ ++++..|+.+..|+.+||+. ++++++++ .+|++++.||..|.++|++|..
T Consensus 55 la~~A~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~~~i~~~lG~~-~~~~~~v~-~~Casg~~al~~A~~~i~~g~~ 132 (319)
T PRK09352 55 LATEAAKKALEAAGIDPEDIDLIIVATTTPDYAFPSTACLVQARLGAK-NAAAFDLS-AACSGFVYALSTADQFIRSGAY 132 (319)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCchHHHHHHHHhCCC-CCcEeecc-ccchhHHHHHHHHHHHHHcCCC
Confidence 999999999999999999999999987 56767889999999999996 78999999 5999999999999999999999
Q ss_pred CeEEEEEeccccCCCccCCCccchhhhcccccCcEEEEEecCCccccccceeeeeeeeeeecCCCccceeeeeeccCCCc
Q 014606 167 SLALVLSMESVSSNGYQGKVKYMQLANCLFRMGGAGILLSNKKEDRQRAKYELQHLVRTHLGSKDTAYKCVFQEHDDEGF 246 (421)
Q Consensus 167 ~~vLvv~~e~~s~~~~~~~d~~~~~~~~lfGDGAaA~lL~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~g~ 246 (421)
++|||+++|.++..+ +..++. ...+|||||+|+||++++... +....+.+++..++.+..+.++...
T Consensus 133 ~~vLvv~~e~~s~~~-~~~~~~---~~~~~gDGaaA~ll~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (319)
T PRK09352 133 KNVLVIGAEKLSRIV-DWTDRS---TCVLFGDGAGAVVLGASEEPG---------ILSTHLGSDGSYGDLLYLPGGGSRG 199 (319)
T ss_pred CEEEEEEehhhcccc-CcccCC---ceEEEeccceEEEEEEcCCCC---------eEEEEEEEcCCCCCeEEeCCCCCCC
Confidence 999999999988764 223333 457999999999999976431 2223444555554444333221100
Q ss_pred ceeeeChhhhHHHHHHHHHHHHHhhhhccchhHHHHH----HHHhhhhhcCCCCCCCCCCCCCccccccEEEecCCCHHH
Q 014606 247 TGVSLSRSILQVAGEALKANMATLAAMVLPYSELVWY----AVSVTWKKIWPPGRKRGPYIPDFRKAFEHFCVHAGGKAV 322 (421)
Q Consensus 247 ~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~i~~~l~~~gl~~~~~~~~~~~did~~i~Hq~~~~~ 322 (421)
..... ++. ++++++++. ..+.+.++|.++|++ ++|||+|++||+|.++
T Consensus 200 ---~~~~~-----------~~~------~~~~~~~~~~~~~~~~~i~~~l~~~g~~--------~~di~~~~~h~~~~~~ 251 (319)
T PRK09352 200 ---PASPG-----------YLR------MEGREVFKFAVRELAKVAREALEAAGLT--------PEDIDWLVPHQANLRI 251 (319)
T ss_pred ---CCCCC-----------ceE------ECCHHHHHHHHHHHHHHHHHHHHHcCCC--------HHHCCEEEECCCCHHH
Confidence 00000 000 001111222 223444667788998 4999999999999999
Q ss_pred HHHHHHHCCCChhhhHHHHHHHhccCCCccchHHHHHHHHHHcCCCCCCCeEEEEeecccccccceeeeee
Q 014606 323 IDAIKENLKLKDRDVEASKTTLYRFGNTSSSSVWYELSYLEAKGKVKKGDKIWQLAFGSGFKCNSAVWKCI 393 (421)
Q Consensus 323 ~~~i~~~lgl~~~~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~g~~~~Gd~vll~~~G~G~~~~~~llr~~ 393 (421)
++.+++.||+|++++ ..++.+|||+++||++++|++++++|++++||+++++++|+|++|+++++||+
T Consensus 252 ~~~~~~~lg~~~~~~---~~~~~~~Gn~~~a~~~~~L~~~~~~g~~~~Gd~vll~s~G~G~~~~~~ll~~~ 319 (319)
T PRK09352 252 IDATAKKLGLPMEKV---VVTVDKYGNTSAASIPLALDEAVRDGRIKRGDLVLLEGFGGGLTWGAALVRWP 319 (319)
T ss_pred HHHHHHHhCCCHHHh---hhhHHhhCCHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhheeEEEEEEeC
Confidence 999999999999998 47899999999999999999999999999999999999999999999999985
No 29
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=2.4e-43 Score=353.82 Aligned_cols=343 Identities=14% Similarity=0.181 Sum_probs=241.7
Q ss_pred CceEEEEeeeecCCCCCccCHHHHHHHHHHcC-CCChHH---H----------HHHHHHHHHcCCCCceecCCC-CCCC-
Q 014606 9 KRVYLVDFICYKAPESLRAPISAFIEHTERSG-TFDSKA---V----------EFQTKVLERSGVGNETCLPCG-THLL- 72 (421)
Q Consensus 9 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~-~~~~~~---~----------~~~~~i~~~~GI~~R~~~~~~-~~~~- 72 (421)
++++|.++|+|+|++ +++|+|+.+.++... .++.+. . ...++|++++||++||++.++ ....
T Consensus 1 ~~~~I~~~g~~lP~~--~v~n~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~ 78 (372)
T PRK07515 1 HNVVISGTGLYTPPE--SISNEELVASFNAYVERFNAENAAAIAAGEVEALQPSSSEFIEKASGIKSRYVMDKEGILDPD 78 (372)
T ss_pred CCcEEEEEEeecCCc--cccHHHHHHHHhhhhhhhcccchhhhccccccccCCCCHHHhhhccCCceEEEecccccCccc
Confidence 368999999999999 999999998864210 111000 0 013678889999999997531 1100
Q ss_pred ----CCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCccEEEEec-cCCCCCCcHHHHHHHHcCCCCCceeeeeeCCcc
Q 014606 73 ----PADGSLNSSMEELKTVLFSIVQDLFSKHKINPKSIDILITNC-SVSCPTPSVAAMVINKFGLKSNVRSFHLSGMGC 147 (421)
Q Consensus 73 ----~~~~s~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s-s~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C 147 (421)
..+.........+.+|+++|+++||+++|+++++||.||+++ ++++..|+.+..|++.||++ +++++++ ++|
T Consensus 79 ~~~~~~~~r~~~~~~~~~~la~~Aa~~aL~~agl~~~~Id~li~~~~~~~~~~p~~a~~v~~~Lgl~--~~~~~v~-~aC 155 (372)
T PRK07515 79 RMRPRIPERSNDELSIQAEMGVAAARQALARAGRTAEDIDAVIVACSNMQRAYPAMAIEIQQALGIE--GFAFDMN-VAC 155 (372)
T ss_pred ccCcccccccccchhhHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhcCCC--CcEEEec-chh
Confidence 001111111124578999999999999999999999999987 56788999999999999996 6889999 599
Q ss_pred hHHHHHHHHHHHHHHccCCCeEEEEEeccccCCCccCCCccchhhhcccccCcEEEEEecCCccccccceeeeeeeeeee
Q 014606 148 SAGILSISLAKDLLRVQKNSLALVLSMESVSSNGYQGKVKYMQLANCLFRMGGAGILLSNKKEDRQRAKYELQHLVRTHL 227 (421)
Q Consensus 148 ~g~~~al~~A~~li~~g~~~~vLvv~~e~~s~~~~~~~d~~~~~~~~lfGDGAaA~lL~~~~~~~~~~~~~~~~~~~~~~ 227 (421)
+|++.||.+|.++|++|..++|||+++|.++..+ ++.|+. ..++|||||+|+||++.+.....+.+++.+ +..
T Consensus 156 asg~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~-~~~d~~---~~~lfGDgAaA~vL~~~~~~~~~~~~~il~---~~~ 228 (372)
T PRK07515 156 SSATFGIQTAANAIRSGSARRVLVVNPEICSGHL-NFRDRD---SHFIFGDVATAVIVERADTATSAGGFEILG---TRL 228 (372)
T ss_pred HHHHHHHHHHHHHHHcCCCCEEEEEeeecccccc-cccCCC---CCEEecCccEEEEEeeccccccCCCceEEE---EEe
Confidence 9999999999999999999999999999988765 334554 468999999999999865432111233332 222
Q ss_pred cCCCccceeeeeeccCCCcceeeeChhhhHHHHHHHHHHHHHhhhhccchhHHHHHHH----HhhhhhcCCCCCCCCCCC
Q 014606 228 GSKDTAYKCVFQEHDDEGFTGVSLSRSILQVAGEALKANMATLAAMVLPYSELVWYAV----SVTWKKIWPPGRKRGPYI 303 (421)
Q Consensus 228 ~t~~~~~~~~~~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~i~~~l~~~gl~~~~~~ 303 (421)
.++. .+.+..+. |.. .....+.+... ... +.+++.++|++++ +.+.+.|.++|++
T Consensus 229 ~~~~--~~~~~~~~---G~~-~~~~~~~~~~~----~~~------~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~----- 287 (372)
T PRK07515 229 FTQF--SNNIRNNF---GFL-NRADPEGIGAR----DKL------FVQEGRKVFKEVCPMVAEHIVEHLAENGLT----- 287 (372)
T ss_pred eccc--ccceecCC---CCC-CCCCccccccc----cce------EEeccHHHHHHHHHHHHHHHHHHHHHcCCC-----
Confidence 2221 12111111 100 00000000000 000 0112233333333 3445667789998
Q ss_pred CCccccccEEEecCCCHHHHHHHHHH-CCC--ChhhhHHHHHHHhccCCCccchHHHHHHHHHHcCCCCCCCeEEEEeec
Q 014606 304 PDFRKAFEHFCVHAGGKAVIDAIKEN-LKL--KDRDVEASKTTLYRFGNTSSSSVWYELSYLEAKGKVKKGDKIWQLAFG 380 (421)
Q Consensus 304 ~~~~~did~~i~Hq~~~~~~~~i~~~-lgl--~~~~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~g~~~~Gd~vll~~~G 380 (421)
++|||+|++||+|.++++.+.++ ||+ ++++. +.++++||||+|||+|++|+++. +++++||+|++++||
T Consensus 288 ---~~dId~~~~Hq~~~~~~d~~~~~llg~~~~~~~~---~~~~~~~GNt~sasi~~~L~~~~--~~~~~Gd~vll~~~G 359 (372)
T PRK07515 288 ---PADVKRFWLHQANINMNQLIGKKVLGRDATPEEA---PVILDEYANTSSAGSIIAFHKHS--DDLAAGDLGVICSFG 359 (372)
T ss_pred ---HHHCCEEEECCCCHHHHHHHHHHhccCCCChhhc---eEeHHhcCCchhhHHHHHHHHHh--ccCCCCCEEEEEEec
Confidence 49999999999999999999988 564 45665 47899999999999999999985 468999999999999
Q ss_pred ccccccceeeee
Q 014606 381 SGFKCNSAVWKC 392 (421)
Q Consensus 381 ~G~~~~~~llr~ 392 (421)
+|++|++++||.
T Consensus 360 ~G~~~~~~ll~~ 371 (372)
T PRK07515 360 AGYSIGSVIVRK 371 (372)
T ss_pred ccHHHHHHHhcc
Confidence 999999999985
No 30
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane
Probab=100.00 E-value=3.1e-42 Score=324.15 Aligned_cols=287 Identities=54% Similarity=0.934 Sum_probs=270.8
Q ss_pred ccCCCCceEEEEeeeecCCCCCccCHHHHHHHHHHcCCCChHHHHHHHHHHHHcCCCCceecCCCCCCCCCCCChHHHHH
Q 014606 4 FRNPSKRVYLVDFICYKAPESLRAPISAFIEHTERSGTFDSKAVEFQTKVLERSGVGNETCLPCGTHLLPADGSLNSSME 83 (421)
Q Consensus 4 ~~~~~~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~s~~~~~~ 83 (421)
+++++++||++..++|.|+..++++.+++++++...+.++++.++|+++|++++||.++.+.|+..+..+++.++..+.+
T Consensus 2 ~~~R~r~VYLvDfac~kP~~~~~v~~~~~~e~~~~~~~f~~~sl~F~~kIlerSGlG~eTy~P~~~~~~p~~~s~~~a~~ 81 (290)
T PF08392_consen 2 FMRRPRPVYLVDFACYKPPDELRVSREEFIEHARRCGRFDEESLDFQRKILERSGLGDETYLPPALHEIPPDPSLAAARE 81 (290)
T ss_pred ccCCCCCEEEEeeeecCCCcccccCHHHHHHHHHhcccCChhHHHHHHHHHHhcCCCccccCCcccccCCCcccHHHHHH
Confidence 67788899999999999999889999999999988888999999999999999999999999888877777888889999
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHHc
Q 014606 84 ELKTVLFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLRV 163 (421)
Q Consensus 84 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~~ 163 (421)
++..++..|++++|+++|++|+|||.||++|+.+++.|+++++|.+++|+++++..+++.++||++++.+|++|+++++.
T Consensus 82 Eae~v~f~av~~LL~ktgv~p~dIdiLVvncs~f~ptPSLsamIvnr~~mr~di~~~nLsGMGCsAgliai~lA~~lL~~ 161 (290)
T PF08392_consen 82 EAEMVIFGAVDDLLAKTGVKPSDIDILVVNCSLFNPTPSLSAMIVNRYGMRSDIKSYNLSGMGCSAGLIAIDLAKDLLQA 161 (290)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEECcCCCcCCcHHHHHHHHhCCCcCeeeecccCCcchhhHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCeEEEEEeccccCCCccCCCccchhhhcccccCcEEEEEecCCccccccceeeeeeeeeeecCCCccceeeeeeccC
Q 014606 164 QKNSLALVLSMESVSSNGYQGKVKYMQLANCLFRMGGAGILLSNKKEDRQRAKYELQHLVRTHLGSKDTAYKCVFQEHDD 243 (421)
Q Consensus 164 g~~~~vLvv~~e~~s~~~~~~~d~~~~~~~~lfGDGAaA~lL~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~ 243 (421)
.+..+||||+.|.++..+|.++||..++++.+|+|||+|+||++.+.....+.|++.+.+.++.+.++..|.++++.+++
T Consensus 162 ~p~~~ALVVstE~~s~~~Y~G~~rsmlv~NcLFr~GgAAvLLSn~~~~~~~aky~L~~~vRt~~g~~d~ay~~v~q~eD~ 241 (290)
T PF08392_consen 162 HPNSYALVVSTENISANWYRGNDRSMLVSNCLFRMGGAAVLLSNKPSDRRRAKYELLHTVRTHTGADDDAYRCVFQEEDE 241 (290)
T ss_pred CCCcEEEEEEEeecccccccCCcHHHhhccccccCCceeEEeecCccccccchhhhhheeeeecCCCCCceeeEEEeEcC
Confidence 99999999999999998888899999999999999999999999887655678999999999998888999999999999
Q ss_pred CCcceeeeChhhhHHHHHHHHHHHHHhhhhccchhHHHHHHHHhhhh
Q 014606 244 EGFTGVSLSRSILQVAGEALKANMATLAAMVLPYSELVWYAVSVTWK 290 (421)
Q Consensus 244 ~g~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 290 (421)
+|..|+.++++++...+++++.+++.++|.++|..|.++++...+.+
T Consensus 242 ~g~~Gv~lsk~l~~vag~al~~ni~~l~p~vLP~sE~~~~~~~~~~r 288 (290)
T PF08392_consen 242 EGIVGVSLSKDLMKVAGKALKANITTLGPLVLPLSEQLRFAASFIAR 288 (290)
T ss_pred CCceEEEEecchHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999877654
No 31
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=100.00 E-value=4e-41 Score=331.43 Aligned_cols=310 Identities=20% Similarity=0.226 Sum_probs=236.3
Q ss_pred ceEEEEeeeecCCCCCccCHHHHHHHHHHcCCCChHHHHHHHHHHHHcCCCCceecCCCCCCCCCCCChHHHHHHHHHHH
Q 014606 10 RVYLVDFICYKAPESLRAPISAFIEHTERSGTFDSKAVEFQTKVLERSGVGNETCLPCGTHLLPADGSLNSSMEELKTVL 89 (421)
Q Consensus 10 ~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~s~~~~~~~~~~la 89 (421)
.++|.++|+|+|++ +++|+++.+.++. .++.+.+||++|++..++ .+ ..+|+
T Consensus 1 ~v~I~~i~~~lP~~--~v~~~~~~~~~~~------------~~~~~~~gi~~r~~~~~~-------~~-------~~~l~ 52 (324)
T cd00827 1 DVGIEAIGAYLPRY--RVDNEELAEGLGV------------DPGKYTTGIGQRHMAGDD-------ED-------VPTMA 52 (324)
T ss_pred CccEEEEEecCCce--eecHHHHHHHhCC------------CcceeeeecceeEecCCC-------CC-------HHHHH
Confidence 37899999999999 9999999987641 145667999999997542 11 35799
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEec-cCCCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHHccCCCe
Q 014606 90 FSIVQDLFSKHKINPKSIDILITNC-SVSCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLRVQKNSL 168 (421)
Q Consensus 90 ~~Aa~~aL~~ag~~~~~Id~li~~s-s~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~~g~~~~ 168 (421)
.+|++++|+++|+++++||+||+++ +++...|+.+.+|++.||++ ++++++++ ++|+|++.||.+|.++|++|..++
T Consensus 53 ~~a~~~aL~~ag~~~~~Id~li~~~~~~~~~~~~~~~~i~~~lg~~-~~~~~~v~-~~C~s~~~al~~A~~~i~~g~~~~ 130 (324)
T cd00827 53 VEAARRALERAGIDPDDIGLLIVATESPIDKGKSAATYLAELLGLT-NAEAFDLK-QACYGGTAALQLAANLVESGPWRY 130 (324)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCccHHHHHHHHcCCC-CCceeehh-hhhHHHHHHHHHHHHHHHcCCCCE
Confidence 9999999999999999999999986 55566889999999999998 79999999 599999999999999999999999
Q ss_pred EEEEEeccccCCCccCCCccchhhhcccccCcEEEEEecCCccccccceeeeeeeeeeecCCCccce---eeeeeccCC-
Q 014606 169 ALVLSMESVSSNGYQGKVKYMQLANCLFRMGGAGILLSNKKEDRQRAKYELQHLVRTHLGSKDTAYK---CVFQEHDDE- 244 (421)
Q Consensus 169 vLvv~~e~~s~~~~~~~d~~~~~~~~lfGDGAaA~lL~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~---~~~~~~~~~- 244 (421)
|||+++|.++.... ...+ ..++|||||+|+||++.+... .++ +..+...+++..++ .........
T Consensus 131 vlvv~~e~~~~~~~-~~~~----~~~~~gdgaaA~ll~~~~~~~---~~~---i~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (324)
T cd00827 131 ALVVASDIASYLLD-EGSA----LEPTLGDGAAAMLVSRNPGIL---AAG---IVSTHSTSDPGYDFSPYPVMDGGYPKP 199 (324)
T ss_pred EEEEEEHHhhhccc-CCCC----ccccccCceEEEEEecCcccc---cCC---ceeeeeecccccccCccceeccCCCcc
Confidence 99999999887642 1122 467999999999999876521 122 33344444544322 000000000
Q ss_pred ----CcceeeeCh---hhhHHHHHHHHHHHHHhhhhccchhHHHHHHHHhhhhhcCCCCCCCCCCCCCccccccEEEecC
Q 014606 245 ----GFTGVSLSR---SILQVAGEALKANMATLAAMVLPYSELVWYAVSVTWKKIWPPGRKRGPYIPDFRKAFEHFCVHA 317 (421)
Q Consensus 245 ----g~~~~~l~~---~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~gl~~~~~~~~~~~did~~i~Hq 317 (421)
....+.... +++ ....+.....+.++|.+.|++ +||++|++||
T Consensus 200 ~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~l~~~~~~---------~~i~~~~~h~ 249 (324)
T cd00827 200 CKLAYAIRLTAEPAGRAVF---------------------EAAHKLIAKVVRKALDRAGLS---------EDIDYFVPHQ 249 (324)
T ss_pred hhhhhhcceeecCCccchH---------------------HHHhHHHHHHHHHHHHHcccc---------cccceeeccC
Confidence 000011110 000 011122223344566666664 6899999999
Q ss_pred CCH-HHHHHHHHHCCCChhhhHHHHH-HHhccCCCccchHHHHHHHHHHcCCCCCCCeEEEEeecccccccceee
Q 014606 318 GGK-AVIDAIKENLKLKDRDVEASKT-TLYRFGNTSSSSVWYELSYLEAKGKVKKGDKIWQLAFGSGFKCNSAVW 390 (421)
Q Consensus 318 ~~~-~~~~~i~~~lgl~~~~~~~s~~-~l~~~Gn~~sasi~i~L~~~~~~g~~~~Gd~vll~~~G~G~~~~~~ll 390 (421)
+|. .+++.++++|+++++++..++. ++++|||+++|++|++|+++++++++++||+|+++++|+|++|+++++
T Consensus 250 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~~~~~~~Gd~vl~~~~G~G~~~~~~~~ 324 (324)
T cd00827 250 PNGKKILEAVAKKLGGPPEKASQTRWILLRRVGNMYAASILLGLASLLESGKLKAGDRVLLFSYGSGFTAEAFVL 324 (324)
T ss_pred chHHHHHHHHHHHccchHhhhccchhhHHHHhCchHHHHHHHHHHHHHhcCCCCCCCEEEEEEeccchhheeccC
Confidence 999 9999999999999999875442 899999999999999999999999999999999999999999998864
No 32
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.
Probab=100.00 E-value=3.2e-39 Score=323.91 Aligned_cols=308 Identities=18% Similarity=0.202 Sum_probs=228.9
Q ss_pred eEEEEeeeecCCCCCccCHHHHHHHHHHcCCCChHHHHHHHHHHHHcCCCCceecCCCCCCCCCCCChHHHHHHHHHHHH
Q 014606 11 VYLVDFICYKAPESLRAPISAFIEHTERSGTFDSKAVEFQTKVLERSGVGNETCLPCGTHLLPADGSLNSSMEELKTVLF 90 (421)
Q Consensus 11 v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~s~~~~~~~~~~la~ 90 (421)
|+|.++|.|+|++ +++++|+.+..+ .++ +++.+.+|+++|++..++ |++.+|++
T Consensus 1 iGI~~i~~y~P~~--~v~~~ela~~~g----~~~------~~~~~g~G~~~~~~~~~~--------------ed~~~la~ 54 (379)
T TIGR01835 1 IGIDKISFFTPQN--YLDMTALAEARG----VDP------EKFHIGIGQKKMAVPPID--------------EDIVTMAA 54 (379)
T ss_pred CCEeEEEEECCCE--EeeHHHHHHHhC----CCH------HHHHhhcCceEEeeCCCC--------------CCHHHHHH
Confidence 5899999999999 999999998764 344 467788999999987543 12468999
Q ss_pred HHHHHHHHhCCCCCCCccEEEEec-cCCCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHHccCCCeE
Q 014606 91 SIVQDLFSKHKINPKSIDILITNC-SVSCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLRVQKNSLA 169 (421)
Q Consensus 91 ~Aa~~aL~~ag~~~~~Id~li~~s-s~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~~g~~~~v 169 (421)
+|+++||+++ ++++||+||++| ++++..|+.+..|++.||++++++++|+. ++|+|++.||++|.+++++++.++|
T Consensus 55 ~Aa~~aL~~a--~~~~Id~li~~t~s~~~~~~s~a~~v~~~Lgl~~~~~~~dv~-~aC~gg~~aL~~A~~~i~s~~~~~a 131 (379)
T TIGR01835 55 SAAKPILDRN--DKQKIDMVIFGTESGIDQSKAAAVYVHGLLGLQPFCRSFELK-QACYGATAALQMAKGHVALSPDRKV 131 (379)
T ss_pred HHHHHHHHhC--CHhhCCEEEEEeCCCCCCCCCHHHHHHHHhCCCCCceEEEec-cccHHHHHHHHHHHHHHHcCCCCeE
Confidence 9999999998 899999999987 77888899999999999998789999999 4999999999999999999999999
Q ss_pred EEEEeccccCCCccCCCccchhhhcccccCcEEEEEecCCccccccceeeeeeeeeeecCCCccceeeeeeccCCCccee
Q 014606 170 LVLSMESVSSNGYQGKVKYMQLANCLFRMGGAGILLSNKKEDRQRAKYELQHLVRTHLGSKDTAYKCVFQEHDDEGFTGV 249 (421)
Q Consensus 170 Lvv~~e~~s~~~~~~~d~~~~~~~~lfGDGAaA~lL~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~g~~~~ 249 (421)
|||++|...... .+. ...+|||||+|+||++++.- +++.. .+...+++ ..+++++.+. .
T Consensus 132 LVv~~D~a~~~~---~~~----~~~~~GdGA~A~Ll~~~~~i-----~~~~~--~~~~~t~~--~~df~~p~~~---~-- 190 (379)
T TIGR01835 132 LVIASDIAKYGL---ESP----GEPTQGAGAVAMLVSADPKL-----LAINE--DSVLYTDD--IMDFWRPNYS---T-- 190 (379)
T ss_pred EEEEeehhhccc---CCC----CCccccCccEEEEEecCCCe-----eEEec--cceeeecC--CCCccCCCCC---C--
Confidence 999999854321 111 24589999999999976421 21110 11112221 1122332210 0
Q ss_pred eeChhhhHHHHHH-HHHHHHHhhhhccchhHHHHHHHHhhhhhcCCCCCCCCCCCCCccccccEEEecCCCHHH----HH
Q 014606 250 SLSRSILQVAGEA-LKANMATLAAMVLPYSELVWYAVSVTWKKIWPPGRKRGPYIPDFRKAFEHFCVHAGGKAV----ID 324 (421)
Q Consensus 250 ~l~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~gl~~~~~~~~~~~did~~i~Hq~~~~~----~~ 324 (421)
.|.+.+.. ...++ +...+.+.+.+.++|++ ++|||+|++||++.++ ++
T Consensus 191 -----~~~v~g~~s~~~y~--------------~~~~~~~~~~l~~~g~~--------~~did~~i~H~p~~~~~~k~~~ 243 (379)
T TIGR01835 191 -----TALVDGQYSNEQYL--------------NAFENAWNDYAKRTGLS--------LADFAAFCFHVPFTKMGLKALR 243 (379)
T ss_pred -----ceeECcHHHHHHHH--------------HHHHHHHHHHHHHhCCC--------HHHcCEEEECCCCCcHHHHHHH
Confidence 01111110 01111 11112334556678888 5999999999998777 44
Q ss_pred HHHHHCCCCh-hhhH----HHHHHHhccCCCccchHHHHHHHHHHcC-CCCCCCeEEEEeecccccccceeeeeecc
Q 014606 325 AIKENLKLKD-RDVE----ASKTTLYRFGNTSSSSVWYELSYLEAKG-KVKKGDKIWQLAFGSGFKCNSAVWKCISN 395 (421)
Q Consensus 325 ~i~~~lgl~~-~~~~----~s~~~l~~~Gn~~sasi~i~L~~~~~~g-~~~~Gd~vll~~~G~G~~~~~~llr~~~~ 395 (421)
.+.+.++++. +++. .|+.+.+++|||++||+|++|.++++++ ++++||+|+|+++|+|.....+.++..+.
T Consensus 244 ~~l~~~~~~~~~~~~~~~~~s~~~~~~~GN~~sas~~l~L~~~l~~~~~~~~Gd~ill~s~GsG~~ae~~~~~~~~~ 320 (379)
T TIGR01835 244 HILKKNYEDEDESVQNAYLESIIYNREVGNLYTGSLYLGLASLLENAFEDTTGDKIGLFSYGSGAVAEFFSGTLVAG 320 (379)
T ss_pred HHHhhcccccHHHHHHHhhhhhhhhhhcCchHhHHHHHHHHHHHHhcccCCCCCEEEEEEecCCcceeeEEEEEccc
Confidence 5667788873 3332 3456789999999999999999999986 78999999999999999988888887654
No 33
>PLN02577 hydroxymethylglutaryl-CoA synthase
Probab=100.00 E-value=1.7e-37 Score=313.90 Aligned_cols=309 Identities=16% Similarity=0.172 Sum_probs=226.0
Q ss_pred CCceEEEEeeeecCCCCCccCHHHHHHHHHHcCCCChHHHHHHHHHHHHcCCCCceecCCCCCCCCCCCChHHHHHHHHH
Q 014606 8 SKRVYLVDFICYKAPESLRAPISAFIEHTERSGTFDSKAVEFQTKVLERSGVGNETCLPCGTHLLPADGSLNSSMEELKT 87 (421)
Q Consensus 8 ~~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~s~~~~~~~~~~ 87 (421)
+++++|.++|.|+|+. +|+|+|+.+.++ .++ +|+ ++||.+|+++..+ ++ |++.+
T Consensus 2 ~~~vgI~gig~Y~P~~--~v~n~eLa~~~g----~~~------~~~--~~GI~~r~~ava~-----~~-------Ed~~t 55 (459)
T PLN02577 2 PKNVGILAMEVYFPPT--CVQQEALEAHDG----VSK------GKY--TIGLGQDCMAFCT-----DV-------EDVIS 55 (459)
T ss_pred CCccEEEEEEEeCCCe--EEcHHHHHHHhC----CCH------HHH--hhccceeEeccCC-----CC-------CCHHH
Confidence 3579999999999999 999999999875 244 465 5899999974211 01 23568
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEec-cCCCCCCcHHHHHH---HHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHHc
Q 014606 88 VLFSIVQDLFSKHKINPKSIDILITNC-SVSCPTPSVAAMVI---NKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLRV 163 (421)
Q Consensus 88 la~~Aa~~aL~~ag~~~~~Id~li~~s-s~~~~~p~~a~~l~---~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~~ 163 (421)
||++||+++|+++|++|++||+||++| ++++..|+.|..|+ ++||.+ ++.+||++ .+|+|++.||++|.++|++
T Consensus 56 mA~~AA~~aL~~agid~~~IdllivaTeT~~d~~ps~A~~v~~ll~~LG~~-~~~afDi~-~AC~G~~~AL~~A~~~i~s 133 (459)
T PLN02577 56 MSLTVVKSLLEKYNIDPKQIGRLEVGSETVIDKSKSIKTFLMQLFEESGNT-DIEGVDST-NACYGGTAALLNCVNWVES 133 (459)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCchHHHHHHHHHHhCCC-CcEEeehh-hhhHHHHHHHHHHHHHHHc
Confidence 999999999999999999999999998 77888999998885 688886 79999999 5999999999999999999
Q ss_pred cC--CCeEEEEEeccccCCCccCCCccchhhhcccccCcEEEEEecCCccccccceeeeeeeeeee-cCCCccceeeeee
Q 014606 164 QK--NSLALVLSMESVSSNGYQGKVKYMQLANCLFRMGGAGILLSNKKEDRQRAKYELQHLVRTHL-GSKDTAYKCVFQE 240 (421)
Q Consensus 164 g~--~~~vLvv~~e~~s~~~~~~~d~~~~~~~~lfGDGAaA~lL~~~~~~~~~~~~~~~~~~~~~~-~t~~~~~~~~~~~ 240 (421)
+. .++||||++|..+.... + . ..++||||+|+||++++.. . +.... .+.+....++++|
T Consensus 134 g~~~~~~aLVV~aD~a~~~~~-~-~------e~t~GdGA~A~lv~~~~~~------~----l~~~~~g~~~~~~~Df~rP 195 (459)
T PLN02577 134 SSWDGRYGLVVAADSAVYAEG-P-A------RPTGGAGAVAMLVGPNAPI------V----FESKYRGSHMAHVYDFYKP 195 (459)
T ss_pred CCCCCCeEEEEEechhhccCC-C-C------CCCCCcceEEEEEccCCCc------e----eecccccccCcccchhccc
Confidence 87 59999999999765431 1 2 2367999999999975421 1 11111 1222222344444
Q ss_pred ccCCCcceeeeChhhhHHHHHHHHHHHHHhhhhccchhHHHHHHHHhhhhh----c------CCCCCCCCCCCCCccccc
Q 014606 241 HDDEGFTGVSLSRSILQVAGEALKANMATLAAMVLPYSELVWYAVSVTWKK----I------WPPGRKRGPYIPDFRKAF 310 (421)
Q Consensus 241 ~~~~g~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~----l------~~~gl~~~~~~~~~~~di 310 (421)
..... .|.+ +++.+++.+++.++++ + ...|++ .+||
T Consensus 196 ~~~~~---------~~~v-----------------dG~~s~~~yl~~~~~~~~~~~~k~~~~~~~g~~--------~~d~ 241 (459)
T PLN02577 196 DLASE---------YPVV-----------------DGKLSQTCYLMALDSCYKRFCEKYEKLEGKQFS--------ISDA 241 (459)
T ss_pred CCCCC---------ceEE-----------------cchHHHHHHHHHHHHHHHHHHHHhhcccccCCC--------HHHc
Confidence 32110 1111 1222233333333322 1 123666 4899
Q ss_pred cEEEecCCCHHHHHHHHHHCCCC----------------------------------------------hhhhHHHHHHH
Q 014606 311 EHFCVHAGGKAVIDAIKENLKLK----------------------------------------------DRDVEASKTTL 344 (421)
Q Consensus 311 d~~i~Hq~~~~~~~~i~~~lgl~----------------------------------------------~~~~~~s~~~l 344 (421)
|++++||+..+|...-.++|.+. .+|+.+|...-
T Consensus 242 d~~vfHqP~~km~~ka~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kv~ps~~~~ 321 (459)
T PLN02577 242 DYFVFHAPYNKLVQKSFARLVYNDFQRNASSVDEDAKEKLAPFAGLSSDESYQNRDLEKVSQQVAKPLYDAKVQPTTLIP 321 (459)
T ss_pred CEEEecCCccchhHHHHHHHhhhhhhhccccccchhhhccccccccchhhccccchHHHHHHHhhHHHHHHhhccHhHHH
Confidence 99999999888877765555311 14555566677
Q ss_pred hccCCCccchHHHHHHHHHHcCC-CCCCCeEEEEeecccccccceeeeeeccC
Q 014606 345 YRFGNTSSSSVWYELSYLEAKGK-VKKGDKIWQLAFGSGFKCNSAVWKCISNL 396 (421)
Q Consensus 345 ~~~Gn~~sasi~i~L~~~~~~g~-~~~Gd~vll~~~G~G~~~~~~llr~~~~~ 396 (421)
++.||++++|+++.|..++++.. ..+|++|+++++|+|.....+.+++.+.-
T Consensus 322 ~~vGN~YTaSlyl~L~SlL~~~~~~~~G~rIg~fSYGSG~~se~fs~~v~~~~ 374 (459)
T PLN02577 322 KQVGNMYTASLYAALASLVHNKHSELAGKRILMFSYGSGLTATMFSLRLHEGQ 374 (459)
T ss_pred HhcCcccchHHHHHHHHHHhhccccCCCCEEEEEeecCCccceeEEEEEeCCC
Confidence 88999999999999999997542 44899999999999999999999988753
No 34
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=100.00 E-value=3.4e-36 Score=291.33 Aligned_cols=312 Identities=16% Similarity=0.203 Sum_probs=244.1
Q ss_pred CceEEEEeeeecCCCCCccCHHHHHHHHHHcCCCChHHHHHHHHHHHHcCCCCceecCCCCCCCCCCCChHHHHHHHHHH
Q 014606 9 KRVYLVDFICYKAPESLRAPISAFIEHTERSGTFDSKAVEFQTKVLERSGVGNETCLPCGTHLLPADGSLNSSMEELKTV 88 (421)
Q Consensus 9 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~s~~~~~~~~~~l 88 (421)
+.++|.++|.|+|.. +|+.+|+.+.++ .++ +++.+.+|++++.+.+. +|++++|
T Consensus 1 ~~iGI~~~g~y~p~~--~i~~~ela~~~g----~d~------~k~~~gl~~~e~sv~~~--------------~ED~vTm 54 (377)
T COG3425 1 MMIGIVGIGAYIPRY--RIKLEELARAWG----VDP------EKIKKGLGVEEKSVPPW--------------DEDAVTM 54 (377)
T ss_pred CccccceEEEeccce--EeeHHHHHhhcC----CCh------HHhhhccccccccCCCC--------------chhHHHH
Confidence 468999999999999 999999999875 344 47777899999998653 2678999
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEec-cCCCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHHccCCC
Q 014606 89 LFSIVQDLFSKHKINPKSIDILITNC-SVSCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLRVQKNS 167 (421)
Q Consensus 89 a~~Aa~~aL~~ag~~~~~Id~li~~s-s~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~~g~~~ 167 (421)
|++||+++|+++++||++|+.|+++| |..+.....+..|++.||+.+++.++|+.+ +|.++..||+.|..++.+|+.+
T Consensus 55 aveAA~~~l~r~~~D~~~Ig~v~vgTES~~d~~K~~at~v~~~lg~~~~~~~~d~~~-AC~agT~aL~~a~~~v~s~~~~ 133 (377)
T COG3425 55 AVEAARNALKRADIDPSKIGAVIVGSESGPDAVKPTATIVAEALGLNPSARAADVEF-ACYAGTAALQAAIGWVESGMIS 133 (377)
T ss_pred HHHHHHHHHhccCCCHHHCceEEEecCCCcccccchHHHHHHHhCCCCceehhhHHH-HHHHHHHHHHHHHHHHHcCCcc
Confidence 99999999999999999999999998 778888999999999999999999999995 9999999999999999999999
Q ss_pred eEEEEEeccccCCCccCCCccchhhhcccccCcEEEEEecCCccccccceeeeeeeeeeecCCCccceeeeeeccCCCcc
Q 014606 168 LALVLSMESVSSNGYQGKVKYMQLANCLFRMGGAGILLSNKKEDRQRAKYELQHLVRTHLGSKDTAYKCVFQEHDDEGFT 247 (421)
Q Consensus 168 ~vLvv~~e~~s~~~~~~~d~~~~~~~~lfGDGAaA~lL~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~g~~ 247 (421)
++|||++|+.-... .+. ...+.|+||+|+||++++..- .++.+. .++ .+| ..++|++.+. .+.
T Consensus 134 ~~LvI~sD~a~~~~---~~~----~E~t~GAGavA~lIg~n~~~~----a~~~~~-~sy-t~d---~~DFwRp~~~-~yp 196 (377)
T COG3425 134 YGLVIGADTAQYAP---GDA----LEYTAGAGAVAFLIGKNPPIV----AEFEGT-GSY-TTD---TPDFWRPDGQ-PYP 196 (377)
T ss_pred ceEEEeehhhccCC---Ccc----cCccCCCceEEEEEccCCCeE----EEecCc-eEE-ecC---CCcccccCCC-ccc
Confidence 99999999954321 122 346899999999999974321 111110 111 122 2345555432 111
Q ss_pred --eeeeChhhhHHHHHHHHHHHHHhhhhccchhHHHHHHHHhhhhhcCCCCCCCCCCCCCccccccEEEecCCCHHHHHH
Q 014606 248 --GVSLSRSILQVAGEALKANMATLAAMVLPYSELVWYAVSVTWKKIWPPGRKRGPYIPDFRKAFEHFCVHAGGKAVIDA 325 (421)
Q Consensus 248 --~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~gl~~~~~~~~~~~did~~i~Hq~~~~~~~~ 325 (421)
+-..+ .|. ++. ....+..+..++.|++ ++|+|++++||++.++-..
T Consensus 197 ~~dg~~s--~~~--------Y~~--------------~~~~a~~~~~~k~gls--------~~dfdy~vfH~P~~k~~~k 244 (377)
T COG3425 197 YVDGRFS--EPA--------YFK--------------HVENAAKGYMEKTGLS--------PDDFDYIVFHQPNGKFPKK 244 (377)
T ss_pred ccCceec--HHH--------HHH--------------HHHHHHHHHHHHhCCC--------hhhhCeEEecCCCCchHHH
Confidence 10111 111 111 1111222334567887 4999999999999999999
Q ss_pred HHHHCCCChhhhHHHHHHHhccCCCccchHHHHHHHHHHcCCCCCCCeEEEEeecccccccceeeeeeccCC
Q 014606 326 IKENLKLKDRDVEASKTTLYRFGNTSSSSVWYELSYLEAKGKVKKGDKIWQLAFGSGFKCNSAVWKCISNLR 397 (421)
Q Consensus 326 i~~~lgl~~~~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~g~~~~Gd~vll~~~G~G~~~~~~llr~~~~~~ 397 (421)
.++.++...+++.++....++.||++++|+++.|..+++.-+ .+||+|++++||+|....++.++.++.+.
T Consensus 245 a~k~l~~~~e~v~~~l~~~~~vGN~YtgS~~L~Las~L~~a~-~~G~rIl~~SYGSGa~s~~fs~~v~~~~~ 315 (377)
T COG3425 245 AAKSLGFKEEQVKPGLVYPQRIGNTYTGSLLLGLASLLDNAK-LPGDRILLFSYGSGAGSEAFSITVTDGIE 315 (377)
T ss_pred HHHHhCccHhhcCccchhhhhcCcccchhHHHHHHHHHhhcC-CCCCEEEEEeeCCCcceeEEEEEecccHH
Confidence 999999999999988777778999999999999999999655 69999999999999888888888877543
No 35
>TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade. Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes.
Probab=100.00 E-value=2e-34 Score=291.32 Aligned_cols=315 Identities=15% Similarity=0.185 Sum_probs=220.8
Q ss_pred ceEEEEeeeecCCCCCccCHHHHHHHHHHcCCCChHHHHHHHHHHHHcCCCCcee--cCCCCCCCCCCCChHHHHHHHHH
Q 014606 10 RVYLVDFICYKAPESLRAPISAFIEHTERSGTFDSKAVEFQTKVLERSGVGNETC--LPCGTHLLPADGSLNSSMEELKT 87 (421)
Q Consensus 10 ~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~--~~~~~~~~~~~~s~~~~~~~~~~ 87 (421)
+|+|.++|.|+|+. +|+|+|+.+..+ .++ .|+ .+||.+|++ +.++ |++.+
T Consensus 1 ~vgI~~ig~y~P~~--~v~~~eLa~~~g----~~~------~k~--~~GI~~rr~av~~~~--------------Ed~~t 52 (454)
T TIGR01833 1 DVGILALEIYFPSQ--YVDQAELEKYDG----VSA------GKY--TIGLGQTKMGFCTDR--------------EDINS 52 (454)
T ss_pred CcEEEEEEEeCCCe--EEcHHHHHHhcC----CCH------HHh--eechhheecccCCCC--------------CCHHH
Confidence 58999999999999 999999998764 233 354 599999995 3332 23568
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEec-cCCCCCCcHHHHHHHHc---CCCCCceeeeeeCCcchHHHHHHHHHHHHHHc
Q 014606 88 VLFSIVQDLFSKHKINPKSIDILITNC-SVSCPTPSVAAMVINKF---GLKSNVRSFHLSGMGCSAGILSISLAKDLLRV 163 (421)
Q Consensus 88 la~~Aa~~aL~~ag~~~~~Id~li~~s-s~~~~~p~~a~~l~~~L---Gl~~~~~~~~i~~~~C~g~~~al~~A~~li~~ 163 (421)
|+++||+++|++++++|++||+||++| ++++..|+.+..|++.| |.+ ++.+||+.+ +|+|++.||.+|.+++++
T Consensus 53 ma~~AA~~lL~~a~id~~~Id~Liv~TeS~~d~sps~a~~v~~lL~~lG~~-~~~~fDi~~-AC~G~t~AL~~A~~~i~s 130 (454)
T TIGR01833 53 LCLTVVSKLMERYNIDYNQIGRLEVGTETIIDKSKSVKTVLMQLFEESGNT-DVEGIDTTN-ACYGGTAALFNAINWIES 130 (454)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCchHHHHHHHHHhcCCC-CceEEeccc-cchhHHHHHHHHHHHHHc
Confidence 999999999999999999999999998 88999999999999855 555 899999994 999999999999999999
Q ss_pred cC--CCeEEEEEeccccCCCccCCCccchhhhcccccCcEEEEEecCCccccccceeeeeeeeeeecCCCccceeeeeec
Q 014606 164 QK--NSLALVLSMESVSSNGYQGKVKYMQLANCLFRMGGAGILLSNKKEDRQRAKYELQHLVRTHLGSKDTAYKCVFQEH 241 (421)
Q Consensus 164 g~--~~~vLvv~~e~~s~~~~~~~d~~~~~~~~lfGDGAaA~lL~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~ 241 (421)
+. .++||||++|+... .+.. ...++||||+|+||++++.- .++. ++..++... .-++++|.
T Consensus 131 ~~~~~~~aLVV~sDia~y-----~~~~---~~~t~GaGAvAmLv~~~~~~----~~~~-~~~~~~~~~----~~DF~rP~ 193 (454)
T TIGR01833 131 SSWDGRYALVVAGDIAVY-----AKGN---ARPTGGAGAVAMLIGPNAPI----VFER-GLRGSHMQH----AYDFYKPD 193 (454)
T ss_pred CCcCCCeEEEEEeccccc-----cCCC---eeeccccceEEEEeccCccc----eecC-ccceEEEee----cccccCCC
Confidence 86 59999999999322 1222 24578999999999977641 0111 111122211 12344432
Q ss_pred cCCCcceeeeChhhhHHHHH-HHHHHHHHhhhhccchhHHHHHHHHhhhhhcCCC----CCCCCCCCCCccccccEEEec
Q 014606 242 DDEGFTGVSLSRSILQVAGE-ALKANMATLAAMVLPYSELVWYAVSVTWKKIWPP----GRKRGPYIPDFRKAFEHFCVH 316 (421)
Q Consensus 242 ~~~g~~~~~l~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~----gl~~~~~~~~~~~did~~i~H 316 (421)
... +.|.+.+. ....+++.+ .+.|....+.+.+++.+. |+. .+|+|++++|
T Consensus 194 ~~~---------~~p~vdg~~S~~~Yl~a~-------~~~y~~y~~~~~~a~~~~~~~~~~~--------~~dfd~~~fH 249 (454)
T TIGR01833 194 LAS---------EYPVVDGKLSIQCYLSAL-------DRCYKSYCKKIEKQWGKSGGDRKFT--------LNDFDYMVFH 249 (454)
T ss_pred CCC---------cccccCCccCHHHHHHHH-------HHHHHHHHHHHHHhhhhhccccCCC--------HhHcCEEecc
Confidence 110 01111110 001122211 122222222333333322 444 5899999999
Q ss_pred CCCHHHHHHH-HHHC---------------------------------------------CCChhhhHHHHHHHhccCCC
Q 014606 317 AGGKAVIDAI-KENL---------------------------------------------KLKDRDVEASKTTLYRFGNT 350 (421)
Q Consensus 317 q~~~~~~~~i-~~~l---------------------------------------------gl~~~~~~~s~~~l~~~Gn~ 350 (421)
++..+|...- ++.+ +...+|+.+|...-++.||+
T Consensus 250 ~P~~km~~ka~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kv~ps~~~~~~vGN~ 329 (454)
T TIGR01833 250 SPYCKLVQKSLARLLYNDFLRNPSSIDTALYEGLEALSTLKLEDTYFDRDLEKAFMKASKELFDKKTKPSLLVPNQVGNM 329 (454)
T ss_pred CCcccHHHHHHHHHHHhhhhhccccccchhhcccchhhccccccccchhhHHHHHHhhhhhhHHHhhcchhHHHHhcCch
Confidence 9987776664 2221 11125666666666789999
Q ss_pred ccchHHHHHHHHHHcCC--CCCCCeEEEEeecccccccceeeeeecc
Q 014606 351 SSSSVWYELSYLEAKGK--VKKGDKIWQLAFGSGFKCNSAVWKCISN 395 (421)
Q Consensus 351 ~sasi~i~L~~~~~~g~--~~~Gd~vll~~~G~G~~~~~~llr~~~~ 395 (421)
+++|+++.|..+++..+ ...|++|+++++|+|.....+.+++.+.
T Consensus 330 YtaSlyl~L~Sll~~~~~~~~~g~ri~~fSYGSG~~se~fs~~v~~~ 376 (454)
T TIGR01833 330 YTASLYGCLASLLSSKSAQELAGKRVGMFSYGSGLAASMFSLRVSQD 376 (454)
T ss_pred hhhHHHHHHHHHHhhCCccccCCCEEEEEeccCCcceeeEEEEEeCC
Confidence 99999999999997543 4579999999999999999999999875
No 36
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....
Probab=100.00 E-value=1.9e-32 Score=251.70 Aligned_cols=201 Identities=21% Similarity=0.265 Sum_probs=161.0
Q ss_pred CCCceEEEEeeeecCCCCCccCHHHHHHHHHHcCCCCh--HHHHHHHHHHHHcCCCCceecCC-CCCCC------CCCC-
Q 014606 7 PSKRVYLVDFICYKAPESLRAPISAFIEHTERSGTFDS--KAVEFQTKVLERSGVGNETCLPC-GTHLL------PADG- 76 (421)
Q Consensus 7 ~~~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~--~~~~~~~~i~~~~GI~~R~~~~~-~~~~~------~~~~- 76 (421)
...+.+|.+||+.+|++ +++|+|+.+.+.+....+. +..+++++|++++||++||++-+ ++... ....
T Consensus 11 ~~g~A~Il~IgTA~P~~--~~~Q~~~~e~~~~~~~~~~~~~~~~~l~ri~~~sgI~~R~~vl~~~~~~~~p~~~~~~~ps 88 (226)
T PF00195_consen 11 SPGPAYILSIGTAVPPH--RITQEEIAEFFFRITHSDDLPDLRRKLRRIFENSGIEKRHSVLPEEWLDEYPSFWDFADPS 88 (226)
T ss_dssp -SSSEEEEEEEEE-SSE--EEEGCCHHHHHHHHTT-TTGHHHHHHHHHHHHHST-SEEEESS-HHHHHTSGGGHSSSSS-
T ss_pred CCCCeEEEEEEEeCCCc--eecHHHHHHHHHHHhcccchhHHHHHHHhhhhccccceeccccchhhhhcCcchhhccCcc
Confidence 45679999999999999 9999999987644322232 34567899999999999998643 22111 1112
Q ss_pred ---ChHHHHHHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHH
Q 014606 77 ---SLNSSMEELKTVLFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILS 153 (421)
Q Consensus 77 ---s~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~a 153 (421)
.+..|.+++.+|+.+|+++||+++|++++|||+||++|++++..|++..+|.++|||++++..+.|.++||+|++.+
T Consensus 89 ~~~R~~~~~~~a~~L~~~Aa~~AL~~~g~~~~dIthlv~vs~TG~~~PglD~~l~~~LgL~~~v~R~~i~~~GC~gg~~~ 168 (226)
T PF00195_consen 89 LAERNALYAEEAPPLAEEAARKALAEAGLDPSDITHLVTVSCTGIAAPGLDARLINRLGLRPDVQRTPIFGMGCAGGAAG 168 (226)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTS-GGGECEEEEEESSSSECS-HHHHHHHHHT--TTSEEEEEES-GGGHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcccceEEEEecCCcCCCchhHHHHhcCCCCCCcEEEEEeccchhhHHHH
Confidence 25568899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHccCCCeEEEEEeccccCCCccC--CCccchhhhcccccCcEEEEEecCC
Q 014606 154 ISLAKDLLRVQKNSLALVLSMESVSSNGYQG--KVKYMQLANCLFRMGGAGILLSNKK 209 (421)
Q Consensus 154 l~~A~~li~~g~~~~vLvv~~e~~s~~~~~~--~d~~~~~~~~lfGDGAaA~lL~~~~ 209 (421)
|..|..+.++++..+||||++|.+|.+++.+ .++++++...+|||||+|+||+.+|
T Consensus 169 L~~A~~~~~~~p~a~VLvv~vElcsl~~~~~~~~~~~~lv~~aLFgDGaAA~vv~~dP 226 (226)
T PF00195_consen 169 LRRAKDIARANPGARVLVVCVELCSLHFQAPNDDSLDNLVANALFGDGAAAVVVGADP 226 (226)
T ss_dssp HHHHHHHHHHSTT-EEEEEEEEEGGGTHHHCCTTSHHHHHHHHHB-EEEEEEEEESS-
T ss_pred HHHHHHHHhCCccceEEEEEEEeeEEEEecCCcccHHHHhHHhhhcCCceEEEEccCC
Confidence 9999999999999999999999999887543 3456788999999999999998764
No 37
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=99.96 E-value=1.4e-28 Score=233.59 Aligned_cols=235 Identities=17% Similarity=0.175 Sum_probs=184.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEec-cCCCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHHc
Q 014606 85 LKTVLFSIVQDLFSKHKINPKSIDILITNC-SVSCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLRV 163 (421)
Q Consensus 85 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s-s~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~~ 163 (421)
..+|+.+|++++|+++|++++|||.||+++ ++++..|+.+.+|+..+|++ +.++++++ .+|++++.||..|..+|++
T Consensus 7 ~~~l~~~A~~~al~~ag~~~~~i~~li~~~~~~~~~~~~~a~~i~~~lg~~-~~~~~~i~-~~C~s~~~al~~A~~~i~~ 84 (254)
T cd00327 7 ASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGIS-GGPAYSVN-QACATGLTALALAVQQVQN 84 (254)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCceEEEEEECCCCccccHHHHHHHHHhCCC-CCCcceec-cHhHHHHHHHHHHHHHHHC
Confidence 468999999999999999999999999987 56766899999999999997 79999999 5999999999999999999
Q ss_pred cCCCeEEEEEeccccCCCccCCCccchhhhcccccCcEEEEEecCCcccc---ccceeeeeeeeeeecCCCccceeeeee
Q 014606 164 QKNSLALVLSMESVSSNGYQGKVKYMQLANCLFRMGGAGILLSNKKEDRQ---RAKYELQHLVRTHLGSKDTAYKCVFQE 240 (421)
Q Consensus 164 g~~~~vLvv~~e~~s~~~~~~~d~~~~~~~~lfGDGAaA~lL~~~~~~~~---~~~~~~~~~~~~~~~t~~~~~~~~~~~ 240 (421)
|..++|||+++|. .+|||||+|+||++.+.... .+..++.+ .....++..+
T Consensus 85 g~~~~~lv~~~e~-----------------~~~gdGAaa~vL~~~~~a~~~~~~~~~~i~~---~~~~~~~~~~------ 138 (254)
T cd00327 85 GKADIVLAGGSEE-----------------FVFGDGAAAAVVESEEHALRRGAHPQAEIVS---TAATFDGASM------ 138 (254)
T ss_pred CCCCEEEEEecce-----------------eeecceEEEEEECcHHHHHHCCCceEEEEEE---EEEcCCCCCC------
Confidence 9999999999997 37999999999998653210 01112111 1111111000
Q ss_pred ccCCCcceeeeChhhhHHHHHHHHHHHHHhhhhccchhHHHHHHHHhhhhhcCCCCCCCCCCCCCccccccEEEecCCCH
Q 014606 241 HDDEGFTGVSLSRSILQVAGEALKANMATLAAMVLPYSELVWYAVSVTWKKIWPPGRKRGPYIPDFRKAFEHFCVHAGGK 320 (421)
Q Consensus 241 ~~~~g~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~gl~~~~~~~~~~~did~~i~Hq~~~ 320 (421)
.+... + +...+.+.+.++++|++ ++|||+|++||.+.
T Consensus 139 -------~~~~~---~-------------------------~~~~~~i~~~l~~ag~~--------~~did~~~~h~~~~ 175 (254)
T cd00327 139 -------VPAVS---G-------------------------EGLARAARKALEGAGLT--------PSDIDYVEAHGTGT 175 (254)
T ss_pred -------CCCCC---h-------------------------HHHHHHHHHHHHHcCCC--------HHHCCEEEccCCcC
Confidence 00000 0 01112344566778888 49999999999999
Q ss_pred HHHHHHHHHCCCChhhhH--HHHHHHhccCCCccchHHHHHHHHHHcCCCC-------CCCeEEEEeecccccccceee
Q 014606 321 AVIDAIKENLKLKDRDVE--ASKTTLYRFGNTSSSSVWYELSYLEAKGKVK-------KGDKIWQLAFGSGFKCNSAVW 390 (421)
Q Consensus 321 ~~~~~i~~~lgl~~~~~~--~s~~~l~~~Gn~~sasi~i~L~~~~~~g~~~-------~Gd~vll~~~G~G~~~~~~ll 390 (421)
.+++.+.+.++++.++.. +...+..++||+++||.++.|.++++..+.+ +|++++++++|.|++++++++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~as~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~g~Gg~~~~~~l 254 (254)
T cd00327 176 PIGDAVELALGLDPDGVRSPAVSATLIMTGHPLGAAGLAILDELLLMLEHEFIPPTPREPRTVLLLGFGLGGTNAAVVL 254 (254)
T ss_pred ccccHHHHHHHHHHhCCCCCceeccccccccchHHHHHHHHHHHHHHHhCCCcCCCCCCcCEEEEeeEcCCCcceEEEC
Confidence 999999999999877662 1236778999999999999999998765554 899999999999999999875
No 38
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=99.94 E-value=1.4e-26 Score=228.63 Aligned_cols=252 Identities=14% Similarity=0.122 Sum_probs=183.3
Q ss_pred HHHHHHHHHHHHHHhCCCC----CCCccEEEEecc-CCCC---------------------CCcHHHHHHHHcCCCCCce
Q 014606 85 LKTVLFSIVQDLFSKHKIN----PKSIDILITNCS-VSCP---------------------TPSVAAMVINKFGLKSNVR 138 (421)
Q Consensus 85 ~~~la~~Aa~~aL~~ag~~----~~~Id~li~~ss-~~~~---------------------~p~~a~~l~~~LGl~~~~~ 138 (421)
..+|+++|+++||+++|++ +++||.||++++ +++. .|+.+.+|+..||++ .+
T Consensus 11 ~~~l~~~aa~~aL~~Ag~~~~~~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~--g~ 88 (332)
T cd00825 11 VSILGFEAAERAIADAGLSREYQKNPIVGVVVGTGGGSPRFQVFGADAMRAVGPYVVTKAMFPGASGQIATPLGIH--GP 88 (332)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCEEEEEEeCCccHHHHhhhhccccccCcchhhcccchHHHHHHHHHhCCC--CC
Confidence 3479999999999999999 999999999763 3332 688899999999994 78
Q ss_pred eeeeeCCcchHHHHHHHHHHHHHHccCCCeEEEEEeccccCCCcc----------C----CCccchhhhcccccCcEEEE
Q 014606 139 SFHLSGMGCSAGILSISLAKDLLRVQKNSLALVLSMESVSSNGYQ----------G----KVKYMQLANCLFRMGGAGIL 204 (421)
Q Consensus 139 ~~~i~~~~C~g~~~al~~A~~li~~g~~~~vLvv~~e~~s~~~~~----------~----~d~~~~~~~~lfGDGAaA~l 204 (421)
+++++ .+|+|++.||+.|..+|++|..+++||+++|..+..+.. . ...+......+|||||+|+|
T Consensus 89 ~~~v~-~~cas~~~al~~A~~~i~~g~~~~~Lv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gdGaaA~v 167 (332)
T cd00825 89 AYDVS-AACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAPMDCEFDAMGALSTPEKASRTFDAAADGFVFGDGAGALV 167 (332)
T ss_pred ccccc-cHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHhhccccCCCCCCCCCCCCCCCEEEEeeEEEEE
Confidence 99999 599999999999999999999999999999987653211 0 00011125779999999999
Q ss_pred EecCCcccc---ccceeeeeeeeeeecCCCccceeeeeeccCCCcceeeeChhhhHHHHHHHHHHHHHhhhhccchhHHH
Q 014606 205 LSNKKEDRQ---RAKYELQHLVRTHLGSKDTAYKCVFQEHDDEGFTGVSLSRSILQVAGEALKANMATLAAMVLPYSELV 281 (421)
Q Consensus 205 L~~~~~~~~---~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (421)
|++.+.... ....++ .......++... . .+ . +. .
T Consensus 168 L~~~~~a~~~~~~~~~~i---~~~~~~~~~~~~----------~--~~--~---~~--~--------------------- 204 (332)
T cd00825 168 VEELEHALARGAHIYAEI---VGTAATIDGAGM----------G--AF--A---PS--A--------------------- 204 (332)
T ss_pred ECcHHHHHHCCCeEEEEE---EEEEEccCCCCC----------C--CC--C---cC--H---------------------
Confidence 998654210 001111 111111111100 0 00 0 00 0
Q ss_pred HHHHHhhhhhcCCCCCCCCCCCCCccccccEEEecCCCHHHHHHHHHHCCCChhhh--HHHHHHHhccCCCccchHHHHH
Q 014606 282 WYAVSVTWKKIWPPGRKRGPYIPDFRKAFEHFCVHAGGKAVIDAIKENLKLKDRDV--EASKTTLYRFGNTSSSSVWYEL 359 (421)
Q Consensus 282 ~~~~~~i~~~l~~~gl~~~~~~~~~~~did~~i~Hq~~~~~~~~i~~~lgl~~~~~--~~s~~~l~~~Gn~~sasi~i~L 359 (421)
....+.+.++|+++|++ ++|||++++||.+..+.+.+.++++++..+. .....+..+|||+++|+.++.|
T Consensus 205 ~~~~~~i~~al~~agl~--------~~did~~~~h~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~G~~~aas~~~~l 276 (332)
T cd00825 205 EGLARAAKEALAVAGLT--------VWDIDYLVAHGTGTPIGDVKELKLLRSEFGDKSPAVSATKAMTGNLSSAAVVLAV 276 (332)
T ss_pred HHHHHHHHHHHHHcCCC--------HhHCCEEEccCCCCCCCCHHHHHHHHHHhCCCCceeECCCcccccchhHhHHHHH
Confidence 00112344567778998 4999999999999999999998888776541 0114677899999999999999
Q ss_pred HHHHHcCCCC-------------------------CCCeEEEEeecccccccceee
Q 014606 360 SYLEAKGKVK-------------------------KGDKIWQLAFGSGFKCNSAVW 390 (421)
Q Consensus 360 ~~~~~~g~~~-------------------------~Gd~vll~~~G~G~~~~~~ll 390 (421)
.++++..+.+ +|++++++++|.|.++++++|
T Consensus 277 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~G~Gg~~~~~vl 332 (332)
T cd00825 277 DEAVLMLEHGFIPPSIHIEELDEAGLNIVTETTPRELRTALLNGFGLGGTNATLVL 332 (332)
T ss_pred HHHHHHHhcCccCCCCCCCCCCcccCcccCCCCCCCCCEEEEeeecCCCeeEEEeC
Confidence 9998755544 789999999999999999885
No 39
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2.3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....
Probab=99.86 E-value=3.8e-22 Score=159.53 Aligned_cols=89 Identities=28% Similarity=0.508 Sum_probs=77.5
Q ss_pred CCCCCCCCCCCCCccccccEEEecCCCHHHHHHHHHHCCCChhhhHHHHHHHhccCCCccchHHHHHHHHHHcCCCCCCC
Q 014606 293 WPPGRKRGPYIPDFRKAFEHFCVHAGGKAVIDAIKENLKLKDRDVEASKTTLYRFGNTSSSSVWYELSYLEAKGKVKKGD 372 (421)
Q Consensus 293 ~~~gl~~~~~~~~~~~did~~i~Hq~~~~~~~~i~~~lgl~~~~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~g~~~~Gd 372 (421)
+++|++ ++|||++++||.|.++++.+++.+|++++++. .++++|||+++||+|++|++++++|++++||
T Consensus 2 ~~~g~~--------~~did~~i~hq~~~~~~~~~~~~lgi~~~~~~---~~~~~~Gn~~sa~~~~~L~~~~~~g~~~~Gd 70 (90)
T PF08541_consen 2 ERAGLS--------PDDIDHFIPHQASKKILDSIAKRLGIPPERFP---DNLAEYGNTGSASIPINLADALEEGRIKPGD 70 (90)
T ss_dssp HHTT----------GGGESEEEE-SSSHHHHHHHHHHHTS-GGGBE----THHHH-B-GGGHHHHHHHHHHHTTSSCTTE
T ss_pred ccccCC--------HHHCCEEEeCCCCHHHHHHHHHHcCCcHHHHH---HHHhccCcchhhhHHHHHHHHHHcCCCCCCC
Confidence 356887 59999999999999999999999999999995 7889999999999999999999999999999
Q ss_pred eEEEEeecccccccceeeee
Q 014606 373 KIWQLAFGSGFKCNSAVWKC 392 (421)
Q Consensus 373 ~vll~~~G~G~~~~~~llr~ 392 (421)
+|+++++|+|++|+++++||
T Consensus 71 ~vl~~~~G~G~~~~~~~~~~ 90 (90)
T PF08541_consen 71 RVLLVGFGAGFSWGAAVLRW 90 (90)
T ss_dssp EEEEEEEETTTEEEEEEEE-
T ss_pred EEEEEEEEhhheeEEEEEEC
Confidence 99999999999999999998
No 40
>PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the N-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1X9E_B 2HDB_B 2WYA_C 2P8U_A 3V4X_A 3V4N_C 3LEH_A 1TXT_D 1TVZ_A 2FA0_A ....
Probab=99.83 E-value=2.3e-20 Score=163.70 Aligned_cols=168 Identities=18% Similarity=0.209 Sum_probs=127.3
Q ss_pred CCCceEEEEeeeecCCCCCccCHHHHHHHHHHcCCCChHHHHHHHHHHHHcCCCCceecCCCCCCCCCCCChHHHHHHHH
Q 014606 7 PSKRVYLVDFICYKAPESLRAPISAFIEHTERSGTFDSKAVEFQTKVLERSGVGNETCLPCGTHLLPADGSLNSSMEELK 86 (421)
Q Consensus 7 ~~~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~s~~~~~~~~~ 86 (421)
++++|+|.+++.|+|.. .++.+|+.+..+ .++ .|+...+|.++..+.++. |+++
T Consensus 1 ~p~~VGI~~i~~y~p~~--~v~~~~La~~~g----~d~------~K~~~glgq~~~av~~~~--------------ED~v 54 (174)
T PF01154_consen 1 RPQNVGIDAIEFYIPRY--YVDQEELAEARG----VDP------GKYTIGLGQEKMAVPPPD--------------EDIV 54 (174)
T ss_dssp --SSEEEEEEEEE-ESE--EEEHHHHHHHTT----S-T------CHHHTTT--SEEEE--TT--------------S-HH
T ss_pred CCccccEeEEEEecCce--EecHHHHHHHhC----CCH------HHhhhhcCeeEEEeCCCc--------------ccHH
Confidence 46789999999999999 999999998765 333 255545666667776542 4678
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEec-cCCCCCCcHHHHHHHHcCC--CCCceeeeeeCCcchHHHHHHHHHHHHHHc
Q 014606 87 TVLFSIVQDLFSKHKINPKSIDILITNC-SVSCPTPSVAAMVINKFGL--KSNVRSFHLSGMGCSAGILSISLAKDLLRV 163 (421)
Q Consensus 87 ~la~~Aa~~aL~~ag~~~~~Id~li~~s-s~~~~~p~~a~~l~~~LGl--~~~~~~~~i~~~~C~g~~~al~~A~~li~~ 163 (421)
+||+.|++++|++.++++++|+.|+++| |.-+...+.+.+|++.||+ .+++..+|+.+ +|.|+..||+.|..++++
T Consensus 55 TmA~nAa~~ll~~~~id~~~Ig~l~vgTES~vD~sKs~~t~v~~ll~~s~~~~~~~~e~k~-ACygGTaAL~~a~~~v~s 133 (174)
T PF01154_consen 55 TMAANAAKPLLDRYNIDPDDIGRLIVGTESGVDKSKSISTYVHQLLGLSGNPDCRGVEMKQ-ACYGGTAALQNAVNWVAS 133 (174)
T ss_dssp HHHHHHHHTTHHHHT-HHHHEEEEEEE-SS-SBSSS-HHHHHHHHTTTTT-SSSEEEEEES-GGGHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHHcCCCHHHccEEEEeccccccccccHHHHHHHHhCcCCCCceeeeehhh-hhHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999998 7666677899999999999 45688999995 999999999999999999
Q ss_pred cC--CCeEEEEEeccccCCCccCCCccchhhhcccccCcEEEEEecCC
Q 014606 164 QK--NSLALVLSMESVSSNGYQGKVKYMQLANCLFRMGGAGILLSNKK 209 (421)
Q Consensus 164 g~--~~~vLvv~~e~~s~~~~~~~d~~~~~~~~lfGDGAaA~lL~~~~ 209 (421)
+. .+++|||++|...... .+ ...+-|-||+|+||+++.
T Consensus 134 ~~~~g~~aLVVasDiA~y~~---g~-----~e~TqGAGAVAmLi~~na 173 (174)
T PF01154_consen 134 SPWDGRKALVVASDIARYDL---GS-----AEPTQGAGAVAMLIGPNA 173 (174)
T ss_dssp TTSTTEEEEEEEEEEE--ST---TT-----TGGG-EEEEEEEEEECS-
T ss_pred CCCCCCeEEEEeccccccCC---CC-----ccccccceeEEEEecCCC
Confidence 85 5799999999953221 11 235789999999999864
No 41
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=99.82 E-value=4.5e-19 Score=176.25 Aligned_cols=310 Identities=11% Similarity=0.045 Sum_probs=202.7
Q ss_pred CceEEEEeeeecCCCCCccCHHHHHHHHHHcCCCChHHHHH-----HHHHHHHcCCCCceecCCCCCCCCCCCChHHHHH
Q 014606 9 KRVYLVDFICYKAPESLRAPISAFIEHTERSGTFDSKAVEF-----QTKVLERSGVGNETCLPCGTHLLPADGSLNSSME 83 (421)
Q Consensus 9 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~-----~~~i~~~~GI~~R~~~~~~~~~~~~~~s~~~~~~ 83 (421)
.+++|.++|..-|=- .+.++..+.+.. +.-+.+...+ -++|..++|+.+|++.. .+
T Consensus 3 ~~v~I~~~g~vs~lG---~~~~~~~aa~ra-gi~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---------------~~ 63 (348)
T PRK06147 3 RALAIVGSGMVTAVG---LDAPSSCAAIRA-RLDNFQETRFIDPPGGEWLIGAPVPLPPPWRG---------------PE 63 (348)
T ss_pred CceEEEecceeecCc---CCHHHHHHHHHc-ccccccccccccCCCCCceEeecCcCCcccCc---------------hH
Confidence 469999999999976 566666665521 1001000000 03455556666666521 12
Q ss_pred HHHHHHHHHHHHHHHhCC-CCCCCccEEEEecc------CCCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHH
Q 014606 84 ELKTVLFSIVQDLFSKHK-INPKSIDILITNCS------VSCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISL 156 (421)
Q Consensus 84 ~~~~la~~Aa~~aL~~ag-~~~~~Id~li~~ss------~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~ 156 (421)
...+|+.+|++++|++++ +++++||++|..++ ++...+..+..++++||+..+.++++|+ .+|++++.||..
T Consensus 64 r~~~La~~Al~~aL~~a~~~~~~~i~lil~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~~~~~~~i~-~~casg~~Al~~ 142 (348)
T PRK06147 64 RLAEMAAPAIAEALEGLPALDASEAPLLLCVAEEERPGRPPDLEERLLRELEARLGLRLEPGSAVIA-RGRVSGAVALAQ 142 (348)
T ss_pred HHHHHHHHHHHHHHHhcccccccCCcEEEEeCchhcCCCCcchHHHHHHHHHHHhCCCCCCCccccc-ccchHHHHHHHH
Confidence 356899999999999999 79999999887543 2334556788999999996557889999 599999999999
Q ss_pred HHHHHHccCCCeEEEEEeccccCC--Cc--------cCCCccchhhhcccccCcEEEEEecCCccccccceeeeeeeeee
Q 014606 157 AKDLLRVQKNSLALVLSMESVSSN--GY--------QGKVKYMQLANCLFRMGGAGILLSNKKEDRQRAKYELQHLVRTH 226 (421)
Q Consensus 157 A~~li~~g~~~~vLvv~~e~~s~~--~~--------~~~d~~~~~~~~lfGDGAaA~lL~~~~~~~~~~~~~~~~~~~~~ 226 (421)
|..+|++|..+.+||+++|.++.. +. ...++. ..++|||||+++||++.+.... .+.++.+ .-
T Consensus 143 A~~~i~~G~~~~~lvgg~d~~~~~~~~~~~~~~~~l~~~~~~---~G~v~GEGA~a~vLe~~~~A~~-rga~i~a---~g 215 (348)
T PRK06147 143 ARRLIAAGGCPRVLVAGVDSLLTGPTLAHYEARDRLLTSQNS---NGFIPGEAAAAVLLGRPAGGEA-PGLPLLG---LG 215 (348)
T ss_pred HHHHHHcCCCCEEEEEeeccccCHHHHHHHHHhhccCCCCCC---CceeeeceEEEEEEccHhhhhc-CCCceEE---EE
Confidence 999999999999999999987652 10 001222 4789999999999998654211 1122211 10
Q ss_pred ecCCCccceeeeeeccCCCcceeeeChhhhHHHHHHHHHHHHHhhhhccchhHHHHHHHHhhhhhcCCCCCCCCCCCCCc
Q 014606 227 LGSKDTAYKCVFQEHDDEGFTGVSLSRSILQVAGEALKANMATLAAMVLPYSELVWYAVSVTWKKIWPPGRKRGPYIPDF 306 (421)
Q Consensus 227 ~~t~~~~~~~~~~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~gl~~~~~~~~~ 306 (421)
+..+...+ ......|. .++. ..+.|.++|.++|+++
T Consensus 216 ~~~~~~~~---------------~~~~~~p~-~g~g---------------------l~~ai~~AL~~agl~~------- 251 (348)
T PRK06147 216 LGREPAPV---------------GESEDLPL-RGDG---------------------LTQAIRAALAEAGCGL------- 251 (348)
T ss_pred EeecCCCc---------------ccCCCCCC-ChHH---------------------HHHHHHHHHHHcCCCH-------
Confidence 11111000 00000010 0000 1133446677889984
Q ss_pred cccccEEEecCCCHHHHH-----HHHHHCCCChh--hhHHHHHHHhccCCCccchHHHHHHHHH---HcCCCCCCCeEEE
Q 014606 307 RKAFEHFCVHAGGKAVID-----AIKENLKLKDR--DVEASKTTLYRFGNTSSSSVWYELSYLE---AKGKVKKGDKIWQ 376 (421)
Q Consensus 307 ~~did~~i~Hq~~~~~~~-----~i~~~lgl~~~--~~~~s~~~l~~~Gn~~sasi~i~L~~~~---~~g~~~~Gd~vll 376 (421)
+|||+++.|-.+....+ .+.+.++-..+ .+ +..-..+||+++|+-++.+..++ ++| .-+|+++|+
T Consensus 252 -~dId~v~ah~~gt~~~d~~e~~A~~~~f~~~~~~~~~---~~~k~~~Gh~~aAaG~~~~~~a~~~~~~g-~~~g~~~L~ 326 (348)
T PRK06147 252 -EDMDYRIADLNGEQYRFKEAALAEMRLFRVRKEFFDL---WHPAECIGEIGAAIGPALLGVALAASRKG-YGPGPNVLC 326 (348)
T ss_pred -HHCCEEEcCCCCCccchHHHHHHHHHHhhhccCCCce---ecchHhhcchHHHHHHHHHHHHHHHHHcC-cCCCCcEEE
Confidence 99999999987654432 23444553222 23 34567799999999998888644 444 457999999
Q ss_pred Eeecccccccceeeeeec
Q 014606 377 LAFGSGFKCNSAVWKCIS 394 (421)
Q Consensus 377 ~~~G~G~~~~~~llr~~~ 394 (421)
++..-...-++++++.++
T Consensus 327 ~s~~d~g~r~a~~l~~~~ 344 (348)
T PRK06147 327 HLSDDDGARAALVLEYRR 344 (348)
T ss_pred EecCCCCceEEEEEeccc
Confidence 999988888999999654
No 42
>TIGR02845 spore_V_AD stage V sporulation protein AD. Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.
Probab=99.81 E-value=1.3e-18 Score=166.62 Aligned_cols=230 Identities=13% Similarity=0.165 Sum_probs=155.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHHcc
Q 014606 85 LKTVLFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLRVQ 164 (421)
Q Consensus 85 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~~g 164 (421)
..+|+.+|+++||+++|++++|||++|+++..++ +..+..+++.||+ +.+++++ +|++++.||.+|..+|++|
T Consensus 50 e~eLa~eAa~~ALekAGL~~~DID~IIvGdl~~Q--~~~As~vA~~LGI----P~fdV~~-ACSTf~~AL~lAa~lI~SG 122 (327)
T TIGR02845 50 ERKLMEDAVNLALKKANLKKDDVDFFLAGDLLNQ--IITANFVARDLGI----PFLGLYG-ACSTSMETLALGAMLVDGG 122 (327)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEeCCCCc--ccHHHHHHHHhCC----CEEEEec-cCHHHHHHHHHHHHHHhCC
Confidence 4579999999999999999999999998875443 4568899999997 3599995 9999999999999999999
Q ss_pred CCCeEEEEEeccccC------CCccC--CCccchhhhcccccCcEEEEEecCCccccccceeeeeeeeeeecCCCcccee
Q 014606 165 KNSLALVLSMESVSS------NGYQG--KVKYMQLANCLFRMGGAGILLSNKKEDRQRAKYELQHLVRTHLGSKDTAYKC 236 (421)
Q Consensus 165 ~~~~vLvv~~e~~s~------~~~~~--~d~~~~~~~~lfGDGAaA~lL~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~ 236 (421)
..++|||+++|..+. ...++ ++|. ++.+|||||+|+||++.+... ++.++ |-|+-.+
T Consensus 123 ~ad~VLVV~Ssh~S~AErqfr~p~eyg~q~~~---ta~~tgdGAGA~vl~~~~~~~-----~i~~~------t~gkv~d- 187 (327)
T TIGR02845 123 FADRVLAATSSHYATAERQFRYPTEYGVQKPP---TAQWTVTGAGAVLLASTGGGP-----RITSA------TIGKVVD- 187 (327)
T ss_pred CCCEEEEEEecccchhhhhcccccccccCCCC---eeeEEEcccEEEEEeecCCCC-----ceEEE------EEEEEEe-
Confidence 999999999988772 22122 4555 788999999999999876442 22221 1111111
Q ss_pred eeeeccCCCcceeeeChhhhHHHHHHHHHHHHHhhhhccchhHHHHHHHHhhhhhcCCCCCCCCCCCCCccccccEEEec
Q 014606 237 VFQEHDDEGFTGVSLSRSILQVAGEALKANMATLAAMVLPYSELVWYAVSVTWKKIWPPGRKRGPYIPDFRKAFEHFCVH 316 (421)
Q Consensus 237 ~~~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~gl~~~~~~~~~~~did~~i~H 316 (421)
+ |.. |--+| +. ..--.++.++.+.+++.|.++ +|.|.++.-
T Consensus 188 ~----------g~~---d~~nm-ga-----------------amapaa~dti~~h~~d~~~~~--------~~yd~i~tg 228 (327)
T TIGR02845 188 Y----------GIT---DPLDM-GA-----------------AMAPAAADTIEAHFKDTGRSV--------DDYDLIVTG 228 (327)
T ss_pred c----------CCC---Ccccc-hh-----------------hhhHHHHHHHHHHHHHcCCCh--------hhccEEEec
Confidence 0 010 00000 00 001234556667777778884 899999985
Q ss_pred C---CCHHHHHHHHHHCCCChhhhHHHHHHHhcc-------------CCCccchHHHHHH-HHHH---cCCCCCCCeEEE
Q 014606 317 A---GGKAVIDAIKENLKLKDRDVEASKTTLYRF-------------GNTSSSSVWYELS-YLEA---KGKVKKGDKIWQ 376 (421)
Q Consensus 317 q---~~~~~~~~i~~~lgl~~~~~~~s~~~l~~~-------------Gn~~sasi~i~L~-~~~~---~g~~~~Gd~vll 376 (421)
- .+++++..+.++-|++.++. +.++ |-.|++..-..+. +.++ +|++ .+||+
T Consensus 229 dlg~vg~~i~~~ll~~~g~~~~~~------~~dcg~~iy~~~~~~~aggsgc~csa~v~~~~~~~~~~~g~~---~r~l~ 299 (327)
T TIGR02845 229 DLARVGSEILRKLLKERGYDVTER------YDDCGVMIYRPDQQVFAGGSGCACSAVVTYGHILKEMLRGKL---KKVLV 299 (327)
T ss_pred chHHHHHHHHHHHHHHcCCChhhc------cccCCeEEEcCCCcccCCCcccchhHHHHHHHHHHHHhcCcc---eEEEE
Confidence 4 57788999988888875432 2222 3333333333333 3333 4444 57999
Q ss_pred Eeeccccc
Q 014606 377 LAFGSGFK 384 (421)
Q Consensus 377 ~~~G~G~~ 384 (421)
++-|+=++
T Consensus 300 v~tgalls 307 (327)
T TIGR02845 300 VATGALLS 307 (327)
T ss_pred EEchhhcC
Confidence 98887443
No 43
>PF02797 Chal_sti_synt_C: Chalcone and stilbene synthases, C-terminal domain; InterPro: IPR012328 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyze the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group []. This domain of chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in the N-terminal domain. ; GO: 0016746 transferase activity, transferring acyl groups; PDB: 3OV2_A 3OV3_B 1Z1F_A 1Z1E_A 3ALE_C 3OIT_A 2H84_A 1TEE_D 1TED_A 2P0U_A ....
Probab=99.78 E-value=2.8e-18 Score=149.34 Aligned_cols=127 Identities=24% Similarity=0.395 Sum_probs=97.7
Q ss_pred eeeeccCCCcceeeeChhhhHHHHHHHHHHHHHhhhhccchhHHHHHHHHhhhhhcCCCCCCCCCCCCCccccccEEEec
Q 014606 237 VFQEHDDEGFTGVSLSRSILQVAGEALKANMATLAAMVLPYSELVWYAVSVTWKKIWPPGRKRGPYIPDFRKAFEHFCVH 316 (421)
Q Consensus 237 ~~~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~gl~~~~~~~~~~~did~~i~H 316 (421)
+.|..++.| +.+.+++++|.++.+++...+. +.|.+.|++. .|+.+|++|
T Consensus 17 m~~~i~~~G-f~~~Ls~~vP~~i~~~i~~~~~---------------------~~L~~~g~~~--------~~~~~wavH 66 (151)
T PF02797_consen 17 MGWDIGDTG-FHFILSKEVPDLISDNIPPFVE---------------------DLLARHGLSD--------WDILFWAVH 66 (151)
T ss_dssp EEEEEETTE-EEEEE-TTHHHHHHHHHHHHHH---------------------HHHHGGTCCS--------GGGSEEEEE
T ss_pred eEEEEeCCe-EEEEEhhHhHHHHHHHHHHHHH---------------------HHHhhhcccc--------cccceeeec
Confidence 444444445 5788999999988766544332 3344556653 456799999
Q ss_pred CCCHHHHHHHHHHCCCChhhhHHHHHHHhccCCCccchHHHHHHHHHH----cCCCCC---CCeEEEEeeccccccccee
Q 014606 317 AGGKAVIDAIKENLKLKDRDVEASKTTLYRFGNTSSSSVWYELSYLEA----KGKVKK---GDKIWQLAFGSGFKCNSAV 389 (421)
Q Consensus 317 q~~~~~~~~i~~~lgl~~~~~~~s~~~l~~~Gn~~sasi~i~L~~~~~----~g~~~~---Gd~vll~~~G~G~~~~~~l 389 (421)
+++++|++.+.+.|+++++++.+|+.++++||||+|+++++.|+++++ +|.... ++++++++||+|++..+++
T Consensus 67 PGG~~ILd~v~~~L~L~~~~l~~Sr~vLr~yGNmSSaTVlfVL~~~~~~~~~~g~~~~~~g~~~gv~~afGPG~t~E~~l 146 (151)
T PF02797_consen 67 PGGRKILDAVEEALGLSPEQLRASREVLREYGNMSSATVLFVLERMRRKSAEEGAPPPGEGGEWGVMLAFGPGLTIEGML 146 (151)
T ss_dssp -SSHHHHHHHHHHHTS-GGGGHHHHHHHHHH-B-GGGHHHHHHHHHHHHHHHTTTSBTTTTBSEEEEEEEETTTEEEEEE
T ss_pred CChHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCcchHHHHHHHHhhhhhhcccCCCCCCCeEEEEEECCcceEeeEE
Confidence 999999999999999999999999999999999999999999999887 454433 4899999999999999999
Q ss_pred eeee
Q 014606 390 WKCI 393 (421)
Q Consensus 390 lr~~ 393 (421)
||..
T Consensus 147 Lr~~ 150 (151)
T PF02797_consen 147 LRSV 150 (151)
T ss_dssp EEE-
T ss_pred EeeC
Confidence 9863
No 44
>KOG1393 consensus Hydroxymethylglutaryl-CoA synthase [Lipid transport and metabolism]
Probab=99.77 E-value=1.1e-17 Score=159.62 Aligned_cols=323 Identities=16% Similarity=0.208 Sum_probs=210.5
Q ss_pred CCceEEEEeeeecCCCCCccCHHHHHHHHHHcCCCChHHHHHHHHHHHHcCCCCceecCCCCCCCCCCCChHHHHHHHHH
Q 014606 8 SKRVYLVDFICYKAPESLRAPISAFIEHTERSGTFDSKAVEFQTKVLERSGVGNETCLPCGTHLLPADGSLNSSMEELKT 87 (421)
Q Consensus 8 ~~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~s~~~~~~~~~~ 87 (421)
+.+|+|.++..|+|.+ .|+++|+++.-+. +.. + -.+|+.+-...- ....|++..
T Consensus 9 p~dvGI~aieiyfP~~--yV~Q~elEk~d~v----s~g------K--ytIGLGq~~Mgf------------csdrEDi~S 62 (462)
T KOG1393|consen 9 PKDVGIIAIEIYFPSQ--YVDQEELEKFDGV----SAG------K--YTIGLGQTQMGF------------CSDREDIIS 62 (462)
T ss_pred ccccceeEEEEEcCcc--ccChhhHhhcCCc----ccc------c--eEeccCcceecc------------cCchhhhhh
Confidence 4589999999999999 9999999975432 211 1 135666544311 112355678
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEec-cCCCCCCcHHHHHHHHcC--CCCCceeeeeeCCcchHHHHHHHHHHHHHHcc
Q 014606 88 VLFSIVQDLFSKHKINPKSIDILITNC-SVSCPTPSVAAMVINKFG--LKSNVRSFHLSGMGCSAGILSISLAKDLLRVQ 164 (421)
Q Consensus 88 la~~Aa~~aL~~ag~~~~~Id~li~~s-s~~~~~p~~a~~l~~~LG--l~~~~~~~~i~~~~C~g~~~al~~A~~li~~g 164 (421)
|+..+.++++++-.++++.|+.|-++| +--.-..+.-..|.+.++ -..++..+|..+ +|.|+.+||-.|-.+|++.
T Consensus 63 l~ltvvs~Lmery~i~~~~IGRLEVGTETiiDKSKSVKt~LMqLF~~sgNtdIEGiDttn-ACYGGtaALfnavnWiESs 141 (462)
T KOG1393|consen 63 LSLTVVSRLMERYNIDPDSIGRLEVGTETIIDKSKSVKTVLMQLFEESGNTDIEGIDTTN-ACYGGTAALFNAVNWIESS 141 (462)
T ss_pred hhHHHHHHHHHHhCCChhhcceEEecceeccccchHHHHHHHHHhhhcCCCccccccccc-cccccHHHHHHHhhhhhhc
Confidence 999999999999999999999999998 433334455556666665 334799999996 9999999999999999998
Q ss_pred C--CCeEEEEEeccccCCCccCCCccchhhhcccccCcEEEEEecCCccccccceeeeeeeeeeecCCCccceeeeeecc
Q 014606 165 K--NSLALVLSMESVSSNGYQGKVKYMQLANCLFRMGGAGILLSNKKEDRQRAKYELQHLVRTHLGSKDTAYKCVFQEHD 242 (421)
Q Consensus 165 ~--~~~vLvv~~e~~s~~~~~~~d~~~~~~~~lfGDGAaA~lL~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~ 242 (421)
. .+.+|||++|..-.. .+.- ..+=|-||+|+|++++..-. |+- ++..+++. ..|+ ++-|
T Consensus 142 sWDGr~aivV~gDIAvY~--~G~a------RpTGGAgAVAmLIgPnApi~----fer-glr~thM~---hayD-FyKP-- 202 (462)
T KOG1393|consen 142 SWDGRYAIVVCGDIAVYA--KGNA------RPTGGAGAVAMLIGPNAPII----FER-GLRATHMQ---HAYD-FYKP-- 202 (462)
T ss_pred ccCCceeEEEEeeEEEec--CCCC------CCCCCcceEEEEEcCCCceE----ecc-cchhhhhh---hhhh-ccCC--
Confidence 6 689999999985321 1222 23679999999999876431 211 12222221 1222 1111
Q ss_pred CCCcceeeeChhhhHHHHHHH-HHHHHHhhhhccchhHHHHHHHHhhhhhcCCC-CCCCCCCCCCccccccEEEecCCCH
Q 014606 243 DEGFTGVSLSRSILQVAGEAL-KANMATLAAMVLPYSELVWYAVSVTWKKIWPP-GRKRGPYIPDFRKAFEHFCVHAGGK 320 (421)
Q Consensus 243 ~~g~~~~~l~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~-gl~~~~~~~~~~~did~~i~Hq~~~ 320 (421)
.+..+.|-+.+... .-++..+ ...|....+.+.+...+. +.. ++++|++++|.+--
T Consensus 203 -------dl~SEyPvVDGklSi~cYl~Al-------d~cY~~~~kK~~~~~~~~~~~~--------l~~fdy~ifHsP~c 260 (462)
T KOG1393|consen 203 -------DLLSEYPVVDGKLSIQCYLSAL-------DRCYTVYRKKIAAQWQKSGSDN--------LNSFDYIIFHSPYC 260 (462)
T ss_pred -------CCCCcCceecCeehHHHHHHHH-------HHHHHHHHHHHHHHhccccCcc--------cccCCeEEEeCchh
Confidence 12223343333211 1111111 122333333333333222 222 47999999999977
Q ss_pred HHHHHHHH------------------------------------------HCCCChhhhHHHHHHHhccCCCccchHHHH
Q 014606 321 AVIDAIKE------------------------------------------NLKLKDRDVEASKTTLYRFGNTSSSSVWYE 358 (421)
Q Consensus 321 ~~~~~i~~------------------------------------------~lgl~~~~~~~s~~~l~~~Gn~~sasi~i~ 358 (421)
++.+.-.. ...+-.+|..+|...-.+.|||.++|+...
T Consensus 261 KlvqKs~arl~ynDf~~~~~~~~~~~~~~~~~~l~~s~~dr~~ek~~~~~s~~~~~~Kt~~sl~~~~~~GNmYTaSly~~ 340 (462)
T KOG1393|consen 261 KLVQKSLARLLYNDFLLNPSQLPESAGLESTLKLDESYTDRDLEKAFIKISKPIFKKKTKPSLLAPRRNGNMYTASLYAS 340 (462)
T ss_pred hhHHHHHHHhhhhhhhhccccccccccccccccccccccchHHHHHHHHHhHHHHHhhccceeEeeccCCccccHHHHHH
Confidence 76655111 112222344433333357899999999999
Q ss_pred HHHHHHcC--CCCCCCeEEEEeecccccccceeeeeeccCCC
Q 014606 359 LSYLEAKG--KVKKGDKIWQLAFGSGFKCNSAVWKCISNLRP 398 (421)
Q Consensus 359 L~~~~~~g--~~~~Gd~vll~~~G~G~~~~~~llr~~~~~~~ 398 (421)
|..++... .--.|.+|.++++|+|++.+.+-+|+..+-+|
T Consensus 341 l~sll~~~~~d~l~Gkrig~FSYGSGlAAs~fs~~v~~da~p 382 (462)
T KOG1393|consen 341 LASLLSAVPADELAGKRIGMFSYGSGLAASMFSLRVTQDATP 382 (462)
T ss_pred HHHHHhccchhhhhccEEEEEeecCcchhheEEEEecCCCCc
Confidence 99998865 22359999999999999999999999987765
No 45
>PRK08304 stage V sporulation protein AD; Validated
Probab=99.74 E-value=8.6e-17 Score=154.41 Aligned_cols=233 Identities=15% Similarity=0.197 Sum_probs=156.3
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHHccC
Q 014606 86 KTVLFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLRVQK 165 (421)
Q Consensus 86 ~~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~~g~ 165 (421)
.+|+.+|+++||+++|++++|||++|+++..++ +..+..+++.||+ +++++++ +|+++..||.+|..+|++|.
T Consensus 57 seLa~eAa~~ALekAGI~~~DID~lI~Gdll~Q--~~sAs~vA~~LGI----Pa~dV~g-ACST~~~AL~lAa~lI~SG~ 129 (337)
T PRK08304 57 RKMMEDAIQQALQKANLKKSDIDYLLAGDLLNQ--IISANFAARELGI----PFLGLYG-ACSTMMESLALGSMLIDGGF 129 (337)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCC--cchHHHHHHHhCC----cEEEEec-cCHHHHHHHHHHHHHHhcCC
Confidence 479999999999999999999999999875433 4678899999987 6899995 99999999999999999999
Q ss_pred CCeEEEEEeccccCC---CccC-----CCccchhhhcccccCcEEEEEecCCccccccceeeeeeeeeeecCCCccceee
Q 014606 166 NSLALVLSMESVSSN---GYQG-----KVKYMQLANCLFRMGGAGILLSNKKEDRQRAKYELQHLVRTHLGSKDTAYKCV 237 (421)
Q Consensus 166 ~~~vLvv~~e~~s~~---~~~~-----~d~~~~~~~~lfGDGAaA~lL~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~ 237 (421)
+++|||++++..+.. |+.+ +.+. +..+++|||+|+||++..... ++.++ |-|+-.+ +
T Consensus 130 ad~VLVV~Ssh~s~aerqfr~P~eyg~qrp~---taqwtvtGAGA~i~~~~~~~~-----~i~~~------t~Gkv~D-~ 194 (337)
T PRK08304 130 ADRVLAATSSHFATAERQFRFPTEYGGQRPP---TAQWTVTGAGAVLLSREGSGP-----RITHA------TIGKVVD-L 194 (337)
T ss_pred CCEEEEEEcchhhhhhhhccCchhccccCCC---cceEEeeccEEEEEecCCCCc-----eEEEE------eEEEEEe-c
Confidence 999999999998764 3222 2222 678999999999999875432 22221 1111111 0
Q ss_pred eeeccCCCcceeeeChhhhHHHHHHHHHHHHHhhhhccchhHHHHHHHHhhhhhcCCCCCCCCCCCCCccccccEEEecC
Q 014606 238 FQEHDDEGFTGVSLSRSILQVAGEALKANMATLAAMVLPYSELVWYAVSVTWKKIWPPGRKRGPYIPDFRKAFEHFCVHA 317 (421)
Q Consensus 238 ~~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~gl~~~~~~~~~~~did~~i~Hq 317 (421)
|.. |.-+| +. ..--.++.++.+.+++.|.++ +|.|.++.--
T Consensus 195 ----------g~~---d~~nm-ga-----------------aMapAa~dti~~h~~d~~~~~--------~~yDli~tGD 235 (337)
T PRK08304 195 ----------GIK---DPNDM-GA-----------------AMAPAAADTIQQHFKDTGRSP--------EDYDLIVTGD 235 (337)
T ss_pred ----------CCC---Ccccc-hh-----------------hhhHHHHHHHHHHHHHcCCCh--------hhccEEEEcc
Confidence 010 00000 00 001234556666777788884 8999999854
Q ss_pred ---CCHHHHHHHHHHCCCChhhhHHHHHH----H---hc---cCCCccchHHHHHH-HHHH---cCCCCCCCeEEEEeec
Q 014606 318 ---GGKAVIDAIKENLKLKDRDVEASKTT----L---YR---FGNTSSSSVWYELS-YLEA---KGKVKKGDKIWQLAFG 380 (421)
Q Consensus 318 ---~~~~~~~~i~~~lgl~~~~~~~s~~~----l---~~---~Gn~~sasi~i~L~-~~~~---~g~~~~Gd~vll~~~G 380 (421)
.++.++..+.++-|++.++.+ .+. + .+ -|-.|++..-+.+. +.++ +|++ .+||+++-|
T Consensus 236 lg~vG~~i~~~ll~~~g~~~~~~~--~DcG~~iy~~~~q~~~aGgSGc~csa~v~~~~~~~~~~~g~~---~rvl~v~tG 310 (337)
T PRK08304 236 LGRVGREILKELLKEEGYDIGDNY--NDCGLMIYDSEQQDVFAGGSGCACSAVVTYGYLLKELQKGKL---KRVLVVATG 310 (337)
T ss_pred hHHHHHHHHHHHHHHhCCChhhcc--cccCeEEeccCCCcccCCCcccchhHHHHHHHHHHHHhcCCc---eEEEEEEch
Confidence 577899999988888764322 111 0 11 23334433333333 3333 4544 579999888
Q ss_pred cccc
Q 014606 381 SGFK 384 (421)
Q Consensus 381 ~G~~ 384 (421)
+=++
T Consensus 311 aLls 314 (337)
T PRK08304 311 ALLS 314 (337)
T ss_pred hhcC
Confidence 7443
No 46
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=99.65 E-value=2.9e-15 Score=151.25 Aligned_cols=94 Identities=16% Similarity=0.255 Sum_probs=83.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEec-cCCCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHHc
Q 014606 85 LKTVLFSIVQDLFSKHKINPKSIDILITNC-SVSCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLRV 163 (421)
Q Consensus 85 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s-s~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~~ 163 (421)
..+|+.+|+++||+++|++++|||.||+++ .+++..|..+..++..||+++++++++++ .+|++++.+|.+|..+|++
T Consensus 22 ~~~La~~A~~~AL~dAgl~~~dID~vi~~~~~~~~~~~~~a~~v~~~lGl~~~~~~~~v~-~~c~s~~~al~~A~~~I~s 100 (386)
T cd00751 22 ADDLGAAVIKALLERAGLDPEEVDDVIMGNVLQAGEGQNPARQAALLAGLPESVPATTVN-RVCGSGLQAVALAAQSIAA 100 (386)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCchhhhc-cccHHHHHHHHHHHHHHHC
Confidence 358999999999999999999999999876 45555778888899999998458899999 5999999999999999999
Q ss_pred cCCCeEEEEEeccccC
Q 014606 164 QKNSLALVLSMESVSS 179 (421)
Q Consensus 164 g~~~~vLvv~~e~~s~ 179 (421)
|..++|||+++|.+|.
T Consensus 101 G~~~~vLv~g~e~~s~ 116 (386)
T cd00751 101 GEADVVVAGGVESMSR 116 (386)
T ss_pred CCCCeEEEeeeecccc
Confidence 9999999999998653
No 47
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=99.64 E-value=1.4e-14 Score=147.19 Aligned_cols=315 Identities=14% Similarity=0.154 Sum_probs=181.0
Q ss_pred CceEEEEeeeecCCCCCccCHHHHHHHHHHcC-CCChHHHHHHHHHHHHcCCCCceec-CCCCCCCCCCCChHH--HHHH
Q 014606 9 KRVYLVDFICYKAPESLRAPISAFIEHTERSG-TFDSKAVEFQTKVLERSGVGNETCL-PCGTHLLPADGSLNS--SMEE 84 (421)
Q Consensus 9 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~-~~~~~~~~~~~~i~~~~GI~~R~~~-~~~~~~~~~~~s~~~--~~~~ 84 (421)
+.|.|+|+|...|.- .+.+++.+.+.... .+.+ . .. ++......+... .++... ....+... ....
T Consensus 1 ~~i~I~G~g~~~p~g---~~~~~~~~~l~~g~~~~~~--~---~~-~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~ 70 (406)
T cd00834 1 RRVVITGLGAVTPLG---NGVEEFWEALLAGRSGIRP--I---TR-FDASGFPSRIAGEVPDFDP-EDYLDRKELRRMDR 70 (406)
T ss_pred CcEEEECcceeCCCc---CCHHHHHHHHHcCCCeeEE--C---Cc-ccccCCCccEEEEcCCCCh-hhcCCHHHhccCCH
Confidence 368999999999986 78888888764210 0100 0 00 000111111110 011000 00000000 1123
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccE----EEEec-cCC--------------------------CCCCcHHHHHHHHcCC
Q 014606 85 LKTVLFSIVQDLFSKHKINPKSIDI----LITNC-SVS--------------------------CPTPSVAAMVINKFGL 133 (421)
Q Consensus 85 ~~~la~~Aa~~aL~~ag~~~~~Id~----li~~s-s~~--------------------------~~~p~~a~~l~~~LGl 133 (421)
..+|+.+|+++||+++|+++++||. +++++ ..+ ...+..+.+|+..||+
T Consensus 71 ~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl 150 (406)
T cd00834 71 FAQFALAAAEEALADAGLDPEELDPERIGVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIRLGL 150 (406)
T ss_pred HHHHHHHHHHHHHHHcCCCcccCCccceEEEEccCCcchHHHHHHHHHHHhcCCcccChhHHhhhcccHHHHHHHHHhCC
Confidence 4579999999999999999876653 44443 221 1235578899999999
Q ss_pred CCCceeeeeeCCcchHHHHHHHHHHHHHHccCCCeEEEEEeccccCC-----------C-----------ccC-CCccch
Q 014606 134 KSNVRSFHLSGMGCSAGILSISLAKDLLRVQKNSLALVLSMESVSSN-----------G-----------YQG-KVKYMQ 190 (421)
Q Consensus 134 ~~~~~~~~i~~~~C~g~~~al~~A~~li~~g~~~~vLvv~~e~~s~~-----------~-----------~~~-~d~~~~ 190 (421)
+ .+.+.++ .+|++++.||..|..+|++|..++|||+++|..+.. + .+. .++
T Consensus 151 ~--g~~~~v~-~acas~~~Al~~A~~~i~~G~~d~aLvgg~d~~~~p~~~~~~~~~~~l~~~~~~p~~~~~pf~~~~--- 224 (406)
T cd00834 151 R--GPNYTVS-TACASGAHAIGDAARLIRLGRADVVIAGGAEALITPLTLAGFAALRALSTRNDDPEKASRPFDKDR--- 224 (406)
T ss_pred C--Ccccccc-hHHHHHHHHHHHHHHHHHcCCCCEEEEcCcccccCHHHHHHHHhcCCcCCCCCCCccCCCCCCCCC---
Confidence 5 5889999 599999999999999999999999999999987610 0 000 112
Q ss_pred hhhcccccCcEEEEEecCCccccccceeeee-eeeeeecCCCccceeeeeeccCCCcceeeeChhhhHHHHHHHHHHHHH
Q 014606 191 LANCLFRMGGAGILLSNKKEDRQRAKYELQH-LVRTHLGSKDTAYKCVFQEHDDEGFTGVSLSRSILQVAGEALKANMAT 269 (421)
Q Consensus 191 ~~~~lfGDGAaA~lL~~~~~~~~~~~~~~~~-~~~~~~~t~~~~~~~~~~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~~ 269 (421)
..+++||||+|+||++.+.... .+..+.. +.......++.. ... .. |. ...
T Consensus 225 -~g~~~geGA~a~vL~~~~~A~~-~g~~~~a~i~g~~~~~d~~~---~~~-----------~~---~~--~~~------- 276 (406)
T cd00834 225 -DGFVLGEGAGVLVLESLEHAKA-RGAKIYAEILGYGASSDAYH---ITA-----------PD---PD--GEG------- 276 (406)
T ss_pred -CCEeeeccEEEEEEecHHHHHH-CCCeEEEEEEEEEecccCCC---CCC-----------CC---CC--cHH-------
Confidence 3678999999999998654311 0111101 111111111100 000 00 00 000
Q ss_pred hhhhccchhHHHHHHHHhhhhhcCCCCCCCCCCCCCccccccEEEecCCCHHHH-----HHHHHHCCCChhhhHHHHHHH
Q 014606 270 LAAMVLPYSELVWYAVSVTWKKIWPPGRKRGPYIPDFRKAFEHFCVHAGGKAVI-----DAIKENLKLKDRDVEASKTTL 344 (421)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~i~~~l~~~gl~~~~~~~~~~~did~~i~Hq~~~~~~-----~~i~~~lgl~~~~~~~s~~~l 344 (421)
..+.+.++|.++|++ ++|||++.+|..+.... +.+.+.++-..+++.- ...-
T Consensus 277 --------------~~~~i~~al~~agi~--------~~dId~v~~h~tgt~~~d~~E~~al~~~~~~~~~~~~v-~s~k 333 (406)
T cd00834 277 --------------AARAMRAALADAGLS--------PEDIDYINAHGTSTPLNDAAESKAIKRVFGEHAKKVPV-SSTK 333 (406)
T ss_pred --------------HHHHHHHHHHHcCCC--------HHHCCEEecccccCccccHHHHHHHHHHhcccCCCCce-eCcc
Confidence 112344566778998 49999999998765433 3445555543223320 1334
Q ss_pred hccCCCccchHHHHHHHH---HHcCCCCC------------------------CCeEEEEeecccccccceee
Q 014606 345 YRFGNTSSSSVWYELSYL---EAKGKVKK------------------------GDKIWQLAFGSGFKCNSAVW 390 (421)
Q Consensus 345 ~~~Gn~~sasi~i~L~~~---~~~g~~~~------------------------Gd~vll~~~G~G~~~~~~ll 390 (421)
..+||+.+|+-.+.|..+ +++|.+.+ -.+++..+||.|.+-.+++|
T Consensus 334 ~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl 406 (406)
T cd00834 334 SMTGHLLGAAGAVEAIATLLALRDGVLPPTINLEEPDPECDLDYVPNEAREAPIRYALSNSFGFGGHNASLVF 406 (406)
T ss_pred hhhccchhhhhHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccccCCCCccccccEEEEeeecCCceeeEEEC
Confidence 558999999988877754 44453321 13456667777766555543
No 48
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=99.63 E-value=1.1e-14 Score=147.27 Aligned_cols=94 Identities=18% Similarity=0.277 Sum_probs=83.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEec-cCCCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHHc
Q 014606 85 LKTVLFSIVQDLFSKHKINPKSIDILITNC-SVSCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLRV 163 (421)
Q Consensus 85 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s-s~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~~ 163 (421)
..+|+.+|+++||+++|+++++||.||+++ ++....+..+..++..+|++..+++++|+ .+|++++.++..|.++|++
T Consensus 26 ~~~La~~A~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~a~~va~~lGl~~~~p~~~V~-~~Casg~~ai~~A~~~I~s 104 (393)
T PRK05656 26 AVELGAAVIRRLLEQTGLDPAQVDEVILGQVLTAGAGQNPARQAAIKAGLPHSVPAMTLN-KVCGSGLKALHLAAQAIRC 104 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCCCCCcHHHHHHHHcCCCCCcceEEec-ccchhHHHHHHHHHHHHHc
Confidence 358999999999999999999999999987 44434566788899999998458999999 5999999999999999999
Q ss_pred cCCCeEEEEEeccccC
Q 014606 164 QKNSLALVLSMESVSS 179 (421)
Q Consensus 164 g~~~~vLvv~~e~~s~ 179 (421)
|..++|||+++|.+|.
T Consensus 105 G~~d~vLv~G~E~ms~ 120 (393)
T PRK05656 105 GDAEVIIAGGQENMSL 120 (393)
T ss_pred CCCCEEEEEEEhhhcc
Confidence 9999999999997653
No 49
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=99.62 E-value=1e-14 Score=147.05 Aligned_cols=94 Identities=19% Similarity=0.354 Sum_probs=83.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEec-cCCCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHHc
Q 014606 85 LKTVLFSIVQDLFSKHKINPKSIDILITNC-SVSCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLRV 163 (421)
Q Consensus 85 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s-s~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~~ 163 (421)
..+|+.+|+++||+++|++++|||.+|+++ +++...|..+..++..+|++.++++++++ .+|++++.+|..|.++|++
T Consensus 21 ~~~La~~A~~~Al~dAgl~~~dID~vv~g~~~~~~~~~~~a~~va~~lGl~~~~~~~~v~-~~Casg~~al~~A~~~I~s 99 (386)
T TIGR01930 21 AEDLGAAVIKELLERNPLDPELIDDVIFGNVLQAGEQQNIARQAALLAGLPESVPAYTVN-RQCASGLQAVILAAQLIRA 99 (386)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCceeeeec-chhhHHHHHHHHHHHHHHC
Confidence 358999999999999999999999999876 45554577788999999998558999999 5999999999999999999
Q ss_pred cCCCeEEEEEeccccC
Q 014606 164 QKNSLALVLSMESVSS 179 (421)
Q Consensus 164 g~~~~vLvv~~e~~s~ 179 (421)
|..++|||+++|.++.
T Consensus 100 G~~~~vLv~g~e~~s~ 115 (386)
T TIGR01930 100 GEADVVVAGGVESMSR 115 (386)
T ss_pred CCCCEEEEEEehhhcc
Confidence 9999999999998654
No 50
>PRK09051 beta-ketothiolase; Provisional
Probab=99.61 E-value=2e-14 Score=145.11 Aligned_cols=94 Identities=14% Similarity=0.250 Sum_probs=81.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEec-cCCCCC-CcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHH
Q 014606 85 LKTVLFSIVQDLFSKHKINPKSIDILITNC-SVSCPT-PSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLR 162 (421)
Q Consensus 85 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s-s~~~~~-p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~ 162 (421)
..+|+.+|+++||+++|++++|||.||+++ +++... +..+..++..+|+++++++++|+ .+|+|++.|+.+|.++|+
T Consensus 27 ~~eL~~~A~~~AL~~agi~~~dID~vi~g~~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~V~-~aCaSg~~Al~~A~~~I~ 105 (394)
T PRK09051 27 PTDLGATVVREALARAGVDPDQVGHVVFGHVIPTEPRDMYLSRVAAINAGVPQETPAFNVN-RLCGSGLQAIVSAAQAIL 105 (394)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEeeeccccCCCccHHHHHHHHcCCCCCCceEEec-ccchHHHHHHHHHHHHHH
Confidence 357999999999999999999999999986 444433 34566677888997568999999 599999999999999999
Q ss_pred ccCCCeEEEEEeccccC
Q 014606 163 VQKNSLALVLSMESVSS 179 (421)
Q Consensus 163 ~g~~~~vLvv~~e~~s~ 179 (421)
+|..++|||+++|.+|.
T Consensus 106 sG~~d~vLvvG~E~mS~ 122 (394)
T PRK09051 106 LGDADVAIGGGAESMSR 122 (394)
T ss_pred cCCCCEEEEEeehhccc
Confidence 99999999999998774
No 51
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=99.57 E-value=6.9e-14 Score=142.96 Aligned_cols=252 Identities=13% Similarity=0.137 Sum_probs=157.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcc----EEEEec-cCCCC-------------------CCcHHHHHHHHcCCCCCceee
Q 014606 85 LKTVLFSIVQDLFSKHKINPKSID----ILITNC-SVSCP-------------------TPSVAAMVINKFGLKSNVRSF 140 (421)
Q Consensus 85 ~~~la~~Aa~~aL~~ag~~~~~Id----~li~~s-s~~~~-------------------~p~~a~~l~~~LGl~~~~~~~ 140 (421)
...|+++|+++||+++|+++++|| .|++++ +.++. .+..+..++..+|++ .+++
T Consensus 87 ~~~l~~~aa~~Al~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lgl~--g~~~ 164 (424)
T smart00825 87 QQRLLLEVAWEALEDAGIDPESLRGSRTGVFVGAMSSDYAELLARDPEDIEGYAATGTARSFIANRISYFFDLR--GPSV 164 (424)
T ss_pred HHHHHHHHHHHHHHHcCCChhHcCCCCCEEEEEEcHHHHHHHHhhCccccchhhhccchhHHHHHHHHHHhCCC--CCcc
Confidence 356999999999999999999998 777765 32221 345678899999996 4889
Q ss_pred eeeCCcchHHHHHHHHHHHHHHccCCCeEEEEEeccccCC-----------Cc-----cCCCccchhhhcccccCcEEEE
Q 014606 141 HLSGMGCSAGILSISLAKDLLRVQKNSLALVLSMESVSSN-----------GY-----QGKVKYMQLANCLFRMGGAGIL 204 (421)
Q Consensus 141 ~i~~~~C~g~~~al~~A~~li~~g~~~~vLvv~~e~~s~~-----------~~-----~~~d~~~~~~~~lfGDGAaA~l 204 (421)
.++ .+|++++.||..|..+|++|..++|||+++|..... .. .+-|. .-..+++||||+|+|
T Consensus 165 ~v~-~acasg~~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~--~~~g~~~geGAaalV 241 (424)
T smart00825 165 TVD-TACSSSLVALHLACQSLRSGECDMALAGGVNLILSPDTFVGFSRAGMLSPDGRCKTFDA--DADGYVRGEGVGVVV 241 (424)
T ss_pred ccc-cHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeecCCHHHHHHHhhcCCCCCCCCCCCCCC--CCCcccccceEEEEE
Confidence 999 599999999999999999999999999999974321 00 00010 013678999999999
Q ss_pred EecCCccccccceeeee-eeeeeecCCCccceeeeeeccCCCcceeeeChhhhHHHHHHHHHHHHHhhhhccchhHHHHH
Q 014606 205 LSNKKEDRQRAKYELQH-LVRTHLGSKDTAYKCVFQEHDDEGFTGVSLSRSILQVAGEALKANMATLAAMVLPYSELVWY 283 (421)
Q Consensus 205 L~~~~~~~~~~~~~~~~-~~~~~~~t~~~~~~~~~~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (421)
|++.+.... .+..+.. +......+++... + +. .|.. . .
T Consensus 242 Le~~e~A~~-~g~~i~a~I~g~~~~~~~~~~----------~-----~~--~~~~--~---------------------~ 280 (424)
T smart00825 242 LKRLSDALR-DGDPILAVIRGSAVNQDGRSN----------G-----LT--APSG--P---------------------A 280 (424)
T ss_pred EccHHHHHH-CCCeEEEEEEEEEEeCCCCCC----------C-----CC--CcCH--H---------------------H
Confidence 998543211 0111111 1112222221100 0 00 0100 0 0
Q ss_pred HHHhhhhhcCCCCCCCCCCCCCccccccEEEecCCCH-----HHHHHHHHHCCCCh---hhhHHHHHHHhccCCCccchH
Q 014606 284 AVSVTWKKIWPPGRKRGPYIPDFRKAFEHFCVHAGGK-----AVIDAIKENLKLKD---RDVEASKTTLYRFGNTSSSSV 355 (421)
Q Consensus 284 ~~~~i~~~l~~~gl~~~~~~~~~~~did~~i~Hq~~~-----~~~~~i~~~lgl~~---~~~~~s~~~l~~~Gn~~sasi 355 (421)
....+.++|.++|+++ +|||++.+|-.+. .-.+.+.+.++... .++.- -..-..+||+.+|+-
T Consensus 281 ~~~a~~~al~~Agl~~--------~dId~i~~h~tgt~~~d~~E~~al~~~~~~~~~~~~~~~v-~s~k~~~Gh~~~AsG 351 (424)
T smart00825 281 QARLIRQALARAGVDP--------ADVDYVEAHGTGTPLGDPIEAEALAAVFGQGRPRDGPLLL-GSVKSNIGHLEAAAG 351 (424)
T ss_pred HHHHHHHHHHHhCCCH--------HHccEEEeeCCCCCCCCHHHHHHHHHHHhccCCCCCceEE-eccccccCCcccchh
Confidence 1123446677789984 9999999995443 22345555565321 12210 123345799999987
Q ss_pred HHHHHHH---HHcCCCC--------------------------------CCCeEEEEeecccccccceeee
Q 014606 356 WYELSYL---EAKGKVK--------------------------------KGDKIWQLAFGSGFKCNSAVWK 391 (421)
Q Consensus 356 ~i~L~~~---~~~g~~~--------------------------------~Gd~vll~~~G~G~~~~~~llr 391 (421)
.+.|..+ +++|.+. .-+.++..+||-|...++++++
T Consensus 352 ~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~gfgg~n~~lvl~ 422 (424)
T smart00825 352 VAGLIKVVLALRHGTIPPTLHFETPNPHIDLEESPLRVPTEATPWPATGRPRRAGVSSFGFGGTNAHVILE 422 (424)
T ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcccCceEccCCCcCCCCCCCccEEEEeccCCCCceEEEEEe
Confidence 7777653 3333211 1355777888888777777765
No 52
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=99.57 E-value=6.4e-14 Score=141.58 Aligned_cols=94 Identities=20% Similarity=0.310 Sum_probs=80.2
Q ss_pred HHHHHHHHHHHHHHhC-CCCCCCccEEEEec-cCCCCCCcHHHH-HHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHH
Q 014606 85 LKTVLFSIVQDLFSKH-KINPKSIDILITNC-SVSCPTPSVAAM-VINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLL 161 (421)
Q Consensus 85 ~~~la~~Aa~~aL~~a-g~~~~~Id~li~~s-s~~~~~p~~a~~-l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li 161 (421)
..+|+.+|++++|+++ |++++|||.||+++ .++...+....+ +...+|++..+++++|+ .+|++++.|+..|..+|
T Consensus 31 ~~eLa~~A~~~AL~~a~gl~~~dID~vi~g~~~~~~~~~~~~ar~~~~~~Gl~~~~p~~~V~-~aCaSg~~Al~~A~~~I 109 (399)
T PRK09052 31 PDDLLAHVLRSAVAQVPGLDPKLIEDAIVGCAMPEAEQGLNVARIGALLAGLPNSVGGVTVN-RFCASGLQAVAMAADRI 109 (399)
T ss_pred HHHHHHHHHHHHHHhccCcCHHHCCEEEEEecCCCCCCCchHHHHHHHHcCCCCCCceeeec-chhhHHHHHHHHHHHHH
Confidence 3589999999999997 99999999999986 555555555555 45666997458999999 59999999999999999
Q ss_pred HccCCCeEEEEEeccccC
Q 014606 162 RVQKNSLALVLSMESVSS 179 (421)
Q Consensus 162 ~~g~~~~vLvv~~e~~s~ 179 (421)
++|..++|||+++|.+|.
T Consensus 110 ~sG~~d~vLv~G~E~mS~ 127 (399)
T PRK09052 110 RVGEADVMIAAGVESMSM 127 (399)
T ss_pred HCCCCCEEEEEEEecccc
Confidence 999999999999998763
No 53
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=99.55 E-value=1.4e-13 Score=138.97 Aligned_cols=94 Identities=22% Similarity=0.328 Sum_probs=85.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEec-cCCCCCC-cHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHH
Q 014606 85 LKTVLFSIVQDLFSKHKINPKSIDILITNC-SVSCPTP-SVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLR 162 (421)
Q Consensus 85 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s-s~~~~~p-~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~ 162 (421)
+.+|+.+|++++|+++|+++++||.||+++ .++...| ..+..++..+|++.++++++|+ .+|+|++.||.+|..+|+
T Consensus 27 ~~dL~~~A~~~aL~~agi~~~~ID~vi~G~~~~~~~~~~~~a~~i~~~lGl~~~~p~~~V~-~aCaSg~~Al~~A~~~I~ 105 (392)
T PRK07108 27 GATLGGHVVQHAVERAKLDPAEVEDVIMGCANPEGATGANIARQIALRAGLPVTVPGMTVN-RFCSSGLQTIALAAQRVI 105 (392)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCcEEEEEeecccccccHHHHHHHHHcCCCCCCceeeec-chhhHHHHHHHHHHHHHH
Confidence 358999999999999999999999999986 5565555 4889999999998669999999 599999999999999999
Q ss_pred ccCCCeEEEEEeccccC
Q 014606 163 VQKNSLALVLSMESVSS 179 (421)
Q Consensus 163 ~g~~~~vLvv~~e~~s~ 179 (421)
+|..+.+|++++|.+|.
T Consensus 106 sG~~d~vlagGvE~ms~ 122 (392)
T PRK07108 106 AGEGDVFVAGGVESISC 122 (392)
T ss_pred CCCCCEEEEEEEeccCC
Confidence 99999999999999875
No 54
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=99.55 E-value=1.9e-13 Score=138.19 Aligned_cols=92 Identities=16% Similarity=0.246 Sum_probs=81.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEec-cCCCC--CCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHH
Q 014606 85 LKTVLFSIVQDLFSKHKINPKSIDILITNC-SVSCP--TPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLL 161 (421)
Q Consensus 85 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s-s~~~~--~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li 161 (421)
..+|+.+|++++|+++|+++++||.+|+++ .++.. .+..+..++..||++ ..+.++++ .+|+++..+|..|..+|
T Consensus 22 ~~eLa~~a~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~~~a~~va~~lGl~-~~~~~~v~-~aCasg~~ai~~A~~~I 99 (389)
T PRK06064 22 LRDLAVEAGLEALEDAGIDGKDIDAMYVGNMSAGLFVSQEHIAALIADYAGLA-PIPATRVE-AACASGGAALRQAYLAV 99 (389)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccccccHHHHHHHHcCCC-CCCeeEEe-CCcHHHHHHHHHHHHHH
Confidence 357999999999999999999999999876 44432 466788999999997 68999999 59999999999999999
Q ss_pred HccCCCeEEEEEecccc
Q 014606 162 RVQKNSLALVLSMESVS 178 (421)
Q Consensus 162 ~~g~~~~vLvv~~e~~s 178 (421)
++|..++|||+++|.++
T Consensus 100 ~sG~~~~vLv~G~e~~s 116 (389)
T PRK06064 100 ASGEADVVLAAGVEKMT 116 (389)
T ss_pred HCCCCCEEEEEEEEecc
Confidence 99999999999999765
No 55
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=99.54 E-value=3e-13 Score=136.38 Aligned_cols=91 Identities=11% Similarity=0.097 Sum_probs=78.9
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCC--CcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHHc
Q 014606 86 KTVLFSIVQDLFSKHKINPKSIDILITNCSVSCPT--PSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLRV 163 (421)
Q Consensus 86 ~~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~--p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~~ 163 (421)
.+|+++|+++||+++|++++|||.+++++++++.. +..+..|++.||++ ..++++++ .+|+++..++..|..+|++
T Consensus 25 ~eL~~eAa~~Al~dAgl~~~dID~iv~~~~~~~~~~~~~~~~~va~~LGl~-~~~~~~v~-~~casg~~al~~A~~~I~s 102 (386)
T PRK08313 25 AGLVREAIDRALADAGLTWDDIDAVVVGKAPDFFEGVMMPELFLADALGAT-GKPLIRVH-TAGSVGGSTAVVAASLVQS 102 (386)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEeccccccccccCchHHHHHhcCCC-CCceEEEe-ccCHHHHHHHHHHHHHHHC
Confidence 57999999999999999999999999876544321 22347899999997 67899999 4999999999999999999
Q ss_pred cCCCeEEEEEecccc
Q 014606 164 QKNSLALVLSMESVS 178 (421)
Q Consensus 164 g~~~~vLvv~~e~~s 178 (421)
|..++||||++|..+
T Consensus 103 G~~~~vLVvg~e~~s 117 (386)
T PRK08313 103 GVYRRVLAVAWEKQS 117 (386)
T ss_pred CCCCEEEEEEEEEcc
Confidence 999999999999764
No 56
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=99.54 E-value=1.8e-13 Score=138.14 Aligned_cols=94 Identities=17% Similarity=0.310 Sum_probs=82.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEec-cCCCCC-CcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHH
Q 014606 85 LKTVLFSIVQDLFSKHKINPKSIDILITNC-SVSCPT-PSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLR 162 (421)
Q Consensus 85 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s-s~~~~~-p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~ 162 (421)
+.+|+.+|++++|+++|+++++||.||+++ ++.... +..+...+..+|++.++++++|+ .+|+|++.||.+|.++|+
T Consensus 28 ~~dLa~~A~~~al~~agi~p~~ID~vi~G~~~~~~~~~~~~~r~a~~~~Gl~~~~pa~~Vn-~aCaSg~~Ai~~A~~~I~ 106 (402)
T PRK08242 28 PVRLAAGLLEALRDRNGLDTAAVDDVVLGCVTPVGDQGADIARTAVLAAGLPETVPGVQIN-RFCASGLEAVNLAAAKVR 106 (402)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccccccHHHHHHHHcCCCCCCCeEEEc-chhhhHHHHHHHHHHHHH
Confidence 458999999999999999999999999987 443332 44666777888997679999999 599999999999999999
Q ss_pred ccCCCeEEEEEeccccC
Q 014606 163 VQKNSLALVLSMESVSS 179 (421)
Q Consensus 163 ~g~~~~vLvv~~e~~s~ 179 (421)
+|..++||++++|.+|+
T Consensus 107 sG~~d~vLv~G~E~mS~ 123 (402)
T PRK08242 107 SGWDDLVIAGGVESMSR 123 (402)
T ss_pred cCCCCEEEEEEEEccCC
Confidence 99999999999999875
No 57
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.54 E-value=3.3e-13 Score=137.90 Aligned_cols=317 Identities=12% Similarity=0.135 Sum_probs=180.9
Q ss_pred CCceEEEEeeeecCCCCCccCHHHHHHHHHHcCCCChHHHHHHHHHHHHcCCCCceecCCCCCCCCCCCChHHHHHHHHH
Q 014606 8 SKRVYLVDFICYKAPESLRAPISAFIEHTERSGTFDSKAVEFQTKVLERSGVGNETCLPCGTHLLPADGSLNSSMEELKT 87 (421)
Q Consensus 8 ~~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~s~~~~~~~~~~ 87 (421)
.++|.|.|+|...|-- .+.+++.+.+..- . + ..+.+.. +...++..+....-+.. +... .. .......
T Consensus 10 ~~~VvITG~G~vs~~G---~~~~~~~~~L~~G-~-s--~i~~~~~-~~~~~~~~~~~g~~~~~--~~~~-~~-~~~~~~~ 77 (425)
T PRK06501 10 RPIVAVTGMGVVTSLG---QGKADNWAALTAG-E-S--GIHTITR-FPTEGLRTRIAGTVDFL--PESP-FG-ASALSEA 77 (425)
T ss_pred CcCEEEEeeeEECCCC---CCHHHHHHHHHcC-C-C--ceEcCCc-ccccCCCCceEEEEeec--cccc-cc-ccCHHHH
Confidence 4579999999999986 7888998877431 1 0 0000000 01112222211000000 0000 00 0012346
Q ss_pred HHHHHHHHHHHhCCCCCCCcc------------------EEEEecc----------------CC-------CCCCcHHHH
Q 014606 88 VLFSIVQDLFSKHKINPKSID------------------ILITNCS----------------VS-------CPTPSVAAM 126 (421)
Q Consensus 88 la~~Aa~~aL~~ag~~~~~Id------------------~li~~ss----------------~~-------~~~p~~a~~ 126 (421)
++..|+++||+++|++..+++ .++.++. +. ...++.+.+
T Consensus 78 ~~~~aa~~Al~dAgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 157 (425)
T PRK06501 78 LARLAAEEALAQAGIGKGDFPGPLFLAAPPVELEWPARFALAAAVGDNDAPSYDRLLRAARGGRFDALHERFQFGSIADR 157 (425)
T ss_pred HHHHHHHHHHHHcCCCccccccceeeccccccCCCCceEEEEEecCCccHHHHHHHHhhcCcccCChhhhhhcccHHHHH
Confidence 899999999999998643321 1112111 11 135578899
Q ss_pred HHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHHccCCCeEEEEEecc---------------ccCCCc-------c-
Q 014606 127 VINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLRVQKNSLALVLSMES---------------VSSNGY-------Q- 183 (421)
Q Consensus 127 l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~~g~~~~vLvv~~e~---------------~s~~~~-------~- 183 (421)
|+..+|++ .++++++ .+|+|++.||..|.++|++|..+++||+++|. ++.... +
T Consensus 158 i~~~~gl~--G~~~~i~-~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpf 234 (425)
T PRK06501 158 LADRFGTR--GLPISLS-TACASGATAIQLGVEAIRRGETDRALCIATDGSVSAEALIRFSLLSALSTQNDPPEKASKPF 234 (425)
T ss_pred HHHHhCCC--CCceeec-CccHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHhhccccCCCCCCcccCCC
Confidence 99999996 6889999 59999999999999999999999999999994 221100 0
Q ss_pred CCCccchhhhcccccCcEEEEEecCCccccccceeeeeee-eeeecCCCccceeeeeeccCCCcceeeeChhhhHHHHHH
Q 014606 184 GKVKYMQLANCLFRMGGAGILLSNKKEDRQRAKYELQHLV-RTHLGSKDTAYKCVFQEHDDEGFTGVSLSRSILQVAGEA 262 (421)
Q Consensus 184 ~~d~~~~~~~~lfGDGAaA~lL~~~~~~~~~~~~~~~~~~-~~~~~t~~~~~~~~~~~~~~~g~~~~~l~~~~p~~~~~~ 262 (421)
..+++ .+++||||+|+||++.+.... .+..+...+ ..-...++ .... ... |. +.
T Consensus 235 d~~r~----G~v~GEGaaalVLe~~~~A~~-rg~~i~a~i~g~~~~~d~-----~~~~---------~~~---~~--~~- 289 (425)
T PRK06501 235 SKDRD----GFVMAEGAGALVLESLESAVA-RGAKILGIVAGCGEKADS-----FHRT---------RSS---PD--GS- 289 (425)
T ss_pred CCCCC----CeeeeccEEEEEECcHHHHHH-CCCeEEEEEEEEEEccCC-----CCCC---------CCC---CC--HH-
Confidence 02333 578999999999998654311 112221111 11111111 0000 000 10 00
Q ss_pred HHHHHHHhhhhccchhHHHHHHHHhhhhhcCCCCCCCCCCCCCccccccEEEecCCCHHHHHHH-----HHHCCCChhhh
Q 014606 263 LKANMATLAAMVLPYSELVWYAVSVTWKKIWPPGRKRGPYIPDFRKAFEHFCVHAGGKAVIDAI-----KENLKLKDRDV 337 (421)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~gl~~~~~~~~~~~did~~i~Hq~~~~~~~~i-----~~~lgl~~~~~ 337 (421)
...+.|.++|.++|+++ +|||++.+|-.+....+.. .+.++-....+
T Consensus 290 --------------------~~~~ai~~AL~~agi~p--------~dId~i~~Hgtgt~~~d~~E~~al~~~~~~~~~~~ 341 (425)
T PRK06501 290 --------------------PAIGAIRAALADAGLTP--------EQIDYINAHGTSTPENDKMEYLGLSAVFGERLASI 341 (425)
T ss_pred --------------------HHHHHHHHHHHHcCCCH--------HHcCEEEecCccCcchHHHHHHHHHHHhcccCCCc
Confidence 01133446677789984 8999999998876555443 34454211222
Q ss_pred HHHHHHHhccCCCccchHHHHHHH---HHHcCCCCC------------------------CCeEEEEeecccccccceee
Q 014606 338 EASKTTLYRFGNTSSSSVWYELSY---LEAKGKVKK------------------------GDKIWQLAFGSGFKCNSAVW 390 (421)
Q Consensus 338 ~~s~~~l~~~Gn~~sasi~i~L~~---~~~~g~~~~------------------------Gd~vll~~~G~G~~~~~~ll 390 (421)
.- ...-..+||+.+|+-.+.+.. ++++|.+.| -+.++.-+||-|..-++++|
T Consensus 342 pv-~s~k~~~Gh~~~AsG~~~~~~~~l~l~~~~ipp~~n~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~gfgG~n~~~vl 420 (425)
T PRK06501 342 PV-SSNKSMIGHTLTAAGAVEAVFSLLTIQTGRLPPTINYDNPDPAIPLDVVPNVARDARVTAVLSNSFGFGGQNASLVL 420 (425)
T ss_pred EE-ECCCcccCCCchhhhHHHHHHHHHHHhcCcCCCcCCCCCCCCCCCcccCCCcccCCCCCEEEEeCccCCCeeEEEEE
Confidence 10 122245799998887766643 355554322 23456778888888888888
Q ss_pred eee
Q 014606 391 KCI 393 (421)
Q Consensus 391 r~~ 393 (421)
+..
T Consensus 421 ~~~ 423 (425)
T PRK06501 421 TAE 423 (425)
T ss_pred ecC
Confidence 753
No 58
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=99.54 E-value=3.6e-13 Score=136.99 Aligned_cols=247 Identities=13% Similarity=0.062 Sum_probs=154.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCC-cc----EEEEecc-CC----------------------CCC--CcHHHHHHHHcCCC
Q 014606 85 LKTVLFSIVQDLFSKHKINPKS-ID----ILITNCS-VS----------------------CPT--PSVAAMVINKFGLK 134 (421)
Q Consensus 85 ~~~la~~Aa~~aL~~ag~~~~~-Id----~li~~ss-~~----------------------~~~--p~~a~~l~~~LGl~ 134 (421)
...|+..|+++||+++|+++++ ++ .++++++ .+ ... ...+..|+..+|+.
T Consensus 72 ~~~l~~~aa~~Al~dAGl~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~ 151 (407)
T cd00828 72 TTLLALVATEEALADAGITDPYEVHPSEVGVVVGSGMGGLRFLRRGGKLDARAVNPYVSPKWMLSPNTVAGWVNILLLSS 151 (407)
T ss_pred HHHHHHHHHHHHHHhCCCCccccCCccCeEEEEeeccCCHHHHHHHHHHHhhccCCcccchhccccchHHHHHHHHhCcC
Confidence 4579999999999999998765 33 2444332 11 111 45778999999993
Q ss_pred CCceeeeeeCCcchHHHHHHHHHHHHHHccCCCeEEEEEeccccCC---------------------CccC-CCccchhh
Q 014606 135 SNVRSFHLSGMGCSAGILSISLAKDLLRVQKNSLALVLSMESVSSN---------------------GYQG-KVKYMQLA 192 (421)
Q Consensus 135 ~~~~~~~i~~~~C~g~~~al~~A~~li~~g~~~~vLvv~~e~~s~~---------------------~~~~-~d~~~~~~ 192 (421)
..+.+.+. .+|++++.||..|.++|++|..+.+||+++|..+.. ..+. .++ .
T Consensus 152 -~Gp~~tv~-~aCaS~~~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~f~~~~~ls~~~~~~~~~~~pfd~~~----~ 225 (407)
T cd00828 152 -HGPIKTPV-GACATALEALDLAVEAIRSGKADIVVVGGVEDPLEEGLSGFANMGALSTAEEEPEEMSRPFDETR----D 225 (407)
T ss_pred -CCCCcCcc-cHHHHHHHHHHHHHHHHHcCCCCEEEEccccccChHHHHHHHHcCCCCCCCCCCCcccCCCcCCC----C
Confidence 36889999 599999999999999999999999999999986510 0000 112 4
Q ss_pred hcccccCcEEEEEecCCccccccceeeee-eeeeeecCCCccceeeeeeccCCCcceeeeChhhhHHHHHHHHHHHHHhh
Q 014606 193 NCLFRMGGAGILLSNKKEDRQRAKYELQH-LVRTHLGSKDTAYKCVFQEHDDEGFTGVSLSRSILQVAGEALKANMATLA 271 (421)
Q Consensus 193 ~~lfGDGAaA~lL~~~~~~~~~~~~~~~~-~~~~~~~t~~~~~~~~~~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~~~~ 271 (421)
.+++||||+++||++.+.... .+..+.. +......+++... . .+. ..
T Consensus 226 G~~~gEGAaalvLe~~~~A~~-rg~~i~a~i~g~~~~~d~~~~-----------------~--~~~-~~----------- 273 (407)
T cd00828 226 GFVEAEGAGVLVLERAELALA-RGAPIYGRVAGTASTTDGAGR-----------------S--VPA-GG----------- 273 (407)
T ss_pred cEEeecceEEEEEeeHHHHHH-CCCeEEEEEEEEEeccCCCCC-----------------C--CCC-Ch-----------
Confidence 778999999999998654321 0111111 1111111221100 0 000 00
Q ss_pred hhccchhHHHHHHHHhhhhhcCCCCCCCCCCCCCccccccEEEecCCCHHHH-----HHHHHHCCCC--hhhhHHHHHHH
Q 014606 272 AMVLPYSELVWYAVSVTWKKIWPPGRKRGPYIPDFRKAFEHFCVHAGGKAVI-----DAIKENLKLK--DRDVEASKTTL 344 (421)
Q Consensus 272 ~~~~~~~~~~~~~~~~i~~~l~~~gl~~~~~~~~~~~did~~i~Hq~~~~~~-----~~i~~~lgl~--~~~~~~s~~~l 344 (421)
....+.|.++|+++|+++ +|||++..|-.+-... +.+.+.++-. .-.+ ..+-
T Consensus 274 ----------~~~~~a~~~Al~~Agi~~--------~dId~i~~hgtgt~~~D~~E~~ai~~~~~~~~~~~~v---~s~K 332 (407)
T cd00828 274 ----------KGIARAIRTALAKAGLSL--------DDLDVISAHGTSTPANDVAESRAIAEVAGALGAPLPV---TAQK 332 (407)
T ss_pred ----------HHHHHHHHHHHHHcCCCH--------HHcCEEecccccCccccHHHHHHHHHHHhccCCCcee---eccc
Confidence 001133456677889984 9999999996554332 2333344321 2233 2455
Q ss_pred hccCCCccchHHHHHHHH---HHcCCCCC--------------------------CCeEEEEeecccccccceee
Q 014606 345 YRFGNTSSSSVWYELSYL---EAKGKVKK--------------------------GDKIWQLAFGSGFKCNSAVW 390 (421)
Q Consensus 345 ~~~Gn~~sasi~i~L~~~---~~~g~~~~--------------------------Gd~vll~~~G~G~~~~~~ll 390 (421)
..+||+.+|+-++.|... ++++.+.| -..++..+||.|.+-+++++
T Consensus 333 ~~~Gh~~~Asg~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~s~gfgG~n~~lv~ 407 (407)
T cd00828 333 ALFGHSKGAAGALQLIGALQSLEHGLIPPTANLDDVDPDVEHLSVVGLSRDLNLKVRAALVNAFGFGGSNAALVL 407 (407)
T ss_pred chhccchhhhhHHHHHHHHHHHhcCccCCCCCCCCCCcccccccccCcCccCCCCccEEEEecccCCCcceEEEC
Confidence 779999999998888754 44443221 14567777887776666553
No 59
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=99.54 E-value=3.2e-13 Score=135.87 Aligned_cols=93 Identities=13% Similarity=0.166 Sum_probs=83.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEec-cCCCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHHc
Q 014606 85 LKTVLFSIVQDLFSKHKINPKSIDILITNC-SVSCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLRV 163 (421)
Q Consensus 85 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s-s~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~~ 163 (421)
..+|+.+|+++||+++|+++++||.+++++ .+....+..+..++..||++ .++.++++ .+|++++.++..|..+|++
T Consensus 16 ~~eL~~~A~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~a~~va~~lGl~-~~~~~~v~-~~c~sg~~al~~Aa~~I~s 93 (375)
T cd00829 16 PLELAAEAARAALDDAGLEPADIDAVVVGNAAGGRFQSFPGALIAEYLGLL-GKPATRVE-AAGASGSAAVRAAAAAIAS 93 (375)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecccccccccchHHHHHHHcCCC-CcceeeEe-CccHHHHHHHHHHHHHHHh
Confidence 358999999999999999999999999876 34444577889999999997 78999999 5999999999999999999
Q ss_pred cCCCeEEEEEeccccC
Q 014606 164 QKNSLALVLSMESVSS 179 (421)
Q Consensus 164 g~~~~vLvv~~e~~s~ 179 (421)
|..+.|||+++|.++.
T Consensus 94 G~~~~vlv~g~e~~s~ 109 (375)
T cd00829 94 GLADVVLVVGAEKMSD 109 (375)
T ss_pred CCCCEEEEEEEeeccc
Confidence 9999999999998764
No 60
>PRK05790 putative acyltransferase; Provisional
Probab=99.53 E-value=3.1e-13 Score=136.75 Aligned_cols=93 Identities=17% Similarity=0.263 Sum_probs=78.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEec-cCCCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHHc
Q 014606 85 LKTVLFSIVQDLFSKHKINPKSIDILITNC-SVSCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLRV 163 (421)
Q Consensus 85 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s-s~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~~ 163 (421)
..+|+.+|+++||+++|++++|||.||+++ .+....+..+..++..+|++.++++++++ .+|++++.+|..|..+|++
T Consensus 26 ~~~La~~A~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~gl~~~~~~~~v~-~~Casg~~al~~A~~~I~s 104 (393)
T PRK05790 26 AVELGAIVIKAALERAGVPPEQVDEVIMGQVLQAGAGQNPARQAALKAGLPVEVPALTIN-KVCGSGLKAVALAAQAIRA 104 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCeEEEEEecCCCCCCcHHHHHHHHcCCCCCCceeeec-ccchHHHHHHHHHHHHHHc
Confidence 358999999999999999999999999875 33222344556677788987557899999 5999999999999999999
Q ss_pred cCCCeEEEEEecccc
Q 014606 164 QKNSLALVLSMESVS 178 (421)
Q Consensus 164 g~~~~vLvv~~e~~s 178 (421)
|..++|||+++|.+|
T Consensus 105 G~~d~vLv~G~e~~s 119 (393)
T PRK05790 105 GDADIVVAGGQESMS 119 (393)
T ss_pred CCCCEEEEEeeeccc
Confidence 999999999999754
No 61
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=99.53 E-value=2.3e-13 Score=137.41 Aligned_cols=94 Identities=14% Similarity=0.236 Sum_probs=82.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEec-cCCCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHHc
Q 014606 85 LKTVLFSIVQDLFSKHKINPKSIDILITNC-SVSCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLRV 163 (421)
Q Consensus 85 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s-s~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~~ 163 (421)
..+|+.+|+++||+++|+++++||.||+++ .+....+..+..++..+|++.++++++|+ .+|++++.||..|.++|++
T Consensus 26 ~~eLa~~A~~~aL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~Gl~~~~p~~~V~-~~CaSg~~Al~~A~~~I~s 104 (393)
T PRK08235 26 ATELGGIAIKEALERANVSAEDVEEVIMGTVLQGGQGQIPSRQAARAAGIPWEVQTETVN-KVCASGLRAVTLADQIIRA 104 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCCHHHHHHHHcCCCCCcceeehh-hhhhHHHHHHHHHHHHHHC
Confidence 358999999999999999999999999986 33212345566789999997579999999 5999999999999999999
Q ss_pred cCCCeEEEEEeccccC
Q 014606 164 QKNSLALVLSMESVSS 179 (421)
Q Consensus 164 g~~~~vLvv~~e~~s~ 179 (421)
|..++|||+++|.+|.
T Consensus 105 G~~d~vLvvG~E~ms~ 120 (393)
T PRK08235 105 GDASVIVAGGMESMSN 120 (393)
T ss_pred CCCCEEEEEeeecccc
Confidence 9999999999998875
No 62
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=99.52 E-value=4.6e-13 Score=135.16 Aligned_cols=91 Identities=10% Similarity=0.227 Sum_probs=79.1
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEec-cCCCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHHcc
Q 014606 86 KTVLFSIVQDLFSKHKINPKSIDILITNC-SVSCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLRVQ 164 (421)
Q Consensus 86 ~~la~~Aa~~aL~~ag~~~~~Id~li~~s-s~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~~g 164 (421)
.+|+.+|+++||+++|++++|||.||+++ .+....+..+..++..||++ ..++++++ .+|++++.+|..|..+|++|
T Consensus 22 ~eLa~~A~~~AL~dAgi~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~-~~~~~~v~-~~casg~~al~~A~~~I~sG 99 (385)
T PRK12578 22 QELAWESIKEALNDAGVSQTDIELVVVGSTAYRGIELYPAPIVAEYSGLT-GKVPLRVE-AMCATGLAASLTAYTAVASG 99 (385)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccCChHHHHHHHhCCC-CCCeeEEe-ccCHHHHHHHHHHHHHHHCC
Confidence 47999999999999999999999999876 33222234478899999998 46789999 59999999999999999999
Q ss_pred CCCeEEEEEecccc
Q 014606 165 KNSLALVLSMESVS 178 (421)
Q Consensus 165 ~~~~vLvv~~e~~s 178 (421)
..++|||+++|.+|
T Consensus 100 ~~~~vLvvg~e~~s 113 (385)
T PRK12578 100 LVDMAIAVGVDKMT 113 (385)
T ss_pred CCCEEEEEEEeecc
Confidence 99999999999754
No 63
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=99.52 E-value=2.7e-13 Score=137.48 Aligned_cols=93 Identities=18% Similarity=0.301 Sum_probs=84.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEec-cCCCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHHc
Q 014606 85 LKTVLFSIVQDLFSKHKINPKSIDILITNC-SVSCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLRV 163 (421)
Q Consensus 85 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s-s~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~~ 163 (421)
..+|+.+|+++||+++|++++|||.||+++ .+....|..+..++..+|+++++++++|+ .+|++++.++..|.++|++
T Consensus 26 ~~eLa~~A~~~AL~~agl~~~dID~vv~g~~~~~~~~~~~a~~va~~~Gl~~~~p~~~V~-~~CaSg~~Al~~A~~~I~s 104 (404)
T PRK06205 26 AEELAATVIRALVERTGIDPARIDDVIFGQGYPNGEAPAIGRVAALDAGLPVTVPGMQLD-RRCGSGLQAVITAAMQVQT 104 (404)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCceeehh-hhhhHHHHHHHHHHHHHHc
Confidence 458999999999999999999999999987 55666678888999999998668999999 5999999999999999999
Q ss_pred cCCCeEEEEEecccc
Q 014606 164 QKNSLALVLSMESVS 178 (421)
Q Consensus 164 g~~~~vLvv~~e~~s 178 (421)
|..+.|||+++|.+|
T Consensus 105 G~~d~vLv~G~E~ms 119 (404)
T PRK06205 105 GAADVVIAGGAESMS 119 (404)
T ss_pred CCCCEEEEeeehhhc
Confidence 999999999999876
No 64
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=99.50 E-value=1.1e-12 Score=133.25 Aligned_cols=318 Identities=14% Similarity=0.109 Sum_probs=179.9
Q ss_pred CceEEEEeeeecCCCCCccCHHHHHHHHHHcC-CCChHHHHHHHHHHHHcCCCCceec-CCCCCCCCCCCChH--HHHHH
Q 014606 9 KRVYLVDFICYKAPESLRAPISAFIEHTERSG-TFDSKAVEFQTKVLERSGVGNETCL-PCGTHLLPADGSLN--SSMEE 84 (421)
Q Consensus 9 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~-~~~~~~~~~~~~i~~~~GI~~R~~~-~~~~~~~~~~~s~~--~~~~~ 84 (421)
+.|.|.|+|...|.- .+.+++.+.+.... .+.+ +.+ +...+...+... .++...... .+.. .....
T Consensus 1 ~~v~ItG~g~~~p~g---~~~~~~~~~l~~g~s~~~~-----~~~-~~~~~~~~~~~g~i~~f~~~~~-~~~~~~~~~~~ 70 (407)
T TIGR03150 1 RRVVVTGLGAVTPLG---NGVEEFWENLLAGKSGIGP-----ITR-FDASDLPVKIAGEVKDFDPEDY-IDKKEARRMDR 70 (407)
T ss_pred CcEEEEcceEECCCc---CCHHHHHHHHHcCCCeeEE-----CCc-ccccCCCCcEEEEeCCcChhhc-CCHHHHhhcCH
Confidence 368999999999986 78999998775310 0110 000 000111111100 000000000 0000 01112
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccE----EEEeccC-C-----------------CC--------C-CcHHHHHHHHcCC
Q 014606 85 LKTVLFSIVQDLFSKHKINPKSIDI----LITNCSV-S-----------------CP--------T-PSVAAMVINKFGL 133 (421)
Q Consensus 85 ~~~la~~Aa~~aL~~ag~~~~~Id~----li~~ss~-~-----------------~~--------~-p~~a~~l~~~LGl 133 (421)
..+|+.+|+++||+++|+++++||. ++++++. . .. . ...+.+++..+|+
T Consensus 71 ~~~l~~~aa~~Al~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (407)
T TIGR03150 71 FIQYALAAAKEAVEDSGLDIEEEDAERVGVIIGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQISIRYGA 150 (407)
T ss_pred HHHHHHHHHHHHHHhcCCCcccCCccceEEEEecCCCchHHHHHHHHHHHhcCccccChhhhhcccccHHHHHHHHHhCC
Confidence 3579999999999999999988886 5555421 1 00 1 1246679999999
Q ss_pred CCCceeeeeeCCcchHHHHHHHHHHHHHHccCCCeEEEEEeccccCC-----------Cc--c--------CCCccchhh
Q 014606 134 KSNVRSFHLSGMGCSAGILSISLAKDLLRVQKNSLALVLSMESVSSN-----------GY--Q--------GKVKYMQLA 192 (421)
Q Consensus 134 ~~~~~~~~i~~~~C~g~~~al~~A~~li~~g~~~~vLvv~~e~~s~~-----------~~--~--------~~d~~~~~~ 192 (421)
+ .+.+.+. .+|++++.||..|..+|++|..+.+||+++|..... +. . +-|.. -.
T Consensus 151 ~--g~~~~v~-~acaSg~~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~--~~ 225 (407)
T TIGR03150 151 K--GPNHAVV-TACATGTHAIGDAFRLIQRGDADVMIAGGAEAAITPLGIAGFAAMKALSTRNDDPEKASRPFDKD--RD 225 (407)
T ss_pred C--Ccccccc-cHHHHHHHHHHHHHHHHhcCCCCEEEEecccCcCCHHHHHHHHHhCcccCCCCCCCcCCCCCcCC--CC
Confidence 5 6789999 599999999999999999999999999999963221 00 0 00110 13
Q ss_pred hcccccCcEEEEEecCCccccccceeeee-eeeeeecCCCccceeeeeeccCCCcceeeeChhhhHHHHHHHHHHHHHhh
Q 014606 193 NCLFRMGGAGILLSNKKEDRQRAKYELQH-LVRTHLGSKDTAYKCVFQEHDDEGFTGVSLSRSILQVAGEALKANMATLA 271 (421)
Q Consensus 193 ~~lfGDGAaA~lL~~~~~~~~~~~~~~~~-~~~~~~~t~~~~~~~~~~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~~~~ 271 (421)
.+++||||+|+||++.+.... .+..+.. +...-...++.. +..+ . +. ..
T Consensus 226 g~~~gEGAaalvL~~~~~A~~-~g~~i~a~i~g~~~~~d~~~---~~~~-----------~---~~--~~---------- 275 (407)
T TIGR03150 226 GFVMGEGAGVLVLEELEHAKA-RGAKIYAEIVGYGMSGDAYH---ITAP-----------A---PE--GE---------- 275 (407)
T ss_pred cEEEeceEEEEEEeeHHHHHH-CCCeEEEEEEEEEECCCCCC---CCCC-----------C---CC--cH----------
Confidence 578999999999998653211 0111111 111111111100 0000 0 00 00
Q ss_pred hhccchhHHHHHHHHhhhhhcCCCCCCCCCCCCCccccccEEEecCCCH-----HHHHHHHHHCCCChhhhHHHHHHHhc
Q 014606 272 AMVLPYSELVWYAVSVTWKKIWPPGRKRGPYIPDFRKAFEHFCVHAGGK-----AVIDAIKENLKLKDRDVEASKTTLYR 346 (421)
Q Consensus 272 ~~~~~~~~~~~~~~~~i~~~l~~~gl~~~~~~~~~~~did~~i~Hq~~~-----~~~~~i~~~lgl~~~~~~~s~~~l~~ 346 (421)
...+.+.++|.++|++ ++|||++.+|-.+- .-...+.+.++-...++.- -..-..
T Consensus 276 -----------~~~~ai~~Al~~Agi~--------~~dId~ve~h~tgt~~~D~~E~~a~~~~~~~~~~~~~v-~s~k~~ 335 (407)
T TIGR03150 276 -----------GAARAMRAALKDAGIN--------PEDVDYINAHGTSTPLGDKAETKAIKRVFGDHAYKLAV-SSTKSM 335 (407)
T ss_pred -----------HHHHHHHHHHHHcCCC--------HhHCCEEeCcCCCCCCCCHHHHHHHHHHhccCCCCCce-eCCcch
Confidence 0112344667778998 49999999998766 3344566666653333320 012234
Q ss_pred cCCCccchHHHHHHHH---HHcCCCC------------------------CCCeEEEEeecccccccceeee
Q 014606 347 FGNTSSSSVWYELSYL---EAKGKVK------------------------KGDKIWQLAFGSGFKCNSAVWK 391 (421)
Q Consensus 347 ~Gn~~sasi~i~L~~~---~~~g~~~------------------------~Gd~vll~~~G~G~~~~~~llr 391 (421)
+||+.+|+-.+.+..+ ++.+.+. +-.+++.-+||.|.+-.+++|+
T Consensus 336 ~Gh~~~AsG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~s~gfgG~n~~~vl~ 407 (407)
T TIGR03150 336 TGHLLGAAGAIEAIFTVLAIRDGVVPPTINLDNPDPECDLDYVPNEARERKIDYALSNSFGFGGHNASLVFK 407 (407)
T ss_pred hchhHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccccCCCCccCCcCEEEEecccCCCceEEEEeC
Confidence 6999888776665543 4443221 1245677888888777777763
No 65
>PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways. The FAS I pathway, which generally only produces palmitate, is found in eukaryotes and is performed either by a single polypeptide which contains all the reaction centres needed to form a fatty acid, or by two polypeptides which interact to form a multifunctional complex. The FAS II pathway, which is capable of producing many different fatty acids, is found in mitochondria, bacteria, plants and parasites, and is performed by many distinct proteins, each of which catalyses a single step within the pathway. The large diversity of products generated by this pathway is possible because the acyl carrier protein (ACP) intermediates are diffusible entities that can be diverted into other biosynthetic pathways []. 3-Oxoacyl-[acyl carrier protein (ACP)] synthase III catalyses the first condensation step within the FAS II pathway, using acetyl-CoA as the primer and malonyl-ACP as the acceptor, as shown below. Acyl-[ACP] + malonyl-[ACP] = 3-oxoacyl-[ACP] + CO(2) + [ACP] The oxoacyl-ACP formed by this reaction subsequently enters the elongation cycle, where the acyl chain is progressively lengthened by the combined activities of several enzymes. The enzymes studied so far are homodimers, where each monomer consists of two domains (N-terminal and C-terminal) which are similar in structure, but not in sequence [, ]. This entry represents a conserved region within the N-terminal domain.; GO: 0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity, 0006633 fatty acid biosynthetic process; PDB: 1ZOW_C 1UB7_B 3IL7_A 3IL3_A 2X3E_B 4DFE_C 3LED_B 3ROW_B 3S23_A 3S1Z_A ....
Probab=99.50 E-value=4.6e-14 Score=110.10 Aligned_cols=66 Identities=21% Similarity=0.363 Sum_probs=55.5
Q ss_pred eeeeCCcchHHHHHHHHHHHHHHccCCCeEEEEEeccccCCCccCCCccchhhhcccccCcEEEEEecCCc
Q 014606 140 FHLSGMGCSAGILSISLAKDLLRVQKNSLALVLSMESVSSNGYQGKVKYMQLANCLFRMGGAGILLSNKKE 210 (421)
Q Consensus 140 ~~i~~~~C~g~~~al~~A~~li~~g~~~~vLvv~~e~~s~~~~~~~d~~~~~~~~lfGDGAaA~lL~~~~~ 210 (421)
|||+ ++|+|++.||++|.++|+++..++||||++|..+..+ ++.++. ...+|||||+|+||++++.
T Consensus 1 fDi~-~~C~g~~~al~~A~~~i~~g~~~~~Lvv~~d~~s~~~-~~~~~~---~~~~~gDgAaA~vl~~~~~ 66 (80)
T PF08545_consen 1 FDIN-QACAGFLYALDVAAALIASGRAKNALVVGGDRLSRIV-DRTDRQ---TAFIFGDGAAAVVLSRDEE 66 (80)
T ss_dssp EEEE--GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEEGGGGS-HTTHHH---HHTTB-EEEEEEEEEEESS
T ss_pred Cccc-ccchHHHHHHHHHHHHHhhccCCEEEEEeeccccccc-cccccC---cceeecchheEEEEEecCC
Confidence 7999 5999999999999999999999999999999998855 334444 5779999999999999743
No 66
>PRK12404 stage V sporulation protein AD; Provisional
Probab=99.49 E-value=1.1e-12 Score=125.47 Aligned_cols=238 Identities=13% Similarity=0.139 Sum_probs=151.2
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHH
Q 014606 81 SMEELKTVLFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDL 160 (421)
Q Consensus 81 ~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~l 160 (421)
+++.-.+|+.+|+++||+++|++++|||.++.++..+...|+ ..+++.||++ .+++++ +|+++..||.+|..+
T Consensus 50 wEkAE~~L~~EA~~~AL~kAGI~~~DID~i~vGdL~nQ~ips--sfvar~LGIP----~~gV~g-ACSTg~eAL~lAa~~ 122 (334)
T PRK12404 50 YEKAERKLLEEACSRAIEKAKLRKEDIQFFLAGDLMNQITPT--SFAARTLGIP----YLGLFG-ACSTSMEGLALAALI 122 (334)
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCcCcH--HHHHHHhCCC----ccceee-cCHHHHHHHHHHHHH
Confidence 334456799999999999999999999999998755666665 4999999965 499995 999999999999999
Q ss_pred HHccCCCeEEEEEeccccC---CCccC----CCccchhhhcccccCcEEEEEecCCccccccceeeeeeeeeeecCCCcc
Q 014606 161 LRVQKNSLALVLSMESVSS---NGYQG----KVKYMQLANCLFRMGGAGILLSNKKEDRQRAKYELQHLVRTHLGSKDTA 233 (421)
Q Consensus 161 i~~g~~~~vLvv~~e~~s~---~~~~~----~d~~~~~~~~lfGDGAaA~lL~~~~~~~~~~~~~~~~~~~~~~~t~~~~ 233 (421)
+++|.+++||++++-..+. .|+.+ ..|. .+..+--=||+|+||++.... .++.++ |-|+-
T Consensus 123 VaSG~Ad~VLavtsSH~~~aErqfR~P~eyG~Qrp--~taqwTvTgaga~~l~~~~~~-----~~i~~~------T~Gkv 189 (334)
T PRK12404 123 VNSGGAKYVLTGASSHNAAVEKQFRYPTEYGGQKP--PTAQWTVTGAGAAILSKTGDG-----PRVTSA------TIGRV 189 (334)
T ss_pred HHcCCCCEEEEEeCcccchhhhhccCcccccCcCC--CcccEEEEceEEEEEecCCCC-----ceEEEE------EEEEE
Confidence 9999999999999766442 22211 1121 134445568999999876433 222221 11111
Q ss_pred ceeeeeeccCCCcceeeeChhhhHHHHHHHHHHHHHhhhhccchhHHHHHHHHhhhhhcCCCCCCCCCCCCCccccccEE
Q 014606 234 YKCVFQEHDDEGFTGVSLSRSILQVAGEALKANMATLAAMVLPYSELVWYAVSVTWKKIWPPGRKRGPYIPDFRKAFEHF 313 (421)
Q Consensus 234 ~~~~~~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~gl~~~~~~~~~~~did~~ 313 (421)
.+ + |.. |--+| +. ..--.++.++.+.+++.|.++ +|.|.+
T Consensus 190 ~D-~----------g~~---d~~nM-Ga-----------------aMAPAA~dti~~h~~d~~~~~--------~~yDlI 229 (334)
T PRK12404 190 VD-M----------GLT---DPFNM-GG-----------------AMAPAAVDTIEAHLRDRQIDA--------SYYDLI 229 (334)
T ss_pred Ee-c----------CCC---Ccccc-hh-----------------hhhHHHHHHHHHHHHHhCCCh--------hhccEE
Confidence 11 0 010 00000 00 001234556666777778884 899999
Q ss_pred EecC---CCHHHHHHHHHHCCCCh-h-hhHHHHHHH---------hccCCCccchHHHHHH-HHHH---cCCCCCCCeEE
Q 014606 314 CVHA---GGKAVIDAIKENLKLKD-R-DVEASKTTL---------YRFGNTSSSSVWYELS-YLEA---KGKVKKGDKIW 375 (421)
Q Consensus 314 i~Hq---~~~~~~~~i~~~lgl~~-~-~~~~s~~~l---------~~~Gn~~sasi~i~L~-~~~~---~g~~~~Gd~vl 375 (421)
+.-- .+++++..+.++-|++. + +.. +.- -.-|-.|++..-+.+. +.++ +|++ .+||
T Consensus 230 ~TGDLg~vG~~i~~~ll~~~g~~~~~~~~~---DCG~~iyd~~~~~~aGgSGcgcsA~v~~g~~~~~~~~g~~---~rvL 303 (334)
T PRK12404 230 VTGDLGHVGREIAKDLLHKHGVKVPEEQFQ---DCGLLIYREGQPVIAGASGPGCSATVTYGHLLNRMKRGEL---KRIL 303 (334)
T ss_pred EEcchHHHHHHHHHHHHHHcCCCCCccccc---ccCeEEecCCCcccCCCcccchHHHHHHHHHHHHHhcCCc---eEEE
Confidence 9854 57788889888877764 3 221 110 0123344433333333 3333 4544 5799
Q ss_pred EEeeccccc
Q 014606 376 QLAFGSGFK 384 (421)
Q Consensus 376 l~~~G~G~~ 384 (421)
+++-|+=++
T Consensus 304 ~v~TGALlS 312 (334)
T PRK12404 304 VVATGALLS 312 (334)
T ss_pred EEEchhhcC
Confidence 998887443
No 67
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=99.47 E-value=1.2e-12 Score=132.51 Aligned_cols=94 Identities=17% Similarity=0.243 Sum_probs=79.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEec-cCCCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHHc
Q 014606 85 LKTVLFSIVQDLFSKHKINPKSIDILITNC-SVSCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLRV 163 (421)
Q Consensus 85 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s-s~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~~ 163 (421)
+.+|+.+|++++|+++|+++++||.+|+++ .++......+...+..+|++.++++++|+ .+|++++.|+..|..+|++
T Consensus 31 ~~eL~~~a~~~aL~~Agi~~~dID~vi~G~~~~~~~~~~~~~~~~l~ag~~~~~p~~~V~-~aCaSG~~Av~~A~~~I~s 109 (397)
T PRK06954 31 APQLGAAAIAAAVERAGLKPEQIDEVVMGCVLPAGQGQAPARQAALGAGLPLSVGCTTVN-KMCGSGMRAAMFAHDMLVA 109 (397)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccchHHHHHHHHcCCCCCCccEeecc-ccchHHHHHHHHHHHHHHC
Confidence 458999999999999999999999999986 44333333444455567777569999999 5999999999999999999
Q ss_pred cCCCeEEEEEeccccC
Q 014606 164 QKNSLALVLSMESVSS 179 (421)
Q Consensus 164 g~~~~vLvv~~e~~s~ 179 (421)
|..+++|++++|.+|.
T Consensus 110 G~~d~vLv~G~E~ms~ 125 (397)
T PRK06954 110 GSVDVIVAGGMESMTN 125 (397)
T ss_pred CCCCEEEEEeeeccCC
Confidence 9999999999999873
No 68
>PRK06059 lipid-transfer protein; Provisional
Probab=99.46 E-value=4.3e-12 Score=128.74 Aligned_cols=91 Identities=10% Similarity=0.145 Sum_probs=80.2
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEec-cC-CCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHHc
Q 014606 86 KTVLFSIVQDLFSKHKINPKSIDILITNC-SV-SCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLRV 163 (421)
Q Consensus 86 ~~la~~Aa~~aL~~ag~~~~~Id~li~~s-s~-~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~~ 163 (421)
.+|+++|+++||+++|+++++||.||+++ .+ ++..+..+..++..||++ .++.++++ .+|++++.+|..|..+|++
T Consensus 24 ~~La~~A~~~Al~dAgl~~~dId~vi~~~~~~~~~~~~~~a~~va~~lG~~-~~~~~~v~-~~Casg~~al~~A~~~I~s 101 (399)
T PRK06059 24 VEYGVVAARAALADAGLDWRDVQLVVGADTIRNGYPGFVAGATFAQALGWN-GAPVSSSY-AACASGSQALQSARAQILA 101 (399)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCccCCccHHHHHHHHhCCC-CCceeccc-chhHHHHHHHHHHHHHHHC
Confidence 47999999999999999999999999865 33 333455678999999997 58899999 5999999999999999999
Q ss_pred cCCCeEEEEEecccc
Q 014606 164 QKNSLALVLSMESVS 178 (421)
Q Consensus 164 g~~~~vLvv~~e~~s 178 (421)
|..++|||+++|.++
T Consensus 102 G~~~~vLvvg~e~~s 116 (399)
T PRK06059 102 GLCDVALVVGADTTP 116 (399)
T ss_pred CCCCEEEEEEEcccC
Confidence 999999999999765
No 69
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=99.45 E-value=2.8e-12 Score=129.42 Aligned_cols=94 Identities=19% Similarity=0.220 Sum_probs=82.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEec-cCCCC-CCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHH
Q 014606 85 LKTVLFSIVQDLFSKHKINPKSIDILITNC-SVSCP-TPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLR 162 (421)
Q Consensus 85 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s-s~~~~-~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~ 162 (421)
..+|+.+|++++|+++|+.+++||.+|+++ .++.. .+..+..++..+|+++.++++.|+ .+|++++.|+..|..+|+
T Consensus 27 ~~eLa~~A~~~AL~~ag~~~~dID~vi~g~~~~~~~~g~~~a~~~~~~lGl~~~~p~~~V~-~aCaSG~~Al~~A~~~I~ 105 (391)
T PRK07661 27 PDDLGALVVKETLKRAGNYEGPIDDLIIGCAMPEAEQGLNMARNIGALAGLPYTVPAITIN-RYCSSGLQSIAYGAERIM 105 (391)
T ss_pred HHHHHHHHHHHHHHhcCCChhHCCEEEEEeccccccccchHHHHHHHHcCCCCCcceeehh-hhhhHHHHHHHHHHHHHH
Confidence 358999999999999998889999999985 44433 366778899999998559999999 599999999999999999
Q ss_pred ccCCCeEEEEEeccccC
Q 014606 163 VQKNSLALVLSMESVSS 179 (421)
Q Consensus 163 ~g~~~~vLvv~~e~~s~ 179 (421)
+|..+.+||+++|.+|.
T Consensus 106 sG~~d~vLv~G~E~ms~ 122 (391)
T PRK07661 106 LGHSEAVIAGGAESMSL 122 (391)
T ss_pred cCCCCEEEEEEEeeccc
Confidence 99999999999998764
No 70
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=99.45 E-value=2.5e-12 Score=130.12 Aligned_cols=91 Identities=14% Similarity=0.289 Sum_probs=75.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEec-cCCCCCC---cHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHH
Q 014606 85 LKTVLFSIVQDLFSKHKINPKSIDILITNC-SVSCPTP---SVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDL 160 (421)
Q Consensus 85 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s-s~~~~~p---~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~l 160 (421)
+.+|+.+|+++||+++|++++|||.+|+++ .++...| .....+...++ .+.++++|+ .+|++++.++..|..+
T Consensus 32 ~~~L~~~a~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~l~a~~~--~~~p~~~V~-~~CaSg~~ai~~A~~~ 108 (394)
T PRK06445 32 PEELAAMLINRLIEKTGIKPEEIDDIITGCALQVGENWLYGGRHPIFLARLP--YNIPAMAVD-RQCASSLTTVSIGAME 108 (394)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCeeEEEeecCCCcccccHHHHHHHHcCCC--CCCcchhhh-hhhHHHHHHHHHHHHH
Confidence 358999999999999999999999999986 4433222 33334455555 468999999 5999999999999999
Q ss_pred HHccCCCeEEEEEecccc
Q 014606 161 LRVQKNSLALVLSMESVS 178 (421)
Q Consensus 161 i~~g~~~~vLvv~~e~~s 178 (421)
|++|..++|||+++|.+|
T Consensus 109 I~sG~~d~vLv~G~e~ms 126 (394)
T PRK06445 109 IATGMADIVIAGGVEHMT 126 (394)
T ss_pred HHcCCCCEEEEeeecccc
Confidence 999999999999999765
No 71
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=99.45 E-value=1.2e-11 Score=124.75 Aligned_cols=90 Identities=9% Similarity=0.068 Sum_probs=79.6
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCC--CCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHHc
Q 014606 86 KTVLFSIVQDLFSKHKINPKSIDILITNCSVSCP--TPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLRV 163 (421)
Q Consensus 86 ~~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~--~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~~ 163 (421)
.+|+.+|+++||+++|++++|||.+|+++.++.. .+..+..+++.||+. ..+++++.+ +|+++..+|..|..+|++
T Consensus 30 ~~L~~~A~~~Al~dagl~~~dID~~i~~~~~~~~~~~~~~a~~l~~~lG~~-~~~~~~V~~-~gasG~~al~~A~~~I~s 107 (392)
T PRK06065 30 QELAWEAASKALDEAGLELKDIDCVVIGSAPDAFDGVHMKGEYLSHGSGGI-RKPVSRVYV-GGATGVMTAIAGWYHVAS 107 (392)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCcccccccHHHHHHHHcCCC-CCCeEEEec-CchhHHHHHHHHHHHHhC
Confidence 5799999999999999999999999987644332 456788899999997 589999994 999999999999999999
Q ss_pred cCCCeEEEEEeccc
Q 014606 164 QKNSLALVLSMESV 177 (421)
Q Consensus 164 g~~~~vLvv~~e~~ 177 (421)
|..++||||++|++
T Consensus 108 G~ad~vLVvg~e~~ 121 (392)
T PRK06065 108 GLCQKVLAVAEEKM 121 (392)
T ss_pred CCCCEEEEEEeecc
Confidence 99999999999974
No 72
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.44 E-value=6.4e-12 Score=128.00 Aligned_cols=319 Identities=13% Similarity=0.072 Sum_probs=182.5
Q ss_pred CceEEEEeeeecCCCCCccCHHHHHHHHHHcC-CCChHHHHHHHHHHHHcCCCCceec-CCCCCCCCCCCChH--HHHHH
Q 014606 9 KRVYLVDFICYKAPESLRAPISAFIEHTERSG-TFDSKAVEFQTKVLERSGVGNETCL-PCGTHLLPADGSLN--SSMEE 84 (421)
Q Consensus 9 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~-~~~~~~~~~~~~i~~~~GI~~R~~~-~~~~~~~~~~~s~~--~~~~~ 84 (421)
+.|.|.|+|...|.- .+.+++.+.+.... .+.+ +.+ +...+...+... .++...... .+.. .....
T Consensus 2 ~~v~ItG~g~~~p~g---~~~~~~w~~l~~g~~~~~~-----~~~-~~~~~~~~~~~g~i~~f~~~~~-~~~~~~~~~~~ 71 (411)
T PRK07314 2 RRVVVTGLGAVSPLG---NDVESTWKNLLAGKSGIGP-----ITH-FDTSDLAVKIAGEVKDFNPDDY-MSRKEARRMDR 71 (411)
T ss_pred CcEEEEcceEECCCc---CCHHHHHHHHHhCCCcEEE-----CCc-ccccCCCccEEEEeCCcChhhc-CCHHHhhcCCH
Confidence 579999999999986 79999998775310 0100 000 000111111110 000000000 0000 00112
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcc----EEEEeccCC----------------------C----CC-CcHHHHHHHHcCC
Q 014606 85 LKTVLFSIVQDLFSKHKINPKSID----ILITNCSVS----------------------C----PT-PSVAAMVINKFGL 133 (421)
Q Consensus 85 ~~~la~~Aa~~aL~~ag~~~~~Id----~li~~ss~~----------------------~----~~-p~~a~~l~~~LGl 133 (421)
...|+..|+++||+++|++++++| .++++++.. + .. ...+.+++..+|+
T Consensus 72 ~~~l~~~aa~~Al~dAGl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 151 (411)
T PRK07314 72 FIQYGIAAAKQAVEDAGLEITEENADRIGVIIGSGIGGLETIEEQHITLLEKGPRRVSPFFVPMAIINMAAGHVSIRYGA 151 (411)
T ss_pred HHHHHHHHHHHHHHHcCCCcccCCcccEEEEEecCcCChHHHHHHHHHHHhcCccccChhhhhhhcchHHHHHHHHHhCC
Confidence 357999999999999999998888 466654211 0 11 1256789999999
Q ss_pred CCCceeeeeeCCcchHHHHHHHHHHHHHHccCCCeEEEEEeccccCC-----Cc----------------cCCCccchhh
Q 014606 134 KSNVRSFHLSGMGCSAGILSISLAKDLLRVQKNSLALVLSMESVSSN-----GY----------------QGKVKYMQLA 192 (421)
Q Consensus 134 ~~~~~~~~i~~~~C~g~~~al~~A~~li~~g~~~~vLvv~~e~~s~~-----~~----------------~~~d~~~~~~ 192 (421)
+ .+.+.+. .+|++++.||..|..+|++|..+.|||.++|..+.. +. .+-|.+ -.
T Consensus 152 ~--Gp~~tv~-~acaSgl~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~~--~d 226 (411)
T PRK07314 152 K--GPNHSIV-TACATGAHAIGDAARLIAYGDADVMVAGGAEAAITPLGIAGFAAARALSTRNDDPERASRPFDKD--RD 226 (411)
T ss_pred C--Cccccch-hhhHHHHHHHHHHHHHHhcCCCCEEEEeeecccCCHHHHHHHHHhccccCCCCCCCcCcCCCcCC--CC
Confidence 6 5788899 599999999999999999999999999999864321 00 000110 03
Q ss_pred hcccccCcEEEEEecCCccccccceeeee-eeeeeecCCCccceeeeeeccCCCcceeeeChhhhHHHHHHHHHHHHHhh
Q 014606 193 NCLFRMGGAGILLSNKKEDRQRAKYELQH-LVRTHLGSKDTAYKCVFQEHDDEGFTGVSLSRSILQVAGEALKANMATLA 271 (421)
Q Consensus 193 ~~lfGDGAaA~lL~~~~~~~~~~~~~~~~-~~~~~~~t~~~~~~~~~~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~~~~ 271 (421)
.+++||||+|+||++.+..... +..+.. +.......++.. +. .|.....
T Consensus 227 G~~~geGAaavvL~~~~~A~~~-g~~~~a~I~g~~~~~d~~~-----------------~~--~~~~~~~---------- 276 (411)
T PRK07314 227 GFVMGEGAGILVLEELEHAKAR-GAKIYAEVVGYGMTGDAYH-----------------MT--APAPDGE---------- 276 (411)
T ss_pred CEeEEceEEEEEEeeHHHHHHC-CCeEEEEEEEEEEcCCCCC-----------------CC--CCCCCcH----------
Confidence 6789999999999986432110 111111 111111111100 00 0000000
Q ss_pred hhccchhHHHHHHHHhhhhhcCCCCCCCCCCCCCccccccEEEecCCCHHHH-----HHHHHHCCCChhhhHHHHHHHhc
Q 014606 272 AMVLPYSELVWYAVSVTWKKIWPPGRKRGPYIPDFRKAFEHFCVHAGGKAVI-----DAIKENLKLKDRDVEASKTTLYR 346 (421)
Q Consensus 272 ~~~~~~~~~~~~~~~~i~~~l~~~gl~~~~~~~~~~~did~~i~Hq~~~~~~-----~~i~~~lgl~~~~~~~s~~~l~~ 346 (421)
.....+.+++.++|++ ++|||++..|-.+-... +.+.+.++....++.- -..-..
T Consensus 277 -----------~~~~a~~~Al~~agi~--------~~dId~v~~hgtgt~~~d~~E~~al~~~~~~~~~~~~v-~s~k~~ 336 (411)
T PRK07314 277 -----------GAARAMKLALKDAGIN--------PEDIDYINAHGTSTPAGDKAETQAIKRVFGEHAYKVAV-SSTKSM 336 (411)
T ss_pred -----------HHHHHHHHHHHHcCCC--------HHHCCEEEccccCCccccHHHHHHHHHHhcccCCCCee-ECccch
Confidence 0112344667788998 49999999998765333 3445556643333320 012244
Q ss_pred cCCCccchHHHHHHH---HHHcCCCCC------------------------CCeEEEEeecccccccceeeee
Q 014606 347 FGNTSSSSVWYELSY---LEAKGKVKK------------------------GDKIWQLAFGSGFKCNSAVWKC 392 (421)
Q Consensus 347 ~Gn~~sasi~i~L~~---~~~~g~~~~------------------------Gd~vll~~~G~G~~~~~~llr~ 392 (421)
+||+.+|+-.+.+.. +++.|.+.| -++++.-+||-|..-++++|+.
T Consensus 337 ~Gh~~~AsG~~~~i~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~s~gfGG~n~~~vl~~ 409 (411)
T PRK07314 337 TGHLLGAAGAVEAIFSVLAIRDQVIPPTINLDNPDEECDLDYVPNEARERKIDYALSNSFGFGGTNASLVFKR 409 (411)
T ss_pred hchhHHHHHHHHHHHHHHHHhCCCcCCCCCCCCCCCCCCccccCCcccCCCCCEEEEecccCCCceEEEEEec
Confidence 799988876655544 344443321 2456778899888888888864
No 73
>PLN02287 3-ketoacyl-CoA thiolase
Probab=99.43 E-value=8.2e-12 Score=127.85 Aligned_cols=94 Identities=13% Similarity=0.236 Sum_probs=80.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEec-cCCCCCCc-HHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHH
Q 014606 85 LKTVLFSIVQDLFSKHKINPKSIDILITNC-SVSCPTPS-VAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLR 162 (421)
Q Consensus 85 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s-s~~~~~p~-~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~ 162 (421)
..+|+.+|++++|+++|++++|||.||+++ .+....+. .+..++..+|+++..++++++ .+|++++.++..|..+|+
T Consensus 71 ~~eLa~eA~~~AL~dAgl~~~dID~vv~G~~~~~~~~~~~~~r~~a~~~Gl~~~~pa~~V~-~~CaSG~~Ai~~Aa~~I~ 149 (452)
T PLN02287 71 PDDLLAPVLKAVVEKTGLNPSEVGDIVVGTVLAPGSQRANECRMAAFYAGFPETVPVRTVN-RQCSSGLQAVADVAAAIK 149 (452)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCcccccchHHHHHHHHCCCCCCcceEEEe-ccCchHHHHHHHHHHHHH
Confidence 468999999999999999999999999876 34444443 445677888998568999999 599999999999999999
Q ss_pred ccCCCeEEEEEeccccC
Q 014606 163 VQKNSLALVLSMESVSS 179 (421)
Q Consensus 163 ~g~~~~vLvv~~e~~s~ 179 (421)
+|..+.|||++.|.+|.
T Consensus 150 sG~~dvvLv~GvE~mS~ 166 (452)
T PLN02287 150 AGFYDIGIGAGVESMTT 166 (452)
T ss_pred cCCCCeEEEEeEEecCC
Confidence 99999999999997653
No 74
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=99.41 E-value=1e-11 Score=125.04 Aligned_cols=94 Identities=18% Similarity=0.221 Sum_probs=85.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEecc-C-CCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHH
Q 014606 85 LKTVLFSIVQDLFSKHKINPKSIDILITNCS-V-SCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLR 162 (421)
Q Consensus 85 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~ss-~-~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~ 162 (421)
+.+|+..+++.+|++++++|++||.||+.+. + ....+..+.+.+-..|++.+++++.|+ ..|+|++.|+.+|.+.|+
T Consensus 29 ~~~L~~~~~~~~l~r~~i~~~~id~vi~G~~~~~g~~g~n~aR~~al~aglp~~vp~~tvn-r~C~Sgl~ai~~aa~~I~ 107 (417)
T PRK06025 29 PQHLAATVLKALAERNGLNTADVDDIIWSTSSQRGKQGGDLGRMAALDAGYDIKASGVTLD-RFCGGGITSVNLAAAQIM 107 (417)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHCCEEEEEcCCCcCcccCcHHHHHHHhCCCCCCCCeeeec-cccchHHHHHHHHHHHHH
Confidence 4589999999999999999999999999863 3 222477899999999999899999999 699999999999999999
Q ss_pred ccCCCeEEEEEeccccC
Q 014606 163 VQKNSLALVLSMESVSS 179 (421)
Q Consensus 163 ~g~~~~vLvv~~e~~s~ 179 (421)
+|..+.+|+.+.|.+|+
T Consensus 108 ~G~~~~~laGG~EsmS~ 124 (417)
T PRK06025 108 SGMEDLVIAGGTEMMSY 124 (417)
T ss_pred cCCCCEEEEeeeeccCC
Confidence 99999999999999985
No 75
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=99.40 E-value=1.4e-11 Score=125.38 Aligned_cols=248 Identities=13% Similarity=0.138 Sum_probs=150.1
Q ss_pred HHHHHHHHHHHHHHhCCCC---CCCccEEEEecc----------------CCCCCC---------cHHHHHHHHcCCCCC
Q 014606 85 LKTVLFSIVQDLFSKHKIN---PKSIDILITNCS----------------VSCPTP---------SVAAMVINKFGLKSN 136 (421)
Q Consensus 85 ~~~la~~Aa~~aL~~ag~~---~~~Id~li~~ss----------------~~~~~p---------~~a~~l~~~LGl~~~ 136 (421)
...|+..|+++||+++|++ +++|+.++.++. +.+..| ..+.+|+..||++
T Consensus 80 ~~~lal~Aa~eAl~dAgl~~~~~~riGvivG~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~-- 157 (410)
T PRK07103 80 SAQAALAAAREAWRDAALGPVDPDRIGLVVGGSNLQQREQALVHETYRDRPAFLRPSYGLSFMDTDLVGLCSEQFGIR-- 157 (410)
T ss_pred HHHHHHHHHHHHHHhcCcCCCCCCCEEEEEccCCcchHHHHHHHHHhccCccccChhhhhhhcchHHHHHHHHHhCCC--
Confidence 4579999999999999986 456665554332 111112 2567888999996
Q ss_pred ceeeeeeCCcchHHHHHHHHHHHHHHccCCCeEEEEEeccc-cCC-----------------------CccC-CCccchh
Q 014606 137 VRSFHLSGMGCSAGILSISLAKDLLRVQKNSLALVLSMESV-SSN-----------------------GYQG-KVKYMQL 191 (421)
Q Consensus 137 ~~~~~i~~~~C~g~~~al~~A~~li~~g~~~~vLvv~~e~~-s~~-----------------------~~~~-~d~~~~~ 191 (421)
.+++.+. .+|++++.||..|..+|++|..+.|||++++.. +.. ..+. .++
T Consensus 158 G~~~tv~-~acas~~~Al~~A~~~I~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~rPfd~~~---- 232 (410)
T PRK07103 158 GEGFTVG-GASASGQLAVIQAARLVQSGSVDACIAVGALMDLSYWECQALRSLGAMGSDRFADEPEAACRPFDQDR---- 232 (410)
T ss_pred CCccccc-chhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHccccccCccCCCcccCcCCCCCCC----
Confidence 5788899 599999999999999999999999999998631 110 0000 122
Q ss_pred hhcccccCcEEEEEecCCccccccceeee-eeeeeeecCCCccceeeeeeccCCCcceeeeChhhhHHHHHHHHHHHHHh
Q 014606 192 ANCLFRMGGAGILLSNKKEDRQRAKYELQ-HLVRTHLGSKDTAYKCVFQEHDDEGFTGVSLSRSILQVAGEALKANMATL 270 (421)
Q Consensus 192 ~~~lfGDGAaA~lL~~~~~~~~~~~~~~~-~~~~~~~~t~~~~~~~~~~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~~~ 270 (421)
..+++||||+|+||++.+..... +.++. .+......+++.. .. .|...+
T Consensus 233 dG~v~gEGaaalvLe~~~~A~~~-g~~i~a~I~g~~~~~d~~~-----------------~~--~p~~~~---------- 282 (410)
T PRK07103 233 DGFIYGEACGAVVLESAESARRR-GARPYAKLLGWSMRLDANR-----------------GP--DPSLEG---------- 282 (410)
T ss_pred CCeeEeeeEEEEEEccHHHHHHC-CCceEEEEEEEEEecCCCC-----------------CC--CCCHHH----------
Confidence 36789999999999986532110 11110 1222222222210 00 010000
Q ss_pred hhhccchhHHHHHHHHhhhhhcCCCCCCCCCCCCCccccccEEEecCCCHHHHHHHHH-H-CCCChhhhHHHHHHHhccC
Q 014606 271 AAMVLPYSELVWYAVSVTWKKIWPPGRKRGPYIPDFRKAFEHFCVHAGGKAVIDAIKE-N-LKLKDRDVEASKTTLYRFG 348 (421)
Q Consensus 271 ~~~~~~~~~~~~~~~~~i~~~l~~~gl~~~~~~~~~~~did~~i~Hq~~~~~~~~i~~-~-lgl~~~~~~~s~~~l~~~G 348 (421)
..+.+.++|+++|+++ +|||++..|-.+-..-+.++. . ++.....+.- -.+-..+|
T Consensus 283 -------------~~~a~~~Al~~Agi~~--------~dId~v~~hgtgt~~~D~~E~~al~~~~~~~~~v-~s~k~~~G 340 (410)
T PRK07103 283 -------------EMRVIRAALRRAGLGP--------EDIDYVNPHGTGSPLGDETELAALFASGLAHAWI-NATKSLTG 340 (410)
T ss_pred -------------HHHHHHHHHHHcCCCH--------HHCCEEEccCCCCCCCCHHHHHHHhcCCCCCCeE-ECCCcccc
Confidence 0123446677789984 999999999876654333211 1 2221111210 12224579
Q ss_pred CCccchHHHHHHHH---HHcCCCC-----------------------CCCeEEEEeecccccccceeee
Q 014606 349 NTSSSSVWYELSYL---EAKGKVK-----------------------KGDKIWQLAFGSGFKCNSAVWK 391 (421)
Q Consensus 349 n~~sasi~i~L~~~---~~~g~~~-----------------------~Gd~vll~~~G~G~~~~~~llr 391 (421)
|+.+|+-.+.|... +++|.+. +-..++.-+||.|..-.+++|+
T Consensus 341 h~~~AsG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~s~gfGG~n~~~vl~ 409 (410)
T PRK07103 341 HGLSAAGIVELIATLLQMRAGFLHPSRNLDEPIDERFRWVGSTAESARIRYALSLSFGFGGINTALVLE 409 (410)
T ss_pred cCchhhhHHHHHHHHHHHhCCeeCCCCCCCCCCCCCcCccCCCCcCCCCCEEEEecccCCCceEEEEEe
Confidence 99999888777653 3444321 1245677788888888888875
No 76
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=99.40 E-value=7.5e-12 Score=127.68 Aligned_cols=120 Identities=18% Similarity=0.216 Sum_probs=92.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccE----EEEecc-CCC-------------------CCCcHHHHHHHHcCCCCCceee
Q 014606 85 LKTVLFSIVQDLFSKHKINPKSIDI----LITNCS-VSC-------------------PTPSVAAMVINKFGLKSNVRSF 140 (421)
Q Consensus 85 ~~~la~~Aa~~aL~~ag~~~~~Id~----li~~ss-~~~-------------------~~p~~a~~l~~~LGl~~~~~~~ 140 (421)
...|+.+|+++||+++|+++++++. ++++++ .++ ..+..+..++..+|++ .+.+
T Consensus 87 ~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~gl~--g~~~ 164 (421)
T cd00833 87 QQRLLLEVAWEALEDAGYSPESLAGSRTGVFVGASSSDYLELLARDPDEIDAYAATGTSRAFLANRISYFFDLR--GPSL 164 (421)
T ss_pred HHHHHHHHHHHHHHHcCCCchhcCCCCceEEeCcCHHHHHHHHhhcccccCcccccCcchHHHHHHHHHHcCCC--CCce
Confidence 4689999999999999999887774 665542 211 1244678899999996 5899
Q ss_pred eeeCCcchHHHHHHHHHHHHHHccCCCeEEEEEeccccCC-----------------CccCCCccchhhhcccccCcEEE
Q 014606 141 HLSGMGCSAGILSISLAKDLLRVQKNSLALVLSMESVSSN-----------------GYQGKVKYMQLANCLFRMGGAGI 203 (421)
Q Consensus 141 ~i~~~~C~g~~~al~~A~~li~~g~~~~vLvv~~e~~s~~-----------------~~~~~d~~~~~~~~lfGDGAaA~ 203 (421)
.+. .+|++++.||..|..+|++|..+.+||+++|..... ..+...+. ...++||||+|+
T Consensus 165 ~v~-~acas~~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~~---~g~~~geGAaal 240 (421)
T cd00833 165 TVD-TACSSSLVALHLACQSLRSGECDLALVGGVNLILSPDMFVGFSKAGMLSPDGRCRPFDADA---DGYVRGEGVGVV 240 (421)
T ss_pred eec-cHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeccCCHHHHHHHhhCCCCCCCCCCCCCCCCC---CCeeeeceEEEE
Confidence 999 599999999999999999999999999999985310 00011111 367899999999
Q ss_pred EEecCCc
Q 014606 204 LLSNKKE 210 (421)
Q Consensus 204 lL~~~~~ 210 (421)
||++.+.
T Consensus 241 vL~~~~~ 247 (421)
T cd00833 241 VLKRLSD 247 (421)
T ss_pred EEeeHHH
Confidence 9998654
No 77
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.39 E-value=5e-11 Score=121.37 Aligned_cols=318 Identities=11% Similarity=0.047 Sum_probs=180.9
Q ss_pred CCCceEEEEeeeecCCCCCccCHHHHHHHHHHcC-CCChHHHHHHHHHHHHcCCCCceec-CCCCCCCCCCCChHH--HH
Q 014606 7 PSKRVYLVDFICYKAPESLRAPISAFIEHTERSG-TFDSKAVEFQTKVLERSGVGNETCL-PCGTHLLPADGSLNS--SM 82 (421)
Q Consensus 7 ~~~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~-~~~~~~~~~~~~i~~~~GI~~R~~~-~~~~~~~~~~~s~~~--~~ 82 (421)
..+.|.|.|+|...|.- .+.+++.+.+-... .+.+ +++ ++......+... .++..... -.+... ..
T Consensus 2 ~~~~VvItG~g~~~p~g---~~~~~~w~~L~~g~s~i~~-----~~~-~~~~~~~~~~~g~i~~~~~~~-~~~~~~~~~~ 71 (414)
T PRK08722 2 SKRRVVVTGMGMLSPVG---NTVESSWKALLAGQSGIVN-----IEH-FDTTNFSTRFAGLVKDFNCEE-YMSKKDARKM 71 (414)
T ss_pred CCCCEEEEeeEEECCCC---CCHHHHHHHHHhCCCeeee-----cCc-cccccCCCceeEEcCCCChhH-cCCHHHHhhc
Confidence 45789999999999986 78899988764210 0000 000 001111111110 00000000 000000 01
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCcc----EEEEecc-CC-----------------C--------CCC-cHHHHHHHHc
Q 014606 83 EELKTVLFSIVQDLFSKHKINPKSID----ILITNCS-VS-----------------C--------PTP-SVAAMVINKF 131 (421)
Q Consensus 83 ~~~~~la~~Aa~~aL~~ag~~~~~Id----~li~~ss-~~-----------------~--------~~p-~~a~~l~~~L 131 (421)
.....++..|+.+||+++|+++++.+ .|+++++ .+ . ..+ ..+.+|+..+
T Consensus 72 d~~~~~~l~a~~~Al~dAGl~~~~~~~~r~Gv~vGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~ 151 (414)
T PRK08722 72 DLFIQYGIAAGIQALDDSGLEVTEENAHRIGVAIGSGIGGLGLIEAGHQALVEKGPRKVSPFFVPSTIVNMIAGNLSIMR 151 (414)
T ss_pred CHHHHHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCCcchhHHHHHHHHHhcCcccCCchhcccccccHHHHHHHHHh
Confidence 12346899999999999999754332 3444432 11 0 111 3678899999
Q ss_pred CCCCCceeeeeeCCcchHHHHHHHHHHHHHHccCCCeEEEEEeccccCC-----------Cc----------cC--CCcc
Q 014606 132 GLKSNVRSFHLSGMGCSAGILSISLAKDLLRVQKNSLALVLSMESVSSN-----------GY----------QG--KVKY 188 (421)
Q Consensus 132 Gl~~~~~~~~i~~~~C~g~~~al~~A~~li~~g~~~~vLvv~~e~~s~~-----------~~----------~~--~d~~ 188 (421)
|++ -+.+.++ .+|++++.||..|..+|++|..+.+||+++|..... +. ++ .++
T Consensus 152 gl~--Gp~~ti~-~aCas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~~~- 227 (414)
T PRK08722 152 GLR--GPNIAIS-TACTTGLHNIGHAARMIAYGDADAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQKASRPWDKDR- 227 (414)
T ss_pred CCC--CCccccc-cccHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHcCCcccCCCCCccccCcCcCCC-
Confidence 997 5889999 599999999999999999999999999999985321 00 00 112
Q ss_pred chhhhcccccCcEEEEEecCCccccccceeeee-eeeeeecCCCccceeeeeeccCCCcceeeeChhhhHHHHHHHHHHH
Q 014606 189 MQLANCLFRMGGAGILLSNKKEDRQRAKYELQH-LVRTHLGSKDTAYKCVFQEHDDEGFTGVSLSRSILQVAGEALKANM 267 (421)
Q Consensus 189 ~~~~~~lfGDGAaA~lL~~~~~~~~~~~~~~~~-~~~~~~~t~~~~~~~~~~~~~~~g~~~~~l~~~~p~~~~~~~~~~~ 267 (421)
..++.||||+++||++.+.... .+.++.. +......+|+.. +.. |...+.
T Consensus 228 ---~G~~~gEGaaalvLe~~~~A~~-~g~~i~a~i~g~~~~~d~~~---~~~----------------p~~~~~------ 278 (414)
T PRK08722 228 ---DGFVLGDGAGMMVLEEYEHAKA-RGAKIYAELVGFGMSGDAYH---MTS----------------PSEDGS------ 278 (414)
T ss_pred ---CceEeeceEEEEEEccHHHHHH-CCCeEEEEEEEEEEcCCCCC---CCC----------------CCcchH------
Confidence 4678999999999998654321 0111111 112222222110 000 100000
Q ss_pred HHhhhhccchhHHHHHHHHhhhhhcCCCCCCCCCCCCCccccccEEEecCCCHHH-----HHHHHHHCCCC-hhhhHHHH
Q 014606 268 ATLAAMVLPYSELVWYAVSVTWKKIWPPGRKRGPYIPDFRKAFEHFCVHAGGKAV-----IDAIKENLKLK-DRDVEASK 341 (421)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~gl~~~~~~~~~~~did~~i~Hq~~~~~-----~~~i~~~lgl~-~~~~~~s~ 341 (421)
.....|.+++.++|+++ +|||++-.|-.+-.. .+.+.+.+|-. .+++.- -
T Consensus 279 ---------------~~~~a~~~Al~~agi~~--------~did~ie~hgtgt~~~D~~E~~al~~~fg~~~~~~~~v-~ 334 (414)
T PRK08722 279 ---------------GGALAMEAAMRDAGVTG--------EQIGYVNAHGTSTPAGDVAEIKGIKRALGEAGSKQVLV-S 334 (414)
T ss_pred ---------------HHHHHHHHHHHHcCCCH--------HHcCEEEccCccCCCCCHHHHHHHHHHhcccCCCCcee-e
Confidence 01123446677789984 999999999765433 34455666532 222220 1
Q ss_pred HHHhccCCCccchHHHHHHH---HHHcCCCCC-------------------------CCeEEEEeecccccccceeee
Q 014606 342 TTLYRFGNTSSSSVWYELSY---LEAKGKVKK-------------------------GDKIWQLAFGSGFKCNSAVWK 391 (421)
Q Consensus 342 ~~l~~~Gn~~sasi~i~L~~---~~~~g~~~~-------------------------Gd~vll~~~G~G~~~~~~llr 391 (421)
.+=..+||+.+|+-.+.+.. ++++|.+.| -.+++.-+||-|.+-++++|+
T Consensus 335 s~K~~~GH~~~AaG~~~~~~~~l~l~~~~ipp~~n~~~~~~~~~~~~v~~~~~~~~~~~~~l~nsfGfGG~n~~lvl~ 412 (414)
T PRK08722 335 STKSMTGHLLGAAGSVEAIITVMSLVDQIVPPTINLDDPEEGLDIDLVPHTARKVESMEYAICNSFGFGGTNGSLIFK 412 (414)
T ss_pred CcccccccchHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcccCCCccccCCCCCEEEEecccCCCceEEEEEe
Confidence 23356899999887766643 344443211 244667778888777777775
No 78
>PRK06158 thiolase; Provisional
Probab=99.39 E-value=2.1e-11 Score=123.03 Aligned_cols=86 Identities=14% Similarity=0.063 Sum_probs=73.8
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHHccC
Q 014606 86 KTVLFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLRVQK 165 (421)
Q Consensus 86 ~~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~~g~ 165 (421)
.+|+.+|+++||+++|++++|||.+++++. ....|+ ..+++.||++ ..+.+++. .+|+++..+|..|..+|++|.
T Consensus 29 ~eL~~eA~~~Al~dAgl~~~dID~iv~~~~-~~~~~~--~~la~~lGl~-~~~~~~~~-~g~~s~~~al~~A~~~I~sG~ 103 (384)
T PRK06158 29 MELLAQAAHRALADAGLTMADVDGLFTASP-DDALWG--LSVAEYLGIR-PRFVDGTM-IGGSSFLAHLLPAALALEAGL 103 (384)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecC-CCCCcH--HHHHHHcCCC-Ceeecccc-CccHHHHHHHHHHHHHHHcCC
Confidence 479999999999999999999999998763 223343 5799999998 57888998 599999999999999999999
Q ss_pred CCeEEEE-Eecc
Q 014606 166 NSLALVL-SMES 176 (421)
Q Consensus 166 ~~~vLvv-~~e~ 176 (421)
.++|||+ +.|.
T Consensus 104 ~d~vLV~~g~~~ 115 (384)
T PRK06158 104 CDVALICYGSNQ 115 (384)
T ss_pred CCEEEEeecccc
Confidence 9999998 4443
No 79
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.38 E-value=1.5e-11 Score=125.77 Aligned_cols=319 Identities=14% Similarity=0.133 Sum_probs=181.2
Q ss_pred CCCceEEEEeeeecCCCCCccCHHHHHHHHHHcC-CCChHHHHHHHHHHHHcCCCCceec-CCCCCC-----CCCC--CC
Q 014606 7 PSKRVYLVDFICYKAPESLRAPISAFIEHTERSG-TFDSKAVEFQTKVLERSGVGNETCL-PCGTHL-----LPAD--GS 77 (421)
Q Consensus 7 ~~~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~-~~~~~~~~~~~~i~~~~GI~~R~~~-~~~~~~-----~~~~--~s 77 (421)
+++.|.|+|+|...|.- .+.+++.+.+..-. .+.+ . .. +...+...+... .++... ..++ .+
T Consensus 2 ~~~~V~ItG~g~~~p~g---~~~~~~w~~l~~G~s~i~~--~---~~-~~~~~~~~~~~g~i~~~~~~~~~~fd~~~~i~ 72 (424)
T PRK06333 2 NKKRIVVTGMGAVSPLG---CGVETFWQRLLAGQSGIRT--L---TD-FPVGDLATKIGGQVPDLAEDAEAGFDPDRYLD 72 (424)
T ss_pred CCCCEEEEcceEECCCC---CCHHHHHHHHHcCCCeEEe--C---Cc-ccccCCCCceEEEeccccccccccCChhHcCC
Confidence 35789999999999986 78899998775310 0100 0 00 000011111100 000000 0000 00
Q ss_pred hH--HHHHHHHHHHHHHHHHHHHhCCCCCCCc-c----EEEEeccC-C---------------------CCCC-----cH
Q 014606 78 LN--SSMEELKTVLFSIVQDLFSKHKINPKSI-D----ILITNCSV-S---------------------CPTP-----SV 123 (421)
Q Consensus 78 ~~--~~~~~~~~la~~Aa~~aL~~ag~~~~~I-d----~li~~ss~-~---------------------~~~p-----~~ 123 (421)
.. ........|+..|+++||+++|++++++ + .++++++. . +..+ ..
T Consensus 73 ~~~~~~~d~~~~l~~~aa~~Al~dAgl~~~~~~~~~~~Gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (424)
T PRK06333 73 PKDQRKMDRFILFAMAAAKEALAQAGWDPDTLEDRERTATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMA 152 (424)
T ss_pred HHHHhhcCHHHHHHHHHHHHHHHhcCCCccccCCcccEEEEEecCcccHHHHHHHHHHHHhcCCcccChhHHhhhhhhHH
Confidence 00 0111235789999999999999987766 2 45554421 1 1111 24
Q ss_pred HHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHHccCCCeEEEEEeccccCC-----------C-c---------
Q 014606 124 AAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLRVQKNSLALVLSMESVSSN-----------G-Y--------- 182 (421)
Q Consensus 124 a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~~g~~~~vLvv~~e~~s~~-----------~-~--------- 182 (421)
+.+|+..+|++ .+++.+. .+|++++.||..|..+|++|..+.+||+++|..... + .
T Consensus 153 a~~is~~~gl~--Gp~~~v~-~aCaSg~~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~~~~f~~~~~l~~~~~~~p~~~ 229 (424)
T PRK06333 153 AGHVSIRYGFK--GPLGAPV-TACAAGVQAIGDAARLIRSGEADVAVCGGTEAAIDRVSLAGFAAARALSTRFNDAPEQA 229 (424)
T ss_pred HHHHHHHhCCC--CCCcccc-chhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHcccccccCCCCCCcC
Confidence 67899999996 6888999 599999999999999999999999999999973211 0 0
Q ss_pred -cC--CCccchhhhcccccCcEEEEEecCCccccccceeeee-eeeeeecCCCccceeeeeeccCCCcceeeeChhhhHH
Q 014606 183 -QG--KVKYMQLANCLFRMGGAGILLSNKKEDRQRAKYELQH-LVRTHLGSKDTAYKCVFQEHDDEGFTGVSLSRSILQV 258 (421)
Q Consensus 183 -~~--~d~~~~~~~~lfGDGAaA~lL~~~~~~~~~~~~~~~~-~~~~~~~t~~~~~~~~~~~~~~~g~~~~~l~~~~p~~ 258 (421)
++ .++ ..++.||||+++||++.+.... .+.++.. +...-..+|+.. +..+ .|.
T Consensus 230 ~~Pfd~~~----~G~~~gEGaa~lvLe~~~~A~~-rg~~i~a~i~G~~~~~d~~~---~~~~--------------~~~- 286 (424)
T PRK06333 230 SRPFDRDR----DGFVMGEGAGILVIETLEHALA-RGAPPLAELVGYGTSADAYH---MTAG--------------PED- 286 (424)
T ss_pred CCCCCCCC----CCeEEecceEEEEEeeHHHHHH-CCCeEEEEEEEEEEcCCCCC---CCCC--------------CCC-
Confidence 00 112 3567899999999997543210 0112111 111222222110 0000 000
Q ss_pred HHHHHHHHHHHhhhhccchhHHHHHHHHhhhhhcCCCCCCCCCCCCCccccccEEEecCCCHHH-----HHHHHHHCCCC
Q 014606 259 AGEALKANMATLAAMVLPYSELVWYAVSVTWKKIWPPGRKRGPYIPDFRKAFEHFCVHAGGKAV-----IDAIKENLKLK 333 (421)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~gl~~~~~~~~~~~did~~i~Hq~~~~~-----~~~i~~~lgl~ 333 (421)
.. ...+.|.+++.++|+++ +|||++-.|-.+-.. +..+.+.+| .
T Consensus 287 -~~---------------------~~~~a~~~Al~~Agi~p--------~dId~i~~hgtgt~~~D~~E~~al~~~fg-~ 335 (424)
T PRK06333 287 -GE---------------------GARRAMLIALRQAGIPP--------EEVQHLNAHATSTPVGDLGEVAAIKKVFG-H 335 (424)
T ss_pred -cH---------------------HHHHHHHHHHHHcCCCH--------HHCCEEeccCCCCccchHHHHHHHHHHhC-C
Confidence 00 01133446677789984 999999999766442 345666676 2
Q ss_pred hhhhHHHHHHHhccCCCccchHHHHHHH---HHHcCCCC-------------------------CCCeEEEEeecccccc
Q 014606 334 DRDVEASKTTLYRFGNTSSSSVWYELSY---LEAKGKVK-------------------------KGDKIWQLAFGSGFKC 385 (421)
Q Consensus 334 ~~~~~~s~~~l~~~Gn~~sasi~i~L~~---~~~~g~~~-------------------------~Gd~vll~~~G~G~~~ 385 (421)
...+.- -..-..+||+.+|+-.+.+.. +++.|.+. +-++++.-+||.|.+.
T Consensus 336 ~~~~~v-~s~K~~~GH~~gAaG~~~~~~~~l~l~~g~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~s~gfGG~n 414 (424)
T PRK06333 336 VSGLAV-SSTKSATGHLLGAAGGVEAIFTILALRDQIAPPTLNLENPDPAAEGLDVVANKARPMDMDYALSNGFGFGGVN 414 (424)
T ss_pred CCCcee-ECcccchhhhHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCccccccccCCCcccCcCEEEEeeecCCCee
Confidence 122210 134466899888775544433 34443221 2345677789988888
Q ss_pred cceeeee
Q 014606 386 NSAVWKC 392 (421)
Q Consensus 386 ~~~llr~ 392 (421)
.+++|+.
T Consensus 415 ~~~il~~ 421 (424)
T PRK06333 415 ASILFRR 421 (424)
T ss_pred EEEEEec
Confidence 8888764
No 80
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=99.37 E-value=3.5e-11 Score=119.89 Aligned_cols=242 Identities=14% Similarity=0.143 Sum_probs=156.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHHcc
Q 014606 85 LKTVLFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLRVQ 164 (421)
Q Consensus 85 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~~g 164 (421)
+.+|+..|++.+++ |++ ++||.+|+++.... ....+..+...+|++..++++.++ .+|++++.++..|..+|++|
T Consensus 25 ~~~L~~~a~~~~~~--gi~-~~Id~vi~G~~~~~-~~~~~r~~~~~~Gl~~~~p~~tV~-~~CaSG~~Ai~~a~~~I~sG 99 (361)
T PRK06690 25 VQQLAAPLLTFLSK--GME-REIDDVILGNVVGP-GGNVARLSALEAGLGLHIPGVTID-RQCGAGLEAIRTACHFIQGG 99 (361)
T ss_pred HHHHHHHHHHHHHc--cch-hhcCEEEEEecCCC-cchHHHHHHHHcCCCCCCCceehh-hhhhHHHHHHHHHHHHHHCC
Confidence 35799999999865 896 89999999763221 144455688999998679999999 59999999999999999999
Q ss_pred CCCeEEEEEeccccCCC-----------cc---------------CCCccc-----------------------------
Q 014606 165 KNSLALVLSMESVSSNG-----------YQ---------------GKVKYM----------------------------- 189 (421)
Q Consensus 165 ~~~~vLvv~~e~~s~~~-----------~~---------------~~d~~~----------------------------- 189 (421)
..+.+|++++|.+|... .. .-.|+.
T Consensus 100 ~~d~~l~gG~E~ms~~p~~~~~~~~~~~~~~~~~~~~a~~~~~~ygitre~~d~~A~~s~k~a~~a~~n~~~~~ei~~v~ 179 (361)
T PRK06690 100 AGKCYIAGGVESTSTSPFQNRARFSPETIGDPDMGVAAEYVAERYNITREMQDEYACLSYKRTLQALEKGYIHEEILSFN 179 (361)
T ss_pred CCCEEEEeccccccCCCcccccccCcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCceeccc
Confidence 99999999999987421 00 000000
Q ss_pred ------h-------------------------hhhcccccCcEEEEEecCCcccc---ccceeeeeeeeeeecCCCccce
Q 014606 190 ------Q-------------------------LANCLFRMGGAGILLSNKKEDRQ---RAKYELQHLVRTHLGSKDTAYK 235 (421)
Q Consensus 190 ------~-------------------------~~~~lfGDGAaA~lL~~~~~~~~---~~~~~~~~~~~~~~~t~~~~~~ 235 (421)
+ ..+...+|||+|+||.+.+.... .+..++.+ ....+
T Consensus 180 ~~~d~~~r~~~~~e~ll~~l~p~~~~~g~lt~~~~~~~~DGAaAvvl~s~e~A~~lg~~p~~~i~~---~~~~~------ 250 (361)
T PRK06690 180 GLLDESIKKEMNYERIIKRTKPAFLHNGTVTAGNSCGVNDGACAVLVMEEGQARKLGYKPVLRFVR---SAVVG------ 250 (361)
T ss_pred CccccccCCCCCHHHHhhcCCCcccCCCceeccccCCCCCCeEEEEEecHHHHHHcCCCceEEEEE---EEEec------
Confidence 0 00112378888888886543211 01111111 00000
Q ss_pred eeeeeccCCCcceeeeChhhhHHHHHHHHHHHHHhhhhccchhHHHHHHHHhhhhhcCCCCCCCCCCCCCccccccEEEe
Q 014606 236 CVFQEHDDEGFTGVSLSRSILQVAGEALKANMATLAAMVLPYSELVWYAVSVTWKKIWPPGRKRGPYIPDFRKAFEHFCV 315 (421)
Q Consensus 236 ~~~~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~gl~~~~~~~~~~~did~~i~ 315 (421)
.. |.... ......+.++++++|++ ++|||+|.+
T Consensus 251 ---------------~~---~~~~~---------------------~~~~~a~~~al~~Agl~--------~~Did~~ei 283 (361)
T PRK06690 251 ---------------VD---PNLPG---------------------TGPIFAVNKLLNEMNMK--------VEDIDYFEI 283 (361)
T ss_pred ---------------cC---cccch---------------------hHHHHHHHHHHHHcCCC--------HHHcCEeee
Confidence 00 00000 00112344667788998 499999999
Q ss_pred cCCCHHHHHHHHHHCCCChhhhHHH---HHHHhccCCCccchHHHHHHHHHHcCCCCCCCeE-EEEeecccccccceeee
Q 014606 316 HAGGKAVIDAIKENLKLKDRDVEAS---KTTLYRFGNTSSSSVWYELSYLEAKGKVKKGDKI-WQLAFGSGFKCNSAVWK 391 (421)
Q Consensus 316 Hq~~~~~~~~i~~~lgl~~~~~~~s---~~~l~~~Gn~~sasi~i~L~~~~~~g~~~~Gd~v-ll~~~G~G~~~~~~llr 391 (421)
|+..........+.||++++++..+ ....+.+|++|...++..+.++.+.| +.+. ..++.|.|.. .+++++
T Consensus 284 ~eafa~~~~~~~e~lgl~~~~vn~~GG~la~Ghp~GatG~~~~~~~~~ql~~~~----~~~g~~~~c~~gG~g-~a~~~e 358 (361)
T PRK06690 284 NEAFASKVVACAKELQIPYEKLNVNGGAIALGHPYGASGAMLVTRLFYQAKRED----MKYGIATLGIGGGIG-LALLFE 358 (361)
T ss_pred cchhHHHHHHHHHhcCCCchhcccCCcHHhccCchhhhHHHHHHHHHHHHHHhC----CCEEEEEEcccCcce-eEEEEE
Confidence 9999999999999999998877411 01145788888888888888876532 3333 3344444433 445554
Q ss_pred e
Q 014606 392 C 392 (421)
Q Consensus 392 ~ 392 (421)
.
T Consensus 359 ~ 359 (361)
T PRK06690 359 K 359 (361)
T ss_pred e
Confidence 3
No 81
>PRK08256 lipid-transfer protein; Provisional
Probab=99.36 E-value=3.5e-11 Score=121.74 Aligned_cols=88 Identities=14% Similarity=0.228 Sum_probs=74.8
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEec-cCCCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHHcc
Q 014606 86 KTVLFSIVQDLFSKHKINPKSIDILITNC-SVSCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLRVQ 164 (421)
Q Consensus 86 ~~la~~Aa~~aL~~ag~~~~~Id~li~~s-s~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~~g 164 (421)
.+|+.+|+++||+++|+++++||.+++++ .++... ...+...+|++ .+++++++ .+|+++..+|..|..+|++|
T Consensus 23 ~~La~~A~~~Al~dAGl~~~dID~~~~g~~~~~~~~---~~~~~~~lGl~-~~~~~~v~-~~caSg~~ai~~A~~~I~sG 97 (391)
T PRK08256 23 PDMAAEAGRAALADAGIDYDAVQQAYVGYVYGDSTS---GQRALYEVGMT-GIPIVNVN-NNCSTGSTALFLARQAVRSG 97 (391)
T ss_pred HHHHHHHHHHHHHHcCCChHHCCeeEEEEEeCCcch---hHHHHHHcCCC-CCCCcccc-cccHHHHHHHHHHHHHHHCC
Confidence 47999999999999999999999998865 332211 23567789997 57889999 59999999999999999999
Q ss_pred CCCeEEEEEecccc
Q 014606 165 KNSLALVLSMESVS 178 (421)
Q Consensus 165 ~~~~vLvv~~e~~s 178 (421)
..++|||+++|.++
T Consensus 98 ~~d~vLv~g~e~~s 111 (391)
T PRK08256 98 AADCALALGFEQMQ 111 (391)
T ss_pred CCCEEEEEEEeecc
Confidence 99999999998764
No 82
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=99.36 E-value=3e-11 Score=121.74 Aligned_cols=94 Identities=14% Similarity=0.269 Sum_probs=81.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccC-CCCC-CcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHH
Q 014606 85 LKTVLFSIVQDLFSKHKINPKSIDILITNCSV-SCPT-PSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLR 162 (421)
Q Consensus 85 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~ss~-~~~~-p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~ 162 (421)
+.+|+.+|++++|+++|+++++||.+++++.. .... ...+..+...+|++.+++++.|+ .+|++++.|+..|...|+
T Consensus 26 ~~eL~~~a~~~aL~~agi~~~~Id~v~~G~~~~~~~q~~~~ar~~~l~~Gl~~~~p~~tV~-~~CaSG~~A~~~A~~~I~ 104 (387)
T PRK07850 26 AAELLGAVQRAVLDRAGIDPGDVEQVIGGCVTQAGEQSNNITRTAWLHAGLPYHVGATTID-CQCGSAQQANHLVAGLIA 104 (387)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchHHHHHHHhCCCCCCCceEEEe-cccccHHHHHHHHHHHHH
Confidence 45899999999999999999999999997632 2221 34566777889998679999999 599999999999999999
Q ss_pred ccCCCeEEEEEeccccC
Q 014606 163 VQKNSLALVLSMESVSS 179 (421)
Q Consensus 163 ~g~~~~vLvv~~e~~s~ 179 (421)
+|..+.+|+++.|.+|.
T Consensus 105 sG~~dvvla~G~E~mS~ 121 (387)
T PRK07850 105 AGAIDVGIACGVEAMSR 121 (387)
T ss_pred CCCCCEEEEEeEecCCC
Confidence 99999999999999875
No 83
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=99.35 E-value=2.6e-11 Score=123.01 Aligned_cols=93 Identities=17% Similarity=0.263 Sum_probs=80.0
Q ss_pred HHHHHHHHHHHHHHhC-CCCCCCccEEEEec-cCC-CCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHH
Q 014606 85 LKTVLFSIVQDLFSKH-KINPKSIDILITNC-SVS-CPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLL 161 (421)
Q Consensus 85 ~~~la~~Aa~~aL~~a-g~~~~~Id~li~~s-s~~-~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li 161 (421)
..+|+.+|+++||+++ |++++|||.+|+++ .+. ...+..+..++..+|++ ..+++.++ .+|+++..++..|..+|
T Consensus 27 ~~eL~~~A~~~AL~da~gl~~~dID~vv~g~~~~~~~~g~~~~~~~a~~lGl~-~~p~~~v~-~~caSG~~av~~Aa~~I 104 (406)
T PRK07851 27 PDDLAAQMVRAALDKVPALDPTDIDDLMLGCGLPGGEQGFNMARVVAVLLGYD-FLPGTTVN-RYCSSSLQTTRMAFHAI 104 (406)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCCEEEEEcccccccccCCHHHHHHHHcCCC-CCCeeeee-ccchhHHHHHHHHHHHH
Confidence 3579999999999996 99999999999874 322 22355678899999996 68999999 59999999999999999
Q ss_pred HccCCCeEEEEEeccccC
Q 014606 162 RVQKNSLALVLSMESVSS 179 (421)
Q Consensus 162 ~~g~~~~vLvv~~e~~s~ 179 (421)
++|..+.|||+++|.+|.
T Consensus 105 ~sG~~d~vLv~G~e~~s~ 122 (406)
T PRK07851 105 KAGEGDVFISAGVETVSR 122 (406)
T ss_pred HCCCCCEEEEeeEEeccc
Confidence 999999999999997543
No 84
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=99.34 E-value=4.6e-11 Score=120.80 Aligned_cols=91 Identities=11% Similarity=0.227 Sum_probs=74.6
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEecc-CCCC--CCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHH
Q 014606 86 KTVLFSIVQDLFSKHKINPKSIDILITNCS-VSCP--TPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLR 162 (421)
Q Consensus 86 ~~la~~Aa~~aL~~ag~~~~~Id~li~~ss-~~~~--~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~ 162 (421)
.+|+.+|+++||+++|+++++||.|+++++ ++.. .+..+..+...+|++ ..+.++++ .+|++++.||..|..+|+
T Consensus 23 ~eL~~eA~~~AL~dAgl~~~dId~vi~g~~~~~~~~~~~~~~~~~~~~~gl~-~~p~~~v~-~~CaSg~~Al~~A~~~I~ 100 (389)
T PRK07516 23 ESLIVRVAREALAHAGIAAGDVDGIFLGHFNAGFSPQDFPASLVLQADPALR-FKPATRVE-NACATGSAAVYAALDAIE 100 (389)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCccccccchhHHHHHhcCCC-CCceeeec-cccHHHHHHHHHHHHHHH
Confidence 479999999999999999999999998753 2211 111223344566887 68999999 599999999999999999
Q ss_pred ccCCCeEEEEEecccc
Q 014606 163 VQKNSLALVLSMESVS 178 (421)
Q Consensus 163 ~g~~~~vLvv~~e~~s 178 (421)
+|.+++|||+++|.+|
T Consensus 101 sG~~d~vLvvg~e~~s 116 (389)
T PRK07516 101 AGRARIVLVVGAEKMT 116 (389)
T ss_pred CCCCCEEEEEEehhhc
Confidence 9999999999999854
No 85
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=99.34 E-value=5.9e-11 Score=120.10 Aligned_cols=93 Identities=15% Similarity=0.179 Sum_probs=78.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEecc-CCCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHHc
Q 014606 85 LKTVLFSIVQDLFSKHKINPKSIDILITNCS-VSCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLRV 163 (421)
Q Consensus 85 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~ss-~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~~ 163 (421)
..+|+.+|++++|+++|+++++||.||+++. .....+..+..++..+|++.+.+++.++ .+|+++..++..|.++|++
T Consensus 25 ~~~L~~~a~~~al~dAgl~~~~ID~vv~g~~~~~~~~~~~~~~~~~~~Gl~~~~p~~~v~-~~caSg~~av~~Aa~~I~s 103 (394)
T PLN02644 25 ATELGSIAIQAALERAGVDPALVQEVFFGNVLSANLGQAPARQAALGAGLPPSTICTTVN-KVCASGMKAVMLAAQSIQL 103 (394)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCcCCcCCcHHHHHHHhcCCCCCCceEEEe-ccchHHHHHHHHHHHHHHc
Confidence 3589999999999999999999999998652 2121234556788999997668889999 5999999999999999999
Q ss_pred cCCCeEEEEEecccc
Q 014606 164 QKNSLALVLSMESVS 178 (421)
Q Consensus 164 g~~~~vLvv~~e~~s 178 (421)
|..+.||+++.|.+|
T Consensus 104 G~~d~vlv~G~E~~s 118 (394)
T PLN02644 104 GINDVVVAGGMESMS 118 (394)
T ss_pred CCCCEEEEEeEEecC
Confidence 999999999988764
No 86
>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.34 E-value=1.4e-10 Score=117.87 Aligned_cols=314 Identities=12% Similarity=0.090 Sum_probs=177.2
Q ss_pred CceEEEEeeeecCCCCCccCHHHHHHHHHHcCCCChHHHHHHHHHHHHcCCCCceecC-CCCCCCCCCCChH--HHHHHH
Q 014606 9 KRVYLVDFICYKAPESLRAPISAFIEHTERSGTFDSKAVEFQTKVLERSGVGNETCLP-CGTHLLPADGSLN--SSMEEL 85 (421)
Q Consensus 9 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~-~~~~~~~~~~s~~--~~~~~~ 85 (421)
+.|.|+|+|...|-- .+.+++.+.+..- .-. .+.+.+ +...+...+.... ++..... ..+.. ......
T Consensus 2 ~~v~ItG~g~vsp~G---~~~~~~~~~L~~G-~s~---i~~~~~-~~~~~~~~~~~g~i~~f~~~~-~~~~~~~~~~~~~ 72 (406)
T PRK08439 2 KRVVVTGIGMINSLG---LNKESSFKAICNG-ECG---IKKITL-FDASDFPVQIAGEITDFDPTE-VMDPKEVKKADRF 72 (406)
T ss_pred CCEEEEeeEEECCCc---CCHHHHHHHHHcC-CCc---eEeCCC-ccccCCCCceeEEcCCcChhh-cCCHHHHhhcCHH
Confidence 579999999999986 7888888877421 000 000000 0001111111100 0000000 00000 011124
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcc----EEEEecc-CC-------------------------CCCC-cHHHHHHHHcCCC
Q 014606 86 KTVLFSIVQDLFSKHKINPKSID----ILITNCS-VS-------------------------CPTP-SVAAMVINKFGLK 134 (421)
Q Consensus 86 ~~la~~Aa~~aL~~ag~~~~~Id----~li~~ss-~~-------------------------~~~p-~~a~~l~~~LGl~ 134 (421)
..|+..|+++||+++|+++++++ .++++++ .. ...+ ..+..|+..+|++
T Consensus 73 ~~l~~~Aa~~AL~dAGl~~~~~~~~r~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~ 152 (406)
T PRK08439 73 IQLGLKAAREAMKDAGFLPEELDAERFGVSSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVNMLGGFISIEHGLK 152 (406)
T ss_pred HHHHHHHHHHHHHHcCCCcccCCCCCEEEEEecCCccHHHHHHHHHHHHhcCccccCchhcccccccHHHHHHHHHhCCC
Confidence 67999999999999999887765 2444331 10 0112 4678899999997
Q ss_pred CCceeeeeeCCcchHHHHHHHHHHHHHHccCCCeEEEEEeccc-cCC----------Cc----------cC--CCccchh
Q 014606 135 SNVRSFHLSGMGCSAGILSISLAKDLLRVQKNSLALVLSMESV-SSN----------GY----------QG--KVKYMQL 191 (421)
Q Consensus 135 ~~~~~~~i~~~~C~g~~~al~~A~~li~~g~~~~vLvv~~e~~-s~~----------~~----------~~--~d~~~~~ 191 (421)
.+++.+. .+|++++.||..|..+|++|..+.+||+++|.. +.. +. ++ .++
T Consensus 153 --Gp~~~~~-~acas~~~Al~~A~~~i~~G~~d~~lv~g~d~~l~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~~~---- 225 (406)
T PRK08439 153 --GPNLSSV-TACAAGTHAIIEAVKTIMLGGADKMLVVGAESAICPVGIGGFAAMKALSTRNDDPKKASRPFDKDR---- 225 (406)
T ss_pred --CCccccc-cHhHHHHHHHHHHHHHHHcCCCCEEEEecchhccCHHHHHHHHHhCccccCCCCCccCcCCccCCC----
Confidence 5778888 599999999999999999999999999999963 210 00 00 122
Q ss_pred hhcccccCcEEEEEecCCccccccceeeeee-eeeeecCCCccceeeeeeccCCCcceeeeChhhhHHHHHHHHHHHHHh
Q 014606 192 ANCLFRMGGAGILLSNKKEDRQRAKYELQHL-VRTHLGSKDTAYKCVFQEHDDEGFTGVSLSRSILQVAGEALKANMATL 270 (421)
Q Consensus 192 ~~~lfGDGAaA~lL~~~~~~~~~~~~~~~~~-~~~~~~t~~~~~~~~~~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~~~ 270 (421)
..+++|+||+++||++.+.... .+.++... .......|+ + ++. .|...+
T Consensus 226 ~G~v~gEGa~~lvLe~~~~A~~-rg~~i~a~i~g~~~~~d~--~---------------~~~--~p~~~~---------- 275 (406)
T PRK08439 226 DGFVMGEGAGALVLEEYESAKK-RGAKIYAEIIGFGESGDA--N---------------HIT--SPAPEG---------- 275 (406)
T ss_pred CcEEeeCceEEEEEccHHHHHH-CCCeEEEEEEeEEccCCC--C---------------CCC--CCCHHH----------
Confidence 3678999999999997543211 11222111 111111111 0 000 011000
Q ss_pred hhhccchhHHHHHHHHhhhhhcCCCCCCCCCCCCCccccccEEEecCCCHHH-----HHHHHHHCCCChhhhHHHHHHHh
Q 014606 271 AAMVLPYSELVWYAVSVTWKKIWPPGRKRGPYIPDFRKAFEHFCVHAGGKAV-----IDAIKENLKLKDRDVEASKTTLY 345 (421)
Q Consensus 271 ~~~~~~~~~~~~~~~~~i~~~l~~~gl~~~~~~~~~~~did~~i~Hq~~~~~-----~~~i~~~lgl~~~~~~~s~~~l~ 345 (421)
..+.|.++|.++|+ +|||++-.|-.+-+. .+.+.+.++-......- -.+-.
T Consensus 276 -------------~~~a~~~al~~ag~----------~~i~~v~~hgtgt~~~D~~E~~al~~~f~~~~~~~~v-~s~K~ 331 (406)
T PRK08439 276 -------------PLRAMKAALEMAGN----------PKIDYINAHGTSTPYNDKNETAALKELFGSKEKVPPV-SSTKG 331 (406)
T ss_pred -------------HHHHHHHHHHHcCC----------CccCEEEccCCcCCCCCHHHHHHHHHHhcccCCCCeE-ECccc
Confidence 11233455555664 579999999865433 34455666532222110 12335
Q ss_pred ccCCCccchHHHHHHH---HHHcCCCC------------------------CCCeEEEEeecccccccceeeee
Q 014606 346 RFGNTSSSSVWYELSY---LEAKGKVK------------------------KGDKIWQLAFGSGFKCNSAVWKC 392 (421)
Q Consensus 346 ~~Gn~~sasi~i~L~~---~~~~g~~~------------------------~Gd~vll~~~G~G~~~~~~llr~ 392 (421)
.+||+.+|+-.+.+.. ++++|.+. +-..+|.-+||-|.+-++++|+.
T Consensus 332 ~~Gh~~~AsG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nsfgfGG~n~~lvl~~ 405 (406)
T PRK08439 332 QIGHCLGAAGAIEAVISIMAMRDGILPPTINQETPDPECDLDYIPNVARKAELNVVMSNSFGFGGTNGVVIFKK 405 (406)
T ss_pred ccccCchhhhHHHHHHHHHHHhCCeeCCCCCCCCCCCCCCcccCCCccccCCCCEEEEeeecCCCceEEEEEec
Confidence 5899999987665543 34444322 12446788899888888888863
No 87
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=99.33 E-value=3.8e-11 Score=120.98 Aligned_cols=94 Identities=17% Similarity=0.313 Sum_probs=82.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEec-cCCCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHHc
Q 014606 85 LKTVLFSIVQDLFSKHKINPKSIDILITNC-SVSCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLRV 163 (421)
Q Consensus 85 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s-s~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~~ 163 (421)
+.+|+.+|++++|+++|+++++||.+++++ .....-...+..++..+|++.+++++.|+ .+|++++.|+..|..+|++
T Consensus 27 ~~~L~~~a~~~al~~agi~~~~Id~vv~G~~~~~~~g~~~~r~~~~~~Gl~~~~p~~~V~-~~CaSG~~Ai~~A~~~I~s 105 (392)
T PRK06633 27 APMLAAHLIKDILQNSKIDPALVNEVILGQVITGGSGQNPARQTLIHAGIPKEVPGYTIN-KVCGSGLKSVALAANSIMT 105 (392)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCccccccHHHHHHHHHCCCCCCccchhhc-chhHHHHHHHHHHHHHHHc
Confidence 458999999999999999999999999975 32222345677788999998669999999 5999999999999999999
Q ss_pred cCCCeEEEEEeccccC
Q 014606 164 QKNSLALVLSMESVSS 179 (421)
Q Consensus 164 g~~~~vLvv~~e~~s~ 179 (421)
|..+.+|+++.|.+|.
T Consensus 106 G~~dvvla~G~E~ms~ 121 (392)
T PRK06633 106 GDNEIVIAGGQENMSL 121 (392)
T ss_pred CCCCEEEEcccccCCC
Confidence 9999999999998773
No 88
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=99.32 E-value=6.9e-11 Score=119.46 Aligned_cols=94 Identities=19% Similarity=0.265 Sum_probs=83.7
Q ss_pred HHHHHHHHHHHHHHh-CCCCCCCccEEEEec-cCC-CCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHH
Q 014606 85 LKTVLFSIVQDLFSK-HKINPKSIDILITNC-SVS-CPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLL 161 (421)
Q Consensus 85 ~~~la~~Aa~~aL~~-ag~~~~~Id~li~~s-s~~-~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li 161 (421)
+.+|+..|++++|++ +|+++++||.+|+++ .+. ...+..+..+...+|++.+++++.|+ .+|+|++.|+.+|.++|
T Consensus 26 ~~~L~~~a~~~al~r~a~i~~~~Id~vi~G~~~~~~~~g~~~ar~~~l~~Gl~~~vp~~tV~-~~CaSG~~Av~~A~~~I 104 (400)
T PRK13359 26 ADDLGAVPLKALVERNPDVDWAAIDDVIYGCANQAGEDNRNVARMSLLLAGLPHGVPGSTIN-RLCGSGMDAVGVAARAI 104 (400)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCceEEEe-ccchhHHHHHHHHHHHH
Confidence 458999999999997 599999999999976 332 22377889999999999779999999 59999999999999999
Q ss_pred HccCCCeEEEEEeccccC
Q 014606 162 RVQKNSLALVLSMESVSS 179 (421)
Q Consensus 162 ~~g~~~~vLvv~~e~~s~ 179 (421)
++|..+.+|+++.|.+|.
T Consensus 105 ~sG~~divlagGvEsmS~ 122 (400)
T PRK13359 105 KSGEAALMIAGGVESMSR 122 (400)
T ss_pred HcCCCCEEEEeeeeccCC
Confidence 999999999999999875
No 89
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=99.32 E-value=8.4e-11 Score=120.13 Aligned_cols=94 Identities=16% Similarity=0.320 Sum_probs=82.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCC-CCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHHc
Q 014606 85 LKTVLFSIVQDLFSKHKINPKSIDILITNCSVSCP-TPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLRV 163 (421)
Q Consensus 85 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~-~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~~ 163 (421)
+.+|+.+|++++|+++|+++++||.+|+++..... .+.++..++..+|++..++++.|+ .+|++++.|+..|..+|++
T Consensus 29 ~~eL~~~a~~~al~~agl~~~~ID~vi~G~~~~~~~~~~~ar~~a~~aGl~~~~P~~tV~-~aCaSG~~Ai~~Aa~~I~s 107 (428)
T PRK08963 29 AVDLGKMVVGELLARSEIDPELIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVS-RACATSFQAVANVAESIMA 107 (428)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCccHHHHHHHHHCCCCCCCcceeeh-hhhHHHHHHHHHHHHHHHC
Confidence 45899999999999999999999999998632222 255677799999998568999999 5999999999999999999
Q ss_pred cCCCeEEEEEeccccC
Q 014606 164 QKNSLALVLSMESVSS 179 (421)
Q Consensus 164 g~~~~vLvv~~e~~s~ 179 (421)
|..+.||+++.|.+|.
T Consensus 108 G~~dvvLvgG~Esms~ 123 (428)
T PRK08963 108 GTIDIGIAGGADSSSV 123 (428)
T ss_pred CCCCEEEEecccccCC
Confidence 9999999999998874
No 90
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=99.32 E-value=7.7e-11 Score=119.71 Aligned_cols=89 Identities=16% Similarity=0.186 Sum_probs=71.7
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEec-cCCCCC-----CcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHH
Q 014606 86 KTVLFSIVQDLFSKHKINPKSIDILITNC-SVSCPT-----PSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKD 159 (421)
Q Consensus 86 ~~la~~Aa~~aL~~ag~~~~~Id~li~~s-s~~~~~-----p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~ 159 (421)
.+|+.+|+++||+++|+++++||.+|+++ ++++.. +..... ..+++. ..++++++ .+|+++..+|.+|..
T Consensus 27 ~eLa~eA~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~--~~~~~~-g~~~~~v~-~~Casg~~al~~Aa~ 102 (403)
T PRK06289 27 ADLTREVVDGTLAAAGVDADDIEVVHVGNFFGELFAGQGHLGAMPAT--VHPALW-GVPASRHE-AACASGSVATLAAMA 102 (403)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccccchHHHH--HhhcCC-CCceeecc-cccHHHHHHHHHHHH
Confidence 47999999999999999999999999876 344322 222222 223444 46799999 599999999999999
Q ss_pred HHHccCCCeEEEEEecccc
Q 014606 160 LLRVQKNSLALVLSMESVS 178 (421)
Q Consensus 160 li~~g~~~~vLvv~~e~~s 178 (421)
+|++|.+++|||+++|.++
T Consensus 103 ~I~sG~~~~VLvvg~e~~s 121 (403)
T PRK06289 103 DLRAGRYDVALVVGVELMK 121 (403)
T ss_pred HHHcCCCCEEEEEEEEecC
Confidence 9999999999999999754
No 91
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=99.30 E-value=3.8e-10 Score=117.80 Aligned_cols=318 Identities=11% Similarity=0.085 Sum_probs=180.0
Q ss_pred CCceEEEEeeeecCCCCCccCHHHHHHHHHHcC-CCChHHHHHHHHHHHHcCCCCceecC-CCCCCC-CCCCChHHHHHH
Q 014606 8 SKRVYLVDFICYKAPESLRAPISAFIEHTERSG-TFDSKAVEFQTKVLERSGVGNETCLP-CGTHLL-PADGSLNSSMEE 84 (421)
Q Consensus 8 ~~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~-~~~~~~~~~~~~i~~~~GI~~R~~~~-~~~~~~-~~~~s~~~~~~~ 84 (421)
.+.|.|.|+|...|-- .+.+++.+.+..-. .+.+ +++ +....+..|.-.. ++.... ............
T Consensus 128 ~~rVvITG~G~vtp~G---~~~~~~w~~L~~G~s~i~~-----~~~-f~~~~~~~~~ag~i~~f~~~~~l~~k~~r~md~ 198 (540)
T PLN02787 128 QRRVVVTGMGVVSPLG---HDPDVFYNNLLEGVSGISE-----IER-FDCSQFPTRIAGEIKSFSTDGWVAPKLSKRMDK 198 (540)
T ss_pred CCCEEEEeeEEECCCC---CCHHHHHHHHHcCCCcccc-----cCc-cchhhCCccccccccccChhhcCCHHHHHhCCH
Confidence 4689999999999986 78889988774210 0110 000 0001111111000 000000 000000001112
Q ss_pred HHHHHHHHHHHHHHhCCCCCCC---cc----EEEEecc-CC--------------------C----CCC-cHHHHHHHHc
Q 014606 85 LKTVLFSIVQDLFSKHKINPKS---ID----ILITNCS-VS--------------------C----PTP-SVAAMVINKF 131 (421)
Q Consensus 85 ~~~la~~Aa~~aL~~ag~~~~~---Id----~li~~ss-~~--------------------~----~~p-~~a~~l~~~L 131 (421)
...++..|+++||+++|++++. ++ .|+++++ .+ + ..+ ..+..|+..+
T Consensus 199 ~~~~al~Aa~eAL~dAGl~~~~~~~~~~~r~GV~vGt~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~~ 278 (540)
T PLN02787 199 FMLYLLTAGKKALADGGITEDVMKELDKTKCGVLIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATTNMGSAMLAMDL 278 (540)
T ss_pred HHHHHHHHHHHHHHHcCCCcccccccCCCceEEEEEeccchHHHHHHHHHHHhhccccCCcchhhhhcccHHHHHHHHHh
Confidence 3468999999999999987542 21 3555442 11 0 011 2357889999
Q ss_pred CCCCCceeeeeeCCcchHHHHHHHHHHHHHHccCCCeEEEEEeccc-cCC----------C-----------ccC-CCcc
Q 014606 132 GLKSNVRSFHLSGMGCSAGILSISLAKDLLRVQKNSLALVLSMESV-SSN----------G-----------YQG-KVKY 188 (421)
Q Consensus 132 Gl~~~~~~~~i~~~~C~g~~~al~~A~~li~~g~~~~vLvv~~e~~-s~~----------~-----------~~~-~d~~ 188 (421)
|+. .+.+.++ .+|+++..||..|..+|++|..+.+||.++|.. +.. + .+. .++
T Consensus 279 gl~--Gp~~tis-tACASs~~Ai~~A~~~Ir~G~aD~aLvGG~d~~l~p~~~~~f~~~~aLS~~~~~p~~~~rPFD~~r- 354 (540)
T PLN02787 279 GWM--GPNYSIS-TACATSNFCILNAANHIIRGEADVMLCGGSDAAIIPIGLGGFVACRALSQRNDDPTKASRPWDMNR- 354 (540)
T ss_pred CCC--CCccccc-cccccHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHHHHHHhhccCCCcccccCCcccCC-
Confidence 996 6889999 599999999999999999999999999999962 210 0 000 122
Q ss_pred chhhhcccccCcEEEEEecCCccccccceeeee-eeeeeecCCCccceeeeeeccCCCcceeeeChhhhHHHHHHHHHHH
Q 014606 189 MQLANCLFRMGGAGILLSNKKEDRQRAKYELQH-LVRTHLGSKDTAYKCVFQEHDDEGFTGVSLSRSILQVAGEALKANM 267 (421)
Q Consensus 189 ~~~~~~lfGDGAaA~lL~~~~~~~~~~~~~~~~-~~~~~~~t~~~~~~~~~~~~~~~g~~~~~l~~~~p~~~~~~~~~~~ 267 (421)
..+++|+||+++||++.+.... .+..+.. +...-..+|+.+ +..+ + |+ +..
T Consensus 355 ---dGfv~GEGAa~lVLE~~e~A~~-rGa~IyA~I~G~g~s~Da~~---~t~p-----------~---p~--g~g----- 406 (540)
T PLN02787 355 ---DGFVMGEGAGVLLLEELEHAKK-RGANIYAEFLGGSFTCDAYH---MTEP-----------H---PE--GAG----- 406 (540)
T ss_pred ---CCcccccceEEEEEeeHHHHHH-CCCeeEEEEEEEEEecCCCC---CCCC-----------C---cC--HHH-----
Confidence 3678999999999997543211 1122211 111222222210 0000 0 10 000
Q ss_pred HHhhhhccchhHHHHHHHHhhhhhcCCCCCCCCCCCCCccccccEEEecCCCHHH-----HHHHHHHCCCChhhhHHHHH
Q 014606 268 ATLAAMVLPYSELVWYAVSVTWKKIWPPGRKRGPYIPDFRKAFEHFCVHAGGKAV-----IDAIKENLKLKDRDVEASKT 342 (421)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~gl~~~~~~~~~~~did~~i~Hq~~~~~-----~~~i~~~lgl~~~~~~~s~~ 342 (421)
....|.++|.++|+++ +|||++-.|-.+-.. .+.+.+.||-.+ .+.- -.
T Consensus 407 ----------------~~~am~~AL~~AGl~p--------~dIdyInaHGTGT~~gD~~E~~Ai~~~Fg~~~-~~pV-~S 460 (540)
T PLN02787 407 ----------------VILCIEKALAQSGVSK--------EDVNYINAHATSTKAGDLKEYQALMRCFGQNP-ELRV-NS 460 (540)
T ss_pred ----------------HHHHHHHHHHHcCCCH--------HHCcEEEccCccCCCCCHHHHHHHHHHhCCCC-Ccee-eC
Confidence 1134556777889984 999999999876433 345566676321 1210 12
Q ss_pred HHhccCCCccchHHHHHHH---HHHcCCCCC-------------------------CCeEEEEeecccccccceeeee
Q 014606 343 TLYRFGNTSSSSVWYELSY---LEAKGKVKK-------------------------GDKIWQLAFGSGFKCNSAVWKC 392 (421)
Q Consensus 343 ~l~~~Gn~~sasi~i~L~~---~~~~g~~~~-------------------------Gd~vll~~~G~G~~~~~~llr~ 392 (421)
+=..+||+.+|+-.+.+.. ++++|.+.| -+.+|.-+||-|..-++++|+-
T Consensus 461 ~Ks~iGH~~gAAGa~eli~~~lal~~g~iPPt~n~~~pd~~~~~~~~v~~~~~~~~ir~aL~nSfGFGG~Naslvl~~ 538 (540)
T PLN02787 461 TKSMIGHLLGAAGAVEAIATVQAIRTGWVHPNINLENPESGVDTKVLVGPKKERLDIKVALSNSFGFGGHNSSILFAP 538 (540)
T ss_pred CCCCcCCCcccchHHHHHHHHHHHhcCCcCCCCCCCCCCccCCcccccccccccCCcCEEEEeeecCCceeEEEEEEe
Confidence 3356899998886655543 344444321 1335677888888888888764
No 92
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=99.30 E-value=1.4e-10 Score=116.95 Aligned_cols=94 Identities=15% Similarity=0.239 Sum_probs=78.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEec-cC-CCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHH
Q 014606 85 LKTVLFSIVQDLFSKHKINPKSIDILITNC-SV-SCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLR 162 (421)
Q Consensus 85 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s-s~-~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~ 162 (421)
+.+|+.+|++++|+++|+++++||.+|+++ .+ +...+..+....-..|++.+++.+.|+ .+|+|++.|+..|.++|+
T Consensus 26 ~~~L~~~a~~~al~~a~l~~~~Id~vi~G~~~~~~~~~~~~ar~~~l~~gl~~~vP~~tV~-~~CaSG~~Ai~~A~~~I~ 104 (390)
T PRK06504 26 PADLAAQVLDALVDRSGADPALIEDVIMGCVSQVGEQATNVARNAVLASKLPESVPGTSID-RQCGSSQQALHFAAQAVM 104 (390)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCceEEEe-chhhHHHHHHHHHHHHHH
Confidence 458999999999999999999999999975 32 221244555544445886679999999 599999999999999999
Q ss_pred ccCCCeEEEEEeccccC
Q 014606 163 VQKNSLALVLSMESVSS 179 (421)
Q Consensus 163 ~g~~~~vLvv~~e~~s~ 179 (421)
+|..+.+|+++.|.+|.
T Consensus 105 sG~~dvvLagGvEsmS~ 121 (390)
T PRK06504 105 SGTMDIVIAAGVESMTR 121 (390)
T ss_pred CCCCCEEEEeeeeecCC
Confidence 99999999999998874
No 93
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=99.29 E-value=1.2e-10 Score=117.67 Aligned_cols=93 Identities=16% Similarity=0.257 Sum_probs=79.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEecc-CCCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHHc
Q 014606 85 LKTVLFSIVQDLFSKHKINPKSIDILITNCS-VSCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLRV 163 (421)
Q Consensus 85 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~ss-~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~~ 163 (421)
+.+|+.+|++++|+++|++++|||.+|+++. ........+..++..+|++.+++.+.++ .+|++++.++..|..+|++
T Consensus 26 ~~~L~~~a~~~al~dagi~~~dID~vi~g~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~v~-~~caSg~~av~~Aa~~I~s 104 (388)
T PRK06366 26 APQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGVGQNPAGQAAYHAGLPFGVTKYTVN-VVCASGMLAVESAAREIML 104 (388)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCccCcHHHHHHHHCCCCCCCcceeee-chhhHHHHHHHHHHHHHhc
Confidence 4579999999999999999999999998753 2222234567899999998568999999 5999999999999999999
Q ss_pred cCCCeEEEEEecccc
Q 014606 164 QKNSLALVLSMESVS 178 (421)
Q Consensus 164 g~~~~vLvv~~e~~s 178 (421)
|..+.||+++.|.++
T Consensus 105 G~~d~vla~G~e~ms 119 (388)
T PRK06366 105 GERDLVIAGGMENMS 119 (388)
T ss_pred CCCCEEEEEeeEccc
Confidence 999999999888865
No 94
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.29 E-value=3.3e-10 Score=113.98 Aligned_cols=299 Identities=12% Similarity=0.127 Sum_probs=176.4
Q ss_pred CceEEEEeeeecCCCCCccCHHHHHHHHHHcCCCChHHHHHHHHHHHHcCCCCc-eecC-CCCCCCCCCCChHHHHHHHH
Q 014606 9 KRVYLVDFICYKAPESLRAPISAFIEHTERSGTFDSKAVEFQTKVLERSGVGNE-TCLP-CGTHLLPADGSLNSSMEELK 86 (421)
Q Consensus 9 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R-~~~~-~~~~~~~~~~s~~~~~~~~~ 86 (421)
+.|.|.|+|..-|-- . .+++.+.+..- ++||..- .|.. +........... ....
T Consensus 2 ~rVvITG~G~vsp~G---~-~~~~~~~l~~G----------------~sgi~~~~~~~~~~~~~~~~~~~~~----~~~~ 57 (381)
T PRK05952 2 MKVVVTGIGLVSALG---D-LEQSWQRLLQG----------------KSGIKLHQPFPELPPLPLGLIGNQP----SSLE 57 (381)
T ss_pred CeEEEEeeEEECccc---C-HHHHHHHHHcC----------------CCCeEeCCcccccccccceeecccc----cccc
Confidence 479999999999987 4 88888766321 1333310 0100 000000000000 0112
Q ss_pred HHHHHHHHHHHHhCCCCC--CCccEEEEeccCC--------------------C--------CCC-cHHHHHHHHcCCCC
Q 014606 87 TVLFSIVQDLFSKHKINP--KSIDILITNCSVS--------------------C--------PTP-SVAAMVINKFGLKS 135 (421)
Q Consensus 87 ~la~~Aa~~aL~~ag~~~--~~Id~li~~ss~~--------------------~--------~~p-~~a~~l~~~LGl~~ 135 (421)
.++..|+++||+++|+++ +++..++-++... . .+| ..+..++..+|++
T Consensus 58 ~~~~~a~~~Al~dagl~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~~~~~- 136 (381)
T PRK05952 58 DLTKTVVTAALKDAGLTPPLTDCGVVIGSSRGCQGQWEKLARQMYQGDDSPDEELDLENWLDTLPHQAAIAAARQIGTQ- 136 (381)
T ss_pred HHHHHHHHHHHHhcCCCCCCCCEEEEEeeCcchHHHHHHHHHHHhhcCCccccccCHHHHHHhcccHHHHHHHHHhCCC-
Confidence 366789999999999964 4555443222110 0 112 2467889999997
Q ss_pred CceeeeeeCCcchHHHHHHHHHHHHHHccCCCeEEEEEecc-ccCC----C-----------ccC-CCccchhhhccccc
Q 014606 136 NVRSFHLSGMGCSAGILSISLAKDLLRVQKNSLALVLSMES-VSSN----G-----------YQG-KVKYMQLANCLFRM 198 (421)
Q Consensus 136 ~~~~~~i~~~~C~g~~~al~~A~~li~~g~~~~vLvv~~e~-~s~~----~-----------~~~-~d~~~~~~~~lfGD 198 (421)
.+.+.+. .+|++++.||..|.++|++|..+.+||.++|. .+.. + .+. .++ ..+++||
T Consensus 137 -Gp~~ti~-~aCasg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~rPfd~~r----~G~v~gE 210 (381)
T PRK05952 137 -GPVLAPM-AACATGLWAIAQGVELIQTGQCQRVIAGAVEAPITPLTLAGFQQMGALAKTGAYPFDRQR----EGLVLGE 210 (381)
T ss_pred -Ccccccc-chhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCcCCCCCCCCCCCC----CCccccc
Confidence 5889999 59999999999999999999999999999996 3321 0 000 122 3678999
Q ss_pred CcEEEEEecCCccccccceeeee-eeeeeecCCCccceeeeeeccCCCcceeeeChhhhHHHHHHHHHHHHHhhhhccch
Q 014606 199 GGAGILLSNKKEDRQRAKYELQH-LVRTHLGSKDTAYKCVFQEHDDEGFTGVSLSRSILQVAGEALKANMATLAAMVLPY 277 (421)
Q Consensus 199 GAaA~lL~~~~~~~~~~~~~~~~-~~~~~~~t~~~~~~~~~~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~ 277 (421)
||+++||++.+.... .+..+.. +......+|+... .. .+ |. .
T Consensus 211 Gaa~lvLe~~~~A~~-rg~~i~a~I~g~~~~~d~~~~---~~-----------~~---~~--~----------------- 253 (381)
T PRK05952 211 GGAILVLESAELAQK-RGAKIYGQILGFGLTCDAYHM---SA-----------PE---PD--G----------------- 253 (381)
T ss_pred cEEEEEEeeHHHHHh-CCCceEEEEEEEEecCCCCCC---CC-----------CC---CC--H-----------------
Confidence 999999998643211 0111111 1112222222110 00 00 00 0
Q ss_pred hHHHHHHHHhhhhhcCCCCCCCCCCCCCccccccEEEecCCCHHHH-----HHHHHHCCCChhhhHHHHHHHhccCCCcc
Q 014606 278 SELVWYAVSVTWKKIWPPGRKRGPYIPDFRKAFEHFCVHAGGKAVI-----DAIKENLKLKDRDVEASKTTLYRFGNTSS 352 (421)
Q Consensus 278 ~~~~~~~~~~i~~~l~~~gl~~~~~~~~~~~did~~i~Hq~~~~~~-----~~i~~~lgl~~~~~~~s~~~l~~~Gn~~s 352 (421)
....+.+.++|+++|+++ +|||++..|-.+-..- +.+.+.++- ++.- ..+-..+||+.+
T Consensus 254 ----~~~~~ai~~Al~~agi~p--------~dId~i~~hgtgt~~~D~~E~~al~~~fg~---~~~v-~s~K~~~GH~~~ 317 (381)
T PRK05952 254 ----KSAIAAIQQCLARSGLTP--------EDIDYIHAHGTATRLNDQREANLIQALFPH---RVAV-SSTKGATGHTLG 317 (381)
T ss_pred ----HHHHHHHHHHHHHhCCCH--------HHeeEEEccCCCCCCCcHHHHHHHHHHcCC---CCee-ecchhhhccChH
Confidence 001233456677889984 8999999997665443 344555552 2210 134456899999
Q ss_pred chHHHHHHHH---HHcCCCCC---------------------CCeEEEEeecccccccceeee
Q 014606 353 SSVWYELSYL---EAKGKVKK---------------------GDKIWQLAFGSGFKCNSAVWK 391 (421)
Q Consensus 353 asi~i~L~~~---~~~g~~~~---------------------Gd~vll~~~G~G~~~~~~llr 391 (421)
|+-.+.+..+ ++++.+.| =++++..+||-|..-++++|+
T Consensus 318 AaG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~v~~~~~~~~~~~l~~s~gfGG~na~lvl~ 380 (381)
T PRK05952 318 ASGALGVAFSLLALRHQQLPPCVGLQEPEFDLNFVRQAQQSPLQNVLCLSFGFGGQNAAIALG 380 (381)
T ss_pred HHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcCCCcccCCCCEEEEeeecCCCeeEEEEEe
Confidence 9977777653 44554432 245788889988888888875
No 95
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=99.29 E-value=1.1e-10 Score=118.19 Aligned_cols=94 Identities=18% Similarity=0.247 Sum_probs=82.5
Q ss_pred HHHHHHHHHHHHHHh-CCCCCCCccEEEEecc-C-CCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHH
Q 014606 85 LKTVLFSIVQDLFSK-HKINPKSIDILITNCS-V-SCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLL 161 (421)
Q Consensus 85 ~~~la~~Aa~~aL~~-ag~~~~~Id~li~~ss-~-~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li 161 (421)
+.+|+.+|++++|++ +|+++++||.|++++. + ....+..+..++..+|++.+++++.|+ .+|+++..|+..|...|
T Consensus 26 ~~~L~~~a~~~al~~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~vP~~tV~-~aCaSG~~Ai~~A~~~I 104 (401)
T PRK09050 26 ADDLGAVPLKALMARNPGVDWEAVDDVIYGCANQAGEDNRNVARMSALLAGLPVSVPGTTIN-RLCGSGMDAVGTAARAI 104 (401)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccchHHHHHHHHcCCCCCCceEEEe-cccccHHHHHHHHHHHH
Confidence 458999999999996 7999999999999763 2 222356778899999998679999999 59999999999999999
Q ss_pred HccCCCeEEEEEeccccC
Q 014606 162 RVQKNSLALVLSMESVSS 179 (421)
Q Consensus 162 ~~g~~~~vLvv~~e~~s~ 179 (421)
++|..+.+|+++.|.+|.
T Consensus 105 ~sG~~dvvlagGvEsmS~ 122 (401)
T PRK09050 105 KAGEAELMIAGGVESMSR 122 (401)
T ss_pred HCCCCCEEEEeccccccc
Confidence 999999999999999875
No 96
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=99.27 E-value=1e-09 Score=111.13 Aligned_cols=207 Identities=15% Similarity=0.075 Sum_probs=133.1
Q ss_pred CcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHHccCCCeEEEEEeccccCCC---------------ccC-
Q 014606 121 PSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLRVQKNSLALVLSMESVSSNG---------------YQG- 184 (421)
Q Consensus 121 p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~~g~~~~vLvv~~e~~s~~~---------------~~~- 184 (421)
+..+..|+..||++ .+++.+. .+|++++.||..|..+|++|..++|||+++|..+... ++.
T Consensus 137 ~~~a~~ia~~lgl~--Gp~~~i~-~acas~~~Al~~A~~~I~~G~~d~vlvgg~d~~~~~~~~~~~~~~~l~~~~~~Pfd 213 (392)
T PRK09185 137 GSLADFLRAYLGLS--GPAYTIS-TACSSSAKVFASARRLLEAGLCDAAIVGGVDSLCRLTLNGFNSLESLSPQPCRPFS 213 (392)
T ss_pred cHHHHHHHHHhCCC--CCccccc-ChhHHHHHHHHHHHHHHHcCCCCEEEEeeccccChHHHHHHHhccccCCCccCCCc
Confidence 35788999999997 4889999 5999999999999999999999999999999644320 000
Q ss_pred CCccchhhhcccccCcEEEEEecCCccccccceeeeeeeeeeecCCCccceeeeeeccCCCcceeeeChhhhHHHHHHHH
Q 014606 185 KVKYMQLANCLFRMGGAGILLSNKKEDRQRAKYELQHLVRTHLGSKDTAYKCVFQEHDDEGFTGVSLSRSILQVAGEALK 264 (421)
Q Consensus 185 ~d~~~~~~~~lfGDGAaA~lL~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~g~~~~~l~~~~p~~~~~~~~ 264 (421)
.++ ..+++||||+++||++.... ..++.+ .-..+|+.. ...+ .|. +..
T Consensus 214 ~~~----~G~~~gEGaa~vVLe~~~~~----~~~I~g---~g~~~d~~~---~~~~--------------~~~--~~~-- 261 (392)
T PRK09185 214 ANR----DGINIGEAAAFFLLEREDDA----AVALLG---VGESSDAHH---MSAP--------------HPE--GLG-- 261 (392)
T ss_pred CCC----CccceeceEEEEEEEEcCCC----cEEEEE---EEEeCCCCC---CCCC--------------CCC--HHH--
Confidence 122 35789999999999987322 123322 211222210 0000 010 000
Q ss_pred HHHHHhhhhccchhHHHHHHHHhhhhhcCCCCCCCCCCCCCccccccEEEecCCCHHH-----HHHHHHHCCCChhhhHH
Q 014606 265 ANMATLAAMVLPYSELVWYAVSVTWKKIWPPGRKRGPYIPDFRKAFEHFCVHAGGKAV-----IDAIKENLKLKDRDVEA 339 (421)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~gl~~~~~~~~~~~did~~i~Hq~~~~~-----~~~i~~~lgl~~~~~~~ 339 (421)
..+.+.+++.++|+++ +|||++..|-.+-.. ...+.+.++-.. .+.
T Consensus 262 -------------------~~~a~~~Al~~Agl~~--------~dId~v~~hgtgt~~~D~~E~~al~~~f~~~~-pv~- 312 (392)
T PRK09185 262 -------------------AILAMQQALADAGLAP--------ADIGYINLHGTATPLNDAMESRAVAAVFGDGV-PCS- 312 (392)
T ss_pred -------------------HHHHHHHHHHHcCCCH--------HHccEEEeCCCCCcCCCHHHHHHHHHHhCCCC-cee-
Confidence 0123446677789984 999999999876542 344555665321 121
Q ss_pred HHHHHhccCCCccchHHHHHHHH---HHcCCCC------------------------CCCeEEEEeecccccccceeeee
Q 014606 340 SKTTLYRFGNTSSSSVWYELSYL---EAKGKVK------------------------KGDKIWQLAFGSGFKCNSAVWKC 392 (421)
Q Consensus 340 s~~~l~~~Gn~~sasi~i~L~~~---~~~g~~~------------------------~Gd~vll~~~G~G~~~~~~llr~ 392 (421)
.+=..+||+.+|+-.+.+... +++|.+. +-++++.-+||-|..-++++|+.
T Consensus 313 --s~K~~~Gh~~~AaG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~gfgG~n~~lvl~~ 390 (392)
T PRK09185 313 --STKGLTGHTLGAAGAVEAAICWLALRHGLPPHGWNTGQPDPALPPLYLVENAQALAIRYVLSNSFAFGGNNCSLIFGR 390 (392)
T ss_pred --CCCcccccChhhcchHHHHHHHHHHhcCCCCCCCCCCCCCCCCCccccCCCCccCCCCEEEEeCccCCceeEEEEEEe
Confidence 233458999999877666543 3333321 12567888999998889998875
Q ss_pred e
Q 014606 393 I 393 (421)
Q Consensus 393 ~ 393 (421)
.
T Consensus 391 ~ 391 (392)
T PRK09185 391 A 391 (392)
T ss_pred C
Confidence 3
No 97
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.26 E-value=7.2e-10 Score=112.62 Aligned_cols=310 Identities=15% Similarity=0.123 Sum_probs=178.2
Q ss_pred CceEEEEeeeecCCCCCccCHHHHHHHHHHcC-CCChHHHHHHHHHHHH-cCCCCceecC-CCCCCCCCCCC--hHHHHH
Q 014606 9 KRVYLVDFICYKAPESLRAPISAFIEHTERSG-TFDSKAVEFQTKVLER-SGVGNETCLP-CGTHLLPADGS--LNSSME 83 (421)
Q Consensus 9 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~-~~~~~~~~~~~~i~~~-~GI~~R~~~~-~~~~~~~~~~s--~~~~~~ 83 (421)
+.|.|.|+|...|-- .+.+++.+.+..-. .+.+ +.+ ++. .++..+.... ++. ..+.... ......
T Consensus 2 ~~VvITG~g~vtp~G---~~~~~~~~~L~~g~s~i~~-----~~~-~~~~~~~~~~~~~~v~~~-~~~~~~~~~~~r~~~ 71 (405)
T PRK09116 2 RRVVVTGMGGVTALG---EDWQTIAARLKAGRNAVRR-----MPE-WDRYDGLNTRLAAPIDDF-ELPAHYTRKKIRSMG 71 (405)
T ss_pred CCEEEEeeEEECCCC---CCHHHHHHHHHcCCCCEEe-----CCc-hhhccCCCCceEEEecCc-ChhHhcCHHHHhhCC
Confidence 579999999999986 88999998774210 0000 000 000 1222222111 110 0000000 000011
Q ss_pred HHHHHHHHHHHHHHHhCCCCC------CCccEEEEecc-CC-----------------C--------CCC-cHHHHHHHH
Q 014606 84 ELKTVLFSIVQDLFSKHKINP------KSIDILITNCS-VS-----------------C--------PTP-SVAAMVINK 130 (421)
Q Consensus 84 ~~~~la~~Aa~~aL~~ag~~~------~~Id~li~~ss-~~-----------------~--------~~p-~~a~~l~~~ 130 (421)
....|++.|+++||+++|+.. +++ .++++++ .. . .+| ..+.+|+..
T Consensus 72 ~~~~~al~aa~~Al~dAGl~~~~~~~~~r~-Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~ 150 (405)
T PRK09116 72 RVSLMATRASELALEDAGLLGDPILTDGRM-GIAYGSSTGSTDPIGAFGTMLLEGSMSGITATTYVRMMPHTTAVNVGLF 150 (405)
T ss_pred HHHHHHHHHHHHHHHHcCCCCccccCCCcE-EEEEeecccchHHHHHHHHHHhhcCccccChhhhhhhcccHHHHHHHHH
Confidence 235799999999999999832 233 3444432 10 0 122 257889999
Q ss_pred cCCCCCceeeeeeCCcchHHHHHHHHHHHHHHccCCCeEEEEEeccccCC----C---c-------------cC--CCcc
Q 014606 131 FGLKSNVRSFHLSGMGCSAGILSISLAKDLLRVQKNSLALVLSMESVSSN----G---Y-------------QG--KVKY 188 (421)
Q Consensus 131 LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~~g~~~~vLvv~~e~~s~~----~---~-------------~~--~d~~ 188 (421)
+|++ .+.+.+. .+|++++.||..|..+|++|..+.+||.++|..+.. + . .+ .++
T Consensus 151 ~~~~--Gp~~ti~-~acas~~~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~f~~l~~~~~~~~~~~~~~rPfd~~~- 226 (405)
T PRK09116 151 FGLK--GRVIPTS-SACTSGSQGIGYAYEAIKYGYQTVMLAGGAEELCPTEAAVFDTLFATSTRNDAPELTPRPFDANR- 226 (405)
T ss_pred hCCC--CCccccc-chhhhHHHHHHHHHHHHHcCCCCEEEEecchhcChHHHHHHHHhhhhccCCCCCCCCCCCCcCCC-
Confidence 9997 5889999 599999999999999999999999999999974421 0 0 00 122
Q ss_pred chhhhcccccCcEEEEEecCCccccccceeeee-eeeeeecCCCccceeeeeeccCCCcceeeeChhhhHHHHHHHHHHH
Q 014606 189 MQLANCLFRMGGAGILLSNKKEDRQRAKYELQH-LVRTHLGSKDTAYKCVFQEHDDEGFTGVSLSRSILQVAGEALKANM 267 (421)
Q Consensus 189 ~~~~~~lfGDGAaA~lL~~~~~~~~~~~~~~~~-~~~~~~~t~~~~~~~~~~~~~~~g~~~~~l~~~~p~~~~~~~~~~~ 267 (421)
..+++|+||+++||++.+.... .+.++.. +......+|+.+ +. .|.. ..
T Consensus 227 ---~G~v~gEGa~~~vLe~~~~A~~-rga~i~a~i~g~~~~~d~~~-----------------~~--~p~~--~~----- 276 (405)
T PRK09116 227 ---DGLVIGEGAGTLVLEELEHAKA-RGATIYAEIVGFGTNSDGAH-----------------VT--QPQA--ET----- 276 (405)
T ss_pred ---CCEeeeccEEEEEEccHHHHHh-CCCceEEEEEEEEEcCCCCc-----------------CC--CCCH--HH-----
Confidence 3678999999999997543211 0111111 111222222110 00 0100 00
Q ss_pred HHhhhhccchhHHHHHHHHhhhhhcCCCCCCCCCCCCCccccccEEEecCCCH-----HHHHHHHHHCCCChhhhHHHHH
Q 014606 268 ATLAAMVLPYSELVWYAVSVTWKKIWPPGRKRGPYIPDFRKAFEHFCVHAGGK-----AVIDAIKENLKLKDRDVEASKT 342 (421)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~gl~~~~~~~~~~~did~~i~Hq~~~-----~~~~~i~~~lgl~~~~~~~s~~ 342 (421)
..+.|.++|.++|+++ +|||++.+|-.+- .-.+.+.+.+|-. -.+ -.
T Consensus 277 ----------------~~~ai~~AL~~Agi~p--------~dId~I~~Hgtgt~~~D~~E~~Ai~~~fg~~-~pv---~s 328 (405)
T PRK09116 277 ----------------MQIAMELALKDAGLAP--------EDIGYVNAHGTATDRGDIAESQATAAVFGAR-MPI---SS 328 (405)
T ss_pred ----------------HHHHHHHHHHHhCCCH--------HHcCEEECcCccCCCCCHHHHHHHHHHhCCC-Cee---EC
Confidence 0123446677789984 9999999997544 4445566777621 112 13
Q ss_pred HHhccCCCccchHHHHHHH---HHHcCCCC-------------------------CCCeEEEEeecccccccceeee
Q 014606 343 TLYRFGNTSSSSVWYELSY---LEAKGKVK-------------------------KGDKIWQLAFGSGFKCNSAVWK 391 (421)
Q Consensus 343 ~l~~~Gn~~sasi~i~L~~---~~~~g~~~-------------------------~Gd~vll~~~G~G~~~~~~llr 391 (421)
+-..+||+.+|+-.+.+.. ++++|.+. +.+.+|..+||-|..-++++|+
T Consensus 329 ~K~~~GH~~~AaG~~~~~~~~~~l~~~~ippt~~~~~~~~~~~~l~~v~~~~~~~~~~~~l~nsfGfGG~n~~lvl~ 405 (405)
T PRK09116 329 LKSYFGHTLGACGALEAWMSIEMMNEGWFAPTLNLTQVDPACGALDYIMGEAREIDTEYVMSNNFAFGGINTSLIFK 405 (405)
T ss_pred cchhhcccHHHHHHHHHHHHHHHHHcCccCCCCCCCCCCCCCcccCccCCCCccCCCCEEEEeeecCCcccEEEEEC
Confidence 3456899977766554443 33333321 1345788899988888888874
No 98
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=99.25 E-value=2.5e-10 Score=116.72 Aligned_cols=251 Identities=13% Similarity=0.064 Sum_probs=155.7
Q ss_pred HHHHHHHHHHHHHHhCCCC-CCCccE----EEEecc-CCC-----------------C----C-----CcHHHHHHHHcC
Q 014606 85 LKTVLFSIVQDLFSKHKIN-PKSIDI----LITNCS-VSC-----------------P----T-----PSVAAMVINKFG 132 (421)
Q Consensus 85 ~~~la~~Aa~~aL~~ag~~-~~~Id~----li~~ss-~~~-----------------~----~-----p~~a~~l~~~LG 132 (421)
..+|+..|+++||+++|++ +++++. +++.++ ... . . -..+.+|+..+|
T Consensus 77 ~~~l~~~aa~~Al~dAGl~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~ 156 (421)
T PTZ00050 77 ATHFAMAAAREALADAKLDILSEKDQERIGVNIGSGIGSLADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVAIKHK 156 (421)
T ss_pred HHHHHHHHHHHHHHHcCCCcccccCcccEEEEEccCcccHHHHHHHHHHHHhcCcCcCCHHHHHhhhhhHHHHHHHHHhC
Confidence 4679999999999999998 665543 333332 110 0 0 124678889999
Q ss_pred CCCCceeeeeeCCcchHHHHHHHHHHHHHHccCCCeEEEEEeccccCC-----------C----c-------c--CCCcc
Q 014606 133 LKSNVRSFHLSGMGCSAGILSISLAKDLLRVQKNSLALVLSMESVSSN-----------G----Y-------Q--GKVKY 188 (421)
Q Consensus 133 l~~~~~~~~i~~~~C~g~~~al~~A~~li~~g~~~~vLvv~~e~~s~~-----------~----~-------~--~~d~~ 188 (421)
++ .+++.+. .+|++++.||..|..+|++|..+.+||+++|..... + . . ..++
T Consensus 157 l~--Gp~~ti~-~aCaSg~~Al~~A~~~I~~G~~d~~lvgG~e~~~~p~~~~~f~~~~~l~~~~~~~p~~~~~pfd~~~- 232 (421)
T PTZ00050 157 LK--GPSGSAV-TACATGAHCIGEAFRWIKYGEADIMICGGTEASITPVSFAGFSRMRALCTKYNDDPQRASRPFDKDR- 232 (421)
T ss_pred CC--Ccccccc-cHhHHHHHHHHHHHHHHHcCCCCEEEECcccccCCHHHHHHHHhhhccccCcCCCCCccCCCCcCCC-
Confidence 96 5889999 599999999999999999999999999999963210 0 0 0 0122
Q ss_pred chhhhcccccCcEEEEEecCCccccccceeeee-eeeeeecCCCccceeeeeeccCCCcceeeeChhhhHHHHHHHHHHH
Q 014606 189 MQLANCLFRMGGAGILLSNKKEDRQRAKYELQH-LVRTHLGSKDTAYKCVFQEHDDEGFTGVSLSRSILQVAGEALKANM 267 (421)
Q Consensus 189 ~~~~~~lfGDGAaA~lL~~~~~~~~~~~~~~~~-~~~~~~~t~~~~~~~~~~~~~~~g~~~~~l~~~~p~~~~~~~~~~~ 267 (421)
..++.||||+|+||++.+.... .+..+.. +......+|+.. +..+ .|. +.
T Consensus 233 ---~G~~~gEGAaalvLe~~~~A~~-~g~~i~a~i~g~~~~~d~~~---~~~p--------------~~~--~~------ 283 (421)
T PTZ00050 233 ---AGFVMGEGAGILVLEELEHALR-RGAKIYAEIRGYGSSSDAHH---ITAP--------------HPD--GR------ 283 (421)
T ss_pred ---CCEeeccceEEEEEeeHHHHHH-CCCeEEEEEEEEEEcCCCCC---CCCC--------------CCC--hH------
Confidence 3568899999999998654321 0111111 111211222100 0000 010 00
Q ss_pred HHhhhhccchhHHHHHHHHhhhhhcCC-CCCCCCCCCCCccccccEEEecCCCHHHH-----HHHHHHCCCCh-hhhHHH
Q 014606 268 ATLAAMVLPYSELVWYAVSVTWKKIWP-PGRKRGPYIPDFRKAFEHFCVHAGGKAVI-----DAIKENLKLKD-RDVEAS 340 (421)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~i~~~l~~-~gl~~~~~~~~~~~did~~i~Hq~~~~~~-----~~i~~~lgl~~-~~~~~s 340 (421)
...+.|.++|++ +|+++ +|||++-.|-.+...- +.+.+.++-.. +.+.-
T Consensus 284 ---------------~~~~ai~~Al~~~Agi~~--------~dId~ie~hgtgt~~~D~~E~~al~~~~~~~~~~~~~v- 339 (421)
T PTZ00050 284 ---------------GARRCMENALKDGANINI--------NDVDYVNAHATSTPIGDKIELKAIKKVFGDSGAPKLYV- 339 (421)
T ss_pred ---------------HHHHHHHHHHHhccCCCh--------hhCCEEECCCccCCCCCHHHHHHHHHHhccccCCCceE-
Confidence 011345567788 89984 9999999998765332 34555555321 22210
Q ss_pred HHHHhccCCCccchHHHHHHHH---HHcCCCCC--------------------------CCeEEEEeecccccccceeee
Q 014606 341 KTTLYRFGNTSSSSVWYELSYL---EAKGKVKK--------------------------GDKIWQLAFGSGFKCNSAVWK 391 (421)
Q Consensus 341 ~~~l~~~Gn~~sasi~i~L~~~---~~~g~~~~--------------------------Gd~vll~~~G~G~~~~~~llr 391 (421)
-.+-..+||+.+|+-.+.|... ++++.+.| =..++..+||-|.+-++++|+
T Consensus 340 ~s~K~~~GH~~~AaG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~nsfgfgG~n~~lvl~ 419 (421)
T PTZ00050 340 SSTKGGLGHLLGAAGAVESIVTILSLYEQIIPPTINLENPDAECDLNLVQGKTAHPLQSIDAVLSTSFGFGGVNTALLFT 419 (421)
T ss_pred ECccccccccHHHHHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCccccCCcccCcCCCCCEEEEeeecCCCeeEEEEEe
Confidence 1233468999999887777653 44443311 146788899999888888886
Q ss_pred e
Q 014606 392 C 392 (421)
Q Consensus 392 ~ 392 (421)
.
T Consensus 420 ~ 420 (421)
T PTZ00050 420 K 420 (421)
T ss_pred C
Confidence 3
No 99
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=99.25 E-value=1.7e-10 Score=116.65 Aligned_cols=94 Identities=20% Similarity=0.293 Sum_probs=82.9
Q ss_pred HHHHHHHHHHHHHHh-CCCCCCCccEEEEec-c-CCCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHH
Q 014606 85 LKTVLFSIVQDLFSK-HKINPKSIDILITNC-S-VSCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLL 161 (421)
Q Consensus 85 ~~~la~~Aa~~aL~~-ag~~~~~Id~li~~s-s-~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li 161 (421)
+.+|+.+|++++|++ +++++++||.+++++ . .....+..+..++..+|++.+++++.|+ .+|++++.|+..|...|
T Consensus 25 ~~~L~~~a~~~al~~~a~i~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~~p~~~V~-~~CaSG~~Ai~~a~~~I 103 (400)
T TIGR02430 25 ADDLAAVPIKALLARNPQLDWAAIDDVIYGCANQAGEDNRNVARMAALLAGLPVSVPGTTVN-RLCGSGLDAIGMAARAI 103 (400)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCceEEee-chhhhHHHHHHHHHHHH
Confidence 458999999999996 699999999999975 2 2322366788899999998679999999 59999999999999999
Q ss_pred HccCCCeEEEEEeccccC
Q 014606 162 RVQKNSLALVLSMESVSS 179 (421)
Q Consensus 162 ~~g~~~~vLvv~~e~~s~ 179 (421)
++|..+.+|+++.|.+|.
T Consensus 104 ~sG~~d~~la~G~E~ms~ 121 (400)
T TIGR02430 104 KAGEADLLIAGGVESMSR 121 (400)
T ss_pred HCCCCCEEEEeccccccC
Confidence 999999999999999875
No 100
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=99.25 E-value=9.8e-10 Score=112.78 Aligned_cols=251 Identities=14% Similarity=0.097 Sum_probs=149.8
Q ss_pred HHHHHHHHHHHHHHhCCCCC-----CCccEEEEeccC-CC-----------------C--------CC-cHHHHHHHHcC
Q 014606 85 LKTVLFSIVQDLFSKHKINP-----KSIDILITNCSV-SC-----------------P--------TP-SVAAMVINKFG 132 (421)
Q Consensus 85 ~~~la~~Aa~~aL~~ag~~~-----~~Id~li~~ss~-~~-----------------~--------~p-~~a~~l~~~LG 132 (421)
...|+..|+.+||+++|+++ .+...++++++. .. . .+ ..+.+|+..+|
T Consensus 93 ~~~~~~~aa~~Al~dAg~~~~~~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~g 172 (437)
T PLN02836 93 FIGYALCAADEALSDARWLPSEDEAKERTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPRILINMAAGHVSIRYG 172 (437)
T ss_pred HHHHHHHHHHHHHHHcCCCcccccCCcCEEEEEeeccCcHHHHHHHHHHHHhcCCCCCChhhhhhhcccHHHHHHHHHhC
Confidence 45799999999999999854 235567776421 10 0 11 24678999999
Q ss_pred CCCCceeeeeeCCcchHHHHHHHHHHHHHHccCCCeEEEEEeccccCC-----------C-----------ccC--CCcc
Q 014606 133 LKSNVRSFHLSGMGCSAGILSISLAKDLLRVQKNSLALVLSMESVSSN-----------G-----------YQG--KVKY 188 (421)
Q Consensus 133 l~~~~~~~~i~~~~C~g~~~al~~A~~li~~g~~~~vLvv~~e~~s~~-----------~-----------~~~--~d~~ 188 (421)
++ .+++.+. .+|++++.||..|..+|++|..+.+||.++|..... + .++ .++
T Consensus 173 l~--Gp~~tv~-~acaSg~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~pfd~~~- 248 (437)
T PLN02836 173 FQ--GPNHAAV-TACATGAHSIGDAFRMIQFGDADVMVAGGTESSIDALSIAGFSRSRALSTKFNSCPTEASRPFDCDR- 248 (437)
T ss_pred CC--Cceecee-ChhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHHhhhhhcccCCCcccccCCcccCC-
Confidence 86 6899999 599999999999999999999999999998863210 0 000 112
Q ss_pred chhhhcccccCcEEEEEecCCccccccceeeee-eeeeeecCCCccceeeeeeccCCCcceeeeChhhhHHHHHHHHHHH
Q 014606 189 MQLANCLFRMGGAGILLSNKKEDRQRAKYELQH-LVRTHLGSKDTAYKCVFQEHDDEGFTGVSLSRSILQVAGEALKANM 267 (421)
Q Consensus 189 ~~~~~~lfGDGAaA~lL~~~~~~~~~~~~~~~~-~~~~~~~t~~~~~~~~~~~~~~~g~~~~~l~~~~p~~~~~~~~~~~ 267 (421)
..++.||||+++||++.+..... +..+.. +...-..+++. .+. .|....
T Consensus 249 ---~G~~~gEGaaalVLe~~~~A~~~-g~~i~a~I~g~~~~~d~~-----------------~~~--~p~~~~------- 298 (437)
T PLN02836 249 ---DGFVIGEGAGVLVLEELEHAKRR-GAKIYAEVRGYGMSGDAH-----------------HIT--QPHEDG------- 298 (437)
T ss_pred ---CCeeeecCEEEEEEeeHHHHHHC-CCceEEEEEeeeecCCCC-----------------CCc--CCCcch-------
Confidence 36789999999999986533210 011101 11111112210 000 010000
Q ss_pred HHhhhhccchhHHHHHHHHhhhhhcCCCCCCCCCCCCCccccccEEEecCCCHHHH-----HHHHHHCCCCh--hhhHHH
Q 014606 268 ATLAAMVLPYSELVWYAVSVTWKKIWPPGRKRGPYIPDFRKAFEHFCVHAGGKAVI-----DAIKENLKLKD--RDVEAS 340 (421)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~gl~~~~~~~~~~~did~~i~Hq~~~~~~-----~~i~~~lgl~~--~~~~~s 340 (421)
....+.+.++++++|+++ +|||++-.|-.+-..- +.+.+.++-.. ..+.-
T Consensus 299 --------------~~~~~a~~~Al~~Agi~~--------~dId~ve~hgtgt~~~D~~E~~ai~~~~~~~~~~~~~~v- 355 (437)
T PLN02836 299 --------------RGAVLAMTRALQQSGLHP--------NQVDYVNAHATSTPLGDAVEARAIKTVFSEHATSGGLAF- 355 (437)
T ss_pred --------------HHHHHHHHHHHHHcCCCH--------hHcCEEEccCCcCcCcCHHHHHHHHHHhcccccCCCCee-
Confidence 001123456677889984 9999999997765332 23444443211 01110
Q ss_pred HHHHhccCCCccchHHHHHHH---HHHcCCCC-------------------------CCCeEEEEeecccccccceeeee
Q 014606 341 KTTLYRFGNTSSSSVWYELSY---LEAKGKVK-------------------------KGDKIWQLAFGSGFKCNSAVWKC 392 (421)
Q Consensus 341 ~~~l~~~Gn~~sasi~i~L~~---~~~~g~~~-------------------------~Gd~vll~~~G~G~~~~~~llr~ 392 (421)
-.+-..+||+.+|+-.+.+.. +++.+.+. +-..+|.-+||-|..-++++|+-
T Consensus 356 ~s~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~n~~~~~p~~~~~~~~~~~~~~~~~~~~l~nsfgfGG~na~lvl~~ 435 (437)
T PLN02836 356 SSTKGATGHLLGAAGAVEAIFSVLAIHHGIAPPTLNLERPDPIFDDGFVPLTASKAMLIRAALSNSFGFGGTNASLLFTS 435 (437)
T ss_pred ECCcccccccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcccCcccCCCCCCccEEEEecccCCCeeEEEEEec
Confidence 022345799988876665443 34444321 11335566899888888888864
No 101
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=99.24 E-value=6.3e-10 Score=112.90 Aligned_cols=280 Identities=10% Similarity=0.051 Sum_probs=159.8
Q ss_pred CceEEEEeeeecCCCCCccCHHHHHHHHHHcC-CCChHHHHHHHHHHHHcCCCCceec-CCCCCCCCCCCCh--HHHHHH
Q 014606 9 KRVYLVDFICYKAPESLRAPISAFIEHTERSG-TFDSKAVEFQTKVLERSGVGNETCL-PCGTHLLPADGSL--NSSMEE 84 (421)
Q Consensus 9 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~-~~~~~~~~~~~~i~~~~GI~~R~~~-~~~~~~~~~~~s~--~~~~~~ 84 (421)
++|.|.|+|...|.- .+.+++.+.+..-. .+.+ +++ +...+...+.-. .++... ....+. ......
T Consensus 1 ~~VvItG~G~vsp~G---~~~~~~w~~L~~G~s~i~~-----~~~-~~~~~~~~~~~g~i~~~~~-~~~~~~~~~~~~d~ 70 (399)
T cd00832 1 RRAVVTGIGVVAPNG---LGVEEYWKAVLDGRSGLGP-----ITR-FDPSGYPARLAGEVPDFDA-AEHLPGRLLPQTDR 70 (399)
T ss_pred CCEEEEeeEEeCCCC---CCHHHHHHHHHhCCCeEee-----CCc-cccccCCCceeEEeCCcCh-hhcCCHHHHhhCCH
Confidence 368999999999986 78899998774310 0100 000 000111111000 000000 000000 001112
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcc----EEEEecc-CC-----------------CCC---------CcHHHHHHHHcCC
Q 014606 85 LKTVLFSIVQDLFSKHKINPKSID----ILITNCS-VS-----------------CPT---------PSVAAMVINKFGL 133 (421)
Q Consensus 85 ~~~la~~Aa~~aL~~ag~~~~~Id----~li~~ss-~~-----------------~~~---------p~~a~~l~~~LGl 133 (421)
...|+..|+++||+++|+++++++ .|++.++ .. ... -..+.+|+..+|+
T Consensus 71 ~~~~~l~aa~eAl~dAGl~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (399)
T cd00832 71 MTRLALAAADWALADAGVDPAALPPYDMGVVTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQISIRHGM 150 (399)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCceEEEEccCCccHHHHHHHHHHHHhcCccccChhhhhhhhhhHHHHHHHHHhCC
Confidence 357999999999999999765443 3455432 11 000 1246789999999
Q ss_pred CCCceeeeeeCCcchHHHHHHHHHHHHHHccCCCeEEEEEeccccCC-----------Cc----------cC-CCccchh
Q 014606 134 KSNVRSFHLSGMGCSAGILSISLAKDLLRVQKNSLALVLSMESVSSN-----------GY----------QG-KVKYMQL 191 (421)
Q Consensus 134 ~~~~~~~~i~~~~C~g~~~al~~A~~li~~g~~~~vLvv~~e~~s~~-----------~~----------~~-~d~~~~~ 191 (421)
+ .+++.+. .+|++++.||..|.++|++|. +.+|+.++|..... +. +. .++
T Consensus 151 ~--Gp~~ti~-~acaS~~~Al~~A~~~i~~G~-d~~i~gg~d~~~~p~~~~~~~~~~~ls~~~~p~~~~rPFd~~~---- 222 (399)
T cd00832 151 R--GPSGVVV-AEQAGGLDALAQARRLVRRGT-PLVVSGGVDSALCPWGWVAQLSSGRLSTSDDPARAYLPFDAAA---- 222 (399)
T ss_pred C--CCccccc-chhHHHHHHHHHHHHHHHcCC-CeEEEEeeccccCHHHHHHHHhccccCCCCCCCCCcCCCcCCC----
Confidence 7 5889999 599999999999999999999 99999999873210 00 00 122
Q ss_pred hhcccccCcEEEEEecCCccccccceeeee-eeeeeecCCCccceeeeeeccCCCcceeeeChhhhHHHHHHHHHHHHHh
Q 014606 192 ANCLFRMGGAGILLSNKKEDRQRAKYELQH-LVRTHLGSKDTAYKCVFQEHDDEGFTGVSLSRSILQVAGEALKANMATL 270 (421)
Q Consensus 192 ~~~lfGDGAaA~lL~~~~~~~~~~~~~~~~-~~~~~~~t~~~~~~~~~~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~~~ 270 (421)
..++.|+||+++||++.+.... .+.++.. +......+|+.. .... ...
T Consensus 223 ~G~~~gEGa~~lvLe~~~~A~~-rg~~i~a~i~g~~~~~d~~~-----------------~~~~-----~~~-------- 271 (399)
T cd00832 223 AGYVPGEGGAILVLEDAAAARE-RGARVYGEIAGYAATFDPPP-----------------GSGR-----PPG-------- 271 (399)
T ss_pred CCEeeeceEEEEEEeeHHHHHH-CCCeEEEEEEeEEEcCCCCC-----------------CCCC-----HHH--------
Confidence 4678999999999998654321 1122211 111111122100 0000 000
Q ss_pred hhhccchhHHHHHHHHhhhhhcCCCCCCCCCCCCCccccccEEEecCCCHH-----HHHHHHHHCCCChhhhHHHHHHHh
Q 014606 271 AAMVLPYSELVWYAVSVTWKKIWPPGRKRGPYIPDFRKAFEHFCVHAGGKA-----VIDAIKENLKLKDRDVEASKTTLY 345 (421)
Q Consensus 271 ~~~~~~~~~~~~~~~~~i~~~l~~~gl~~~~~~~~~~~did~~i~Hq~~~~-----~~~~i~~~lgl~~~~~~~s~~~l~ 345 (421)
..+.|.++|.++|+++ +|||++..|-.+-. -.+.+.+.||-..-.+ ..+-.
T Consensus 272 -------------~~~a~~~al~~ag~~~--------~~i~~v~~hgtgt~~~D~~E~~al~~~fg~~~~pv---~s~K~ 327 (399)
T cd00832 272 -------------LARAIRLALADAGLTP--------EDVDVVFADAAGVPELDRAEAAALAAVFGPRGVPV---TAPKT 327 (399)
T ss_pred -------------HHHHHHHHHHHcCCCH--------HHccEEEeccCcCCCCCHHHHHHHHHHhCCCCCce---eCCCc
Confidence 1133446677789984 99999999976543 3344566666321112 12334
Q ss_pred ccCCCccchHHHHHHH
Q 014606 346 RFGNTSSSSVWYELSY 361 (421)
Q Consensus 346 ~~Gn~~sasi~i~L~~ 361 (421)
.+||+.+|+-.+.+..
T Consensus 328 ~~Gh~~~aaG~~~l~~ 343 (399)
T cd00832 328 MTGRLYAGGAPLDVAT 343 (399)
T ss_pred hhcchHHHHHHHHHHH
Confidence 5799999988887765
No 102
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=99.24 E-value=1.5e-10 Score=116.81 Aligned_cols=93 Identities=16% Similarity=0.259 Sum_probs=74.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEecc-C-CCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHH
Q 014606 85 LKTVLFSIVQDLFSKHKINPKSIDILITNCS-V-SCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLR 162 (421)
Q Consensus 85 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~ss-~-~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~ 162 (421)
..+|+.+|++++|+++|+++++||.|++++. . ....+..+....-.+|++...+.+.++ .+|+++..++..|.+.|+
T Consensus 26 ~~~L~~~a~~~al~dagl~~~~ID~vv~g~~~~~~~~~~~~~~~~~l~~gl~~~~p~~~v~-~acaSg~~Av~~Aa~~I~ 104 (382)
T PRK07801 26 PADLGAHVLKGLVDRTGIDPAAVDDVIFGCVDTIGPQAGNIARTSWLAAGLPEEVPGVTVD-RQCGSSQQAIHFAAQAVM 104 (382)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEEeeccCCcccccHHHHHHHHcCCCCCCceeeec-chhhhHHHHHHHHHHHHH
Confidence 3579999999999999999999999998753 1 111123344444457776457889999 599999999999999999
Q ss_pred ccCCCeEEEEEecccc
Q 014606 163 VQKNSLALVLSMESVS 178 (421)
Q Consensus 163 ~g~~~~vLvv~~e~~s 178 (421)
+|..+.|||++.|.++
T Consensus 105 sG~~d~vLv~G~e~ms 120 (382)
T PRK07801 105 SGTQDLVVAGGVQNMS 120 (382)
T ss_pred CCCCCEEEEcchhhhc
Confidence 9999999999998553
No 103
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=99.23 E-value=9.4e-10 Score=111.51 Aligned_cols=91 Identities=15% Similarity=0.179 Sum_probs=77.5
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEecc-CCCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHHcc
Q 014606 86 KTVLFSIVQDLFSKHKINPKSIDILITNCS-VSCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLRVQ 164 (421)
Q Consensus 86 ~~la~~Aa~~aL~~ag~~~~~Id~li~~ss-~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~~g 164 (421)
.+|+.+|++++|+++|++++|||.+++++. .++........+++.+|++ ..+.+.++ .+|++++.++..|...|++|
T Consensus 28 ~~L~~ea~~~AL~dagl~~~dID~v~vg~~~~~~~~~~~~~~~a~~lGl~-~~~~~~v~-~~c~sg~~ai~~A~~~I~sG 105 (398)
T PRK06157 28 EDLMVEAFLEALADAGIEPKDIDAAWFGTHYDEIGSGKSGTPLSRALRLP-NIPVTRVE-NFCATGSEAFRGAVYAVASG 105 (398)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchhHHHHHHcCCC-CCCEEEEe-cccHHHHHHHHHHHHHHHCC
Confidence 479999999999999999999999998763 2221122336788899998 48899999 59999999999999999999
Q ss_pred CCCeEEEEEecccc
Q 014606 165 KNSLALVLSMESVS 178 (421)
Q Consensus 165 ~~~~vLvv~~e~~s 178 (421)
..+.||++++|.++
T Consensus 106 ~~d~vlv~G~e~~s 119 (398)
T PRK06157 106 AYDIALALGVEKLK 119 (398)
T ss_pred CCCEEEEEEEeecc
Confidence 99999999999864
No 104
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=99.22 E-value=5.8e-10 Score=112.56 Aligned_cols=94 Identities=14% Similarity=0.234 Sum_probs=80.9
Q ss_pred HHHHHHHHHHHHHHh-CCCCCCCccEEEEeccCC-CC-CCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHH
Q 014606 85 LKTVLFSIVQDLFSK-HKINPKSIDILITNCSVS-CP-TPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLL 161 (421)
Q Consensus 85 ~~~la~~Aa~~aL~~-ag~~~~~Id~li~~ss~~-~~-~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li 161 (421)
+.+|+..+++++|++ +|+++++||.+++++... .. .+..+..++..+|++..++++.|+ .+|++++.|+..|..+|
T Consensus 27 ~~~L~~~~~~~al~~~agl~~~~Id~vi~g~~~~~~~~g~~~ar~~~~~~Gl~~~~p~~~V~-~~caSG~~Ai~~A~~~I 105 (387)
T PRK08947 27 AEDLSAHLMRSLLARNPALDPAEIDDIIWGCVQQTLEQGFNIARNAALLAGIPHSVPAVTVN-RLCGSSMQALHDAARAI 105 (387)
T ss_pred HHHHHHHHHHHHHHhccCcChHHhCeEEEEeccccccccccHHHHHHHHcCCCCCCcceeee-chhHHHHHHHHHHHHHH
Confidence 357999999999997 799999999999986322 22 244567788999998669999999 59999999999999999
Q ss_pred HccCCCeEEEEEeccccC
Q 014606 162 RVQKNSLALVLSMESVSS 179 (421)
Q Consensus 162 ~~g~~~~vLvv~~e~~s~ 179 (421)
++|..+.||+++.|.+|.
T Consensus 106 ~sG~~d~vlv~G~E~ms~ 123 (387)
T PRK08947 106 MTGDGDVFLIGGVEHMGH 123 (387)
T ss_pred HCCCCCEEEEcccccccc
Confidence 999999999999998764
No 105
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=99.21 E-value=1.4e-09 Score=111.25 Aligned_cols=91 Identities=15% Similarity=0.139 Sum_probs=76.1
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEeccCC-CCCCcHH-HHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHHc
Q 014606 86 KTVLFSIVQDLFSKHKINPKSIDILITNCSVS-CPTPSVA-AMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLRV 163 (421)
Q Consensus 86 ~~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~-~~~p~~a-~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~~ 163 (421)
.+|+.+|+++||+++|++++|||.+++++..+ ......+ ..++..||++ ..+++.++ .+|+++..++..|...|++
T Consensus 38 ~eL~~eA~~~Al~dagl~~~dID~vv~~~~~~~~~g~~~~~~~~~~~lGl~-~~~~~~v~-~~~aSg~~ai~~A~~~I~s 115 (430)
T PRK06365 38 RERVKKAFDYAMNDAGLTLADIDGSVASYFSDHFQRQLLAGIMVQDYLGLV-PKPSKRIE-GGGATGGLAFQAGYEEIAS 115 (430)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcCEEEEecccccccccchhhHHHHHhcCCC-CCceEEEe-CCcHHHHHHHHHHHHHHHc
Confidence 47999999999999999999999988765322 1112223 3468999998 48999999 5999999999999999999
Q ss_pred cCCCeEEEEEecccc
Q 014606 164 QKNSLALVLSMESVS 178 (421)
Q Consensus 164 g~~~~vLvv~~e~~s 178 (421)
|.++.|||+++|..+
T Consensus 116 G~~~~vLv~G~e~~s 130 (430)
T PRK06365 116 GRMDCVAVYGFETMS 130 (430)
T ss_pred CCCCEEEEEEeeecc
Confidence 999999999999754
No 106
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.20 E-value=2.6e-09 Score=108.98 Aligned_cols=316 Identities=14% Similarity=0.065 Sum_probs=183.4
Q ss_pred CCceEEEEeeeecCCCCCccCHHHHHHHHHHcC-CCChHHHHHHHHHHHHcCCCCce--ecCCCCCCCCCCCChHH--HH
Q 014606 8 SKRVYLVDFICYKAPESLRAPISAFIEHTERSG-TFDSKAVEFQTKVLERSGVGNET--CLPCGTHLLPADGSLNS--SM 82 (421)
Q Consensus 8 ~~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~-~~~~~~~~~~~~i~~~~GI~~R~--~~~~~~~~~~~~~s~~~--~~ 82 (421)
++.|.|.|+|...|-- .+.+++.+.+..-. .+.+-. ++.....++..+. +...+. . +..+... ..
T Consensus 11 ~~~VvItGig~~sp~g---~~~~~~w~~L~~G~s~i~~~~----~~~~~~~~~~~~~~g~i~~~~-d--~~~~~~~~~~~ 80 (418)
T PRK07910 11 FPNVVVTGIAMTTALA---TDAETTWKLLLDGQSGIRTLD----DPFVEEFDLPVRIGGHLLEEF-D--HQLTRVELRRM 80 (418)
T ss_pred CCCEEEEeeEEECCCC---CCHHHHHHHHHcCCCeeEeCC----hhhhhccCCCcceEEEeccCc-c--ccCCHHHHhhc
Confidence 3789999999999986 89999998875310 011000 0001112222221 111110 0 0001000 01
Q ss_pred HHHHHHHHHHHHHHHHhCCC---CCCCccEEEEeccCCC-------------------------CCC-cHHHHHHHHcCC
Q 014606 83 EELKTVLFSIVQDLFSKHKI---NPKSIDILITNCSVSC-------------------------PTP-SVAAMVINKFGL 133 (421)
Q Consensus 83 ~~~~~la~~Aa~~aL~~ag~---~~~~Id~li~~ss~~~-------------------------~~p-~~a~~l~~~LGl 133 (421)
.....++..|+++||+++|+ +++++..++-++.... .++ ..+..+...+|+
T Consensus 81 d~~~~~~l~aa~~AledAg~~~~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~ 160 (418)
T PRK07910 81 SYLQRMSTVLGRRVWENAGSPEVDTNRLMVSIGTGLGSAEELVFAYDDMRARGLRAVSPLAVQMYMPNGPAAAVGLERHA 160 (418)
T ss_pred cHHHHHHHHHHHHHHHHcCCCCCCcccEEEEEEEccCccHhHHHHHHHHHhcCcccCChhHHHHhccccHHHHHHHHhCC
Confidence 12346899999999999996 4455554443322110 011 246678888898
Q ss_pred CCCceeeeeeCCcchHHHHHHHHHHHHHHccCCCeEEEEEeccccC-C-----------Cc--c--C--------CCccc
Q 014606 134 KSNVRSFHLSGMGCSAGILSISLAKDLLRVQKNSLALVLSMESVSS-N-----------GY--Q--G--------KVKYM 189 (421)
Q Consensus 134 ~~~~~~~~i~~~~C~g~~~al~~A~~li~~g~~~~vLvv~~e~~s~-~-----------~~--~--~--------~d~~~ 189 (421)
+ .+.+.+. .+|++++.||..|.++|++|..+.+++.++|.... . +. . + .++
T Consensus 161 ~--G~~~ti~-taCaS~~~Al~~A~~~I~~G~~d~aivgg~~~~~~~~~~~~f~~~~~~ls~~~~~~~~~~rPFd~~~-- 235 (418)
T PRK07910 161 K--AGVITPV-SACASGSEAIAQAWRQIVLGEADIAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDKDR-- 235 (418)
T ss_pred C--CCccccc-chhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCccccCCCCCCCCcCCCcCCC--
Confidence 6 4778888 59999999999999999999999999999997321 1 10 0 0 112
Q ss_pred hhhhcccccCcEEEEEecCCccccccceeeee-eeeeeecCCCccceeeeeeccCCCcceeeeChhhhHHHHHHHHHHHH
Q 014606 190 QLANCLFRMGGAGILLSNKKEDRQRAKYELQH-LVRTHLGSKDTAYKCVFQEHDDEGFTGVSLSRSILQVAGEALKANMA 268 (421)
Q Consensus 190 ~~~~~lfGDGAaA~lL~~~~~~~~~~~~~~~~-~~~~~~~t~~~~~~~~~~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~ 268 (421)
..+++|||++++||++.+.... .+..+.. +......+|+... ..+ + |. +.
T Consensus 236 --~G~v~gEGaa~vvLe~~~~A~~-rg~~i~a~i~g~~~~~dg~~~---~~~-----------~---~~--~~------- 286 (418)
T PRK07910 236 --DGFVFGEGGALMVIETEEHAKA-RGANILARIMGASITSDGFHM---VAP-----------D---PN--GE------- 286 (418)
T ss_pred --CCEeeeceEEEEEEeeHHHHHh-CCCcEEEEEEEEEEecCCCCC---CCC-----------C---CC--HH-------
Confidence 4788999999999998654321 0111111 2222233332110 000 0 00 00
Q ss_pred HhhhhccchhHHHHHHHHhhhhhcCCCCCCCCCCCCCccccccEEEecCCCHH-----HHHHHHHHCCCChhhhHHHHHH
Q 014606 269 TLAAMVLPYSELVWYAVSVTWKKIWPPGRKRGPYIPDFRKAFEHFCVHAGGKA-----VIDAIKENLKLKDRDVEASKTT 343 (421)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~i~~~l~~~gl~~~~~~~~~~~did~~i~Hq~~~~-----~~~~i~~~lgl~~~~~~~s~~~ 343 (421)
...+.|.++|.++|+++ +|||++-.|-.+-. =.+.+.+.||-..-.+ ..+
T Consensus 287 --------------~~~~a~~~Al~~agi~~--------~did~ie~hgtgt~~~D~~E~~Al~~~fg~~~~~v---~s~ 341 (418)
T PRK07910 287 --------------RAGHAMTRAIELAGLTP--------GDIDHVNAHATGTSVGDVAEGKAINNALGGHRPAV---YAP 341 (418)
T ss_pred --------------HHHHHHHHHHHHhCCCH--------HHCCEEEcCCcCCCCCCHHHHHHHHHHhCCCCCce---eCc
Confidence 01233456677889984 99999999987653 3455667777321112 134
Q ss_pred HhccCCCccchHHHHHHH---HHHcCCCC------------------------CCCeEEEEeecccccccceeeee
Q 014606 344 LYRFGNTSSSSVWYELSY---LEAKGKVK------------------------KGDKIWQLAFGSGFKCNSAVWKC 392 (421)
Q Consensus 344 l~~~Gn~~sasi~i~L~~---~~~~g~~~------------------------~Gd~vll~~~G~G~~~~~~llr~ 392 (421)
-..+||+.+|+-.+.|.. ++++|.+. +-..++.-+||-|.+-.+++|+.
T Consensus 342 K~~~GH~~~AaG~~~li~~~l~l~~~~ipp~~n~~~~~p~~~l~~~~~~~~~~~~~~al~nsfGfGG~N~slvl~~ 417 (418)
T PRK07910 342 KSALGHSVGAVGAVESILTVLALRDGVIPPTLNLENLDPEIDLDVVAGEPRPGNYRYAINNSFGFGGHNVALAFGR 417 (418)
T ss_pred cccccccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcccCCCCCcCCCccEEEEeeecCCCeeEEEEEec
Confidence 466899999987766543 34444321 11346778899888888888763
No 107
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=99.19 E-value=6.7e-10 Score=111.97 Aligned_cols=94 Identities=11% Similarity=0.182 Sum_probs=79.7
Q ss_pred HHHHHHHHHHHHHHh-CCCCCCCccEEEEeccCC-CC-CCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHH
Q 014606 85 LKTVLFSIVQDLFSK-HKINPKSIDILITNCSVS-CP-TPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLL 161 (421)
Q Consensus 85 ~~~la~~Aa~~aL~~-ag~~~~~Id~li~~ss~~-~~-~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li 161 (421)
+.+|+.+|++++|++ +|+++++||.+++++... .. .+..+..+....|++..++++.|+ .+|++++.|+..|.+.|
T Consensus 25 ~~~L~~~a~~~al~~~agl~~~~Id~v~~G~~~~~~~~g~~~ar~~~~~~g~~~~~p~~tV~-~~CaSG~~Ai~~Aa~~I 103 (385)
T TIGR02445 25 AEDLSAHLMSKLLARNPKVDPAEVEDIYWGCVQQTLEQGFNIARNAALLAQIPHTSAAVTVN-RLCGSSMQALHDAARAI 103 (385)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHcCEEEEecccccccccchHHHHHHHHCCCCCCcchhhhh-hhhHHHHHHHHHHHHHH
Confidence 458999999999997 599999999999986322 11 234666666688998779999999 59999999999999999
Q ss_pred HccCCCeEEEEEeccccC
Q 014606 162 RVQKNSLALVLSMESVSS 179 (421)
Q Consensus 162 ~~g~~~~vLvv~~e~~s~ 179 (421)
++|..+.+|+++.|.+|.
T Consensus 104 ~sG~~d~vlagG~E~ms~ 121 (385)
T TIGR02445 104 MTGDADVCLVGGVEHMGH 121 (385)
T ss_pred HCCCCCEEEEeeehhccc
Confidence 999999999999998764
No 108
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.18 E-value=5.1e-09 Score=105.89 Aligned_cols=305 Identities=13% Similarity=0.022 Sum_probs=177.7
Q ss_pred cCCCCceEEEEeeeecCCCCCccCHHHHHHHHHHcC---CCChHHHHHHHHHHHHcCCCCceecCC-CCCCCCCCCChHH
Q 014606 5 RNPSKRVYLVDFICYKAPESLRAPISAFIEHTERSG---TFDSKAVEFQTKVLERSGVGNETCLPC-GTHLLPADGSLNS 80 (421)
Q Consensus 5 ~~~~~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~---~~~~~~~~~~~~i~~~~GI~~R~~~~~-~~~~~~~~~s~~~ 80 (421)
||..+.|.|.|+|...|-- .+.+++.+.+..-. .++.. .+ .....+ ...+ +....-+......
T Consensus 2 ~~~~~rVvITGiG~vsp~G---~~~e~~w~aL~~G~sg~~~~~~------~~---~~~~~~-~~~~~~~~~~~~~~~~~r 68 (398)
T PRK06519 2 RMQPNDVVITGIGLVSSLG---EGLDAHWNALSAGRPQPNVDTE------TF---APYPVH-PLPEIDWSQQIPKRGDQR 68 (398)
T ss_pred CCCCCCEEEEcceEECCCC---CCHHHHHHHHHcCCCCCCCCcc------cc---cCcCcc-cccccChhhcCCchhhhh
Confidence 5678899999999999986 89999998874311 01100 00 000000 0000 0000000000000
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCC-----CCccEEEEeccCCC-----------------------------C-------
Q 014606 81 SMEELKTVLFSIVQDLFSKHKINP-----KSIDILITNCSVSC-----------------------------P------- 119 (421)
Q Consensus 81 ~~~~~~~la~~Aa~~aL~~ag~~~-----~~Id~li~~ss~~~-----------------------------~------- 119 (421)
.......|+..|+++||+++|++. ++++.++-++.... .
T Consensus 69 ~~~r~~~~a~~Aa~~Al~dAGl~~~~~~~~r~GvivGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 148 (398)
T PRK06519 69 QMETWQRLGTYAAGLALDDAGIKGNEELLSTMDMIVAAGGGERDIAVDTAILNEARKRNDRGVLLNERLMTELRPTLFLA 148 (398)
T ss_pred ccCHHHHHHHHHHHHHHHHcCCCCCCCCccceEEEEEeCCCchhHHHhhhhhhcccchhHHHHHHHhcCCCccChhhhhh
Confidence 011245799999999999999854 24444444332110 0
Q ss_pred -CC-cHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHHccCCCeEEEEEeccccCC-----------Ccc---
Q 014606 120 -TP-SVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLRVQKNSLALVLSMESVSSN-----------GYQ--- 183 (421)
Q Consensus 120 -~p-~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~~g~~~~vLvv~~e~~s~~-----------~~~--- 183 (421)
.+ ..+..|+..+|++ -+.+.+. .+|++++.||..|.++|++|..+.+||.++|..... +..
T Consensus 149 ~~~n~~a~~is~~~gl~--Gp~~ti~-~acaSg~~Ai~~A~~~I~~G~~d~~lvGG~d~~~~~~~~~~~~~~~~ls~~~~ 225 (398)
T PRK06519 149 QLSNLLAGNISIVHKVT--GSSRTFM-GEESAGVSAIEIAFARIASGQSDHALVGGAYNAERPDMLLLYELGGLLLKGGW 225 (398)
T ss_pred hhhhHHHHHHHHHhCCC--Ccccccc-CCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHcCccCCCCC
Confidence 11 2567889999997 5889999 599999999999999999999999999999862211 000
Q ss_pred -C-C-----CccchhhhcccccCcEEEEEecCCccccccceeeeeeeeeeecCCCccceeeeeeccCCCcceeeeChhhh
Q 014606 184 -G-K-----VKYMQLANCLFRMGGAGILLSNKKEDRQRAKYELQHLVRTHLGSKDTAYKCVFQEHDDEGFTGVSLSRSIL 256 (421)
Q Consensus 184 -~-~-----d~~~~~~~~lfGDGAaA~lL~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~g~~~~~l~~~~p 256 (421)
+ . +| ..++.|+||+++||++.+.... .+.++...+..+ .++. .+ .. +
T Consensus 226 ~p~~d~~~~~r----~G~v~GEGAa~lvLE~~~~A~~-Rga~i~AeI~G~-~~d~------------~~-----~~---~ 279 (398)
T PRK06519 226 APVWSRGGEDG----GGFILGSGGAFLVLESREHAEA-RGARPYARISGV-ESDR------------AR-----RA---P 279 (398)
T ss_pred CchhccCccCC----CCeeeeceEEEEEEeeHHHHHh-CCCceEEEEEEE-eecC------------CC-----CC---h
Confidence 0 1 23 4778999999999998654321 011111111011 0110 00 00 0
Q ss_pred HHHHHHHHHHHHHhhhhccchhHHHHHHHHhhhhhcCCCCCCCCCCCCCccccccEEEecCCCHH-----HHHHHHHHCC
Q 014606 257 QVAGEALKANMATLAAMVLPYSELVWYAVSVTWKKIWPPGRKRGPYIPDFRKAFEHFCVHAGGKA-----VIDAIKENLK 331 (421)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~gl~~~~~~~~~~~did~~i~Hq~~~~-----~~~~i~~~lg 331 (421)
.. ..+.|.++|.++|+ + +|||++..|-.+-+ =.+.+.+.++
T Consensus 280 ----~~---------------------~~~am~~AL~~Agl-~--------~~IdyI~ahgtgT~~~D~~E~~Ai~~~f~ 325 (398)
T PRK06519 280 ----GD---------------------LEASLERLLKPAGG-L--------AAPTAVISGATGAHPATAEEKAALEAALA 325 (398)
T ss_pred ----HH---------------------HHHHHHHHHHHCCC-c--------ccCCEEEeCCCCCCCccHHHHHHHHHHcC
Confidence 00 11345567788898 5 89999999976543 3555677777
Q ss_pred CChhhhHHHHHHHhccCCCccchHHHHHHH---HHHcCCCCCC-------------CeEEEEeecccccccceeee
Q 014606 332 LKDRDVEASKTTLYRFGNTSSSSVWYELSY---LEAKGKVKKG-------------DKIWQLAFGSGFKCNSAVWK 391 (421)
Q Consensus 332 l~~~~~~~s~~~l~~~Gn~~sasi~i~L~~---~~~~g~~~~G-------------d~vll~~~G~G~~~~~~llr 391 (421)
+|.. .+=..+||+.+|+-.+.+.. ++++|.+.|. ...+.+++|-|-.-+..+++
T Consensus 326 ~pvs------S~Ks~~GH~l~AAGa~e~i~~~lal~~g~vpp~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (398)
T PRK06519 326 GPVR------GIGTLFGHTMEAQFPLGLALAALSVSKGALFPPFDASGEKPMSGAAREAVVTTVGHWRGEGMALVE 395 (398)
T ss_pred CCcc------ccchhhccchHHHHHHHHHHHHHHHhcCccCCCCCCCcccCccccccEEEEEeeccCCcceeEEEE
Confidence 6522 34456899999987776654 4556654221 12456667665444544443
No 109
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=99.13 E-value=2.1e-10 Score=117.24 Aligned_cols=94 Identities=18% Similarity=0.357 Sum_probs=83.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEec-cCCCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHHc
Q 014606 85 LKTVLFSIVQDLFSKHKINPKSIDILITNC-SVSCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLRV 163 (421)
Q Consensus 85 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s-s~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~~ 163 (421)
..+|+.+|+++||+++|+++++||.||+++ ++....+..+..++..+|++.++++++++ .+|++++.++..|.++|++
T Consensus 27 ~~~L~~~A~~~Al~dAgl~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~p~~~v~-~~CaSg~~al~~A~~~I~s 105 (426)
T PRK08170 27 ASDLAVAAGRALLNRQPFAPDDLDEVILGCAMPSPDEANIARVVALRLGCGEKVPAWTVQ-RNCASGMQALDSAAANIAL 105 (426)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcChHHHHHHHHhCcCCCceeeecc-chhhHHHHHHHHHHHHHHC
Confidence 358999999999999999999999999875 33323457788899999997568999999 5999999999999999999
Q ss_pred cCCCeEEEEEeccccC
Q 014606 164 QKNSLALVLSMESVSS 179 (421)
Q Consensus 164 g~~~~vLvv~~e~~s~ 179 (421)
|..++||++++|.+|.
T Consensus 106 G~~d~vLv~G~E~ms~ 121 (426)
T PRK08170 106 GRADLVLAGGVEAMSH 121 (426)
T ss_pred CCCCEEEEEEEecccC
Confidence 9999999999998775
No 110
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=99.12 E-value=2.7e-09 Score=105.76 Aligned_cols=247 Identities=15% Similarity=0.066 Sum_probs=151.8
Q ss_pred HHHHHHHHHHHHHhCCC--CCCCccEEEEeccCC-----------------CC--------CC-cHHHHHHHHcCCCCCc
Q 014606 86 KTVLFSIVQDLFSKHKI--NPKSIDILITNCSVS-----------------CP--------TP-SVAAMVINKFGLKSNV 137 (421)
Q Consensus 86 ~~la~~Aa~~aL~~ag~--~~~~Id~li~~ss~~-----------------~~--------~p-~~a~~l~~~LGl~~~~ 137 (421)
..++..|++++++++|+ +++++..++-++... .. .+ ..+.+|...+|++ .
T Consensus 5 ~~~~~~a~~~a~~~a~~~~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~~l~--G 82 (342)
T PRK14691 5 WRYKWITFHPSLTHADNTEKQERTATIIGAGIGGFPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHVSIKHHFK--G 82 (342)
T ss_pred HHHHHHHHHHHHHhCCCCCCcccEEEEEecCcccHHHHHHHHHHHHhcCccccChhHHhhhhhhHHHHHHHHHhCCC--C
Confidence 46899999999999996 566776555433211 00 11 3578899999997 5
Q ss_pred eeeeeeCCcchHHHHHHHHHHHHHHccCCCeEEEEEeccccCC-----------C----c--------c-CCCccchhhh
Q 014606 138 RSFHLSGMGCSAGILSISLAKDLLRVQKNSLALVLSMESVSSN-----------G----Y--------Q-GKVKYMQLAN 193 (421)
Q Consensus 138 ~~~~i~~~~C~g~~~al~~A~~li~~g~~~~vLvv~~e~~s~~-----------~----~--------~-~~d~~~~~~~ 193 (421)
+.+.+. .+|++++.||..|..+|+.|..+.+||.++|..... + . + ..+| ..
T Consensus 83 p~~ti~-~aCaSg~~Al~~A~~~I~~G~~d~~ivgg~d~~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r----~G 157 (342)
T PRK14691 83 PIGAPV-TACAAGVQAIGDAVRMIRNNEADVALCGGAEAVIDTVSLAGFAAARALSTHFNSTPEKASRPFDTAR----DG 157 (342)
T ss_pred Cccccc-cHhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHhhhhhcCCCCCCCcCCCCCCCCC----CC
Confidence 889999 599999999999999999999999999999873221 0 0 0 0122 36
Q ss_pred cccccCcEEEEEecCCcccc---ccceeeeeeeeeeecCCCccceeeeeeccCCCcceeeeChhhhHHHHHHHHHHHHHh
Q 014606 194 CLFRMGGAGILLSNKKEDRQ---RAKYELQHLVRTHLGSKDTAYKCVFQEHDDEGFTGVSLSRSILQVAGEALKANMATL 270 (421)
Q Consensus 194 ~lfGDGAaA~lL~~~~~~~~---~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~~~ 270 (421)
+++||||+++||++.+.... ....+|.+ ....+++.... .+ . |. .
T Consensus 158 ~v~gEGAa~lvLes~~~A~~rG~~i~a~I~g---~~~~~d~~~~~---~p-----------~---p~--~---------- 205 (342)
T PRK14691 158 FVMGEGAGLLIIEELEHALARGAKPLAEIVG---YGTSADAYHMT---SG-----------A---ED--G---------- 205 (342)
T ss_pred ccccceEEEEEEeeHHHHHhCCCCceEEEEE---EEEEcCCCCCC---CC-----------C---CC--H----------
Confidence 78999999999997553211 01122221 11112211000 00 0 00 0
Q ss_pred hhhccchhHHHHHHHHhhhhhcCCCCCCCCCCCCCccccccEEEecCCCHHH-----HHHHHHHCCCChhhhHHHHHHHh
Q 014606 271 AAMVLPYSELVWYAVSVTWKKIWPPGRKRGPYIPDFRKAFEHFCVHAGGKAV-----IDAIKENLKLKDRDVEASKTTLY 345 (421)
Q Consensus 271 ~~~~~~~~~~~~~~~~~i~~~l~~~gl~~~~~~~~~~~did~~i~Hq~~~~~-----~~~i~~~lgl~~~~~~~s~~~l~ 345 (421)
....+.|.++|+++|++ ++|||++-.|-.+-.. .+.+.+.||-. ..+.- -.+=.
T Consensus 206 -----------~~~~~ai~~AL~~Agl~--------p~dIdyIeaHgtgT~~~D~~E~~Ai~~~fg~~-~~~~v-~s~K~ 264 (342)
T PRK14691 206 -----------DGAYRAMKIALRQAGIT--------PEQVQHLNAHATSTPVGDLGEINAIKHLFGES-NALAI-TSTKS 264 (342)
T ss_pred -----------HHHHHHHHHHHHHcCCC--------HHHCCEEEecCCCCcCCCHHHHHHHHHHhCCC-CCceE-ECCcc
Confidence 01123455677788998 4999999999866544 34456666632 11210 12335
Q ss_pred ccCCCccchHHHHHHH---HHHcCCCC-------------------------CCCeEEEEeecccccccceeeee
Q 014606 346 RFGNTSSSSVWYELSY---LEAKGKVK-------------------------KGDKIWQLAFGSGFKCNSAVWKC 392 (421)
Q Consensus 346 ~~Gn~~sasi~i~L~~---~~~~g~~~-------------------------~Gd~vll~~~G~G~~~~~~llr~ 392 (421)
.+||+.+|+-.+.+.. +++++.+. +-..+|.-+||-|..-++++|+.
T Consensus 265 ~~GH~~~AaG~~~~~~~~l~l~~~~ippt~n~~~~d~~~~~~~~v~~~~~~~~~~~al~nsfgfGG~n~~lvl~~ 339 (342)
T PRK14691 265 ATGHLLGAAGGLETIFTVLALRDQIVPATLNLENPDPAAKGLNIIAGNAQPHDMTYALSNGFGFAGVNASILLKR 339 (342)
T ss_pred cccCCcchhhHHHHHHHHHHHhCCccCCcCCCCCCCccccccCcccCCCccCCCCEEEEeCccCCCeeEEEEEee
Confidence 6899876664433332 23333221 12456788899888888888864
No 111
>PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B ....
Probab=99.11 E-value=4e-10 Score=107.90 Aligned_cols=95 Identities=19% Similarity=0.266 Sum_probs=83.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEec-cCCCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHHc
Q 014606 85 LKTVLFSIVQDLFSKHKINPKSIDILITNC-SVSCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLRV 163 (421)
Q Consensus 85 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s-s~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~~ 163 (421)
+.+|+.+|++.+|+++++++++||.|++++ .+....+..+..++-..|++..++++.|+ ..|++++.|+..|...|++
T Consensus 26 ~~~L~~~a~~~al~~~~i~~~~Id~v~~G~~~~~~~g~~~ar~~~l~aGl~~~vp~~~V~-~~CaSG~~Av~~a~~~I~s 104 (264)
T PF00108_consen 26 PEDLAAEAVKAALERAGIDPEDIDAVIVGNVLQEGEGQNIARQAALAAGLPESVPATTVN-RACASGLQAVHLAAMAIAS 104 (264)
T ss_dssp HHHHHHHHHHHHHHHHTSHGGGEEEEEEE-SSSCTTTCHHHHHHHHHTTS-TTSEEEEEE--GGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhcccchhhhhhcCcccccccccchhhhhhhhhhcccccccceeeeh-hhhhHHHHHHHHhhhhhcC
Confidence 468999999999999999999999999987 55444677888889999998889999999 5999999999999999999
Q ss_pred cCCCeEEEEEeccccCC
Q 014606 164 QKNSLALVLSMESVSSN 180 (421)
Q Consensus 164 g~~~~vLvv~~e~~s~~ 180 (421)
|..+.+|++++|.+|..
T Consensus 105 G~~dvvlagGvE~mS~~ 121 (264)
T PF00108_consen 105 GEADVVLAGGVESMSRV 121 (264)
T ss_dssp TS-SEEEEEEEEETTTS
T ss_pred CCccEEEEecccccccc
Confidence 99999999999999875
No 112
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=99.10 E-value=3.5e-09 Score=109.97 Aligned_cols=91 Identities=12% Similarity=0.119 Sum_probs=74.9
Q ss_pred HHHHHHHHHHHHHHhCCCC--CCCccEEEEeccCCCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHH
Q 014606 85 LKTVLFSIVQDLFSKHKIN--PKSIDILITNCSVSCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLR 162 (421)
Q Consensus 85 ~~~la~~Aa~~aL~~ag~~--~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~ 162 (421)
..+|+.+|+++||+++|++ +++||.+++++............++++||+.+ .+..... .||.++..++..|...|+
T Consensus 27 ~~~L~~eA~~~Al~DAGl~~~~~dID~v~v~~~~~~~~~~~~~~la~~lGl~p-~~~~~~~-~GG~s~~~~v~~Aa~~Ia 104 (498)
T PRK08257 27 PVDLMAAAARAAAADAGADAVLEAIDSVAVVNQLSWRYRDPPGLLAERLGADP-ARTVYSP-VGGNSPQRLVNEAALRIA 104 (498)
T ss_pred HHHHHHHHHHHHHHhcCCCcCHHHCCEEEEeccccccccCHHHHHHHHcCCCC-cceeEec-CCCHHHHHHHHHHHHHHH
Confidence 3589999999999999999 99999998764211122334588999999974 5555566 589899999999999999
Q ss_pred ccCCCeEEEEEeccc
Q 014606 163 VQKNSLALVLSMESV 177 (421)
Q Consensus 163 ~g~~~~vLvv~~e~~ 177 (421)
+|..+.|||+++|.+
T Consensus 105 sG~advVLv~G~E~~ 119 (498)
T PRK08257 105 AGEADVALVAGAEAQ 119 (498)
T ss_pred CCCCCEEEEeeeeec
Confidence 999999999999974
No 113
>PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=99.07 E-value=2.2e-08 Score=101.64 Aligned_cols=311 Identities=13% Similarity=0.140 Sum_probs=176.0
Q ss_pred CceEEEEeeeecCCCCCccCHHHHHHHHHHcC-CCChHHHHHHHHHHHHcCCCCceecCCCCCCCC-CCCChHHHHHHHH
Q 014606 9 KRVYLVDFICYKAPESLRAPISAFIEHTERSG-TFDSKAVEFQTKVLERSGVGNETCLPCGTHLLP-ADGSLNSSMEELK 86 (421)
Q Consensus 9 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~-~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~-~~~s~~~~~~~~~ 86 (421)
+.|.|.|+|...|-- .+.+++.+.+-.-. .+.+ ... +...+...+.....+..... .............
T Consensus 2 ~rVvITG~G~vsp~G---~~~~~~w~~l~~G~sgi~~-----~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~r~~ 72 (406)
T PRK07967 2 RRVVITGLGIVSSIG---NNQQEVLASLREGRSGITF-----SPE-FAEMGMRSQVWGNVKLDPTGLIDRKVMRFMGDAS 72 (406)
T ss_pred CcEEEEcceEECCCC---CCHHHHHHHHHcCCCceeE-----CCc-ccccCCCCceEEEcCCChhhcCCHHHhhcCCHHH
Confidence 689999999999986 88999998774210 0110 000 11123333322111100000 0000000111245
Q ss_pred HHHHHHHHHHHHhCCCCCCC-----ccEEEEeccCC------------------C--------CCC-cHHHHHHHHcCCC
Q 014606 87 TVLFSIVQDLFSKHKINPKS-----IDILITNCSVS------------------C--------PTP-SVAAMVINKFGLK 134 (421)
Q Consensus 87 ~la~~Aa~~aL~~ag~~~~~-----Id~li~~ss~~------------------~--------~~p-~~a~~l~~~LGl~ 134 (421)
.++..|+++||+++|+++++ +..++-++... . ..+ ..+.+|+..+|++
T Consensus 73 ~~a~~aa~~Al~dAGl~~~~~~~~rvGv~~gs~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~~l~ 152 (406)
T PRK07967 73 AYAYLAMEQAIADAGLSEEQVSNPRTGLIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSACLATPFKIK 152 (406)
T ss_pred HHHHHHHHHHHHHcCCCCccCCCCCEEEEEecCCccHHHHHHHHHHHHhccCcccCCchhhcccccchHHHHHHHHHCCC
Confidence 78999999999999987543 43333222111 0 011 2578899999997
Q ss_pred CCceeeeeeCCcchHHHHHHHHHHHHHHccCCCeEEEEEeccccCC----Cc-----------------cC--CCccchh
Q 014606 135 SNVRSFHLSGMGCSAGILSISLAKDLLRVQKNSLALVLSMESVSSN----GY-----------------QG--KVKYMQL 191 (421)
Q Consensus 135 ~~~~~~~i~~~~C~g~~~al~~A~~li~~g~~~~vLvv~~e~~s~~----~~-----------------~~--~d~~~~~ 191 (421)
.+.+.++ .+|++++.||..|..+|++|..+.+||.++|..+.. +. .+ .+|
T Consensus 153 --Gp~~tvs-~aCas~~~Ai~~A~~~ir~G~~d~~lvgg~d~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r---- 225 (406)
T PRK07967 153 --GVNYSIS-SACATSAHCIGNAVEQIQLGKQDIVFAGGGEELDWEMSCLFDAMGALSTKYNDTPEKASRAYDANR---- 225 (406)
T ss_pred --CCccccc-cHhHHHHHHHHHHHHHHHcCCCCEEEEeeecccChHHHHHHHHhhhhccCCCCCCCcCCcCCcCCC----
Confidence 5888899 599999999999999999999999999999864321 00 00 122
Q ss_pred hhcccccCcEEEEEecCCccccccceeeee-eeeeeecCCCccceeeeeeccCCCcceeeeChhhhHHHHHHHHHHHHHh
Q 014606 192 ANCLFRMGGAGILLSNKKEDRQRAKYELQH-LVRTHLGSKDTAYKCVFQEHDDEGFTGVSLSRSILQVAGEALKANMATL 270 (421)
Q Consensus 192 ~~~lfGDGAaA~lL~~~~~~~~~~~~~~~~-~~~~~~~t~~~~~~~~~~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~~~ 270 (421)
..++.|+||+++||++.+.... .+.++.. +...-..+|+.. +. .|. +..
T Consensus 226 ~G~v~gEGaa~lvLe~~~~A~~-rga~i~a~i~G~g~~~d~~~---~~----------------~p~--~~~-------- 275 (406)
T PRK07967 226 DGFVIAGGGGVVVVEELEHALA-RGAKIYAEIVGYGATSDGYD---MV----------------APS--GEG-------- 275 (406)
T ss_pred CceeeeceEEEEEEeeHHHHHh-CCCcEEEEEEEEEECCCCCC---CC----------------CCC--HHH--------
Confidence 3678999999999997543211 1122211 111212222210 00 011 010
Q ss_pred hhhccchhHHHHHHHHhhhhhcCCCCCCCCCCCCCccccccEEEecCCCHHH-----HHHHHHHCCCChhhhHHHHHHHh
Q 014606 271 AAMVLPYSELVWYAVSVTWKKIWPPGRKRGPYIPDFRKAFEHFCVHAGGKAV-----IDAIKENLKLKDRDVEASKTTLY 345 (421)
Q Consensus 271 ~~~~~~~~~~~~~~~~~i~~~l~~~gl~~~~~~~~~~~did~~i~Hq~~~~~-----~~~i~~~lgl~~~~~~~s~~~l~ 345 (421)
..+.|.++|.. .+ .|||++..|-.+-.. .+.+.+.||-..-.+ -.+=.
T Consensus 276 -------------~~~a~~~Al~~--~~---------~~Idyi~aHgtGT~~~D~~E~~Ai~~~fg~~~~~v---~s~K~ 328 (406)
T PRK07967 276 -------------AVRCMQMALAT--VD---------TPIDYINTHGTSTPVGDVKELGAIREVFGDKSPAI---SATKS 328 (406)
T ss_pred -------------HHHHHHHHHhC--CC---------CCccEEEcCCCCCCCCCHHHHHHHHHHhCCCCCee---ECccc
Confidence 01223344443 22 389999999865533 344566666321112 12335
Q ss_pred ccCCCccchHHHHHHH---HHHcCCCCC-------------------------CCeEEEEeecccccccceeeee
Q 014606 346 RFGNTSSSSVWYELSY---LEAKGKVKK-------------------------GDKIWQLAFGSGFKCNSAVWKC 392 (421)
Q Consensus 346 ~~Gn~~sasi~i~L~~---~~~~g~~~~-------------------------Gd~vll~~~G~G~~~~~~llr~ 392 (421)
.+||+.+|+-.+.+.. +++++.+.| -+.++.-+||-|..-.+++|+.
T Consensus 329 ~~GH~~~AaG~~e~i~~~lal~~~~iPpt~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~sfgfGG~n~~lvl~~ 403 (406)
T PRK07967 329 LTGHSLGAAGVQEAIYSLLMMEHGFIAPSANIEELDPQAAGMPIVTETTDNAELTTVMSNSFGFGGTNATLVFRR 403 (406)
T ss_pred ccccCccccchHHHHHHHHHHhcCcCCCCCCCCCCCccccCCCccCCCCcCCCCCEEEEecccCCCeeEEEEEEe
Confidence 6899998887765532 344443211 2457788899888888888875
No 114
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=99.07 E-value=5.8e-10 Score=112.80 Aligned_cols=93 Identities=11% Similarity=0.134 Sum_probs=81.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEec-cCCCCCCcHHH-HHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHH
Q 014606 85 LKTVLFSIVQDLFSKHKINPKSIDILITNC-SVSCPTPSVAA-MVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLR 162 (421)
Q Consensus 85 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s-s~~~~~p~~a~-~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~ 162 (421)
+.+|+.+|++++|++++++|++||.||+++ .+++..+..+. .+++.+|+. ++++++|+ .+|++++.++..|..+|+
T Consensus 23 ~~el~~~a~~~Al~~agl~p~dID~vi~g~~~~~~~g~~~~~~~~~~~lg~~-~~p~~~V~-~~Casg~~al~~A~~~I~ 100 (393)
T cd00826 23 AHEAGAKAIAAALEPAGVAAGAVEEACLGQVLGAGEGQNCAQQAAMHAGGLQ-EAPAIGMN-NLCGSGLRALALAMQLIA 100 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEEccCCcccCcHHHHHHHHcCCCC-CCcEEEec-chhHHHHHHHHHHHHHHH
Confidence 468999999999999999999999999986 45543455555 377888887 78999999 599999999999999999
Q ss_pred ccCCCeEEEEEeccccC
Q 014606 163 VQKNSLALVLSMESVSS 179 (421)
Q Consensus 163 ~g~~~~vLvv~~e~~s~ 179 (421)
+|..+.+||+++|.+|.
T Consensus 101 sG~~~~vlv~g~e~~s~ 117 (393)
T cd00826 101 GGDANCILAGGFEKMET 117 (393)
T ss_pred CCCCCEEEEEeeecccc
Confidence 99999999999999764
No 115
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=99.07 E-value=2e-08 Score=101.39 Aligned_cols=87 Identities=14% Similarity=0.108 Sum_probs=72.8
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHHccC
Q 014606 86 KTVLFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLRVQK 165 (421)
Q Consensus 86 ~~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~~g~ 165 (421)
.+|+.+|+++||+++|++++|||.++..+... +.....++..||+. ..+...+. .+|+++..++..|...|++|.
T Consensus 26 ~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~~---~~~~~~~~~~lGl~-~~~~~~v~-~gg~s~~~a~~~A~~~I~sG~ 100 (388)
T PRK08142 26 AQLHAEVAKGALADAGLSLADVDGYFCAGDAP---GLGPASMVDYLGLK-LRHVDSTE-TGGSSYLAHVGHAAQAIAAGK 100 (388)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCC---CccHHHHHHhCCCC-Ceeecccc-CCcHHHHHHHHHHHHHHHcCC
Confidence 47999999999999999999999977532111 11124599999997 57888888 599999999999999999999
Q ss_pred CCeEEEEEeccc
Q 014606 166 NSLALVLSMESV 177 (421)
Q Consensus 166 ~~~vLvv~~e~~ 177 (421)
.++|||++.|+.
T Consensus 101 ~d~vLvvg~e~~ 112 (388)
T PRK08142 101 CSVALITLAGRP 112 (388)
T ss_pred CCEEEEEeeeec
Confidence 999999999974
No 116
>KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=99.05 E-value=1.3e-09 Score=102.95 Aligned_cols=95 Identities=15% Similarity=0.174 Sum_probs=84.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEec-cCCCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHHc
Q 014606 85 LKTVLFSIVQDLFSKHKINPKSIDILITNC-SVSCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLRV 163 (421)
Q Consensus 85 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s-s~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~~ 163 (421)
+.+|+.-|++.+|+++.++++|++-+|+.. .+-..--..+.+.+---||+.+++++.++ ..|++++.|+.+|.+-|+.
T Consensus 30 A~~Lgsvaikaalera~v~~~~v~eVi~GnVl~AnlGQapaRQaalgAGlp~sv~~tTvN-kvCaSgmKAv~laaQsI~~ 108 (396)
T KOG1390|consen 30 ATELGSVAIKAALERAVVPPSDVAEVIFGNVLSANLGQAPARQAALGAGLPYSVPATTVN-KVCASGMKAVILAAQSIQT 108 (396)
T ss_pred hhhHHHHHHHHHHHhcCCCHHHhhhhhhccccccccCcchHHHHHhhcCCCcceeeEeeh-hhhhhhHHHHHHHHHHHhc
Confidence 568999999999999999999999999975 44444445678888888999899999999 7999999999999999999
Q ss_pred cCCCeEEEEEeccccCC
Q 014606 164 QKNSLALVLSMESVSSN 180 (421)
Q Consensus 164 g~~~~vLvv~~e~~s~~ 180 (421)
|..+.|+..+.|.+|..
T Consensus 109 G~~divVaGGmEsMS~v 125 (396)
T KOG1390|consen 109 GHADIVVAGGMESMSNV 125 (396)
T ss_pred CCccEEEecccchhccC
Confidence 99999999999999863
No 117
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=98.99 E-value=4.8e-08 Score=98.28 Aligned_cols=88 Identities=13% Similarity=0.190 Sum_probs=67.4
Q ss_pred HHHHHHHHHHHHHhCC-CCC-CCccEEEEeccCCC-CCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHH
Q 014606 86 KTVLFSIVQDLFSKHK-INP-KSIDILITNCSVSC-PTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLR 162 (421)
Q Consensus 86 ~~la~~Aa~~aL~~ag-~~~-~~Id~li~~ss~~~-~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~ 162 (421)
.+|+.+|+++||+++| +++ +|||.+++++.... ........++..||+. ..+.+.+ |+++..++..|...|+
T Consensus 26 ~eL~~eA~~~Al~DAG~l~~~~dId~~~~~~~~~~~~~~~~~~~~~~~lg~~-~~~~~~v----~~sg~~a~~~A~~aV~ 100 (385)
T PRK06066 26 REMMFEAASRAYKDAGNINPRRDVDSFISCQEDFWEGIAIADEFAPDQIGGA-MRPTMTV----AGDGLQGLAHAVMHIN 100 (385)
T ss_pred HHHHHHHHHHHHHhcCCCCChhcCCEEEEecCcccCcccccchhHHHHcccC-CCCeEEE----eCcHHHHHHHHHHHHH
Confidence 4799999999999999 997 79999987542111 0111224577889985 2344443 7889999999999999
Q ss_pred ccCCCeEEEEEecccc
Q 014606 163 VQKNSLALVLSMESVS 178 (421)
Q Consensus 163 ~g~~~~vLvv~~e~~s 178 (421)
+|.+++|||++.|+.+
T Consensus 101 sG~~d~vLv~g~~~~~ 116 (385)
T PRK06066 101 SGLANVVVVEAHSKPS 116 (385)
T ss_pred cCCCCEEEEEEEeecc
Confidence 9999999999998653
No 118
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=98.88 E-value=8.7e-09 Score=104.35 Aligned_cols=95 Identities=19% Similarity=0.262 Sum_probs=83.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEecc-CCCC-CCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHH
Q 014606 85 LKTVLFSIVQDLFSKHKINPKSIDILITNCS-VSCP-TPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLR 162 (421)
Q Consensus 85 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~ss-~~~~-~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~ 162 (421)
+.+|+.+|++++|+++|+++++||.+++++. ++.. .+..+..++..+|++..++++.|+ .+|++++.|+..|.+.|+
T Consensus 26 ~~eL~~~a~~~al~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Glp~~~p~~tV~-~~CaSG~~Ai~~A~~~I~ 104 (401)
T PRK08131 26 PDDLAATVIRRLLEKSGFPGDDIEDVILGCTNQAGEDSRNVARNALLLAGLPVTVPGQTVN-RLCASGLAAVIDAARAIT 104 (401)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHhcCCCCCCceeeee-chhhhHHHHHHHHHHHHH
Confidence 4589999999999999999999999999863 3322 355677789999998679999999 599999999999999999
Q ss_pred ccCCCeEEEEEeccccCC
Q 014606 163 VQKNSLALVLSMESVSSN 180 (421)
Q Consensus 163 ~g~~~~vLvv~~e~~s~~ 180 (421)
+|..+.+|+++.|.+|..
T Consensus 105 sG~~dvvlagG~Esms~~ 122 (401)
T PRK08131 105 CGEGDLYLAGGVESMSRA 122 (401)
T ss_pred CCCCCEEEEEEecCCCCC
Confidence 999999999999998864
No 119
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=98.83 E-value=1.2e-08 Score=104.09 Aligned_cols=94 Identities=15% Similarity=0.250 Sum_probs=81.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEecc-CCCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHHc
Q 014606 85 LKTVLFSIVQDLFSKHKINPKSIDILITNCS-VSCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLRV 163 (421)
Q Consensus 85 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~ss-~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~~ 163 (421)
+.+|+.+|++++|+++++++++||.+|+++. .....+.++..+.-..|++..++++.|+ .+|++++.|+.+|..+|++
T Consensus 31 ~~~L~~~a~~~al~~agl~~~~Id~vi~G~~~~~~~~~~~ar~~~l~aGl~~~~p~~~V~-~~CaSG~~A~~~a~~~I~s 109 (430)
T TIGR02446 31 AVDLGKMVVSELLARSEIDPKLIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVT-RACATSFQSAVNVAESIMA 109 (430)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCcCccchHHHHHHHhCCCCCCCchhhhh-hhhhHHHHHHHHHHHHHHC
Confidence 4589999999999999999999999999763 2222244666666668998679999999 5999999999999999999
Q ss_pred cCCCeEEEEEeccccC
Q 014606 164 QKNSLALVLSMESVSS 179 (421)
Q Consensus 164 g~~~~vLvv~~e~~s~ 179 (421)
|..+.+|+++.|.+|.
T Consensus 110 G~~dvvla~G~E~mS~ 125 (430)
T TIGR02446 110 GAIDIGIAGGADSSSV 125 (430)
T ss_pred CCCCEEEEeeeEcccC
Confidence 9999999999999985
No 120
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=98.80 E-value=5.4e-07 Score=108.33 Aligned_cols=214 Identities=11% Similarity=0.079 Sum_probs=135.4
Q ss_pred HHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHHccCCCeEEEEEeccccC-C----------C------ccC-
Q 014606 123 VAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLRVQKNSLALVLSMESVSS-N----------G------YQG- 184 (421)
Q Consensus 123 ~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~~g~~~~vLvv~~e~~s~-~----------~------~~~- 184 (421)
.+++|+..||++ .+++.|. .+|+|++.||++|.+.|++|.++.+|+.+++.... . + +..
T Consensus 185 ~A~RIS~~f~L~--Gps~tVd-tACsSSL~Al~~A~~~L~~G~~D~alvGGv~~~~~p~~~~~fs~~~~lS~~g~crpFD 261 (2582)
T TIGR02813 185 ISGRIANRFDLG--GMNCVVD-AACAGSLAAIRMALSELLEGRSEMMITGGVCTDNSPFMYMSFSKTPAFTTNEDIQPFD 261 (2582)
T ss_pred HHHHHHHHhCCC--CCccccc-chhHHHHHHHHHHHHHHHcCCCCEEEEecceeeCCHHHHHHHHhccCcCCCCCccCCC
Confidence 478999999997 5899999 69999999999999999999999999999876322 1 0 000
Q ss_pred CCccchhhhcccccCcEEEEEecCCccccccceeeeee-eeeeecCCCccceeeeeeccCCCcceeeeChhhhHHHHHHH
Q 014606 185 KVKYMQLANCLFRMGGAGILLSNKKEDRQRAKYELQHL-VRTHLGSKDTAYKCVFQEHDDEGFTGVSLSRSILQVAGEAL 263 (421)
Q Consensus 185 ~d~~~~~~~~lfGDGAaA~lL~~~~~~~~~~~~~~~~~-~~~~~~t~~~~~~~~~~~~~~~g~~~~~l~~~~p~~~~~~~ 263 (421)
.++ ..++.|+|++++||.+-+.... .+-+|..+ ..+-..+||... .+. .|...+
T Consensus 262 ~~a----dG~v~GEGag~vvLkrL~dA~~-dGd~IyAvI~G~g~~~DG~~~-~it----------------aP~~~g--- 316 (2582)
T TIGR02813 262 IDS----KGMMIGEGIGMMALKRLEDAER-DGDRIYAVIKGVGASSDGKFK-SIY----------------APRPEG--- 316 (2582)
T ss_pred CCC----CcccccceEEEEEeCcHHHHHh-CCCcEEEEEEEEEEcCCCCCC-CCc----------------CCCHHH---
Confidence 122 4678999999999998543210 01122121 222223333110 010 111100
Q ss_pred HHHHHHhhhhccchhHHHHHHHHhhhhhcCCCCCCCCCCCCCccccccEEEecCCCHHH-----HHHHHHHCCCCh---h
Q 014606 264 KANMATLAAMVLPYSELVWYAVSVTWKKIWPPGRKRGPYIPDFRKAFEHFCVHAGGKAV-----IDAIKENLKLKD---R 335 (421)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~gl~~~~~~~~~~~did~~i~Hq~~~~~-----~~~i~~~lgl~~---~ 335 (421)
..+.|.+++.++|+++ +||+++-.|-.+-.. ++.+.+.|+-.. .
T Consensus 317 --------------------q~~~i~~Al~~Agi~p--------~~I~yIeaHGTGT~~gD~~E~~Al~~vf~~~~~~~~ 368 (2582)
T TIGR02813 317 --------------------QAKALKRAYDDAGFAP--------HTCGLIEAHGTGTAAGDVAEFGGLVSVFSQDNDQKQ 368 (2582)
T ss_pred --------------------HHHHHHHHHHHcCCCH--------HHCCEEEecCCCCCCCCHHHHHHHHHHhcccccCCC
Confidence 0123456777889984 999999999865433 455666676432 1
Q ss_pred hhHHHHHHHhccCCCccchHHHHHHHH---HHcCCCCC--------------------------------C--CeEEEEe
Q 014606 336 DVEASKTTLYRFGNTSSSSVWYELSYL---EAKGKVKK--------------------------------G--DKIWQLA 378 (421)
Q Consensus 336 ~~~~s~~~l~~~Gn~~sasi~i~L~~~---~~~g~~~~--------------------------------G--d~vll~~ 378 (421)
.+.- -.+=.++||+.+|+=...|... ++.|.+.+ + .++++-+
T Consensus 369 ~~~v-gSvKs~iGH~~~AAG~a~lik~~lal~~~~iPp~~~~~~pnp~~~~~~~~~~v~~~~~pw~~~~~~~~r~a~vns 447 (2582)
T TIGR02813 369 HIAL-GSVKSQIGHTKSTAGTAGMIKAVLALHHKVLPPTINVDQPNPKLDIENSPFYLNTETRPWMQREDGTPRRAGISS 447 (2582)
T ss_pred Ccee-eccccccccchHhHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccccceeecCCcccCcccCCCCccEEEEeC
Confidence 1210 1233568999999888777653 33332211 1 3567788
Q ss_pred ecccccccceeeeee
Q 014606 379 FGSGFKCNSAVWKCI 393 (421)
Q Consensus 379 ~G~G~~~~~~llr~~ 393 (421)
||-|.+-..++|+-.
T Consensus 448 fGfGGtN~hvvlee~ 462 (2582)
T TIGR02813 448 FGFGGTNFHMVLEEY 462 (2582)
T ss_pred ccCCCeeEEEEEeec
Confidence 999999999999864
No 121
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=98.79 E-value=2.9e-08 Score=101.57 Aligned_cols=94 Identities=16% Similarity=0.278 Sum_probs=77.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCC--ccEEEEecc-CCC--CCCcHHHHHHHHcCCC------CCceeeeeeCCcchHHHHH
Q 014606 85 LKTVLFSIVQDLFSKHKINPKS--IDILITNCS-VSC--PTPSVAAMVINKFGLK------SNVRSFHLSGMGCSAGILS 153 (421)
Q Consensus 85 ~~~la~~Aa~~aL~~ag~~~~~--Id~li~~ss-~~~--~~p~~a~~l~~~LGl~------~~~~~~~i~~~~C~g~~~a 153 (421)
..+|+.+|++++|+++|++++| ||.+|+++. ... ..+..+..+...+|++ ...+++.|+ .+|++++.|
T Consensus 48 ~~eL~~~a~~~al~~agl~~~d~~ID~vi~G~~~~~~~~~~~~~a~~~~~~~gl~~~~~gl~~~p~~~V~-~~caSG~~A 126 (438)
T PTZ00455 48 LEELLATAIQGTLENTGLDGKAALVDKVVVGNFLGELFSSQGHLGPAAVGSLGQSGASNALLYKPAMRVE-GACASGGLA 126 (438)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCcCEEEEEeccccccccccchHHHHHHhccCcccccccCCCceeEEE-CcCHHHHHH
Confidence 3589999999999999999999 999998752 211 2345566777565554 368999999 599999999
Q ss_pred HHHHHHHHHccCCCeEEEEEeccccC
Q 014606 154 ISLAKDLLRVQKNSLALVLSMESVSS 179 (421)
Q Consensus 154 l~~A~~li~~g~~~~vLvv~~e~~s~ 179 (421)
+..|..+|++|..+.||++++|.++.
T Consensus 127 i~~A~~~I~sG~~dvvlv~G~E~ms~ 152 (438)
T PTZ00455 127 VQSAWEALLAGTSDIALVVGVEVQTT 152 (438)
T ss_pred HHHHHHHHHCCCCCEEEEEEEeeccc
Confidence 99999999999999999999998765
No 122
>PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the N-terminal domain of beta-ketoacyl-ACP synthases. ; PDB: 1J3N_B 3KZU_C 1W0I_A 2IX4_A 1F91_B 2BYZ_D 2AQB_C 2BZ3_C 1H4F_C 2VB9_B ....
Probab=98.79 E-value=7.8e-08 Score=91.25 Aligned_cols=118 Identities=17% Similarity=0.318 Sum_probs=83.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCC------ccEEEEec-cCCC-------------------C----CC-cHHHHHHHHcCC
Q 014606 85 LKTVLFSIVQDLFSKHKINPKS------IDILITNC-SVSC-------------------P----TP-SVAAMVINKFGL 133 (421)
Q Consensus 85 ~~~la~~Aa~~aL~~ag~~~~~------Id~li~~s-s~~~-------------------~----~p-~~a~~l~~~LGl 133 (421)
...|+..|+.+||+++|+++++ +. |++++ ..++ . .+ ..+.+|+..+|+
T Consensus 87 ~~~~~l~aa~~Al~dAg~~~~~~~~~~r~g-v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl 165 (254)
T PF00109_consen 87 QSRLALAAAREALEDAGLDPDDLDGERRVG-VFVGSSSGDYEFYRALDEDGETPRDVSPWFVPNTLPNSAAGRIAILFGL 165 (254)
T ss_dssp HHHHHHHHHHHHHHHHTSTGGGHTGGGTEE-EEEEESSSHHHHHHHHHHHTTCGGGSHTTHHHHHSTTHHHHHHHHHHTB
T ss_pred hhhHHHHHhhhhccccccccccccccccee-eccccccccccccccccccccccccccccccCcccccccccchhhhcCC
Confidence 4679999999999999998853 33 34443 2210 0 22 257899999999
Q ss_pred CCCceeeeeeCCcchHHHHHHHHHHHHHHccCCCeEEEEEecc-ccCCC---------ccCC------Cccchhhhcccc
Q 014606 134 KSNVRSFHLSGMGCSAGILSISLAKDLLRVQKNSLALVLSMES-VSSNG---------YQGK------VKYMQLANCLFR 197 (421)
Q Consensus 134 ~~~~~~~~i~~~~C~g~~~al~~A~~li~~g~~~~vLvv~~e~-~s~~~---------~~~~------d~~~~~~~~lfG 197 (421)
+ .+++.++ .+|++++.||..|..+|++|..+.|||.++|. .+... .... |+.. ..+++|
T Consensus 166 ~--G~~~tv~-~acaSgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~~s~~~~~~pf~~~~--~G~v~g 240 (254)
T PF00109_consen 166 R--GPSYTVS-TACASGLAALEAAYRAIRSGEADVALVGGVDAPLSPFILAGFSALGALSADGPCRPFDPFA--DGFVLG 240 (254)
T ss_dssp ---SSEEEEE--GGGHHHHHHHHHHHHHHTTSSSEEEEEEEE--SSHHHHHHHHHTTBB-TTSGGGSTBTTB---SB-BB
T ss_pred C--Ccccccc-ccccccccccchhccccccccccccccccccccccccccccccccccccccccccccCCCC--CCEEEE
Confidence 7 5788899 59999999999999999999999999999994 34320 0001 1111 578999
Q ss_pred cCcEEEEEecC
Q 014606 198 MGGAGILLSNK 208 (421)
Q Consensus 198 DGAaA~lL~~~ 208 (421)
+||+++||++.
T Consensus 241 EGa~~~vLe~~ 251 (254)
T PF00109_consen 241 EGAGALVLERL 251 (254)
T ss_dssp -EEEEEEEEEH
T ss_pred CceEEEEEEEh
Confidence 99999999864
No 123
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.71 E-value=5.2e-07 Score=91.10 Aligned_cols=121 Identities=16% Similarity=0.231 Sum_probs=88.6
Q ss_pred HHHHHHHHHHHHHHHhCCCC-CCCcc--E-EEEec-cCC----------------------C----CCC-cHHHHHHHHc
Q 014606 84 ELKTVLFSIVQDLFSKHKIN-PKSID--I-LITNC-SVS----------------------C----PTP-SVAAMVINKF 131 (421)
Q Consensus 84 ~~~~la~~Aa~~aL~~ag~~-~~~Id--~-li~~s-s~~----------------------~----~~p-~~a~~l~~~L 131 (421)
....|++.|+++||+++|++ ...++ . +++.+ ..+ + .++ ..+..++..+
T Consensus 70 ~~~~~a~~Aa~eAl~dAgl~~~~~~~~r~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~vs~~~ 149 (412)
T COG0304 70 RFSQLAVVAAVEALEDAGLDNELNVDMRVGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNLAAGNVAIVF 149 (412)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccccCccEEEEEeccCCCcchhhhHHHHHHhcCCccCcCchhhhhhccchHHHHHHHHh
Confidence 35689999999999999997 33342 2 22222 111 0 122 2467899999
Q ss_pred CCCCCceeeeeeCCcchHHHHHHHHHHHHHHccCCCeEEEEEecc-ccCC----C--------c--------cC--CCcc
Q 014606 132 GLKSNVRSFHLSGMGCSAGILSISLAKDLLRVQKNSLALVLSMES-VSSN----G--------Y--------QG--KVKY 188 (421)
Q Consensus 132 Gl~~~~~~~~i~~~~C~g~~~al~~A~~li~~g~~~~vLvv~~e~-~s~~----~--------~--------~~--~d~~ 188 (421)
|++ -+.+.+. .+|+++.+||..|.++|+.|..+.+++.++|. .+.. | + ++ .+|+
T Consensus 150 g~~--G~~~~~~-tACatg~~AIg~A~~~I~~G~ad~~iaGG~e~~i~~~~i~gF~am~Alst~nd~p~~asrPfd~~Rd 226 (412)
T COG0304 150 GLK--GPNYTPV-TACATGAHAIGDAVRLIRLGKADVVIAGGAEAAITPLGIAGFEAMRALSTRNDDPEKASRPFDKNRD 226 (412)
T ss_pred CCC--CCcCChh-hhHHhHHHHHHHHHHHHHcCCCCEEEEcccccccCHHHHHHHHHHHHhccCCCCccccCCCCCCCCC
Confidence 997 5888999 59999999999999999999999999999976 2221 0 0 01 2343
Q ss_pred chhhhcccccCcEEEEEecCCcc
Q 014606 189 MQLANCLFRMGGAGILLSNKKED 211 (421)
Q Consensus 189 ~~~~~~lfGDGAaA~lL~~~~~~ 211 (421)
.+++|+||+++||+.-+..
T Consensus 227 ----Gfv~gEGag~lVLE~~ehA 245 (412)
T COG0304 227 ----GFVIGEGAGALVLEELEHA 245 (412)
T ss_pred ----CEEEecceeEEEecChhhH
Confidence 7899999999999987654
No 124
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=98.67 E-value=1e-07 Score=97.37 Aligned_cols=95 Identities=8% Similarity=0.181 Sum_probs=79.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEec-cCCCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHHc
Q 014606 85 LKTVLFSIVQDLFSKHKINPKSIDILITNC-SVSCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLRV 163 (421)
Q Consensus 85 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s-s~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~~ 163 (421)
+.+|+.+|++++|+++|+++++||.+++++ .+....+..+..+.-..|++...+++.|+ .+|++++.++..|..+|++
T Consensus 31 ~~eL~~~a~~~al~~agl~~~~Id~vv~G~~~~~~~~~~~~r~~~l~~gl~~~~p~~~V~-~~CaSG~~ai~~A~~~I~s 109 (427)
T PRK09268 31 NQDMLTAALDGLVDRFGLQGERLGEVVAGAVLKHSRDFNLTRECVLGSALSPYTPAYDLQ-QACGTGLEAAILVANKIAL 109 (427)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCccccHHHHHHHHcCCCCCCceeeee-chhhHHHHHHHHHHHHHHC
Confidence 358999999999999999999999999976 22111244566655666675568999999 5999999999999999999
Q ss_pred cCCCeEEEEEeccccCC
Q 014606 164 QKNSLALVLSMESVSSN 180 (421)
Q Consensus 164 g~~~~vLvv~~e~~s~~ 180 (421)
|..+.+|+++.|.+|..
T Consensus 110 G~~d~vlvgG~E~ms~~ 126 (427)
T PRK09268 110 GQIDSGIAGGVDTTSDA 126 (427)
T ss_pred CCCCEEEEeeEEccCCC
Confidence 99999999999998853
No 125
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A.
Probab=98.65 E-value=5.9e-07 Score=85.18 Aligned_cols=238 Identities=13% Similarity=0.116 Sum_probs=130.6
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHH
Q 014606 81 SMEELKTVLFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDL 160 (421)
Q Consensus 81 ~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~l 160 (421)
+++--..|..+|++.+|+++++.++|||.++-.---... ..++..++.|++ |.+.+.+ +|+....+|.+|..+
T Consensus 47 wEkAE~~m~~~A~~~al~Ka~l~~~dId~~~aGDLlnQ~--i~s~f~ar~l~i----Pf~Glyg-ACST~~e~l~laa~~ 119 (329)
T PF07451_consen 47 WEKAESKMQKEAVELALKKAGLKKEDIDYLFAGDLLNQI--ISSSFAARDLGI----PFLGLYG-ACSTMMESLALAAML 119 (329)
T ss_dssp HHHHHHHHHHHHHHHHHHHTT--GGG-SEEEEEETTCCC--CHHHHHHHHHT------EEEB---CCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCeEEEehhhhhhh--HHHHHHHHhcCC----Cccchhh-HHHHHHHHHHHHHHH
Confidence 444445799999999999999999999988765432333 345888999976 5899995 999999999999999
Q ss_pred HHccCCCeEEEEEeccccC---CCccC----CCccchhhhcccccCcEEEEEecCCccccccceeeeeeeeeeecCCCcc
Q 014606 161 LRVQKNSLALVLSMESVSS---NGYQG----KVKYMQLANCLFRMGGAGILLSNKKEDRQRAKYELQHLVRTHLGSKDTA 233 (421)
Q Consensus 161 i~~g~~~~vLvv~~e~~s~---~~~~~----~d~~~~~~~~lfGDGAaA~lL~~~~~~~~~~~~~~~~~~~~~~~t~~~~ 233 (421)
+.+|-+++||+.++-.... .|+.+ ..|. .+..+--=||+|+||++.... .+|.++ |-|+-
T Consensus 120 vdgg~a~~vla~tSSH~~tAERQfR~P~EyG~Qrp--~tAqwTVTGaGa~il~~~~~~-----p~It~~------T~GkV 186 (329)
T PF07451_consen 120 VDGGFADYVLAATSSHFATAERQFRFPTEYGGQRP--PTAQWTVTGAGAAILSKEGSG-----PRITHA------TIGKV 186 (329)
T ss_dssp HHTTS-SEEEEEEEE-CCHHHHHT---GGGT------TT--EE--EEEEEEEESS--S-----EEEEEE------E----
T ss_pred HhCCCcceEEEEeccccchhhhhccCchhccCCCC--CcccEEEeceEEEEEecCCCC-----cEEEEE------EEEEE
Confidence 9999999999988765432 12111 1121 134455678999999987654 232221 11211
Q ss_pred ceeeeeeccCCCcceeeeChhhhHHHHHHHHHHHHHhhhhccchhHHHHHHHHhhhhhcCCCCCCCCCCCCCccccccEE
Q 014606 234 YKCVFQEHDDEGFTGVSLSRSILQVAGEALKANMATLAAMVLPYSELVWYAVSVTWKKIWPPGRKRGPYIPDFRKAFEHF 313 (421)
Q Consensus 234 ~~~~~~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~gl~~~~~~~~~~~did~~ 313 (421)
.+ ++.. |.-+| +. ..--.++.+|.+.+++.|.+ ++|.|.+
T Consensus 187 vD-----------~G~~---D~~nM-Ga-----------------AMAPAA~dTI~~h~~D~g~~--------p~dYDlI 226 (329)
T PF07451_consen 187 VD-----------MGIK---DPNNM-GA-----------------AMAPAAADTIEQHFKDTGRS--------PDDYDLI 226 (329)
T ss_dssp B------------SS------TT-H-HH-----------------HHHHHHHHHHHHHHHHCT----------GGG-SEE
T ss_pred EE-----------cCCC---Ccccc-hh-----------------hHhHHHHHHHHHHHHHhCCC--------hhhcCeE
Confidence 11 0111 10001 10 11123455666777777888 4999999
Q ss_pred EecC---CCHHHHHHHHHHCCCChhhhHHHHHHH------h--c--cCCCccchHHHHHH----HHHHcCCCCCCCeEEE
Q 014606 314 CVHA---GGKAVIDAIKENLKLKDRDVEASKTTL------Y--R--FGNTSSSSVWYELS----YLEAKGKVKKGDKIWQ 376 (421)
Q Consensus 314 i~Hq---~~~~~~~~i~~~lgl~~~~~~~s~~~l------~--~--~Gn~~sasi~i~L~----~~~~~g~~~~Gd~vll 376 (421)
+.-- .++.++..+.++-|++.++.+ .+.- + + -|-.|++..-..+. ..+++|++ .+||+
T Consensus 227 vTGDLg~vG~~il~~Ll~~~G~~i~~~~--~DCG~~iyd~~~Qdv~aGGSGcgCSA~V~~g~ll~~l~~g~~---krvL~ 301 (329)
T PF07451_consen 227 VTGDLGKVGRKILRDLLKEKGYDISENY--NDCGLMIYDPEKQDVHAGGSGCGCSAVVLCGYLLPKLRKGEL---KRVLF 301 (329)
T ss_dssp EESS-HHHHHHHHHHHHHHTT---GGGE--EEHHHCSS-TT-S--TT-EESHHHHHHHHHHCHHHHHHTTS----SEEEE
T ss_pred EecchHHHHHHHHHHHHHHcCCCCcccc--ccCCeEeecCCccccccCCCCcchHHHHHHHHHHHHHHcCCc---eEEEE
Confidence 9865 467899999999898866521 0110 0 0 23334333333332 23445666 58999
Q ss_pred Eeecccc
Q 014606 377 LAFGSGF 383 (421)
Q Consensus 377 ~~~G~G~ 383 (421)
++-|+=+
T Consensus 302 vaTGALl 308 (329)
T PF07451_consen 302 VATGALL 308 (329)
T ss_dssp EEEEE--
T ss_pred EEchhhc
Confidence 9988744
No 126
>PRK07937 lipid-transfer protein; Provisional
Probab=98.63 E-value=2.7e-06 Score=84.76 Aligned_cols=88 Identities=16% Similarity=0.143 Sum_probs=64.6
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCC--cHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHHc
Q 014606 86 KTVLFSIVQDLFSKHKINPKSIDILITNCSVSCPTP--SVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLRV 163 (421)
Q Consensus 86 ~~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p--~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~~ 163 (421)
.+|+.+|+++||+++|++++|||.++.+++ +.... .....+...+|+.+..+...+. +++..++..|...|++
T Consensus 25 ~el~~eA~~~Al~DAgl~~~dID~~~~~~~-~~~~~~~~~~~~~~~~~G~~~~~~~~~v~----~~g~~a~~~A~~aI~s 99 (352)
T PRK07937 25 VEMLMPCFAELYAELGITKSDIGFWCSGSS-DYLAGRAFSFISAIDSIGAVPPINESHVE----MDAAWALYEAWVKLLT 99 (352)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEcc-ccccccccchhhHHhhccCCCCCceEEec----CcHHHHHHHHHHHHhc
Confidence 379999999999999999999998854433 22111 1123455678875333344444 4577799999999999
Q ss_pred cCCCeEEEEEecccc
Q 014606 164 QKNSLALVLSMESVS 178 (421)
Q Consensus 164 g~~~~vLvv~~e~~s 178 (421)
|..++|||++.|+.+
T Consensus 100 G~~d~VLv~g~~k~~ 114 (352)
T PRK07937 100 GEVDTALVYGFGKSS 114 (352)
T ss_pred CCCCEEEEEEecccC
Confidence 999999999999754
No 127
>KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism]
Probab=98.47 E-value=1.3e-06 Score=82.60 Aligned_cols=92 Identities=17% Similarity=0.294 Sum_probs=75.8
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEec--cCCCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHHcc
Q 014606 87 TVLFSIVQDLFSKHKINPKSIDILITNC--SVSCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLRVQ 164 (421)
Q Consensus 87 ~la~~Aa~~aL~~ag~~~~~Id~li~~s--s~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~~g 164 (421)
+|...+.+..+++.+++|+.|.-|++.+ .+... -..+.+-+-.-|++..++...++ ..|+++++++.....-|++|
T Consensus 63 eLl~~vl~a~ie~t~~dp~~igdi~vG~vL~pg~g-a~e~R~a~~~ag~P~tvpv~tvN-RqCsSGLqaVadiA~~Ir~G 140 (435)
T KOG1389|consen 63 ELLAAVLRAVIEKTNLDPSLIGDIVVGTVLAPGSG-ASECRMAAFYAGFPETVPVRTVN-RQCSSGLQAVADIAAKIRAG 140 (435)
T ss_pred HHHHHHHHHHHhhcCCCHHHhcceeeeeccCCCcc-hHHHHHHHHHcCCCcccchhhhh-hhhhhHHHHHHHHHHHHhcC
Confidence 6899999999999999999999999976 33322 23334444566898778888888 79999999999999999999
Q ss_pred CCCeEEEEEeccccCC
Q 014606 165 KNSLALVLSMESVSSN 180 (421)
Q Consensus 165 ~~~~vLvv~~e~~s~~ 180 (421)
.++..|-.+.|.++..
T Consensus 141 ~ydIGla~GvESMt~~ 156 (435)
T KOG1389|consen 141 FYDIGLAAGVESMTTN 156 (435)
T ss_pred ceeeecccchhhhccc
Confidence 9999999999988754
No 128
>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.33 E-value=7.5e-05 Score=84.37 Aligned_cols=224 Identities=13% Similarity=0.121 Sum_probs=140.0
Q ss_pred HHHHHHHHHHHHhCCCCCCCcc----EEEEec-cCCCCCC-------------------cHHHHHHHHcCCCCCceeeee
Q 014606 87 TVLFSIVQDLFSKHKINPKSID----ILITNC-SVSCPTP-------------------SVAAMVINKFGLKSNVRSFHL 142 (421)
Q Consensus 87 ~la~~Aa~~aL~~ag~~~~~Id----~li~~s-s~~~~~p-------------------~~a~~l~~~LGl~~~~~~~~i 142 (421)
.|..+.+-+||+++|+.++.+. .|+.+. ..+|... ..+.+|+..|+++ .+.+.|
T Consensus 93 RllLe~aw~AlEdAG~~~~~l~g~~tgV~~g~~~~~y~~~~~~~~~~~~~~~~~g~~~~~~a~Risy~l~l~--GPs~~v 170 (1061)
T COG3321 93 RLLLEVAWEALEDAGIYPDSLRGSATGVFAGASVADYLLLLLADDEAEPEYAITGNSSSVAAGRISYVLGLS--GPSVTV 170 (1061)
T ss_pred hHHHHHHHHHHHHcCCCccccCCcceEEEEeeccCccccccccccccccceecccchhhHHHHHHHHHhcCC--CCCccc
Confidence 3999999999999999998887 344443 3343222 2578999999996 689999
Q ss_pred eCCcchHHHHHHHHHHHHHHccCCCeEEEEEeccccCC-----Cc-----cCCCc----cchhhhcccccCcEEEEEecC
Q 014606 143 SGMGCSAGILSISLAKDLLRVQKNSLALVLSMESVSSN-----GY-----QGKVK----YMQLANCLFRMGGAGILLSNK 208 (421)
Q Consensus 143 ~~~~C~g~~~al~~A~~li~~g~~~~vLvv~~e~~s~~-----~~-----~~~d~----~~~~~~~lfGDGAaA~lL~~~ 208 (421)
. .+|++.+.|+++|++.|++|.++.+|+-+....-.. +. ....+ +.-...++.|.|+++++|.+-
T Consensus 171 d-taCSSsLvAvhlA~~sL~~Ge~d~alaGgv~l~~~p~~~~~~~~~g~ls~~g~c~~fd~~adG~v~geG~g~vvLKrl 249 (1061)
T COG3321 171 D-TACSSSLVAVHLACQSLRLGECDLALAGGVNLVLSPESSYLFSAGGMLSPDGRCKAFDADADGYVRGEGAGVVVLKRL 249 (1061)
T ss_pred c-chhhHHHHHHHHHHHHHHcCCCCEEEecceEeccCCcceeeeecccCcCCCCcceecccCCCCEEEeeeEEEEEEEEh
Confidence 9 699999999999999999999999999888764221 00 00000 001146789999999999985
Q ss_pred Cccccccceeeee-eeeeeecCCCccceeeeeeccCCCcceeeeChhhhHHHHHHHHHHHHHhhhhccchhHHHHHHHHh
Q 014606 209 KEDRQRAKYELQH-LVRTHLGSKDTAYKCVFQEHDDEGFTGVSLSRSILQVAGEALKANMATLAAMVLPYSELVWYAVSV 287 (421)
Q Consensus 209 ~~~~~~~~~~~~~-~~~~~~~t~~~~~~~~~~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (421)
..... .+-+|.. +..+....||... .+. .|.... -...
T Consensus 250 ~~A~~-dgd~IyavI~gsavn~dG~~~-glt----------------aP~~~a-----------------------Q~~v 288 (1061)
T COG3321 250 SDAER-DGDRIYAVIRGSAVNQDGRSN-GLT----------------APNLEA-----------------------QADV 288 (1061)
T ss_pred HHHHh-CCCeEEEEEEeeeeccCCCcC-CCC----------------CCCHHH-----------------------HHHH
Confidence 43210 0112212 2223333333221 111 121110 0123
Q ss_pred hhhhcCCCCCCCCCCCCCccccccEEEecCCCHHH-----HHHHHHHCCCCh-hhhHHHHHHHhccCCCccchHHHHHHH
Q 014606 288 TWKKIWPPGRKRGPYIPDFRKAFEHFCVHAGGKAV-----IDAIKENLKLKD-RDVEASKTTLYRFGNTSSSSVWYELSY 361 (421)
Q Consensus 288 i~~~l~~~gl~~~~~~~~~~~did~~i~Hq~~~~~-----~~~i~~~lgl~~-~~~~~s~~~l~~~Gn~~sasi~i~L~~ 361 (421)
+.++|.++|+++ .+|+++=.|..+..+ +..+.+.++-.. +..+.--+.-.+.||+.+|.=...|-+
T Consensus 289 ~~~al~~a~i~p--------~tv~yvEaHgTGT~lGDpiE~~aL~~v~~~~~~~~~c~iGSvKsNiGH~~~AaGiagliK 360 (1061)
T COG3321 289 IREALADAGIDP--------ATVQYVEAHGTGTPLGDPIEANALGAVYGEGAPAQPCAIGSVKSNIGHLEAAAGIAGLIK 360 (1061)
T ss_pred HHHHHHhcCCCc--------ccCcEEEecCCCCCCcCHHHHHHHHHHhccCCCCCcccccccccccccHHHHHHHHHHHH
Confidence 446677889995 899999999965443 334445554322 222211234467899988887766665
Q ss_pred H
Q 014606 362 L 362 (421)
Q Consensus 362 ~ 362 (421)
.
T Consensus 361 ~ 361 (1061)
T COG3321 361 T 361 (1061)
T ss_pred H
Confidence 3
No 129
>PRK07855 lipid-transfer protein; Provisional
Probab=98.28 E-value=3.4e-06 Score=85.29 Aligned_cols=84 Identities=13% Similarity=0.141 Sum_probs=70.4
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHHccC
Q 014606 86 KTVLFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLRVQK 165 (421)
Q Consensus 86 ~~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~~g~ 165 (421)
.+|+.+|+++||+++|++++|||.+++.+. . ..+. ..+++.||+.+..+...+. .+|+++..++..|...|++|.
T Consensus 25 ~~L~~eA~~~Al~DAgl~~~dID~~~~~~~-~-~~~~--~~l~~~lGl~~~~~~~~v~-~gg~sg~~~~~~A~~~I~sG~ 99 (386)
T PRK07855 25 LRLACEAVLAALDDAGLAPSDVDGLVTFTM-D-TNPE--IAVARALGIGELKFFSRIH-YGGGAACATVQQAAMAVATGV 99 (386)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecC-c-cccH--HHHHHHCCCCCCcceeeec-CCcHHHHHHHHHHHHHHHCCC
Confidence 479999999999999999999999986442 1 1222 5688999997424556888 499999999999999999999
Q ss_pred CCeEEEEEe
Q 014606 166 NSLALVLSM 174 (421)
Q Consensus 166 ~~~vLvv~~ 174 (421)
++.|||++.
T Consensus 100 ~d~vLv~g~ 108 (386)
T PRK07855 100 ADVVVCYRA 108 (386)
T ss_pred CCEEEEEee
Confidence 999999987
No 130
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.22 E-value=4.6e-06 Score=80.42 Aligned_cols=121 Identities=15% Similarity=0.211 Sum_probs=89.4
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCC---Ccc----EEEEec-c---------------------CCCCCCc-----HHHHHH
Q 014606 83 EELKTVLFSIVQDLFSKHKINPK---SID----ILITNC-S---------------------VSCPTPS-----VAAMVI 128 (421)
Q Consensus 83 ~~~~~la~~Aa~~aL~~ag~~~~---~Id----~li~~s-s---------------------~~~~~p~-----~a~~l~ 128 (421)
.....+++.|+++||+++++.+. +.| .|.+.+ . .++..|- .+.+|+
T Consensus 92 s~~~~~al~aa~eAL~da~~~~~~~~e~dk~~~GV~iGtgmg~l~~i~e~a~~~~~~g~rrvsPffVPkil~NM~ag~vs 171 (440)
T KOG1394|consen 92 SKFTKLALTAAEEALKDAGLLDVNLSEEDKEKTGVLIGTGMGDLEDIYETAQNLSEKGYRRVSPFFVPKILTNMAAGYVS 171 (440)
T ss_pred hHHHHHHHHHHHHHHHhcCCCCcccchhhhhhhceEeccccccHHHHHHHHHHHHHhcccccCccccchhhcccccchhh
Confidence 34678999999999999998664 223 222222 1 1133442 368899
Q ss_pred HHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHHccCCCeEEEEEeccccCCC------------c---cC--------C
Q 014606 129 NKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLRVQKNSLALVLSMESVSSNG------------Y---QG--------K 185 (421)
Q Consensus 129 ~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~~g~~~~vLvv~~e~~s~~~------------~---~~--------~ 185 (421)
.++|+. .+...++ .+|+.+.+++--|..+|+.|..+..|.-++|.+-..+ + ++ .
T Consensus 172 m~~gl~--GpnhsvS-TACATg~h~igda~n~Ir~GdaDvmlAGgsE~~I~PlslaGF~r~RALSt~nd~P~~aSRPfD~ 248 (440)
T KOG1394|consen 172 MKYGLR--GPNHSVS-TACATGNHCIGDAFNFIRLGDADVMLAGGSEACINPLSLAGFSRARALSTRNDNPQKASRPFDK 248 (440)
T ss_pred hhhcCc--CCchhhH-hhhhhccchHHHHHHHHHhCccceeeccCcceeecchhhhhHHHHHHhhhcCCCccccCCCCcc
Confidence 999997 6888999 6999999999999999999999999999999864321 0 01 1
Q ss_pred CccchhhhcccccCcEEEEEecCCc
Q 014606 186 VKYMQLANCLFRMGGAGILLSNKKE 210 (421)
Q Consensus 186 d~~~~~~~~lfGDGAaA~lL~~~~~ 210 (421)
+| ..+++|+|++.+||+.=+.
T Consensus 249 ~R----dGFVmGEGagvlvlEelEH 269 (440)
T KOG1394|consen 249 KR----DGFVMGEGAGVLVLEELEH 269 (440)
T ss_pred CC----CceeeccceeEEehHhHHH
Confidence 23 3789999999999997554
No 131
>COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism]
Probab=98.01 E-value=2.5e-05 Score=79.05 Aligned_cols=95 Identities=15% Similarity=0.284 Sum_probs=77.8
Q ss_pred HHHHHHHHHHHHHhC--CCCCCCccEEEEec-cC-CCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHH
Q 014606 86 KTVLFSIVQDLFSKH--KINPKSIDILITNC-SV-SCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLL 161 (421)
Q Consensus 86 ~~la~~Aa~~aL~~a--g~~~~~Id~li~~s-s~-~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li 161 (421)
.++.....+..+++. ++++.+||.+|..+ .+ .......+..++..+|++.+.+.+.++ .+|++++.++..|...|
T Consensus 28 e~l~~a~~~a~~~~~~~~vd~~~v~~~~~G~~~~~g~~~~~~ar~~a~~aGl~~~~p~~~V~-~~c~SG~~Av~~A~~~I 106 (392)
T COG0183 28 EALGAALIDAGLERAPADVDAADVDDVILGCVLQAGEQGQNIARQAALAAGLPGSVPAVTVN-RACASGLAAVRLAAQAI 106 (392)
T ss_pred HHHHHHHHHHHhhhccccCCHHHhhhheeccccccccccccHHHHHHHHcCCCCCCCceEEe-ccchhHHHHHHHHHHHH
Confidence 345555555555433 67777899889875 33 335678889999999999669999999 59999999999999999
Q ss_pred HccCCCeEEEEEeccccCCC
Q 014606 162 RVQKNSLALVLSMESVSSNG 181 (421)
Q Consensus 162 ~~g~~~~vLvv~~e~~s~~~ 181 (421)
++|..+.||+++.|++|...
T Consensus 107 ~sG~~dvvlagG~E~mS~~~ 126 (392)
T COG0183 107 ASGEADVVLAGGVEKMSDAP 126 (392)
T ss_pred HCCCCCEEEEEeeeeccCCC
Confidence 99999999999999998753
No 132
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism]
Probab=97.99 E-value=7.4e-06 Score=75.95 Aligned_cols=89 Identities=12% Similarity=0.267 Sum_probs=74.4
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEec-cCCCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHHccC
Q 014606 87 TVLFSIVQDLFSKHKINPKSIDILITNC-SVSCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLRVQK 165 (421)
Q Consensus 87 ~la~~Aa~~aL~~ag~~~~~Id~li~~s-s~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~~g~ 165 (421)
+|+.+|..+||+++++.-++|+--++.- ..+. ....+...++|+. ..+.+.+++ .|+++.+||.+|+++|++|.
T Consensus 31 d~a~ea~tkal~da~ikys~vqqa~vgyvfgds---tcgqraiyevgmt-gipi~nvnn-ncatgssalflakqiiesgn 105 (408)
T KOG1406|consen 31 DFAKEAITKALQDAGIKYSEVQQAVVGYVFGDS---TCGQRAIYEVGMT-GIPIYNVNN-NCATGSSALFLAKQIIESGN 105 (408)
T ss_pred hHHHHHHHHHHHhcCCCHHHHHhhhheeeecCC---ccchHHHHhcccc-CcceeeccC-ccccCchHHHHHHHHHhcCC
Confidence 6999999999999999988888554432 1222 2335566689998 699999996 99999999999999999999
Q ss_pred CCeEEEEEeccccCC
Q 014606 166 NSLALVLSMESVSSN 180 (421)
Q Consensus 166 ~~~vLvv~~e~~s~~ 180 (421)
.++||..+.|++++.
T Consensus 106 ~dcvlalgfekm~~g 120 (408)
T KOG1406|consen 106 SDCVLALGFEKMERG 120 (408)
T ss_pred cceEEeechhhhCCc
Confidence 999999999998863
No 133
>KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=97.36 E-value=0.00031 Score=65.14 Aligned_cols=93 Identities=15% Similarity=0.189 Sum_probs=78.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEe----ccCCCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHH
Q 014606 85 LKTVLFSIVQDLFSKHKINPKSIDILITN----CSVSCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDL 160 (421)
Q Consensus 85 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~----ss~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~l 160 (421)
+.+|.+-|++.+|+.+++.++.+|+||+. ||.+-. .++..+--+.|.+.+.+++.|+ .=|.++.+++..+.+-
T Consensus 28 aTdL~~~AakAAL~aa~v~~e~VD~VI~GNV~aSSsDgI--Yl~RHvGL~~GvP~e~pALtiN-RLCGSGFQsiVNgaQ~ 104 (396)
T KOG1391|consen 28 ATDLGVVAAKAALKAANVGAEAVDHVIMGNVLASSSDGI--YLARHVGLRVGVPKETPALTIN-RLCGSGFQSIVNGAQE 104 (396)
T ss_pred hhhHHHHHHHHHHhhcCCChhhcceEEEeeeeeccCCce--EeeeccccccCCcCccCceeeh-hhhcccHHHHHhhHHH
Confidence 45899999999999999999999999984 333322 2345666677888889999999 6999999999999999
Q ss_pred HHccCCCeEEEEEeccccCC
Q 014606 161 LRVQKNSLALVLSMESVSSN 180 (421)
Q Consensus 161 i~~g~~~~vLvv~~e~~s~~ 180 (421)
|.-|..+.||.-+.|.+|..
T Consensus 105 I~vgea~ivL~GGtEnMSq~ 124 (396)
T KOG1391|consen 105 ICVGEAEIVLCGGTENMSQA 124 (396)
T ss_pred hhcCcceEEEecCccccccC
Confidence 99999999999999999863
No 134
>PF08540 HMG_CoA_synt_C: Hydroxymethylglutaryl-coenzyme A synthase C terminal; InterPro: IPR013746 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the C-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1TXT_D 1TVZ_A 1X9E_B 2HDB_B 3V4X_A 3V4N_C 2P8U_A 2FA0_A 2F9A_A 2F82_A ....
Probab=97.35 E-value=0.00048 Score=66.19 Aligned_cols=62 Identities=23% Similarity=0.268 Sum_probs=46.8
Q ss_pred hhHHHHHHHhccCCCccchHHHHHHHHH--HcCCCCCCCeEEEEeecccccccceeeeeeccCC
Q 014606 336 DVEASKTTLYRFGNTSSSSVWYELSYLE--AKGKVKKGDKIWQLAFGSGFKCNSAVWKCISNLR 397 (421)
Q Consensus 336 ~~~~s~~~l~~~Gn~~sasi~i~L~~~~--~~g~~~~Gd~vll~~~G~G~~~~~~llr~~~~~~ 397 (421)
|+.+|...-++.||+.+||+.+.|..++ .....-.|++|+++++|+|.....+.+++.+.-.
T Consensus 143 kv~psl~~~~~vGN~YTaSly~~L~SlL~~~~~~~l~GkrI~~FSYGSG~~s~~fs~~v~~~~~ 206 (282)
T PF08540_consen 143 KVEPSLLYSRQVGNMYTASLYLGLASLLSSAEADDLAGKRIGMFSYGSGLASEFFSGRVQPGAE 206 (282)
T ss_dssp HCHHHTHHHHHHB--GGGHHHHHHHHHHHHHHSCHHTT-EEEEEEEETTTEEEEEEEEE-TTGG
T ss_pred HHhHHHHHHHHcCceehHHHHHHHHHHhhccCccccCCCEEEEEEecCCcceeEEEEEEeCCcc
Confidence 4445555667899999999999999999 3344447999999999999999999999887554
No 135
>KOG1392 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=97.17 E-value=0.00034 Score=65.84 Aligned_cols=95 Identities=14% Similarity=0.221 Sum_probs=84.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEec-cCCCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHHc
Q 014606 85 LKTVLFSIVQDLFSKHKINPKSIDILITNC-SVSCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLRV 163 (421)
Q Consensus 85 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s-s~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~~ 163 (421)
+.+|+.+|...+|++..++.+.||+||+.| ..+.-....|...+-..|.+...++-.+. ++|.+.-.|+.+...||++
T Consensus 66 phdlar~al~~ll~kt~lpke~~dyii~gtviqevktsniareaal~agfsdktpahtvt-macissn~amttgmgliat 144 (465)
T KOG1392|consen 66 PHDLAREALKALLEKTKLPKEQLDYIICGTVIQEVKTSNIAREAALLAGFSDKTPAHTVT-MACISSNVAMTTGMGLIAT 144 (465)
T ss_pred hhHHHHHHHHHHHHhccCCHHHhceeeehhhHHHHhcchHHHHHHHhcCCCCCCccceee-eehhccchhhhccceeEee
Confidence 468999999999999999999999999987 44444556777777788999889999999 7999999999999999999
Q ss_pred cCCCeEEEEEeccccCC
Q 014606 164 QKNSLALVLSMESVSSN 180 (421)
Q Consensus 164 g~~~~vLvv~~e~~s~~ 180 (421)
|.++.++.-+.|.+|..
T Consensus 145 g~~dvivaggvelmsdv 161 (465)
T KOG1392|consen 145 GNADVIVAGGVELMSDV 161 (465)
T ss_pred CCcCEEEEcceeecccC
Confidence 99999999999999873
No 136
>PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain
Probab=96.19 E-value=0.083 Score=49.00 Aligned_cols=114 Identities=11% Similarity=-0.003 Sum_probs=78.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccCC----------------CCCC---------cHHHHHHHHcCCCCCcee
Q 014606 85 LKTVLFSIVQDLFSKHKINPKSIDILITNCSVS----------------CPTP---------SVAAMVINKFGLKSNVRS 139 (421)
Q Consensus 85 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~----------------~~~p---------~~a~~l~~~LGl~~~~~~ 139 (421)
...|++.++.+++++. +++|.+|++|..+ ...| ..++.+.-..|.. .+.
T Consensus 34 ~~rla~~~a~~~~~~~----~~~d~~VfaS~~Gel~~t~~ll~~l~~~~~lSPT~Fs~SVHNA~aG~~sI~~~~~--~~~ 107 (218)
T PF13723_consen 34 LSRLALEAALECLAED----EQPDAIVFASRHGELERTFKLLEALAEEEELSPTAFSQSVHNAAAGYWSIATKNT--GPN 107 (218)
T ss_pred HHHHHHHHHHHHHhcc----CCCCcEEEEeCCCcHHHHHHHHHHHHhCCCcCccchhhhhhhHHHHHHHHHhCCC--Cce
Confidence 4579999999998753 4678999987422 1222 1345555566654 688
Q ss_pred eeeeCCcchHHHHHHHHHHHHHHccCCCeEEEEEeccccCCCccCCCccchhhhcccccCcEEEEEecCCc
Q 014606 140 FHLSGMGCSAGILSISLAKDLLRVQKNSLALVLSMESVSSNGYQGKVKYMQLANCLFRMGGAGILLSNKKE 210 (421)
Q Consensus 140 ~~i~~~~C~g~~~al~~A~~li~~g~~~~vLvv~~e~~s~~~~~~~d~~~~~~~~lfGDGAaA~lL~~~~~ 210 (421)
..+. .+=.++..||.-|..++..| .+.||||+.|......+...... .....--|.|++|++.+.
T Consensus 108 tal~-a~~~sf~~aLleA~~~l~~~-~~~VLlv~~De~~p~~y~~~~~~----~~~~~~~A~al~L~~~~~ 172 (218)
T PF13723_consen 108 TALA-AGEDSFEAALLEAAAQLAEG-AEPVLLVCYDEPLPEPYQEFRPE----RDPPFPYALALVLSPGDS 172 (218)
T ss_pred EEEe-cCcchHHHHHHHHHHHHHcC-CCCEEEEEeCCCCChhhhhcccc----cCCCcCEEEEEEecCCCC
Confidence 8899 48899999999999999999 89999999999665432211000 112234578888887654
No 137
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2.3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....
Probab=96.08 E-value=0.009 Score=47.14 Aligned_cols=72 Identities=14% Similarity=0.292 Sum_probs=42.7
Q ss_pred HHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCCceeeeee---CCcchHHHHHHHHHHHHHHcc---CCCeEE
Q 014606 97 FSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSNVRSFHLS---GMGCSAGILSISLAKDLLRVQ---KNSLAL 170 (421)
Q Consensus 97 L~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~~~~~~i~---~~~C~g~~~al~~A~~li~~g---~~~~vL 170 (421)
|+++|++++|||.++... ........+.+++|++++....++. +.+|++...+| ..+++.+ +.+++|
T Consensus 1 L~~~g~~~~did~~i~hq----~~~~~~~~~~~~lgi~~~~~~~~~~~~Gn~~sa~~~~~L---~~~~~~g~~~~Gd~vl 73 (90)
T PF08541_consen 1 LERAGLSPDDIDHFIPHQ----ASKKILDSIAKRLGIPPERFPDNLAEYGNTGSASIPINL---ADALEEGRIKPGDRVL 73 (90)
T ss_dssp HHHTT--GGGESEEEE-S----SSHHHHHHHHHHHTS-GGGBE-THHHH-B-GGGHHHHHH---HHHHHTTSSCTTEEEE
T ss_pred CccccCCHHHCCEEEeCC----CCHHHHHHHHHHcCCcHHHHHHHHhccCcchhhhHHHHH---HHHHHcCCCCCCCEEE
Confidence 689999999999999865 2234556689999998554433332 23444444444 4445544 467888
Q ss_pred EEEec
Q 014606 171 VLSME 175 (421)
Q Consensus 171 vv~~e 175 (421)
+++.-
T Consensus 74 ~~~~G 78 (90)
T PF08541_consen 74 LVGFG 78 (90)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 88743
No 138
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....
Probab=95.14 E-value=0.021 Score=47.99 Aligned_cols=95 Identities=14% Similarity=0.069 Sum_probs=58.7
Q ss_pred hhhhcCCCCCCCCCCCCCccccccEEEecCCCHHHHHHHHHHCCCChhhhHHHHHHHhccCCCccchHHHHHHHHHHcCC
Q 014606 288 TWKKIWPPGRKRGPYIPDFRKAFEHFCVHAGGKAVIDAIKENLKLKDRDVEASKTTLYRFGNTSSSSVWYELSYLEAKGK 367 (421)
Q Consensus 288 i~~~l~~~gl~~~~~~~~~~~did~~i~Hq~~~~~~~~i~~~lgl~~~~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~g~ 367 (421)
+++.++++|++ .+|||.|=+|-.-....-...+.||++++++..+ --.=.+||...||=...+.+++.+-+
T Consensus 28 ~~~al~~ag~~--------~~did~~Ei~EaFA~~~l~~~~~lg~~~~~vN~~-GG~la~GHP~gasG~r~~~~l~~~L~ 98 (123)
T PF02803_consen 28 ARKALERAGLT--------PDDIDVIEINEAFAAQVLAFLEALGLDPEKVNPN-GGALALGHPLGASGARLVVELAHQLR 98 (123)
T ss_dssp HHHHHHHHT----------GGGESEEEE--SBHHHHHHHHHHHTTGGGGBSTT---HHHH-BHTTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCC--------ccccchhhccchhhhHHHHhhccccccccccCcc-cccccccccccccccchhhhhHHHHH
Confidence 44566677888 5999999999999988888999999999998532 12233899988876666665544222
Q ss_pred CCCCCeEEEEeecccccccceeee
Q 014606 368 VKKGDKIWQLAFGSGFKCNSAVWK 391 (421)
Q Consensus 368 ~~~Gd~vll~~~G~G~~~~~~llr 391 (421)
-+.|++.+...-+.|..-.+++++
T Consensus 99 ~~~~~~gla~~~~ggG~g~a~lle 122 (123)
T PF02803_consen 99 RRGGRYGLAAICAGGGQGSAVLLE 122 (123)
T ss_dssp HHTTSEEEEEEEETTTEEEEEEEE
T ss_pred HhchhhhhHHhcccceeeEEEEEE
Confidence 234666554333333334556655
No 139
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=94.54 E-value=0.15 Score=50.80 Aligned_cols=83 Identities=13% Similarity=0.178 Sum_probs=56.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCCceee-----eeeCCcchHHHHHHHHHHH
Q 014606 85 LKTVLFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSNVRSF-----HLSGMGCSAGILSISLAKD 159 (421)
Q Consensus 85 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~~~~~-----~i~~~~C~g~~~al~~A~~ 159 (421)
....+.++++++|+++|++++|||.+++.. .....-..+.++||++++.... ++.|.++++...+|..+..
T Consensus 206 ~~~~~~~~~~~~L~~~gl~~~did~~i~Hq----~~~~~~~~~~~~lgl~~ek~~~~~~~~~~GNt~sAsipl~L~~~~~ 281 (345)
T TIGR00748 206 YFHHVVTAAKGLMEKLGLTPEDFDYAVFHQ----PNGKFYLVAARMLGFPKEQVKPGLLTPRIGNTYSGATPVGLSAVLD 281 (345)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEeCC----CChHHHHHHHHHcCCCHHHeeccccccccCchhhhHHHHHHHHHHH
Confidence 345667899999999999999999998764 2233556689999998543222 4455667777777765544
Q ss_pred HHHccCCCeEEEEE
Q 014606 160 LLRVQKNSLALVLS 173 (421)
Q Consensus 160 li~~g~~~~vLvv~ 173 (421)
.+ .+.++||+++
T Consensus 282 ~~--~~Gd~vll~~ 293 (345)
T TIGR00748 282 IA--EPGDRILAVS 293 (345)
T ss_pred hc--CCCCEEEEEE
Confidence 22 2345666665
No 140
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=94.17 E-value=0.3 Score=49.32 Aligned_cols=85 Identities=12% Similarity=0.184 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHc-----CCCCCceee---eeeCCcchHHHHHHHH
Q 014606 85 LKTVLFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKF-----GLKSNVRSF---HLSGMGCSAGILSISL 156 (421)
Q Consensus 85 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~L-----Gl~~~~~~~---~i~~~~C~g~~~al~~ 156 (421)
+.+...++++++|+++|++++|||.++... .-+..-..++++| |++++.... +..|.+|++...+|..
T Consensus 270 ~~~~~~~~i~~~L~~~gl~~~DId~~v~Hq----~n~~~~~~v~~~l~~~~~gl~~~k~~~~~~~~GNt~sAsipi~L~~ 345 (378)
T PRK06816 270 IVVYTIKPLLELVDKRNLDPDDIDYFLPHY----SSEYFREKIVELLAKAGFMIPEEKWFTNLATVGNTGSASIYIMLDE 345 (378)
T ss_pred hHHHHHHHHHHHHHHcCCChhhCCEEeeCc----ccHHHHHHHHHHHHhccCCCChhheEEeccccccccchHHHHHHHH
Confidence 445668889999999999999999998654 2233445667766 887443222 3344556666666654
Q ss_pred HHHHHHcc---CCCeEEEEEecc
Q 014606 157 AKDLLRVQ---KNSLALVLSMES 176 (421)
Q Consensus 157 A~~li~~g---~~~~vLvv~~e~ 176 (421)
+ ++.| +.++|++++.+.
T Consensus 346 a---~~~g~~~~Gd~vl~~~~~s 365 (378)
T PRK06816 346 L---LNSGRLKPGQKILCFVPES 365 (378)
T ss_pred H---HHcCCCCCCCEEEEEEecc
Confidence 4 4444 468888887764
No 141
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=94.03 E-value=0.18 Score=49.69 Aligned_cols=84 Identities=7% Similarity=0.112 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHHcc-
Q 014606 86 KTVLFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLRVQ- 164 (421)
Q Consensus 86 ~~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~~g- 164 (421)
.....++++++|+++|++++|||++++.. .-+.....++++||++++-....+...|-.+...-+..-..+++.|
T Consensus 225 ~~~~~~~i~~~L~~~g~~~~did~~~~hq----~~~~~~~~~~~~lgl~~~k~~~~l~~~Gn~~sasi~~~L~~~~~~g~ 300 (326)
T CHL00203 225 VFQVPAVIIKCLNALNISIDEVDWFILHQ----ANKRILEAIANRLSVPNSKMITNLEKYGNTSAASIPLALDEAIQNNK 300 (326)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHhCCCHHHhhhHHHhhCcHHHHHHHHHHHHHHHhCC
Confidence 34567788999999999999999998765 2234556789999998543333333334333333333334445554
Q ss_pred --CCCeEEEEE
Q 014606 165 --KNSLALVLS 173 (421)
Q Consensus 165 --~~~~vLvv~ 173 (421)
+.+++|+++
T Consensus 301 ~~~Gd~vll~~ 311 (326)
T CHL00203 301 IQPGQIIVLSG 311 (326)
T ss_pred CCCCCEEEEEE
Confidence 356777766
No 142
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=93.76 E-value=0.25 Score=48.70 Aligned_cols=86 Identities=10% Similarity=0.157 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHHc
Q 014606 84 ELKTVLFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLRV 163 (421)
Q Consensus 84 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~~ 163 (421)
.+.....++.+++|+++|++++|||.+++... -...-..++++||++++.....+...|-.+...-+..-..++++
T Consensus 227 ~~~~~~~~~i~~~L~~~gl~~~did~~~~H~~----~~~~~~~i~~~l~l~~e~~~~~~~~~Gn~~sas~~~~L~~~~~~ 302 (329)
T PRK07204 227 LSSKYLMKFIDKLLMDAGYTLADIDLIVPHQA----SGPAMRLIRKKLGVDEERFVTIFEDHGNMIAASIPVALFEAIKQ 302 (329)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEeCCC----CHHHHHHHHHHcCCCHHHhhhhHhhhCcHHHHHHHHHHHHHHHc
Confidence 34556778899999999999999999987541 11235688999999854333222222333322222233345555
Q ss_pred c---CCCeEEEEE
Q 014606 164 Q---KNSLALVLS 173 (421)
Q Consensus 164 g---~~~~vLvv~ 173 (421)
+ +.+++|+++
T Consensus 303 g~~~~Gd~vll~~ 315 (329)
T PRK07204 303 KKVQRGNKILLLG 315 (329)
T ss_pred CCCCCCCEEEEEE
Confidence 4 356777766
No 143
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=93.74 E-value=0.32 Score=48.09 Aligned_cols=87 Identities=10% Similarity=0.117 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCCceeee---eeCCcchHHHHHHHHHHH
Q 014606 83 EELKTVLFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSNVRSFH---LSGMGCSAGILSISLAKD 159 (421)
Q Consensus 83 ~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~~~~~~---i~~~~C~g~~~al~~A~~ 159 (421)
+.......++.+++|+++|++++|||.+++.. .-+..-..+.++||++++..... ..|.++++...+|. .
T Consensus 235 ~~~~~~~~~~~~~~L~~~g~~~~did~~i~H~----~~~~~~~~~~~~lgl~~~k~~~~~~~~GN~~sas~~~~L~---~ 307 (338)
T PRK09258 235 KEGVELAVDTWEAFLAQLGWAVEQVDRVICHQ----VGAAHTRAILKALGIDPEKVFTTFPTLGNMGPASLPITLA---M 307 (338)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEecCC----CCHHHHHHHHHHhCCCHHHceehHhhhCCcHHhHHHHHHH---H
Confidence 44556777889999999999999999988754 22345568899999985433322 22233333334443 3
Q ss_pred HHHcc---CCCeEEEEEecc
Q 014606 160 LLRVQ---KNSLALVLSMES 176 (421)
Q Consensus 160 li~~g---~~~~vLvv~~e~ 176 (421)
+++.| +.+++|+++...
T Consensus 308 ~~~~g~~~~Gd~vll~~~G~ 327 (338)
T PRK09258 308 AAEEGFLKPGDRVALLGIGS 327 (338)
T ss_pred HHHhCCCCCCCEEEEEEech
Confidence 34443 357788777543
No 144
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=93.66 E-value=0.25 Score=48.44 Aligned_cols=83 Identities=12% Similarity=0.143 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCCceeeeeeCCc---chHHHHHHHHHHHHH
Q 014606 85 LKTVLFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSNVRSFHLSGMG---CSAGILSISLAKDLL 161 (421)
Q Consensus 85 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~---C~g~~~al~~A~~li 161 (421)
+.+...++.+++|+++|++++|||.+++.. ..+.....++++||++.+.....+...| |++...+| ..++
T Consensus 223 ~~~~~~~~i~~~L~~~g~~~~did~~~~h~----~~~~~~~~~~~~lg~~~~~~~~~~~~~Gn~~sas~~~~L---~~~~ 295 (325)
T PRK12879 223 AVRTMPKGARQVLEKAGLTKDDIDWVIPHQ----ANLRIIESLCEKLGIPMEKTLVSVEYYGNTSAATIPLAL---DLAL 295 (325)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHcCCCHHHhhhhHhhhCchHHHHHHHHH---HHHH
Confidence 344556788999999999999999998764 2344557899999997443222222223 34444444 3445
Q ss_pred Hcc---CCCeEEEEEe
Q 014606 162 RVQ---KNSLALVLSM 174 (421)
Q Consensus 162 ~~g---~~~~vLvv~~ 174 (421)
+.+ +.+++|+++.
T Consensus 296 ~~g~~~~Gd~vll~~~ 311 (325)
T PRK12879 296 EQGKIKPGDTLLLYGF 311 (325)
T ss_pred HcCCCCCCCEEEEEEE
Confidence 554 3467777663
No 145
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=93.36 E-value=0.18 Score=51.38 Aligned_cols=95 Identities=11% Similarity=-0.014 Sum_probs=55.7
Q ss_pred hhhhcCCCCCCCCCCCCCccccccEEEecCCCHHHHHHHHHHCCCCh--hhhHHHHHHHhccCCCccchHHHHHHHHHHc
Q 014606 288 TWKKIWPPGRKRGPYIPDFRKAFEHFCVHAGGKAVIDAIKENLKLKD--RDVEASKTTLYRFGNTSSSSVWYELSYLEAK 365 (421)
Q Consensus 288 i~~~l~~~gl~~~~~~~~~~~did~~i~Hq~~~~~~~~i~~~lgl~~--~~~~~s~~~l~~~Gn~~sasi~i~L~~~~~~ 365 (421)
+.++++++|++ ++|||.+-+|-.-.-..-...+.||+.. .++..+ --.-.+||...|+=...+.++..+
T Consensus 302 ~~~a~~~agl~--------~~did~~ei~d~Fa~~~l~~~e~lg~~~~~~~vN~~-GG~la~GhP~gAtG~~~~~el~~q 372 (401)
T PRK08131 302 IKKALARAGLT--------LDDMDIIEINEAFASQVLGCLKGLGVDFDDPRVNPN-GGAIAVGHPLGASGARLALTAARE 372 (401)
T ss_pred HHHHHHHcCCC--------HHHCCeehhccHHHHHHHHHHHHcCCCCCCCCccCC-ccHHhcCCchhhhHHHHHHHHHHH
Confidence 44667788998 4999999999877665555778999853 344211 122348999877766666665442
Q ss_pred CCCCCCCe-EEEEeecccccccceeeee
Q 014606 366 GKVKKGDK-IWQLAFGSGFKCNSAVWKC 392 (421)
Q Consensus 366 g~~~~Gd~-vll~~~G~G~~~~~~llr~ 392 (421)
=+-+.|.+ +..+..|.|.. .+++++.
T Consensus 373 L~~~~~~~~~~~~~~ggg~g-~a~i~e~ 399 (401)
T PRK08131 373 LQRRGKRYAVVSLCIGVGQG-LAMVIER 399 (401)
T ss_pred HHhcCCCceEEEEEecCChh-hEEEEEe
Confidence 11112222 33334444443 4466654
No 146
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=93.26 E-value=0.32 Score=47.84 Aligned_cols=84 Identities=14% Similarity=0.156 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCCceeeee--e-CCcchHHHHHHHHHHHH
Q 014606 84 ELKTVLFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSNVRSFHL--S-GMGCSAGILSISLAKDL 160 (421)
Q Consensus 84 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~~~~~~i--~-~~~C~g~~~al~~A~~l 160 (421)
.+.+...++.+++|+++|++++|||.+++.. ..+..-..+.++||++++.....+ . |.++++...+| ..+
T Consensus 224 ~~~~~~~~~~~~~L~~~gl~~~did~~~~h~----~~~~~~~~~~~~l~l~~~k~~~~l~~~Gn~~sas~~~~L---~~~ 296 (326)
T PRK05963 224 EAVRMMSGASQNVLASAAMTPQDIDRFFPHQ----ANARIVDKVCETIGIPRAKAASTLETYGNSSAATIPLSL---SLA 296 (326)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEeCC----CCHHHHHHHHHHcCCCHHHhhhhHHhhCcHHHHHHHHHH---HHH
Confidence 3556677889999999999999999988744 224456678999999854332222 2 22333333344 334
Q ss_pred HHcc---CCCeEEEEEe
Q 014606 161 LRVQ---KNSLALVLSM 174 (421)
Q Consensus 161 i~~g---~~~~vLvv~~ 174 (421)
++.+ +.+++|+++.
T Consensus 297 ~~~~~~~~Gd~vll~~~ 313 (326)
T PRK05963 297 NLEQPLREGERLLFAAA 313 (326)
T ss_pred HHhCCCCCCCEEEEEEE
Confidence 4443 3577777774
No 147
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=92.91 E-value=0.48 Score=47.80 Aligned_cols=83 Identities=13% Similarity=0.211 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCCceeeeee---CCcchHHHHHHHHHHHH
Q 014606 84 ELKTVLFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSNVRSFHLS---GMGCSAGILSISLAKDL 160 (421)
Q Consensus 84 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~~~~~~i~---~~~C~g~~~al~~A~~l 160 (421)
.+.....++++++|+++|++++|||.++.... -+..-..++++||++++.....+. |.++++...+| ..+
T Consensus 277 ~~~~~~~~~i~~~L~~~gl~~~dId~~v~Hq~----n~~~~~~~~~~Lgl~~ek~~~~l~~~GNt~sAsi~~~L---~~~ 349 (379)
T PLN02326 277 FAVRCVPQVIESALQKAGLTAESIDWLLLHQA----NQRIIDAVAQRLGIPPEKVISNLANYGNTSAASIPLAL---DEA 349 (379)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHcCCCHHHeeecHhhcCcHHHHHHHHHH---HHH
Confidence 34455667889999999999999999887541 223445689999998643333332 23333333444 344
Q ss_pred HHcc---CCCeEEEEE
Q 014606 161 LRVQ---KNSLALVLS 173 (421)
Q Consensus 161 i~~g---~~~~vLvv~ 173 (421)
++.+ +.+++|+++
T Consensus 350 ~~~g~~~~Gd~vll~~ 365 (379)
T PLN02326 350 VRSGKVKKGDVIATAG 365 (379)
T ss_pred HHcCCCCCCCEEEEEE
Confidence 4544 356677766
No 148
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=92.90 E-value=0.4 Score=48.94 Aligned_cols=73 Identities=19% Similarity=0.252 Sum_probs=50.9
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCCceeeeeeCC--------cchHHHHHHHHHHHHH
Q 014606 90 FSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSNVRSFHLSGM--------GCSAGILSISLAKDLL 161 (421)
Q Consensus 90 ~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~--------~C~g~~~al~~A~~li 161 (421)
..|++++|+++|++++|||.+.+.- ..........+.||+.. ..+.+++. |++|....+.+..++.
T Consensus 318 ~~Ai~~aL~~AGl~~~DID~~ei~e----aFa~~~l~~~~~lg~~~--~~vN~~GG~ia~GHp~GaTGa~~v~~ll~qL~ 391 (417)
T PRK06025 318 VPAAKKVLAKAGLTKDDIDLWEINE----AFAVVAEKFIRDLDLDR--DKVNVNGGAIALGHPIGATGSILIGTVLDELE 391 (417)
T ss_pred HHHHHHHHHHcCCCHHHCcEEEEch----HHHHHHHHHHHHcCCCh--hhccccCCHHhcCCchhHHHHHHHHHHHHHHH
Confidence 5799999999999999999987542 12234456778888763 34555542 5677777777778887
Q ss_pred HccCCCeE
Q 014606 162 RVQKNSLA 169 (421)
Q Consensus 162 ~~g~~~~v 169 (421)
+.+ .++.
T Consensus 392 ~~g-~~~G 398 (417)
T PRK06025 392 RRG-LKRG 398 (417)
T ss_pred HhC-CCeE
Confidence 665 3444
No 149
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=92.85 E-value=0.52 Score=52.91 Aligned_cols=326 Identities=13% Similarity=0.142 Sum_probs=175.1
Q ss_pred CCceEEEEeeeecCCCCCccCHHHHHHHHHHc-CCCChHHHHHHHHHHHHcCCCCceec-------CCCCCCCCCCCChH
Q 014606 8 SKRVYLVDFICYKAPESLRAPISAFIEHTERS-GTFDSKAVEFQTKVLERSGVGNETCL-------PCGTHLLPADGSLN 79 (421)
Q Consensus 8 ~~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~-~~~~~~~~~~~~~i~~~~GI~~R~~~-------~~~~~~~~~~~s~~ 79 (421)
...+.|.|+.--+|+- -..++|-..+-.. ...+++.. +|-.--+|+.+|+=- +...+...+...
T Consensus 10 ~edIvIsG~sgklPes---~nv~eF~~nLl~g~DmVtdd~r---rW~~G~ygLP~r~gKlKdL~kFDa~ff~vh~KQa-- 81 (2376)
T KOG1202|consen 10 QEDIVISGMSGKLPES---DNVKEFGDNLLAGVDMVTDDPR---RWEAGLYGLPKRSGKLKDLNKFDAGFFGVHPKQA-- 81 (2376)
T ss_pred CCcEEEeccCCCCCCc---ccHHHHhhhhhcccccccCCcc---cccccccCCchhhcchhhhhhhcccccCcCcccc--
Confidence 4568899999999986 4456665543211 01111111 222222344443310 111111111110
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCCcc-----EEEEeccC---C-----------CCCCc-----HHHHHHHHcCCCC
Q 014606 80 SSMEELKTVLFSIVQDLFSKHKINPKSID-----ILITNCSV---S-----------CPTPS-----VAAMVINKFGLKS 135 (421)
Q Consensus 80 ~~~~~~~~la~~Aa~~aL~~ag~~~~~Id-----~li~~ss~---~-----------~~~p~-----~a~~l~~~LGl~~ 135 (421)
..+..-..|-.++--+|+=++|+.|.+.. ..+-++.+ + |.+-+ .+++|.--+.+.
T Consensus 82 ~~MDPq~RlLLE~t~EAivDaGiNP~~LRGs~tGv~vg~s~seTs~~~~~dp~t~~Gy~mtgc~raMfaNRiSytFDfq- 160 (2376)
T KOG1202|consen 82 NTMDPQLRLLLEATWEAIVDAGINPDDLRGSRTGVFVGVSGSETSGALSQDPDTVNGYSMTGCVRAMFANRISYTFDFQ- 160 (2376)
T ss_pred cccCHHHHHHHHHHHHHHHhCCCChhhcCcccceeEEeecCccccccccCCCccccceeecccHHHHhhcceeEEEecc-
Confidence 01122357889999999999999997653 33333321 1 11111 234444445564
Q ss_pred CceeeeeeCCcchHHHHHHHHHHHHHHccCCCeEEEEEeccccCCC---c--c-C---CC-----ccchhhhcccccCcE
Q 014606 136 NVRSFHLSGMGCSAGILSISLAKDLLRVQKNSLALVLSMESVSSNG---Y--Q-G---KV-----KYMQLANCLFRMGGA 201 (421)
Q Consensus 136 ~~~~~~i~~~~C~g~~~al~~A~~li~~g~~~~vLvv~~e~~s~~~---~--~-~---~d-----~~~~~~~~lfGDGAa 201 (421)
.+.|.+. .+|++.+.+|+.|.+-+++|+++.++|-++-..-... + + + .| .+..-..+.=+||++
T Consensus 161 -GPS~s~D-tacsSsl~al~~a~~~~r~gqcd~AiVaG~~liLkPt~slQFlRLgmls~dGsCkaFDeagnGY~Rseg~~ 238 (2376)
T KOG1202|consen 161 -GPSFSVD-TACSSSLMALQNAFQDIRSGQCDAAIVAGANLILKPTTSLQFLRLGMLSPDGSCKAFDEAGNGYCRSEGVV 238 (2376)
T ss_pred -CCchhhh-hhhHHHHHHHHHHHHhhhccCCchhhhcccceEeccchhhHHHHhcCcCCCCcccchhccCCceeecCceE
Confidence 5788889 6999999999999999999999999999987754321 1 0 0 00 011113456689999
Q ss_pred EEEEecCCccccccceeeeeeeeeeecCCCccceeeeeeccCCCcceeeeChhhhHHHHHHHHHHHHHhhhhccchhHHH
Q 014606 202 GILLSNKKEDRQRAKYELQHLVRTHLGSKDTAYKCVFQEHDDEGFTGVSLSRSILQVAGEALKANMATLAAMVLPYSELV 281 (421)
Q Consensus 202 A~lL~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (421)
|++|.+..... ..|. .+++....|||..-..+ .|+. .+ +..
T Consensus 239 avllqrk~~Ar--RvYA--tilnartNTDGfKEqGv----------TfP~-G~---~Q~--------------------- 279 (2376)
T KOG1202|consen 239 AVLLQRKSLAR--RVYA--TILNARTNTDGFKEQGV----------TFPS-GD---MQE--------------------- 279 (2376)
T ss_pred EEEEehhHHHH--HHHH--HhhccccCCCchhhcCc----------cCCC-cH---HHH---------------------
Confidence 99999876542 1121 34444555555221111 1211 11 000
Q ss_pred HHHHHhhhhhcCCCCCCCCCCCCCccccccEEEecCCCHHH-----HHHHHHHCCCChh---hhHHHHHHHhccCCCccc
Q 014606 282 WYAVSVTWKKIWPPGRKRGPYIPDFRKAFEHFCVHAGGKAV-----IDAIKENLKLKDR---DVEASKTTLYRFGNTSSS 353 (421)
Q Consensus 282 ~~~~~~i~~~l~~~gl~~~~~~~~~~~did~~i~Hq~~~~~-----~~~i~~~lgl~~~---~~~~s~~~l~~~Gn~~sa 353 (421)
+.+.+.-.++|+.| +++-++-.|-.+-++ ...+.+.|=-.+. -+ -++-.+.||.-.|
T Consensus 280 ----qLi~e~Yse~Gl~P--------~sv~YvEAHGtGTkVGDpQEaN~it~~fC~~Rt~pLLI---GSvKSNMGHaEPA 344 (2376)
T KOG1202|consen 280 ----QLIRETYSEAGLNP--------ESVVYVEAHGTGTKVGDPQEANGITRFFCATRTTPLLI---GSVKSNMGHAEPA 344 (2376)
T ss_pred ----HHHHHHHHhcCCCc--------ccEEEEEeccCCCCCCChHHhhhHHHHHhhcCCCceEe---eeccccCCCCCcc
Confidence 01112233578885 888788778754322 2223322211110 01 0222456776666
Q ss_pred hHHHHHHHH---HHcCCC-----------------------------CCCCeEEEEeecccccccceeeeeeccCCC
Q 014606 354 SVWYELSYL---EAKGKV-----------------------------KKGDKIWQLAFGSGFKCNSAVWKCISNLRP 398 (421)
Q Consensus 354 si~i~L~~~---~~~g~~-----------------------------~~Gd~vll~~~G~G~~~~~~llr~~~~~~~ 398 (421)
|=..+|... +|+|.+ -+|..|-+=+||-|.+-.-++|+-.+...|
T Consensus 345 SGv~alaKillsmE~glip~NLHy~tPNp~ip~L~dGrLkVVd~~lp~~GGivGiNSFGFGGsN~HviLks~~~~~P 421 (2376)
T KOG1202|consen 345 SGVCALAKILLSMEEGLIPPNLHYNTPNPEIPALVDGRLKVVDRPLPWRGGIVGINSFGFGGSNAHVILKSNTKPKP 421 (2376)
T ss_pred chHHHHHHHHHHHHhCcCCCccccCCCCCCcchhccceeEEecCCCCccCceeeeeccccCCCceeEEeccCCCCCC
Confidence 655555543 222322 146677788999988888899998877765
No 150
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=92.74 E-value=0.35 Score=47.20 Aligned_cols=84 Identities=15% Similarity=0.274 Sum_probs=53.4
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCCceeeee--e-CCcchHHHHHHHHHHHH
Q 014606 84 ELKTVLFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSNVRSFHL--S-GMGCSAGILSISLAKDL 160 (421)
Q Consensus 84 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~~~~~~i--~-~~~C~g~~~al~~A~~l 160 (421)
...+...++.+++|+++|++++|||.+++.. ..+..-..++++||++++.....+ . +.++++...+| ..+
T Consensus 220 ~~~~~~~~~i~~~l~~~g~~~~di~~~~~h~----~~~~~~~~~~~~lgl~~~~~~~~~~~~Gn~~sas~~~~L---~~~ 292 (320)
T cd00830 220 FAVRLMPESIEEALEKAGLTPDDIDWFVPHQ----ANLRIIEAVAKRLGLPEEKVVVNLDRYGNTSAASIPLAL---DEA 292 (320)
T ss_pred HHHHhhHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHhCCCHHHhhhhHHhhCcHHHHHHHHHH---HHH
Confidence 3456677899999999999999999988764 233445678999999744322222 1 22223333333 344
Q ss_pred HHcc---CCCeEEEEEe
Q 014606 161 LRVQ---KNSLALVLSM 174 (421)
Q Consensus 161 i~~g---~~~~vLvv~~ 174 (421)
++.+ +.+++|+++.
T Consensus 293 ~~~~~~~~G~~vll~~~ 309 (320)
T cd00830 293 IEEGKLKKGDLVLLLGF 309 (320)
T ss_pred HHcCCCCCCCEEEEEEE
Confidence 4554 4678888774
No 151
>PRK06840 hypothetical protein; Validated
Probab=92.69 E-value=0.51 Score=46.67 Aligned_cols=82 Identities=18% Similarity=0.238 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHHcc--
Q 014606 87 TVLFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLRVQ-- 164 (421)
Q Consensus 87 ~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~~g-- 164 (421)
....++++++|+++|++++|||.++... .-+..-..++++||++++.. +-+...|-.+...-+..-..+++++
T Consensus 237 ~~~~~~i~~~L~~~gl~~~did~~~~h~----~~~~~~~~~~~~Lgl~~~~~-~~~~~~Gn~~sas~~~~L~~~~~~~~~ 311 (339)
T PRK06840 237 PNFLKVIREALRKSGYTPKDIDYLAILH----MKRSAHIALLEGLGLTEEQA-IYLDEYGHLGQLDQILSLHLALEQGKL 311 (339)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECC----cCHHHHHHHHHHcCCCHHHe-EeHHhccchhhhhHHHHHHHHHHcCCC
Confidence 3456899999999999999999987644 12334467899999984322 2122223333333232234445554
Q ss_pred -CCCeEEEEE
Q 014606 165 -KNSLALVLS 173 (421)
Q Consensus 165 -~~~~vLvv~ 173 (421)
+.+++|+++
T Consensus 312 ~~Gd~ill~~ 321 (339)
T PRK06840 312 KDGDLVVLVS 321 (339)
T ss_pred CCCCEEEEEE
Confidence 356677766
No 152
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=92.47 E-value=0.6 Score=45.66 Aligned_cols=83 Identities=13% Similarity=0.261 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCCceeeee---eCCcchHHHHHHHHHHHH
Q 014606 84 ELKTVLFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSNVRSFHL---SGMGCSAGILSISLAKDL 160 (421)
Q Consensus 84 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~~~~~~i---~~~~C~g~~~al~~A~~l 160 (421)
...+...++++++|+++|++++|||.+++.. ..+..-..+++.||++++-....+ .|.+|++.+.+|. .+
T Consensus 216 ~~~~~~~~~~~~~l~~~g~~~~di~~~~~h~----~~~~~~~~~~~~lgi~~~k~~~~~~~~Gn~~sas~~~~L~---~~ 288 (318)
T TIGR00747 216 HAVRKMGDVVEETLEANGLDPEDIDWFVPHQ----ANLRIIEALAKRLELDMSQVVKTVHKYGNTSAASIPLALD---EL 288 (318)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHcCCCHHHeeehHhhhCCHHHHHHHHHHH---HH
Confidence 4455567789999999999999999998654 233456788999999843222222 1233344444443 34
Q ss_pred HHcc---CCCeEEEEE
Q 014606 161 LRVQ---KNSLALVLS 173 (421)
Q Consensus 161 i~~g---~~~~vLvv~ 173 (421)
++++ +.+++|+++
T Consensus 289 ~~~~~~~~Gd~vll~~ 304 (318)
T TIGR00747 289 LRTGRIKPGDLLLLVA 304 (318)
T ss_pred HHcCCCCCCCEEEEEE
Confidence 4444 346777766
No 153
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=92.18 E-value=0.59 Score=45.67 Aligned_cols=84 Identities=14% Similarity=0.219 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCCceeeee--e-CCcchHHHHHHHHHHHH
Q 014606 84 ELKTVLFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSNVRSFHL--S-GMGCSAGILSISLAKDL 160 (421)
Q Consensus 84 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~~~~~~i--~-~~~C~g~~~al~~A~~l 160 (421)
.......++.+++|+++|++++|||.++... ..+..-..++++||++++.....+ . +.+|++.+..| ..+
T Consensus 216 ~~~~~~~~~i~~~l~~~g~~~~di~~~~~h~----~~~~~~~~~~~~lg~~~~~~~~~~~~~Gn~~~a~~~~~L---~~~ 288 (319)
T PRK09352 216 FAVRELAKVAREALEAAGLTPEDIDWLVPHQ----ANLRIIDATAKKLGLPMEKVVVTVDKYGNTSAASIPLAL---DEA 288 (319)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHhCCCHHHhhhhHHhhCCHHHHHHHHHH---HHH
Confidence 3445567789999999999999999998754 233455678999999854322222 1 12233333333 344
Q ss_pred HHcc---CCCeEEEEEe
Q 014606 161 LRVQ---KNSLALVLSM 174 (421)
Q Consensus 161 i~~g---~~~~vLvv~~ 174 (421)
++.| +.+++|+++.
T Consensus 289 ~~~g~~~~Gd~vll~s~ 305 (319)
T PRK09352 289 VRDGRIKRGDLVLLEGF 305 (319)
T ss_pred HHcCCCCCCCEEEEEEE
Confidence 4544 3567777663
No 154
>PRK04262 hypothetical protein; Provisional
Probab=91.60 E-value=0.45 Score=47.37 Aligned_cols=81 Identities=16% Similarity=0.228 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCCceee-----eeeCCcchHHHHHHHHHHHHH
Q 014606 87 TVLFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSNVRSF-----HLSGMGCSAGILSISLAKDLL 161 (421)
Q Consensus 87 ~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~~~~~-----~i~~~~C~g~~~al~~A~~li 161 (421)
....++.+++|+++|++++|||.+++.. .-+..-..++++||++++-... ...|.++++...+|..+..
T Consensus 209 ~~~~~~i~~~L~~~gl~~~dId~~v~Hq----~n~~~~~~~~~~Lgl~~ek~~~~~~~~~~GNt~sAsi~~~L~~~~~-- 282 (347)
T PRK04262 209 KHIISAAKGLMEKLGLKPSDYDYAVFHQ----PNGKFPLRVAKMLGFTKEQVKPGLLTPYIGNTYSGSALLGLAAVLD-- 282 (347)
T ss_pred HHHHHHHHHHHHHhCcCHHHhceeecCC----CchHHHHHHHHHcCCCHHHhhccchhhhhCChHHHHHHHHHHHHHH--
Confidence 4677889999999999999999988753 2234556789999998543221 3333444555555544332
Q ss_pred HccCCCeEEEEE
Q 014606 162 RVQKNSLALVLS 173 (421)
Q Consensus 162 ~~g~~~~vLvv~ 173 (421)
+..+.+++|+++
T Consensus 283 ~~~~Gd~vll~~ 294 (347)
T PRK04262 283 VAKPGDRILVVS 294 (347)
T ss_pred hCCCCCEEEEEe
Confidence 222345555554
No 155
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=91.22 E-value=0.35 Score=47.53 Aligned_cols=89 Identities=12% Similarity=0.224 Sum_probs=56.6
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHH
Q 014606 81 SMEELKTVLFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDL 160 (421)
Q Consensus 81 ~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~l 160 (421)
..+.++.+..++++++|++++++++|||.++... .-...-..++++||++++-....+.-.|=++...-...-..+
T Consensus 217 vfk~av~~~~~~~~~~L~~~~l~~~dId~~vpHQ----an~ri~~~i~~~l~~~~~k~~~~~~~yGNtsaAsiplaL~~~ 292 (323)
T COG0332 217 VFKFAVRAMPKAIEEVLEKAGLTPEDIDWFVPHQ----ANLRIIEAIAKKLGIPEEKVVVTVDKYGNTSAASIPLALDEA 292 (323)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEcccc----ccHHHHHHHHHHcCCCHHHHhhHHHHhcccccchHHHHHHHH
Confidence 3466889999999999999999999999998543 233455788999999755444444322322222222222344
Q ss_pred HHccC---CCeEEEEE
Q 014606 161 LRVQK---NSLALVLS 173 (421)
Q Consensus 161 i~~g~---~~~vLvv~ 173 (421)
++.|. .+.+|+++
T Consensus 293 ~~~g~ik~Gd~ill~~ 308 (323)
T COG0332 293 LREGRIKPGDLVLLEA 308 (323)
T ss_pred hhhCCCCCCCEEEEEe
Confidence 45553 35555544
No 156
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=91.08 E-value=0.5 Score=48.58 Aligned_cols=68 Identities=9% Similarity=-0.062 Sum_probs=44.1
Q ss_pred hhhhcCCCCCCCCCCCCCccccccEEEecCCCHHHHHHHHHHCC-----------------CChhhhHHHHHHHhccCCC
Q 014606 288 TWKKIWPPGRKRGPYIPDFRKAFEHFCVHAGGKAVIDAIKENLK-----------------LKDRDVEASKTTLYRFGNT 350 (421)
Q Consensus 288 i~~~l~~~gl~~~~~~~~~~~did~~i~Hq~~~~~~~~i~~~lg-----------------l~~~~~~~s~~~l~~~Gn~ 350 (421)
.+++++++|++ ++|||.+-+|-.-....-...+.|| ++.+++..+ --.-.+||.
T Consensus 317 ~~~al~~Agl~--------~~Did~~Ei~daFa~~~l~~~e~lg~~~~~~~~~g~~~~~G~~~~~pvN~~-GG~la~GhP 387 (430)
T TIGR02446 317 TPLALQRAGLA--------LSDLTLIDMHEAFAAQTLANVQMFASDKFAQENLGRSKAMGEIDMSKFNVL-GGSIAYGHP 387 (430)
T ss_pred HHHHHHHcCCC--------HHHCCEEEeccccHHHHHHHHHHhcCcchhhhcccccccCCCCCCCccCCC-CCHHhcCCC
Confidence 34667788998 4999999999987665555556664 443344211 112337999
Q ss_pred ccchHHHHHHHHHH
Q 014606 351 SSSSVWYELSYLEA 364 (421)
Q Consensus 351 ~sasi~i~L~~~~~ 364 (421)
..|+=...+.++.+
T Consensus 388 ~gatG~~~v~e~~~ 401 (430)
T TIGR02446 388 FAATGARMITQTLR 401 (430)
T ss_pred ccccHHHHHHHHHH
Confidence 98877666666554
No 157
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=90.44 E-value=1.3 Score=43.36 Aligned_cols=78 Identities=15% Similarity=0.155 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEec-cCCCCCCcHHHHHHHHcCCCC---CceeeeeeCCcchHHHHHHHHHHHHHH
Q 014606 87 TVLFSIVQDLFSKHKINPKSIDILITNC-SVSCPTPSVAAMVINKFGLKS---NVRSFHLSGMGCSAGILSISLAKDLLR 162 (421)
Q Consensus 87 ~la~~Aa~~aL~~ag~~~~~Id~li~~s-s~~~~~p~~a~~l~~~LGl~~---~~~~~~i~~~~C~g~~~al~~A~~li~ 162 (421)
+...++++++|+++|++++|||.++... .................+..+ ....-.+.+.++++++..|..+...++
T Consensus 205 ~~~~~~i~~al~~agl~~~did~~~~h~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~G~~~aas~~~~l~~~~~~~~ 284 (332)
T cd00825 205 EGLARAAKEALAVAGLTVWDIDYLVAHGTGTPIGDVKELKLLRSEFGDKSPAVSATKAMTGNLSSAAVVLAVDEAVLMLE 284 (332)
T ss_pred HHHHHHHHHHHHHcCCCHhHCCEEEccCCCCCCCCHHHHHHHHHHhCCCCceeECCCcccccchhHhHHHHHHHHHHHHh
Confidence 3456799999999999999999999764 333322222333333343210 011224444566677777766666665
Q ss_pred cc
Q 014606 163 VQ 164 (421)
Q Consensus 163 ~g 164 (421)
.+
T Consensus 285 ~~ 286 (332)
T cd00825 285 HG 286 (332)
T ss_pred cC
Confidence 54
No 158
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=89.88 E-value=2 Score=42.88 Aligned_cols=82 Identities=12% Similarity=0.183 Sum_probs=57.7
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCC-----CCceee-eeeCCcchHHHHHHHHHHH
Q 014606 86 KTVLFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLK-----SNVRSF-HLSGMGCSAGILSISLAKD 159 (421)
Q Consensus 86 ~~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~-----~~~~~~-~i~~~~C~g~~~al~~A~~ 159 (421)
......|++..+++.|++++|.|.+++.+ +.|.+...++..||.+ +..... .|.|..|++...+|. ..
T Consensus 208 ~~~~~~a~~~~~~k~gls~~dfdy~vfH~----P~~k~~~ka~k~l~~~~e~v~~~l~~~~~vGN~YtgS~~L~La--s~ 281 (377)
T COG3425 208 FKHVENAAKGYMEKTGLSPDDFDYIVFHQ----PNGKFPKKAAKSLGFKEEQVKPGLVYPQRIGNTYTGSLLLGLA--SL 281 (377)
T ss_pred HHHHHHHHHHHHHHhCCChhhhCeEEecC----CCCchHHHHHHHhCccHhhcCccchhhhhcCcccchhHHHHHH--HH
Confidence 46778899999999999999999999877 5566777888888876 322222 466677877776663 33
Q ss_pred HHHcc-CCCeEEEEE
Q 014606 160 LLRVQ-KNSLALVLS 173 (421)
Q Consensus 160 li~~g-~~~~vLvv~ 173 (421)
|=.+. +.+++|+++
T Consensus 282 L~~a~~~G~rIl~~S 296 (377)
T COG3425 282 LDNAKLPGDRILLFS 296 (377)
T ss_pred HhhcCCCCCEEEEEe
Confidence 33333 456666655
No 159
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=89.70 E-value=0.88 Score=45.73 Aligned_cols=86 Identities=10% Similarity=0.191 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHH-cCCCCC--c-e--eeeeeCCcchHHHHHHHH
Q 014606 83 EELKTVLFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINK-FGLKSN--V-R--SFHLSGMGCSAGILSISL 156 (421)
Q Consensus 83 ~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~-LGl~~~--~-~--~~~i~~~~C~g~~~al~~ 156 (421)
+.+.+...++.+++|+++|++++|||.+++.... ...-..+.++ ||+... . + .-...|.+|++...+|..
T Consensus 267 ~~~~~~~~~~i~~~L~~~gl~~~dId~~~~Hq~~----~~~~d~~~~~llg~~~~~~~~~~~~~~~GNt~sasi~~~L~~ 342 (372)
T PRK07515 267 KEVCPMVAEHIVEHLAENGLTPADVKRFWLHQAN----INMNQLIGKKVLGRDATPEEAPVILDEYANTSSAGSIIAFHK 342 (372)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCC----HHHHHHHHHHhccCCCChhhceEeHHhcCCchhhHHHHHHHH
Confidence 4456678899999999999999999999875411 1122234555 565321 1 1 113334556666666665
Q ss_pred HHHHHHccCCCeEEEEEe
Q 014606 157 AKDLLRVQKNSLALVLSM 174 (421)
Q Consensus 157 A~~li~~g~~~~vLvv~~ 174 (421)
+..-+ .+.+++|+++.
T Consensus 343 ~~~~~--~~Gd~vll~~~ 358 (372)
T PRK07515 343 HSDDL--AAGDLGVICSF 358 (372)
T ss_pred HhccC--CCCCEEEEEEe
Confidence 53322 24577777663
No 160
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=89.12 E-value=0.91 Score=46.63 Aligned_cols=92 Identities=10% Similarity=0.077 Sum_probs=48.4
Q ss_pred hhhhhcCCCCCCCCCCCCCccccccEEEecCCCHHHHHHHH---HHCC--------------CChhhhHHHHHHHhccCC
Q 014606 287 VTWKKIWPPGRKRGPYIPDFRKAFEHFCVHAGGKAVIDAIK---ENLK--------------LKDRDVEASKTTLYRFGN 349 (421)
Q Consensus 287 ~i~~~l~~~gl~~~~~~~~~~~did~~i~Hq~~~~~~~~i~---~~lg--------------l~~~~~~~s~~~l~~~Gn 349 (421)
.+.++++++|++ ++|||.+-+|-.-....-... +.+| ++.+++..+ --.-.+||
T Consensus 312 a~~~al~~aGl~--------~~did~~ei~daFa~~~l~~l~~le~lGf~~~G~g~~~~~G~~~~~pvN~~-GG~la~GH 382 (426)
T PRK08170 312 AATPLLQRHGLT--------LEDLDLWEINEAFAAQVLACLAAWADEEYCREQLGLDGALGELDRERLNVD-GGAIALGH 382 (426)
T ss_pred HHHHHHHHcCCC--------HHHcCEEEecchhHHHHHHHHHHhccccchhcccccccccCCCCcceecCC-CCHHHhCC
Confidence 345667788998 499999999997553322222 2222 333344211 11223799
Q ss_pred CccchH---HHHHHHHHHcCCCCCCCeEE-EEeecccccccceeee
Q 014606 350 TSSSSV---WYELSYLEAKGKVKKGDKIW-QLAFGSGFKCNSAVWK 391 (421)
Q Consensus 350 ~~sasi---~i~L~~~~~~g~~~~Gd~vl-l~~~G~G~~~~~~llr 391 (421)
...|+= ...|.+.+++ ..|.+.+ .++.|.|.. .+++++
T Consensus 383 P~GAtG~~~~~~l~~~l~~---~~~~~g~~~~c~~gg~g-~a~~~e 424 (426)
T PRK08170 383 PVGASGARIVLHLLHALKR---RGTKRGIAAICIGGGQG-GAMLLE 424 (426)
T ss_pred CccCccHHHHHHHHHHHHh---hCCCeEEEEEecCCChh-heEEEE
Confidence 987776 5555555542 2233433 233444433 445554
No 161
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=88.45 E-value=1.1 Score=44.79 Aligned_cols=87 Identities=13% Similarity=0.151 Sum_probs=49.3
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCCcHHHHHHHHcCCCC-Cceeee----eeCCcchHHHHHHHHHHHHHH
Q 014606 89 LFSIVQDLFSKHKINPKSIDILITN-CSVSCPTPSVAAMVINKFGLKS-NVRSFH----LSGMGCSAGILSISLAKDLLR 162 (421)
Q Consensus 89 a~~Aa~~aL~~ag~~~~~Id~li~~-ss~~~~~p~~a~~l~~~LGl~~-~~~~~~----i~~~~C~g~~~al~~A~~li~ 162 (421)
..++.+++|+++|++++|||.|+.. +.+.+.....+..+.+.+|-.. ..+... +-+.+.+++...+..+...++
T Consensus 236 l~~ai~~AL~~agl~~~dId~v~ah~~gt~~~d~~e~~A~~~~f~~~~~~~~~~~~k~~~Gh~~aAaG~~~~~~a~~~~~ 315 (348)
T PRK06147 236 LTQAIRAALAEAGCGLEDMDYRIADLNGEQYRFKEAALAEMRLFRVRKEFFDLWHPAECIGEIGAAIGPALLGVALAASR 315 (348)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEcCCCCCccchHHHHHHHHHHhhhccCCCceecchHhhcchHHHHHHHHHHHHHHHHH
Confidence 4688999999999999999998864 3222222223344444454311 111111 222233444444444555666
Q ss_pred cc--CCCeEEEEEec
Q 014606 163 VQ--KNSLALVLSME 175 (421)
Q Consensus 163 ~g--~~~~vLvv~~e 175 (421)
.| +..++||.++.
T Consensus 316 ~g~~~g~~~L~~s~~ 330 (348)
T PRK06147 316 KGYGPGPNVLCHLSD 330 (348)
T ss_pred cCcCCCCcEEEEecC
Confidence 66 46788888844
No 162
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=88.16 E-value=2.3 Score=43.91 Aligned_cols=69 Identities=16% Similarity=0.092 Sum_probs=48.5
Q ss_pred hhhhhcCCCCCCCCCCCCCccccccEEEecCCCHHHHHHHHHHCCCChh------------------hhHHHHHHHhccC
Q 014606 287 VTWKKIWPPGRKRGPYIPDFRKAFEHFCVHAGGKAVIDAIKENLKLKDR------------------DVEASKTTLYRFG 348 (421)
Q Consensus 287 ~i~~~l~~~gl~~~~~~~~~~~did~~i~Hq~~~~~~~~i~~~lgl~~~------------------~~~~s~~~l~~~G 348 (421)
...++++++|++ ++|||.+-+|-.-....-...+.||+.+. ++..+ --+-.+|
T Consensus 314 A~~~a~~~AGl~--------~~DiD~~Ei~daFa~~~l~~~e~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~-GG~la~G 384 (438)
T PTZ00455 314 AAQKALSMAGVK--------PSDLQVAEVHDCFTIAELLMYEALGIAEYGHAKDLIRNGATALEGRIPVNTG-GGLLSFG 384 (438)
T ss_pred HHHHHHHHcCCC--------HHHCcEeeecccChHHHHHHHHHcCCCCCCchHHHHhcCCcccCCCceeeCC-CchhhcC
Confidence 344667788998 49999999999988888888899998862 33210 1123379
Q ss_pred CCccchHHHHHHHHHH
Q 014606 349 NTSSSSVWYELSYLEA 364 (421)
Q Consensus 349 n~~sasi~i~L~~~~~ 364 (421)
|...|+=...+.++..
T Consensus 385 HP~gAtG~~~v~e~~~ 400 (438)
T PTZ00455 385 HPVGATGVKQIMEVYR 400 (438)
T ss_pred CCcchHHHHHHHHHHH
Confidence 9987777666665433
No 163
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=88.12 E-value=2.5 Score=39.52 Aligned_cols=78 Identities=12% Similarity=0.085 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEec-cCCCCCCcHHHHHHHHcCCC---CCceeeeeeCCcchHHHHHHHHHHHHHH
Q 014606 87 TVLFSIVQDLFSKHKINPKSIDILITNC-SVSCPTPSVAAMVINKFGLK---SNVRSFHLSGMGCSAGILSISLAKDLLR 162 (421)
Q Consensus 87 ~la~~Aa~~aL~~ag~~~~~Id~li~~s-s~~~~~p~~a~~l~~~LGl~---~~~~~~~i~~~~C~g~~~al~~A~~li~ 162 (421)
+...++++++|+++|++++|||.++... .+...............+.. .....-.+.+.+|+++...|..+...++
T Consensus 145 ~~~~~~i~~~l~~ag~~~~did~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~as~~~~l~~~~~~~~ 224 (254)
T cd00327 145 EGLARAARKALEGAGLTPSDIDYVEAHGTGTPIGDAVELALGLDPDGVRSPAVSATLIMTGHPLGAAGLAILDELLLMLE 224 (254)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEccCCcCccccHHHHHHHHHHhCCCCCceeccccccccchHHHHHHHHHHHHHHHh
Confidence 4567889999999999999999988753 22222221111111222221 0111223334456666666665555555
Q ss_pred cc
Q 014606 163 VQ 164 (421)
Q Consensus 163 ~g 164 (421)
.+
T Consensus 225 ~~ 226 (254)
T cd00327 225 HE 226 (254)
T ss_pred CC
Confidence 54
No 164
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=87.18 E-value=1.8 Score=43.21 Aligned_cols=49 Identities=8% Similarity=0.121 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCC
Q 014606 84 ELKTVLFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSN 136 (421)
Q Consensus 84 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~ 136 (421)
.+.+....+++++|+++|++++|||.+++.. .-...-..+.++||++++
T Consensus 239 ~~~~~~~~~i~~~L~~~gl~~~did~~v~HQ----~~~~i~~~i~~~Lgl~~e 287 (353)
T PRK12880 239 MALECEPKSFKEILEFSKVDEKDIAFHLFHQ----SNAYLVDCIKEELKLNDD 287 (353)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHhCCCHH
Confidence 3456667789999999999999999999765 233456789999999854
No 165
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=86.85 E-value=1.5 Score=44.72 Aligned_cols=52 Identities=13% Similarity=0.232 Sum_probs=35.6
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCCceeeeeeC
Q 014606 89 LFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSNVRSFHLSG 144 (421)
Q Consensus 89 a~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~~~~~~i~~ 144 (421)
...|++++|+++|++++|||.+-+.- ..+...-...+.||+.++...++.++
T Consensus 299 ~~~a~~~al~~Agl~~~DId~~ei~D----~f~~~~l~~~e~lg~~~~~~pvN~~G 350 (401)
T PRK09050 299 PAPATRKLLARLGLTIDQFDVIELNE----AFAAQGLAVLRQLGLADDDARVNPNG 350 (401)
T ss_pred HHHHHHHHHHHcCCCHHHCCccccCc----HhHHHHHHHHHHcCCCCCCCCEeCCC
Confidence 36799999999999999999875321 22333445667889853334556664
No 166
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=85.91 E-value=2.2 Score=42.66 Aligned_cols=84 Identities=12% Similarity=0.159 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHHHHHhC--CCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCCce-----ee-eeeCCcchHHHHHHH
Q 014606 84 ELKTVLFSIVQDLFSKH--KINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSNVR-----SF-HLSGMGCSAGILSIS 155 (421)
Q Consensus 84 ~~~~la~~Aa~~aL~~a--g~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~~~-----~~-~i~~~~C~g~~~al~ 155 (421)
.+.+...++++++|+++ |++++|||.+++... -...-..++++||++++-. .+ +..|.++++...+|.
T Consensus 256 ~~~~~~~~~i~~~L~~~~~g~~~~did~~~~H~~----~~~i~~~v~~~lgl~~~~~~~s~~~l~~~GN~~sasi~~~L~ 331 (361)
T cd00831 256 LVEKNLERVLRKLLARLGIGLFKLAFDHWCVHPG----GRAVLDAVEKALGLSPEDLEASRMVLRRYGNMSSSSVLYVLA 331 (361)
T ss_pred HHHHHHHHHHHHHhccccCCCccccceEEEECCC----ChHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhccHHHHHH
Confidence 34566777899999999 999999999987652 2234457899999974321 12 333344445555554
Q ss_pred HHHHHHHcc---CCCeEEEEEe
Q 014606 156 LAKDLLRVQ---KNSLALVLSM 174 (421)
Q Consensus 156 ~A~~li~~g---~~~~vLvv~~ 174 (421)
.+ ++.+ +.+++|+++.
T Consensus 332 ~~---~~~g~~~~Gd~vll~~~ 350 (361)
T cd00831 332 YM---EAKGRVKRGDRGLLIAF 350 (361)
T ss_pred HH---HHhCCCCCCCEEEEEEE
Confidence 33 4444 3577777763
No 167
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=85.09 E-value=1.9 Score=43.84 Aligned_cols=52 Identities=17% Similarity=0.245 Sum_probs=35.0
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCCceeeeeeC
Q 014606 89 LFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSNVRSFHLSG 144 (421)
Q Consensus 89 a~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~~~~~~i~~ 144 (421)
...|++++|+++|++++|||.+-+.- ......-...+.||+..+...++.++
T Consensus 298 ~~~A~~~al~~AGl~~~DID~iei~d----afa~~~l~~~e~lg~~~~~~pvN~~G 349 (400)
T PRK13359 298 PAPATQKLLARLGMTLDQFDVIELNE----AFASQGLAVLRELGLADDDARVNPNG 349 (400)
T ss_pred HHHHHHHHHHHhCCCHHHcCcCccCc----HhHHHHHHHHHHcCCCCCCCCEECCC
Confidence 36899999999999999999876321 12233445567888743334556654
No 168
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=84.63 E-value=3.2 Score=43.57 Aligned_cols=80 Identities=18% Similarity=0.210 Sum_probs=51.1
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCC-ceeeeeeCCcc--------hHHHHHHHHHHH
Q 014606 89 LFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSN-VRSFHLSGMGC--------SAGILSISLAKD 159 (421)
Q Consensus 89 a~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~-~~~~~i~~~~C--------~g~~~al~~A~~ 159 (421)
...|+++|++++|++++|||.+=+-. .+|.......+.||+.++ -..+.+++ |. +.+++.+..+..
T Consensus 294 ~~~aa~~a~~~AGi~~~Did~~elyd----cF~~~~~~~~E~LGl~~~g~~pvN~sG-Gl~s~G~P~~a~g~~~i~E~v~ 368 (498)
T PRK08257 294 IRAAGRRALALAGLGIDDIDAFDLYS----CFPSAVQVAARELGLDLDDPRPLTVTG-GLPFFGGPGNNYVTHAIAEMVE 368 (498)
T ss_pred HHHHHHHHHHHhCCCHHHCCEEEecc----CCHHHHHHHHHHcCcCCCCCCCcCCCc-ChhhcCCchhhHHHHHHHHHHH
Confidence 34699999999999999999887643 245555666789998743 12455543 43 224555544455
Q ss_pred HHHccCCCeEEEEE
Q 014606 160 LLRVQKNSLALVLS 173 (421)
Q Consensus 160 li~~g~~~~vLvv~ 173 (421)
.|+....++.|+.+
T Consensus 369 QLRg~~~~~gLv~~ 382 (498)
T PRK08257 369 RLRANPGRRGLVTA 382 (498)
T ss_pred HHhhcCCCEEEEEC
Confidence 55544456666654
No 169
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=83.30 E-value=3.8 Score=41.14 Aligned_cols=71 Identities=15% Similarity=0.174 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCCceeeeee--------CCcchHHHHHHHHHHH
Q 014606 88 VLFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSNVRSFHLS--------GMGCSAGILSISLAKD 159 (421)
Q Consensus 88 la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~~~~~~i~--------~~~C~g~~~al~~A~~ 159 (421)
-...|++++|+++|++++|||.+...- ..........+.||+.+. .+..+ -.|++|......+..+
T Consensus 259 ~~~~a~~~al~~Agl~~~Did~~ei~e----afa~~~~~~~e~lgl~~~--~vn~~GG~la~Ghp~GatG~~~~~~~~~q 332 (361)
T PRK06690 259 GPIFAVNKLLNEMNMKVEDIDYFEINE----AFASKVVACAKELQIPYE--KLNVNGGAIALGHPYGASGAMLVTRLFYQ 332 (361)
T ss_pred HHHHHHHHHHHHcCCCHHHcCEeeecc----hhHHHHHHHHHhcCCCch--hcccCCcHHhccCchhhhHHHHHHHHHHH
Confidence 457899999999999999999987632 223344556678887632 23332 1366777777777777
Q ss_pred HHHcc
Q 014606 160 LLRVQ 164 (421)
Q Consensus 160 li~~g 164 (421)
+-+.+
T Consensus 333 l~~~~ 337 (361)
T PRK06690 333 AKRED 337 (361)
T ss_pred HHHhC
Confidence 76543
No 170
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=82.49 E-value=4.2 Score=41.77 Aligned_cols=94 Identities=11% Similarity=0.054 Sum_probs=48.9
Q ss_pred hhhhcCCCCCCCCCCCCCccccccEEEecCCCHHHHHHHH---HHCCC--------------ChhhhHHHHHHHhccCCC
Q 014606 288 TWKKIWPPGRKRGPYIPDFRKAFEHFCVHAGGKAVIDAIK---ENLKL--------------KDRDVEASKTTLYRFGNT 350 (421)
Q Consensus 288 i~~~l~~~gl~~~~~~~~~~~did~~i~Hq~~~~~~~~i~---~~lgl--------------~~~~~~~s~~~l~~~Gn~ 350 (421)
..++++++|++ ++|||.+=+|-.-....-... +.+|+ +..++..+ --.-.+||.
T Consensus 315 ~~~a~~~AGl~--------~~Did~~Ei~d~Fa~~~l~~l~~~e~lG~~~~g~g~~~~~G~~~~~pvN~~-GG~la~GhP 385 (427)
T PRK09268 315 VPRLLARNGLT--------LQDFDFYEIHEAFASQVLATLKAWEDEEYCRERLGLDAPLGSIDRSKLNVN-GSSLAAGHP 385 (427)
T ss_pred HHHHHHHcCCC--------HHHCCEEEeccccHHHHHHHHHHhhhccccccccccccccCcCCCcccCCC-cCHHhcCCC
Confidence 34566778998 499999999998654422222 33333 21222100 011227899
Q ss_pred ccchHHHHHHHHHHcCCCCCCCeEEE-Eeecccccccceeee
Q 014606 351 SSSSVWYELSYLEAKGKVKKGDKIWQ-LAFGSGFKCNSAVWK 391 (421)
Q Consensus 351 ~sasi~i~L~~~~~~g~~~~Gd~vll-~~~G~G~~~~~~llr 391 (421)
..|+=...+.++.++=+-+.|.+.+. ++.|.|. -.+++++
T Consensus 386 ~gATG~~~v~e~~~QL~~~~~~~gl~~~c~~gG~-g~a~~~e 426 (427)
T PRK09268 386 FAATGGRIVATLAKLLAEKGSGRGLISICAAGGQ-GVTAILE 426 (427)
T ss_pred cccchHHHHHHHHHHHHhcCCCEEEEEEcccCch-heEEEEe
Confidence 87776666666554322134455443 3333333 3445554
No 171
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=81.79 E-value=3.3 Score=42.19 Aligned_cols=67 Identities=15% Similarity=0.293 Sum_probs=42.4
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCCceeeeeeC--------CcchHHHHHHHHHHHHH
Q 014606 90 FSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSNVRSFHLSG--------MGCSAGILSISLAKDLL 161 (421)
Q Consensus 90 ~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~~~~~~i~~--------~~C~g~~~al~~A~~li 161 (421)
..|++++|+++|++++|||.+=+.- .+....-...+.||+.+ ..+.+++ .|++|....+.++.+|-
T Consensus 303 ~~a~~~al~~AGl~~~DID~~ei~d----aFa~~~l~~~e~lG~~~--~~vN~~GG~la~GHP~GAsG~~~~~~l~~~L~ 376 (402)
T PRK08242 303 VPATRKALAKAGLTVDDIDLFELNE----AFASVVLRFMQALDIPH--DKVNVNGGAIAMGHPLGATGAMILGTVLDELE 376 (402)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEecc----hhhHHHHHHHHHhCCCC--cCCCcCCCHHhcCCcHHHHHHHHHHHHHHHHH
Confidence 5699999999999999999886431 23344455678888753 2344443 13344444455555554
Q ss_pred H
Q 014606 162 R 162 (421)
Q Consensus 162 ~ 162 (421)
+
T Consensus 377 ~ 377 (402)
T PRK08242 377 R 377 (402)
T ss_pred h
Confidence 4
No 172
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=81.56 E-value=2.9 Score=42.51 Aligned_cols=70 Identities=16% Similarity=0.265 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCCceeeeeeC--------CcchHHHHHHHHHHH
Q 014606 88 VLFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSNVRSFHLSG--------MGCSAGILSISLAKD 159 (421)
Q Consensus 88 la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~~~~~~i~~--------~~C~g~~~al~~A~~ 159 (421)
-...|+++||+++|++++|||.+-+.- .+....-...+.||+.+ ..++.++ .|++|....+.++.+
T Consensus 298 ~~~~A~~~al~~Agi~~~did~~ei~D----~f~~~~l~~~e~lg~~~--~~vN~~GG~la~GHp~gasG~~~~~~~~~~ 371 (399)
T PRK09052 298 GPIEAIPAALKQAGLKQDDLDWIELNE----AFAAQSLAVIRDLGLDP--SKVNPLGGAIALGHPLGATGAIRTATVVHG 371 (399)
T ss_pred hHHHHHHHHHHHcCCCHHHcCEEEeCc----HHHHHHHHHHHHhCCCC--cccCCCCchhhcCchHHHHHHHHHHHHHHH
Confidence 347899999999999999999885321 12233345567788752 2233332 144555555555555
Q ss_pred HHHc
Q 014606 160 LLRV 163 (421)
Q Consensus 160 li~~ 163 (421)
|-..
T Consensus 372 L~~~ 375 (399)
T PRK09052 372 LRRT 375 (399)
T ss_pred HHhc
Confidence 5443
No 173
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=81.08 E-value=3 Score=42.57 Aligned_cols=44 Identities=14% Similarity=0.277 Sum_probs=34.9
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEE-eccCCCCCCcHHHHHHHHcC
Q 014606 89 LFSIVQDLFSKHKINPKSIDILIT-NCSVSCPTPSVAAMVINKFG 132 (421)
Q Consensus 89 a~~Aa~~aL~~ag~~~~~Id~li~-~ss~~~~~p~~a~~l~~~LG 132 (421)
+.+|.+.||+++|++++|||+|-. .|++..-...-...|...+|
T Consensus 278 a~~am~~AL~~Agl~~~~idYinaHgTsT~~nD~~E~~ai~~vfg 322 (412)
T COG0304 278 AIRAMRAALADAGLTPEDIDYINAHGTSTPANDKAESLAIKRVFG 322 (412)
T ss_pred HHHHHHHHHHHcCCCHhHCCEEeCCCccCCCccHHHHHHHHHHhc
Confidence 569999999999999999999985 46555555566667777777
No 174
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....
Probab=80.93 E-value=4.3 Score=34.08 Aligned_cols=70 Identities=20% Similarity=0.353 Sum_probs=44.5
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCCceeeeeeC--------CcchHHHHHHHHHHHH
Q 014606 89 LFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSNVRSFHLSG--------MGCSAGILSISLAKDL 160 (421)
Q Consensus 89 a~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~~~~~~i~~--------~~C~g~~~al~~A~~l 160 (421)
.+.|++++|+++|++++|||.+=+.- .+....-...+.||+.+ ..+++++ .||+|....+++++++
T Consensus 24 p~~A~~~al~~ag~~~~did~~Ei~E----aFA~~~l~~~~~lg~~~--~~vN~~GG~la~GHP~gasG~r~~~~l~~~L 97 (123)
T PF02803_consen 24 PVPAARKALERAGLTPDDIDVIEINE----AFAAQVLAFLEALGLDP--EKVNPNGGALALGHPLGASGARLVVELAHQL 97 (123)
T ss_dssp HHHHHHHHHHHHT--GGGESEEEE------SBHHHHHHHHHHHTTGG--GGBSTT--HHHH-BHTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCccccchhhccc----hhhhHHHHhhccccccc--cccCcccccccccccccccccchhhhhHHHH
Confidence 46899999999999999999876542 23344556677788762 3444443 2566666667777777
Q ss_pred HHcc
Q 014606 161 LRVQ 164 (421)
Q Consensus 161 i~~g 164 (421)
-+.+
T Consensus 98 ~~~~ 101 (123)
T PF02803_consen 98 RRRG 101 (123)
T ss_dssp HHHT
T ss_pred HHhc
Confidence 6544
No 175
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=80.12 E-value=3.9 Score=41.66 Aligned_cols=70 Identities=20% Similarity=0.294 Sum_probs=43.5
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCCceeeeeeCC--------cchHHHHHHHHHHHH
Q 014606 89 LFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSNVRSFHLSGM--------GCSAGILSISLAKDL 160 (421)
Q Consensus 89 a~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~--------~C~g~~~al~~A~~l 160 (421)
...|++++|+++|++++|||.+-+.- ..+...-...+.||+.++...+..++. |++|....++++.+|
T Consensus 298 ~~~a~~~al~~Agl~~~DID~~ei~D----~f~~~~l~~~e~lG~~~~~~pvN~~GG~la~GHp~gasG~~~~~e~~~qL 373 (400)
T TIGR02430 298 PVPATQKLLARAGLSIDQFDVIELNE----AFAAQALAVLRELGLADDDARVNPNGGAIALGHPLGASGARLVLTALRQL 373 (400)
T ss_pred HHHHHHHHHHHhCCCHHHCCCcccCc----HHHHHHHHHHHHcCCCCCCCeECCCCchHhccChHHHHHHHHHHHHHHHH
Confidence 36899999999999999999875221 223344556778998543345555541 223334444555555
Q ss_pred HH
Q 014606 161 LR 162 (421)
Q Consensus 161 i~ 162 (421)
-.
T Consensus 374 r~ 375 (400)
T TIGR02430 374 ER 375 (400)
T ss_pred Hh
Confidence 43
No 176
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....
Probab=79.91 E-value=2.1 Score=39.97 Aligned_cols=84 Identities=11% Similarity=0.094 Sum_probs=50.9
Q ss_pred HHHHhhhhhcCCCCCCCCCCCCCccccccEEEec----CCCHHHHHHHHHHCCCChhhhHHHHHHHhccCCCccchHHHH
Q 014606 283 YAVSVTWKKIWPPGRKRGPYIPDFRKAFEHFCVH----AGGKAVIDAIKENLKLKDRDVEASKTTLYRFGNTSSSSVWYE 358 (421)
Q Consensus 283 ~~~~~i~~~l~~~gl~~~~~~~~~~~did~~i~H----q~~~~~~~~i~~~lgl~~~~~~~s~~~l~~~Gn~~sasi~i~ 358 (421)
-+.++..++|.+.|++ ++||+|+|+- .....+--.+.++||++++-- +.- .+-+|++.-.-.
T Consensus 103 L~~~Aa~~AL~~~g~~--------~~dIthlv~vs~TG~~~PglD~~l~~~LgL~~~v~---R~~---i~~~GC~gg~~~ 168 (226)
T PF00195_consen 103 LAEEAARKALAEAGLD--------PSDITHLVTVSCTGIAAPGLDARLINRLGLRPDVQ---RTP---IFGMGCAGGAAG 168 (226)
T ss_dssp HHHHHHHHHHHHHTS---------GGGECEEEEEESSSSECS-HHHHHHHHHT--TTSE---EEE---EES-GGGHHHHH
T ss_pred HHHHHHHHHHHHcCCC--------CcccceEEEEecCCcCCCchhHHHHhcCCCCCCcE---EEE---EeccchhhHHHH
Confidence 3445556778888988 4999999972 345667778999999987522 111 466666666666
Q ss_pred HHHHHHcCCCCCCCeEEEEeec
Q 014606 359 LSYLEAKGKVKKGDKIWQLAFG 380 (421)
Q Consensus 359 L~~~~~~g~~~~Gd~vll~~~G 380 (421)
|..+.+=-+-.||.+||+++.-
T Consensus 169 L~~A~~~~~~~p~a~VLvv~vE 190 (226)
T PF00195_consen 169 LRRAKDIARANPGARVLVVCVE 190 (226)
T ss_dssp HHHHHHHHHHSTT-EEEEEEEE
T ss_pred HHHHHHHHhCCccceEEEEEEE
Confidence 6544331122589999998765
No 177
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=79.74 E-value=6.2 Score=38.40 Aligned_cols=88 Identities=16% Similarity=0.256 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCC-ce------eeeeeCCcchHHHHHH
Q 014606 82 MEELKTVLFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSN-VR------SFHLSGMGCSAGILSI 154 (421)
Q Consensus 82 ~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~-~~------~~~i~~~~C~g~~~al 154 (421)
.+.+.+...++++++|+++|++ ++||.++...... +..-..+.++|++++. .. .-++.+.+|++...+|
T Consensus 218 ~~~~~~~~~~~~~~~l~~~~~~-~~i~~~~~h~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~Gn~~sa~~~~~L 293 (324)
T cd00827 218 FEAAHKLIAKVVRKALDRAGLS-EDIDYFVPHQPNG---KKILEAVAKKLGGPPEKASQTRWILLRRVGNMYAASILLGL 293 (324)
T ss_pred HHHHhHHHHHHHHHHHHHcccc-cccceeeccCchH---HHHHHHHHHHccchHhhhccchhhHHHHhCchHHHHHHHHH
Confidence 3456678899999999999999 9999887654111 1456788899997421 11 1223333444444444
Q ss_pred HHHHHHHHcc---CCCeEEEEEecc
Q 014606 155 SLAKDLLRVQ---KNSLALVLSMES 176 (421)
Q Consensus 155 ~~A~~li~~g---~~~~vLvv~~e~ 176 (421)
.. +++.+ +.+++|+++.-.
T Consensus 294 ~~---~~~~~~~~~Gd~vl~~~~G~ 315 (324)
T cd00827 294 AS---LLESGKLKAGDRVLLFSYGS 315 (324)
T ss_pred HH---HHhcCCCCCCCEEEEEEecc
Confidence 33 34444 357888877543
No 178
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.
Probab=79.58 E-value=6.5 Score=39.69 Aligned_cols=49 Identities=4% Similarity=-0.036 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEec-cCCCCCCcHHHHHHHHcCCC
Q 014606 85 LKTVLFSIVQDLFSKHKINPKSIDILITNC-SVSCPTPSVAAMVINKFGLK 134 (421)
Q Consensus 85 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s-s~~~~~p~~a~~l~~~LGl~ 134 (421)
..+...++.++.|+++|++++|||.+++.. .+....... ..+..+++.+
T Consensus 203 y~~~~~~~~~~~l~~~g~~~~did~~i~H~p~~~~~~k~~-~~~l~~~~~~ 252 (379)
T TIGR01835 203 YLNAFENAWNDYAKRTGLSLADFAAFCFHVPFTKMGLKAL-RHILKKNYED 252 (379)
T ss_pred HHHHHHHHHHHHHHHhCCCHHHcCEEEECCCCCcHHHHHH-HHHHhhcccc
Confidence 445667888999999999999999998765 222212222 2344566654
No 179
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=78.40 E-value=8.1 Score=38.66 Aligned_cols=44 Identities=11% Similarity=0.130 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCC
Q 014606 88 VLFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKS 135 (421)
Q Consensus 88 la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~ 135 (421)
-...|++++|+++|++++|||.+=+.. .++...-...+.||+.+
T Consensus 252 ~~~~a~~~al~~Agl~~~did~~ei~d----~F~~~~l~~~e~lGl~~ 295 (375)
T cd00829 252 AARLAARRAYKMAGITPDDIDVAELYD----CFTIAELLALEDLGFCE 295 (375)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEecC----cChHHHHHHHHHcCCCC
Confidence 346899999999999999999886543 23445556667778764
No 180
>PLN03172 chalcone synthase family protein; Provisional
Probab=77.58 E-value=5 Score=40.76 Aligned_cols=83 Identities=11% Similarity=0.035 Sum_probs=51.9
Q ss_pred HHHHHhhhhhcCCCCCCCCCCCCCccccccEEEecC----CCHHHHHHHHHHCCCChhhhHHHHHHHhccCCCccchHHH
Q 014606 282 WYAVSVTWKKIWPPGRKRGPYIPDFRKAFEHFCVHA----GGKAVIDAIKENLKLKDRDVEASKTTLYRFGNTSSSSVWY 357 (421)
Q Consensus 282 ~~~~~~i~~~l~~~gl~~~~~~~~~~~did~~i~Hq----~~~~~~~~i~~~lgl~~~~~~~s~~~l~~~Gn~~sasi~i 357 (421)
+.++++..++|.++|++ ++|||++++.. ....+--.+.++||+++.-.. --..|++|++-..
T Consensus 104 ~La~~Aa~~aL~~ag~~--------~~dId~ii~~t~t~~~~P~~a~~l~~~LGl~~~~~~------~~~~~~gC~g~~~ 169 (393)
T PLN03172 104 KLGKEAAAKAIKEWGQP--------KSKITHLVFCTTSGVDMPGADYQLTKLLGLKPSVKR------FMMYQQGCFAGGT 169 (393)
T ss_pred HHHHHHHHHHHHHcCCC--------HHHCCEEEEEccCCCcCchHHHHHHHHhCCCCCceE------EeeeCCchHHHHH
Confidence 34556666788889998 49999987532 344566678999999864210 0135677888887
Q ss_pred HHHHHHHcCCCCCCCeEEEEe
Q 014606 358 ELSYLEAKGKVKKGDKIWQLA 378 (421)
Q Consensus 358 ~L~~~~~~g~~~~Gd~vll~~ 378 (421)
.|..+..-=+-.++.+||+++
T Consensus 170 aL~~A~~~~~~~~~~~vLVV~ 190 (393)
T PLN03172 170 VLRLAKDLAENNAGSRVLVVC 190 (393)
T ss_pred HHHHHHHHHHcCCCCeEEEEE
Confidence 777653311113456666544
No 181
>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A ....
Probab=76.83 E-value=0.93 Score=37.64 Aligned_cols=77 Identities=18% Similarity=0.223 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCCcHHHHHHHHcCCCC---Cceeeee----eCCcchHHHHHHHHHHH
Q 014606 88 VLFSIVQDLFSKHKINPKSIDILITN-CSVSCPTPSVAAMVINKFGLKS---NVRSFHL----SGMGCSAGILSISLAKD 159 (421)
Q Consensus 88 la~~Aa~~aL~~ag~~~~~Id~li~~-ss~~~~~p~~a~~l~~~LGl~~---~~~~~~i----~~~~C~g~~~al~~A~~ 159 (421)
-..++++++|+++|++|+|||+|... +.+....+.-+..+.+.++-.. .++...+ .+...++++..|..+..
T Consensus 26 ~~~~~i~~al~~agi~~~~I~~i~~hg~Gt~~~D~~E~~ai~~~~~~~~~~~~~~v~s~K~~~Gh~~~asG~~~l~~~~l 105 (119)
T PF02801_consen 26 ALARAIRRALADAGISPEDIDYIEAHGTGTPLGDAAEAEAIARVFGDSARQQPVPVGSVKSNIGHTEAASGLLSLAKALL 105 (119)
T ss_dssp HHHHHHHHHHHHHTS-GGGEEEEE----SSHHHHHHHHHHHHHHHGGGGGTSTSEEE-THHHH-B-GGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhccccccceeeeeeccccccchhhhhhhhhhhhcccccccccceeccccccccccccchHHHHHHHHH
Confidence 34788999999999999999988864 3222223344555565555331 1232222 12345666666666666
Q ss_pred HHHcc
Q 014606 160 LLRVQ 164 (421)
Q Consensus 160 li~~g 164 (421)
.++.+
T Consensus 106 ~l~~~ 110 (119)
T PF02801_consen 106 ALEHG 110 (119)
T ss_dssp HHHHT
T ss_pred HHhcC
Confidence 66654
No 182
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=76.65 E-value=8.7 Score=38.91 Aligned_cols=71 Identities=15% Similarity=0.278 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCCceeeeeeC--------CcchHHHHHHHHHHH
Q 014606 88 VLFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSNVRSFHLSG--------MGCSAGILSISLAKD 159 (421)
Q Consensus 88 la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~~~~~~i~~--------~~C~g~~~al~~A~~ 159 (421)
..+.|++++|+++|++++|||.+-+.= .+....-.-.+.||+..+ .++.++ .||+|....+.++.+
T Consensus 286 ~~~~A~~~al~~Agl~~~DiDv~Ei~d----aFa~~~l~~le~lgl~g~--~vN~~GG~la~GHP~GatG~~~~~~l~~q 359 (388)
T PRK06366 286 APIPATRKLLEKQNKSIDYYDLVEHNE----AFSIASIIVRDQLKIDNE--RFNVNGGAVAIGHPIGNSGSRIIVTLINA 359 (388)
T ss_pred cHHHHHHHHHHHcCCCHHHcceeeccc----hhHHHHHHHHHHhCCCCC--ccCCCCchhhhCCCcCCCHHHHHHHHHHH
Confidence 346899999999999999999876431 122334455667776532 444442 356777777777777
Q ss_pred HHHcc
Q 014606 160 LLRVQ 164 (421)
Q Consensus 160 li~~g 164 (421)
|-+.+
T Consensus 360 L~~~~ 364 (388)
T PRK06366 360 LKTRH 364 (388)
T ss_pred HHhcC
Confidence 76544
No 183
>PLN03173 chalcone synthase; Provisional
Probab=75.94 E-value=6.6 Score=39.87 Aligned_cols=83 Identities=11% Similarity=0.049 Sum_probs=51.9
Q ss_pred HHHHHhhhhhcCCCCCCCCCCCCCccccccEEEecC----CCHHHHHHHHHHCCCChhhhHHHHHHHhccCCCccchHHH
Q 014606 282 WYAVSVTWKKIWPPGRKRGPYIPDFRKAFEHFCVHA----GGKAVIDAIKENLKLKDRDVEASKTTLYRFGNTSSSSVWY 357 (421)
Q Consensus 282 ~~~~~~i~~~l~~~gl~~~~~~~~~~~did~~i~Hq----~~~~~~~~i~~~lgl~~~~~~~s~~~l~~~Gn~~sasi~i 357 (421)
+-++++..++|.++|++ ++|||+++... .....--.+.++||++..-.. --..+++|+.-..
T Consensus 104 ~La~~Aa~~AL~~ag~~--------~~dId~li~~t~t~~~~P~~a~~l~~~LGl~~~~~~------~~~~~~gC~g~~~ 169 (391)
T PLN03173 104 KLGKEAAAKAIKEWGQP--------KSKITHLVFCTTSGVDMPGADYQLTKLLGLRSSVKR------FMMYQQGCFAGGT 169 (391)
T ss_pred HHHHHHHHHHHHHcCCC--------HHHCCEEEEEccCCCcccHHHHHHHHHhCCCcccee------eehhcCccHHHHH
Confidence 33455666788889998 49999987643 234555668999999864210 0134667777777
Q ss_pred HHHHHHHcCCCCCCCeEEEEe
Q 014606 358 ELSYLEAKGKVKKGDKIWQLA 378 (421)
Q Consensus 358 ~L~~~~~~g~~~~Gd~vll~~ 378 (421)
.|..+..-=+-.++.+||+++
T Consensus 170 aL~~A~~~~~~~~~~~vLVV~ 190 (391)
T PLN03173 170 VLRLAKDLAENNKGARVLVVC 190 (391)
T ss_pred HHHHHHHHHHhCCCCeEEEEE
Confidence 777653311124567777654
No 184
>PLN03170 chalcone synthase; Provisional
Probab=75.84 E-value=7.5 Score=39.61 Aligned_cols=81 Identities=10% Similarity=0.038 Sum_probs=51.1
Q ss_pred HHHHhhhhhcCCCCCCCCCCCCCccccccEEEecC----CCHHHHHHHHHHCCCChhhhHHHHHHHhccCCCccchHHHH
Q 014606 283 YAVSVTWKKIWPPGRKRGPYIPDFRKAFEHFCVHA----GGKAVIDAIKENLKLKDRDVEASKTTLYRFGNTSSSSVWYE 358 (421)
Q Consensus 283 ~~~~~i~~~l~~~gl~~~~~~~~~~~did~~i~Hq----~~~~~~~~i~~~lgl~~~~~~~s~~~l~~~Gn~~sasi~i~ 358 (421)
-++++..++|+++|++ ++|||++|+-. .....--.+.++||+++.-.. .. -.|++|+.-...
T Consensus 109 La~~Aa~~AL~~ag~~--------~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r---~~---d~~~gC~G~~~a 174 (401)
T PLN03170 109 LGKAAAQKAIKEWGQP--------KSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVNR---LM---MYQQGCFAGGTV 174 (401)
T ss_pred HHHHHHHHHHHHcCCC--------HHHCCEEEEEccCCCCCChHHHHHHHHhCcCcccHH---HH---hhcChhHHHHHH
Confidence 4556666788889998 49999986522 244566678999999865210 01 346677777777
Q ss_pred HHHHHHcCCCCCCCeEEEE
Q 014606 359 LSYLEAKGKVKKGDKIWQL 377 (421)
Q Consensus 359 L~~~~~~g~~~~Gd~vll~ 377 (421)
|..+..-=+-.++.+||++
T Consensus 175 L~~A~~l~~~~~~~~vLVV 193 (401)
T PLN03170 175 LRVAKDLAENNRGARVLVV 193 (401)
T ss_pred HHHHHHHHHcCCCCeEEEE
Confidence 7655331011345677765
No 185
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=75.64 E-value=9.4 Score=38.58 Aligned_cols=42 Identities=14% Similarity=0.226 Sum_probs=29.3
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCC
Q 014606 89 LFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLK 134 (421)
Q Consensus 89 a~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~ 134 (421)
...|++++|+++|++++|||.+-..- ..+...-...+.||+.
T Consensus 260 ~~~a~~~al~~aGi~~~did~~e~~d----~ft~~~~~~~e~lgl~ 301 (389)
T PRK06064 260 AVVAAEKAYKMAGIEPKDIDVAEVHD----CFTIAEILAYEDLGFA 301 (389)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecC----CCcHHHHHHHHHcCCC
Confidence 45799999999999999999876532 1112334456677764
No 186
>PLN03169 chalcone synthase family protein; Provisional
Probab=74.93 E-value=13 Score=37.79 Aligned_cols=84 Identities=11% Similarity=0.151 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCCcee------eeeeCCcchHHHHHHHHHH
Q 014606 85 LKTVLFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSNVRS------FHLSGMGCSAGILSISLAK 158 (421)
Q Consensus 85 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~~~~------~~i~~~~C~g~~~al~~A~ 158 (421)
+..-..+.++++|+++|++++|||.+.+...+ .-...-..++++||++++... -+..|+++++...+|..+
T Consensus 279 ~~~~~~~~i~~~L~~~gl~~~did~~~~v~Hq--~n~~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtsSasip~~L~~~- 355 (391)
T PLN03169 279 IEDNIEGFCKKLMKKAGLVEKDYNDLFWAVHP--GGPAILNRLEKKLKLAPEKLECSRRALMDYGNVSSNTIVYVLEYM- 355 (391)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCCcceEEecC--CCHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchHhHHHHHHHHH-
Confidence 34455567789999999999999944332211 124566788999999854322 234445556666666544
Q ss_pred HHHHcc------CCCeEEEEE
Q 014606 159 DLLRVQ------KNSLALVLS 173 (421)
Q Consensus 159 ~li~~g------~~~~vLvv~ 173 (421)
++.+ +.+++|+++
T Consensus 356 --~~~~~~~~~~~gd~~ll~a 374 (391)
T PLN03169 356 --REELKKKGEEDEEWGLILA 374 (391)
T ss_pred --HHhhcccCCCCCcEEEEEE
Confidence 3322 246666665
No 187
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=74.58 E-value=12 Score=37.98 Aligned_cols=69 Identities=16% Similarity=0.157 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCCceeeeeeC--------CcchHHHHHHHHHHH
Q 014606 88 VLFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSNVRSFHLSG--------MGCSAGILSISLAKD 159 (421)
Q Consensus 88 la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~~~~~~i~~--------~~C~g~~~al~~A~~ 159 (421)
-...|++++|+++|++++|||.+=+.- .++...-...+.||+.. ..++.++ .+|+|....++++.+
T Consensus 286 ~~~~a~~~al~~agl~~~did~~ei~d----~F~~~~l~~~e~lg~~~--~pvN~~GG~la~Ghp~gatG~~~v~e~~~q 359 (387)
T PRK07850 286 GPVQATAKVLEKAGMKIGDIDLVEINE----AFASVVLSWAQVHEPDM--DKVNVNGGAIALGHPVGSTGARLITTALHE 359 (387)
T ss_pred hHHHHHHHHHHHcCCCHHHcCeeeecc----cchHHHHHHHHHcCCCC--CCcCCCCchhhcCCCcchhHHHHHHHHHHH
Confidence 347899999999999999999886632 22233334457788742 2445543 133344444555566
Q ss_pred HHH
Q 014606 160 LLR 162 (421)
Q Consensus 160 li~ 162 (421)
|-+
T Consensus 360 L~~ 362 (387)
T PRK07850 360 LER 362 (387)
T ss_pred HHh
Confidence 544
No 188
>PLN03168 chalcone synthase; Provisional
Probab=74.47 E-value=7.4 Score=39.47 Aligned_cols=82 Identities=17% Similarity=0.100 Sum_probs=51.8
Q ss_pred HHHHhhhhhcCCCCCCCCCCCCCccccccEEEecCC----CHHHHHHHHHHCCCChhhhHHHHHHHhccCCCccchHHHH
Q 014606 283 YAVSVTWKKIWPPGRKRGPYIPDFRKAFEHFCVHAG----GKAVIDAIKENLKLKDRDVEASKTTLYRFGNTSSSSVWYE 358 (421)
Q Consensus 283 ~~~~~i~~~l~~~gl~~~~~~~~~~~did~~i~Hq~----~~~~~~~i~~~lgl~~~~~~~s~~~l~~~Gn~~sasi~i~ 358 (421)
-++++..++|+++|++ ++|||++|+... ....--.+.++||+++.-. + ---.|++|+.-...
T Consensus 104 La~~Aa~~AL~~ag~~--------~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~---r---~~d~~~gC~g~~~a 169 (389)
T PLN03168 104 LAAEAAQKAIKEWGGR--------KSDITHIVFATTSGVNMPGADHALAKLLGLKPTVK---R---VMMYQTGCFGGASV 169 (389)
T ss_pred HHHHHHHHHHHHcCCC--------HHHCCEEEEECCCCCCCccHHHHHHHHhCcCCcce---e---eeeeCCccHHHHHH
Confidence 3455666788889998 499999987543 3445567899999986421 0 11356777777777
Q ss_pred HHHHHHcCCCCCCCeEEEEe
Q 014606 359 LSYLEAKGKVKKGDKIWQLA 378 (421)
Q Consensus 359 L~~~~~~g~~~~Gd~vll~~ 378 (421)
|..+..-=+-.++.+||+++
T Consensus 170 L~~A~~~i~~~~~~~VLVV~ 189 (389)
T PLN03168 170 LRVAKDLAENNKGARVLAVA 189 (389)
T ss_pred HHHHHHHHHhCCCCEEEEEE
Confidence 76553310113456666554
No 189
>COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=73.57 E-value=13 Score=34.51 Aligned_cols=58 Identities=12% Similarity=0.212 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCC-cHHHHHHHHcCCCCCceeeeeeC
Q 014606 87 TVLFSIVQDLFSKHKINPKSIDILITNCSVSCPTP-SVAAMVINKFGLKSNVRSFHLSG 144 (421)
Q Consensus 87 ~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p-~~a~~l~~~LGl~~~~~~~~i~~ 144 (421)
+.....++++|+++|++..|||.|+++..|+.+.. -.+.-+++-|.+..+.+.+.++.
T Consensus 39 e~l~~~i~~ll~~~~~~~~dld~iav~~GPGSFTGlRIG~~~AkgLA~~l~iplvgvss 97 (220)
T COG1214 39 ERLMPMIDELLKEAGLSLQDLDAIAVAKGPGSFTGLRIGVAFAKGLALALNIPLVGVSS 97 (220)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEccCCCcccchhhHHHHHHHHHHHcCCCEEEeCH
Confidence 67889999999999999999999999876643322 23333344344444567788873
No 190
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=73.12 E-value=8.5 Score=39.12 Aligned_cols=68 Identities=19% Similarity=0.344 Sum_probs=39.6
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCCceeeeeeC--------CcchHHHHHHHHHHHH
Q 014606 89 LFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSNVRSFHLSG--------MGCSAGILSISLAKDL 160 (421)
Q Consensus 89 a~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~~~~~~i~~--------~~C~g~~~al~~A~~l 160 (421)
...|++++|+++|++++|||.+=+.- ......-.-.+.||+.+ ..+.+++ .|++|....+.++.+|
T Consensus 297 ~~~a~~~al~~agl~~~Did~~ei~d----~fa~~~l~~~e~lg~~~--~~vN~~GG~~a~Ghp~gasG~~~~~~~~~qL 370 (397)
T PRK06954 297 PVGAIRKLFEKNGWRAAEVDLFEINE----AFAVVTMAAMKEHGLPH--EKVNVNGGACALGHPIGASGARILVTLIGAL 370 (397)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEehhh----HHHHHHHHHHHHhCCCc--ccCCcCCChHHhcccHHHHHHHHHHHHHHHH
Confidence 46799999999999999999884221 11111222236678652 2344442 2344445555566555
Q ss_pred HH
Q 014606 161 LR 162 (421)
Q Consensus 161 i~ 162 (421)
-.
T Consensus 371 ~~ 372 (397)
T PRK06954 371 RA 372 (397)
T ss_pred Hh
Confidence 43
No 191
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=71.92 E-value=19 Score=36.57 Aligned_cols=41 Identities=15% Similarity=0.164 Sum_probs=30.8
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCC
Q 014606 90 FSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLK 134 (421)
Q Consensus 90 ~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~ 134 (421)
..|++++|+++|++++|||.+-+.- ..+.......+.||+.
T Consensus 294 ~~a~~~al~~agl~~~dId~~e~~d----~f~~~~~~~~e~lg~~ 334 (393)
T PRK05656 294 VSATRRCLDKAGWSLAELDLIEANE----AFAAQSLAVGKELGWD 334 (393)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEecC----ccHHHHHHHHHHhCCC
Confidence 5899999999999999999887531 2334445566788874
No 192
>PRK09604 UGMP family protein; Validated
Probab=71.72 E-value=13 Score=36.92 Aligned_cols=55 Identities=7% Similarity=0.109 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCC-----cHHHHHHHHcCCCCCceeeeeeC
Q 014606 86 KTVLFSIVQDLFSKHKINPKSIDILITNCSVSCPTP-----SVAAMVINKFGLKSNVRSFHLSG 144 (421)
Q Consensus 86 ~~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p-----~~a~~l~~~LGl~~~~~~~~i~~ 144 (421)
.+......+++|+++|+++.|||.|.++..|+.... +.|..++..+++ +...+++
T Consensus 52 ~~~l~~~i~~~L~~~~~~~~did~iavt~GPG~~tglrvg~~~Ak~La~~~~i----pl~~v~h 111 (332)
T PRK09604 52 VENIVPLIEEALKEAGLTLEDIDAIAVTAGPGLVGALLVGVSFAKALALALNK----PLIGVNH 111 (332)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCcHHhHHHHHHHHHHHHHHhCC----CEEeecC
Confidence 357788899999999999999999998876654222 235555555554 3445554
No 193
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=71.13 E-value=14 Score=37.56 Aligned_cols=45 Identities=11% Similarity=0.000 Sum_probs=32.4
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCCcHHHHHHHHcCCC
Q 014606 89 LFSIVQDLFSKHKINPKSIDILITN-CSVSCPTPSVAAMVINKFGLK 134 (421)
Q Consensus 89 a~~Aa~~aL~~ag~~~~~Id~li~~-ss~~~~~p~~a~~l~~~LGl~ 134 (421)
..++.++||+++|+ ++|||+|... |.+..-...-...|.+.++.+
T Consensus 282 ~~~am~~AL~~Agl-~~~IdyI~ahgtgT~~~D~~E~~Ai~~~f~~p 327 (398)
T PRK06519 282 LEASLERLLKPAGG-LAAPTAVISGATGAHPATAEEKAALEAALAGP 327 (398)
T ss_pred HHHHHHHHHHHCCC-cccCCEEEeCCCCCCCccHHHHHHHHHHcCCC
Confidence 46899999999999 8999998753 433333444556677777743
No 194
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=70.71 E-value=12 Score=37.30 Aligned_cols=47 Identities=13% Similarity=0.167 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCCcHHHHHHHHcCC
Q 014606 87 TVLFSIVQDLFSKHKINPKSIDILITN-CSVSCPTPSVAAMVINKFGL 133 (421)
Q Consensus 87 ~la~~Aa~~aL~~ag~~~~~Id~li~~-ss~~~~~p~~a~~l~~~LGl 133 (421)
.-..+|+++||+++|++++|||.|-.. |.+..-.+.-...|.+.+|-
T Consensus 206 ~~~~~ai~~AL~~Agl~p~dIdyIeaHgtgT~~~D~~E~~Ai~~~fg~ 253 (342)
T PRK14691 206 DGAYRAMKIALRQAGITPEQVQHLNAHATSTPVGDLGEINAIKHLFGE 253 (342)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEecCCCCcCCCHHHHHHHHHHhCC
Confidence 356789999999999999999987653 44443445566777777774
No 195
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=70.61 E-value=16 Score=37.06 Aligned_cols=68 Identities=21% Similarity=0.324 Sum_probs=45.1
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCCceeeeeeC--------CcchHHHHHHHHHHHH
Q 014606 89 LFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSNVRSFHLSG--------MGCSAGILSISLAKDL 160 (421)
Q Consensus 89 a~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~~~~~~i~~--------~~C~g~~~al~~A~~l 160 (421)
...|+++||+++|++++|||.+=+.- .+....-...+.||+.++ .++.++ .||+|...-++++.+|
T Consensus 294 ~~~a~~~al~~Agl~~~dId~~e~~d----~f~~~~l~~~e~lg~~~~--~vN~~GG~la~Ghp~gatG~~~v~e~~~qL 367 (394)
T PRK06445 294 PVPASKKALEKAGLSVKDIDLWEINE----AFAVVVLYAIKELGLDPE--TVNIKGGAIAIGHPLGATGARIVGTLARQL 367 (394)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecc----cchHHHHHHHHHhCCCcc--ccCCCCCHHHcCCCccchHHHHHHHHHHHH
Confidence 46799999999999999999876532 233444556677887532 334332 2556666666777777
Q ss_pred HH
Q 014606 161 LR 162 (421)
Q Consensus 161 i~ 162 (421)
-.
T Consensus 368 ~~ 369 (394)
T PRK06445 368 QI 369 (394)
T ss_pred Hh
Confidence 53
No 196
>PLN02287 3-ketoacyl-CoA thiolase
Probab=70.36 E-value=11 Score=39.00 Aligned_cols=96 Identities=17% Similarity=0.232 Sum_probs=55.5
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCCceeeeeeC--------CcchHHHHHHHHHHHH
Q 014606 89 LFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSNVRSFHLSG--------MGCSAGILSISLAKDL 160 (421)
Q Consensus 89 a~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~~~~~~i~~--------~~C~g~~~al~~A~~l 160 (421)
...|++++|+++|++++|||.+=+.= .+....-...+.||+.+ ..+.+++ .|++|....+.++.+|
T Consensus 333 ~~~A~~~al~~Agl~~~DID~~Ei~d----aFa~~~l~~~e~lG~~~--~pvN~sGG~la~GHp~gAsG~~~v~~l~~qL 406 (452)
T PLN02287 333 PAVAIPAAVKAAGLELDDIDLFEINE----AFASQFVYCCKKLGLDP--EKVNVNGGAIALGHPLGATGARCVATLLHEM 406 (452)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecc----hHHHHHHHHHHHcCCCc--cccCCCCcHHhccCcHHHHHHHHHHHHHHHH
Confidence 46899999999999999999884320 11122233346778752 2333332 2555665666666666
Q ss_pred HHccC-CCeEEEEEeccccCCCccCCCccchhhhcccccCcEEEEEecCCc
Q 014606 161 LRVQK-NSLALVLSMESVSSNGYQGKVKYMQLANCLFRMGGAGILLSNKKE 210 (421)
Q Consensus 161 i~~g~-~~~vLvv~~e~~s~~~~~~~d~~~~~~~~lfGDGAaA~lL~~~~~ 210 (421)
-+.+. .++.|+. .+.-|--++|+||++.+.
T Consensus 407 ~~~~~~~~~gl~~--------------------~c~ggG~g~a~~ie~~~~ 437 (452)
T PLN02287 407 KRRGKDCRFGVVS--------------------MCIGTGMGAAAVFERGDS 437 (452)
T ss_pred HhcCCCCCeeEEE--------------------EccccCceeEEEEEecCc
Confidence 55432 1333322 233455577888887653
No 197
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=70.09 E-value=10 Score=38.31 Aligned_cols=43 Identities=9% Similarity=0.016 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCC
Q 014606 88 VLFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLK 134 (421)
Q Consensus 88 la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~ 134 (421)
-...|++++|+++|++|+|||.+-+.- ..+...-...+.||+.
T Consensus 261 ~~~~a~~~a~~~agl~~~did~~e~~d----~f~~~~~~~~e~lg~~ 303 (389)
T PRK07516 261 GPRRAWQRALAQAGVTLDDLSFVETHD----CFTIAELIEYEAMGLA 303 (389)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEec----CCCHHHHHHHHHcCCC
Confidence 345799999999999999999876542 1233344556666665
No 198
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=70.08 E-value=11 Score=39.97 Aligned_cols=45 Identities=7% Similarity=0.182 Sum_probs=32.4
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEE-eccCCCCCCcHHHHHHHHcCC
Q 014606 89 LFSIVQDLFSKHKINPKSIDILIT-NCSVSCPTPSVAAMVINKFGL 133 (421)
Q Consensus 89 a~~Aa~~aL~~ag~~~~~Id~li~-~ss~~~~~p~~a~~l~~~LGl 133 (421)
.+++.++||+++|++|+|||+|-. +|.+..-.+.-...|.+.+|-
T Consensus 407 ~~~am~~AL~~AGl~p~dIdyInaHGTGT~~gD~~E~~Ai~~~Fg~ 452 (540)
T PLN02787 407 VILCIEKALAQSGVSKEDVNYINAHATSTKAGDLKEYQALMRCFGQ 452 (540)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEccCccCCCCCHHHHHHHHHHhCC
Confidence 468999999999999999998875 343333334445667777764
No 199
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=69.52 E-value=13 Score=37.55 Aligned_cols=42 Identities=17% Similarity=0.248 Sum_probs=28.7
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCC
Q 014606 89 LFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLK 134 (421)
Q Consensus 89 a~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~ 134 (421)
...|++++|+++|++|+|||.+-+.- ..+...-...+.||+.
T Consensus 288 ~~~a~~~a~~~Agi~~~did~~e~~d----~fa~~~~~~~e~lG~~ 329 (386)
T TIGR01930 288 PVPAIPKALKKAGLSISDIDLFEINE----AFAAQVLACIKELGLD 329 (386)
T ss_pred HHHHHHHHHHHcCCCHHHCCeeehcc----hhHHHHHHHHHHhCCC
Confidence 35899999999999999999884431 1122223344677763
No 200
>PRK06158 thiolase; Provisional
Probab=69.22 E-value=17 Score=36.81 Aligned_cols=42 Identities=12% Similarity=0.158 Sum_probs=29.4
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCC
Q 014606 89 LFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLK 134 (421)
Q Consensus 89 a~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~ 134 (421)
...|+++|++++|++|+|||.+=+.- .++...-...+.||+.
T Consensus 256 ~~~aa~~A~~~AGi~p~DId~~ElyD----~Fs~~~l~~~E~lG~~ 297 (384)
T PRK06158 256 AAESGPRAFAMAGLTPADIDVVELYD----AFTINTILFLEDLGFC 297 (384)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEecC----CchHHHHHHHHHcCCC
Confidence 46799999999999999999876532 1233334445666654
No 201
>PRK08256 lipid-transfer protein; Provisional
Probab=68.78 E-value=15 Score=37.10 Aligned_cols=43 Identities=16% Similarity=0.258 Sum_probs=31.2
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCC
Q 014606 89 LFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKS 135 (421)
Q Consensus 89 a~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~ 135 (421)
...|++++++++|++++|||.+-+.- .++...-...+.||+.+
T Consensus 266 ~~~a~~~a~~~ag~~~~DiD~~ei~d----~f~~~~l~~le~lg~~~ 308 (391)
T PRK08256 266 TRAAAQQVYEQAGIGPEDIDVVELHD----CFSANELLTYEALGLCP 308 (391)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEeecc----CCcHHHHHHHHHcCCCC
Confidence 45799999999999999999876542 23334455567777763
No 202
>PF07736 CM_1: Chorismate mutase type I; InterPro: IPR008243 Chorismate mutase (CM; 5.4.99.5 from EC) catalyses the reaction at the branch point of the biosynthetic pathway leading to the three aromatic amino acids, phenylalanine, tryptophan and tyrosine (chorismic acid is the last common intermediate, and CM leads to the L-phenylalanine/L-tyrosine branch). It is part of the shikimate pathway, which is present only in bacteria, fungi and plants. This entry represents a family of monofunctional (non-fused) chorismate mutases from Gram-positive bacteria (Firmicutes) and cyanobacteria. Trusted members of the family are found in operons with other enzymes of the chorismate pathways, both up- and downstream of CM (Listeria, Bacillus, Oceanobacillus) or are the sole CM in the genome where the other members of the chorismate pathways are found elsewhere in the genome (Nostoc, Thermosynechococcus). They are monofunctional, homotrimeric, nonallosteric enzymes and are not regulated by the end-product aromatic amino acids. The three types of CM are AroQ class, Prokaryotic type (e.g., IPR008239 from INTERPRO amongst others); AroQ class, Eukaryotic type (IPR008238 from INTERPRO); and AroH class. They fall into two structural folds (AroQ class and AroH class) which are completely unrelated []. The two types of the AroQ structural class (the Escherichia coli CM dimer and the yeast CM monomer) can be structurally superimposed, and the topology of the four-helix bundle forming the active site is conserved []. For additional information please see [, , , , , , ].; PDB: 2CHS_K 2CHT_L 1COM_J 1FNJ_A 1FNK_A 1DBF_C 1UI9_A 1ODE_A 1UFY_A 1XHO_C ....
Probab=68.73 E-value=14 Score=30.67 Aligned_cols=56 Identities=11% Similarity=0.304 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccCC--CCCCcHHHHHHHHc-CCCCCceeeeeeC
Q 014606 85 LKTVLFSIVQDLFSKHKINPKSIDILITNCSVS--CPTPSVAAMVINKF-GLKSNVRSFHLSG 144 (421)
Q Consensus 85 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~--~~~p~~a~~l~~~L-Gl~~~~~~~~i~~ 144 (421)
..+=..+-.++.+++.+++++||-.++|+.++| ...|.. .++++ |+. +++.+....
T Consensus 18 I~~at~eLl~~i~~~N~l~~~dIvSi~FT~T~DL~a~fPA~---a~R~~~g~~-~Vpl~c~~E 76 (118)
T PF07736_consen 18 ILEATRELLEEILERNELSPEDIVSIIFTVTPDLDAAFPAA---AARELPGWD-DVPLMCAQE 76 (118)
T ss_dssp HHHHHHHHHHHHHHHTT--GGGEEEEEEEE-TT--SS-TCH---HHHHTTTGT-TSEEEEEE-
T ss_pred HHHHHHHHHHHHHHHcCCCHHHEEEEEEEeCCCcCccChHH---HHHccCCCC-ccceeccCc
Confidence 334445556677889999999999999987775 346653 34445 886 677776663
No 203
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane
Probab=68.46 E-value=14 Score=35.84 Aligned_cols=80 Identities=8% Similarity=0.050 Sum_probs=54.0
Q ss_pred HhhhhhcCCCCCCCCCCCCCccccccEEEecC----CCHHHHHHHHHHCCCChhhhHHHHHHHhccCCCccchHHHHHHH
Q 014606 286 SVTWKKIWPPGRKRGPYIPDFRKAFEHFCVHA----GGKAVIDAIKENLKLKDRDVEASKTTLYRFGNTSSSSVWYELSY 361 (421)
Q Consensus 286 ~~i~~~l~~~gl~~~~~~~~~~~did~~i~Hq----~~~~~~~~i~~~lgl~~~~~~~s~~~l~~~Gn~~sasi~i~L~~ 361 (421)
..+.+.|.++|++| +|||.+|.+. +...+-..+.+++|+..+-.. .+.+=+|++.-.++++-
T Consensus 89 ~av~~LL~ktgv~p--------~dIdiLVvncs~f~ptPSLsamIvnr~~mr~di~~------~nLsGMGCsAgliai~l 154 (290)
T PF08392_consen 89 GAVDDLLAKTGVKP--------SDIDILVVNCSLFNPTPSLSAMIVNRYGMRSDIKS------YNLSGMGCSAGLIAIDL 154 (290)
T ss_pred HHHHHHHHHcCCCH--------HHCCEEEEECcCCCcCCcHHHHHHHHhCCCcCeee------ecccCCcchhhHHHHHH
Confidence 44567778899995 8999998753 567888999999999876431 23455556655555554
Q ss_pred HHHcCCCCCCCeEEEEee
Q 014606 362 LEAKGKVKKGDKIWQLAF 379 (421)
Q Consensus 362 ~~~~g~~~~Gd~vll~~~ 379 (421)
+.+-=+..|+..+|+++.
T Consensus 155 A~~lL~~~p~~~ALVVst 172 (290)
T PF08392_consen 155 AKDLLQAHPNSYALVVST 172 (290)
T ss_pred HHHHHHhCCCcEEEEEEE
Confidence 433224467888777663
No 204
>PLN02932 3-ketoacyl-CoA synthase
Probab=68.43 E-value=11 Score=39.30 Aligned_cols=65 Identities=11% Similarity=0.113 Sum_probs=44.8
Q ss_pred HHHhhhhhcCCCCCCCCCCCCCccccccEEEecC----CCHHHHHHHHHHCCCChhhhHHHHHHHhccCCCccchHHHHH
Q 014606 284 AVSVTWKKIWPPGRKRGPYIPDFRKAFEHFCVHA----GGKAVIDAIKENLKLKDRDVEASKTTLYRFGNTSSSSVWYEL 359 (421)
Q Consensus 284 ~~~~i~~~l~~~gl~~~~~~~~~~~did~~i~Hq----~~~~~~~~i~~~lgl~~~~~~~s~~~l~~~Gn~~sasi~i~L 359 (421)
+..++.++|.++|+++ +|||++|... +...+-..+.++||+..+-.. -+.+-+|++.-.+.|
T Consensus 152 a~~Aa~~aL~~agi~p--------~dId~lIv~tst~~~~Pslaa~V~~~lGlr~~i~~------fdL~gmGCSggl~aL 217 (478)
T PLN02932 152 IIGAVDNLFRNTGISP--------SDIGILVVNSSTFNPTPSLSSILVNKFKLRDNIKS------LNLGGMGCSAGVIAI 217 (478)
T ss_pred HHHHHHHHHHHcCCCH--------HHCCEEEEEccCCCCCCcHHHHHHHHhCCCCCceE------EEeccchhhhHHHHH
Confidence 4455667788899994 9999998743 455667778999999754221 224557777777777
Q ss_pred HHH
Q 014606 360 SYL 362 (421)
Q Consensus 360 ~~~ 362 (421)
+.+
T Consensus 218 ~lA 220 (478)
T PLN02932 218 DAA 220 (478)
T ss_pred HHH
Confidence 754
No 205
>COG0533 QRI7 Metal-dependent proteases with possible chaperone activity [Posttranslational modification, protein turnover, chaperones]
Probab=67.96 E-value=15 Score=36.34 Aligned_cols=83 Identities=13% Similarity=0.149 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCC-cHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHHcc-
Q 014606 87 TVLFSIVQDLFSKHKINPKSIDILITNCSVSCPTP-SVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLRVQ- 164 (421)
Q Consensus 87 ~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p-~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~~g- 164 (421)
+-.....+++|+++|++.+|||+|-++..|+..-. ......++.|.+.-+.+.+.|++ |-|=+.+-+ +..+
T Consensus 52 e~i~~li~~al~eA~~~~~dID~IA~T~gPGL~gaL~VG~~~Ak~LA~a~~kPli~VnH--~~gHi~a~~-----l~~~~ 124 (342)
T COG0533 52 ENIPPLIEEALAEAGVSLEDIDAIAVTAGPGLGGALLVGATAAKALALALNKPLIPVNH--LEGHIEAAR-----LETGL 124 (342)
T ss_pred HHHHHHHHHHHHHcCCCcccCCEEEEecCCCchhHHHHHHHHHHHHHHHhCCCEeecch--HHHHHHHHH-----hccCC
Confidence 45667889999999999999999988776664322 11233333333333457888884 555544433 3333
Q ss_pred C-CCeEEEEEecc
Q 014606 165 K-NSLALVLSMES 176 (421)
Q Consensus 165 ~-~~~vLvv~~e~ 176 (421)
. .--+|+|++-.
T Consensus 125 ~~p~v~LlVSGGH 137 (342)
T COG0533 125 AFPPVALLVSGGH 137 (342)
T ss_pred CCCcEEEEEecCc
Confidence 2 23455565544
No 206
>PRK05790 putative acyltransferase; Provisional
Probab=67.24 E-value=17 Score=36.75 Aligned_cols=68 Identities=18% Similarity=0.322 Sum_probs=40.7
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCCceeeeeeC--------CcchHHHHHHHHHHHH
Q 014606 89 LFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSNVRSFHLSG--------MGCSAGILSISLAKDL 160 (421)
Q Consensus 89 a~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~~~~~~i~~--------~~C~g~~~al~~A~~l 160 (421)
...|++++|+++|++++|||.+-+.- .+....-...+.||+.. ..+.+++ .|++|....++++.+|
T Consensus 293 ~~~a~~~a~~~Agi~~~did~~e~~d----~f~~~~l~~~e~lg~~~--~pvN~~GG~l~~Ghp~gatG~~~~~e~~~qL 366 (393)
T PRK05790 293 PVPAIRKALEKAGWSLADLDLIEINE----AFAAQALAVEKELGLDP--EKVNVNGGAIALGHPIGASGARILVTLLHEM 366 (393)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEeCc----HHHHHHHHHHHHhCCCh--hhcCCCcchhhhCcchhhhHHHHHHHHHHHH
Confidence 35799999999999999999886421 12223344566777641 1223332 2444555555666555
Q ss_pred HH
Q 014606 161 LR 162 (421)
Q Consensus 161 i~ 162 (421)
-.
T Consensus 367 ~~ 368 (393)
T PRK05790 367 KR 368 (393)
T ss_pred Hh
Confidence 54
No 207
>PLN02377 3-ketoacyl-CoA synthase
Probab=67.17 E-value=12 Score=39.30 Aligned_cols=65 Identities=11% Similarity=0.074 Sum_probs=42.0
Q ss_pred HHHhhhhhcCCCCCCCCCCCCCccccccEEEecC----CCHHHHHHHHHHCCCChhhhHHHHHHHhccCCCccchHHHHH
Q 014606 284 AVSVTWKKIWPPGRKRGPYIPDFRKAFEHFCVHA----GGKAVIDAIKENLKLKDRDVEASKTTLYRFGNTSSSSVWYEL 359 (421)
Q Consensus 284 ~~~~i~~~l~~~gl~~~~~~~~~~~did~~i~Hq----~~~~~~~~i~~~lgl~~~~~~~s~~~l~~~Gn~~sasi~i~L 359 (421)
+..++.++|+++|+++ +|||++++.. +...+--.+.++||+.++.. . -+.+-+|++.-.++|
T Consensus 176 ~~~A~~~aL~kaGi~p--------~dID~LVv~cS~~~~~PSlaa~V~~~LGlr~~v~-----a-fdL~gmGCsggl~aL 241 (502)
T PLN02377 176 MFGALDNLFANTNVNP--------KDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIR-----S-FNLGGMGCSAGVIAV 241 (502)
T ss_pred HHHHHHHHHHHcCCCH--------HHCCEEEEECCCCCCCCcHHHHHHHHhCCCCCCe-----E-EecccchhhHHHHHH
Confidence 3455567788899994 9999999832 34567778899999975422 1 123335555555555
Q ss_pred HHH
Q 014606 360 SYL 362 (421)
Q Consensus 360 ~~~ 362 (421)
+.+
T Consensus 242 ~lA 244 (502)
T PLN02377 242 DLA 244 (502)
T ss_pred HHH
Confidence 543
No 208
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=67.15 E-value=16 Score=37.24 Aligned_cols=42 Identities=12% Similarity=0.247 Sum_probs=29.7
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCC
Q 014606 89 LFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLK 134 (421)
Q Consensus 89 a~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~ 134 (421)
...|+++||+++|++++|||.+-+.- .++...-...+.||+.
T Consensus 300 ~~~a~~~al~~Agl~~~Did~~ei~d----~f~~~~l~~~e~lg~~ 341 (404)
T PRK06205 300 PVPATEKALARAGLTLDDIDLIELNE----AFAAQVLAVLKEWGFG 341 (404)
T ss_pred HHHHHHHHHHHcCCCHHHCCEeeecc----HHHHHHHHHHHHhCcC
Confidence 46899999999999999999876431 1223334455677765
No 209
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=66.70 E-value=22 Score=35.99 Aligned_cols=74 Identities=15% Similarity=0.105 Sum_probs=43.3
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCCcHHHHHHHHcCCCCCceeee----eeCCcchHHHHHHHHHHHHHHc
Q 014606 89 LFSIVQDLFSKHKINPKSIDILITN-CSVSCPTPSVAAMVINKFGLKSNVRSFH----LSGMGCSAGILSISLAKDLLRV 163 (421)
Q Consensus 89 a~~Aa~~aL~~ag~~~~~Id~li~~-ss~~~~~p~~a~~l~~~LGl~~~~~~~~----i~~~~C~g~~~al~~A~~li~~ 163 (421)
..++++++|+++|++++|||.+... +.+..-.+.-...|.+.+|-+ .+... +.+..+++++..+..+...++.
T Consensus 262 ~~~a~~~Al~~Agl~~~dId~v~~hgtgt~~~D~~E~~al~~~f~~~--~pv~s~K~~~Gh~~~AaG~~~l~~~~~~l~~ 339 (392)
T PRK09185 262 AILAMQQALADAGLAPADIGYINLHGTATPLNDAMESRAVAAVFGDG--VPCSSTKGLTGHTLGAAGAVEAAICWLALRH 339 (392)
T ss_pred HHHHHHHHHHHcCCCHHHccEEEeCCCCCcCCCHHHHHHHHHHhCCC--CceeCCCcccccChhhcchHHHHHHHHHHhc
Confidence 3589999999999999999998754 433322344455666666632 22111 1223344444455444445555
Q ss_pred c
Q 014606 164 Q 164 (421)
Q Consensus 164 g 164 (421)
+
T Consensus 340 ~ 340 (392)
T PRK09185 340 G 340 (392)
T ss_pred C
Confidence 5
No 210
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=66.62 E-value=11 Score=38.32 Aligned_cols=45 Identities=18% Similarity=0.229 Sum_probs=31.9
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCCcHHHHHHHHcCC
Q 014606 89 LFSIVQDLFSKHKINPKSIDILITN-CSVSCPTPSVAAMVINKFGL 133 (421)
Q Consensus 89 a~~Aa~~aL~~ag~~~~~Id~li~~-ss~~~~~p~~a~~l~~~LGl 133 (421)
..+|+++||+++|++++|||++-.. +.+....+.-...+...+|.
T Consensus 278 ~~~a~~~Al~~agi~~~dId~v~~hgtgt~~~d~~E~~al~~~~~~ 323 (411)
T PRK07314 278 AARAMKLALKDAGINPEDIDYINAHGTSTPAGDKAETQAIKRVFGE 323 (411)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEccccCCccccHHHHHHHHHHhcc
Confidence 4579999999999999999998753 43333344445566666663
No 211
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=66.14 E-value=11 Score=38.17 Aligned_cols=45 Identities=16% Similarity=0.225 Sum_probs=32.7
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCCcHHHHHHHHcCC
Q 014606 89 LFSIVQDLFSKHKINPKSIDILITN-CSVSCPTPSVAAMVINKFGL 133 (421)
Q Consensus 89 a~~Aa~~aL~~ag~~~~~Id~li~~-ss~~~~~p~~a~~l~~~LGl 133 (421)
..+++++||+++|++++|||.+... +.+....+.....+...+|-
T Consensus 277 ~~~ai~~Al~~Agi~~~dId~ve~h~tgt~~~D~~E~~a~~~~~~~ 322 (407)
T TIGR03150 277 AARAMRAALKDAGINPEDVDYINAHGTSTPLGDKAETKAIKRVFGD 322 (407)
T ss_pred HHHHHHHHHHHcCCCHhHCCEEeCcCCCCCCCCHHHHHHHHHHhcc
Confidence 5689999999999999999988753 43333344555666677664
No 212
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=65.98 E-value=11 Score=38.03 Aligned_cols=77 Identities=14% Similarity=0.122 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCCcHHHHHHHHcCCC-CCceeee----eeCCcchHHHHHHHHHHHHH
Q 014606 88 VLFSIVQDLFSKHKINPKSIDILITN-CSVSCPTPSVAAMVINKFGLK-SNVRSFH----LSGMGCSAGILSISLAKDLL 161 (421)
Q Consensus 88 la~~Aa~~aL~~ag~~~~~Id~li~~-ss~~~~~p~~a~~l~~~LGl~-~~~~~~~----i~~~~C~g~~~al~~A~~li 161 (421)
-..++++++|+++|++++|||.+... +.+....+..+..+...++-. ..++... +.+..+++++..|..+...+
T Consensus 276 ~~~~~i~~al~~agi~~~dId~v~~h~tgt~~~d~~E~~al~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l 355 (406)
T cd00834 276 GAARAMRAALADAGLSPEDIDYINAHGTSTPLNDAAESKAIKRVFGEHAKKVPVSSTKSMTGHLLGAAGAVEAIATLLAL 355 (406)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEecccccCccccHHHHHHHHHHhcccCCCCceeCcchhhccchhhhhHHHHHHHHHHH
Confidence 45678999999999999999988864 433333444455566666542 1122211 12234566666776667677
Q ss_pred Hcc
Q 014606 162 RVQ 164 (421)
Q Consensus 162 ~~g 164 (421)
+.+
T Consensus 356 ~~~ 358 (406)
T cd00834 356 RDG 358 (406)
T ss_pred hcC
Confidence 766
No 213
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=65.02 E-value=8.8 Score=38.96 Aligned_cols=69 Identities=16% Similarity=-0.008 Sum_probs=48.7
Q ss_pred hhhhhcCCCCCCCCCCCCCccccccEEEecCCCHHHHHHHHHHCCCCh------------------hhhHHHHHHHhccC
Q 014606 287 VTWKKIWPPGRKRGPYIPDFRKAFEHFCVHAGGKAVIDAIKENLKLKD------------------RDVEASKTTLYRFG 348 (421)
Q Consensus 287 ~i~~~l~~~gl~~~~~~~~~~~did~~i~Hq~~~~~~~~i~~~lgl~~------------------~~~~~s~~~l~~~G 348 (421)
.+.++++++|++ ++|||.+=+|-.-...--...+.||+.+ .++..+ --.-.+|
T Consensus 274 A~~~al~~Agi~--------~~DID~~Ei~d~Fa~~~l~~~e~lgl~~~g~~~~~~~~g~~~~~G~~pvN~~-GG~la~G 344 (393)
T cd00826 274 AARKALEKAGLG--------IGDLDLIEAHDAFAANACATNEALGLCPEGQGGALVDRGDNTYGGKSIINPN-GGAIAIG 344 (393)
T ss_pred HHHHHHHHcCCC--------HHHcCeeehhhhhHHHHHHHHHHhCCCcccchhhhhhcCccccCCcceECCC-CchhhcC
Confidence 344667788998 4999999999998777777889999875 233210 1122389
Q ss_pred CCccchHHHHHHHHHH
Q 014606 349 NTSSSSVWYELSYLEA 364 (421)
Q Consensus 349 n~~sasi~i~L~~~~~ 364 (421)
|...|+=...+.++..
T Consensus 345 hP~gAtG~~~~~e~~~ 360 (393)
T cd00826 345 HPIGASGAAICAELCF 360 (393)
T ss_pred CCccccHHHHHHHHHH
Confidence 9988877777666544
No 214
>PLN02192 3-ketoacyl-CoA synthase
Probab=64.90 E-value=16 Score=38.33 Aligned_cols=79 Identities=11% Similarity=0.114 Sum_probs=49.2
Q ss_pred HhhhhhcCCCCCCCCCCCCCccccccEEEecC----CCHHHHHHHHHHCCCChhhhHHHHHHHhccCCCccchHHHHHHH
Q 014606 286 SVTWKKIWPPGRKRGPYIPDFRKAFEHFCVHA----GGKAVIDAIKENLKLKDRDVEASKTTLYRFGNTSSSSVWYELSY 361 (421)
Q Consensus 286 ~~i~~~l~~~gl~~~~~~~~~~~did~~i~Hq----~~~~~~~~i~~~lgl~~~~~~~s~~~l~~~Gn~~sasi~i~L~~ 361 (421)
.++.++|+++|+++ +|||.+|... +...+-..+.+++|+..+-. . -+.+-++++.-.++|+.
T Consensus 182 ~Aa~~aL~kaGi~p--------~DIDiLIv~~S~~~~~PSlaa~I~n~lGlr~~i~-----a-fdLsgmGCSggl~aLdl 247 (511)
T PLN02192 182 GAIDQLLAKTSVKP--------KDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIL-----S-YNLGGMGCSAGLISIDL 247 (511)
T ss_pred HHHHHHHHHcCCCH--------HHCCEEEEECCCCCCCchHHHHHHHHhCCCCCce-----E-EEcccchhhhHHHHHHH
Confidence 44557788899994 9999998743 34567777899999874321 1 12455666666666665
Q ss_pred HHHcCCCCCCCeEEEEe
Q 014606 362 LEAKGKVKKGDKIWQLA 378 (421)
Q Consensus 362 ~~~~g~~~~Gd~vll~~ 378 (421)
+..-=+..++.++|+++
T Consensus 248 A~~lL~a~~~~~aLVVs 264 (511)
T PLN02192 248 AKHLLQVHPNSYALVIS 264 (511)
T ss_pred HHHHHHcCCCCeEEEEE
Confidence 43211223566666555
No 215
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=64.69 E-value=26 Score=35.54 Aligned_cols=53 Identities=17% Similarity=0.261 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCCceeeeeeCCcc
Q 014606 88 VLFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSNVRSFHLSGMGC 147 (421)
Q Consensus 88 la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C 147 (421)
....|++++|+++|++++|||.+=+.- .++...-...+.||+.+ ..++.++ |.
T Consensus 289 ~~~~a~~~a~~~agl~~~Did~~Ei~d----~Fa~~~l~~~e~lG~~~--~pvN~~G-G~ 341 (390)
T PRK06504 289 APLPATERALKKAGMKIDDIDLYEVNE----AFASVPLAWLKATGADP--ERLNVNG-GA 341 (390)
T ss_pred cHHHHHHHHHHHcCCCHHHCCEEEecc----cchHHHHHHHHHhCCCC--CCcCCCC-cH
Confidence 456799999999999999999885432 23344456678889874 2455553 44
No 216
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=64.57 E-value=17 Score=36.69 Aligned_cols=42 Identities=14% Similarity=0.261 Sum_probs=29.5
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCC
Q 014606 89 LFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLK 134 (421)
Q Consensus 89 a~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~ 134 (421)
...|++++++++|++|+|||.+-..- ..........+.||+.
T Consensus 287 ~~~a~~~a~~~Agi~~~did~~e~~d----~f~~~~~~~~e~lg~~ 328 (386)
T cd00751 287 PVPAIPKALKRAGLTLDDIDLIEINE----AFAAQALACLKELGLD 328 (386)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEeec----hhHHHHHHHHHHhCCC
Confidence 46899999999999999999876431 1122334445777765
No 217
>PRK09051 beta-ketothiolase; Provisional
Probab=64.44 E-value=19 Score=36.56 Aligned_cols=50 Identities=16% Similarity=0.269 Sum_probs=35.2
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCCceeeeeeC
Q 014606 89 LFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSNVRSFHLSG 144 (421)
Q Consensus 89 a~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~~~~~~i~~ 144 (421)
...|++++|+++|++++|||++=+.- .+....-...+.||+.+ ..+..++
T Consensus 294 ~~~a~~~al~~agi~~~did~~ei~d----~f~~~~~~~~e~lg~~~--~~vN~~G 343 (394)
T PRK09051 294 PVPATQKALERAGLTVADLDVIEANE----AFAAQACAVTRELGLDP--AKVNPNG 343 (394)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecC----ccHHHHHHHHHHhCCCc--cccCCCc
Confidence 46899999999999999999876531 23344555678888852 3455553
No 218
>TIGR01796 CM_mono_aroH monofunctional chorismate mutase, gram positive type, clade 1. This model represents a family of monofunctional (non-fused) chorismate mutases from gram positive bacteria (Firmicutes) and cyanobacteria. Trusted members of the family are found in operons with other enzymes of the chorismate pathways, both up- and downstream of CM (Listeria, Bacillus, Oceanobacillus) or are the sole CM in the genome where the other members of the chorismate pathways are found elsewhere in the genome (Nostoc, Thermosynechococcus).
Probab=63.67 E-value=21 Score=29.56 Aligned_cols=53 Identities=11% Similarity=0.280 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEeccCCC--CCCcHHHHHHHHc-CCCCCceeeeeeC
Q 014606 88 VLFSIVQDLFSKHKINPKSIDILITNCSVSC--PTPSVAAMVINKF-GLKSNVRSFHLSG 144 (421)
Q Consensus 88 la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~--~~p~~a~~l~~~L-Gl~~~~~~~~i~~ 144 (421)
=..+-..+.+++.+++++||-.++|+.++|- .+|. ..++++ |+. +++.++...
T Consensus 21 at~eLl~~ii~~N~l~~edivSv~FT~T~DL~a~FPA---~aaR~~~Gw~-~Vplmc~qE 76 (117)
T TIGR01796 21 AVAELLTELMERNELTPEDLISVIFTVTEDLHADFPA---AAARGLPGWT-DVPVMCAQE 76 (117)
T ss_pred HHHHHHHHHHHHcCCCHHHEEEEEEEecCcccccChH---HHHHhccCCC-CcceeccCc
Confidence 3344556777889999999999999877753 4553 455566 887 677766664
No 219
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=63.28 E-value=14 Score=37.30 Aligned_cols=46 Identities=9% Similarity=0.180 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCCcHHHHHHHHcC
Q 014606 87 TVLFSIVQDLFSKHKINPKSIDILITN-CSVSCPTPSVAAMVINKFG 132 (421)
Q Consensus 87 ~la~~Aa~~aL~~ag~~~~~Id~li~~-ss~~~~~p~~a~~l~~~LG 132 (421)
+-..+++++||+++|++++|||.|... +.+....+.....+...+|
T Consensus 274 ~~~~~a~~~Al~~Agi~~~dId~i~~hgtgt~~~D~~E~~ai~~~~~ 320 (407)
T cd00828 274 KGIARAIRTALAKAGLSLDDLDVISAHGTSTPANDVAESRAIAEVAG 320 (407)
T ss_pred HHHHHHHHHHHHHcCCCHHHcCEEecccccCccccHHHHHHHHHHHh
Confidence 356789999999999999999988753 4333333444455555554
No 220
>TIGR03723 bact_gcp putative glycoprotease GCP. This model represents bacterial members of a protein family that is widely distributed. In a few pathogenic species, the protein is exported in a way that may represent an exceptional secondary function. This model plus companion (archaeal) model TIGR03722 together span the prokaryotic member sequences of TIGR00329, a protein family that appears universal in life, and whose broad function is unknown. A member of TIGR03722 has been characterized as a DNA-binding protein with apurinic endopeptidase activity. In contrast, the rare characterized members of the present family show O-sialoglycoprotein endopeptidase (EC. 3.4.24.57) activity after export. These include glycoprotease (gcp) from Pasteurella haemolytica A1 and a cohemolysin from Riemerella anatipestifer (GB|AAG39646.1). The member from Staphylococcus aureus is essential and is related to cell wall dynamics and the modulation of autolysis, but members are also found in the Mycoplasmas
Probab=62.98 E-value=22 Score=34.86 Aligned_cols=55 Identities=7% Similarity=0.094 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCC-----cHHHHHHHHcCCCCCceeeeeeC
Q 014606 86 KTVLFSIVQDLFSKHKINPKSIDILITNCSVSCPTP-----SVAAMVINKFGLKSNVRSFHLSG 144 (421)
Q Consensus 86 ~~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p-----~~a~~l~~~LGl~~~~~~~~i~~ 144 (421)
.+.....++++|++++++.+|||.|.++..|+.... +.|.-++..++ ++.+.+++
T Consensus 50 ~~~l~~~i~~~l~~~~~~~~~id~iav~~GPGsftglrig~~~Ak~la~~~~----~p~~~v~h 109 (314)
T TIGR03723 50 LEAIPPLIEEALAEAGLTLSDIDAIAVTAGPGLIGALLVGVSFAKALALALN----KPLIGVNH 109 (314)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecCCChHHhHHHHHHHHHHHHHHhC----CCEEeccc
Confidence 356778889999999999999999999877764222 23444555554 45666664
No 221
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=62.56 E-value=36 Score=34.55 Aligned_cols=42 Identities=14% Similarity=0.199 Sum_probs=30.7
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCC
Q 014606 89 LFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLK 134 (421)
Q Consensus 89 a~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~ 134 (421)
...|+++|++++|++++|||.+-+.- .+....-...+.||+.
T Consensus 278 ~~~aa~~a~~~Agi~~~Didv~el~D----~fa~~~l~~le~lGl~ 319 (403)
T PRK06289 278 VRQAVLDAYRRAGVGLDDLDGFEVHD----CFTPSEYLAIDHIGLT 319 (403)
T ss_pred HHHHHHHHHHHcCCCHHHCeEEeeec----cchHHHHHHHHHcCCC
Confidence 46799999999999999999876542 2233444556777765
No 222
>PLN03171 chalcone synthase-like protein; Provisional
Probab=62.35 E-value=17 Score=37.04 Aligned_cols=67 Identities=18% Similarity=-0.002 Sum_probs=43.1
Q ss_pred HHHHhhhhhcCCCCCCCCCCCCCccccccEEEecC----CCHHHHHHHHHHCCCChhhhHHHHHHHhccCCCccchHHHH
Q 014606 283 YAVSVTWKKIWPPGRKRGPYIPDFRKAFEHFCVHA----GGKAVIDAIKENLKLKDRDVEASKTTLYRFGNTSSSSVWYE 358 (421)
Q Consensus 283 ~~~~~i~~~l~~~gl~~~~~~~~~~~did~~i~Hq----~~~~~~~~i~~~lgl~~~~~~~s~~~l~~~Gn~~sasi~i~ 358 (421)
-++++..++|+++|++ ++|||++++.. .....--.+.++||++..... ....++ +|+.-+..
T Consensus 111 la~~Aa~~aL~~ag~~--------~~dId~li~~t~t~~~~P~~a~~v~~~LGl~~~~~~-----~~~~~~-gC~g~~~a 176 (399)
T PLN03171 111 LAAEAAKKAIAEWGRP--------AADITHLVVTTNSGAHIPGVDFRLVPLLGLRPSVRR-----TMLHLN-GCFAGAAA 176 (399)
T ss_pred HHHHHHHHHHHHcCCC--------HHHCCEEEEEcCCCCCCCchHHHHHHHhCCCcccce-----eeccCC-ccHHHHHH
Confidence 3455666778889998 49999998722 123444568889999864210 112333 78888877
Q ss_pred HHHHH
Q 014606 359 LSYLE 363 (421)
Q Consensus 359 L~~~~ 363 (421)
|..+.
T Consensus 177 L~~A~ 181 (399)
T PLN03171 177 LRLAK 181 (399)
T ss_pred HHHHH
Confidence 77653
No 223
>TIGR00329 gcp_kae1 metallohydrolase, glycoprotease/Kae1 family. This subfamily includes the well-studied secreted O-sialoglycoprotein endopeptidase (glycoprotease, EC 3.4.24.57) of Pasteurella haemolytica, a pathogen. A member from Riemerella anatipestifer, associated with cohemolysin activity, likewise is exported without benefit of a classical signal peptide and shows glycoprotease activity on the test substrate glycophorin. However, archaeal members of this subfamily show unrelated activities as demonstrated in Pyrococcus abyssi: DNA binding, iron binding, apurinic endonuclease activity, genomic association with a kinase domain, and no glycoprotease activity. This family thus pulls together a set of proteins as a homology group that appears to be near-universal in life, yet heterogeneous in assayed function between bacteria and archaea.
Probab=61.76 E-value=26 Score=34.14 Aligned_cols=55 Identities=5% Similarity=0.071 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCC-----cHHHHHHHHcCCCCCceeeeeeC
Q 014606 86 KTVLFSIVQDLFSKHKINPKSIDILITNCSVSCPTP-----SVAAMVINKFGLKSNVRSFHLSG 144 (421)
Q Consensus 86 ~~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p-----~~a~~l~~~LGl~~~~~~~~i~~ 144 (421)
.+......+++|+++|++++|||.|.++..|+.... +.|..++..+++ +...+++
T Consensus 49 ~~~l~~~i~~~l~~~~~~~~did~iav~~GPG~~tglrvg~~~Ak~la~~~~~----p~~~v~h 108 (305)
T TIGR00329 49 AENIPPLLERALIESNVDKSEIDLIAYTQGPGLGGSLRVGATFARSLALSLDK----PLIGVNH 108 (305)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCchhhHHHHHHHHHHHHHHhCC----CEeeccc
Confidence 356677889999999999999999999887764322 124444455544 4555554
No 224
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=61.40 E-value=16 Score=36.94 Aligned_cols=46 Identities=13% Similarity=0.268 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCCcHHHHHHHHcC
Q 014606 87 TVLFSIVQDLFSKHKINPKSIDILITN-CSVSCPTPSVAAMVINKFG 132 (421)
Q Consensus 87 ~la~~Aa~~aL~~ag~~~~~Id~li~~-ss~~~~~p~~a~~l~~~LG 132 (421)
....+|+++||+++|++|+|||++-.. |.+....+.-...|.+.+|
T Consensus 254 ~~~~~ai~~Al~~agi~p~dId~i~~hgtgt~~~D~~E~~al~~~fg 300 (381)
T PRK05952 254 KSAIAAIQQCLARSGLTPEDIDYIHAHGTATRLNDQREANLIQALFP 300 (381)
T ss_pred HHHHHHHHHHHHHhCCCHHHeeEEEccCCCCCCCcHHHHHHHHHHcC
Confidence 356899999999999999999998753 4333333444555666666
No 225
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=61.31 E-value=18 Score=36.75 Aligned_cols=47 Identities=17% Similarity=0.302 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCCcHHHHHHHHcCCC
Q 014606 88 VLFSIVQDLFSKHKINPKSIDILITN-CSVSCPTPSVAAMVINKFGLK 134 (421)
Q Consensus 88 la~~Aa~~aL~~ag~~~~~Id~li~~-ss~~~~~p~~a~~l~~~LGl~ 134 (421)
=..+|.+++|+++|+++++||+|... |.+....+.-...|.+-+|-.
T Consensus 271 ~~~~a~~~al~~ag~~~~~i~~v~~hgtgt~~~D~~E~~al~~~fg~~ 318 (399)
T cd00832 271 GLARAIRLALADAGLTPEDVDVVFADAAGVPELDRAEAAALAAVFGPR 318 (399)
T ss_pred HHHHHHHHHHHHcCCCHHHccEEEeccCcCCCCCHHHHHHHHHHhCCC
Confidence 45688999999999999999988754 433444455566677777753
No 226
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=61.27 E-value=37 Score=34.33 Aligned_cols=42 Identities=17% Similarity=0.208 Sum_probs=29.8
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCC
Q 014606 89 LFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLK 134 (421)
Q Consensus 89 a~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~ 134 (421)
...|++++|+++|++|+|||.+=+.- .+....-...+.||+.
T Consensus 282 ~~~a~~~al~~AGi~p~DId~~Ei~d----aFa~~~l~~~e~lg~~ 323 (385)
T TIGR02445 282 PVPATQKALKRAGLSISDIDVFELNE----AFAAQALPCLKDLGLL 323 (385)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEEcc----ccHHHHHHHHHHcCCC
Confidence 46789999999999999999775531 2233344555777763
No 227
>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A ....
Probab=60.94 E-value=4.2 Score=33.63 Aligned_cols=68 Identities=15% Similarity=0.125 Sum_probs=37.7
Q ss_pred hhhhhcCCCCCCCCCCCCCccccccEEEecCCCHHHHHHH-----HHHCCCCh--hhhHHHHHHHhccCCCccchHHHHH
Q 014606 287 VTWKKIWPPGRKRGPYIPDFRKAFEHFCVHAGGKAVIDAI-----KENLKLKD--RDVEASKTTLYRFGNTSSSSVWYEL 359 (421)
Q Consensus 287 ~i~~~l~~~gl~~~~~~~~~~~did~~i~Hq~~~~~~~~i-----~~~lgl~~--~~~~~s~~~l~~~Gn~~sasi~i~L 359 (421)
.|.++|.++|++ ++|||++..|-.+....+.. .+.++-.. ..+.- ...=..+||+.+++-.+.|
T Consensus 30 ~i~~al~~agi~--------~~~I~~i~~hg~Gt~~~D~~E~~ai~~~~~~~~~~~~~~v-~s~K~~~Gh~~~asG~~~l 100 (119)
T PF02801_consen 30 AIRRALADAGIS--------PEDIDYIEAHGTGTPLGDAAEAEAIARVFGDSARQQPVPV-GSVKSNIGHTEAASGLLSL 100 (119)
T ss_dssp HHHHHHHHHTS---------GGGEEEEE----SSHHHHHHHHHHHHHHHGGGGGTSTSEE-E-THHHH-B-GGGHHHHHH
T ss_pred HHHHHHhhhccc--------cccceeeeeeccccccchhhhhhhhhhhhcccccccccce-eccccccccccccchHHHH
Confidence 345667778888 49999999999888765553 33344221 01110 1233558999999999888
Q ss_pred HHHH
Q 014606 360 SYLE 363 (421)
Q Consensus 360 ~~~~ 363 (421)
...+
T Consensus 101 ~~~~ 104 (119)
T PF02801_consen 101 AKAL 104 (119)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8643
No 228
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=59.73 E-value=12 Score=37.24 Aligned_cols=47 Identities=15% Similarity=0.185 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEE-EeccCCCCCCcHHHHHHHHcCCC
Q 014606 88 VLFSIVQDLFSKHKINPKSIDILI-TNCSVSCPTPSVAAMVINKFGLK 134 (421)
Q Consensus 88 la~~Aa~~aL~~ag~~~~~Id~li-~~ss~~~~~p~~a~~l~~~LGl~ 134 (421)
=++.|.++||+++|++|+|||.|= ++||+..-.-.-+..|.+.++-.
T Consensus 302 Ga~~am~raL~~Agl~pe~i~YvNAHATST~~GD~aE~~Ai~~vf~~~ 349 (440)
T KOG1394|consen 302 GAVLAMERALKDAGLSPEDIDYVNAHATSTPLGDAAEAEAIKRVFGEH 349 (440)
T ss_pred hHHHHHHHHHHHcCCChhhcCeeecccccCcCchHHHHHHHHHHhccC
Confidence 467888999999999999999887 45655433334456666766644
No 229
>PRK07855 lipid-transfer protein; Provisional
Probab=59.59 E-value=44 Score=33.81 Aligned_cols=25 Identities=20% Similarity=0.389 Sum_probs=21.6
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEe
Q 014606 89 LFSIVQDLFSKHKINPKSIDILITN 113 (421)
Q Consensus 89 a~~Aa~~aL~~ag~~~~~Id~li~~ 113 (421)
...|+++|++++|++++|||.+-+.
T Consensus 268 ~~~aa~~a~~~AGi~~~DiDv~El~ 292 (386)
T PRK07855 268 MGLVARQLWAQSGLGPADIDTAILY 292 (386)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEec
Confidence 3479999999999999999987653
No 230
>KOG2707 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones]
Probab=59.07 E-value=17 Score=35.95 Aligned_cols=47 Identities=17% Similarity=0.223 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCC-----cHHHHHHHHcCCC
Q 014606 88 VLFSIVQDLFSKHKINPKSIDILITNCSVSCPTP-----SVAAMVINKFGLK 134 (421)
Q Consensus 88 la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p-----~~a~~l~~~LGl~ 134 (421)
--.+..++||+.+|+.|+|+|+|-++..|+...+ +.|..++.++..+
T Consensus 85 ni~~~iqral~aa~~~p~dldaIAVT~gPGl~lsL~vGl~fA~glA~~l~kP 136 (405)
T KOG2707|consen 85 NIPRLIQRALDAAGLSPKDLDAIAVTRGPGLPLSLKVGLSFAKGLAVKLQKP 136 (405)
T ss_pred HHHHHHHHHHHHcCCCcccceeEEEecCCCceeehhhhHHHHHHHHHhccCC
Confidence 4457789999999999999999988777776544 3466677776543
No 231
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=58.90 E-value=38 Score=34.24 Aligned_cols=70 Identities=20% Similarity=0.327 Sum_probs=42.1
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCC-ceeeeeeC--------CcchHHHHHHHHHHH
Q 014606 89 LFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSN-VRSFHLSG--------MGCSAGILSISLAKD 159 (421)
Q Consensus 89 a~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~-~~~~~i~~--------~~C~g~~~al~~A~~ 159 (421)
...|++++|+++|++++|||.+=+.- .+....-...+.||+.+. -..+.+++ .||+|......++++
T Consensus 284 ~~~a~~~al~~Agl~~~DId~~El~d----~F~~~~l~~~e~lg~~~~~~~~vN~~GG~la~GhP~GAtG~~~v~~l~~~ 359 (387)
T PRK08947 284 PVPATQKALKRAGLSISDIDVFELNE----AFAAQSLPCLKDLGLLDKMDEKVNLNGGAIALGHPLGCSGARISTTLLNL 359 (387)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecc----cchHHHHHHHHHcCCCCCCCCCcCCCCchhhcCCCccccHHHHHHHHHHH
Confidence 46788999999999999999886432 233344455677776421 02333332 255555555555555
Q ss_pred HHH
Q 014606 160 LLR 162 (421)
Q Consensus 160 li~ 162 (421)
|-+
T Consensus 360 L~~ 362 (387)
T PRK08947 360 MER 362 (387)
T ss_pred HHh
Confidence 543
No 232
>PLN00415 3-ketoacyl-CoA synthase
Probab=58.85 E-value=23 Score=36.66 Aligned_cols=77 Identities=14% Similarity=0.082 Sum_probs=47.1
Q ss_pred hhhhcCCCCCCCCCCCCCccccccEEEecCC----CHHHHHHHHHHCCCChhhhHHHHHHHhccCCCccchHHHHHHHHH
Q 014606 288 TWKKIWPPGRKRGPYIPDFRKAFEHFCVHAG----GKAVIDAIKENLKLKDRDVEASKTTLYRFGNTSSSSVWYELSYLE 363 (421)
Q Consensus 288 i~~~l~~~gl~~~~~~~~~~~did~~i~Hq~----~~~~~~~i~~~lgl~~~~~~~s~~~l~~~Gn~~sasi~i~L~~~~ 363 (421)
..++|+++|+++ +|||++|.... ....-..+.+++|++++.. . -..+.+|++.-.+.|..+.
T Consensus 142 ~~~aL~~aGi~p--------~dID~LIvs~T~~~~~Pslaa~l~~~LGLr~~v~-----~-~dL~gmGCsggv~aL~lA~ 207 (466)
T PLN00415 142 LNSLFKKTGIEP--------REVGIFIVNCSLFNPNPSLSSMIVNRYKLKTDVK-----T-YNLSGMGCSAGAISVDLAT 207 (466)
T ss_pred HHHHHHHcCCCH--------HHCCEEEEECcCCCCCchHHHHHHHHhCCCCCce-----E-EEeccccchHHHHHHHHHH
Confidence 345667889984 99999886543 3455566889999984322 1 2345566666666666543
Q ss_pred HcCCCCCCCeEEEEe
Q 014606 364 AKGKVKKGDKIWQLA 378 (421)
Q Consensus 364 ~~g~~~~Gd~vll~~ 378 (421)
+-=+..++.++|+++
T Consensus 208 ~ll~a~~~~~aLVVs 222 (466)
T PLN00415 208 NLLKANPNTYAVIVS 222 (466)
T ss_pred HHHHhCCCCEEEEEE
Confidence 311224566666554
No 233
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=58.58 E-value=31 Score=34.78 Aligned_cols=42 Identities=12% Similarity=0.225 Sum_probs=30.3
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCC
Q 014606 89 LFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLK 134 (421)
Q Consensus 89 a~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~ 134 (421)
...|+++||+++|++++|||.+-+.- ..+...-...+.||+.
T Consensus 259 ~~~a~~~al~~Agi~~~DiD~~ei~d----~ft~~~l~~le~lGl~ 300 (385)
T PRK12578 259 TQLAARQAYNMAKVTPNDIEVATVHD----AFTIAEIMGYEDLGFT 300 (385)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecC----cChHHHHHHHHHcCCC
Confidence 45799999999999999999875532 1223444556677765
No 234
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=57.81 E-value=32 Score=34.95 Aligned_cols=46 Identities=13% Similarity=0.304 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCCcHHHHHHHHcCC
Q 014606 88 VLFSIVQDLFSKHKINPKSIDILITN-CSVSCPTPSVAAMVINKFGL 133 (421)
Q Consensus 88 la~~Aa~~aL~~ag~~~~~Id~li~~-ss~~~~~p~~a~~l~~~LGl 133 (421)
...++++++|+++|++++|||.+... +.+..........+...+|.
T Consensus 280 ~~~~a~~~al~~Agl~~~dId~i~~h~tgt~~~d~~E~~al~~~~~~ 326 (424)
T smart00825 280 AQARLIRQALARAGVDPADVDYVEAHGTGTPLGDPIEAEALAAVFGQ 326 (424)
T ss_pred HHHHHHHHHHHHhCCCHHHccEEEeeCCCCCCCCHHHHHHHHHHHhc
Confidence 45679999999999999999998864 43222223334556666653
No 235
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=57.00 E-value=33 Score=35.01 Aligned_cols=46 Identities=13% Similarity=0.109 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHh-CCCCCCCccEEEEe-ccCCCCCCcHHHHHHHHcCC
Q 014606 88 VLFSIVQDLFSK-HKINPKSIDILITN-CSVSCPTPSVAAMVINKFGL 133 (421)
Q Consensus 88 la~~Aa~~aL~~-ag~~~~~Id~li~~-ss~~~~~p~~a~~l~~~LGl 133 (421)
-..+|+++||++ +|++++|||+|-.. +.+....+.....+.+.+|-
T Consensus 284 ~~~~ai~~Al~~~Agi~~~dId~ie~hgtgt~~~D~~E~~al~~~~~~ 331 (421)
T PTZ00050 284 GARRCMENALKDGANININDVDYVNAHATSTPIGDKIELKAIKKVFGD 331 (421)
T ss_pred HHHHHHHHHHHhccCCChhhCCEEECCCccCCCCCHHHHHHHHHHhcc
Confidence 457899999999 99999999988754 43322233334456666663
No 236
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=56.94 E-value=32 Score=35.10 Aligned_cols=46 Identities=7% Similarity=-0.026 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEE-eccCCCCCCcHHHHHHHHcCC
Q 014606 88 VLFSIVQDLFSKHKINPKSIDILIT-NCSVSCPTPSVAAMVINKFGL 133 (421)
Q Consensus 88 la~~Aa~~aL~~ag~~~~~Id~li~-~ss~~~~~p~~a~~l~~~LGl 133 (421)
-..+|++++|+++|++|+|||.|-. .+.+..-.+.-...|.+.+|-
T Consensus 279 ~~~~a~~~Al~~agi~~~did~ie~hgtgt~~~D~~E~~al~~~fg~ 325 (414)
T PRK08722 279 GGALAMEAAMRDAGVTGEQIGYVNAHGTSTPAGDVAEIKGIKRALGE 325 (414)
T ss_pred HHHHHHHHHHHHcCCCHHHcCEEEccCccCCCCCHHHHHHHHHHhcc
Confidence 3578899999999999999998865 343333445556677777763
No 237
>KOG2708 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones]
Probab=56.80 E-value=12 Score=34.82 Aligned_cols=84 Identities=17% Similarity=0.210 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCc-HHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHHccC
Q 014606 87 TVLFSIVQDLFSKHKINPKSIDILITNCSVSCPTPS-VAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLRVQK 165 (421)
Q Consensus 87 ~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~-~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~~g~ 165 (421)
.....-++.+|++++++.+|||.+-+.-.|+...|- ....+++-|.+--+.+...++ -|.|-+.. . .+|...+
T Consensus 51 ~~il~Lv~~al~ea~v~~~diD~icyTKGPGmgaPL~~vaivaRtlsllw~kPlv~VN--HCigHIEM---G-R~iTgA~ 124 (336)
T KOG2708|consen 51 AWILGLVKQALEEAGVTSDDIDCICYTKGPGMGAPLSVVAIVARTLSLLWNKPLVGVN--HCIGHIEM---G-REITGAQ 124 (336)
T ss_pred HHHHHHHHHHHHHcCCChhhCCEEEEcCCCCCCCchhhHHHHHHHHHHHhCCCcccch--hhhhhhhh---c-ceeccCC
Confidence 455666789999999999999988777677777773 344455555432246677777 67765422 1 2233223
Q ss_pred CCeEEEEEecc
Q 014606 166 NSLALVLSMES 176 (421)
Q Consensus 166 ~~~vLvv~~e~ 176 (421)
.-.||-|++-.
T Consensus 125 nPvvLYvSGGN 135 (336)
T KOG2708|consen 125 NPVVLYVSGGN 135 (336)
T ss_pred CCEEEEEeCCc
Confidence 44566665544
No 238
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=56.64 E-value=25 Score=35.97 Aligned_cols=46 Identities=13% Similarity=0.069 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEE-eccCCCCCCcHHHHHHHHcCC
Q 014606 88 VLFSIVQDLFSKHKINPKSIDILIT-NCSVSCPTPSVAAMVINKFGL 133 (421)
Q Consensus 88 la~~Aa~~aL~~ag~~~~~Id~li~-~ss~~~~~p~~a~~l~~~LGl 133 (421)
-..+++++||+++|++++|||.+-. .+.+..-.+.-...|.+.+|-
T Consensus 287 ~~~~a~~~Al~~agi~~~did~ie~hgtgt~~~D~~E~~Al~~~fg~ 333 (418)
T PRK07910 287 RAGHAMTRAIELAGLTPGDIDHVNAHATGTSVGDVAEGKAINNALGG 333 (418)
T ss_pred HHHHHHHHHHHHhCCCHHHCCEEEcCCcCCCCCCHHHHHHHHHHhCC
Confidence 3578999999999999999998865 344443445566777888874
No 239
>PRK14878 UGMP family protein; Provisional
Probab=56.55 E-value=33 Score=33.78 Aligned_cols=53 Identities=13% Similarity=0.127 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCC-----cHHHHHHHHcCCCCCceeeeeeC
Q 014606 88 VLFSIVQDLFSKHKINPKSIDILITNCSVSCPTP-----SVAAMVINKFGLKSNVRSFHLSG 144 (421)
Q Consensus 88 la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p-----~~a~~l~~~LGl~~~~~~~~i~~ 144 (421)
.-..+.+++|+++|++++|||.|.++..|+.... +.|..++..++. +...+++
T Consensus 47 ~l~~~i~~~l~~a~~~~~did~Iavt~gPG~~~~lrvg~~~Ak~la~~~~~----p~~~v~h 104 (323)
T PRK14878 47 VAPELLRKALEKAGISIEDIDAVAVSQGPGLGPALRVGATAARALALKYNK----PLVPVNH 104 (323)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEecCCCcccchHHHHHHHHHHHHHhCC----Cccccch
Confidence 3448999999999999999999998876654322 235556666654 3444553
No 240
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=55.87 E-value=22 Score=36.27 Aligned_cols=45 Identities=9% Similarity=0.124 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEE-eccCCCCCCcHHHHHHHHcC
Q 014606 88 VLFSIVQDLFSKHKINPKSIDILIT-NCSVSCPTPSVAAMVINKFG 132 (421)
Q Consensus 88 la~~Aa~~aL~~ag~~~~~Id~li~-~ss~~~~~p~~a~~l~~~LG 132 (421)
-..++++++|++++++|+|||.+.. .|.+..-.+.-+..|.+.+|
T Consensus 276 ~~~~ai~~AL~~Agi~p~dId~I~~Hgtgt~~~D~~E~~Ai~~~fg 321 (405)
T PRK09116 276 TMQIAMELALKDAGLAPEDIGYVNAHGTATDRGDIAESQATAAVFG 321 (405)
T ss_pred HHHHHHHHHHHHhCCCHHHcCEEECcCccCCCCCHHHHHHHHHHhC
Confidence 3468999999999999999998875 45444344556677778777
No 241
>PLN02854 3-ketoacyl-CoA synthase
Probab=55.82 E-value=56 Score=34.52 Aligned_cols=81 Identities=10% Similarity=0.093 Sum_probs=46.9
Q ss_pred HHHHHHHHHHhCCCCC------CCccEEEEeccCCCCCCcHHHHHHHHcCCC---CCceeeeeeCCcchHHHHHHHHHHH
Q 014606 89 LFSIVQDLFSKHKINP------KSIDILITNCSVSCPTPSVAAMVINKFGLK---SNVRSFHLSGMGCSAGILSISLAKD 159 (421)
Q Consensus 89 a~~Aa~~aL~~ag~~~------~~Id~li~~ss~~~~~p~~a~~l~~~LGl~---~~~~~~~i~~~~C~g~~~al~~A~~ 159 (421)
+...+++.|.++|+.+ ++||+++... .-...-..++++||++ .+.....+...|-.|..+-+..-..
T Consensus 387 ~~~~i~~~L~~~gl~~~~pd~~~didhf~iHq----ggr~IId~v~k~LgL~~~~~e~sr~tL~rfGNTSSASI~~~L~~ 462 (521)
T PLN02854 387 FVTLVRRKLLKAKVKPYIPDFKLAFEHFCIHA----GGRAVLDELQKNLQLSDWHMEPSRMTLHRFGNTSSSSLWYELAY 462 (521)
T ss_pred HHHHHHHHHHHcCCCccCCcccccCcEEEECC----CCHHHHHHHHHHcCCCcccccchHHHhhhcCChHhhHHHHHHHH
Confidence 5677889999999987 5899887643 2234556899999997 2333333332233333333322233
Q ss_pred HHHccC---CCeEEEEE
Q 014606 160 LLRVQK---NSLALVLS 173 (421)
Q Consensus 160 li~~g~---~~~vLvv~ 173 (421)
+.+.|. .++|+.++
T Consensus 463 ~~~kGrik~GD~Vl~ia 479 (521)
T PLN02854 463 TEAKGRVSAGDRVWQIA 479 (521)
T ss_pred HHHcCCCCCCCEEEEEE
Confidence 344443 45566555
No 242
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=55.73 E-value=24 Score=35.60 Aligned_cols=50 Identities=14% Similarity=0.173 Sum_probs=33.7
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCCceeeeeeC
Q 014606 89 LFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSNVRSFHLSG 144 (421)
Q Consensus 89 a~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~~~~~~i~~ 144 (421)
...|+++|++++|+.++|||.+=+.- .+....-...+.||+.+ ..++.++
T Consensus 282 ~~~a~~~a~~~agi~~~did~~e~~d----~Fa~~~~~~~e~lG~~~--~pvN~~G 331 (382)
T PRK07801 282 PIPATRYALEKTGLSIDDIDVVEINE----AFAPVVLAWLKETGADP--AKVNPNG 331 (382)
T ss_pred hHHHHHHHHHHcCCCHHHcCEeeecc----cchHHHHHHHHHhCCCc--hhcCCCc
Confidence 35799999999999999999874321 12233445567788763 3455553
No 243
>cd02185 AroH Chorismate mutase (AroH) is one of at least five chorismate-utilizing enzymes present in microorganisms that catalyze the rearrangement of chorismate to prephenic acid, the first committed step in the biosynthesis of aromatic amino acids. In prokaryotes, chorismate mutase may be fused to prephenate dehydratase, prephenate dehydrogenase, or 3-deoxy-D-arabino-heptulosonat-7-phosphate (DAHP) as part of a bifunctional enzyme. The AroH domain forms a homotrimer with three-fold symmetry.
Probab=55.53 E-value=38 Score=28.09 Aligned_cols=55 Identities=15% Similarity=0.223 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEeccCC--CCCCcHHHHHHHHcCCCCCceeeeeeC
Q 014606 87 TVLFSIVQDLFSKHKINPKSIDILITNCSVS--CPTPSVAAMVINKFGLKSNVRSFHLSG 144 (421)
Q Consensus 87 ~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~--~~~p~~a~~l~~~LGl~~~~~~~~i~~ 144 (421)
+=..+-.++.+++.+++++||-.++|+.++| ..+| +..++++|.-.+++.++...
T Consensus 20 ~at~eLl~~i~~~N~l~~edivSv~FT~T~DL~a~FP---A~aaR~~~~~~~Vplmc~qE 76 (117)
T cd02185 20 EATRELLEEIIERNNIKPEDIISVIFTVTPDLDAAFP---AKAARELGGWKYVPLMCAQE 76 (117)
T ss_pred HHHHHHHHHHHHHcCCCHHHEEEEEEEeCCcccccCh---HHHHHhcCCCCCcceeecCc
Confidence 3334455677788999999999999987775 3455 35556664333677666553
No 244
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=55.41 E-value=71 Score=32.34 Aligned_cols=41 Identities=12% Similarity=0.017 Sum_probs=28.2
Q ss_pred HHHHHHHHHhCCCC--CCCccEEEEeccCCCCCCcHHHHHHHHcCCC
Q 014606 90 FSIVQDLFSKHKIN--PKSIDILITNCSVSCPTPSVAAMVINKFGLK 134 (421)
Q Consensus 90 ~~Aa~~aL~~ag~~--~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~ 134 (421)
..|++++++++|++ ++|||.+-+.= .+....-...+.||+.
T Consensus 259 ~~Aa~~a~~~AGi~~p~~DiD~~ei~D----~Ft~~~l~~~e~lG~~ 301 (385)
T PRK06066 259 RIAADMAYKMAGIESPRKEVDAAEVDD----RYSYKELQHIEALRLS 301 (385)
T ss_pred HHHHHHHHHHcCCCCCHHHCcEEEEec----CChHHHHHHHHHcCCC
Confidence 37999999999997 69999886541 1223334455666654
No 245
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=55.26 E-value=19 Score=36.70 Aligned_cols=76 Identities=13% Similarity=0.275 Sum_probs=42.4
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCCceeeeeeC--------CcchHHHHHHHHHHHH
Q 014606 89 LFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSNVRSFHLSG--------MGCSAGILSISLAKDL 160 (421)
Q Consensus 89 a~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~~~~~~i~~--------~~C~g~~~al~~A~~l 160 (421)
...|+++||+++|++++|||.+=.. ...+...-.-.+.||+.++ .+..++ .||+|....+.+..+|
T Consensus 305 ~~~a~~~al~~Agi~~~did~~ei~----d~f~~~~l~~le~lg~~~~--pvN~~GG~l~~Ghp~gasg~~~~~~~~~qL 378 (406)
T PRK07851 305 PVEASKQALARAGMSIDDIDLVEIN----EAFAAQVLPSARELGIDED--KLNVSGGAIALGHPFGMTGARITTTLLNNL 378 (406)
T ss_pred HHHHHHHHHHHhCCCHHHCCeehhh----hHHHHHHHHHHHHhCCCcc--ccCCCCChHhhcCcHHHHHHHHHHHHHHHH
Confidence 4589999999999999999987321 0122222333467776421 222221 2445555555555665
Q ss_pred HHccCCCeEEE
Q 014606 161 LRVQKNSLALV 171 (421)
Q Consensus 161 i~~g~~~~vLv 171 (421)
-+. ..+..|+
T Consensus 379 ~~~-~~~~g~~ 388 (406)
T PRK07851 379 QTH-DKTFGLE 388 (406)
T ss_pred Hhc-CCCeEEE
Confidence 443 2344433
No 246
>PRK06059 lipid-transfer protein; Provisional
Probab=55.08 E-value=46 Score=33.72 Aligned_cols=41 Identities=12% Similarity=0.196 Sum_probs=28.4
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCC
Q 014606 90 FSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLK 134 (421)
Q Consensus 90 ~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~ 134 (421)
..|++++++++|++++|||.+=+.-. .....-...+.||+.
T Consensus 276 ~~a~~~a~~~agl~~~Did~~El~d~----f~~~~l~~~e~lGl~ 316 (399)
T PRK06059 276 DQILDAAYAEAGIGPEDLSLAEVYDL----STALELDWYEHLGLC 316 (399)
T ss_pred HHHHHHHHHHcCCCHHHCcEEeeccc----ChHHHHHHHHHcCCC
Confidence 57899999999999999998865421 112223334777765
No 247
>PRK07937 lipid-transfer protein; Provisional
Probab=54.95 E-value=53 Score=32.78 Aligned_cols=78 Identities=13% Similarity=0.026 Sum_probs=43.0
Q ss_pred HHHHHHHHHh-CCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCCceeeeeeC-------CcchHHHHHHHHHHHHH
Q 014606 90 FSIVQDLFSK-HKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSNVRSFHLSG-------MGCSAGILSISLAKDLL 161 (421)
Q Consensus 90 ~~Aa~~aL~~-ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~~~~~~i~~-------~~C~g~~~al~~A~~li 161 (421)
..++++++++ +|++|+|||.+=+.- .++...-...+.||+.. -..++.++ .||+|.....+.+.++.
T Consensus 249 ~~~~~~a~~~aAgi~~~diD~~Ei~D----~F~~~~l~~~e~lGl~g-~~pvN~~GG~l~ghp~gatG~~~~~e~~~QL~ 323 (352)
T PRK07937 249 SPSTALAAEAATGGDAGGVDVAELHA----PFTHQELILREALGLGD-KTKVNPSGGALAANPMFAAGLERIGEAARHIW 323 (352)
T ss_pred HHHHHHHHHHhcCCCHHHCCEEEEeC----CChHHHHHHHHHcCCCC-CCCcCCCccchhcCchhHHHHHHHHHHHHHHh
Confidence 3444556666 599999999886542 23344456678888752 23444443 13334444444444443
Q ss_pred HccCCCeEEEEE
Q 014606 162 RVQKNSLALVLS 173 (421)
Q Consensus 162 ~~g~~~~vLvv~ 173 (421)
.+..+++|+.+
T Consensus 324 -g~~a~~~l~~~ 334 (352)
T PRK07937 324 -DGSARRALAHA 334 (352)
T ss_pred -ccCCCEEEEec
Confidence 33456666543
No 248
>PRK12404 stage V sporulation protein AD; Provisional
Probab=54.47 E-value=47 Score=32.75 Aligned_cols=74 Identities=16% Similarity=0.067 Sum_probs=48.6
Q ss_pred hhhhhcCCCCCCCCCCCCCccccccEEEecCCC-HHHH-HHHHHHCCCChhhhHHHHHHHhccCCCccchHHHHHHHH-H
Q 014606 287 VTWKKIWPPGRKRGPYIPDFRKAFEHFCVHAGG-KAVI-DAIKENLKLKDRDVEASKTTLYRFGNTSSSSVWYELSYL-E 363 (421)
Q Consensus 287 ~i~~~l~~~gl~~~~~~~~~~~did~~i~Hq~~-~~~~-~~i~~~lgl~~~~~~~s~~~l~~~Gn~~sasi~i~L~~~-~ 363 (421)
++.++|.++|++ ++|||.++..... ..+. ..+++.||+|. +.-+|-|++..--+.++.+ +
T Consensus 61 A~~~AL~kAGI~--------~~DID~i~vGdL~nQ~ipssfvar~LGIP~---------~gV~gACSTg~eAL~lAa~~V 123 (334)
T PRK12404 61 ACSRAIEKAKLR--------KEDIQFFLAGDLMNQITPTSFAARTLGIPY---------LGLFGACSTSMEGLALAALIV 123 (334)
T ss_pred HHHHHHHHcCCC--------HHHCCEEEEEecCCCcCcHHHHHHHhCCCc---------cceeecCHHHHHHHHHHHHHH
Confidence 344677789998 4999999995432 1111 26778899773 3457888887777777754 4
Q ss_pred HcCCCCCCCeEEEEeec
Q 014606 364 AKGKVKKGDKIWQLAFG 380 (421)
Q Consensus 364 ~~g~~~~Gd~vll~~~G 380 (421)
+.|. .|++|.++..
T Consensus 124 aSG~---Ad~VLavtsS 137 (334)
T PRK12404 124 NSGG---AKYVLTGASS 137 (334)
T ss_pred HcCC---CCEEEEEeCc
Confidence 4443 4777765543
No 249
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=53.95 E-value=30 Score=35.11 Aligned_cols=71 Identities=20% Similarity=0.367 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCCceeeeeeC--------CcchHHHHHHHHHHH
Q 014606 88 VLFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSNVRSFHLSG--------MGCSAGILSISLAKD 159 (421)
Q Consensus 88 la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~~~~~~i~~--------~~C~g~~~al~~A~~ 159 (421)
-...|++++|+++|++++|||.+-+.- .++...-...+.||+.+ ..+.+++ .|++|....+.++.+
T Consensus 290 ~~~~a~~~al~~agl~~~did~~ei~d----~f~~~~l~~~e~lg~~~--~~vN~~GG~~a~Ghp~gasG~~~~~el~~q 363 (391)
T PRK07661 290 GPIAAIPKALKLAGLELSDIGLFELNE----AFASQSIQVIRELGLDE--EKVNVNGGAIALGHPLGCTGAKLTLSLIHE 363 (391)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEeCC----HHHHHHHHHHHHcCCCC--CCCCCCCChHHhCCcHHHHHHHHHHHHHHH
Confidence 346899999999999999999886421 12222333345778642 2233332 244555555666666
Q ss_pred HHHcc
Q 014606 160 LLRVQ 164 (421)
Q Consensus 160 li~~g 164 (421)
|-+.+
T Consensus 364 L~~~~ 368 (391)
T PRK07661 364 MKRRN 368 (391)
T ss_pred HHhcC
Confidence 65543
No 250
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=53.67 E-value=26 Score=35.54 Aligned_cols=68 Identities=19% Similarity=0.309 Sum_probs=40.4
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHH--HHHcCCCCCceeeeeeC--------CcchHHHHHHHHHH
Q 014606 89 LFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMV--INKFGLKSNVRSFHLSG--------MGCSAGILSISLAK 158 (421)
Q Consensus 89 a~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l--~~~LGl~~~~~~~~i~~--------~~C~g~~~al~~A~ 158 (421)
...|+++||+++|++++|||.+-+. .+-....+ .+.||+. ...+.+++ .|++|....+.++.
T Consensus 292 ~~~a~~~Al~~AGl~p~DID~~ei~------dafa~~~l~~~~~l~~~--~~~vN~sGg~~a~GHplgAtG~~~~~~~~~ 363 (392)
T PRK06633 292 PVPASQKALSKAGWSVNDLEVIEVN------EAFAAQSIYVNREMKWD--MEKVNINGGAIAIGHPIGASGGRVLITLIH 363 (392)
T ss_pred HHHHHHHHHHHcCCCHHHcCeeehh------hHHHHHHHHHHhhhCCC--ccccCCCCchHhhCCcHHHHHHHHHHHHHH
Confidence 4689999999999999999987632 11111122 3344432 11222221 35666677777777
Q ss_pred HHHHcc
Q 014606 159 DLLRVQ 164 (421)
Q Consensus 159 ~li~~g 164 (421)
+|-+.+
T Consensus 364 qL~~~~ 369 (392)
T PRK06633 364 GLRRAK 369 (392)
T ss_pred HHHhcC
Confidence 776544
No 251
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=53.57 E-value=23 Score=36.26 Aligned_cols=44 Identities=14% Similarity=0.194 Sum_probs=31.3
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCCcHHHHHHHHcC
Q 014606 89 LFSIVQDLFSKHKINPKSIDILITN-CSVSCPTPSVAAMVINKFG 132 (421)
Q Consensus 89 a~~Aa~~aL~~ag~~~~~Id~li~~-ss~~~~~p~~a~~l~~~LG 132 (421)
..++++++|+++|++++|||++... +.+....+.-...|...+|
T Consensus 291 ~~~ai~~AL~~agi~p~dId~i~~Hgtgt~~~d~~E~~al~~~~~ 335 (425)
T PRK06501 291 AIGAIRAALADAGLTPEQIDYINAHGTSTPENDKMEYLGLSAVFG 335 (425)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecCccCcchHHHHHHHHHHHhc
Confidence 5688999999999999999998864 4333333444455555565
No 252
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=52.93 E-value=26 Score=35.78 Aligned_cols=45 Identities=16% Similarity=0.116 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEE-eccCCCCCCcHHHHHHHHcC
Q 014606 88 VLFSIVQDLFSKHKINPKSIDILIT-NCSVSCPTPSVAAMVINKFG 132 (421)
Q Consensus 88 la~~Aa~~aL~~ag~~~~~Id~li~-~ss~~~~~p~~a~~l~~~LG 132 (421)
-..+|+++||+++|++|+|||.|-. .+.+....+.-...+...+|
T Consensus 289 ~~~~a~~~Al~~Agi~p~dId~i~~hgtgt~~~D~~E~~al~~~fg 334 (424)
T PRK06333 289 GARRAMLIALRQAGIPPEEVQHLNAHATSTPVGDLGEVAAIKKVFG 334 (424)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEeccCCCCccchHHHHHHHHHHhC
Confidence 4578999999999999999998865 34333233344566677776
No 253
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=52.82 E-value=30 Score=35.15 Aligned_cols=69 Identities=20% Similarity=0.288 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCCceeeeeeC--------CcchHHHHHHHHHHH
Q 014606 88 VLFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSNVRSFHLSG--------MGCSAGILSISLAKD 159 (421)
Q Consensus 88 la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~~~~~~i~~--------~~C~g~~~al~~A~~ 159 (421)
....|+++||+++|++++|||.+-+. ..++...-...+.||+.+ ..+.+++ .||+|....+.++.+
T Consensus 292 ~~~~a~~~al~~agl~~~did~~e~~----d~f~~~~l~~~e~lg~~~--~pvN~~GG~la~Ghp~gasG~~~~~~l~~q 365 (393)
T PRK08235 292 TPGYAINALLEKTGKTVEDIDLFEIN----EAFAAVALASTEIAGIDP--EKVNVNGGAVALGHPIGASGARIIVTLIHE 365 (393)
T ss_pred hHHHHHHHHHHHhCCCHHHCCeehhc----chhHHHHHHHHHHhCCCc--ccCCcCCchHHhCCcHHHHHHHHHHHHHHH
Confidence 34689999999999999999987532 122333445567888752 2333332 244555555566666
Q ss_pred HHH
Q 014606 160 LLR 162 (421)
Q Consensus 160 li~ 162 (421)
|-.
T Consensus 366 L~~ 368 (393)
T PRK08235 366 LKR 368 (393)
T ss_pred HHh
Confidence 653
No 254
>PRK09585 anmK anhydro-N-acetylmuramic acid kinase; Reviewed
Probab=52.66 E-value=40 Score=33.87 Aligned_cols=64 Identities=16% Similarity=0.259 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCC--------cHHHHHHHHcCCCC--Cceeeeee
Q 014606 80 SSMEELKTVLFSIVQDLFSKHKINPKSIDILITNCSVSCPTP--------SVAAMVINKFGLKS--NVRSFHLS 143 (421)
Q Consensus 80 ~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p--------~~a~~l~~~LGl~~--~~~~~~i~ 143 (421)
..+.+..++-.+|++++++++++++++||+|=....+-+..| +.+..|+.++|++- +-+.-|+.
T Consensus 64 ~l~~~lg~~~a~av~~~~~~~~l~~~~id~IgsHGQTv~H~P~~~~TlQiG~~~~iA~~tgi~VV~DFR~~D~a 137 (365)
T PRK09585 64 ELDTALGRLFAEAVNALLAEAGLSPEDIDAIGSHGQTVRHRPGEGFTLQIGDGALIAELTGITVVADFRRRDVA 137 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCccCccEEEeCCcccccCCCCCCeEEcCCHHHHHHHHCcCEEecChHHHHh
Confidence 445566789999999999999999999998876543322222 34788999999861 33444555
No 255
>PRK08304 stage V sporulation protein AD; Validated
Probab=51.94 E-value=32 Score=34.02 Aligned_cols=75 Identities=11% Similarity=0.021 Sum_probs=43.4
Q ss_pred HhhhhhcCCCCCCCCCCCCCccccccEEEecCCC-HH-HHHHHHHHCCCChhhhHHHHHHHhccCCCccchHHHHHHH-H
Q 014606 286 SVTWKKIWPPGRKRGPYIPDFRKAFEHFCVHAGG-KA-VIDAIKENLKLKDRDVEASKTTLYRFGNTSSSSVWYELSY-L 362 (421)
Q Consensus 286 ~~i~~~l~~~gl~~~~~~~~~~~did~~i~Hq~~-~~-~~~~i~~~lgl~~~~~~~s~~~l~~~Gn~~sasi~i~L~~-~ 362 (421)
+++.++|+++|++ ++|||.++..... .. .-..+.+.||+|.- .-++.|++...-+.++. +
T Consensus 62 eAa~~ALekAGI~--------~~DID~lI~Gdll~Q~~sAs~vA~~LGIPa~---------dV~gACST~~~AL~lAa~l 124 (337)
T PRK08304 62 DAIQQALQKANLK--------KSDIDYLLAGDLLNQIISANFAARELGIPFL---------GLYGACSTMMESLALGSML 124 (337)
T ss_pred HHHHHHHHHcCCC--------HHHCCEEEEECCCCCcchHHHHHHHhCCcEE---------EEeccCHHHHHHHHHHHHH
Confidence 3445778888998 4999999884321 11 22235677887532 33566655555554543 3
Q ss_pred HHcCCCCCCCeEEEEeec
Q 014606 363 EAKGKVKKGDKIWQLAFG 380 (421)
Q Consensus 363 ~~~g~~~~Gd~vll~~~G 380 (421)
++.|. .|++|+++..
T Consensus 125 I~SG~---ad~VLVV~Ss 139 (337)
T PRK08304 125 IDGGF---ADRVLAATSS 139 (337)
T ss_pred HhcCC---CCEEEEEEcc
Confidence 44443 4777776543
No 256
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=49.80 E-value=47 Score=33.56 Aligned_cols=46 Identities=13% Similarity=0.340 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCCcHHHHHHHHcC
Q 014606 87 TVLFSIVQDLFSKHKINPKSIDILITN-CSVSCPTPSVAAMVINKFG 132 (421)
Q Consensus 87 ~la~~Aa~~aL~~ag~~~~~Id~li~~-ss~~~~~p~~a~~l~~~LG 132 (421)
.-..+|+++||+++|++++|||.+... +.+......-...+...++
T Consensus 279 ~~~~~a~~~al~~Agi~~~did~i~~hgtgt~~~D~~E~~al~~~f~ 325 (421)
T cd00833 279 EAQAALIRRAYARAGVDPSDIDYVEAHGTGTPLGDPIEVEALAKVFG 325 (421)
T ss_pred HHHHHHHHHHHHHhCCCHHHCcEEEeeCCCCCCCCHHHHHHHHHHHh
Confidence 345689999999999999999998864 4322222333344444443
No 257
>PF12633 Adenyl_cycl_N: Adenylate cyclase NT domain; InterPro: IPR024685 Adenylate cyclase is the enzyme responsible for the synthesis of cAMP from ATP. On the basis of sequence similarity, it has been proposed that there are three different classes of adenylate cyclases [, ]. Class I cyclases are found in enterobacteria and related Gram-negative bacteria. This entry represents the N-terminal domain of class-I adenylate cyclases.
Probab=49.70 E-value=18 Score=33.13 Aligned_cols=56 Identities=7% Similarity=0.071 Sum_probs=40.4
Q ss_pred cccccEEEecCCCH------------HHHHHHHHHCCC-------ChhhhHHHHHHHhc----cCCCccchHHHHHHHHH
Q 014606 307 RKAFEHFCVHAGGK------------AVIDAIKENLKL-------KDRDVEASKTTLYR----FGNTSSSSVWYELSYLE 363 (421)
Q Consensus 307 ~~did~~i~Hq~~~------------~~~~~i~~~lgl-------~~~~~~~s~~~l~~----~Gn~~sasi~i~L~~~~ 363 (421)
.+|+|.||+|+... ..+..+++.+|+ +++++. .+-.. --|+|||--.+.|++..
T Consensus 114 ~SDlDiWvCh~~~L~~~~~~~Lq~K~~~i~~WA~~~gvEv~FfLmd~~~fr---~~~~~~~~~~E~~GSaQh~LLLdEFY 190 (204)
T PF12633_consen 114 SSDLDIWVCHDSDLSPEERQLLQQKCDLIEQWAASFGVEVHFFLMDEERFR---HNRSGSPLTGESCGSAQHLLLLDEFY 190 (204)
T ss_pred CCCCeEEEEcCCCCCHHHHHHHHHHHHHHHHHHHHcCCEEEEEEECHHHHh---cCCcccCCCCCCChHHHHHHHHHHHH
Confidence 58999999999743 455668888887 455653 22211 24799999999999987
Q ss_pred Hc
Q 014606 364 AK 365 (421)
Q Consensus 364 ~~ 365 (421)
+.
T Consensus 191 RT 192 (204)
T PF12633_consen 191 RT 192 (204)
T ss_pred HH
Confidence 74
No 258
>TIGR03725 bact_YeaZ universal bacterial protein YeaZ. This family describes a protein family, YeaZ, that appears to be universal in bacteria, but whose function is unknown. This family is related to the gcp (glycoprotease) protein family, also universal in bacteria and unknown in function. In Gram-positive lineages, members of these two related families often belong to the same operon, along with the ribosomal-protein-alanine acetyltransferase gene. Members of this family may occur as fusions with gcp or the ribosomal protein N-acetyltransferase rimI, and is frequently encoded next to rimI.
Probab=49.55 E-value=24 Score=32.13 Aligned_cols=54 Identities=13% Similarity=0.268 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCC-----cHHHHHHHHcCCCCCceeeeee
Q 014606 86 KTVLFSIVQDLFSKHKINPKSIDILITNCSVSCPTP-----SVAAMVINKFGLKSNVRSFHLS 143 (421)
Q Consensus 86 ~~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p-----~~a~~l~~~LGl~~~~~~~~i~ 143 (421)
.+.....++++|+++|++.+|||.|.++..|+.... +.|.-++..++ ++.+.++
T Consensus 34 ~~~l~~~i~~~l~~~~~~~~~i~~iav~~GPGSfTGlRig~~~akgla~~~~----~p~~~vs 92 (202)
T TIGR03725 34 SEILLPMIEELLAEAGLSLQDLDAIAVGVGPGSFTGLRIGLATAKGLALALG----IPLVGVS 92 (202)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecCCChHHhHHHHHHHHHHHHHHhC----CCEEecC
Confidence 456777899999999999999999999876654332 23334444443 4555555
No 259
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=49.43 E-value=43 Score=32.68 Aligned_cols=75 Identities=9% Similarity=0.047 Sum_probs=47.6
Q ss_pred HHHHHHHHhhhhhcCCCCCCCCCCCCCccccccEEEecCCC----HHHHHHHHHHCCCChhhhHHHHHHHhccCCCccch
Q 014606 279 ELVWYAVSVTWKKIWPPGRKRGPYIPDFRKAFEHFCVHAGG----KAVIDAIKENLKLKDRDVEASKTTLYRFGNTSSSS 354 (421)
Q Consensus 279 ~~~~~~~~~i~~~l~~~gl~~~~~~~~~~~did~~i~Hq~~----~~~~~~i~~~lgl~~~~~~~s~~~l~~~Gn~~sas 354 (421)
+.....++...++|...++.+ +|||.+++-... ..+--.+.++||+++..- +.-+--.|-.+.++
T Consensus 75 ~a~~l~v~a~r~aL~~~~l~p--------edId~vv~vtsTG~~~Ps~dari~~~Lgl~p~~~---Rvpv~glGCaaga~ 143 (356)
T COG3424 75 EAVPLGVDALRRALDGSPLRP--------EDIDAVVTVTSTGLATPSLDARIVGELGLSPDTR---RVPVWGLGCAAGAA 143 (356)
T ss_pred HHHHHHHHHHHHHhccCCCCH--------HHCcEEEEEeeccccCCChhHHHHhhcCCCCccc---eeeeecchhhhhhh
Confidence 334456677778898888884 999999985543 345667899999997633 22333345444444
Q ss_pred HHHHHHHHHH
Q 014606 355 VWYELSYLEA 364 (421)
Q Consensus 355 i~i~L~~~~~ 364 (421)
-.-...+..+
T Consensus 144 glara~~y~r 153 (356)
T COG3424 144 GLARARDYCR 153 (356)
T ss_pred HHHHHHHHHh
Confidence 4444444444
No 260
>TIGR03722 arch_KAE1 universal archaeal protein Kae1. This family represents the archaeal protein Kae1. Its partner Bud32 is fused with it in about half of the known archaeal genomes. The pair, which appears universal in the archaea, corresponds to EKC/KEOPS complex in eukaryotes. A recent characterization of the member from Pyrococcus abyssi, as an iron-binding, atypical DNA-binding protein with an apurinic lyase activity, challenges the common annotation of close homologs as O-sialoglycoprotein endopeptidase. The latter annotation is based on a characterized protein from the bacterium Pasteurella haemolytica.
Probab=48.52 E-value=45 Score=32.76 Aligned_cols=53 Identities=9% Similarity=0.075 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCC-----cHHHHHHHHcCCCCCceeeeeeC
Q 014606 88 VLFSIVQDLFSKHKINPKSIDILITNCSVSCPTP-----SVAAMVINKFGLKSNVRSFHLSG 144 (421)
Q Consensus 88 la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p-----~~a~~l~~~LGl~~~~~~~~i~~ 144 (421)
.-...++++|+++|++++|||.|.++.-|+.... ..|..++..+++ +...+++
T Consensus 48 ~l~~~i~~~l~~~~~~~~did~Iavt~gPg~~~~l~vg~~~ak~la~~~~~----p~~~v~h 105 (322)
T TIGR03722 48 VAPKLIKEALEEAGVSLEDIDAVAFSQGPGLGPCLRVGATAARALALKLNK----PLVGVNH 105 (322)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEecCCchHHhHHHHHHHHHHHHHHhCC----Ceechhh
Confidence 3344599999999999999999998876543211 125555555554 4555554
No 261
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=48.46 E-value=30 Score=35.11 Aligned_cols=23 Identities=17% Similarity=0.212 Sum_probs=20.7
Q ss_pred HHHHHHHHHHhCCCCCCCccEEE
Q 014606 89 LFSIVQDLFSKHKINPKSIDILI 111 (421)
Q Consensus 89 a~~Aa~~aL~~ag~~~~~Id~li 111 (421)
...|+++||+++|++++|||.+-
T Consensus 292 ~~~a~~~al~~agl~~~Did~~e 314 (392)
T PRK07108 292 PVFAVPKLLKQAGLKVDDIDLWE 314 (392)
T ss_pred HHHHHHHHHHHcCCCHHHcCchH
Confidence 47899999999999999999774
No 262
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=47.67 E-value=43 Score=34.43 Aligned_cols=45 Identities=11% Similarity=0.153 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCCcHHHHHHHHcC
Q 014606 88 VLFSIVQDLFSKHKINPKSIDILITN-CSVSCPTPSVAAMVINKFG 132 (421)
Q Consensus 88 la~~Aa~~aL~~ag~~~~~Id~li~~-ss~~~~~p~~a~~l~~~LG 132 (421)
-..+|+++||+++|++++|||.|-.. +.+....+.-...+...+|
T Consensus 300 ~~~~a~~~Al~~Agi~~~dId~ve~hgtgt~~~D~~E~~ai~~~~~ 345 (437)
T PLN02836 300 GAVLAMTRALQQSGLHPNQVDYVNAHATSTPLGDAVEARAIKTVFS 345 (437)
T ss_pred HHHHHHHHHHHHcCCCHhHcCEEEccCCcCcCcCHHHHHHHHHHhc
Confidence 35678999999999999999988754 4332223333444555554
No 263
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=47.05 E-value=50 Score=33.49 Aligned_cols=41 Identities=15% Similarity=0.131 Sum_probs=29.2
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCC
Q 014606 90 FSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLK 134 (421)
Q Consensus 90 ~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~ 134 (421)
..+++++|+++|++++|||.+=+.- .+....-...+.||+.
T Consensus 294 ~~a~~~al~~Agi~~~Did~~Ei~d----~f~~~~l~~~e~lg~~ 334 (394)
T PLN02644 294 ALAIPKALKHAGLEASQVDYYEINE----AFSVVALANQKLLGLD 334 (394)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEeCc----HHHHHHHHHHHHhCCC
Confidence 4699999999999999999886521 1223334456677764
No 264
>PRK13410 molecular chaperone DnaK; Provisional
Probab=46.68 E-value=71 Score=34.94 Aligned_cols=69 Identities=16% Similarity=0.139 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHH
Q 014606 83 EELKTVLFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSIS 155 (421)
Q Consensus 83 ~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~ 155 (421)
++..+-..+.++++|+++|+.+++||.|+++... .-+|..-..|...+|.. ....++..-|.+.-.|++
T Consensus 305 ~~l~~r~~~~i~~~L~~ag~~~~dId~VvLVGGs-sRiP~V~~~l~~~fg~~---~~~~~npdeaVA~GAAi~ 373 (668)
T PRK13410 305 GDLLDRLLRPVKRALKDAGLSPEDIDEVVLVGGS-TRMPMVQQLVRTLIPRE---PNQNVNPDEVVAVGAAIQ 373 (668)
T ss_pred HHHHHHHHHHHHHHHHHcCCChhhCcEEEEECCc-cccHHHHHHHHHHcCCC---cccCCCCchHHHHhHHHH
Confidence 3345566677889999999999999999987521 24788888999999864 234445334554444544
No 265
>PF00814 Peptidase_M22: Glycoprotease family; InterPro: IPR000905 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M22 (clan MK). The type example being O-sialoglycoprotein endopeptidase (3.4.24.57 from EC) from Pasteurella haemolytica (Mannheimia haemolytica). O-Sialoglycoprotein endopeptidase is secreted by the bacterium P. haemolytica, and digests only proteins that are heavily sialylated, in particular those with sialylated serine and threonine residues []. Substrate proteins include glycophorin A and leukocyte surface antigens CD34, CD43, CD44 and CD45 [, ]. Removal of glycosylation, by treatment with neuraminidase, completely negates susceptibility to O-sialoglycoprotein endopeptidase digestion [, ]. Sequence similarity searches have revealed other members of the M22 family, from yeast, Mycobacterium, Haemophilus influenzae and the cyanobacterium Synechocystis []. The zinc-binding and catalytic residues of this family have not been determined, although the motif HMEGH may be a zinc-binding region [].; GO: 0004222 metalloendopeptidase activity, 0006508 proteolysis; PDB: 2A6A_A 2GEL_G 2GEM_B 1OKJ_B 3ENO_A 3EN9_B 2VWB_B 3ENH_B 2IVO_D 2IVP_A ....
Probab=45.91 E-value=13 Score=35.50 Aligned_cols=54 Identities=17% Similarity=0.154 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCC-----cHHHHHHHHcCCCCCceeeeeeC
Q 014606 87 TVLFSIVQDLFSKHKINPKSIDILITNCSVSCPTP-----SVAAMVINKFGLKSNVRSFHLSG 144 (421)
Q Consensus 87 ~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p-----~~a~~l~~~LGl~~~~~~~~i~~ 144 (421)
+......+++|++++++++|||.|.++..|+.... +.|..++..++ .+.+.++.
T Consensus 31 ~~L~~~i~~~l~~~~~~~~did~iavt~GPGsftgLrvG~~~Ak~La~~~~----~Pli~v~~ 89 (268)
T PF00814_consen 31 ENLPPLIEELLKEAGISLSDIDAIAVTRGPGSFTGLRVGLSFAKGLALALN----IPLIGVSH 89 (268)
T ss_dssp HHHHHHHHHHHHHHTS-GGGESEEEEEEESS-HHHHHHHHHHHHHHHHHTT------EEEEEH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEecCCCcccccHHHHHHHHHHHHHhC----CCeEeecc
Confidence 56678899999999999999999999877764322 23344455543 56777774
No 266
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=42.41 E-value=69 Score=33.79 Aligned_cols=54 Identities=7% Similarity=0.191 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCC-----cHHHHHHHHcCCCCCceeeeeeC
Q 014606 86 KTVLFSIVQDLFSKHKINPKSIDILITNCSVSCPTP-----SVAAMVINKFGLKSNVRSFHLSG 144 (421)
Q Consensus 86 ~~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p-----~~a~~l~~~LGl~~~~~~~~i~~ 144 (421)
..|. .+++++|+++|++++|||.|.++..|+.... +.|..++..+|. +...+++
T Consensus 50 ~~l~-~~i~~~l~~~~~~~~~id~iav~~gPg~~~~l~vg~~~ak~la~~~~~----~~~~v~h 108 (535)
T PRK09605 50 EAIP-KVIKEALEEAGLKPEDIDLVAFSQGPGLGPCLRVVATAARALALSLDV----PLIGVNH 108 (535)
T ss_pred HHHH-HHHHHHHHHcCCCHhhCCEEEECCCCCcHhhHHHHHHHHHHHHHHhCC----CeecccH
Confidence 3344 8899999999999999999988776653221 224455555554 4555554
No 267
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=41.49 E-value=80 Score=32.46 Aligned_cols=42 Identities=12% Similarity=0.116 Sum_probs=29.4
Q ss_pred HHHHHHHHHHhCCCC--CCCccEEEEeccCCCCCCcHHHHHHHHcCCC
Q 014606 89 LFSIVQDLFSKHKIN--PKSIDILITNCSVSCPTPSVAAMVINKFGLK 134 (421)
Q Consensus 89 a~~Aa~~aL~~ag~~--~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~ 134 (421)
...|++++++++|++ ++|||.+-+.- .++...-...+.||+.
T Consensus 295 ~~~a~~~a~~~AGl~~~~~DiD~~Ei~D----~Fa~~~l~~lE~lGl~ 338 (430)
T PRK06365 295 GRMAAKEAYEMAGITDPLNDLDLIELHD----AYTSSEIQTYEDLGLC 338 (430)
T ss_pred HHHHHHHHHHHcCCCCCHHHCCEEEeec----CCcHHHHHHHHHcCCC
Confidence 458999999999997 79999886542 1233334555666665
No 268
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=41.23 E-value=92 Score=31.98 Aligned_cols=26 Identities=0% Similarity=-0.083 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEe
Q 014606 88 VLFSIVQDLFSKHKINPKSIDILITN 113 (421)
Q Consensus 88 la~~Aa~~aL~~ag~~~~~Id~li~~ 113 (421)
-...|++++|+++|++++|||.+-+.
T Consensus 310 ~~~~a~~~al~~AGl~~~DiD~~Ei~ 335 (428)
T PRK08963 310 GPAYATPLALERAGLTLADLTLIDMH 335 (428)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEc
Confidence 34678999999999999999987654
No 269
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=41.14 E-value=39 Score=34.26 Aligned_cols=43 Identities=12% Similarity=0.061 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCC
Q 014606 88 VLFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLK 134 (421)
Q Consensus 88 la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~ 134 (421)
....|+++|++++|++++|||.+-+-. .++...-...+.||+.
T Consensus 256 ~~~~aa~~a~~~AGi~~~did~~elyD----~Fs~~~~~~~E~lGl~ 298 (388)
T PRK08142 256 GAAWSGPAAFAEAGVTPADIKYASIYD----SFTITVLMQLEDLGFC 298 (388)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEec----cchHHHHHHHHHcCCC
Confidence 446899999999999999999765532 1223334445666653
No 270
>TIGR02845 spore_V_AD stage V sporulation protein AD. Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.
Probab=40.62 E-value=79 Score=31.22 Aligned_cols=74 Identities=15% Similarity=0.131 Sum_probs=42.4
Q ss_pred hhhhhcCCCCCCCCCCCCCccccccEEEecCC-CHH-HHHHHHHHCCCChhhhHHHHHHHhccCCCccchHHHHHH-HHH
Q 014606 287 VTWKKIWPPGRKRGPYIPDFRKAFEHFCVHAG-GKA-VIDAIKENLKLKDRDVEASKTTLYRFGNTSSSSVWYELS-YLE 363 (421)
Q Consensus 287 ~i~~~l~~~gl~~~~~~~~~~~did~~i~Hq~-~~~-~~~~i~~~lgl~~~~~~~s~~~l~~~Gn~~sasi~i~L~-~~~ 363 (421)
+..++|+++|++ ++|||.++.... +.. .-..+.+.||+|. +.-++-|++...-+.++ .++
T Consensus 57 Aa~~ALekAGL~--------~~DID~IIvGdl~~Q~~~As~vA~~LGIP~---------fdV~~ACSTf~~AL~lAa~lI 119 (327)
T TIGR02845 57 AVNLALKKANLK--------KDDVDFFLAGDLLNQIITANFVARDLGIPF---------LGLYGACSTSMETLALGAMLV 119 (327)
T ss_pred HHHHHHHHcCCC--------HHHCCEEEEeCCCCcccHHHHHHHHhCCCE---------EEEeccCHHHHHHHHHHHHHH
Confidence 344677788998 499999987432 111 2234667888753 22345554444444444 335
Q ss_pred HcCCCCCCCeEEEEeec
Q 014606 364 AKGKVKKGDKIWQLAFG 380 (421)
Q Consensus 364 ~~g~~~~Gd~vll~~~G 380 (421)
+.|. .|++|+++..
T Consensus 120 ~SG~---ad~VLVV~Ss 133 (327)
T TIGR02845 120 DGGF---ADRVLAATSS 133 (327)
T ss_pred hCCC---CCEEEEEEec
Confidence 4443 4778877643
No 271
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=39.36 E-value=22 Score=32.73 Aligned_cols=37 Identities=19% Similarity=0.306 Sum_probs=25.7
Q ss_pred ccchHHHHHHHHHHcCCCCCCCeEEEEeecccccccc
Q 014606 351 SSSSVWYELSYLEAKGKVKKGDKIWQLAFGSGFKCNS 387 (421)
Q Consensus 351 ~sasi~i~L~~~~~~g~~~~Gd~vll~~~G~G~~~~~ 387 (421)
.+-+.|...+.+++.=.+++|++||=+|.|.|+..+.
T Consensus 53 ~~is~P~~~a~~l~~L~l~pg~~VLeIGtGsGY~aAl 89 (209)
T PF01135_consen 53 QTISAPSMVARMLEALDLKPGDRVLEIGTGSGYQAAL 89 (209)
T ss_dssp EEE--HHHHHHHHHHTTC-TT-EEEEES-TTSHHHHH
T ss_pred eechHHHHHHHHHHHHhcCCCCEEEEecCCCcHHHHH
Confidence 5567777788888876799999999999999986443
No 272
>PTZ00340 O-sialoglycoprotein endopeptidase-like protein; Provisional
Probab=39.29 E-value=87 Score=31.23 Aligned_cols=53 Identities=15% Similarity=0.215 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCc------HHHHHHHHcCCCCCceeeeeeC
Q 014606 87 TVLFSIVQDLFSKHKINPKSIDILITNCSVSCPTPS------VAAMVINKFGLKSNVRSFHLSG 144 (421)
Q Consensus 87 ~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~------~a~~l~~~LGl~~~~~~~~i~~ 144 (421)
+-....++++|+++|++++|||.|.++..|+. .++ .|.-++..+ +.+.+.+++
T Consensus 51 ~~l~~~i~~~l~~a~~~~~did~Iavt~GPGl-~~~LrVG~~~Ak~LA~a~----~~PligV~H 109 (345)
T PTZ00340 51 EHILSLVKEALEEAKITPSDISLICYTKGPGM-GAPLSVGAVVARTLSLLW----GKPLVGVNH 109 (345)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEecCCCc-HhhHHHHHHHHHHHHHHc----CCCEeecch
Confidence 45567788999999999999999988876663 222 244455544 456777774
No 273
>COG4126 Hydantoin racemase [Amino acid transport and metabolism]
Probab=39.26 E-value=2.4e+02 Score=26.25 Aligned_cols=94 Identities=15% Similarity=0.245 Sum_probs=58.3
Q ss_pred HHHHHHHHHcCCCCceecC--CCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHH
Q 014606 48 EFQTKVLERSGVGNETCLP--CGTHLLPADGSLNSSMEELKTVLFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAA 125 (421)
Q Consensus 48 ~~~~~i~~~~GI~~R~~~~--~~~~~~~~~~s~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~ 125 (421)
..++.+.++.|+.+++... -+... ..++.-.+++..+....+++++++-| -|.|+++|. .+..++.
T Consensus 123 ~il~~lv~~~g~s~~~~~vrstdl~v----L~l~~~~~~~~~~l~~~~~~a~~edg-----AeaIiLGCA---Gms~la~ 190 (230)
T COG4126 123 PILEELVRSYGLSRHCRSVRSTDLPV----LALEGPPEEAEALLVIEAAEALKEDG-----AEAIILGCA---GMSDLAD 190 (230)
T ss_pred HHHHHHHHhcCccccccceeeCCCCc----ccccCChHHHHHHHHHHHHHHhhhcC-----CCEEEEcCc---cHHHHHH
Confidence 3456677778888877621 11110 01111224566788888888888765 578888763 2346789
Q ss_pred HHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHHcc
Q 014606 126 MVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLRVQ 164 (421)
Q Consensus 126 ~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~~g 164 (421)
+|+..+|++ .+| |-..+..+|.+++..+
T Consensus 191 ~Lq~~~gvP----VID-------gv~Aav~~a~~L~~~~ 218 (230)
T COG4126 191 QLQKAFGVP----VID-------GVAAAVKLAEGLLGMG 218 (230)
T ss_pred HHHHHhCCC----ccc-------chHHHHHHHHHHHhhc
Confidence 999999965 222 2345667777777655
No 274
>PTZ00186 heat shock 70 kDa precursor protein; Provisional
Probab=38.54 E-value=1.3e+02 Score=32.83 Aligned_cols=66 Identities=11% Similarity=-0.042 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHH
Q 014606 86 KTVLFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSIS 155 (421)
Q Consensus 86 ~~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~ 155 (421)
.+-....++++|+++|+++++||.|+++.. ..-+|..-..|.+.+|..+ ...++-.-|.+.-.|++
T Consensus 333 ~~r~~~~v~~~L~~a~~~~~dId~VvLVGG-ssriP~V~~~l~~~fg~~~---~~~~nPdeaVA~GAAi~ 398 (657)
T PTZ00186 333 IERSIAPCKQCMKDAGVELKEINDVVLVGG-MTRMPKVVEEVKKFFQKDP---FRGVNPDEAVALGAATL 398 (657)
T ss_pred HHHHHHHHHHHHHHcCCChhhCCEEEEECC-cccChHHHHHHHHHhCCCc---cccCCCchHHHHhHHHH
Confidence 444566788999999999999999998741 1257888899999998642 23444334444444443
No 275
>TIGR03285 methan_mark_14 putative methanogenesis marker protein 14. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=37.86 E-value=73 Score=31.81 Aligned_cols=43 Identities=9% Similarity=0.298 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCccEEEEec--cCCCCCCcH
Q 014606 81 SMEELKTVLFSIVQDLFSKHKINPKSIDILITNC--SVSCPTPSV 123 (421)
Q Consensus 81 ~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s--s~~~~~p~~ 123 (421)
..|...+|......+++++++++.+|+|.|+=+| +-.+..|.-
T Consensus 61 tresV~elV~dtl~e~~k~A~l~i~DL~FVVRSTGV~Agf~spee 105 (445)
T TIGR03285 61 TRESVAELVKDTLKESLKKAGLDIDDLDFVVRSTGVTAGFASPEE 105 (445)
T ss_pred cHHHHHHHHHHHHHHHHHHcCCChhhccEEEeccceeeccCCHHH
Confidence 3466789999999999999999999999988765 335556643
No 276
>PRK00768 nadE NAD synthetase; Reviewed
Probab=37.52 E-value=3.8e+02 Score=25.72 Aligned_cols=32 Identities=9% Similarity=0.088 Sum_probs=23.2
Q ss_pred CcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHH
Q 014606 121 PSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSI 154 (421)
Q Consensus 121 p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al 154 (421)
...|..+++.||+. +...++|. ....++...+
T Consensus 89 ~~da~~la~~lgi~-~~~~i~I~-~~~~~~~~~l 120 (268)
T PRK00768 89 EDDAQDALAFIQPD-RVLTVNIK-PAVDASVAAL 120 (268)
T ss_pred HHHHHHHHHhcCCC-eeEEEECH-HHHHHHHHHH
Confidence 46788999999995 36788888 3666665544
No 277
>PLN03184 chloroplast Hsp70; Provisional
Probab=37.44 E-value=1.2e+02 Score=33.26 Aligned_cols=68 Identities=19% Similarity=0.141 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHH
Q 014606 84 ELKTVLFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSIS 155 (421)
Q Consensus 84 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~ 155 (421)
+..+-..+.++++|+++++++++||.|+++.. ..-+|..-..|...+|.. ....++..-|...-.|++
T Consensus 343 ~l~~r~~~~i~~~L~~a~~~~~dId~ViLvGG-ssriP~V~~~i~~~fg~~---~~~~~npdeaVA~GAAi~ 410 (673)
T PLN03184 343 DLLDRCKTPVENALRDAKLSFKDIDEVILVGG-STRIPAVQELVKKLTGKD---PNVTVNPDEVVALGAAVQ 410 (673)
T ss_pred HHHHHHHHHHHHHHHHcCCChhHccEEEEECC-ccccHHHHHHHHHHhCCC---cccccCcchHHHHHHHHH
Confidence 34455666788999999999999999998741 124788889999999864 234455434444444443
No 278
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=37.01 E-value=84 Score=31.97 Aligned_cols=24 Identities=13% Similarity=0.432 Sum_probs=21.3
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEe
Q 014606 90 FSIVQDLFSKHKINPKSIDILITN 113 (421)
Q Consensus 90 ~~Aa~~aL~~ag~~~~~Id~li~~ 113 (421)
.+++++||+++|++++|||.|-..
T Consensus 284 ~~a~~~Al~~Agi~~~dId~v~~h 307 (410)
T PRK07103 284 MRVIRAALRRAGLGPEDIDYVNPH 307 (410)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEcc
Confidence 589999999999999999987753
No 279
>TIGR01991 HscA Fe-S protein assembly chaperone HscA. The Heat Shock Cognate proteins HscA and HscB act together as chaperones. HscA resembles DnaK but belongs in a separate clade. The apparent function is to aid assembly of iron-sulfur cluster proteins. Homologs from Buchnera and Wolbachia are clearly in the same clade but are highly derived and score lower than some examples of DnaK.
Probab=35.88 E-value=2.2e+02 Score=30.58 Aligned_cols=49 Identities=20% Similarity=0.225 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCC
Q 014606 85 LKTVLFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLK 134 (421)
Q Consensus 85 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~ 134 (421)
..+=..+.++++|+++++.+++||.|+++.. ...+|..-..|.+.+|..
T Consensus 291 ll~~i~~~i~~~L~~a~~~~~~id~ViLvGG-ssriP~V~~~l~~~f~~~ 339 (599)
T TIGR01991 291 LVQKTLSICRRALRDAGLSVEEIKGVVLVGG-STRMPLVRRAVAELFGQE 339 (599)
T ss_pred HHHHHHHHHHHHHHHcCCChhhCCEEEEECC-cCCChHHHHHHHHHhCCC
Confidence 3445567788999999999999999998741 125788889999999865
No 280
>PRK05183 hscA chaperone protein HscA; Provisional
Probab=35.84 E-value=2.1e+02 Score=30.90 Aligned_cols=67 Identities=13% Similarity=0.059 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHH
Q 014606 85 LKTVLFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSIS 155 (421)
Q Consensus 85 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~ 155 (421)
..+=..+.++++|+++++.+++||.|+++.. ..-+|.....|.+.+|..+ ..+++..-|.+.-.|++
T Consensus 307 l~~~~~~~i~~~L~~a~~~~~~i~~ViLvGG-ssriP~v~~~l~~~fg~~~---~~~~npdeaVA~GAAi~ 373 (616)
T PRK05183 307 LVKRTLLACRRALRDAGVEADEVKEVVMVGG-STRVPLVREAVGEFFGRTP---LTSIDPDKVVAIGAAIQ 373 (616)
T ss_pred HHHHHHHHHHHHHHHcCCCcccCCEEEEECC-cccChHHHHHHHHHhccCc---CcCCCchHHHHHHHHHH
Confidence 3444556678999999999999999998741 1247888899999998652 23444334444444443
No 281
>CHL00094 dnaK heat shock protein 70
Probab=35.75 E-value=1.3e+02 Score=32.63 Aligned_cols=48 Identities=19% Similarity=0.234 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCC
Q 014606 86 KTVLFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLK 134 (421)
Q Consensus 86 ~~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~ 134 (421)
.+-....++++|+++++++++||.|+++.. ..-+|..-..|.+.+|..
T Consensus 308 ~~~~~~~i~~~L~~a~~~~~~i~~ViLvGG-ssriP~v~~~l~~~fg~~ 355 (621)
T CHL00094 308 INRCRIPVENALKDAKLDKSDIDEVVLVGG-STRIPAIQELVKKLLGKK 355 (621)
T ss_pred HHHHHHHHHHHHHHcCCChhhCcEEEEECC-ccCChHHHHHHHHHhCCC
Confidence 444566678999999999999999998752 125788889999999864
No 282
>COG3072 CyaA Adenylate cyclase [Nucleotide transport and metabolism]
Probab=34.31 E-value=26 Score=37.20 Aligned_cols=57 Identities=5% Similarity=0.004 Sum_probs=40.5
Q ss_pred cccccEEEecCCCH------------HHHHHHHHHCCCCh-------hhhHHHHHHHh---ccCCCccchHHHHHHHHHH
Q 014606 307 RKAFEHFCVHAGGK------------AVIDAIKENLKLKD-------RDVEASKTTLY---RFGNTSSSSVWYELSYLEA 364 (421)
Q Consensus 307 ~~did~~i~Hq~~~------------~~~~~i~~~lgl~~-------~~~~~s~~~l~---~~Gn~~sasi~i~L~~~~~ 364 (421)
.+|.|.|++|+... ..++.+++.+|+.. .++. -.+.. .-+||||+.-++.|++..+
T Consensus 115 sSDLD~WVCh~~~Ls~~er~~L~rKc~lie~WA~s~gvEvnffL~D~~RFr--~~~~s~~l~gedcGstQh~LLLDEFYR 192 (853)
T COG3072 115 SSDLDIWVCHQDWLSTEERQLLQRKCSLLEDWAASQGVEVNFFLIDENRFR--QHNESGSLGGEDCGSTQHILLLDEFYR 192 (853)
T ss_pred ccccceEEEecccCChhHHHHHHHHHHHHHHHHHHhCceEEEEEecHHhhh--cccccCCCCCcCCcchhhhHHHHHHHH
Confidence 58999999999853 45677888888743 3441 01111 1479999999999999776
Q ss_pred c
Q 014606 365 K 365 (421)
Q Consensus 365 ~ 365 (421)
+
T Consensus 193 S 193 (853)
T COG3072 193 S 193 (853)
T ss_pred H
Confidence 4
No 283
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=33.86 E-value=1.4e+02 Score=30.36 Aligned_cols=43 Identities=7% Similarity=0.106 Sum_probs=29.9
Q ss_pred HHHHHHHHHHhCCCC--CCCccEEEEeccCCCCCCcHHHHHHHHcCCCC
Q 014606 89 LFSIVQDLFSKHKIN--PKSIDILITNCSVSCPTPSVAAMVINKFGLKS 135 (421)
Q Consensus 89 a~~Aa~~aL~~ag~~--~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~ 135 (421)
...|++++++++|++ ++|||.+=+.- .+....-...+.||+.+
T Consensus 268 ~~~aa~~a~~~AGl~~~~~Did~~Ei~D----~Fs~~~l~~~e~lGl~~ 312 (398)
T PRK06157 268 TRIAARKAYREAGITDPREELSMAEVHD----CFSITELVTMEDLGLSE 312 (398)
T ss_pred HHHHHHHHHHHcCCCCchhcCCEEEEec----CChHHHHHHHHHcCCCC
Confidence 567999999999997 79999875431 12333445566777653
No 284
>PF10895 DUF2715: Protein of unknown function (DUF2715); InterPro: IPR024471 This family of proteins with unknown function appears to be restricted to Treponema spp.
Probab=33.85 E-value=23 Score=31.27 Aligned_cols=29 Identities=24% Similarity=0.476 Sum_probs=20.4
Q ss_pred eeeeeeccCCCCCCCcchhhhccCCCCCCC
Q 014606 388 AVWKCISNLRPEKSNVWSEFILRYPMEVPD 417 (421)
Q Consensus 388 ~llr~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (421)
..+|..+..... -+.|++|+++||++.|=
T Consensus 138 ~n~~~~~~~~~~-d~~w~~f~~k~~~~~p~ 166 (176)
T PF10895_consen 138 TNLRFLENGVGS-DLKWANFFLKYCLRVPV 166 (176)
T ss_pred cccccccccccc-cchHHHHhhhcccceeE
Confidence 344555444433 56799999999999983
No 285
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=33.48 E-value=92 Score=24.83 Aligned_cols=71 Identities=15% Similarity=0.157 Sum_probs=37.5
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHHHHc-cCCCe
Q 014606 90 FSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDLLRV-QKNSL 168 (421)
Q Consensus 90 ~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~li~~-g~~~~ 168 (421)
.++.++ |++.| +..++++.++....-..+..+ ..+|++ +..-+ .+++-..+..+++. ...++
T Consensus 20 ~e~l~~-L~~~g-----~~~~~lTNns~~s~~~~~~~L-~~~Gi~--~~~~~--------i~ts~~~~~~~l~~~~~~~~ 82 (101)
T PF13344_consen 20 VEALDA-LRERG-----KPVVFLTNNSSRSREEYAKKL-KKLGIP--VDEDE--------IITSGMAAAEYLKEHKGGKK 82 (101)
T ss_dssp HHHHHH-HHHTT-----SEEEEEES-SSS-HHHHHHHH-HHTTTT----GGG--------EEEHHHHHHHHHHHHTTSSE
T ss_pred HHHHHH-HHHcC-----CCEEEEeCCCCCCHHHHHHHH-HhcCcC--CCcCE--------EEChHHHHHHHHHhcCCCCE
Confidence 444444 45555 444554434333333456666 678986 22222 22345556666666 45799
Q ss_pred EEEEEeccc
Q 014606 169 ALVLSMESV 177 (421)
Q Consensus 169 vLvv~~e~~ 177 (421)
|+|++.+..
T Consensus 83 v~vlG~~~l 91 (101)
T PF13344_consen 83 VYVLGSDGL 91 (101)
T ss_dssp EEEES-HHH
T ss_pred EEEEcCHHH
Confidence 999998753
No 286
>PRK00290 dnaK molecular chaperone DnaK; Provisional
Probab=33.11 E-value=1.6e+02 Score=31.89 Aligned_cols=68 Identities=18% Similarity=0.140 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHH
Q 014606 84 ELKTVLFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSIS 155 (421)
Q Consensus 84 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~ 155 (421)
+..+-..+.++++|+++++.+.+||.|+++.. ..-+|..-..|...+|... ...++..-|.+.-.|+.
T Consensus 304 ~l~~~~~~~i~~~l~~a~~~~~~id~ViLvGG-ssriP~v~~~l~~~fg~~~---~~~~npdeava~GAa~~ 371 (627)
T PRK00290 304 DLVERTIEPCKQALKDAGLSVSDIDEVILVGG-STRMPAVQELVKEFFGKEP---NKGVNPDEVVAIGAAIQ 371 (627)
T ss_pred HHHHHHHHHHHHHHHHcCCChhhCcEEEEECC-cCCChHHHHHHHHHhCCCC---CcCcCChHHHHHhHHHH
Confidence 34455666788999999999999999998752 1247888899999998642 23344344554444544
No 287
>PRK13411 molecular chaperone DnaK; Provisional
Probab=31.79 E-value=1.4e+02 Score=32.47 Aligned_cols=48 Identities=23% Similarity=0.304 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCC
Q 014606 85 LKTVLFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGL 133 (421)
Q Consensus 85 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl 133 (421)
..+-..+.++++|+++++.+++||.|+++.. ...+|..-..|...+|-
T Consensus 306 l~~~~~~~i~~~L~~a~~~~~~id~ViLvGG-ssriP~v~~~l~~~f~~ 353 (653)
T PRK13411 306 LVEATIEPMQQALKDAGLKPEDIDRVILVGG-STRIPAVQEAIQKFFGG 353 (653)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCcEEEEECC-CCCcchHHHHHHHHcCC
Confidence 3444567788999999999999999998741 12478888999999874
No 288
>PF12244 DUF3606: Protein of unknown function (DUF3606); InterPro: IPR022037 This family of proteins is found in bacteria. Proteins in this family are typically between 58 and 85 amino acids in length. There is a single completely conserved residue G that may be functionally important.
Probab=31.73 E-value=46 Score=23.78 Aligned_cols=29 Identities=7% Similarity=0.211 Sum_probs=24.6
Q ss_pred HHHHHHHHHHCCCChhhhHHHHHHHhccCCCc
Q 014606 320 KAVIDAIKENLKLKDRDVEASKTTLYRFGNTS 351 (421)
Q Consensus 320 ~~~~~~i~~~lgl~~~~~~~s~~~l~~~Gn~~ 351 (421)
..-++.|+++||++++++ ..-+...||..
T Consensus 20 ~~ev~ywa~~~gvt~~~L---~~AV~~vG~~~ 48 (57)
T PF12244_consen 20 PYEVRYWAKRFGVTEEQL---REAVRAVGNSR 48 (57)
T ss_pred HHHHHHHHHHHCcCHHHH---HHHHHHHCcCH
Confidence 355789999999999999 47889999974
No 289
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=30.68 E-value=82 Score=31.80 Aligned_cols=43 Identities=16% Similarity=0.209 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHhCCCC--CCCccEEEEeccCCCCCCcHHHHHHHHcCCC
Q 014606 88 VLFSIVQDLFSKHKIN--PKSIDILITNCSVSCPTPSVAAMVINKFGLK 134 (421)
Q Consensus 88 la~~Aa~~aL~~ag~~--~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~ 134 (421)
....|+++|++++|++ ++|||.+=+.. .++...-...+.||+.
T Consensus 256 ~~~~a~~~a~~~Agi~~p~~Did~~el~d----~F~~~~~~~~e~lGl~ 300 (386)
T PRK08313 256 AGRDAAAALWKAAGITDPRDEIDVAEIYV----PFSWFEPMWLENLGFA 300 (386)
T ss_pred HHHHHHHHHHHHcCCCCChhhCCEEEecc----CChHHHHHHHHHcCCC
Confidence 4568999999999997 69999776532 1233344455667765
No 290
>TIGR02350 prok_dnaK chaperone protein DnaK. Members of this family are the chaperone DnaK, of the DnaK-DnaJ-GrpE chaperone system. All members of the seed alignment were taken from completely sequenced bacterial or archaeal genomes and (except for Mycoplasma sequence) found clustered with other genes of this systems. This model excludes DnaK homologs that are not DnaK itself, such as the heat shock cognate protein HscA (TIGR01991). However, it is not designed to distinguish among DnaK paralogs in eukaryotes. Note that a number of dnaK genes have shadow ORFs in the same reverse (relative to dnaK) reading frame, a few of which have been assigned glutamate dehydrogenase activity. The significance of this observation is unclear; lengths of such shadow ORFs are highly variable as if the presumptive protein product is not conserved.
Probab=30.58 E-value=1.6e+02 Score=31.62 Aligned_cols=68 Identities=18% Similarity=0.136 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHH
Q 014606 84 ELKTVLFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSIS 155 (421)
Q Consensus 84 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~ 155 (421)
+..+-..+.++++|+++++.+++||.|+++... .-+|..-..|...+|.. ....++..-|.+.-.|+.
T Consensus 302 ~l~~~~~~~i~~~l~~a~~~~~~i~~V~LvGGs-sriP~v~~~i~~~f~~~---~~~~~~pdeava~GAa~~ 369 (595)
T TIGR02350 302 DLVERTKEPVRQALKDAGLSASDIDEVILVGGS-TRIPAVQELVKDFFGKE---PNKSVNPDEVVAIGAAIQ 369 (595)
T ss_pred HHHHHHHHHHHHHHHHcCCCHhHCcEEEEECCc-ccChHHHHHHHHHhCCc---ccCCcCcHHHHHHHHHHH
Confidence 334555667789999999999999999987521 24788889999999843 223344334444444444
No 291
>PTZ00009 heat shock 70 kDa protein; Provisional
Probab=29.61 E-value=1.8e+02 Score=31.70 Aligned_cols=66 Identities=12% Similarity=0.131 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHH
Q 014606 87 TVLFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSIS 155 (421)
Q Consensus 87 ~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~ 155 (421)
+=..+.++++|+++++++++||.|+++.. ..-+|..-..|...+|-.. ....++..-|.+.-.|++
T Consensus 313 ~~~~~~i~~~L~~a~~~~~~i~~ViLvGG-ssriP~v~~~i~~~f~~~~--~~~~~npdeaVA~GAa~~ 378 (653)
T PTZ00009 313 RNTLQPVEKVLKDAGMDKRSVHEVVLVGG-STRIPKVQSLIKDFFNGKE--PCKSINPDEAVAYGAAVQ 378 (653)
T ss_pred HHHHHHHHHHHHHcCCCHHHCcEEEEECC-CCCChhHHHHHHHHhCCCC--CCCCCCcchHHhhhhhhh
Confidence 33556788999999999999999998741 1247888889999987431 233344334444444554
No 292
>TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade. Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes.
Probab=28.25 E-value=1.4e+02 Score=31.08 Aligned_cols=99 Identities=9% Similarity=-0.093 Sum_probs=53.3
Q ss_pred HHHHHhhhhhcCCCCCCCCCCCCCccccccEEEecCCCH--------HHHHHHHHHCCCChhhhHHHHHHHhccCCCccc
Q 014606 282 WYAVSVTWKKIWPPGRKRGPYIPDFRKAFEHFCVHAGGK--------AVIDAIKENLKLKDRDVEASKTTLYRFGNTSSS 353 (421)
Q Consensus 282 ~~~~~~i~~~l~~~gl~~~~~~~~~~~did~~i~Hq~~~--------~~~~~i~~~lgl~~~~~~~s~~~l~~~Gn~~sa 353 (421)
..++++..+.|.+++++ +++||++++-.-+. ..+..+...+|.+.-.. ++--..|.+.
T Consensus 52 tma~~AA~~lL~~a~id--------~~~Id~Liv~TeS~~d~sps~a~~v~~lL~~lG~~~~~~------fDi~~AC~G~ 117 (454)
T TIGR01833 52 SLCLTVVSKLMERYNID--------YNQIGRLEVGTETIIDKSKSVKTVLMQLFEESGNTDVEG------IDTTNACYGG 117 (454)
T ss_pred HHHHHHHHHHHHHcCCC--------HHHCCEEEEECCCCCCCCCchHHHHHHHHHhcCCCCceE------EeccccchhH
Confidence 33445555667778888 48999999843321 23344444566553322 2223455555
Q ss_pred hHHHHHH-HHHHcCCCCCCCeEEEEee-----c-------ccccccceeeeeecc
Q 014606 354 SVWYELS-YLEAKGKVKKGDKIWQLAF-----G-------SGFKCNSAVWKCISN 395 (421)
Q Consensus 354 si~i~L~-~~~~~g~~~~Gd~vll~~~-----G-------~G~~~~~~llr~~~~ 395 (421)
..-+.++ ..++++ ..++.++|+++. + .|-...++++.-.+.
T Consensus 118 t~AL~~A~~~i~s~-~~~~~~aLVV~sDia~y~~~~~~~t~GaGAvAmLv~~~~~ 171 (454)
T TIGR01833 118 TAALFNAINWIESS-SWDGRYALVVAGDIAVYAKGNARPTGGAGAVAMLIGPNAP 171 (454)
T ss_pred HHHHHHHHHHHHcC-CcCCCeEEEEEeccccccCCCeeeccccceEEEEeccCcc
Confidence 4444444 334444 246777777661 1 133356788875544
No 293
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism]
Probab=28.17 E-value=59 Score=31.02 Aligned_cols=28 Identities=14% Similarity=0.305 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEe
Q 014606 86 KTVLFSIVQDLFSKHKINPKSIDILITN 113 (421)
Q Consensus 86 ~~la~~Aa~~aL~~ag~~~~~Id~li~~ 113 (421)
-+|...|++++.+++|+.|.||+.|-+.
T Consensus 271 fdm~~~aa~~l~aksgltpndvqvielh 298 (408)
T KOG1406|consen 271 FDMTRLAAKRLFAKSGLTPNDVQVIELH 298 (408)
T ss_pred chHHHHHHHHHHHHcCCCcccceEEEee
Confidence 4799999999999999999999987654
No 294
>PF11392 DUF2877: Protein of unknown function (DUF2877); InterPro: IPR021530 This bacterial family of proteins are putative carboxylase proteins however this cannot be confirmed.
Probab=27.61 E-value=1.2e+02 Score=24.70 Aligned_cols=46 Identities=13% Similarity=0.109 Sum_probs=29.5
Q ss_pred CCHHHHHHHHHHCCCChhhhHHHHHHHhccCCCccchHHHHHHHHH
Q 014606 318 GGKAVIDAIKENLKLKDRDVEASKTTLYRFGNTSSSSVWYELSYLE 363 (421)
Q Consensus 318 ~~~~~~~~i~~~lgl~~~~~~~s~~~l~~~Gn~~sasi~i~L~~~~ 363 (421)
.+..+.+.+..-..-+.+.+......+-++||++..|....+...+
T Consensus 64 ~~~~~~~l~~~l~~~~~~~~~~~i~~ll~iGhTSG~D~L~Gi~~~l 109 (110)
T PF11392_consen 64 FSEPLLRLLHALSSGDSEDLEEAIRRLLAIGHTSGADTLLGILLGL 109 (110)
T ss_pred chHHHHHHHHHHHcCCchHHHHHHHHHHHcCCCchHHHHHHHHHHh
Confidence 3444444444433333344444467888899999999999887654
No 295
>PF09887 DUF2114: Uncharacterized protein conserved in archaea (DUF2114); InterPro: IPR008303 There are currently no experimental data for members of this group or their homologues. The exact function of this protein is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=27.58 E-value=1.5e+02 Score=29.82 Aligned_cols=43 Identities=12% Similarity=0.266 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCC-CccEEEEec--cCCCCCCcH
Q 014606 81 SMEELKTVLFSIVQDLFSKHKINPK-SIDILITNC--SVSCPTPSV 123 (421)
Q Consensus 81 ~~~~~~~la~~Aa~~aL~~ag~~~~-~Id~li~~s--s~~~~~p~~ 123 (421)
..|...+|......+++++++++.+ |+|.|+=+| +-.+..|.-
T Consensus 63 TrEsV~elVrdtl~e~~k~A~l~i~~DL~FVVRSTGVvAgf~spee 108 (448)
T PF09887_consen 63 TRESVAELVRDTLLESHKKAHLDIKKDLDFVVRSTGVVAGFDSPEE 108 (448)
T ss_pred cHHHHHHHHHHHHHHHHHHcCCCccccceEEEeecceeeccCCHHH
Confidence 4566789999999999999999988 999988765 335556643
No 296
>PTZ00400 DnaK-type molecular chaperone; Provisional
Probab=26.67 E-value=1.6e+02 Score=32.24 Aligned_cols=47 Identities=13% Similarity=0.164 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCC
Q 014606 87 TVLFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLK 134 (421)
Q Consensus 87 ~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~ 134 (421)
+-....++++|+++|+.+++||.|+++.. ....|..-..|...+|..
T Consensus 348 ~~~~~~i~~~L~~a~~~~~~i~~ViLvGG-ssriP~v~~~l~~~f~~~ 394 (663)
T PTZ00400 348 KKTIEPCEKCIKDAGVKKDELNDVILVGG-MTRMPKVSETVKKIFGKE 394 (663)
T ss_pred HHHHHHHHHHHHHcCCCHHHCcEEEEECC-ccCChHHHHHHHHHhCCC
Confidence 34456678999999999999999998741 125788889999999864
No 297
>COG4401 AroH Chorismate mutase [Amino acid transport and metabolism]
Probab=26.18 E-value=1.9e+02 Score=23.74 Aligned_cols=61 Identities=10% Similarity=0.064 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCCceeeeeeCCcc
Q 014606 85 LKTVLFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSNVRSFHLSGMGC 147 (421)
Q Consensus 85 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C 147 (421)
..+-..+-.+..+++...+|+|+--++++.++|...--.|..+...-|.. +++.+++.. -|
T Consensus 20 I~~at~eLl~~i~~~N~~~pedv~sv~~svT~Dl~A~FPAka~R~~~gw~-~Vpv~~~Qe-m~ 80 (125)
T COG4401 20 ILDATKELLEEIEEENITDPEDVVSVILSVTEDLDAIFPAKAVRELPGWE-YVPVMCMQE-MP 80 (125)
T ss_pred HHHHHHHHHHHHHHhcCCChhheeeEEEEeccchhhhCcHHHhccCCCCc-ccceeeeee-cc
Confidence 33334444455666788999999999988776543222345566666777 788888884 44
No 298
>KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=25.24 E-value=1.8e+02 Score=28.76 Aligned_cols=67 Identities=19% Similarity=0.285 Sum_probs=38.8
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCCceeeeeeC--------CcchHHHHHHHHHHHHH
Q 014606 90 FSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSNVRSFHLSG--------MGCSAGILSISLAKDLL 161 (421)
Q Consensus 90 ~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~~~~~~i~~--------~~C~g~~~al~~A~~li 161 (421)
+-|+.++|+++|++.+|||.-=+.- .+.-.+-...++||+.| ...++++ .||+|.=--..+.+.|-
T Consensus 297 ~laipk~lk~aG~~~sdVd~~EiNE----AFs~v~lA~iK~LgldP--~kVNv~GGAValGHPlG~SGaRi~~tL~~~L~ 370 (396)
T KOG1390|consen 297 ALAIPKALKKAGLEQSDVDYWEINE----AFSVVVLANIKKLGLDP--SKVNVHGGAVALGHPLGMSGARILVTLLHTLE 370 (396)
T ss_pred HHHHHHHHHHcCcchhhhhHHhhhh----hhhHHHHHHHHHhCCCH--hhccCCCceeecCCCcCCcchhHHHHHHHHHH
Confidence 3478899999999999998543321 11123344567888863 2333332 35665544445555544
Q ss_pred H
Q 014606 162 R 162 (421)
Q Consensus 162 ~ 162 (421)
+
T Consensus 371 ~ 371 (396)
T KOG1390|consen 371 Q 371 (396)
T ss_pred h
Confidence 4
No 299
>KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism]
Probab=24.16 E-value=1.5e+02 Score=29.07 Aligned_cols=71 Identities=18% Similarity=0.230 Sum_probs=44.2
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHHcCCCCC-------ceeeeeeCCcchHHHHHHHHHHHHHH
Q 014606 90 FSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINKFGLKSN-------VRSFHLSGMGCSAGILSISLAKDLLR 162 (421)
Q Consensus 90 ~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~LGl~~~-------~~~~~i~~~~C~g~~~al~~A~~li~ 162 (421)
+-|+.++|+.+|+..+|||..=..- .+-+.+-.-.++||+.++ +-++.-- .||+|.=.-..+-..|=+
T Consensus 323 avAIp~alk~aGL~v~did~FEINE----AFAsQ~~yc~~KL~ld~ekVN~~GGaiAlGHP-lGatGAR~VaTlL~emKr 397 (435)
T KOG1389|consen 323 AVAIPKALKAAGLEVDDIDLFEINE----AFASQALYCRNKLGLDPEKVNVNGGAIALGHP-LGATGARCVATLLHEMKR 397 (435)
T ss_pred hhhhHHHHHHcCCcccccceeehhH----HHHHHHHHHHHHhCCCHHHcCCCCceeeccCC-cCCccHhHHHHHHHHHHh
Confidence 3577889999999999999764332 223445566788888632 2233333 477776655555555555
Q ss_pred ccC
Q 014606 163 VQK 165 (421)
Q Consensus 163 ~g~ 165 (421)
.+.
T Consensus 398 rgk 400 (435)
T KOG1389|consen 398 RGK 400 (435)
T ss_pred hcc
Confidence 543
No 300
>PF03702 UPF0075: Uncharacterised protein family (UPF0075); InterPro: IPR005338 Anhydro-N-acetylmuramic acid kinase catalyzes the specific phosphorylation of 1,6-anhydro-N-acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. It is also required for the utilisation of anhMurNAc, either imported from the medium, or derived from its own cell wall murein, and in so doing plays a role in cell wall recycling [, ]. ; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0006040 amino sugar metabolic process, 0009254 peptidoglycan turnover; PDB: 3QBX_B 3QBW_A 3CQY_B.
Probab=23.55 E-value=98 Score=31.12 Aligned_cols=54 Identities=20% Similarity=0.365 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCccEEEEec-c----CCCCCC-----cHHHHHHHHcCCC
Q 014606 81 SMEELKTVLFSIVQDLFSKHKINPKSIDILITNC-S----VSCPTP-----SVAAMVINKFGLK 134 (421)
Q Consensus 81 ~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s-s----~~~~~p-----~~a~~l~~~LGl~ 134 (421)
.+....++-.+|+++.|+++++++++||+|=... + |....+ +....|+++.|++
T Consensus 62 l~~~lg~~~a~av~~~l~~~~i~~~~I~~IgsHGQTv~H~P~~~~~~TlQiG~~~~iA~~tgi~ 125 (364)
T PF03702_consen 62 LDRELGELFADAVNQFLKKNGISPSDIDLIGSHGQTVFHRPEGQHPFTLQIGDPAVIAERTGIT 125 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHCT--GGGEEEEEE--EEEEEECCCTTTEEEEES-HHHHHHHHSS-
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCcccccEEEeCCcceecCcCCCCCceEecCCHHHHHHHHCcC
Confidence 4445567899999999999999999999886543 2 211111 3578999999986
No 301
>COG3473 Maleate cis-trans isomerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=23.15 E-value=3.9e+02 Score=24.77 Aligned_cols=78 Identities=15% Similarity=0.185 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCC--CCCCcHHHHHHHHcCCCCCceeeeeeCCcchHHHHHHHHHHHH
Q 014606 83 EELKTVLFSIVQDLFSKHKINPKSIDILITNCSVS--CPTPSVAAMVINKFGLKSNVRSFHLSGMGCSAGILSISLAKDL 160 (421)
Q Consensus 83 ~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~--~~~p~~a~~l~~~LGl~~~~~~~~i~~~~C~g~~~al~~A~~l 160 (421)
|+...|-..+.+.||+-+. ..+|.|.++|+.. ..-|+....|+.++.-...++++.-+ .+.+.||+.
T Consensus 47 EeL~~M~~~t~~aAl~Lad---a~vdvI~Y~CtsgS~i~G~~~d~ei~~~ie~~~~v~vvTts----~Avv~aL~a---- 115 (238)
T COG3473 47 EELLKMESYTERAALELAD---AGVDVIVYGCTSGSLIGGPGYDKEIAQRIEEAKGVPVVTTS----TAVVEALNA---- 115 (238)
T ss_pred HHHHHHHHHHHHHHHhcCc---cccCEEEEeccceeeecCCchhHHHHHHHHhccCCceeech----HHHHHHHHh----
Confidence 4455677777777776544 4589999977443 33455667777777543345555444 233444432
Q ss_pred HHccCCCeEEEEEe
Q 014606 161 LRVQKNSLALVLSM 174 (421)
Q Consensus 161 i~~g~~~~vLvv~~ 174 (421)
+ ..+++.|++-
T Consensus 116 l---~a~ri~vlTP 126 (238)
T COG3473 116 L---GAQRISVLTP 126 (238)
T ss_pred h---CcceEEEecc
Confidence 1 3577877763
No 302
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=23.11 E-value=1.4e+02 Score=38.01 Aligned_cols=75 Identities=8% Similarity=0.112 Sum_probs=48.6
Q ss_pred HHHHHHHHHhCCCCCCCccEEEE-eccCCCCCCcHHHHHHHHcCCCC----Cceee----eeeCCcchHHHHHHHHHHHH
Q 014606 90 FSIVQDLFSKHKINPKSIDILIT-NCSVSCPTPSVAAMVINKFGLKS----NVRSF----HLSGMGCSAGILSISLAKDL 160 (421)
Q Consensus 90 ~~Aa~~aL~~ag~~~~~Id~li~-~ss~~~~~p~~a~~l~~~LGl~~----~~~~~----~i~~~~C~g~~~al~~A~~l 160 (421)
.++.++||+++|++|++||+|-. +|.+....|.-...|.+.+|-.. .+..- .|.+..+++|+.+|.-+.-.
T Consensus 318 ~~~i~~Al~~Agi~p~~I~yIeaHGTGT~~gD~~E~~Al~~vf~~~~~~~~~~~vgSvKs~iGH~~~AAG~a~lik~~la 397 (2582)
T TIGR02813 318 AKALKRAYDDAGFAPHTCGLIEAHGTGTAAGDVAEFGGLVSVFSQDNDQKQHIALGSVKSQIGHTKSTAGTAGMIKAVLA 397 (2582)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEecCCCCCCCCHHHHHHHHHHhcccccCCCCceeeccccccccchHhHHHHHHHHHHHH
Confidence 68999999999999999998875 34444444555566666665321 12222 33344567777777666666
Q ss_pred HHcc
Q 014606 161 LRVQ 164 (421)
Q Consensus 161 i~~g 164 (421)
++.+
T Consensus 398 l~~~ 401 (2582)
T TIGR02813 398 LHHK 401 (2582)
T ss_pred HhcC
Confidence 6665
No 303
>PF06924 DUF1281: Protein of unknown function (DUF1281); InterPro: IPR009694 This family consists of several hypothetical enterobacterial proteins of around 170 residues in length. Members of this family are found in Escherichia coli, Salmonella typhimurium and Shigella species. The function of this family is unknown.; PDB: 2IJR_A.
Probab=22.25 E-value=30 Score=29.25 Aligned_cols=47 Identities=9% Similarity=0.126 Sum_probs=26.6
Q ss_pred eeeecCCCCCccCHHHHHHHHHHcCCCChHHHHHHHHHHHHcCCCCceec
Q 014606 16 FICYKAPESLRAPISAFIEHTERSGTFDSKAVEFQTKVLERSGVGNETCL 65 (421)
Q Consensus 16 ~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~ 65 (421)
+|...|++ +--+.....+.+...++++..+.++++...+||..|+|-
T Consensus 63 ~G~~s~~N---~AF~~Wl~lL~~~~~Ld~~~~~~i~~l~~QSGi~~~~We 109 (134)
T PF06924_consen 63 TGASSPAN---QAFTQWLGLLQKDVWLDPETCRRIHRLWLQSGIGARRWE 109 (134)
T ss_dssp ---S-HHH---HHHHHHHHHHHTT-B-SSHHHHHHHHHHHTT-GGG--TT
T ss_pred CCCCCccc---ccHHHHHHHHHhCCcCCHHHHHHHHHHHHHcCccccccc
Confidence 34444444 333445555555445788888889999999999999984
No 304
>COG2377 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases [Posttranslational modification, protein turnover, chaperones]
Probab=22.12 E-value=1.8e+02 Score=29.19 Aligned_cols=64 Identities=11% Similarity=0.144 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCC----------CCcHHHHHHHHcCCCC--Cceeeeee
Q 014606 80 SSMEELKTVLFSIVQDLFSKHKINPKSIDILITNCSVSCP----------TPSVAAMVINKFGLKS--NVRSFHLS 143 (421)
Q Consensus 80 ~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~----------~p~~a~~l~~~LGl~~--~~~~~~i~ 143 (421)
..+++...+-++|++.+|++.++.+++|+.|.+-.-+-.. .-..+..++.++|++. +...=|+.
T Consensus 66 ~l~~~l~~~~a~av~~ll~~~~l~~~~i~~iG~HGQTV~H~p~~~~~~t~Qlgd~~~iA~~TGi~~v~dfR~~D~a 141 (371)
T COG2377 66 ELDRALALLHAQAVAALLAEQGLLPRDIRAIGCHGQTVLHRPPGHAPDTVQLGDGPLIAELTGITVVGDFRRRDMA 141 (371)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHhCceeecCCccccCCCCCCCCceeecCchHHHHHHhCCccHhhhcccccc
Confidence 4556667888999999999999999999977664322111 1235789999999872 23444555
No 305
>KOG1392 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=21.58 E-value=60 Score=31.30 Aligned_cols=96 Identities=14% Similarity=0.085 Sum_probs=52.0
Q ss_pred hhhhhcCCCCCCCCCCCCCccccccEEEecCC-CHHHHHH--------HHH-------HCCCC-hhhhHHHHHHHhccCC
Q 014606 287 VTWKKIWPPGRKRGPYIPDFRKAFEHFCVHAG-GKAVIDA--------IKE-------NLKLK-DRDVEASKTTLYRFGN 349 (421)
Q Consensus 287 ~i~~~l~~~gl~~~~~~~~~~~did~~i~Hq~-~~~~~~~--------i~~-------~lgl~-~~~~~~s~~~l~~~Gn 349 (421)
.+|+.|.++|++ ..|||-|-+|.+ ..+++.+ +++ +.|.| .+|+.. |.---.+||
T Consensus 349 ~ipkll~kaglt--------lkdid~feiheafagqilanlkamdsdwfck~ymgr~~kvg~ppl~k~nn-wggslsigh 419 (465)
T KOG1392|consen 349 VIPKLLDKAGLT--------LKDIDVFEIHEAFAGQILANLKAMDSDWFCKEYMGRSGKVGRPPLDKLNN-WGGSLSIGH 419 (465)
T ss_pred ccHHHHHHcCCc--------ccccchhhhHHHHhHHHHhhhhhhcchHHHHHHhcccCccCCCChHHhcc-cCcceecCC
Confidence 466778899998 599999999975 2333322 222 34544 344421 222233677
Q ss_pred Cccch-HHHHHHHHHHcCCCCCCCeEEEEeecccccccceeeee
Q 014606 350 TSSSS-VWYELSYLEAKGKVKKGDKIWQLAFGSGFKCNSAVWKC 392 (421)
Q Consensus 350 ~~sas-i~i~L~~~~~~g~~~~Gd~vll~~~G~G~~~~~~llr~ 392 (421)
.+.|+ +-+.++.+-+- +-..|+..++.+-.+|..--+++++.
T Consensus 420 pfgatgvrl~mh~anrl-~~e~gqygvvaacaaggqgvamliea 462 (465)
T KOG1392|consen 420 PFGATGVRLAMHSANRL-KEEKGQYGVVAACAAGGQGVAMLIEA 462 (465)
T ss_pred cccccchhhHHHHHhHH-HhhcCceeEeehhhcCCcceEEEeec
Confidence 66654 33333333221 12357777766655555445566553
No 306
>PRK09450 cyaA adenylate cyclase; Provisional
Probab=21.50 E-value=1.4e+02 Score=33.54 Aligned_cols=55 Identities=9% Similarity=0.134 Sum_probs=40.3
Q ss_pred cccccEEEecCCCH------------HHHHHHHHHCCC-------ChhhhHHHHHHHhccC------CCccchHHHHHHH
Q 014606 307 RKAFEHFCVHAGGK------------AVIDAIKENLKL-------KDRDVEASKTTLYRFG------NTSSSSVWYELSY 361 (421)
Q Consensus 307 ~~did~~i~Hq~~~------------~~~~~i~~~lgl-------~~~~~~~s~~~l~~~G------n~~sasi~i~L~~ 361 (421)
.+|+|.|++|+.+. ..+..+++.+|+ +++++. . .++| |||||--.+.|++
T Consensus 112 ~SDlDiWvCh~~~L~~~~~~~L~~K~~li~~WA~~~gvEv~FFLmd~~~Fr---~--~~~~~~l~~E~cGSaQh~LLLDE 186 (830)
T PRK09450 112 SSDLDIWVCHRPWLDAEERQLLQRKCSLLEQWAASLGVEVNFFLMDEERFR---H--NESGSALGGEDCGSTQHILLLDE 186 (830)
T ss_pred CCCCeEEEECCCCCCHHHHHHHHHHHHHHHHHHHHcCCEEEEEEECHHHhh---c--ccccccCCCCCChHHHHHHHHHH
Confidence 58999999999753 455668888887 455652 2 2234 4999999999999
Q ss_pred HHHcC
Q 014606 362 LEAKG 366 (421)
Q Consensus 362 ~~~~g 366 (421)
..+..
T Consensus 187 FYRTa 191 (830)
T PRK09450 187 FYRTA 191 (830)
T ss_pred HHHHh
Confidence 88753
No 307
>PRK00061 ribH 6,7-dimethyl-8-ribityllumazine synthase; Provisional
Probab=20.94 E-value=49 Score=28.91 Aligned_cols=48 Identities=15% Similarity=0.221 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCcHHHHHHHH
Q 014606 81 SMEELKTVLFSIVQDLFSKHKINPKSIDILITNCSVSCPTPSVAAMVINK 130 (421)
Q Consensus 81 ~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~ss~~~~~p~~a~~l~~~ 130 (421)
|.++..+...+.+.+.|++.|++.++|+.+-+.. -+-.|-.+.++++.
T Consensus 22 ~n~~i~~~l~~ga~~~l~~~gv~~~~i~v~~VPG--a~EiP~a~~~l~~~ 69 (154)
T PRK00061 22 FNDFITDALLEGALDALKRHGVSEENIDVVRVPG--AFEIPLAAKKLAES 69 (154)
T ss_pred CcHHHHHHHHHHHHHHHHHcCCCccceEEEECCC--HHHHHHHHHHHHHc
Confidence 4456678889999999999999888888665433 23466666677654
No 308
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=20.89 E-value=72 Score=29.39 Aligned_cols=34 Identities=21% Similarity=0.322 Sum_probs=25.3
Q ss_pred chHHHHHHHHHHcCCCCCCCeEEEEeeccccccc
Q 014606 353 SSVWYELSYLEAKGKVKKGDKIWQLAFGSGFKCN 386 (421)
Q Consensus 353 asi~i~L~~~~~~g~~~~Gd~vll~~~G~G~~~~ 386 (421)
-|-|...+.+++.=.+++|++||=+|-|+|+..+
T Consensus 55 is~P~~vA~m~~~L~~~~g~~VLEIGtGsGY~aA 88 (209)
T COG2518 55 ISAPHMVARMLQLLELKPGDRVLEIGTGSGYQAA 88 (209)
T ss_pred ecCcHHHHHHHHHhCCCCCCeEEEECCCchHHHH
Confidence 3445555556665578999999999999998644
No 309
>PRK07591 threonine synthase; Validated
Probab=20.87 E-value=1.3e+02 Score=30.81 Aligned_cols=71 Identities=20% Similarity=0.179 Sum_probs=46.8
Q ss_pred HHHHHHHHH----HCCCChhhhHHHHHHHhc-cCCC---ccchHHHHHHHHHHcCCCCCCCeEEEEeecccccccceee
Q 014606 320 KAVIDAIKE----NLKLKDRDVEASKTTLYR-FGNT---SSSSVWYELSYLEAKGKVKKGDKIWQLAFGSGFKCNSAVW 390 (421)
Q Consensus 320 ~~~~~~i~~----~lgl~~~~~~~s~~~l~~-~Gn~---~sasi~i~L~~~~~~g~~~~Gd~vll~~~G~G~~~~~~ll 390 (421)
...++.+.+ ...++.+.+......+.+ .|=. +++..+..+.++.++|.+.++++|+++--|.|+..-..+.
T Consensus 320 ~~~~~~i~~~~g~~v~Vsd~ei~~a~~~la~~eGi~~epssaaalAal~~l~~~g~i~~~~~VV~i~tG~G~kd~~~~~ 398 (421)
T PRK07591 320 PYALDIARRTGGAIEDVTDEEIIEGIKLLARTEGIFTETAGGVTVAVLKKLVEAGKIDPDEETVVYITGNGLKTLEAVA 398 (421)
T ss_pred HHHHHHHHHhCCEEEEECHHHHHHHHHHHHhcCCeeecchHHHHHHHHHHHHHhCCCCCCCeEEEEeCCCccCCHHHHH
Confidence 345555554 345676666433334433 4433 6677777888888889999999999999998876544443
No 310
>PF09663 Amido_AtzD_TrzD: Amidohydrolase ring-opening protein (Amido_AtzD_TrzD); InterPro: IPR014086 Members of this family are ring-opening amidohydrolases, including cyanuric acid amidohydrolase (3.5.2.15 from EC) (AtzD and TrzD) and barbiturase. Note that barbiturase does not act as defined for 3.5.2.1 from EC (barbiturate + water = malonate + urea) but rather catalyses the ring opening of barbiturase acid to ureidomalonic acid [].; GO: 0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
Probab=20.82 E-value=3.2e+02 Score=27.21 Aligned_cols=29 Identities=14% Similarity=0.362 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHhCCC-CCCCccEEEEec
Q 014606 86 KTVLFSIVQDLFSKHKI-NPKSIDILITNC 114 (421)
Q Consensus 86 ~~la~~Aa~~aL~~ag~-~~~~Id~li~~s 114 (421)
++..++|++++++++|+ +|.|+-+|-+=|
T Consensus 131 V~~vA~aV~~aM~~AGI~dpaDVH~VQvKc 160 (365)
T PF09663_consen 131 VEEVAAAVRAAMADAGITDPADVHFVQVKC 160 (365)
T ss_pred HHHHHHHHHHHHHHcCCCChhheeeEEecC
Confidence 67889999999999999 788876665434
No 311
>cd03765 proteasome_beta_bacterial Bacterial proteasome, beta subunit. The 20S proteasome, multisubunit proteolytic complex, is the central enzyme of nonlysosomal protein degradation in both the cytosol and nucleus. It is composed of 28 subunits arranged as four homoheptameric rings that stack on top of one another forming an elongated alpha-beta-beta-alpha cylinder with a central cavity. The proteasome alpha and beta subunits are members of the N-terminal nucleophile (Ntn)-hydrolase superfamily. Their N-terminal threonine residues are exposed as a nucleophile in peptide bond hydrolysis. Mammals have 7 alpha and 7 beta proteasome subunits while archaea have one of each.
Probab=20.52 E-value=1.5e+02 Score=27.73 Aligned_cols=33 Identities=9% Similarity=0.167 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCccEEEEec
Q 014606 82 MEELKTVLFSIVQDLFSKHKINPKSIDILITNC 114 (421)
Q Consensus 82 ~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s 114 (421)
.+++.+++.+|.+.++++-..+...|+..++..
T Consensus 167 ~eeai~la~~al~~a~~rd~~sg~~iev~vI~k 199 (236)
T cd03765 167 LEDAAKCALVSMDSTMRSNLSVGPPLDLLVYER 199 (236)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCEEEEEEEC
Confidence 467999999999999999999999999888853
No 312
>KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=20.42 E-value=1.8e+02 Score=27.77 Aligned_cols=42 Identities=17% Similarity=0.082 Sum_probs=33.5
Q ss_pred hhhcCCCCCCCCCCCCCccccccEEEecCCCHHHHHHHHHHCCCChhhhH
Q 014606 289 WKKIWPPGRKRGPYIPDFRKAFEHFCVHAGGKAVIDAIKENLKLKDRDVE 338 (421)
Q Consensus 289 ~~~l~~~gl~~~~~~~~~~~did~~i~Hq~~~~~~~~i~~~lgl~~~~~~ 338 (421)
...|+++|++ ..|||.+-.+.+-..-.-.+.+.|+++.+|+.
T Consensus 300 ~~vLKksGlk--------l~DiDl~EvNEAFApQ~LAv~r~L~ld~sKlN 341 (396)
T KOG1391|consen 300 SGVLKKSGLK--------LKDIDLVEVNEAFAPQYLAVERSLDLDISKLN 341 (396)
T ss_pred HHHHHHcCCc--------ccccceEEechhhchHHHHHHHhhCCChhhcc
Confidence 3556778988 59999998887766666678899999999873
Done!