Query 014608
Match_columns 421
No_of_seqs 328 out of 1637
Neff 8.1
Searched_HMMs 46136
Date Fri Mar 29 06:47:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014608.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014608hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02382 probable sucrose-phos 100.0 7E-101 2E-105 774.0 49.2 411 1-411 1-413 (413)
2 PF08472 S6PP_C: Sucrose-6-pho 100.0 5E-52 1.1E-56 341.6 13.7 133 262-394 1-133 (133)
3 PF05116 S6PP: Sucrose-6F-phos 100.0 1.1E-41 2.5E-46 322.5 22.6 247 8-261 1-247 (247)
4 TIGR01485 SPP_plant-cyano sucr 100.0 8.1E-39 1.7E-43 304.0 29.1 247 9-261 1-248 (249)
5 PRK10513 sugar phosphate phosp 100.0 1.9E-36 4.2E-41 290.8 24.0 235 8-261 2-269 (270)
6 PRK15126 thiamin pyrimidine py 100.0 2E-36 4.2E-41 291.3 21.9 236 9-266 2-268 (272)
7 PRK10976 putative hydrolase; P 100.0 4.2E-36 9.2E-41 287.9 21.5 232 9-261 2-265 (266)
8 TIGR02471 sucr_syn_bact_C sucr 100.0 3.6E-35 7.7E-40 276.7 24.5 236 11-261 1-236 (236)
9 COG0561 Cof Predicted hydrolas 100.0 1.7E-35 3.6E-40 283.5 22.1 236 7-262 1-263 (264)
10 PRK01158 phosphoglycolate phos 100.0 5.9E-34 1.3E-38 267.0 22.3 224 8-261 2-230 (230)
11 TIGR01482 SPP-subfamily Sucros 100.0 2.9E-33 6.3E-38 261.3 19.4 221 12-260 1-225 (225)
12 PLN02887 hydrolase family prot 100.0 3.4E-33 7.3E-38 290.5 21.5 237 6-261 305-580 (580)
13 PF08282 Hydrolase_3: haloacid 100.0 4.4E-33 9.6E-38 262.4 18.6 224 12-256 1-254 (254)
14 PRK10530 pyridoxal phosphate ( 100.0 4.3E-33 9.3E-38 267.6 18.3 232 8-261 2-272 (272)
15 COG4460 Uncharacterized protei 100.0 1.1E-33 2.5E-38 222.5 9.9 121 285-410 7-129 (130)
16 PRK03669 mannosyl-3-phosphogly 100.0 1E-31 2.3E-36 258.3 17.8 231 6-260 4-268 (271)
17 TIGR01487 SPP-like sucrose-pho 100.0 8.2E-31 1.8E-35 243.5 19.8 213 9-256 1-215 (215)
18 TIGR00099 Cof-subfamily Cof su 100.0 1.8E-30 3.9E-35 247.6 19.7 224 11-256 1-256 (256)
19 TIGR01486 HAD-SF-IIB-MPGP mann 100.0 1.5E-29 3.3E-34 241.3 18.0 224 11-260 1-256 (256)
20 PRK00192 mannosyl-3-phosphogly 100.0 6.8E-29 1.5E-33 239.0 17.7 230 8-260 3-270 (273)
21 PTZ00174 phosphomannomutase; P 100.0 1.7E-27 3.8E-32 225.9 19.7 216 6-235 2-245 (247)
22 PRK14502 bifunctional mannosyl 99.9 1.2E-24 2.5E-29 226.0 20.9 234 5-261 412-691 (694)
23 TIGR01484 HAD-SF-IIB HAD-super 99.9 1.1E-24 2.4E-29 200.5 18.7 197 11-220 1-204 (204)
24 TIGR02463 MPGP_rel mannosyl-3- 99.9 9.4E-25 2E-29 203.6 16.3 197 11-221 1-221 (221)
25 PRK10187 trehalose-6-phosphate 99.9 1.2E-23 2.6E-28 201.5 19.9 219 9-260 14-244 (266)
26 PRK12702 mannosyl-3-phosphogly 99.9 2.3E-23 5.1E-28 197.0 19.0 238 9-261 1-295 (302)
27 TIGR02468 sucrsPsyn_pln sucros 99.9 1.4E-21 2.9E-26 212.3 23.3 239 9-259 770-1049(1050)
28 TIGR02461 osmo_MPG_phos mannos 99.9 1.7E-22 3.8E-27 188.8 13.8 193 11-221 1-225 (225)
29 PLN02423 phosphomannomutase 99.9 6.2E-22 1.4E-26 187.4 16.8 206 9-230 7-240 (245)
30 PRK14501 putative bifunctional 99.9 1E-20 2.3E-25 205.0 19.3 221 4-260 487-724 (726)
31 TIGR00685 T6PP trehalose-phosp 99.9 1.9E-20 4.2E-25 177.3 17.7 224 8-259 2-242 (244)
32 PLN02580 trehalose-phosphatase 99.8 9.3E-19 2E-23 173.2 19.7 227 4-259 114-376 (384)
33 PLN02205 alpha,alpha-trehalose 99.8 2.5E-18 5.4E-23 187.1 20.8 233 5-260 592-845 (854)
34 COG3769 Predicted hydrolase (H 99.8 1.4E-17 3E-22 148.7 17.2 238 8-261 6-272 (274)
35 PLN03017 trehalose-phosphatase 99.8 2.2E-17 4.8E-22 162.1 20.3 223 7-260 109-359 (366)
36 PLN02151 trehalose-phosphatase 99.7 1.5E-15 3.3E-20 148.8 20.5 223 7-260 96-345 (354)
37 TIGR02726 phenyl_P_delta pheny 99.7 3.9E-16 8.5E-21 139.0 9.4 75 175-262 82-156 (169)
38 TIGR01670 YrbI-phosphatas 3-de 99.6 4E-15 8.7E-20 131.0 10.6 75 175-261 76-150 (154)
39 PF02358 Trehalose_PPase: Treh 99.6 8.4E-15 1.8E-19 138.0 13.3 194 13-224 1-219 (235)
40 COG1877 OtsB Trehalose-6-phosp 99.6 3.5E-13 7.6E-18 127.5 19.2 196 4-214 13-218 (266)
41 PRK09484 3-deoxy-D-manno-octul 99.5 2E-14 4.4E-19 130.1 9.5 74 175-261 96-169 (183)
42 PLN03063 alpha,alpha-trehalose 99.5 5.8E-13 1.2E-17 145.2 20.0 197 4-214 502-721 (797)
43 PLN03064 alpha,alpha-trehalose 99.5 5.5E-13 1.2E-17 145.3 19.0 197 4-214 586-811 (934)
44 PRK11133 serB phosphoserine ph 99.5 3.6E-13 7.7E-18 132.1 12.8 72 173-258 246-317 (322)
45 COG1778 Low specificity phosph 99.4 2.8E-13 6.1E-18 115.4 8.8 60 175-238 83-142 (170)
46 KOG3189 Phosphomannomutase [Li 99.3 4.5E-11 9.8E-16 105.6 14.0 210 6-230 8-246 (252)
47 COG0560 SerB Phosphoserine pho 99.2 6E-10 1.3E-14 103.1 15.2 103 124-234 90-198 (212)
48 cd01427 HAD_like Haloacid deha 99.1 4.1E-10 9E-15 95.0 9.6 132 11-220 1-139 (139)
49 COG0546 Gph Predicted phosphat 99.1 8.8E-11 1.9E-15 109.5 3.9 101 113-223 90-191 (220)
50 PF03332 PMM: Eukaryotic phosp 99.0 1.3E-09 2.9E-14 99.2 10.2 182 40-231 7-216 (220)
51 TIGR00338 serB phosphoserine p 99.0 1.2E-08 2.5E-13 94.8 14.8 59 174-237 151-209 (219)
52 TIGR01457 HAD-SF-IIA-hyp2 HAD- 99.0 2.1E-08 4.5E-13 95.3 16.2 195 9-224 1-226 (249)
53 PRK13288 pyrophosphatase PpaX; 98.9 1.6E-09 3.4E-14 100.4 7.0 53 168-223 132-184 (214)
54 PRK13223 phosphoglycolate phos 98.9 8.7E-10 1.9E-14 106.1 4.3 52 169-223 152-203 (272)
55 PRK10826 2-deoxyglucose-6-phos 98.9 1.9E-09 4.2E-14 100.4 5.4 90 124-223 105-194 (222)
56 TIGR01491 HAD-SF-IB-PSPlk HAD- 98.8 3.8E-08 8.2E-13 89.8 12.3 53 174-231 146-198 (201)
57 PRK13226 phosphoglycolate phos 98.8 3.8E-09 8.3E-14 99.0 4.2 50 171-223 148-197 (229)
58 PRK10444 UMP phosphatase; Prov 98.8 9.9E-08 2.2E-12 90.5 13.1 50 172-224 172-222 (248)
59 KOG1050 Trehalose-6-phosphate 98.8 1.4E-07 3.1E-12 100.8 15.5 192 3-213 497-692 (732)
60 PRK10725 fructose-1-P/6-phosph 98.8 1.5E-08 3.3E-13 91.6 6.9 48 171-221 139-186 (188)
61 TIGR01452 PGP_euk phosphoglyco 98.7 1.4E-07 3.1E-12 91.1 13.8 48 173-223 201-249 (279)
62 PRK11590 hypothetical protein; 98.7 2E-07 4.3E-12 86.3 13.7 51 174-229 159-209 (211)
63 PRK13222 phosphoglycolate phos 98.7 6.8E-09 1.5E-13 96.6 3.7 49 172-223 147-195 (226)
64 TIGR01458 HAD-SF-IIA-hyp3 HAD- 98.7 6E-08 1.3E-12 92.6 10.0 48 173-223 178-226 (257)
65 TIGR01422 phosphonatase phosph 98.7 1.1E-07 2.3E-12 90.5 11.5 91 124-223 112-203 (253)
66 PLN02770 haloacid dehalogenase 98.7 3.2E-08 6.8E-13 94.0 7.4 87 124-222 121-209 (248)
67 TIGR02137 HSK-PSP phosphoserin 98.7 2.4E-08 5.1E-13 91.9 6.1 55 172-235 129-183 (203)
68 PRK13225 phosphoglycolate phos 98.7 1.5E-07 3.2E-12 90.7 11.6 46 175-223 196-241 (273)
69 PRK13478 phosphonoacetaldehyde 98.7 1.6E-07 3.4E-12 90.2 11.7 91 124-223 114-205 (267)
70 TIGR01662 HAD-SF-IIIA HAD-supe 98.7 2.6E-07 5.7E-12 78.7 11.2 44 174-220 85-130 (132)
71 PLN02575 haloacid dehalogenase 98.7 1.8E-08 3.8E-13 100.5 4.5 91 124-224 229-319 (381)
72 PLN03243 haloacid dehalogenase 98.7 1.8E-08 3.8E-13 96.4 4.2 89 125-223 123-211 (260)
73 TIGR01449 PGP_bact 2-phosphogl 98.6 1.5E-08 3.3E-13 93.4 3.2 48 171-221 138-185 (213)
74 PRK11587 putative phosphatase; 98.6 6.6E-08 1.4E-12 89.9 7.2 50 172-224 136-185 (218)
75 smart00775 LNS2 LNS2 domain. T 98.6 7.4E-08 1.6E-12 85.0 6.9 71 11-83 1-88 (157)
76 PLN02779 haloacid dehalogenase 98.6 5.1E-07 1.1E-11 87.6 12.3 50 171-223 199-248 (286)
77 PRK14988 GMP/IMP nucleotidase; 98.6 1.9E-07 4.2E-12 87.2 8.9 54 170-226 145-199 (224)
78 TIGR01488 HAD-SF-IB Haloacid D 98.6 1.3E-07 2.9E-12 84.4 7.2 41 170-213 137-177 (177)
79 TIGR01454 AHBA_synth_RP 3-amin 98.6 7E-08 1.5E-12 88.7 5.5 49 172-223 129-177 (205)
80 TIGR03351 PhnX-like phosphonat 98.6 1.5E-07 3.2E-12 87.4 7.6 48 172-222 143-192 (220)
81 PRK13582 thrH phosphoserine ph 98.6 9.1E-08 2E-12 87.8 5.7 44 180-228 133-176 (205)
82 TIGR02253 CTE7 HAD superfamily 98.5 1.2E-07 2.7E-12 87.9 6.2 50 172-224 148-198 (221)
83 TIGR01656 Histidinol-ppas hist 98.5 3.7E-07 7.9E-12 79.6 8.6 46 173-221 100-145 (147)
84 TIGR02009 PGMB-YQAB-SF beta-ph 98.5 8.9E-08 1.9E-12 86.2 4.7 47 171-220 139-185 (185)
85 PLN02645 phosphoglycolate phos 98.5 5.1E-06 1.1E-10 81.6 17.4 49 173-224 229-278 (311)
86 PLN02954 phosphoserine phospha 98.5 7.7E-07 1.7E-11 82.8 9.9 38 172-214 152-189 (224)
87 TIGR01990 bPGM beta-phosphoglu 98.5 4.8E-07 1E-11 81.4 8.1 48 171-221 138-185 (185)
88 TIGR01684 viral_ppase viral ph 98.4 7E-07 1.5E-11 85.3 8.7 75 8-82 125-199 (301)
89 PRK08942 D,D-heptose 1,7-bisph 98.4 2.3E-06 5E-11 77.2 11.2 49 172-223 101-149 (181)
90 TIGR01664 DNA-3'-Pase DNA 3'-p 98.4 3E-06 6.4E-11 75.5 11.5 39 174-215 108-156 (166)
91 TIGR01681 HAD-SF-IIIC HAD-supe 98.4 2.2E-06 4.8E-11 72.9 10.0 34 175-211 90-125 (128)
92 PLN02940 riboflavin kinase 98.4 1.1E-06 2.3E-11 88.8 9.2 51 171-224 147-197 (382)
93 TIGR00213 GmhB_yaeD D,D-heptos 98.4 2.8E-06 6.1E-11 76.3 11.0 49 172-223 104-153 (176)
94 TIGR02252 DREG-2 REG-2-like, H 98.4 1.3E-06 2.7E-11 80.1 8.0 42 173-217 159-201 (203)
95 TIGR01428 HAD_type_II 2-haloal 98.3 9.1E-07 2E-11 80.8 6.7 49 171-222 145-193 (198)
96 TIGR01261 hisB_Nterm histidino 98.3 1.9E-06 4.1E-11 76.3 8.2 49 173-224 102-150 (161)
97 PHA02597 30.2 hypothetical pro 98.3 1.6E-06 3.4E-11 79.1 7.7 47 174-225 130-178 (197)
98 TIGR01689 EcbF-BcbF capsule bi 98.3 3E-06 6.6E-11 71.6 8.2 48 10-58 2-53 (126)
99 PRK10563 6-phosphogluconate ph 98.3 1.4E-06 2.9E-11 81.0 6.0 47 172-221 140-186 (221)
100 TIGR01993 Pyr-5-nucltdase pyri 98.3 2E-06 4.3E-11 77.6 6.9 43 174-219 141-183 (184)
101 PRK06769 hypothetical protein; 98.2 5.8E-06 1.3E-10 74.1 9.3 49 172-223 91-139 (173)
102 TIGR01459 HAD-SF-IIA-hyp4 HAD- 98.2 5.8E-05 1.3E-09 71.3 16.2 47 171-220 192-240 (242)
103 TIGR01549 HAD-SF-IA-v1 haloaci 98.2 7.5E-06 1.6E-10 71.4 9.3 38 173-214 117-154 (154)
104 PHA03398 viral phosphatase sup 98.2 5.1E-06 1.1E-10 79.5 8.5 76 8-83 127-202 (303)
105 PRK09552 mtnX 2-hydroxy-3-keto 98.2 1.5E-05 3.2E-10 74.2 11.3 37 175-219 148-184 (219)
106 PRK06698 bifunctional 5'-methy 98.2 1.1E-06 2.3E-11 91.1 3.7 45 174-223 385-429 (459)
107 PRK08238 hypothetical protein; 98.2 3E-05 6.5E-10 80.3 14.0 37 195-233 140-176 (479)
108 TIGR01548 HAD-SF-IA-hyp1 haloa 98.2 1.3E-06 2.8E-11 79.8 3.3 36 174-212 161-196 (197)
109 PRK09449 dUMP phosphatase; Pro 98.1 2.5E-06 5.3E-11 79.4 5.0 46 173-221 149-196 (224)
110 COG0637 Predicted phosphatase/ 98.1 4.1E-06 8.9E-11 78.2 6.4 53 170-225 138-190 (221)
111 TIGR01460 HAD-SF-IIA Haloacid 98.1 0.00011 2.5E-09 69.1 16.1 47 172-221 186-234 (236)
112 TIGR01668 YqeG_hyp_ppase HAD s 98.1 3E-05 6.6E-10 69.3 11.5 49 174-225 91-140 (170)
113 PRK05446 imidazole glycerol-ph 98.1 3.1E-05 6.7E-10 76.9 12.3 48 172-222 102-149 (354)
114 TIGR01545 YfhB_g-proteo haloac 98.1 1.6E-05 3.4E-10 73.6 9.5 46 180-230 164-209 (210)
115 PHA02530 pseT polynucleotide k 98.1 1.7E-05 3.6E-10 77.4 9.4 48 173-223 250-298 (300)
116 PRK11009 aphA acid phosphatase 98.0 9.6E-05 2.1E-09 69.5 13.1 28 197-224 187-214 (237)
117 PRK10748 flavin mononucleotide 98.0 9.5E-06 2.1E-10 76.5 6.4 51 172-225 161-212 (238)
118 TIGR02247 HAD-1A3-hyp Epoxide 98.0 4.3E-05 9.3E-10 70.4 10.6 54 173-229 151-204 (211)
119 TIGR01525 ATPase-IB_hvy heavy 98.0 2.4E-05 5.3E-10 82.9 9.2 55 193-257 446-500 (556)
120 TIGR01685 MDP-1 magnesium-depe 98.0 8.6E-05 1.9E-09 66.5 11.1 34 191-224 127-160 (174)
121 TIGR02254 YjjG/YfnB HAD superf 97.9 1.6E-05 3.6E-10 73.6 6.5 48 173-222 151-199 (224)
122 PRK09456 ?-D-glucose-1-phospha 97.9 3.1E-05 6.8E-10 70.8 8.3 53 169-224 136-188 (199)
123 PLN02919 haloacid dehalogenase 97.9 2.8E-05 6.1E-10 88.0 8.8 89 123-223 173-264 (1057)
124 TIGR03333 salvage_mtnX 2-hydro 97.9 9.1E-05 2E-09 68.6 10.8 38 174-219 143-180 (214)
125 TIGR01489 DKMTPPase-SF 2,3-dik 97.8 0.0002 4.4E-09 64.2 11.4 37 172-214 146-182 (188)
126 PF13474 SnoaL_3: SnoaL-like d 97.8 0.00021 4.6E-09 59.1 9.6 109 292-407 3-117 (121)
127 TIGR01106 ATPase-IIC_X-K sodiu 97.7 0.00027 6E-09 79.8 12.8 62 167-238 665-727 (997)
128 smart00577 CPDc catalytic doma 97.7 0.0002 4.3E-09 62.4 9.2 29 183-214 107-135 (148)
129 COG0647 NagD Predicted sugar p 97.7 0.0014 3.1E-08 62.6 15.6 49 173-224 189-238 (269)
130 PRK10671 copA copper exporting 97.7 9.6E-05 2.1E-09 82.1 7.9 71 168-257 695-765 (834)
131 PF14534 DUF4440: Domain of un 97.7 0.00064 1.4E-08 54.6 10.8 88 307-402 15-106 (107)
132 COG0241 HisB Histidinol phosph 97.7 0.00054 1.2E-08 61.4 11.1 49 173-224 104-152 (181)
133 TIGR01523 ATPase-IID_K-Na pota 97.6 0.00042 9E-09 78.6 11.9 60 168-237 728-788 (1053)
134 COG2179 Predicted hydrolase of 97.6 0.0008 1.7E-08 58.8 10.6 45 175-222 94-139 (175)
135 TIGR01672 AphA HAD superfamily 97.6 0.00026 5.7E-09 66.5 8.4 66 4-69 58-158 (237)
136 TIGR01686 FkbH FkbH-like domai 97.6 0.0011 2.4E-08 65.4 13.0 37 175-214 87-123 (320)
137 TIGR01517 ATPase-IIB_Ca plasma 97.6 0.00051 1.1E-08 77.3 11.7 125 35-237 586-711 (941)
138 COG1011 Predicted hydrolase (H 97.4 0.00011 2.4E-09 68.3 3.6 46 176-224 156-202 (229)
139 TIGR01647 ATPase-IIIA_H plasma 97.4 0.001 2.3E-08 73.0 11.6 62 166-237 515-576 (755)
140 TIGR01524 ATPase-IIIB_Mg magne 97.4 0.0013 2.9E-08 73.2 12.5 123 35-237 522-644 (867)
141 TIGR01511 ATPase-IB1_Cu copper 97.4 0.00056 1.2E-08 72.7 9.1 66 175-257 454-519 (562)
142 TIGR01497 kdpB K+-transporting 97.4 0.00056 1.2E-08 73.5 8.8 98 175-300 496-595 (675)
143 TIGR01512 ATPase-IB2_Cd heavy 97.3 0.00058 1.3E-08 72.2 8.2 54 175-236 413-467 (536)
144 PRK01122 potassium-transportin 97.3 0.0006 1.3E-08 73.4 8.3 85 195-300 508-594 (679)
145 PRK10517 magnesium-transportin 97.3 0.0019 4.1E-08 72.2 12.6 124 35-238 557-680 (902)
146 TIGR01522 ATPase-IIA2_Ca golgi 97.3 0.001 2.2E-08 74.5 10.1 60 168-237 600-660 (884)
147 PRK15122 magnesium-transportin 97.3 0.0017 3.8E-08 72.6 11.9 125 34-238 556-680 (903)
148 TIGR01116 ATPase-IIA1_Ca sarco 97.3 0.00028 6E-09 79.2 5.6 44 193-237 629-672 (917)
149 TIGR01663 PNK-3'Pase polynucle 97.3 0.0014 3.1E-08 68.4 10.3 41 174-214 263-304 (526)
150 PF00702 Hydrolase: haloacid d 97.2 0.0014 3E-08 59.9 8.7 36 176-214 180-215 (215)
151 PRK14010 potassium-transportin 97.2 0.0013 2.9E-08 70.7 9.3 54 176-237 492-545 (673)
152 TIGR01490 HAD-SF-IB-hyp1 HAD-s 97.2 0.0003 6.4E-09 64.2 3.6 48 171-222 151-198 (202)
153 PF13242 Hydrolase_like: HAD-h 97.1 0.0007 1.5E-08 51.7 4.6 49 173-224 3-52 (75)
154 KOG3040 Predicted sugar phosph 97.1 0.0092 2E-07 54.0 11.9 61 1-67 1-61 (262)
155 COG2217 ZntA Cation transport 97.1 0.0017 3.6E-08 70.2 8.5 73 166-257 580-652 (713)
156 PRK11033 zntA zinc/cadmium/mer 97.1 0.0016 3.5E-08 71.4 8.3 59 168-237 612-670 (741)
157 COG0474 MgtA Cation transport 97.0 0.0043 9.3E-08 69.6 11.7 61 167-237 620-681 (917)
158 TIGR01544 HAD-SF-IE haloacid d 97.0 0.0016 3.4E-08 62.5 6.8 38 173-213 190-230 (277)
159 TIGR01657 P-ATPase-V P-type AT 97.0 0.0044 9.6E-08 70.6 11.1 59 166-236 782-840 (1054)
160 PTZ00445 p36-lilke protein; Pr 96.9 0.0052 1.1E-07 56.2 8.8 53 169-224 156-208 (219)
161 PF12689 Acid_PPase: Acid Phos 96.9 0.008 1.7E-07 53.5 9.9 53 166-223 101-153 (169)
162 PF08235 LNS2: LNS2 (Lipin/Ned 96.8 0.0023 4.9E-08 56.0 5.7 54 11-64 1-62 (157)
163 PF06437 ISN1: IMP-specific 5' 96.7 0.034 7.5E-07 54.9 13.3 212 8-227 146-405 (408)
164 PF13344 Hydrolase_6: Haloacid 96.7 0.004 8.7E-08 50.5 5.7 53 12-68 1-56 (101)
165 TIGR01675 plant-AP plant acid 96.6 0.011 2.3E-07 55.2 8.6 64 6-69 74-163 (229)
166 TIGR01652 ATPase-Plipid phosph 96.4 0.019 4.1E-07 65.7 10.7 62 166-236 748-810 (1057)
167 COG4087 Soluble P-type ATPase 96.3 0.0064 1.4E-07 51.0 4.5 52 181-236 83-137 (152)
168 TIGR02246 conserved hypothetic 96.2 0.097 2.1E-06 43.4 11.8 100 308-409 21-126 (128)
169 TIGR01691 enolase-ppase 2,3-di 95.9 0.023 5.1E-07 52.9 7.2 46 173-221 151-196 (220)
170 PF08645 PNK3P: Polynucleotide 95.8 0.0091 2E-07 52.7 3.8 44 10-54 1-54 (159)
171 TIGR01533 lipo_e_P4 5'-nucleot 95.8 0.052 1.1E-06 52.0 9.0 62 8-69 74-161 (266)
172 COG4359 Uncharacterized conser 95.8 0.072 1.6E-06 47.5 9.0 42 170-219 142-183 (220)
173 PF13419 HAD_2: Haloacid dehal 95.7 0.011 2.3E-07 51.7 3.8 47 171-220 130-176 (176)
174 PLN03190 aminophospholipid tra 95.7 0.17 3.8E-06 58.2 14.3 60 167-235 852-912 (1178)
175 KOG0207 Cation transport ATPas 95.5 0.054 1.2E-06 58.9 8.8 73 166-257 766-838 (951)
176 TIGR01509 HAD-SF-IA-v3 haloaci 95.4 0.018 3.9E-07 51.1 4.3 46 172-220 138-183 (183)
177 KOG0203 Na+/K+ ATPase, alpha s 95.3 0.15 3.3E-06 55.1 11.2 40 195-235 706-746 (1019)
178 KOG0202 Ca2+ transporting ATPa 95.2 0.027 6E-07 60.6 5.2 77 176-260 666-744 (972)
179 KOG2116 Protein involved in pl 95.2 0.023 5E-07 59.4 4.5 77 8-84 529-613 (738)
180 PLN02811 hydrolase 95.1 0.028 6E-07 52.1 4.6 51 171-224 134-187 (220)
181 PF12710 HAD: haloacid dehalog 95.1 0.085 1.8E-06 47.2 7.7 36 175-211 157-192 (192)
182 KOG0210 P-type ATPase [Inorgan 94.7 0.14 3E-06 54.2 8.6 75 132-219 731-805 (1051)
183 TIGR01456 CECR5 HAD-superfamil 94.3 0.072 1.6E-06 52.6 5.5 31 193-223 262-293 (321)
184 PF03767 Acid_phosphat_B: HAD 94.3 0.016 3.4E-07 54.4 0.7 50 8-57 71-143 (229)
185 PF05152 DUF705: Protein of un 94.1 0.3 6.6E-06 46.6 8.8 68 8-77 121-191 (297)
186 PF09419 PGP_phosphatase: Mito 94.1 0.18 3.9E-06 44.8 7.0 23 4-26 36-58 (168)
187 TIGR01680 Veg_Stor_Prot vegeta 94.0 0.14 3.1E-06 48.8 6.6 50 8-57 100-173 (275)
188 KOG2914 Predicted haloacid-hal 94.0 1.2 2.7E-05 41.3 12.6 51 169-222 146-197 (222)
189 KOG3085 Predicted hydrolase (H 93.8 0.062 1.3E-06 50.4 3.6 52 176-230 170-222 (237)
190 COG3882 FkbH Predicted enzyme 93.2 0.26 5.6E-06 50.3 7.1 64 4-67 217-293 (574)
191 TIGR01494 ATPase_P-type ATPase 93.1 0.24 5.1E-06 52.0 7.1 49 175-236 394-442 (499)
192 COG5083 SMP2 Uncharacterized p 92.9 0.09 1.9E-06 52.7 3.3 72 7-84 373-452 (580)
193 PF12680 SnoaL_2: SnoaL-like d 92.7 1.7 3.6E-05 33.7 10.1 62 308-374 12-73 (102)
194 PF03031 NIF: NLI interacting 92.5 0.11 2.4E-06 45.4 3.0 58 10-68 1-74 (159)
195 TIGR02251 HIF-SF_euk Dullard-l 92.4 0.36 7.7E-06 42.6 6.2 24 191-214 109-132 (162)
196 TIGR02250 FCP1_euk FCP1-like p 92.3 0.55 1.2E-05 41.2 7.2 61 7-68 4-96 (156)
197 COG4319 Ketosteroid isomerase 92.1 2.9 6.3E-05 35.6 11.0 115 285-410 7-132 (137)
198 COG4996 Predicted phosphatase 92.0 0.55 1.2E-05 39.6 6.4 60 10-69 1-81 (164)
199 PF08332 CaMKII_AD: Calcium/ca 91.6 3.3 7.1E-05 35.1 10.9 111 285-405 3-121 (128)
200 TIGR01493 HAD-SF-IA-v2 Haloaci 91.5 0.19 4.2E-06 44.4 3.5 39 171-212 136-174 (175)
201 COG3700 AphA Acid phosphatase 91.4 0.4 8.6E-06 42.6 5.2 54 4-57 58-142 (237)
202 PF06888 Put_Phosphatase: Puta 91.1 0.34 7.3E-06 45.5 4.8 44 171-214 146-189 (234)
203 KOG0209 P-type ATPase [Inorgan 91.0 0.23 4.9E-06 53.7 3.9 35 196-231 808-842 (1160)
204 PF12893 Lumazine_bd_2: Putati 90.9 3.1 6.7E-05 34.2 10.0 102 292-408 8-115 (116)
205 TIGR02245 HAD_IIID1 HAD-superf 90.7 0.61 1.3E-05 42.5 6.0 60 8-68 20-83 (195)
206 KOG1615 Phosphoserine phosphat 90.6 0.14 3E-06 46.1 1.6 41 169-214 153-193 (227)
207 TIGR01493 HAD-SF-IA-v2 Haloaci 88.4 0.21 4.5E-06 44.1 1.2 15 11-25 1-15 (175)
208 TIGR01672 AphA HAD superfamily 88.0 0.56 1.2E-05 44.1 3.8 83 124-221 127-211 (237)
209 COG2216 KdpB High-affinity K+ 85.9 0.7 1.5E-05 47.6 3.3 85 194-300 509-596 (681)
210 KOG3120 Predicted haloacid deh 85.3 0.85 1.8E-05 42.0 3.2 44 165-208 153-196 (256)
211 COG4030 Uncharacterized protei 85.2 0.96 2.1E-05 41.8 3.6 58 172-232 187-246 (315)
212 KOG0206 P-type ATPase [General 85.2 0.67 1.5E-05 52.7 3.1 41 176-223 782-822 (1151)
213 KOG0204 Calcium transporting A 85.1 0.94 2E-05 49.4 4.0 54 173-234 724-778 (1034)
214 PF04312 DUF460: Protein of un 84.9 2 4.4E-05 36.5 5.1 55 10-67 44-100 (138)
215 PF11533 DUF3225: Protein of u 84.7 22 0.00048 29.8 11.0 117 281-410 6-124 (125)
216 cd00781 ketosteroid_isomerase 84.3 16 0.00035 29.7 10.6 73 293-378 12-86 (122)
217 PLN02177 glycerol-3-phosphate 83.2 1.2 2.6E-05 46.7 3.8 39 176-222 177-215 (497)
218 TIGR01490 HAD-SF-IB-hyp1 HAD-s 81.6 0.72 1.6E-05 41.7 1.3 14 11-24 1-14 (202)
219 TIGR01509 HAD-SF-IA-v3 haloaci 79.6 0.79 1.7E-05 40.4 0.9 15 11-25 1-15 (183)
220 PF12710 HAD: haloacid dehalog 77.4 1.3 2.8E-05 39.4 1.6 22 178-202 117-138 (192)
221 KOG0205 Plasma membrane H+-tra 74.7 2.6 5.5E-05 44.9 3.0 40 195-235 585-624 (942)
222 TIGR01456 CECR5 HAD-superfamil 74.0 5.7 0.00012 39.1 5.3 54 11-68 2-63 (321)
223 KOG2134 Polynucleotide kinase 73.0 2.9 6.3E-05 41.7 2.8 44 8-52 74-127 (422)
224 TIGR02096 conserved hypothetic 71.7 22 0.00047 29.1 7.6 57 293-358 7-65 (129)
225 PF00702 Hydrolase: haloacid d 71.7 2 4.3E-05 38.8 1.3 17 10-26 2-18 (215)
226 PF06888 Put_Phosphatase: Puta 71.3 2.6 5.6E-05 39.6 2.0 15 11-25 2-16 (234)
227 PF09419 PGP_phosphatase: Mito 69.4 4 8.7E-05 36.3 2.7 50 174-223 114-166 (168)
228 KOG1615 Phosphoserine phosphat 67.3 21 0.00045 32.5 6.6 34 36-69 95-128 (227)
229 PF13577 SnoaL_4: SnoaL-like d 66.2 57 0.0012 26.3 9.1 84 285-377 7-93 (127)
230 PF06941 NT5C: 5' nucleotidase 64.2 3.8 8.2E-05 36.9 1.5 16 9-24 1-17 (191)
231 KOG4549 Magnesium-dependent ph 63.9 23 0.0005 29.9 5.9 60 9-68 18-84 (144)
232 PLN02177 glycerol-3-phosphate 61.7 5.5 0.00012 41.7 2.4 16 9-24 22-37 (497)
233 KOG1618 Predicted phosphatase 59.7 13 0.00027 36.4 4.1 57 8-68 34-98 (389)
234 PF07366 SnoaL: SnoaL-like pol 58.6 77 0.0017 25.8 8.5 87 308-400 15-111 (126)
235 KOG2882 p-Nitrophenyl phosphat 58.5 19 0.00041 34.9 5.2 51 176-229 226-277 (306)
236 KOG0208 Cation transport ATPas 56.9 7.7 0.00017 43.3 2.5 32 195-227 853-884 (1140)
237 PF10678 DUF2492: Protein of u 56.6 48 0.0011 25.4 6.1 39 303-341 19-58 (78)
238 KOG3109 Haloacid dehalogenase- 55.6 21 0.00046 33.1 4.7 46 176-224 162-208 (244)
239 KOG3120 Predicted haloacid deh 55.3 8.4 0.00018 35.7 2.1 19 6-24 10-28 (256)
240 PRK02228 V-type ATP synthase s 54.7 25 0.00054 28.3 4.6 64 196-260 2-66 (100)
241 TIGR01548 HAD-SF-IA-hyp1 haloa 50.7 37 0.00081 30.3 5.7 41 36-76 113-154 (197)
242 TIGR01422 phosphonatase phosph 50.1 32 0.00069 32.2 5.3 41 37-77 107-149 (253)
243 PLN02770 haloacid dehalogenase 49.9 41 0.0009 31.5 6.1 41 37-77 116-157 (248)
244 TIGR01459 HAD-SF-IIA-hyp4 HAD- 49.9 27 0.00059 32.6 4.8 34 178-214 82-115 (242)
245 TIGR03351 PhnX-like phosphonat 49.7 36 0.00078 30.9 5.5 41 37-77 95-138 (220)
246 PF11019 DUF2608: Protein of u 49.4 15 0.00033 34.8 3.0 39 169-210 156-194 (252)
247 TIGR02251 HIF-SF_euk Dullard-l 48.9 26 0.00057 30.7 4.2 17 9-25 1-17 (162)
248 KOG3109 Haloacid dehalogenase- 47.9 29 0.00063 32.2 4.3 22 5-26 11-32 (244)
249 PRK01395 V-type ATP synthase s 46.6 43 0.00093 27.2 4.8 63 195-259 4-66 (104)
250 KOG1605 TFIIF-interacting CTD 46.6 14 0.0003 35.3 2.2 19 6-24 86-104 (262)
251 PLN02499 glycerol-3-phosphate 46.3 13 0.00027 38.8 2.0 38 173-214 154-192 (498)
252 PF09949 DUF2183: Uncharacteri 46.0 1.1E+02 0.0024 24.6 7.0 67 140-211 10-82 (100)
253 COG4229 Predicted enolase-phos 45.1 81 0.0018 28.5 6.5 47 166-215 152-198 (229)
254 PF13419 HAD_2: Haloacid dehal 45.0 40 0.00087 28.6 4.8 41 37-77 85-126 (176)
255 PRK11590 hypothetical protein; 44.9 59 0.0013 29.6 6.1 38 40-77 107-144 (211)
256 PF14343 PrcB_C: PrcB C-termin 44.6 48 0.0011 23.8 4.4 34 342-378 7-40 (60)
257 TIGR01454 AHBA_synth_RP 3-amin 44.3 50 0.0011 29.6 5.5 31 39-69 85-115 (205)
258 TIGR01449 PGP_bact 2-phosphogl 43.8 57 0.0012 29.3 5.8 39 38-76 94-133 (213)
259 PRK13288 pyrophosphatase PpaX; 43.6 54 0.0012 29.7 5.6 33 37-69 90-122 (214)
260 TIGR01533 lipo_e_P4 5'-nucleot 43.6 47 0.001 31.8 5.3 33 172-211 173-205 (266)
261 PRK10463 hydrogenase nickel in 42.7 1.2E+02 0.0025 29.6 7.9 69 142-222 91-162 (290)
262 TIGR01545 YfhB_g-proteo haloac 42.7 67 0.0014 29.4 6.1 37 40-76 106-142 (210)
263 COG3700 AphA Acid phosphatase 42.6 14 0.0003 33.1 1.4 80 126-220 129-210 (237)
264 COG0546 Gph Predicted phosphat 42.0 61 0.0013 29.7 5.8 40 37-76 97-137 (220)
265 TIGR01511 ATPase-IB1_Cu copper 41.4 44 0.00096 35.7 5.3 57 9-68 385-444 (562)
266 TIGR01544 HAD-SF-IE haloacid d 41.3 63 0.0014 31.2 5.8 45 35-79 127-171 (277)
267 KOG2882 p-Nitrophenyl phosphat 40.8 52 0.0011 32.0 5.1 54 9-66 22-75 (306)
268 PRK00748 1-(5-phosphoribosyl)- 40.5 2.9E+02 0.0063 25.3 12.2 50 169-224 168-223 (233)
269 PRK11587 putative phosphatase; 40.2 68 0.0015 29.2 5.8 17 8-24 2-18 (218)
270 PLN03243 haloacid dehalogenase 40.0 68 0.0015 30.5 5.8 41 37-77 117-158 (260)
271 TIGR02960 SigX5 RNA polymerase 39.6 3.6E+02 0.0078 26.0 11.7 69 291-373 211-283 (324)
272 COG2503 Predicted secreted aci 39.1 43 0.00093 31.6 4.1 17 8-24 78-94 (274)
273 PRK13478 phosphonoacetaldehyde 37.8 67 0.0014 30.4 5.5 32 37-68 109-140 (267)
274 PF01990 ATP-synt_F: ATP synth 37.7 24 0.00052 27.9 2.0 62 197-259 1-63 (95)
275 TIGR02244 HAD-IG-Ncltidse HAD 37.1 44 0.00096 33.3 4.2 44 176-222 279-324 (343)
276 PRK13836 conjugal transfer pro 36.8 2.3E+02 0.005 26.1 8.7 29 350-378 146-174 (220)
277 PF06062 UPF0231: Uncharacteri 36.1 53 0.0012 27.5 3.9 24 291-314 22-45 (121)
278 TIGR01491 HAD-SF-IB-PSPlk HAD- 35.6 68 0.0015 28.4 4.9 32 37-68 88-119 (201)
279 PRK13887 conjugal transfer pro 35.3 2.3E+02 0.0049 26.8 8.6 31 348-378 170-200 (250)
280 PLN02575 haloacid dehalogenase 35.0 78 0.0017 32.0 5.6 41 37-77 224-265 (381)
281 PRK10826 2-deoxyglucose-6-phos 35.0 95 0.0021 28.2 5.9 37 40-76 103-140 (222)
282 PF08645 PNK3P: Polynucleotide 34.4 51 0.0011 28.8 3.7 62 139-206 66-130 (159)
283 PF12707 DUF3804: Protein of u 34.0 2.4E+02 0.0051 23.5 7.1 75 312-393 23-105 (128)
284 COG4483 Uncharacterized protei 33.9 22 0.00048 26.1 1.1 27 179-212 6-32 (68)
285 TIGR02253 CTE7 HAD superfamily 33.6 91 0.002 28.1 5.5 40 37-76 102-142 (221)
286 PRK13865 type IV secretion sys 33.3 1.6E+02 0.0035 27.5 7.0 44 349-392 154-200 (229)
287 TIGR01428 HAD_type_II 2-haloal 33.2 1E+02 0.0022 27.4 5.6 38 39-76 102-140 (198)
288 PRK09552 mtnX 2-hydroxy-3-keto 33.0 92 0.002 28.4 5.4 31 36-66 81-111 (219)
289 COG4922 Uncharacterized protei 33.0 49 0.0011 27.3 3.0 74 332-413 46-124 (129)
290 KOG3085 Predicted hydrolase (H 33.0 29 0.00064 32.6 2.1 19 7-25 5-23 (237)
291 TIGR01488 HAD-SF-IB Haloacid D 32.7 88 0.0019 27.0 5.1 33 36-68 80-112 (177)
292 TIGR03853 matur_matur probable 32.0 1.8E+02 0.0039 22.3 5.7 37 305-341 19-56 (77)
293 PRK08241 RNA polymerase factor 32.0 3.1E+02 0.0067 26.8 9.4 75 285-373 217-293 (339)
294 PRK13223 phosphoglycolate phos 31.3 1.1E+02 0.0023 29.3 5.7 31 38-68 110-140 (272)
295 PRK14988 GMP/IMP nucleotidase; 30.0 1.1E+02 0.0024 28.1 5.4 42 36-77 100-142 (224)
296 PLN02954 phosphoserine phospha 29.8 96 0.0021 28.1 5.0 33 37-69 92-124 (224)
297 COG5663 Uncharacterized conser 29.5 38 0.00083 30.1 2.0 38 198-236 137-175 (194)
298 PRK13222 phosphoglycolate phos 29.5 1.4E+02 0.0031 26.8 6.1 30 40-69 104-133 (226)
299 PRK13587 1-(5-phosphoribosyl)- 29.4 4.7E+02 0.01 24.3 11.8 56 167-225 168-225 (234)
300 COG0560 SerB Phosphoserine pho 29.0 88 0.0019 28.8 4.5 34 36-69 84-117 (212)
301 COG2433 Uncharacterized conser 29.0 1.2E+02 0.0025 32.5 5.7 55 10-67 256-312 (652)
302 PRK13226 phosphoglycolate phos 28.3 1.4E+02 0.0031 27.3 5.9 32 37-68 103-134 (229)
303 TIGR02009 PGMB-YQAB-SF beta-ph 27.9 1.1E+02 0.0023 26.7 4.8 37 38-76 97-134 (185)
304 KOG2469 IMP-GMP specific 5'-nu 27.9 52 0.0011 33.3 2.9 40 7-47 25-64 (424)
305 PF01282 Ribosomal_S24e: Ribos 27.3 1.4E+02 0.0031 23.1 4.8 32 167-201 3-37 (84)
306 smart00775 LNS2 LNS2 domain. T 27.0 82 0.0018 27.4 3.8 38 175-215 102-140 (157)
307 TIGR03572 WbuZ glycosyl amidat 26.9 4.9E+02 0.011 23.8 13.9 30 194-223 197-229 (232)
308 TIGR01182 eda Entner-Doudoroff 26.6 5E+02 0.011 23.8 9.5 34 304-340 134-167 (204)
309 TIGR00338 serB phosphoserine p 26.0 1.3E+02 0.0028 27.1 5.1 33 37-69 93-125 (219)
310 TIGR01512 ATPase-IB2_Cd heavy 25.6 1.1E+02 0.0023 32.5 5.0 59 10-68 343-402 (536)
311 TIGR01549 HAD-SF-IA-v1 haloaci 25.3 1.4E+02 0.0031 25.1 5.0 31 36-66 71-101 (154)
312 TIGR01489 DKMTPPase-SF 2,3-dik 24.5 1.6E+02 0.0035 25.5 5.3 15 10-24 2-16 (188)
313 COG2421 Predicted acetamidase/ 24.1 29 0.00062 33.7 0.3 83 278-380 20-103 (305)
314 PRK13872 conjugal transfer pro 23.9 4.6E+02 0.01 24.2 8.4 44 351-394 154-200 (228)
315 PRK01189 V-type ATP synthase s 23.4 1.2E+02 0.0025 24.7 3.7 64 196-260 4-68 (104)
316 TIGR01658 EYA-cons_domain eyes 23.3 1E+02 0.0022 29.3 3.7 55 171-229 210-264 (274)
317 COG4087 Soluble P-type ATPase 23.0 1E+02 0.0022 26.4 3.3 53 11-68 16-68 (152)
318 PF11019 DUF2608: Protein of u 22.7 48 0.001 31.5 1.5 17 8-24 19-35 (252)
319 PF14824 Sirohm_synth_M: Siroh 21.7 1.2E+02 0.0025 18.8 2.5 23 44-66 3-26 (30)
320 PF03215 Rad17: Rad17 cell cyc 21.5 1.4E+02 0.0031 31.5 4.9 49 135-193 24-72 (519)
321 PRK03957 V-type ATP synthase s 21.3 1.4E+02 0.0031 23.9 3.8 61 196-257 2-63 (100)
322 cd00667 ring_hydroxylating_dio 21.1 5.2E+02 0.011 22.0 8.0 82 285-372 4-107 (160)
323 PRK09636 RNA polymerase sigma 20.8 6.7E+02 0.014 23.9 9.2 72 292-374 179-258 (293)
324 TIGR03333 salvage_mtnX 2-hydro 20.6 2.5E+02 0.0054 25.4 5.9 32 36-67 77-108 (214)
325 cd04732 HisA HisA. Phosphorib 20.6 6.5E+02 0.014 22.9 13.1 42 177-224 179-222 (234)
No 1
>PLN02382 probable sucrose-phosphatase
Probab=100.00 E-value=7.5e-101 Score=773.97 Aligned_cols=411 Identities=73% Similarity=1.225 Sum_probs=384.0
Q ss_pred CCccccCCCeEEEEeCCCCCCCCCCCCCccHHHHHHHHHHHHcCCcEEEEEcCCCHHHHHHHHHhCCCCCCCEEEEccCc
Q 014608 1 MDRLSAAARLMIVSDLDHTMVDHHDAENLSLLRFNALWEAHYRRDSLLVFSTGRSPTLYKQLRKEKPMLTPDITIMSVGT 80 (421)
Q Consensus 1 M~rl~~~~~klI~~DLDGTLl~~~~~~~~s~~~~~al~~~l~~~g~~vviaTGRs~~~~~~l~~~~~~~~~d~~I~~nGa 80 (421)
|+||+++++.||++||||||++++++.+.+..++++++++++++|+.|+++|||++..+..+++.+++..|+++|++||+
T Consensus 1 ~~~~~~~~~~lI~sDLDGTLL~~~~~~~~s~~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt 80 (413)
T PLN02382 1 MDRLSGSPRLMIVSDLDHTMVDHHDPENLSLLRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGT 80 (413)
T ss_pred CCcccCCCCEEEEEcCCCcCcCCCCccchhHHHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCc
Confidence 89999999999999999999988654467778899998789999999999999999999999999999999999999999
Q ss_pred EEEeCCccCCcccHHHHHhchhhhhHHHHHhhcCCCCcccCCcCCCceEEEEEEcccchHHHHHHHHHHHHhcCCcEEEE
Q 014608 81 EITYGDAMVPDNGWVEVLNQKWDKKIVTEEASRFPELKLQSETEQRPHKVSFYVDKDKAQTVTQKLSEIFKNRGLDVKII 160 (421)
Q Consensus 81 ~I~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~ 160 (421)
.|++++.+.++..|..+++..|.+..+.+....++.+.+++..++.++|++++.+++....+...+.+.+.+.+.++.++
T Consensus 81 ~I~~~~~~~~d~~w~~~l~~~w~~~~v~~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~~~~i~ 160 (413)
T PLN02382 81 EIAYGESMVPDHGWVEYLNKKWDREIVVEETSKFPELKLQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGLDVKII 160 (413)
T ss_pred EEEeCCCCccChhHHHHHhccCChhhHHHHHhcCCCcccCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCCcEEEE
Confidence 99998888888899999999998876767677787777777777889999998876555566677888787667788888
Q ss_pred EEcCeeEEEecCCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEecCChHHHHHHHHhhcCCCCc
Q 014608 161 YSGGMDLDILPQGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMVSNAQEELLQWHAANAKNNPK 240 (421)
Q Consensus 161 ~s~~~~ldI~p~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav~NA~~elk~~a~~v~~~~~~ 240 (421)
++++.++||+|+++|||.||++|+++++..|++++++++||||.||++||+.+|++||||+||.+++|++|++++.++++
T Consensus 161 ~s~~~~ldI~p~g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~elk~~a~~~~~~~~~ 240 (413)
T PLN02382 161 YSGGIDLDVLPQGAGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEELLQWYAENAKDNPK 240 (413)
T ss_pred EECCcEEEEEeCCCCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHHHHHHHHhhccCCCc
Confidence 99999999999999999999999999966689999999999999999999999956999999999999999999988889
Q ss_pred eeeccCCCccHHHHHHHHhhCCCCCCCCCCCCCCCCccccCCchhHHHHHHHHHHHHhcccccCCHHHHHHHHhccCCCc
Q 014608 241 LTHATERCAAGIIQAIGHFKLGPSTSPRDIKDESDGEVKSIDLGHEVVKLYLFYERWRRAEIDNSEIYLSSLKANCCPSG 320 (421)
Q Consensus 241 ~~~~~~~~~~GV~~~l~~~~l~~~~~~r~~~~~~~~~~~~~~~~~evv~~~~~~e~w~~~~~~~~~~~~~~l~~~~~p~~ 320 (421)
++++++++++||+++|++|.|+||+||||+.+|++++++..+|+||||+||++||+||+||||+++++|++||++|+|+|
T Consensus 241 ~~~a~~~~~~GI~~al~~f~l~~~~~~~~~~~~~~~~~~~~~~~~evv~~~~~~e~W~~~~~~~~~~~~~~l~~~~~p~~ 320 (413)
T PLN02382 241 IIHATERCAAGIIQAIGHFNLGPNVSPRDVSDFLYGKLDNVNPAHEVVKFYLFYEKWRRGEVENSDEVFQRLKSSCAPNG 320 (413)
T ss_pred EEEcCCCCccHHHHHHHHhCCCCCCChhhcccccccccccCCcHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHhcCCCe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEeCCCCcccCHHHHHHHHHhhcCCCCCceEEEEEeeeEEeeeeCCeEEEEEeeeEEeCcceeeEEEEEEEEEeC--CCC
Q 014608 321 FCVPPSGGEISLAEAINQFRKCYGDKQGKQFRVWVDRVLSTEIGPGTWLVKFHKWELSGEERACSIVSIIVRIKD--ASD 398 (421)
Q Consensus 321 ~~v~~~G~~~~~~~~~~~~~~~~g~~~g~~~~i~vd~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~t~~~~~~~--~~~ 398 (421)
|||||+|+++|++++++.|+++||+||||+||||||++++++.++++|||||+|||+++++++||+|||||++|+ ++|
T Consensus 321 ~~v~p~G~~~~~~~~~~~~~~~~G~~~g~~~~i~vd~~~~~~~~~~~~~v~~~e~q~~~~~~~~~~ttavl~~~~~~~~~ 400 (413)
T PLN02382 321 VFVHPSGVEKSLHDSIDELRSCYGDKKGKKFRVWVDRVLSTQLGPDTWLVKFDKWEQSGDERKCCLTTALLTSKEDTPNG 400 (413)
T ss_pred eEECCCcccCCHHHHHHHHHHhhCCCCCCEEEEEEeeEEEEEEcCCeEEEEEeeeeecCCcceeEEEEEEEeeCCCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999987 999
Q ss_pred eeEEEeeeecccC
Q 014608 399 HTYMHVHETWLEG 411 (421)
Q Consensus 399 ~~w~h~het~~~~ 411 (421)
++|+||||||++|
T Consensus 401 ~~W~hlheTw~~~ 413 (413)
T PLN02382 401 LEWMHVHQTWLEG 413 (413)
T ss_pred eEEEEeeecccCC
Confidence 9999999999986
No 2
>PF08472 S6PP_C: Sucrose-6-phosphate phosphohydrolase C-terminal; InterPro: IPR013679 This is the Sucrose-6-phosphate phosphohydrolase (S6PP or SPP) C-terminal domain [] as found in plant sucrose phosphatases. These enzymes irreversibly catalyse the last step in sucrose synthesis following the formation of Sucrose-6-Phosphate via sucrose-phosphate synthase (SPS). ; GO: 0000287 magnesium ion binding, 0050307 sucrose-phosphate phosphatase activity, 0005986 sucrose biosynthetic process
Probab=100.00 E-value=5e-52 Score=341.59 Aligned_cols=133 Identities=57% Similarity=1.054 Sum_probs=131.5
Q ss_pred CCCCCCCCCCCCCCCccccCCchhHHHHHHHHHHHHhcccccCCHHHHHHHHhccCCCceEeCCCCcccCHHHHHHHHHh
Q 014608 262 GPSTSPRDIKDESDGEVKSIDLGHEVVKLYLFYERWRRAEIDNSEIYLSSLKANCCPSGFCVPPSGGEISLAEAINQFRK 341 (421)
Q Consensus 262 ~~~~~~r~~~~~~~~~~~~~~~~~evv~~~~~~e~w~~~~~~~~~~~~~~l~~~~~p~~~~v~~~G~~~~~~~~~~~~~~ 341 (421)
|||+||||+.||+++++++++|+||||+||+|||+|||||||+++.+|++||+.++|+++||||+|+|.++++.|+.|++
T Consensus 1 GPnvSPRDv~d~~~~k~~~~~p~~eVV~Fylf~EkWrrgEVe~se~~~~~LK~~~~~~g~~vhPsGvE~slh~~Id~Lr~ 80 (133)
T PF08472_consen 1 GPNVSPRDVSDFSYPKMENFSPAHEVVKFYLFYEKWRRGEVENSEEYFQRLKSVCHPNGTFVHPSGVEKSLHDSIDALRS 80 (133)
T ss_pred CCCCCccccccccccccccCCchHhhehhhhhhhHHhhcccCCcHHHHHHhhhhhccCcCEEccccccccHHHHHHHHHH
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCCceEEEEEeeeEEeeeeCCeEEEEEeeeEEeCcceeeEEEEEEEEEe
Q 014608 342 CYGDKQGKQFRVWVDRVLSTEIGPGTWLVKFHKWELSGEERACSIVSIIVRIK 394 (421)
Q Consensus 342 ~~g~~~g~~~~i~vd~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~t~~~~~~ 394 (421)
|||+|+||+||||||+|+.+++++++|||||++||++|++++||.|||+|+.|
T Consensus 81 ~yGdkqgK~frvWVDrv~~~~v~~~~WLvkFdkWE~sg~e~~cc~tT~ll~~K 133 (133)
T PF08472_consen 81 CYGDKQGKKFRVWVDRVRSTQVGSDTWLVKFDKWELSGEERRCCLTTALLSSK 133 (133)
T ss_pred HhhhhcCcEEEEEEEeeeEEeecCccEEEEeeehhccCCeeEEEEEEEEEeeC
Confidence 99999999999999999999999999999999999999999999999999875
No 3
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=100.00 E-value=1.1e-41 Score=322.50 Aligned_cols=247 Identities=41% Similarity=0.713 Sum_probs=203.7
Q ss_pred CCeEEEEeCCCCCCCCCCCCCccHHHHHHHHHHHHcCCcEEEEEcCCCHHHHHHHHHhCCCCCCCEEEEccCcEEEeCCc
Q 014608 8 ARLMIVSDLDHTMVDHHDAENLSLLRFNALWEAHYRRDSLLVFSTGRSPTLYKQLRKEKPMLTPDITIMSVGTEITYGDA 87 (421)
Q Consensus 8 ~~klI~~DLDGTLl~~~~~~~~s~~~~~al~~~l~~~g~~vviaTGRs~~~~~~l~~~~~~~~~d~~I~~nGa~I~~~~~ 87 (421)
+++||++||||||++.. ..+...++++++...+.++.|+++|||+..++..+.+..+++.||++||++|+.|+++..
T Consensus 1 ~~~ll~sDlD~Tl~~~~---~~~~~~l~~~l~~~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd~~I~svGt~I~~~~~ 77 (247)
T PF05116_consen 1 PPRLLASDLDGTLIDGD---DEALARLEELLEQQARPEILFVYVTGRSLESVLRLLREYNLPQPDYIITSVGTEIYYGEN 77 (247)
T ss_dssp -SEEEEEETBTTTBHCH---HHHHHHHHHHHHHHHCCGEEEEEE-SS-HHHHHHHHHHCT-EE-SEEEETTTTEEEESST
T ss_pred CCEEEEEECCCCCcCCC---HHHHHHHHHHHHHhhCCCceEEEECCCCHHHHHHHHHhCCCCCCCEEEecCCeEEEEcCC
Confidence 46899999999999222 234556777775456899999999999999999999999998999999999999999777
Q ss_pred cCCcccHHHHHhchhhhhHHHHHhhcCCCCcccCCcCCCceEEEEEEcccchHHHHHHHHHHHHhcCCcEEEEEEcCeeE
Q 014608 88 MVPDNGWVEVLNQKWDKKIVTEEASRFPELKLQSETEQRPHKVSFYVDKDKAQTVTQKLSEIFKNRGLDVKIIYSGGMDL 167 (421)
Q Consensus 88 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~s~~~~l 167 (421)
..++..|.+.+...|....+.+....++++..++...++.+|++|++........+..|.+.+...+..+++++|++..+
T Consensus 78 ~~~d~~w~~~i~~~w~~~~v~~~l~~~~~l~~q~~~~q~~~k~sy~~~~~~~~~~~~~i~~~l~~~~l~~~~i~s~~~~l 157 (247)
T PF05116_consen 78 WQPDEEWQAHIDERWDRERVEEILAELPGLRPQPESEQRPFKISYYVDPDDSADILEEIRARLRQRGLRVNVIYSNGRDL 157 (247)
T ss_dssp TEE-HHHHHHHHTT--HHHHHHHHHCHCCEEEGGCCCGCCTCECEEEETTSHCHHHHHHHHHHHCCTCEEEEEECTCCEE
T ss_pred CcChHHHHHHHHhcCChHHHHHHHHHhhCcccCCccccCCeeEEEEEecccchhHHHHHHHHHHHcCCCeeEEEccceeE
Confidence 78888999999999999888888888899988888889999999999876666667889999988899999999999999
Q ss_pred EEecCCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEecCChHHHHHHHHhhcCCCCceeeccCC
Q 014608 168 DILPQGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMVSNAQEELLQWHAANAKNNPKLTHATER 247 (421)
Q Consensus 168 dI~p~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav~NA~~elk~~a~~v~~~~~~~~~~~~~ 247 (421)
||+|+++||+.|+++|++++ ++++++++++|||+||++||.... ++|+|+||.+++.++.......+.++|+|+.+
T Consensus 158 dilP~~a~K~~Al~~L~~~~---~~~~~~vl~aGDSgND~~mL~~~~-~~vvV~Na~~e~~~~~~~~~~~~~~iy~a~~~ 233 (247)
T PF05116_consen 158 DILPKGASKGAALRYLMERW---GIPPEQVLVAGDSGNDLEMLEGGD-HGVVVGNAQPELLSWLLEKLRQQERIYFAQGP 233 (247)
T ss_dssp EEEETT-SHHHHHHHHHHHH---T--GGGEEEEESSGGGHHHHCCSS-EEEE-TTS-HHHHHHHHHCC-TTE--EE-SS-
T ss_pred EEccCCCCHHHHHHHHHHHh---CCCHHHEEEEeCCCCcHHHHcCcC-CEEEEcCCCHHHHHHHHHhcccCCceEecCCC
Confidence 99999999999999999999 999999999999999999998777 99999999999887776666777789999999
Q ss_pred CccHHHHHHHHhhC
Q 014608 248 CAAGIIQAIGHFKL 261 (421)
Q Consensus 248 ~~~GV~~~l~~~~l 261 (421)
+++||+|+|+||.|
T Consensus 234 ~a~GIlegl~~~~~ 247 (247)
T PF05116_consen 234 YAAGILEGLQHFGF 247 (247)
T ss_dssp THHHHHHHHHHTTT
T ss_pred CcHHHHHHHHHcCC
Confidence 99999999999975
No 4
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=100.00 E-value=8.1e-39 Score=304.00 Aligned_cols=247 Identities=62% Similarity=1.002 Sum_probs=203.1
Q ss_pred CeEEEEeCCCCCCCCCCCCCccHHHHHHHHHHHHcCCcEEEEEcCCCHHHHHHHHHhCCCCCCCEEEEccCcEEEeCCcc
Q 014608 9 RLMIVSDLDHTMVDHHDAENLSLLRFNALWEAHYRRDSLLVFSTGRSPTLYKQLRKEKPMLTPDITIMSVGTEITYGDAM 88 (421)
Q Consensus 9 ~klI~~DLDGTLl~~~~~~~~s~~~~~al~~~l~~~g~~vviaTGRs~~~~~~l~~~~~~~~~d~~I~~nGa~I~~~~~~ 88 (421)
+.+|++||||||+++++........+..++++++++|+.|+++|||++..+..+.+.+++..|+++|++||+.|++++..
T Consensus 1 ~~li~tDlDGTLl~~~~~~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~ 80 (249)
T TIGR01485 1 RLLLVSDLDNTLVDHTDGDNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAE 80 (249)
T ss_pred CeEEEEcCCCcCcCCCCCChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCC
Confidence 36899999999998532222222445566667899999999999999999999999999888999999999999987655
Q ss_pred CCcccHHHHHhchhhhhHHHHHhhcCCCCcccCCcCCCceEEEEEEcccchHHHHHHHHHHHHhcCCcEEEEEEcCeeEE
Q 014608 89 VPDNGWVEVLNQKWDKKIVTEEASRFPELKLQSETEQRPHKVSFYVDKDKAQTVTQKLSEIFKNRGLDVKIIYSGGMDLD 168 (421)
Q Consensus 89 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~s~~~~ld 168 (421)
.++..|..++...|..+.+......++.+..+....++.+|++++...+...+....+.+.+.+.+..+.++.+++.++|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ld 160 (249)
T TIGR01485 81 VPDQHWAEYLSEKWQRDIVVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLD 160 (249)
T ss_pred cCCHHHHHHHhcccCHHHHHHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEE
Confidence 56677888888778765555555566666655555678899998876555455567777777766677888889999999
Q ss_pred EecCCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcC-CCceEEEecCChHHHHHHHHhhcCCCCceeeccCC
Q 014608 169 ILPQGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSI-PEVYGVMVSNAQEELLQWHAANAKNNPKLTHATER 247 (421)
Q Consensus 169 I~p~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~-agv~gvav~NA~~elk~~a~~v~~~~~~~~~~~~~ 247 (421)
|+|+++||+.|+++|++++ |++++++++|||+.||++||+. ++ ++|+|+||.+++|+.++.. +++++|++...
T Consensus 161 i~~~~~~K~~al~~l~~~~---~i~~~~~i~~GD~~ND~~ml~~~~~-~~va~~na~~~~k~~~~~~--~~~~~~~~~~~ 234 (249)
T TIGR01485 161 ILPQGSGKGQALQYLLQKL---AMEPSQTLVCGDSGNDIELFEIGSV-RGVIVSNAQEELLQWYDEN--AKDKIYHASER 234 (249)
T ss_pred EEeCCCChHHHHHHHHHHc---CCCccCEEEEECChhHHHHHHccCC-cEEEECCCHHHHHHHHHhc--ccCcEEEecCC
Confidence 9999999999999999999 9999999999999999999998 55 8999999999999876543 34578899999
Q ss_pred CccHHHHHHHHhhC
Q 014608 248 CAAGIIQAIGHFKL 261 (421)
Q Consensus 248 ~~~GV~~~l~~~~l 261 (421)
+.+||+++|++|.|
T Consensus 235 ~~~Gi~e~l~~~~~ 248 (249)
T TIGR01485 235 CAGGIIEAIAHFDL 248 (249)
T ss_pred CcHHHHHHHHHcCC
Confidence 99999999999976
No 5
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=100.00 E-value=1.9e-36 Score=290.80 Aligned_cols=235 Identities=21% Similarity=0.245 Sum_probs=167.6
Q ss_pred CCeEEEEeCCCCCCCCCCCCCccHHHHHHHHHHHHcCCcEEEEEcCCCHHHHHHHHHhCCCCCC-CEEEEccCcEEEe--
Q 014608 8 ARLMIVSDLDHTMVDHHDAENLSLLRFNALWEAHYRRDSLLVFSTGRSPTLYKQLRKEKPMLTP-DITIMSVGTEITY-- 84 (421)
Q Consensus 8 ~~klI~~DLDGTLl~~~~~~~~s~~~~~al~~~l~~~g~~vviaTGRs~~~~~~l~~~~~~~~~-d~~I~~nGa~I~~-- 84 (421)
++|+|+|||||||++++.. ++..+.+++. +++++|+.|++||||++..+.++.+.+++..+ +++|++||+.|++
T Consensus 2 ~~kli~~DlDGTLl~~~~~--i~~~~~~ai~-~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~I~~NGa~i~~~~ 78 (270)
T PRK10513 2 AIKLIAIDMDGTLLLPDHT--ISPAVKQAIA-AARAKGVNVVLTTGRPYAGVHRYLKELHMEQPGDYCITNNGALVQKAA 78 (270)
T ss_pred ceEEEEEecCCcCcCCCCc--cCHHHHHHHH-HHHHCCCEEEEecCCChHHHHHHHHHhCCCCCCCeEEEcCCeEEEECC
Confidence 4799999999999987653 5666677777 68899999999999999999999999887543 5789999999986
Q ss_pred CCccCCcc-----cHHHH---Hhc-h-----hhhh----------HHHHHhhcCCCCcc----cCC--cCCCceEEEEEE
Q 014608 85 GDAMVPDN-----GWVEV---LNQ-K-----WDKK----------IVTEEASRFPELKL----QSE--TEQRPHKVSFYV 134 (421)
Q Consensus 85 ~~~~~~~~-----~~~~~---l~~-~-----~~~~----------~~~~~~~~~~~l~~----~~~--~~~~~~ki~~~~ 134 (421)
.++.+... ..... +.. . +..+ .............. ... ......|+.++.
T Consensus 79 ~~~~i~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ 158 (270)
T PRK10513 79 DGETVAQTALSYDDYLYLEKLSREVGVHFHALDRNTLYTANRDISYYTVHESFLTGIPLVFREVEKMDPNLQFPKVMMID 158 (270)
T ss_pred CCCEEEecCCCHHHHHHHHHHHHHcCCcEEEEECCEEEEecCCcchhHHHhhhhccCCccccchhhccccCCceEEEEeC
Confidence 34433222 12211 111 0 0000 00000000001100 001 112345665544
Q ss_pred cccchHHHHHHHHHHHHhcCCcEEEEEEcCeeEEEecCCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCC
Q 014608 135 DKDKAQTVTQKLSEIFKNRGLDVKIIYSGGMDLDILPQGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPE 214 (421)
Q Consensus 135 ~~~~~~~~~~~l~~~l~~~~~~~~v~~s~~~~ldI~p~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~ag 214 (421)
.++..+...+.+.+.+ ...+.++.++..++||+|+++|||.||++|++++ |++++++++|||+.||++||+.+|
T Consensus 159 ~~~~~~~~~~~~~~~~---~~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~~---gi~~~~v~afGD~~NDi~Ml~~ag 232 (270)
T PRK10513 159 EPEILDAAIARIPAEV---KERYTVLKSAPYFLEILDKRVNKGTGVKSLAEHL---GIKPEEVMAIGDQENDIAMIEYAG 232 (270)
T ss_pred CHHHHHHHHHHhHHHh---cCcEEEEEecCeeEEEeCCCCChHHHHHHHHHHh---CCCHHHEEEECCchhhHHHHHhCC
Confidence 3222233333333333 2357777888889999999999999999999999 999999999999999999999999
Q ss_pred ceEEEecCChHHHHHHHHhhcCCCCceeeccCCCccHHHHHHHHhhC
Q 014608 215 VYGVMVSNAQEELLQWHAANAKNNPKLTHATERCAAGIIQAIGHFKL 261 (421)
Q Consensus 215 v~gvav~NA~~elk~~a~~v~~~~~~~~~~~~~~~~GV~~~l~~~~l 261 (421)
+||||+||.+++|+.|++++.+|+ ++||+++|+++++
T Consensus 233 -~~vAm~NA~~~vK~~A~~vt~~n~---------~dGva~~i~~~~~ 269 (270)
T PRK10513 233 -VGVAMGNAIPSVKEVAQFVTKSNL---------EDGVAFAIEKYVL 269 (270)
T ss_pred -ceEEecCccHHHHHhcCeeccCCC---------cchHHHHHHHHhc
Confidence 899999999999999999988764 8999999999875
No 6
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=100.00 E-value=2e-36 Score=291.26 Aligned_cols=236 Identities=21% Similarity=0.256 Sum_probs=169.4
Q ss_pred CeEEEEeCCCCCCCCCCCCCccHHHHHHHHHHHHcCCcEEEEEcCCCHHHHHHHHHhCCCCCCCEEEEccCcEEEe-CCc
Q 014608 9 RLMIVSDLDHTMVDHHDAENLSLLRFNALWEAHYRRDSLLVFSTGRSPTLYKQLRKEKPMLTPDITIMSVGTEITY-GDA 87 (421)
Q Consensus 9 ~klI~~DLDGTLl~~~~~~~~s~~~~~al~~~l~~~g~~vviaTGRs~~~~~~l~~~~~~~~~d~~I~~nGa~I~~-~~~ 87 (421)
+|+|+|||||||++++.. ++..+.++|. +++++|+.|++||||++..+.++.+.+++. .++||+||+.|++ .+.
T Consensus 2 ~kli~~DlDGTLl~~~~~--i~~~~~~ai~-~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~--~~~I~~NGa~I~~~~~~ 76 (272)
T PRK15126 2 ARLAAFDMDGTLLMPDHH--LGEKTLSTLA-RLRERDITLTFATGRHVLEMQHILGALSLD--AYLITGNGTRVHSLEGE 76 (272)
T ss_pred ccEEEEeCCCcCcCCCCc--CCHHHHHHHH-HHHHCCCEEEEECCCCHHHHHHHHHHcCCC--CcEEecCCcEEEcCCCC
Confidence 689999999999987653 5666677777 688999999999999999999999988864 3589999999985 333
Q ss_pred cCCc-----ccHHHHHhch--------------hh----hhHHHHHhhcCCCC--ccc---CCcCCCceEEEEEEcccch
Q 014608 88 MVPD-----NGWVEVLNQK--------------WD----KKIVTEEASRFPEL--KLQ---SETEQRPHKVSFYVDKDKA 139 (421)
Q Consensus 88 ~~~~-----~~~~~~l~~~--------------~~----~~~~~~~~~~~~~l--~~~---~~~~~~~~ki~~~~~~~~~ 139 (421)
.+.. +...++++.. +. ....... ..+... ... ........|+.++.+++..
T Consensus 77 ~l~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~ 155 (272)
T PRK15126 77 LLHRQDLPADVAELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQA-HVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDL 155 (272)
T ss_pred EEEeecCCHHHHHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHH-HHhcCCceEEecHHHccccCceEEEEECCHHHH
Confidence 2222 2222322210 00 0000000 000011 100 1112346677665543333
Q ss_pred HHHHHHHHHHHHhcCCcEEEEEEcCeeEEEecCCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEE
Q 014608 140 QTVTQKLSEIFKNRGLDVKIIYSGGMDLDILPQGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVM 219 (421)
Q Consensus 140 ~~~~~~l~~~l~~~~~~~~v~~s~~~~ldI~p~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gva 219 (421)
+++.+.+.+.+. ..+.++.++..++||+|+++|||.||++|++++ |++++++++|||+.||++||+.+| +|||
T Consensus 156 ~~~~~~l~~~~~---~~~~~~~s~~~~~eI~~~g~sKg~al~~l~~~~---gi~~~~v~afGD~~NDi~Ml~~ag-~~vA 228 (272)
T PRK15126 156 TRLQIQLNEALG---ERAHLCFSATDCLEVLPVGCNKGAALAVLSQHL---GLSLADCMAFGDAMNDREMLGSVG-RGFI 228 (272)
T ss_pred HHHHHHHHHHhc---CCEEEEEcCCcEEEeecCCCChHHHHHHHHHHh---CCCHHHeEEecCCHHHHHHHHHcC-Ccee
Confidence 333333433332 346777787789999999999999999999999 999999999999999999999999 9999
Q ss_pred ecCChHHHHHHHHh--hcCCCCceeeccCCCccHHHHHHHHhhCCCCCC
Q 014608 220 VSNAQEELLQWHAA--NAKNNPKLTHATERCAAGIIQAIGHFKLGPSTS 266 (421)
Q Consensus 220 v~NA~~elk~~a~~--v~~~~~~~~~~~~~~~~GV~~~l~~~~l~~~~~ 266 (421)
|+||.+++|+.|++ ++++| +++||+++|++++..|.++
T Consensus 229 m~Na~~~vK~~A~~~~v~~~n---------~edGva~~l~~~~~~~~~~ 268 (272)
T PRK15126 229 MGNAMPQLRAELPHLPVIGHC---------RNQAVSHYLTHWLDYPHLP 268 (272)
T ss_pred ccCChHHHHHhCCCCeecCCC---------cchHHHHHHHHHhcCCCCC
Confidence 99999999999876 66665 4899999999999888653
No 7
>PRK10976 putative hydrolase; Provisional
Probab=100.00 E-value=4.2e-36 Score=287.89 Aligned_cols=232 Identities=22% Similarity=0.264 Sum_probs=164.0
Q ss_pred CeEEEEeCCCCCCCCCCCCCccHHHHHHHHHHHHcCCcEEEEEcCCCHHHHHHHHHhCCCCCCCEEEEccCcEEEe-CCc
Q 014608 9 RLMIVSDLDHTMVDHHDAENLSLLRFNALWEAHYRRDSLLVFSTGRSPTLYKQLRKEKPMLTPDITIMSVGTEITY-GDA 87 (421)
Q Consensus 9 ~klI~~DLDGTLl~~~~~~~~s~~~~~al~~~l~~~g~~vviaTGRs~~~~~~l~~~~~~~~~d~~I~~nGa~I~~-~~~ 87 (421)
+|+|++||||||++++.. ++..+.+++. +++++|++|++||||++..+.++.+.+++. .++||+||+.|++ ++.
T Consensus 2 ikli~~DlDGTLl~~~~~--is~~~~~ai~-~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~--~~~I~~NGa~i~~~~~~ 76 (266)
T PRK10976 2 YQVVASDLDGTLLSPDHT--LSPYAKETLK-LLTARGIHFVFATGRHHVDVGQIRDNLEIK--SYMITSNGARVHDTDGN 76 (266)
T ss_pred ceEEEEeCCCCCcCCCCc--CCHHHHHHHH-HHHHCCCEEEEEcCCChHHHHHHHHhcCCC--CeEEEcCCcEEECCCCC
Confidence 689999999999988753 5566777877 688999999999999999999999888763 4589999999986 343
Q ss_pred cCCcc-----cHHHH---Hhch------h-hhh-HH--------HHHhhcC-CCCccc---CCcCCCceEEEEEEcc-cc
Q 014608 88 MVPDN-----GWVEV---LNQK------W-DKK-IV--------TEEASRF-PELKLQ---SETEQRPHKVSFYVDK-DK 138 (421)
Q Consensus 88 ~~~~~-----~~~~~---l~~~------~-~~~-~~--------~~~~~~~-~~l~~~---~~~~~~~~ki~~~~~~-~~ 138 (421)
.+... ...++ +.+. + ..+ .+ ....... ...... ......+.|+.+...+ +.
T Consensus 77 ~i~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~ 156 (266)
T PRK10976 77 LIFSHNLDRDIASDLFGVVHDNPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLEPDGVSKVFFTCDSHEK 156 (266)
T ss_pred EehhhcCCHHHHHHHHHhhcccCCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhcccCCceEEEEEcCCHHH
Confidence 33221 12222 2110 0 000 00 0000000 000000 0112345676655432 22
Q ss_pred hHHHHHHHHHHHHhcCCcEEEEEEcCeeEEEecCCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEE
Q 014608 139 AQTVTQKLSEIFKNRGLDVKIIYSGGMDLDILPQGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGV 218 (421)
Q Consensus 139 ~~~~~~~l~~~l~~~~~~~~v~~s~~~~ldI~p~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gv 218 (421)
.+...+.+.+.+ +..+.++.++..++||+|+++|||.||++|++++ |++++++++|||+.||++||+.+| +||
T Consensus 157 ~~~~~~~l~~~~---~~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~l---gi~~~~viafGD~~NDi~Ml~~ag-~~v 229 (266)
T PRK10976 157 LLPLEQAINARW---GDRVNVSFSTLTCLEVMAGGVSKGHALEAVAKKL---GYSLKDCIAFGDGMNDAEMLSMAG-KGC 229 (266)
T ss_pred HHHHHHHHHHHh---CCcEEEEEeCCceEEEEcCCCChHHHHHHHHHHc---CCCHHHeEEEcCCcccHHHHHHcC-CCe
Confidence 222223333332 2357777888889999999999999999999999 999999999999999999999999 899
Q ss_pred EecCChHHHHHHHH--hhcCCCCceeeccCCCccHHHHHHHHhhC
Q 014608 219 MVSNAQEELLQWHA--ANAKNNPKLTHATERCAAGIIQAIGHFKL 261 (421)
Q Consensus 219 av~NA~~elk~~a~--~v~~~~~~~~~~~~~~~~GV~~~l~~~~l 261 (421)
||+||.+++|+.|+ +++++|+ ++||+++|+++++
T Consensus 230 Am~NA~~~vK~~A~~~~v~~~n~---------edGVa~~l~~~~~ 265 (266)
T PRK10976 230 IMGNAHQRLKDLLPELEVIGSNA---------DDAVPHYLRKLYL 265 (266)
T ss_pred eecCCcHHHHHhCCCCeecccCc---------hHHHHHHHHHHhh
Confidence 99999999999986 6777654 9999999999874
No 8
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=100.00 E-value=3.6e-35 Score=276.74 Aligned_cols=236 Identities=32% Similarity=0.526 Sum_probs=179.4
Q ss_pred EEEEeCCCCCCCCCCCCCccHHHHHHHHHHHHcCCcEEEEEcCCCHHHHHHHHHhCCCCCCCEEEEccCcEEEeCCccCC
Q 014608 11 MIVSDLDHTMVDHHDAENLSLLRFNALWEAHYRRDSLLVFSTGRSPTLYKQLRKEKPMLTPDITIMSVGTEITYGDAMVP 90 (421)
Q Consensus 11 lI~~DLDGTLl~~~~~~~~s~~~~~al~~~l~~~g~~vviaTGRs~~~~~~l~~~~~~~~~d~~I~~nGa~I~~~~~~~~ 90 (421)
+|++||||||++++. .++... ++++ ++++|+.++++|||++..+..+...+++..|+++|++||+.|++.....+
T Consensus 1 li~~DlDgTLl~~~~--~~~~~~--~~~~-~~~~gi~~viaTGR~~~~v~~~~~~l~l~~~~~~I~~nGa~i~~~~~~~~ 75 (236)
T TIGR02471 1 LIITDLDNTLLGDDE--GLASFV--ELLR-GSGDAVGFGIATGRSVESAKSRYAKLNLPSPDVLIARVGTEIYYGPELQP 75 (236)
T ss_pred CeEEeccccccCCHH--HHHHHH--HHHH-hcCCCceEEEEeCCCHHHHHHHHHhCCCCCCCEEEECCCceEEeCCCCCC
Confidence 589999999998653 233332 5554 58899999999999999999999999887789999999999987654444
Q ss_pred cccHHHHHhchhhhhHHHHHhhcCCCCcccCCcCCCceEEEEEEcccchHHHHHHHHHHHHhcCCcEEEEEEcCeeEEEe
Q 014608 91 DNGWVEVLNQKWDKKIVTEEASRFPELKLQSETEQRPHKVSFYVDKDKAQTVTQKLSEIFKNRGLDVKIIYSGGMDLDIL 170 (421)
Q Consensus 91 ~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~s~~~~ldI~ 170 (421)
+..|...+...|....+......++++........+.+++.+...++.. .....+.+.+.+.+..+.++.+++.++|++
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~ei~ 154 (236)
T TIGR02471 76 DRFWQKHIDHDWRRQAVVEALADIPGLTLQDDQEQGPFKISYLLDPEGE-PILPQIRQRLRQQSQAAKVILSCGWFLDVL 154 (236)
T ss_pred ChhHHHHHhcCCCHHHHHHHHhcCCCcEeCChhcCCCeeEEEEECcccc-hHHHHHHHHHHhccCCEEEEEECCceEEEe
Confidence 4455555554554433333344455554444444567888887754322 223455555655455667778888899999
Q ss_pred cCCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEecCChHHHHHHHHhhcCCCCceeeccCCCcc
Q 014608 171 PQGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMVSNAQEELLQWHAANAKNNPKLTHATERCAA 250 (421)
Q Consensus 171 p~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav~NA~~elk~~a~~v~~~~~~~~~~~~~~~~ 250 (421)
|+++||+.|+++|++++ |++++++++||||.||++||+.+| +||+|+||.+++|+.|+. ++++++..++++
T Consensus 155 ~~~~~K~~al~~l~~~~---g~~~~~~i~~GD~~nD~~ml~~~~-~~iav~na~~~~k~~a~~-----~~~~v~~~~~~~ 225 (236)
T TIGR02471 155 PLRASKGLALRYLSYRW---GLPLEQILVAGDSGNDEEMLRGLT-LGVVVGNHDPELEGLRHQ-----QRIYFANNPHAF 225 (236)
T ss_pred eCCCChHHHHHHHHHHh---CCCHHHEEEEcCCccHHHHHcCCC-cEEEEcCCcHHHHHhhcC-----CcEEEcCCCChh
Confidence 99999999999999999 999999999999999999999999 999999999999998762 233344445699
Q ss_pred HHHHHHHHhhC
Q 014608 251 GIIQAIGHFKL 261 (421)
Q Consensus 251 GV~~~l~~~~l 261 (421)
||+++|++|.+
T Consensus 226 Gv~~~i~~~~~ 236 (236)
T TIGR02471 226 GILEGINHYDF 236 (236)
T ss_pred HHHHHHHhhCC
Confidence 99999999853
No 9
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=100.00 E-value=1.7e-35 Score=283.54 Aligned_cols=236 Identities=25% Similarity=0.309 Sum_probs=164.5
Q ss_pred CCCeEEEEeCCCCCCCCCCCCCccHHHHHHHHHHHHcCCcEEEEEcCCCHHHHHHHHHhCCCCCCCEEEEccCcEEEeCC
Q 014608 7 AARLMIVSDLDHTMVDHHDAENLSLLRFNALWEAHYRRDSLLVFSTGRSPTLYKQLRKEKPMLTPDITIMSVGTEITYGD 86 (421)
Q Consensus 7 ~~~klI~~DLDGTLl~~~~~~~~s~~~~~al~~~l~~~g~~vviaTGRs~~~~~~l~~~~~~~~~d~~I~~nGa~I~~~~ 86 (421)
+.+|+|+|||||||++++.. ++.....+|. +++++|+.++++|||++..+.++.+.+++.. ++|++||+.|++.+
T Consensus 1 ~~~kli~~DlDGTLl~~~~~--i~~~~~~al~-~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~--~~I~~NGa~i~~~~ 75 (264)
T COG0561 1 MMIKLLAFDLDGTLLDSNKT--ISPETKEALA-RLREKGVKVVLATGRPLPDVLSILEELGLDG--PLITFNGALIYNGG 75 (264)
T ss_pred CCeeEEEEcCCCCccCCCCc--cCHHHHHHHH-HHHHCCCEEEEECCCChHHHHHHHHHcCCCc--cEEEeCCeEEecCC
Confidence 35799999999999999875 5555666666 6889999999999999999999999998754 59999999999986
Q ss_pred ccCCcccH-----HHHHhchhhh----------h-HH--------HHHhhcCCCCcc--cCCcCCCceEEEEEE-cccch
Q 014608 87 AMVPDNGW-----VEVLNQKWDK----------K-IV--------TEEASRFPELKL--QSETEQRPHKVSFYV-DKDKA 139 (421)
Q Consensus 87 ~~~~~~~~-----~~~l~~~~~~----------~-~~--------~~~~~~~~~l~~--~~~~~~~~~ki~~~~-~~~~~ 139 (421)
..+....+ ...+...... . .. .+....+....+ .........++.... ..+..
T Consensus 76 ~~i~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (264)
T COG0561 76 ELLFQKPLSREDVEELLELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEIL 155 (264)
T ss_pred cEEeeecCCHHHHHHHHHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhH
Confidence 55433221 1111110000 0 00 000000000000 000111112332222 22333
Q ss_pred HHHHHHHHHHHHhcCCcEEEEEEcCeeEEEecCCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEE
Q 014608 140 QTVTQKLSEIFKNRGLDVKIIYSGGMDLDILPQGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVM 219 (421)
Q Consensus 140 ~~~~~~l~~~l~~~~~~~~v~~s~~~~ldI~p~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gva 219 (421)
.+..+.+.+.+.. ..+.+..+....+||+|+++|||.|+++|++++ |++++++++||||.||++||+.+| +|||
T Consensus 156 ~~~~~~l~~~~~~--~~~~~~~s~~~~lei~~~g~~K~~al~~l~~~l---gi~~~~v~afGD~~ND~~Ml~~ag-~gva 229 (264)
T COG0561 156 EELVEALRKRFPD--LGLTVSSSGPISLDITPKGVSKGYALQRLAKLL---GIKLEEVIAFGDSTNDIEMLEVAG-LGVA 229 (264)
T ss_pred HHHHHHHhhhccc--cceEEEEcCCceEEEecCCCchHHHHHHHHHHh---CCCHHHeEEeCCccccHHHHHhcC-eeee
Confidence 4444445544432 234444554555999999999999999999999 999999999999999999999999 9999
Q ss_pred ecCChHHHHHHHHhhcCCCCceeeccCCCccHHHHHHHHhhCC
Q 014608 220 VSNAQEELLQWHAANAKNNPKLTHATERCAAGIIQAIGHFKLG 262 (421)
Q Consensus 220 v~NA~~elk~~a~~v~~~~~~~~~~~~~~~~GV~~~l~~~~l~ 262 (421)
|+||.+++|+.|++++.+|. ++||+++|+++++.
T Consensus 230 m~Na~~~~k~~A~~vt~~n~---------~~Gv~~~l~~~~~~ 263 (264)
T COG0561 230 MGNADEELKELADYVTTSND---------EDGVAEALEKLLLL 263 (264)
T ss_pred ccCCCHHHHhhCCcccCCcc---------chHHHHHHHHHhcc
Confidence 99999999999997777764 99999999999864
No 10
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=100.00 E-value=5.9e-34 Score=267.02 Aligned_cols=224 Identities=27% Similarity=0.369 Sum_probs=158.2
Q ss_pred CCeEEEEeCCCCCCCCCCCCCccHHHHHHHHHHHHcCCcEEEEEcCCCHHHHHHHHHhCCCCCCCEEEEccCcEEEeC--
Q 014608 8 ARLMIVSDLDHTMVDHHDAENLSLLRFNALWEAHYRRDSLLVFSTGRSPTLYKQLRKEKPMLTPDITIMSVGTEITYG-- 85 (421)
Q Consensus 8 ~~klI~~DLDGTLl~~~~~~~~s~~~~~al~~~l~~~g~~vviaTGRs~~~~~~l~~~~~~~~~d~~I~~nGa~I~~~-- 85 (421)
.+|+|+|||||||++++.. ++....++|. +++++|+.|++||||++..+.++.+.+++. .++|++||+.|+..
T Consensus 2 ~~kli~~DlDGTLl~~~~~--i~~~~~~al~-~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~--~~~i~~nGa~i~~~~~ 76 (230)
T PRK01158 2 KIKAIAIDIDGTITDKDRR--LSLKAVEAIR-KAEKLGIPVILATGNVLCFARAAAKLIGTS--GPVIAENGGVISVGFD 76 (230)
T ss_pred ceeEEEEecCCCcCCCCCc--cCHHHHHHHH-HHHHCCCEEEEEcCCchHHHHHHHHHhCCC--CcEEEecCeEEEEcCC
Confidence 3689999999999987753 5556677776 688999999999999999999888888863 46899999999874
Q ss_pred CccCCcccHHHHHhchhhhhHHHHHhhcCCCCc--ccC-CcCCCceEEEEEEcccchHHHHHHHHHHHHhcCCcEEEEEE
Q 014608 86 DAMVPDNGWVEVLNQKWDKKIVTEEASRFPELK--LQS-ETEQRPHKVSFYVDKDKAQTVTQKLSEIFKNRGLDVKIIYS 162 (421)
Q Consensus 86 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~--~~~-~~~~~~~ki~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~s 162 (421)
+..+....+.. .. ..+......++... ... .......++.+. ..... +.+.+.+.+.+..+.++.+
T Consensus 77 ~~~~~~~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~l~~~~~~~~~~~~ 145 (230)
T PRK01158 77 GKRIFLGDIEE-CE-----KAYSELKKRFPEASTSLTKLDPDYRKTEVALR-RTVPV----EEVRELLEELGLDLEIVDS 145 (230)
T ss_pred CCEEEEcchHH-HH-----HHHHHHHHhccccceeeecCCcccccceeeec-ccccH----HHHHHHHHHcCCcEEEEec
Confidence 33332222211 10 00000011122111 000 000111222221 11111 2233334333344555545
Q ss_pred cCeeEEEecCCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEecCChHHHHHHHHhhcCCCCcee
Q 014608 163 GGMDLDILPQGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMVSNAQEELLQWHAANAKNNPKLT 242 (421)
Q Consensus 163 ~~~~ldI~p~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav~NA~~elk~~a~~v~~~~~~~~ 242 (421)
..++|+.|+++|||.|++++++++ |++++++++|||+.||++||+.+| ++|||+||.+++|+.|++++.+|+
T Consensus 146 -~~~~ei~~~~~~Kg~al~~l~~~~---~i~~~~~i~~GD~~NDi~m~~~ag-~~vam~Na~~~vk~~a~~v~~~n~--- 217 (230)
T PRK01158 146 -GFAIHIKSPGVNKGTGLKKLAELM---GIDPEEVAAIGDSENDLEMFEVAG-FGVAVANADEELKEAADYVTEKSY--- 217 (230)
T ss_pred -ceEEEEeeCCCChHHHHHHHHHHh---CCCHHHEEEECCchhhHHHHHhcC-ceEEecCccHHHHHhcceEecCCC---
Confidence 468999999999999999999999 999999999999999999999999 899999999999999999887764
Q ss_pred eccCCCccHHHHHHHHhhC
Q 014608 243 HATERCAAGIIQAIGHFKL 261 (421)
Q Consensus 243 ~~~~~~~~GV~~~l~~~~l 261 (421)
++||+++|++|+|
T Consensus 218 ------~~Gv~~~l~~~~~ 230 (230)
T PRK01158 218 ------GEGVAEAIEHLLL 230 (230)
T ss_pred ------cChHHHHHHHHhC
Confidence 9999999999875
No 11
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=100.00 E-value=2.9e-33 Score=261.30 Aligned_cols=221 Identities=32% Similarity=0.503 Sum_probs=151.8
Q ss_pred EEEeCCCCCCCCCCCCCccHHHHHHHHHHHHcCCcEEEEEcCCCHHHHHHHHHhCCCCCCCEEEEccCcEEEeCCccCCc
Q 014608 12 IVSDLDHTMVDHHDAENLSLLRFNALWEAHYRRDSLLVFSTGRSPTLYKQLRKEKPMLTPDITIMSVGTEITYGDAMVPD 91 (421)
Q Consensus 12 I~~DLDGTLl~~~~~~~~s~~~~~al~~~l~~~g~~vviaTGRs~~~~~~l~~~~~~~~~d~~I~~nGa~I~~~~~~~~~ 91 (421)
|+|||||||++++.. ++....++|. +++++|+.+++||||++..+..+.+.++. ++++|+.||+.|++.+...
T Consensus 1 i~~DlDGTLl~~~~~--i~~~~~~al~-~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~--~~~~i~~nGa~i~~~~~~~-- 73 (225)
T TIGR01482 1 IASDIDGTLTDPNRA--INESALEAIR-KAESVGIPVVLVTGNSVQFARALAKLIGT--PDPVIAENGGEISYNEGMD-- 73 (225)
T ss_pred CeEeccCccCCCCcc--cCHHHHHHHH-HHHHCCCEEEEEcCCchHHHHHHHHHhCC--CCeEEEecCcEEEeCCCCc--
Confidence 689999999998753 4445566665 68899999999999999999999998884 5679999999998754210
Q ss_pred ccHHHHHhchhhhhHHHHHhhcCCCCcccCCcCCCceEEEEEEcccchHHHHHHHHHHHHhcCCcEEEEEEcCeeEEEec
Q 014608 92 NGWVEVLNQKWDKKIVTEEASRFPELKLQSETEQRPHKVSFYVDKDKAQTVTQKLSEIFKNRGLDVKIIYSGGMDLDILP 171 (421)
Q Consensus 92 ~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~s~~~~ldI~p 171 (421)
..+...+...|...........+..+...........++....+ .+....+.+.+ +..+.+. ++..++||+|
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~---~~~~~~~-~~~~~~ei~~ 145 (225)
T TIGR01482 74 DIFLAYLEEEWFLDIVIAKTFPFSRLKVQYPRRASLVKMRYGID----VDTVREIIKEL---GLNLVAV-DSGFDIHILP 145 (225)
T ss_pred eEEecccCHHHHHHHHHhcccchhhhccccccccceEEEeecCC----HHHHHHHHHhc---CceEEEe-cCCcEEEEee
Confidence 01111111111111111110111111111111122233322211 12223333333 3334433 5567999999
Q ss_pred CCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEecCChHHHHHHHHhhcCCCCceeeccCCCccH
Q 014608 172 QGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMVSNAQEELLQWHAANAKNNPKLTHATERCAAG 251 (421)
Q Consensus 172 ~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav~NA~~elk~~a~~v~~~~~~~~~~~~~~~~G 251 (421)
++++||.|++++++++ |++++++++|||+.||++||+.+| ++|||+||.+++|++|++++.+|. ++|
T Consensus 146 ~~~~K~~~i~~l~~~~---~i~~~~~i~~GD~~NDi~m~~~ag-~~vam~Na~~~~k~~A~~vt~~~~---------~~G 212 (225)
T TIGR01482 146 QGVNKGVAVKKLKEKL---GIKPGETLVCGDSENDIDLFEVPG-FGVAVANAQPELKEWADYVTESPY---------GEG 212 (225)
T ss_pred CCCCHHHHHHHHHHHh---CCCHHHEEEECCCHhhHHHHHhcC-ceEEcCChhHHHHHhcCeecCCCC---------CCc
Confidence 9999999999999999 999999999999999999999999 899999999999999999988764 889
Q ss_pred ----HHHHHHHhh
Q 014608 252 ----IIQAIGHFK 260 (421)
Q Consensus 252 ----V~~~l~~~~ 260 (421)
|+++|++|+
T Consensus 213 ~~~~v~~~l~~~~ 225 (225)
T TIGR01482 213 GAEAIGEILQAIG 225 (225)
T ss_pred HHHHHHHHHHhhC
Confidence 999988863
No 12
>PLN02887 hydrolase family protein
Probab=100.00 E-value=3.4e-33 Score=290.52 Aligned_cols=237 Identities=20% Similarity=0.281 Sum_probs=166.4
Q ss_pred cCCCeEEEEeCCCCCCCCCCCCCccHHHHHHHHHHHHcCCcEEEEEcCCCHHHHHHHHHhCCCCCCC-------EEEEcc
Q 014608 6 AAARLMIVSDLDHTMVDHHDAENLSLLRFNALWEAHYRRDSLLVFSTGRSPTLYKQLRKEKPMLTPD-------ITIMSV 78 (421)
Q Consensus 6 ~~~~klI~~DLDGTLl~~~~~~~~s~~~~~al~~~l~~~g~~vviaTGRs~~~~~~l~~~~~~~~~d-------~~I~~n 78 (421)
.+++|+|+|||||||++++.. ++..++++|. +++++|+.|++||||++..+..+.+.+++..++ ++|+.|
T Consensus 305 ~~~iKLIa~DLDGTLLn~d~~--Is~~t~eAI~-kl~ekGi~~vIATGR~~~~i~~~l~~L~l~~~~~~I~~~~p~I~~N 381 (580)
T PLN02887 305 KPKFSYIFCDMDGTLLNSKSQ--ISETNAKALK-EALSRGVKVVIATGKARPAVIDILKMVDLAGKDGIISESSPGVFLQ 381 (580)
T ss_pred ccCccEEEEeCCCCCCCCCCc--cCHHHHHHHH-HHHHCCCeEEEEcCCCHHHHHHHHHHhCcccccceEeecccEEeec
Confidence 346899999999999998653 5666777877 688999999999999999999999888764333 355679
Q ss_pred CcEEEe-CCccCCc-----ccHHHHHh---c-h-----hhhh--------HHHHHh-hcC--CCCccc---CC--cCCCc
Q 014608 79 GTEITY-GDAMVPD-----NGWVEVLN---Q-K-----WDKK--------IVTEEA-SRF--PELKLQ---SE--TEQRP 127 (421)
Q Consensus 79 Ga~I~~-~~~~~~~-----~~~~~~l~---~-~-----~~~~--------~~~~~~-~~~--~~l~~~---~~--~~~~~ 127 (421)
|+.|++ .+..+.. +...+++. . . +..+ ...... ..+ +..... .. .....
T Consensus 382 GA~I~d~~g~~I~~~~L~~e~v~eIi~~~~~~~i~~~~~~~d~~y~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~i 461 (580)
T PLN02887 382 GLLVYGRQGREIYRSNLDQEVCREACLYSLEHKIPLIAFSQDRCLTLFDHPLVDSLHTIYHEPKAEIMSSVDQLLAAADI 461 (580)
T ss_pred CeEEEECCCcEEEEEeCCHHHHHHHHHHHHHcCCeEEEEECCeEEEecCchHHHHHHHhhccccccccCCHHHhhcccCe
Confidence 999985 3332221 12222221 1 0 0000 000000 001 000000 00 11245
Q ss_pred eEEEEEEcccc-hHHHHHHHHHHHHhcCCcEEEEEEcCeeEEEecCCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCc
Q 014608 128 HKVSFYVDKDK-AQTVTQKLSEIFKNRGLDVKIIYSGGMDLDILPQGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGND 206 (421)
Q Consensus 128 ~ki~~~~~~~~-~~~~~~~l~~~l~~~~~~~~v~~s~~~~ldI~p~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~ND 206 (421)
.|+.++..++. .....+.+.+.+ +..+.++.++..++||+|+++|||.||++|++++ ||+++++++|||+.||
T Consensus 462 ~Ki~~~~~~e~~~~~l~~~l~~~~---~~~~~v~~S~~~~lEI~p~gvSKG~ALk~L~e~l---GI~~eeviAFGDs~ND 535 (580)
T PLN02887 462 QKVIFLDTAEGVSSVLRPYWSEAT---GDRANVVQAQPDMLEIVPPGTSKGNGVKMLLNHL---GVSPDEIMAIGDGEND 535 (580)
T ss_pred eEEEEEcChHHHHHHHHHHHHHHh---cCcEEEEEecCcEEEEecCCCCHHHHHHHHHHHc---CCCHHHEEEEecchhh
Confidence 66665543221 122223333333 2357888888889999999999999999999999 9999999999999999
Q ss_pred hhhhcCCCceEEEecCChHHHHHHHHhhcCCCCceeeccCCCccHHHHHHHHhhC
Q 014608 207 AELFSIPEVYGVMVSNAQEELLQWHAANAKNNPKLTHATERCAAGIIQAIGHFKL 261 (421)
Q Consensus 207 i~M~~~agv~gvav~NA~~elk~~a~~v~~~~~~~~~~~~~~~~GV~~~l~~~~l 261 (421)
++||+.+| +||||+||.+++|+.|++|+.+|+ ++||+++|++|.+
T Consensus 536 IeMLe~AG-~gVAMgNA~eeVK~~Ad~VT~sNd---------EDGVA~aLek~~~ 580 (580)
T PLN02887 536 IEMLQLAS-LGVALSNGAEKTKAVADVIGVSND---------EDGVADAIYRYAF 580 (580)
T ss_pred HHHHHHCC-CEEEeCCCCHHHHHhCCEEeCCCC---------cCHHHHHHHHhhC
Confidence 99999999 999999999999999999988764 8999999999864
No 13
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=100.00 E-value=4.4e-33 Score=262.42 Aligned_cols=224 Identities=28% Similarity=0.369 Sum_probs=166.2
Q ss_pred EEEeCCCCCCCCCCCCCccHHHHHHHHHHHHcCCcEEEEEcCCCHHHHHHHHHhCCCCCCCEEEEccCcEEEe-CCccCC
Q 014608 12 IVSDLDHTMVDHHDAENLSLLRFNALWEAHYRRDSLLVFSTGRSPTLYKQLRKEKPMLTPDITIMSVGTEITY-GDAMVP 90 (421)
Q Consensus 12 I~~DLDGTLl~~~~~~~~s~~~~~al~~~l~~~g~~vviaTGRs~~~~~~l~~~~~~~~~d~~I~~nGa~I~~-~~~~~~ 90 (421)
|+|||||||++++.. ++....++|. .++++|+++++||||++..+.++...+++. +++|++||+.|.. .++.+.
T Consensus 1 i~~DlDGTLl~~~~~--i~~~~~~al~-~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~--~~~I~~nGa~i~~~~~~~l~ 75 (254)
T PF08282_consen 1 IFSDLDGTLLNSDGK--ISPETIEALK-ELQEKGIKLVIATGRSYSSIKRLLKELGID--DYFICSNGALIDDPKGKILY 75 (254)
T ss_dssp EEEECCTTTCSTTSS--SCHHHHHHHH-HHHHTTCEEEEECSSTHHHHHHHHHHTTHC--SEEEEGGGTEEEETTTEEEE
T ss_pred cEEEECCceecCCCe--eCHHHHHHHH-hhcccceEEEEEccCcccccccccccccch--hhhcccccceeeecccccch
Confidence 799999999998765 5566677777 588899999999999999999999998864 6799999999933 444332
Q ss_pred cc-----cHHHHHhc----h----------hh--hh---HHHHHhhcCCCCcc-----cCCcCCCceEEEEEEcccchHH
Q 014608 91 DN-----GWVEVLNQ----K----------WD--KK---IVTEEASRFPELKL-----QSETEQRPHKVSFYVDKDKAQT 141 (421)
Q Consensus 91 ~~-----~~~~~l~~----~----------~~--~~---~~~~~~~~~~~l~~-----~~~~~~~~~ki~~~~~~~~~~~ 141 (421)
.. .+..++.. . +. .. .............. .......+.|+.+..+.+....
T Consensus 76 ~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~ 155 (254)
T PF08282_consen 76 EKPIDSDDVKKILKYLKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQ 155 (254)
T ss_dssp EESB-HHHHHHHHHHHHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHH
T ss_pred hhheeccchhheeehhhhcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhh
Confidence 22 22222221 0 00 00 00000011111110 0123456788886666556666
Q ss_pred HHHHHHHHHHhcCCcEEEEEEcCeeEEEecCCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEec
Q 014608 142 VTQKLSEIFKNRGLDVKIIYSGGMDLDILPQGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMVS 221 (421)
Q Consensus 142 ~~~~l~~~l~~~~~~~~v~~s~~~~ldI~p~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav~ 221 (421)
+.+.+.+.+.. .+.++.++..++||+|+++|||.|+++|++++ |++++++++||||.||++||+.+| +||||+
T Consensus 156 l~~~l~~~~~~---~~~~~~~~~~~lei~~~~vsK~~ai~~l~~~~---~i~~~~~~~~GD~~ND~~Ml~~~~-~~~am~ 228 (254)
T PF08282_consen 156 LREELKKKFPN---LIDVVRSSPYFLEITPKGVSKGSAIKYLLEYL---GISPEDIIAFGDSENDIEMLELAG-YSVAMG 228 (254)
T ss_dssp HHHHHHHHHTT---TEEEEEEETTEEEEEETTSSHHHHHHHHHHHH---TTSGGGEEEEESSGGGHHHHHHSS-EEEEET
T ss_pred hhhhhccccCc---ceeEEEecccceEEeeCCCCHHHHHHHHhhhc---ccccceeEEeecccccHhHHhhcC-eEEEEc
Confidence 66677776653 35777888999999999999999999999999 999999999999999999999999 999999
Q ss_pred CChHHHHHHHHhhcCCCCceeeccCCCccHHHHHH
Q 014608 222 NAQEELLQWHAANAKNNPKLTHATERCAAGIIQAI 256 (421)
Q Consensus 222 NA~~elk~~a~~v~~~~~~~~~~~~~~~~GV~~~l 256 (421)
||.+++|+.|++++++++ .+||+++|
T Consensus 229 na~~~~k~~a~~i~~~~~---------~~gv~~~i 254 (254)
T PF08282_consen 229 NATPELKKAADYITPSNN---------DDGVAKAI 254 (254)
T ss_dssp TS-HHHHHHSSEEESSGT---------CTHHHHHH
T ss_pred CCCHHHHHhCCEEecCCC---------CChHHHhC
Confidence 999999999999888764 69999986
No 14
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=100.00 E-value=4.3e-33 Score=267.58 Aligned_cols=232 Identities=18% Similarity=0.206 Sum_probs=158.9
Q ss_pred CCeEEEEeCCCCCCCCCCCCCccHHHHHHHHHHHHcCCcEEEEEcCCCHHHHHHHHHhCCCCCCCEEEEccCcEEEe--C
Q 014608 8 ARLMIVSDLDHTMVDHHDAENLSLLRFNALWEAHYRRDSLLVFSTGRSPTLYKQLRKEKPMLTPDITIMSVGTEITY--G 85 (421)
Q Consensus 8 ~~klI~~DLDGTLl~~~~~~~~s~~~~~al~~~l~~~g~~vviaTGRs~~~~~~l~~~~~~~~~d~~I~~nGa~I~~--~ 85 (421)
++|+|+|||||||++++.. ++..+.++|. +++++|+.|++||||++..+.++.+.+++.. ++|++||+.|++ +
T Consensus 2 ~~kli~~DlDGTLl~~~~~--i~~~~~~ai~-~~~~~G~~~~iaTGR~~~~~~~~~~~l~~~~--~~I~~NGa~i~d~~~ 76 (272)
T PRK10530 2 TYRVIALDLDGTLLTPKKT--ILPESLEALA-RAREAGYKVIIVTGRHHVAIHPFYQALALDT--PAICCNGTYLYDYQA 76 (272)
T ss_pred CccEEEEeCCCceECCCCc--cCHHHHHHHH-HHHHCCCEEEEEcCCChHHHHHHHHhcCCCC--CEEEcCCcEEEecCC
Confidence 4799999999999988753 4556677777 6889999999999999999999999888643 489999999996 3
Q ss_pred CccCCcc-----cHHHH---Hhc-hh-----------hhh---HHHHHh---hcCCC-----CcccCC------cCCCce
Q 014608 86 DAMVPDN-----GWVEV---LNQ-KW-----------DKK---IVTEEA---SRFPE-----LKLQSE------TEQRPH 128 (421)
Q Consensus 86 ~~~~~~~-----~~~~~---l~~-~~-----------~~~---~~~~~~---~~~~~-----l~~~~~------~~~~~~ 128 (421)
+.++... ...++ +.+ .. ... .+.... ..++. ...... ......
T Consensus 77 ~~~l~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (272)
T PRK10530 77 KKVLEADPLPVQQALQVIEMLDEHQIHGLMYVDDAMLYEHPTGHVIRTLNWAQTLPPEQRPTFTQVDSLAQAARQVNAIW 156 (272)
T ss_pred CEEEEecCCCHHHHHHHHHHHHhCCcEEEEEcCCceEecCchHHHHHHhhhhhccchhcccceEEcccHHHHHhhcCCcE
Confidence 4433221 12222 211 00 000 000000 00000 000000 011233
Q ss_pred EEEEEEcccchHHHHHHHHHHHHhcCCcEEEEEEcCeeEEEecCCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchh
Q 014608 129 KVSFYVDKDKAQTVTQKLSEIFKNRGLDVKIIYSGGMDLDILPQGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAE 208 (421)
Q Consensus 129 ki~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~s~~~~ldI~p~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~ 208 (421)
++..... ..+. .+.+.+.+.+. ..+.++.++..++|++|++++||.|++.+++++ |++++++++|||+.||++
T Consensus 157 ~i~~~~~--~~~~-~~~~~~~~~~~-~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~---gi~~~e~i~~GD~~NDi~ 229 (272)
T PRK10530 157 KFALTHE--DLPQ-LQHFAKHVEHE-LGLECEWSWHDQVDIARKGNSKGKRLTQWVEAQ---GWSMKNVVAFGDNFNDIS 229 (272)
T ss_pred EEEEecC--CHHH-HHHHHHHHhhh-cCceEEEecCceEEEecCCCChHHHHHHHHHHc---CCCHHHeEEeCCChhhHH
Confidence 4332221 1111 22233333221 234555666678999999999999999999999 999999999999999999
Q ss_pred hhcCCCceEEEecCChHHHHHHHHhhcCCCCceeeccCCCccHHHHHHHHhhC
Q 014608 209 LFSIPEVYGVMVSNAQEELLQWHAANAKNNPKLTHATERCAAGIIQAIGHFKL 261 (421)
Q Consensus 209 M~~~agv~gvav~NA~~elk~~a~~v~~~~~~~~~~~~~~~~GV~~~l~~~~l 261 (421)
||+.+| +||+|+||.+++|+.|++++.+|+ ++||+++|++++|
T Consensus 230 m~~~ag-~~vamgna~~~lk~~Ad~v~~~n~---------~dGv~~~l~~~~l 272 (272)
T PRK10530 230 MLEAAG-LGVAMGNADDAVKARADLVIGDNT---------TPSIAEFIYSHVL 272 (272)
T ss_pred HHHhcC-ceEEecCchHHHHHhCCEEEecCC---------CCcHHHHHHHHhC
Confidence 999999 899999999999999988887764 8999999999864
No 15
>COG4460 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=100.00 E-value=1.1e-33 Score=222.49 Aligned_cols=121 Identities=17% Similarity=0.254 Sum_probs=113.8
Q ss_pred hHHHHHHHHHHHHhcccccCCHHHHHHHHhccCCCceEeCCCCcccCHHHHHHHHHhhcCCCCCceEEEEEeeeEEeeee
Q 014608 285 HEVVKLYLFYERWRRAEIDNSEIYLSSLKANCCPSGFCVPPSGGEISLAEAINQFRKCYGDKQGKQFRVWVDRVLSTEIG 364 (421)
Q Consensus 285 ~evv~~~~~~e~w~~~~~~~~~~~~~~l~~~~~p~~~~v~~~G~~~~~~~~~~~~~~~~g~~~g~~~~i~vd~~~~~~~~ 364 (421)
.||+.+|.+|++||.+ .....++.|.++|..+||||+|+|+.||+.+++++||+++|.+|| |+|.|+.+++.+.+
T Consensus 7 ~EiihaH~ai~dWl~~---~~adtldal~arfaedftMitP~GviLD~~Alg~~frs~racrpG--l~I~ie~i~l~a~~ 81 (130)
T COG4460 7 AEIIHAHRAIVDWLVA---ARADTLDALRARFAEDFTMITPSGVILDRDALGDHFRSSRACRPG--LAISIEDIRLGAQT 81 (130)
T ss_pred HHHHHHHHHHHHHHHh---cccccHHHHHHHHhcCceEecCCceEeccHHHHHHHHhccCCCCC--eEEEEecccccccC
Confidence 6999999999999997 446689999999999999999999999999999999999999999 99999999999999
Q ss_pred CCeEEEEEeeeEEe--CcceeeEEEEEEEEEeCCCCeeEEEeeeeccc
Q 014608 365 PGTWLVKFHKWELS--GEERACSIVSIIVRIKDASDHTYMHVHETWLE 410 (421)
Q Consensus 365 ~~~~~v~~~~~~~~--~~~~~~~~~t~~~~~~~~~~~~w~h~het~~~ 410 (421)
+|++++.|+|.|+. |..++.|+||+++.+.+|+++.||||||||++
T Consensus 82 ~dga~l~YrE~Q~~a~g~se~~r~stv~l~r~~~grv~WRHLhET~~~ 129 (130)
T COG4460 82 EDGAVLLYREAQLRAGGHSERQRSSTVTLSRSAPGRVEWRHLHETWLQ 129 (130)
T ss_pred CCceeeeehHhhhhccCccceeeeeEEEEeecCCCceEeeehhhhhhc
Confidence 99999999999977 45566699999999988999999999999986
No 16
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.98 E-value=1e-31 Score=258.31 Aligned_cols=231 Identities=18% Similarity=0.209 Sum_probs=152.7
Q ss_pred cCCCeEEEEeCCCCCCCCCCCCCccHHHHHHHHHHHHcCCcEEEEEcCCCHHHHHHHHHhCCCCCCCEEEEccCcEEEeC
Q 014608 6 AAARLMIVSDLDHTMVDHHDAENLSLLRFNALWEAHYRRDSLLVFSTGRSPTLYKQLRKEKPMLTPDITIMSVGTEITYG 85 (421)
Q Consensus 6 ~~~~klI~~DLDGTLl~~~~~~~~s~~~~~al~~~l~~~g~~vviaTGRs~~~~~~l~~~~~~~~~d~~I~~nGa~I~~~ 85 (421)
-..+++|++||||||++++.. ++..+.++|. +++++|++|++||||++..+.++.+.+++. ..++|++||+.|+..
T Consensus 4 ~~~~~lI~~DlDGTLL~~~~~--i~~~~~~ai~-~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~-~~~~I~~NGa~I~~~ 79 (271)
T PRK03669 4 LQDPLLIFTDLDGTLLDSHTY--DWQPAAPWLT-RLREAQVPVILCSSKTAAEMLPLQQTLGLQ-GLPLIAENGAVIQLD 79 (271)
T ss_pred cCCCeEEEEeCccCCcCCCCc--CcHHHHHHHH-HHHHcCCeEEEEcCCCHHHHHHHHHHhCCC-CCcEEEeCCCEEEec
Confidence 346899999999999987542 4445667766 688999999999999999999999998863 236899999999874
Q ss_pred Cc-------cC-----CcccHHHHHh---chhhhhH--H----HHHhhcCCCCcc----cCCcCCCceEEEEEEcccchH
Q 014608 86 DA-------MV-----PDNGWVEVLN---QKWDKKI--V----TEEASRFPELKL----QSETEQRPHKVSFYVDKDKAQ 140 (421)
Q Consensus 86 ~~-------~~-----~~~~~~~~l~---~~~~~~~--~----~~~~~~~~~l~~----~~~~~~~~~ki~~~~~~~~~~ 140 (421)
.. .+ +.....+.++ +.+.... . ......+..... .........++.+... .
T Consensus 80 ~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 155 (271)
T PRK03669 80 EQWQDHPDFPRIISGISHGEIRQVLNTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRDS----D 155 (271)
T ss_pred CcccCCCCceEeecCCCHHHHHHHHHHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecCC----H
Confidence 21 01 1111122221 1100000 0 000000001110 0011111233333222 1
Q ss_pred HHHHHHHHHHHhcCCcEEEEEEcCeeEEEecCCCCHHHHHHHHHHHHhhCCC---CCCcEEEEcCCcCchhhhcCCCceE
Q 014608 141 TVTQKLSEIFKNRGLDVKIIYSGGMDLDILPQGAGKGQALAYLLRKFKCEGK---VPTNTLVCGDSGNDAELFSIPEVYG 217 (421)
Q Consensus 141 ~~~~~l~~~l~~~~~~~~v~~s~~~~ldI~p~g~sKg~al~~L~~~l~~~gi---~~~~vl~~GDs~NDi~M~~~agv~g 217 (421)
+....+.+.+... .+.++.+ +.++||+|+++|||.|+++|++++ |+ +++++++||||.||++||+.+| +|
T Consensus 156 ~~~~~~~~~l~~~--~~~~~~~-~~~iEi~~~g~sKg~al~~l~~~l---gi~~~~~~~viafGDs~NDi~Ml~~ag-~g 228 (271)
T PRK03669 156 ERMAQFTARLAEL--GLQFVQG-ARFWHVLDASAGKDQAANWLIATY---QQLSGTRPTTLGLGDGPNDAPLLDVMD-YA 228 (271)
T ss_pred HHHHHHHHHHHHC--CCEEEec-CeeEEEecCCCCHHHHHHHHHHHH---HhhcCCCceEEEEcCCHHHHHHHHhCC-EE
Confidence 2234455555432 3555544 468999999999999999999999 99 9999999999999999999999 99
Q ss_pred EEecCChHH---H---HHHHHhhcCCCCceeeccCCCccHHHHHHHHhh
Q 014608 218 VMVSNAQEE---L---LQWHAANAKNNPKLTHATERCAAGIIQAIGHFK 260 (421)
Q Consensus 218 vav~NA~~e---l---k~~a~~v~~~~~~~~~~~~~~~~GV~~~l~~~~ 260 (421)
|||+|+.++ | ++.++ |++++++++||.++|+||+
T Consensus 229 vAM~~~~~~~~~l~~~~~~~~---------~~~~~~~~~g~~~~l~~~~ 268 (271)
T PRK03669 229 VVVKGLNREGVHLQDDDPARV---------YRTQREGPEGWREGLDHFF 268 (271)
T ss_pred EEecCCCCCCcccccccCCce---------EeccCCCcHHHHHHHHHHH
Confidence 999988732 3 22333 4455567999999999986
No 17
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=99.97 E-value=8.2e-31 Score=243.54 Aligned_cols=213 Identities=22% Similarity=0.334 Sum_probs=149.0
Q ss_pred CeEEEEeCCCCCCCCCCCCCccHHHHHHHHHHHHcCCcEEEEEcCCCHHHHHHHHHhCCCCCCCEEEEccCcEEEeCCcc
Q 014608 9 RLMIVSDLDHTMVDHHDAENLSLLRFNALWEAHYRRDSLLVFSTGRSPTLYKQLRKEKPMLTPDITIMSVGTEITYGDAM 88 (421)
Q Consensus 9 ~klI~~DLDGTLl~~~~~~~~s~~~~~al~~~l~~~g~~vviaTGRs~~~~~~l~~~~~~~~~d~~I~~nGa~I~~~~~~ 88 (421)
+|+|+|||||||++++.. ++....+++. +++++|+.++++|||++..+..+.+.+++. .++|++||+.|++.+..
T Consensus 1 ik~v~~DlDGTLl~~~~~--i~~~~~~~i~-~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~--~~~i~~NGa~i~~~~~~ 75 (215)
T TIGR01487 1 IKLVAIDIDGTLTEPNRM--ISERAIEAIR-KAEKKGIPVSLVTGNTVPFARALAVLIGTS--GPVVAENGGVIFYNKED 75 (215)
T ss_pred CcEEEEecCCCcCCCCcc--cCHHHHHHHH-HHHHCCCEEEEEcCCcchhHHHHHHHhCCC--CcEEEccCcEEEeCCCc
Confidence 479999999999987653 4555667776 688999999999999999999999888753 35899999999985421
Q ss_pred CC-cccHHH-HHhchhhhhHHHHHhhcCCCCcccCCcCCCceEEEEEEcccchHHHHHHHHHHHHhcCCcEEEEEEcCee
Q 014608 89 VP-DNGWVE-VLNQKWDKKIVTEEASRFPELKLQSETEQRPHKVSFYVDKDKAQTVTQKLSEIFKNRGLDVKIIYSGGMD 166 (421)
Q Consensus 89 ~~-~~~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~s~~~~ 166 (421)
+. ...... +..... . ..++.-.... .....++.+....... +.+.+.+... .+.++.+ +..
T Consensus 76 ~~~~~~~~~~~~~~~~------~--~~~~~~~~~~--~~~~~~~~~~~~~~~~----~~~~~~l~~~--~~~~~~~-~~~ 138 (215)
T TIGR01487 76 IFLANMEEEWFLDEEK------K--KRFPRDRLSN--EYPRASLVIMREGKDV----DEVREIIKER--GLNLVDS-GFA 138 (215)
T ss_pred EEEecccchhhHHHhh------h--hhhhhhhccc--ccceeEEEEecCCccH----HHHHHHHHhC--CeEEEec-Cce
Confidence 11 100000 010000 0 0000000000 0001122222222222 3334444432 3555544 578
Q ss_pred EEEecCCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEecCChHHHHHHHHhhcCCCCceeeccC
Q 014608 167 LDILPQGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMVSNAQEELLQWHAANAKNNPKLTHATE 246 (421)
Q Consensus 167 ldI~p~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav~NA~~elk~~a~~v~~~~~~~~~~~~ 246 (421)
+||.|.+++||.|++++++++ |++++++++||||.||++||+.+| ++|||+||.+++|++|++++.+|
T Consensus 139 ~ei~~~~~~K~~~i~~l~~~~---~i~~~~~i~iGDs~ND~~ml~~ag-~~vam~na~~~~k~~A~~v~~~~-------- 206 (215)
T TIGR01487 139 IHIMKKGVDKGVGVEKLKELL---GIKPEEVAAIGDSENDIDLFRVVG-FKVAVANADDQLKEIADYVTSNP-------- 206 (215)
T ss_pred EEEecCCCChHHHHHHHHHHh---CCCHHHEEEECCCHHHHHHHHhCC-CeEEcCCccHHHHHhCCEEcCCC--------
Confidence 999999999999999999999 999999999999999999999999 99999999999999999888765
Q ss_pred CCccHHHHHH
Q 014608 247 RCAAGIIQAI 256 (421)
Q Consensus 247 ~~~~GV~~~l 256 (421)
+++||+++|
T Consensus 207 -~~~Gv~~~l 215 (215)
T TIGR01487 207 -YGEGVVEVL 215 (215)
T ss_pred -CCchhhhhC
Confidence 489999875
No 18
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=99.97 E-value=1.8e-30 Score=247.55 Aligned_cols=224 Identities=23% Similarity=0.284 Sum_probs=155.0
Q ss_pred EEEEeCCCCCCCCCCCCCccHHHHHHHHHHHHcCCcEEEEEcCCCHHHHHHHHHhCCCCCCCEEEEccCcEEEeC-CccC
Q 014608 11 MIVSDLDHTMVDHHDAENLSLLRFNALWEAHYRRDSLLVFSTGRSPTLYKQLRKEKPMLTPDITIMSVGTEITYG-DAMV 89 (421)
Q Consensus 11 lI~~DLDGTLl~~~~~~~~s~~~~~al~~~l~~~g~~vviaTGRs~~~~~~l~~~~~~~~~d~~I~~nGa~I~~~-~~~~ 89 (421)
+|+|||||||++++.. ++....+++. +++++|+.++++|||++..+..+.+.+++. .++|++||+.|++. ++.+
T Consensus 1 li~~DlDGTLl~~~~~--i~~~~~~~i~-~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~--~~~I~~NGa~i~~~~~~~i 75 (256)
T TIGR00099 1 LIFIDLDGTLLNDDHT--ISPSTKEALA-KLREKGIKVVLATGRPYKEVKNILKELGLD--TPFITANGAAVIDDQGEIL 75 (256)
T ss_pred CEEEeCCCCCCCCCCc--cCHHHHHHHH-HHHHCCCeEEEEeCCCHHHHHHHHHHcCCC--CCEEEcCCcEEECCCCCEE
Confidence 5899999999998653 4555666776 688999999999999999999999888753 26899999999975 3433
Q ss_pred Ccc-----cHHHHHh---c-hh-----hhh-HH--------HHH-hhcC-CCCc-ccC--Cc-CCCceEEEEEEcccchH
Q 014608 90 PDN-----GWVEVLN---Q-KW-----DKK-IV--------TEE-ASRF-PELK-LQS--ET-EQRPHKVSFYVDKDKAQ 140 (421)
Q Consensus 90 ~~~-----~~~~~l~---~-~~-----~~~-~~--------~~~-~~~~-~~l~-~~~--~~-~~~~~ki~~~~~~~~~~ 140 (421)
... .+.++++ + .. ..+ .+ ... ...+ .... ..+ .. .....++.+..+.+..
T Consensus 76 ~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 154 (256)
T TIGR00099 76 YKKPLDLDLVEEILNFLKKHGLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPDDILKILLLFLDPEDL- 154 (256)
T ss_pred eecCCCHHHHHHHHHHHHHcCcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhcccceEEEEECCHHHH-
Confidence 222 2222221 1 00 000 00 000 0000 0000 000 01 1123333333332222
Q ss_pred HHHHHHHHHHHh--cCCcEEEEEEcCeeEEEecCCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEE
Q 014608 141 TVTQKLSEIFKN--RGLDVKIIYSGGMDLDILPQGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGV 218 (421)
Q Consensus 141 ~~~~~l~~~l~~--~~~~~~v~~s~~~~ldI~p~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gv 218 (421)
+.+.+.+.+ ....+.++.++..++||+|+++|||.|++++++++ |++++++++||||.||++||+.+| ++|
T Consensus 155 ---~~~~~~~~~~~~~~~~~~~~s~~~~leI~~~~~~K~~~i~~~~~~~---~~~~~~~~~~GD~~nD~~m~~~~~-~~~ 227 (256)
T TIGR00099 155 ---DLLIEALNKLELEENVSVVSSGPYSIEITAKGVSKGSALQSLAEAL---GISLEDVIAFGDGMNDIEMLEAAG-YGV 227 (256)
T ss_pred ---HHHHHHhhhhhhcCCEEEEEecCceEEecCCCCChHHHHHHHHHHc---CCCHHHEEEeCCcHHhHHHHHhCC-cee
Confidence 333333331 22457777888899999999999999999999999 999999999999999999999999 899
Q ss_pred EecCChHHHHHHHHhhcCCCCceeeccCCCccHHHHHH
Q 014608 219 MVSNAQEELLQWHAANAKNNPKLTHATERCAAGIIQAI 256 (421)
Q Consensus 219 av~NA~~elk~~a~~v~~~~~~~~~~~~~~~~GV~~~l 256 (421)
||+||.+++|+.|++++.+|+ ++||+++|
T Consensus 228 a~~na~~~~k~~a~~~~~~n~---------~dGV~~~l 256 (256)
T TIGR00099 228 AMGNADEELKALADYVTDSNN---------EDGVALAL 256 (256)
T ss_pred EecCchHHHHHhCCEEecCCC---------CcchhhhC
Confidence 999999999999998887764 89999875
No 19
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=99.97 E-value=1.5e-29 Score=241.29 Aligned_cols=224 Identities=18% Similarity=0.193 Sum_probs=151.1
Q ss_pred EEEEeCCCCCCCCCCCCCccHHHHHHHHHHHHcCCcEEEEEcCCCHHHHHHHHHhCCCCCCCEEEEccCcEEEeCCc--c
Q 014608 11 MIVSDLDHTMVDHHDAENLSLLRFNALWEAHYRRDSLLVFSTGRSPTLYKQLRKEKPMLTPDITIMSVGTEITYGDA--M 88 (421)
Q Consensus 11 lI~~DLDGTLl~~~~~~~~s~~~~~al~~~l~~~g~~vviaTGRs~~~~~~l~~~~~~~~~d~~I~~nGa~I~~~~~--~ 88 (421)
+|++||||||++++... .+ ...+++. +++++|+.++++|||++..+..+.+.+++ ++++|++||+.|++.+. .
T Consensus 1 li~~DlDGTll~~~~~~-~~-~~~~~i~-~l~~~g~~~~~~TgR~~~~~~~~~~~~~~--~~~~I~~NGa~i~~~~~~~~ 75 (256)
T TIGR01486 1 WIFTDLDGTLLDPHGYD-WG-PAKEVLE-RLQELGIPVIPCTSKTAAEVEYLRKELGL--EDPFIVENGGAIYGPRGWFT 75 (256)
T ss_pred CEEEcCCCCCcCCCCcC-ch-HHHHHHH-HHHHCCCeEEEEcCCCHHHHHHHHHHcCC--CCcEEEcCCeEEEeCCCccc
Confidence 58999999999887522 22 3455665 68899999999999999999999999886 36799999999997432 1
Q ss_pred -----CCc-----ccHHHHHh---chhhhh--HH----HHHhhcCCCCccc--C-CcCCCceEEEEEEcccchHHHHHHH
Q 014608 89 -----VPD-----NGWVEVLN---QKWDKK--IV----TEEASRFPELKLQ--S-ETEQRPHKVSFYVDKDKAQTVTQKL 146 (421)
Q Consensus 89 -----~~~-----~~~~~~l~---~~~~~~--~~----~~~~~~~~~l~~~--~-~~~~~~~ki~~~~~~~~~~~~~~~l 146 (421)
+.. ....+.++ +..... .+ ......+..++.. . .......++.+. .. +....+
T Consensus 76 ~~~~~~~~~~i~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~ 150 (256)
T TIGR01486 76 EPEYPVIALGIPYEKIRARLEELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETILW-SE----ERRERF 150 (256)
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCceec-Ch----HHHHHH
Confidence 111 11122221 100000 00 0000001111110 0 001123344333 32 223445
Q ss_pred HHHHHhcCCcEEEEEEcCeeEEEecCCCCHHHHHHHHHHHHhhCCCC--CCcEEEEcCCcCchhhhcCCCceEEEecCCh
Q 014608 147 SEIFKNRGLDVKIIYSGGMDLDILPQGAGKGQALAYLLRKFKCEGKV--PTNTLVCGDSGNDAELFSIPEVYGVMVSNAQ 224 (421)
Q Consensus 147 ~~~l~~~~~~~~v~~s~~~~ldI~p~g~sKg~al~~L~~~l~~~gi~--~~~vl~~GDs~NDi~M~~~agv~gvav~NA~ 224 (421)
.+.+.+. .+.++.+ ..++||+|++++||.|+++|++++ |++ .+++++||||.||++||+.+| +||||+||.
T Consensus 151 ~~~~~~~--~~~~~~s-~~~~ei~~~~~~Kg~ai~~l~~~~---~i~~~~~~~~a~GD~~ND~~Ml~~ag-~~vam~Na~ 223 (256)
T TIGR01486 151 TEALVEL--GLEVTHG-NRFYHVLGAGSDKGKAANALKQFY---NQPGGAIKVVGLGDSPNDLPLLEVVD-LAVVVPGPN 223 (256)
T ss_pred HHHHHHc--CCEEEeC-CceEEEecCCCCHHHHHHHHHHHH---hhcCCCceEEEEcCCHhhHHHHHHCC-EEEEeCCCC
Confidence 5555443 3555554 469999999999999999999999 999 999999999999999999999 999999998
Q ss_pred ---HHHHHH--H-HhhcCCCCceeeccCCCccHHHHHHHHhh
Q 014608 225 ---EELLQW--H-AANAKNNPKLTHATERCAAGIIQAIGHFK 260 (421)
Q Consensus 225 ---~elk~~--a-~~v~~~~~~~~~~~~~~~~GV~~~l~~~~ 260 (421)
+++|+. | ++++.+| +++||+++|++|+
T Consensus 224 ~~~~~lk~~~~a~~~vt~~~---------~~dGva~~l~~~~ 256 (256)
T TIGR01486 224 GPNVSLKPGDPGSFLLTPAP---------GPEGWREALEHLL 256 (256)
T ss_pred CCccccCccCCCcEEEcCCC---------CcHHHHHHHHHhC
Confidence 589886 4 3676654 5999999999974
No 20
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.96 E-value=6.8e-29 Score=239.04 Aligned_cols=230 Identities=22% Similarity=0.284 Sum_probs=151.9
Q ss_pred CCeEEEEeCCCCCCCCCCCCCccHHHHHHHHHHHHcCCcEEEEEcCCCHHHHHHHHHhCCCCCCCEEEEccCcEEEeCCc
Q 014608 8 ARLMIVSDLDHTMVDHHDAENLSLLRFNALWEAHYRRDSLLVFSTGRSPTLYKQLRKEKPMLTPDITIMSVGTEITYGDA 87 (421)
Q Consensus 8 ~~klI~~DLDGTLl~~~~~~~~s~~~~~al~~~l~~~g~~vviaTGRs~~~~~~l~~~~~~~~~d~~I~~nGa~I~~~~~ 87 (421)
.+|+|++||||||++++.. .+....++|. +++++|+.++++|||++..+..+.+.+++. .++|+.||+.|++.+.
T Consensus 3 ~~kli~~DlDGTLl~~~~~--~~~~~~~ai~-~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~--~~~i~~nGa~i~~~~~ 77 (273)
T PRK00192 3 MKLLVFTDLDGTLLDHHTY--SYEPAKPALK-ALKEKGIPVIPCTSKTAAEVEVLRKELGLE--DPFIVENGAAIYIPKN 77 (273)
T ss_pred cceEEEEcCcccCcCCCCc--CcHHHHHHHH-HHHHCCCEEEEEcCCCHHHHHHHHHHcCCC--CCEEEEcCcEEEeccc
Confidence 4799999999999986543 2333455555 688999999999999999999999998864 3589999999987422
Q ss_pred ---------------cC-----CcccHHHHHh---chhhhhH--H----HHHhhcCCCCccc--CCcCC-CceEEEEEEc
Q 014608 88 ---------------MV-----PDNGWVEVLN---QKWDKKI--V----TEEASRFPELKLQ--SETEQ-RPHKVSFYVD 135 (421)
Q Consensus 88 ---------------~~-----~~~~~~~~l~---~~~~~~~--~----~~~~~~~~~l~~~--~~~~~-~~~ki~~~~~ 135 (421)
.+ +.....+.+. +.+.... + ......+.+++.. ..... ...++.+...
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (273)
T PRK00192 78 YFPFQPDGERLKGDYWVIELGPPYEELREILDEISDELGYPLKGFGDLSAEEVAELTGLSGESARLAKDREFSEPFLWNG 157 (273)
T ss_pred ccccCCccccccCCceEEEcCCCHHHHHHHHHHHHHHhCCCeeehhhCCHHHHHHHhCcCHHHHHHHHhcccCCceeecC
Confidence 11 1111112211 1100000 0 0000001111110 00111 1122222122
Q ss_pred ccchHHHHHHHHHHHHhcCCcEEEEEEcCeeEEEecCCCCHHHHHHHHHHHHhhCCCCC-CcEEEEcCCcCchhhhcCCC
Q 014608 136 KDKAQTVTQKLSEIFKNRGLDVKIIYSGGMDLDILPQGAGKGQALAYLLRKFKCEGKVP-TNTLVCGDSGNDAELFSIPE 214 (421)
Q Consensus 136 ~~~~~~~~~~l~~~l~~~~~~~~v~~s~~~~ldI~p~g~sKg~al~~L~~~l~~~gi~~-~~vl~~GDs~NDi~M~~~ag 214 (421)
. .+..+.+.+.+... .+.+..+ +++++|+|++ +||.|++++++++ |+++ +++++||||.||++||+.+|
T Consensus 158 ~---~~~~~~~~~~l~~~--~~~~~~~-~~~~ei~~~~-~Kg~al~~l~~~~---~i~~~~~v~~~GDs~NDi~m~~~ag 227 (273)
T PRK00192 158 S---EAAKERFEEALKRL--GLKVTRG-GRFLHLLGGG-DKGKAVRWLKELY---RRQDGVETIALGDSPNDLPMLEAAD 227 (273)
T ss_pred c---hHHHHHHHHHHHHc--CCEEEEC-CeEEEEeCCC-CHHHHHHHHHHHH---hccCCceEEEEcCChhhHHHHHhCC
Confidence 1 22335555555443 3454444 6899999999 9999999999999 9999 99999999999999999999
Q ss_pred ceEEEecCChHHHH----HHH-HhhcCCCCceeeccCCCccHHHHHHHHhh
Q 014608 215 VYGVMVSNAQEELL----QWH-AANAKNNPKLTHATERCAAGIIQAIGHFK 260 (421)
Q Consensus 215 v~gvav~NA~~elk----~~a-~~v~~~~~~~~~~~~~~~~GV~~~l~~~~ 260 (421)
++|||+||.+++| ++| +. ++.+.+++++||+++|++++
T Consensus 228 -~~vam~NA~~~~k~~~~~~a~~~-------v~~~~~~~~~Gv~~~l~~~~ 270 (273)
T PRK00192 228 -IAVVVPGPDGPNPPLLPGIADGE-------FILASAPGPEGWAEAINKLL 270 (273)
T ss_pred -eeEEeCCCCCCCcccCccccCCc-------eEEecCCCcHHHHHHHHHHH
Confidence 9999999999999 443 23 34445567999999999874
No 21
>PTZ00174 phosphomannomutase; Provisional
Probab=99.95 E-value=1.7e-27 Score=225.90 Aligned_cols=216 Identities=17% Similarity=0.217 Sum_probs=132.3
Q ss_pred cCCCeEEEEeCCCCCCCCCCCCCccHHHHHHHHHHHHcCCcEEEEEcCCCHHHHHHHHHhCCCCCCCEEEEccCcEEEeC
Q 014608 6 AAARLMIVSDLDHTMVDHHDAENLSLLRFNALWEAHYRRDSLLVFSTGRSPTLYKQLRKEKPMLTPDITIMSVGTEITYG 85 (421)
Q Consensus 6 ~~~~klI~~DLDGTLl~~~~~~~~s~~~~~al~~~l~~~g~~vviaTGRs~~~~~~l~~~~~~~~~d~~I~~nGa~I~~~ 85 (421)
.|++|+|+|||||||++++.. ++....++|. +++++|++|++||||++..+....+.......+++|+.||+.|+..
T Consensus 2 ~~~~klia~DlDGTLL~~~~~--is~~~~~ai~-~l~~~Gi~~viaTGR~~~~i~~~l~~~~~~~~~~~I~~NGa~I~~~ 78 (247)
T PTZ00174 2 EMKKTILLFDVDGTLTKPRNP--ITQEMKDTLA-KLKSKGFKIGVVGGSDYPKIKEQLGEDVLEDFDYVFSENGLVAYKD 78 (247)
T ss_pred CCCCeEEEEECcCCCcCCCCC--CCHHHHHHHH-HHHHCCCEEEEEcCCCHHHHHHHHhhhhhcccCeEEeCCceEEEEC
Confidence 467899999999999998864 4445667776 6889999999999999887665554322122357899999999976
Q ss_pred CccCCcccH---------HHHHhc--hhhhhHHHHH-hhcCCC----Cc---ccCCcCCC--ceEEEEEEc-ccchHHHH
Q 014608 86 DAMVPDNGW---------VEVLNQ--KWDKKIVTEE-ASRFPE----LK---LQSETEQR--PHKVSFYVD-KDKAQTVT 143 (421)
Q Consensus 86 ~~~~~~~~~---------~~~l~~--~~~~~~~~~~-~~~~~~----l~---~~~~~~~~--~~ki~~~~~-~~~~~~~~ 143 (421)
+..+....+ .++++. .......... ...|.. .. ........ ...+..+.. .+...+..
T Consensus 79 ~~~i~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (247)
T PTZ00174 79 GELFHSQSILKFLGEEKLKKFINFCLRYIADLDIPVKRGTFIEYRNGMINISPIGRNCSQEERDEFEKYDKEHHIREKFI 158 (247)
T ss_pred CeEEEEEcchhcCCHHHHHHHHHHHHHHHHhcCCccceeeeEEcCCceEEeccccccCCHHHHHHHHhcCCcchHHHHHH
Confidence 554433322 111110 0000000000 000000 00 00000000 000000111 11122333
Q ss_pred HHHHHHHHhcCCcEEEEEE--cCeeEEEecCCCCHHHHHHHHHHHHhhCCCCCCcEEEEcC----CcCchhhhcCCCceE
Q 014608 144 QKLSEIFKNRGLDVKIIYS--GGMDLDILPQGAGKGQALAYLLRKFKCEGKVPTNTLVCGD----SGNDAELFSIPEVYG 217 (421)
Q Consensus 144 ~~l~~~l~~~~~~~~v~~s--~~~~ldI~p~g~sKg~al~~L~~~l~~~gi~~~~vl~~GD----s~NDi~M~~~agv~g 217 (421)
+.+.+.+. ++.+.++ +..++||+|+++|||.||++|++++ +++++||| +.||++||+.++..|
T Consensus 159 ~~l~~~~~----~~~~~~s~~~~~~leI~~~gvsKg~al~~L~~~~-------~eviafGD~~~~~~NDieMl~~~~~~g 227 (247)
T PTZ00174 159 QDLKKEFS----DLGLKFSIGGQISFDVFPKGWDKTYCLRHLENDF-------KEIHFFGDKTFEGGNDYEIYNDPRTIG 227 (247)
T ss_pred HHHHHhcC----CCCeEEEecCceEEEeeeCCCcHHHHHHHHHhhh-------hhEEEEcccCCCCCCcHhhhhcCCCce
Confidence 33333332 2333444 3479999999999999999999985 89999999 899999999876577
Q ss_pred EEecCChHHHHHHHHhhc
Q 014608 218 VMVSNAQEELLQWHAANA 235 (421)
Q Consensus 218 vav~NA~~elk~~a~~v~ 235 (421)
++|+||.+.+|.++.-++
T Consensus 228 ~~v~n~~~~~~~~~~~~~ 245 (247)
T PTZ00174 228 HSVKNPEDTIKILKELFL 245 (247)
T ss_pred EEeCCHHHHHHHHHHHhc
Confidence 888899999999876543
No 22
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=99.93 E-value=1.2e-24 Score=226.05 Aligned_cols=234 Identities=19% Similarity=0.229 Sum_probs=159.3
Q ss_pred ccCCCeEEEEeCCCCCCCCCCCCCccHHHHHHHHHHHHcCCcEEEEEcCCCHHHHHHHHHhCCCCCCCEEEEccCcEEEe
Q 014608 5 SAAARLMIVSDLDHTMVDHHDAENLSLLRFNALWEAHYRRDSLLVFSTGRSPTLYKQLRKEKPMLTPDITIMSVGTEITY 84 (421)
Q Consensus 5 ~~~~~klI~~DLDGTLl~~~~~~~~s~~~~~al~~~l~~~g~~vviaTGRs~~~~~~l~~~~~~~~~d~~I~~nGa~I~~ 84 (421)
.++.+|+|++||||||++++... +....++|. +++++|+.|++||||++..+..+.+.+++. +++|++||+.|+.
T Consensus 412 ~~~~~KLIfsDLDGTLLd~d~~i--~~~t~eAL~-~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~--~~~I~eNGA~I~~ 486 (694)
T PRK14502 412 SGQFKKIVYTDLDGTLLNPLTYS--YSTALDALR-LLKDKELPLVFCSAKTMGEQDLYRNELGIK--DPFITENGGAIFI 486 (694)
T ss_pred cCceeeEEEEECcCCCcCCCCcc--CHHHHHHHH-HHHHcCCeEEEEeCCCHHHHHHHHHHcCCC--CeEEEcCCCEEEE
Confidence 34568999999999999987532 224466666 688999999999999999999999998863 5699999999997
Q ss_pred CCc---------------cCCc-----ccHHHHHh---chhh-----------------hhHHHHHhhcCCCCcccC--C
Q 014608 85 GDA---------------MVPD-----NGWVEVLN---QKWD-----------------KKIVTEEASRFPELKLQS--E 122 (421)
Q Consensus 85 ~~~---------------~~~~-----~~~~~~l~---~~~~-----------------~~~~~~~~~~~~~l~~~~--~ 122 (421)
... .+.. ..+.+.++ +.+. .+........+.++.... .
T Consensus 487 ~~~~~~~~~~~~~~~~~~iI~~~~l~~e~i~~IL~~lke~l~~~i~ihv~~~~~~i~~~~d~~~~ei~~~TgL~~~~a~~ 566 (694)
T PRK14502 487 PKDYFRLPFAYDRVAGNYLVIELGMAYKDIRHILKKALAEACTEIENSEKAGNIFITSFGDMSVEDVSRLTDLNLKQAEL 566 (694)
T ss_pred CCCcccccccccccCCCeEEEEcCCCHHHHHHHHHHHHHhhcceeeeeeccCcEEEecCCcccHHHHHHhhCCCHHHHHH
Confidence 432 1111 11122221 1100 000001111112222110 0
Q ss_pred c--CCCceEEEEEEcccchHHHHHHHHHHHHhcCCcEEEEEEcCeeEEEecCCCCHHHHHHHHHHHHhhCCCCCCcEEEE
Q 014608 123 T--EQRPHKVSFYVDKDKAQTVTQKLSEIFKNRGLDVKIIYSGGMDLDILPQGAGKGQALAYLLRKFKCEGKVPTNTLVC 200 (421)
Q Consensus 123 ~--~~~~~ki~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~s~~~~ldI~p~g~sKg~al~~L~~~l~~~gi~~~~vl~~ 200 (421)
. .....|+.+..++ +..+.+.+.+.+. .+++.. ++.+++|. +++|||.||++|++.+ |++.+++++|
T Consensus 567 a~~Re~seKIl~~gd~----e~Leel~~~L~~~--~l~v~~-g~rfleI~-~gvdKG~AL~~L~e~~---gI~~~eViaf 635 (694)
T PRK14502 567 AKQREYSETVHIEGDK----RSTNIVLNHIQQS--GLEYSF-GGRFYEVT-GGNDKGKAIKILNELF---RLNFGNIHTF 635 (694)
T ss_pred HhhccCceeEEEcCCH----HHHHHHHHHHHHc--CcEEEE-CCEEEEeC-CCCCHHHHHHHHHHHh---CCCccceEEE
Confidence 1 1223455444332 3345666666654 355444 88999998 5999999999999999 9999999999
Q ss_pred --cCCcCchhhhcCCCceEEEecCChHHHHHHHHhhcCCCCceeeccCCCccHHHHHHHHhhC
Q 014608 201 --GDSGNDAELFSIPEVYGVMVSNAQEELLQWHAANAKNNPKLTHATERCAAGIIQAIGHFKL 261 (421)
Q Consensus 201 --GDs~NDi~M~~~agv~gvav~NA~~elk~~a~~v~~~~~~~~~~~~~~~~GV~~~l~~~~l 261 (421)
|||.||++||+.+| +||||++....-..+ . .++...+...+..|+.++|.+++.
T Consensus 636 alGDs~NDisMLe~Ag-~gVAM~~~~~~~~~l-----~-~~~~~~~~~~GP~GW~eai~~~L~ 691 (694)
T PRK14502 636 GLGDSENDYSMLETVD-SPILVQRPGNKWHKM-----R-LRNPSYVKGVGPEGFSRAVTDIIL 691 (694)
T ss_pred EcCCcHhhHHHHHhCC-ceEEEcCCCCCCCcc-----C-CCCceecCCCCcHHHHHHHHHHHh
Confidence 99999999999999 899999887755432 1 223457788899999999999875
No 23
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=99.93 E-value=1.1e-24 Score=200.51 Aligned_cols=197 Identities=30% Similarity=0.405 Sum_probs=132.6
Q ss_pred EEEEeCCCCCCCCCCCCCccHHHHHHHHHHHHcCCcEEEEEcCCCHHHHHHHHHhCCCCCCCEEEEccCcEEEeCCccCC
Q 014608 11 MIVSDLDHTMVDHHDAENLSLLRFNALWEAHYRRDSLLVFSTGRSPTLYKQLRKEKPMLTPDITIMSVGTEITYGDAMVP 90 (421)
Q Consensus 11 lI~~DLDGTLl~~~~~~~~s~~~~~al~~~l~~~g~~vviaTGRs~~~~~~l~~~~~~~~~d~~I~~nGa~I~~~~~~~~ 90 (421)
+|+||+||||++++.. ..+...+++|. ++.++|+.++++|||+...+..+.+.+ +.++|++||+.|+..+....
T Consensus 1 li~~D~DgTL~~~~~~-~~~~~~~~~l~-~l~~~g~~~~i~TGR~~~~~~~~~~~~----~~~~i~~nGa~i~~~~~~~~ 74 (204)
T TIGR01484 1 LLFFDLDGTLLDPNAH-ELSPETIEALE-RLREAGVKVVLVTGRSLAEIKELLKQL----PLPLIAENGALIFYPGEILY 74 (204)
T ss_pred CEEEeCcCCCcCCCCC-cCCHHHHHHHH-HHHHCCCEEEEECCCCHHHHHHHHHhC----CCCEEECCCcEEEECCEEEE
Confidence 5899999999987521 24555566666 678899999999999999999888873 35699999999998654322
Q ss_pred c---ccHHHHHhchhhhhHHHHHhhcCCCCcccCCcCCCceEEEEEEccc-chHHHHHHHHHHHHhcC---CcEEEEEEc
Q 014608 91 D---NGWVEVLNQKWDKKIVTEEASRFPELKLQSETEQRPHKVSFYVDKD-KAQTVTQKLSEIFKNRG---LDVKIIYSG 163 (421)
Q Consensus 91 ~---~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ki~~~~~~~-~~~~~~~~l~~~l~~~~---~~~~v~~s~ 163 (421)
. ..+...+... .. +......+.........+.+...+.+..... ........+...+...+ ..+.+++++
T Consensus 75 ~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 151 (204)
T TIGR01484 75 IEPSDVFEEILGIK--EE-IGAELKSLSEHYVGTFIEDKAIAVAIHYVGAELGQELDSKMRERLEKIGRNDLELEAIYVG 151 (204)
T ss_pred EcccccHHHHHHhh--hh-cCceeeeeccccccceeecccceeeEEEeccchhhHHHHHHHHHHHhhccccCcEEEEEec
Confidence 1 2233333210 00 0011111111111112233455555544321 11122233444443322 357777788
Q ss_pred CeeEEEecCCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEe
Q 014608 164 GMDLDILPQGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMV 220 (421)
Q Consensus 164 ~~~ldI~p~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav 220 (421)
..++||+|++++|+.|++++++++ +++++++++|||+.||++||+.++ ++|||
T Consensus 152 ~~~~ev~p~~~~K~~~~~~~~~~~---~~~~~~~~~~GD~~nD~~~~~~~~-~~vam 204 (204)
T TIGR01484 152 KTDLEVLPAGVDKGSALQALLKEL---NGKRDEILAFGDSGNDEEMFEVAG-LAVAV 204 (204)
T ss_pred CCEEEEecCCCChHHHHHHHHHHh---CCCHHHEEEEcCCHHHHHHHHHcC-CceEC
Confidence 999999999999999999999999 999999999999999999999999 89997
No 24
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=99.92 E-value=9.4e-25 Score=203.59 Aligned_cols=197 Identities=20% Similarity=0.284 Sum_probs=126.1
Q ss_pred EEEEeCCCCCCCCCCCCCccHHHHHHHHHHHHcCCcEEEEEcCCCHHHHHHHHHhCCCCCCCEEEEccCcEEEeCC--cc
Q 014608 11 MIVSDLDHTMVDHHDAENLSLLRFNALWEAHYRRDSLLVFSTGRSPTLYKQLRKEKPMLTPDITIMSVGTEITYGD--AM 88 (421)
Q Consensus 11 lI~~DLDGTLl~~~~~~~~s~~~~~al~~~l~~~g~~vviaTGRs~~~~~~l~~~~~~~~~d~~I~~nGa~I~~~~--~~ 88 (421)
+|++||||||++++... .+ .+.++|. +++++|++++++|||++..+..+.+.+++. ..++||+||+.|+... ..
T Consensus 1 ~i~~DlDGTLL~~~~~~-~~-~~~~~l~-~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~-~~~~I~~NGa~i~~~~~~~~ 76 (221)
T TIGR02463 1 WVFSDLDGTLLDSHSYD-WQ-PAAPWLT-RLQEAGIPVILCTSKTAAEVEYLQKALGLT-GDPYIAENGAAIHLEELWRE 76 (221)
T ss_pred CEEEeCCCCCcCCCCCC-cH-HHHHHHH-HHHHCCCeEEEEcCCCHHHHHHHHHHcCCC-CCcEEEeCCcEEEcCccccc
Confidence 58999999999876422 22 2455665 678999999999999999999999998863 2469999999998732 21
Q ss_pred CC----------cccHHHHHh---ch--hh----hhHHHHHhhcCCCCccc--CCcCCCceEEEEEE-cccchHHHHHHH
Q 014608 89 VP----------DNGWVEVLN---QK--WD----KKIVTEEASRFPELKLQ--SETEQRPHKVSFYV-DKDKAQTVTQKL 146 (421)
Q Consensus 89 ~~----------~~~~~~~l~---~~--~~----~~~~~~~~~~~~~l~~~--~~~~~~~~ki~~~~-~~~~~~~~~~~l 146 (421)
.+ .....+.++ +. +. .+........+.++... ...+....++.+.. .. .+..+.+
T Consensus 77 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 153 (221)
T TIGR02463 77 EPGYPRIILGISYGIIRLVLETLSEELHFKFTPFDDLSDAEIAELTGLSGSQAALAQDREASVPLLWRDS---DSRMPRF 153 (221)
T ss_pred CCCceEEecCCCHHHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCccEEecCc---hhHHHHH
Confidence 10 011111121 10 00 00000000011111110 00111112333333 21 1223444
Q ss_pred HHHHHhcCCcEEEEEEcCeeEEEecCCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEec
Q 014608 147 SEIFKNRGLDVKIIYSGGMDLDILPQGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMVS 221 (421)
Q Consensus 147 ~~~l~~~~~~~~v~~s~~~~ldI~p~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav~ 221 (421)
.+.+.+.+ +.+..+ ..++||+|++++||.|++++++++ |++++++++||||.||++||+.+| +|||+.
T Consensus 154 ~~~l~~~~--~~~~~~-~~~~ei~~~~~~Kg~al~~l~~~l---gi~~~~vi~~GD~~NDi~ml~~ag-~~va~~ 221 (221)
T TIGR02463 154 TALLADLG--LAIVQG-NRFSHVLGASSSKGKAANWLKATY---NQPDVKTLGLGDGPNDLPLLEVAD-YAVVIK 221 (221)
T ss_pred HHHHHHcC--CeEEec-CCeeEEecCCCCHHHHHHHHHHHh---CCCCCcEEEECCCHHHHHHHHhCC-ceEEeC
Confidence 45554433 455544 678999999999999999999999 999999999999999999999999 899973
No 25
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=99.92 E-value=1.2e-23 Score=201.53 Aligned_cols=219 Identities=16% Similarity=0.146 Sum_probs=141.8
Q ss_pred CeEEEEeCCCCCCCCCC---CCCccHHHHHHHHHHHHc-CCcEEEEEcCCCHHHHHHHHHhCCCCCCCEEEEccCcEEEe
Q 014608 9 RLMIVSDLDHTMVDHHD---AENLSLLRFNALWEAHYR-RDSLLVFSTGRSPTLYKQLRKEKPMLTPDITIMSVGTEITY 84 (421)
Q Consensus 9 ~klI~~DLDGTLl~~~~---~~~~s~~~~~al~~~l~~-~g~~vviaTGRs~~~~~~l~~~~~~~~~d~~I~~nGa~I~~ 84 (421)
..+|+||+||||++... ...++....++|. +|.+ +|+.|+|+|||++..+..+.+.+++ .++++||+.++.
T Consensus 14 ~~li~~D~DGTLl~~~~~p~~~~i~~~~~~~L~-~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~----~~i~~nGa~i~~ 88 (266)
T PRK10187 14 NYAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQ-LLATANDGALALISGRSMVELDALAKPYRF----PLAGVHGAERRD 88 (266)
T ss_pred CEEEEEecCCCCCCCCCCcccccCCHHHHHHHH-HHHhCCCCcEEEEeCCCHHHHHHhcCcccc----eEEEeCCCeeec
Confidence 58999999999998521 1234445566665 5655 8999999999999888777765442 378999999976
Q ss_pred CCccCCcccHHHHHhchhhhhH---HHHHhhcCCCCcccCCcCCCceEEEEEEcc-cchHHHHHHHHHHHHhcCCcEEEE
Q 014608 85 GDAMVPDNGWVEVLNQKWDKKI---VTEEASRFPELKLQSETEQRPHKVSFYVDK-DKAQTVTQKLSEIFKNRGLDVKII 160 (421)
Q Consensus 85 ~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~~l~~~~~~~~~~~ki~~~~~~-~~~~~~~~~l~~~l~~~~~~~~v~ 160 (421)
.+....... +...+...+ +.+.....++... +.+...+.++... ...++....+.+.+.+....+ .+
T Consensus 89 ~~~~~~~~~----l~~~~~~~i~~~l~~~~~~~pg~~v----e~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~-~~ 159 (266)
T PRK10187 89 INGKTHIVH----LPDAIARDISVQLHTALAQLPGAEL----EAKGMAFALHYRQAPQHEDALLALAQRITQIWPQL-AL 159 (266)
T ss_pred CCCCeeecc----CChhHHHHHHHHHHHHhccCCCcEE----EeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCce-EE
Confidence 322110011 111111111 1111222233222 1222223333311 112333445544444322223 34
Q ss_pred EEcCeeEEEecCCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCC----CceEEEecCChHHHHHHHHhhcC
Q 014608 161 YSGGMDLDILPQGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIP----EVYGVMVSNAQEELLQWHAANAK 236 (421)
Q Consensus 161 ~s~~~~ldI~p~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~a----gv~gvav~NA~~elk~~a~~v~~ 236 (421)
.++..++||.|+++|||.||+++++++ |++.+++++|||+.||++||+.+ | ++|+|+|+.+. |++...
T Consensus 160 ~~g~~~lEi~p~g~~Kg~al~~ll~~~---~~~~~~v~~~GD~~nD~~mf~~~~~~~g-~~vavg~a~~~----A~~~l~ 231 (266)
T PRK10187 160 QPGKCVVEIKPRGTNKGEAIAAFMQEA---PFAGRTPVFVGDDLTDEAGFAVVNRLGG-ISVKVGTGATQ----ASWRLA 231 (266)
T ss_pred eCCCEEEEeeCCCCCHHHHHHHHHHhc---CCCCCeEEEEcCCccHHHHHHHHHhcCC-eEEEECCCCCc----CeEeCC
Confidence 578899999999999999999999999 99999999999999999999998 8 89999999754 333333
Q ss_pred CCCceeeccCCCccHHHHHHHHhh
Q 014608 237 NNPKLTHATERCAAGIIQAIGHFK 260 (421)
Q Consensus 237 ~~~~~~~~~~~~~~GV~~~l~~~~ 260 (421)
+.++|..+|+.+.
T Consensus 232 -----------~~~~v~~~L~~l~ 244 (266)
T PRK10187 232 -----------GVPDVWSWLEMIT 244 (266)
T ss_pred -----------CHHHHHHHHHHHH
Confidence 3678999998875
No 26
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.91 E-value=2.3e-23 Score=197.02 Aligned_cols=238 Identities=19% Similarity=0.157 Sum_probs=153.9
Q ss_pred CeEEEEeCCCCCCCCCCCCCccHHHHHHHHHHHHcCCcEEEEEcCCCHHHHHHHHHhCCCCCCCEEEEccCcEEEeCCcc
Q 014608 9 RLMIVSDLDHTMVDHHDAENLSLLRFNALWEAHYRRDSLLVFSTGRSPTLYKQLRKEKPMLTPDITIMSVGTEITYGDAM 88 (421)
Q Consensus 9 ~klI~~DLDGTLl~~~~~~~~s~~~~~al~~~l~~~g~~vviaTGRs~~~~~~l~~~~~~~~~d~~I~~nGa~I~~~~~~ 88 (421)
+|+||+||||||++++... ...+..+|. +++++|+.|++||||++..+..+++.+++. +.+|++||+.|+.....
T Consensus 1 ~KLIftDLDGTLLd~~~~~--~~~a~~aL~-~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~--~p~I~eNGA~I~~p~~~ 75 (302)
T PRK12702 1 MRLVLSSLDGSLLDLEFNS--YGAARQALA-ALERRSIPLVLYSLRTRAQLEHLCRQLRLE--HPFICEDGSAIYVPEHY 75 (302)
T ss_pred CcEEEEeCCCCCcCCCCcC--CHHHHHHHH-HHHHCCCEEEEEcCCCHHHHHHHHHHhCCC--CeEEEeCCcEEEEcccc
Confidence 4799999999999987532 333556665 688999999999999999999999999874 35999999999975322
Q ss_pred CC-----------ccc-----------HHHHHhc---hhh------hhHHHHHhhcCCCCcccC--CcCCCceEEEEEEc
Q 014608 89 VP-----------DNG-----------WVEVLNQ---KWD------KKIVTEEASRFPELKLQS--ETEQRPHKVSFYVD 135 (421)
Q Consensus 89 ~~-----------~~~-----------~~~~l~~---~~~------~~~~~~~~~~~~~l~~~~--~~~~~~~ki~~~~~ 135 (421)
.+ +.. +...+.+ .+. .+.-.+....+.+|.... .-.++.+.-.+...
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~lg~~y~~ir~~L~~l~~~~~~~f~gF~d~t~~ei~~~TGL~~~~A~~A~~Re~SEp~~w~ 155 (302)
T PRK12702 76 FPAGILDEQWQHRPPYYVCALGLPYPCLRHILQQVRQDSHLDLIGFGDWTASELAAATGIPLEEAERAQKREYSEIFSYS 155 (302)
T ss_pred ccccccccccccCCCceEEecCCCHHHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCcceEec
Confidence 20 000 1111111 000 011111222233333211 12344444455554
Q ss_pred ccchHHHHHHHHHHHHhcCCcEEEEEEcCeeEEEec------------------C---CCCHHHHHHHHHHHHhhCCCCC
Q 014608 136 KDKAQTVTQKLSEIFKNRGLDVKIIYSGGMDLDILP------------------Q---GAGKGQALAYLLRKFKCEGKVP 194 (421)
Q Consensus 136 ~~~~~~~~~~l~~~l~~~~~~~~v~~s~~~~ldI~p------------------~---g~sKg~al~~L~~~l~~~gi~~ 194 (421)
.+... +.+.+.+.| ++++ .|+.++.++. . +++||.|++.|.+.+.... ..
T Consensus 156 ~~~~~-----~~~~~~~~g--~~~~-~GgRf~H~l~~~~~~~~~~~~~~~~~~~~~~~~~dKg~A~~~L~~~y~~~~-~~ 226 (302)
T PRK12702 156 GDPAR-----LREAFAQQE--ANLT-QHLLRLHQLHFSDLPQWYLTGWMQPTLAAEPNSLPGEQAVQLLLDCYQRHL-GP 226 (302)
T ss_pred CCHHH-----HHHHHHHcC--CeEE-ecCceEEecccccccccccccccccccccccCCCCHHHHHHHHHHHHHhcc-CC
Confidence 33221 155566554 4444 6678888887 6 9999999999999993222 34
Q ss_pred CcEEEEcCCcCchhhhcCCCceEEEecCChHHHH-HHHHhh--cCCCCceeeccCCCccHHHHHHHHhhC
Q 014608 195 TNTLVCGDSGNDAELFSIPEVYGVMVSNAQEELL-QWHAAN--AKNNPKLTHATERCAAGIIQAIGHFKL 261 (421)
Q Consensus 195 ~~vl~~GDs~NDi~M~~~agv~gvav~NA~~elk-~~a~~v--~~~~~~~~~~~~~~~~GV~~~l~~~~l 261 (421)
-.++++|||.||++||+.++ ++|.|.+....-. +.|-.. ....+..++++.++..|..+++.+++.
T Consensus 227 ~~tiaLGDspND~~mLe~~D-~~vvi~~~~~~~~~~~~~~l~~~~~~~~~~~a~~~GP~GW~e~v~~~l~ 295 (302)
T PRK12702 227 IKALGIGCSPPDLAFLRWSE-QKVVLPSPIADSLWKEALRLGGPEVQPQWQLAQLPGPEGWNEVVLMWLE 295 (302)
T ss_pred ceEEEecCChhhHHHHHhCC-eeEEecCCCCCCcccccccccCcccCccceecCCCCcHHHHHHHHHHHH
Confidence 48999999999999999999 8999876654322 001111 112233458888999999999999874
No 27
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=99.89 E-value=1.4e-21 Score=212.32 Aligned_cols=239 Identities=21% Similarity=0.335 Sum_probs=181.3
Q ss_pred CeEEE--EeCCCCCCCCCCCCCccHHHHHHHHHHHH----cCCcEEEEEcCCCHHHHHHHHHhCCCC--CCCEEEEccCc
Q 014608 9 RLMIV--SDLDHTMVDHHDAENLSLLRFNALWEAHY----RRDSLLVFSTGRSPTLYKQLRKEKPML--TPDITIMSVGT 80 (421)
Q Consensus 9 ~klI~--~DLDGTLl~~~~~~~~s~~~~~al~~~l~----~~g~~vviaTGRs~~~~~~l~~~~~~~--~~d~~I~~nGa 80 (421)
.++++ +|+|+| .. . ...++.+.+.+. ...+.|+++|||++.++..+++..+++ .||++||+.|+
T Consensus 770 ~~~~via~D~d~~-~~--~-----~~~l~~~~~~~~~~~~~~~igfv~aTGR~l~~~~~~l~~~~lp~~~PD~lI~~vGT 841 (1050)
T TIGR02468 770 KRLFVIAVDCYDD-KD--L-----LQIIKNIFEAVRKERMEGSSGFILSTSMTISEIQSFLKSGGLNPTDFDALICNSGS 841 (1050)
T ss_pred ceEEEEEeccCCC-CC--h-----HHHHHHHHHHHhccccCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeCCCc
Confidence 45555 999999 22 1 122445554553 344899999999999999999998887 89999999999
Q ss_pred EEEeC-------CccCCcccHHHHHhchhhhhHHHHHhhcC------------CCCcccCCcCCCceEEEEEEcccchHH
Q 014608 81 EITYG-------DAMVPDNGWVEVLNQKWDKKIVTEEASRF------------PELKLQSETEQRPHKVSFYVDKDKAQT 141 (421)
Q Consensus 81 ~I~~~-------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~------------~~l~~~~~~~~~~~ki~~~~~~~~~~~ 141 (421)
+||+. ..+.++..|...++..|..+.+.+....+ +++..|+...+..+|++|++.......
T Consensus 842 eIyy~~~~~~~~~~~~~D~~w~~hI~~rW~ge~~r~~L~~l~~~~~~~~~~~~~~l~~Q~~~~q~~~k~SY~v~d~~~~~ 921 (1050)
T TIGR02468 842 ELYYPSLNGSEEGKLVADQDYHSHIEYRWGGEGLRKTLVKWAASINEKKGENEEQIVEEDEESSTDHCYAFKVKDPSKVP 921 (1050)
T ss_pred ceeccCcCCCCCCCceECHHHHHHHHccCCcHHHHHHHHHHhhhcccccccccccceecChhhCCCceEEEEecCcccCc
Confidence 99996 45677888999999999876554433222 346777788899999999865434445
Q ss_pred HHHHHHHHHHhcCCcEEEEEEcC-eeEEEecCCCCHHHHHHHHHHHHhhCCCCCCcEEE-EcCCcC-chh-hhcCCCceE
Q 014608 142 VTQKLSEIFKNRGLDVKIIYSGG-MDLDILPQGAGKGQALAYLLRKFKCEGKVPTNTLV-CGDSGN-DAE-LFSIPEVYG 217 (421)
Q Consensus 142 ~~~~l~~~l~~~~~~~~v~~s~~-~~ldI~p~g~sKg~al~~L~~~l~~~gi~~~~vl~-~GDs~N-Di~-M~~~agv~g 217 (421)
.++.|++.+..+++.++++++.+ .++||+|..+||++||+||+.++ |++++++++ +|||+| |++ |+.-.. .+
T Consensus 922 ~v~elr~~Lr~~gLr~~~iys~~~~~LDVlP~~ASKgqAlRyL~~rw---gi~l~~v~VfaGdSGntD~e~Ll~G~~-~t 997 (1050)
T TIGR02468 922 PVKELRKLLRIQGLRCHAVYCRNGTRLNVIPLLASRSQALRYLFVRW---GIELANMAVFVGESGDTDYEGLLGGLH-KT 997 (1050)
T ss_pred cHHHHHHHHHhCCCceEEEeecCCcEeeeeeCCCCHHHHHHHHHHHc---CCChHHeEEEeccCCCCCHHHHhCCce-eE
Confidence 56889999999899999998875 99999999999999999999999 999999966 999999 966 665554 56
Q ss_pred EEecC----ChHHHHHHH-----HhhcCCCCceeecc-CCCccHHHHHHHHh
Q 014608 218 VMVSN----AQEELLQWH-----AANAKNNPKLTHAT-ERCAAGIIQAIGHF 259 (421)
Q Consensus 218 vav~N----A~~elk~~a-----~~v~~~~~~~~~~~-~~~~~GV~~~l~~~ 259 (421)
|.+.. +.+++..-= +.|..+.++|..+. ....+-|..+|+++
T Consensus 998 vi~~g~~~~~s~~l~~~~sY~~eDVvp~dspni~~~~~~~~~~di~~aL~~l 1049 (1050)
T TIGR02468 998 VILKGVVSRGSEQLHANRSYPLDDVVPLDSPNIVQATGGSSSDDISDALKKL 1049 (1050)
T ss_pred EEEecccccchhhhcccCCCcccccccCCCCCeEeecCCCCHHHHHHHHHhc
Confidence 66554 556665211 11333556777665 44567888888875
No 28
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=99.88 E-value=1.7e-22 Score=188.84 Aligned_cols=193 Identities=18% Similarity=0.196 Sum_probs=122.5
Q ss_pred EEEEeCCCCCCCCCCCCCccHHHHHHHHHHHHcCCcEEEEEcCCCHHHHHHHHHhCCCCCCCEEEEccCcEEEeCCc---
Q 014608 11 MIVSDLDHTMVDHHDAENLSLLRFNALWEAHYRRDSLLVFSTGRSPTLYKQLRKEKPMLTPDITIMSVGTEITYGDA--- 87 (421)
Q Consensus 11 lI~~DLDGTLl~~~~~~~~s~~~~~al~~~l~~~g~~vviaTGRs~~~~~~l~~~~~~~~~d~~I~~nGa~I~~~~~--- 87 (421)
+|+|||||||++++.. ...+.++|. +++++|+.++++|||++..+..+.+++++. +++|++||+.|++...
T Consensus 1 li~~DlDGTLl~~~~~---~~~~~~ai~-~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~--~~~I~~NGa~I~~~~~~~~ 74 (225)
T TIGR02461 1 VIFTDLDGTLLPPGYE---PGPAREALE-ELKDLGFPIVFVSSKTRAEQEYYREELGVE--PPFIVENGGAIFIPRGYFP 74 (225)
T ss_pred CEEEeCCCCCcCCCCC---chHHHHHHH-HHHHCCCEEEEEeCCCHHHHHHHHHHcCCC--CcEEEcCCcEEEecCcccc
Confidence 5899999999995432 223456666 678899999999999999999999998863 3589999999987321
Q ss_pred ------------cCCc-----ccHHHHHh---chhhh----hHHHHHhhcCCCCccc--C-CcCCCceEEEEEEcccchH
Q 014608 88 ------------MVPD-----NGWVEVLN---QKWDK----KIVTEEASRFPELKLQ--S-ETEQRPHKVSFYVDKDKAQ 140 (421)
Q Consensus 88 ------------~~~~-----~~~~~~l~---~~~~~----~~~~~~~~~~~~l~~~--~-~~~~~~~ki~~~~~~~~~~ 140 (421)
.+.. ..+.+.++ +.+.. +........+.+++.. . .......|+.++.+++.
T Consensus 75 ~~~~~~~~~~~~~i~~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~e~-- 152 (225)
T TIGR02461 75 FPVGAGREVGNYEVIELGKPVAKIRAALKEAENEYGLKYYGNSTAEEVEKLTGLPRELAPLAKRREYSETIFLWSREG-- 152 (225)
T ss_pred ccccccccCCCeEEEEcCCCHHHHHHHHHHHHHhcCccchhcCCHHHHHHHHCcCHHHHHHHHhhhcCCcccCCCHHH--
Confidence 1111 11222221 10100 0000000111122110 0 01123345544443322
Q ss_pred HHHHHHHHHHHhcCCcEEEEEEcCeeEEEecCCCCHHHHHHHHHHHHhhCCC--CCCcEEEEcCCcCchhhhcCCCceEE
Q 014608 141 TVTQKLSEIFKNRGLDVKIIYSGGMDLDILPQGAGKGQALAYLLRKFKCEGK--VPTNTLVCGDSGNDAELFSIPEVYGV 218 (421)
Q Consensus 141 ~~~~~l~~~l~~~~~~~~v~~s~~~~ldI~p~g~sKg~al~~L~~~l~~~gi--~~~~vl~~GDs~NDi~M~~~agv~gv 218 (421)
...+.+.+++ ..++++.++ .++++ ++++||+.|++.+++.+ ++ +++++++|||+.||++||+.+| ++|
T Consensus 153 --~~~~~~~~~~--~~~~~~~s~-~~~~i-~~~~sK~~al~~l~~~~---~~~~~~~~~i~~GD~~nD~~ml~~ag-~~v 222 (225)
T TIGR02461 153 --WEAILVTARA--RGLKYTHGG-RFYTV-HGGSDKGKAIKRLLDLY---KLRPGAIESVGLGDSENDFPMFEVVD-LAF 222 (225)
T ss_pred --HHHHHHHHHH--cCCcEEECC-EEEEE-CCCCCHHHHHHHHHHHh---ccccCcccEEEEcCCHHHHHHHHhCC-CcE
Confidence 3444444433 346666664 44555 56999999999999999 76 6679999999999999999999 899
Q ss_pred Eec
Q 014608 219 MVS 221 (421)
Q Consensus 219 av~ 221 (421)
+|+
T Consensus 223 ~v~ 225 (225)
T TIGR02461 223 LVG 225 (225)
T ss_pred ecC
Confidence 985
No 29
>PLN02423 phosphomannomutase
Probab=99.88 E-value=6.2e-22 Score=187.44 Aligned_cols=206 Identities=16% Similarity=0.188 Sum_probs=123.0
Q ss_pred CeEEEEeCCCCCCCCCCCCCccHHHHHHHHHHHHcCCcEEEEEcCCCHHHHHHHHHhCCCCCCCEEEEccCcEEEeCCcc
Q 014608 9 RLMIVSDLDHTMVDHHDAENLSLLRFNALWEAHYRRDSLLVFSTGRSPTLYKQLRKEKPMLTPDITIMSVGTEITYGDAM 88 (421)
Q Consensus 9 ~klI~~DLDGTLl~~~~~~~~s~~~~~al~~~l~~~g~~vviaTGRs~~~~~~l~~~~~~~~~d~~I~~nGa~I~~~~~~ 88 (421)
..+++|||||||++++... +....+++. +++++ +.|++||||+...+...........+.++|++||+.++.+++.
T Consensus 7 ~~i~~~D~DGTLl~~~~~i--~~~~~~ai~-~l~~~-i~fviaTGR~~~~~~~~~~~~~~~~~~~~I~~NGa~i~~~g~~ 82 (245)
T PLN02423 7 GVIALFDVDGTLTAPRKEA--TPEMLEFMK-ELRKV-VTVGVVGGSDLSKISEQLGKTVINDYDYVFSENGLVAHKDGKL 82 (245)
T ss_pred ceEEEEeccCCCcCCCCcC--CHHHHHHHH-HHHhC-CEEEEECCcCHHHHHHHhcccccccCCEEEECCceEEEeCCEE
Confidence 4566799999999887653 444556665 57766 9999999998665543333211111246899999999976654
Q ss_pred CCc---------ccHHHHHhc--hhhhhH--HHHHhhc--CC-CC---ccc-CC----cCCCceEEEEEEcccchHHHHH
Q 014608 89 VPD---------NGWVEVLNQ--KWDKKI--VTEEASR--FP-EL---KLQ-SE----TEQRPHKVSFYVDKDKAQTVTQ 144 (421)
Q Consensus 89 ~~~---------~~~~~~l~~--~~~~~~--~~~~~~~--~~-~l---~~~-~~----~~~~~~ki~~~~~~~~~~~~~~ 144 (421)
+.. ....++++. .|.... ......+ +. .+ ... .. ......++... .+...+...
T Consensus 83 i~~~~l~~~l~~~~~~~ii~~~~~~~~~~~i~~~~~~~ie~~~~i~~~~~~~~~~~~~~~~~~~~i~~i--~~~~~~~~~ 160 (245)
T PLN02423 83 IGTQSLKSFLGEDKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNVSPIGRNCSQEERDEFEKYDKV--HNIRPKMVS 160 (245)
T ss_pred EEEecccccCCHHHHHHHHHHHHHHHHHcCCccccCCeEEccCCccccCcccccCCHhHHhhHHhhCcc--chHHHHHHH
Confidence 432 112222221 111110 0000000 00 00 100 00 00111233222 122334444
Q ss_pred HHHHHHHhcCCcEEEEEEcCeeEEEecCCCCHHHHHHHHHHHHhhCCCCCCcEEEEcC----CcCchhhhcCCCceEEEe
Q 014608 145 KLSEIFKNRGLDVKIIYSGGMDLDILPQGAGKGQALAYLLRKFKCEGKVPTNTLVCGD----SGNDAELFSIPEVYGVMV 220 (421)
Q Consensus 145 ~l~~~l~~~~~~~~v~~s~~~~ldI~p~g~sKg~al~~L~~~l~~~gi~~~~vl~~GD----s~NDi~M~~~agv~gvav 220 (421)
.+.+.+.+ ..+....+|..++||+|+|+|||.||+.|+ +++++++||| ++||++|++..|+.++.|
T Consensus 161 ~l~~~~~~--~~~~~s~~g~~~iDi~~~gvnKg~al~~L~--------~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~ 230 (245)
T PLN02423 161 VLREKFAH--LNLTYSIGGQISFDVFPQGWDKTYCLQFLE--------DFDEIHFFGDKTYEGGNDHEIFESERTIGHTV 230 (245)
T ss_pred HHHHhCCC--CcEEEecCCcEEEEEeeCCCCHHHHHHHhc--------CcCeEEEEeccCCCCCCcHHHHhCCCcceEEe
Confidence 55554421 234444455589999999999999999997 5799999999 799999999888899999
Q ss_pred cCChHHHHHH
Q 014608 221 SNAQEELLQW 230 (421)
Q Consensus 221 ~NA~~elk~~ 230 (421)
.+-.+.+...
T Consensus 231 ~~~~~~~~~~ 240 (245)
T PLN02423 231 TSPDDTREQC 240 (245)
T ss_pred CCHHHHHHHH
Confidence 8877766543
No 30
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=99.86 E-value=1e-20 Score=205.03 Aligned_cols=221 Identities=15% Similarity=0.179 Sum_probs=140.1
Q ss_pred cccCCCeEEEEeCCCCCCCCCC---CCCccHHHHHHHHHHHHc-CCcEEEEEcCCCHHHHHHHHHhCCCCCCCEEEEccC
Q 014608 4 LSAAARLMIVSDLDHTMVDHHD---AENLSLLRFNALWEAHYR-RDSLLVFSTGRSPTLYKQLRKEKPMLTPDITIMSVG 79 (421)
Q Consensus 4 l~~~~~klI~~DLDGTLl~~~~---~~~~s~~~~~al~~~l~~-~g~~vviaTGRs~~~~~~l~~~~~~~~~d~~I~~nG 79 (421)
+..+++++|+||+||||++... ...++....++|. +|.+ +|+.|+++|||++..+..+...++ .++|++||
T Consensus 487 y~~~~~rLi~~D~DGTL~~~~~~~~~~~~~~~~~~~L~-~L~~d~g~~V~ivSGR~~~~l~~~~~~~~----l~liaenG 561 (726)
T PRK14501 487 YRAASRRLLLLDYDGTLVPFAPDPELAVPDKELRDLLR-RLAADPNTDVAIISGRDRDTLERWFGDLP----IHLVAEHG 561 (726)
T ss_pred HHhccceEEEEecCccccCCCCCcccCCCCHHHHHHHH-HHHcCCCCeEEEEeCCCHHHHHHHhCCCC----eEEEEeCC
Confidence 4456789999999999998542 1234445555665 5555 699999999999887777665443 36899999
Q ss_pred cEEEeCCcc----CC-cccHHHHHhchhhhhHHHHHhhcCCCCcccCCcCCCceEEEEEEcccch---HHHHHHHHHHHH
Q 014608 80 TEITYGDAM----VP-DNGWVEVLNQKWDKKIVTEEASRFPELKLQSETEQRPHKVSFYVDKDKA---QTVTQKLSEIFK 151 (421)
Q Consensus 80 a~I~~~~~~----~~-~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ki~~~~~~~~~---~~~~~~l~~~l~ 151 (421)
+.+...+.. .. +..|.+.+ ......+....+....+.+...+++.....+. ....+.+.+.+.
T Consensus 562 ~~i~~~~~~w~~~~~~~~~w~~~v---------~~il~~~~~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~ 632 (726)
T PRK14501 562 AWSRAPGGEWQLLEPVATEWKDAV---------RPILEEFVDRTPGSFIEEKEASLAWHYRNADPELGEARANELILALS 632 (726)
T ss_pred EEEeCCCCceEECCCcchhHHHHH---------HHHHHHHHhcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHHHHHHH
Confidence 999754321 01 11222221 11122221211112223334556665432211 111223333332
Q ss_pred hc--CCcEEEEEEcCeeEEEecCCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCC---CceEEEecCChHH
Q 014608 152 NR--GLDVKIIYSGGMDLDILPQGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIP---EVYGVMVSNAQEE 226 (421)
Q Consensus 152 ~~--~~~~~v~~s~~~~ldI~p~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~a---gv~gvav~NA~~e 226 (421)
.. +..+.+ .+|+.++||.|+++|||.|++.+++ +++++.+++|||+.||++||+.+ + ++|+|+|+.
T Consensus 633 ~~~~~~~~~v-~~g~~~veV~p~~vnKG~al~~ll~-----~~~~d~vl~~GD~~nDe~Mf~~~~~~~-~~v~vG~~~-- 703 (726)
T PRK14501 633 SLLSNAPLEV-LRGNKVVEVRPAGVNKGRAVRRLLE-----AGPYDFVLAIGDDTTDEDMFRALPETA-ITVKVGPGE-- 703 (726)
T ss_pred HHhcCCCeEE-EECCeEEEEEECCCCHHHHHHHHHh-----cCCCCEEEEECCCCChHHHHHhcccCc-eEEEECCCC--
Confidence 21 234554 4688999999999999999999998 35788999999999999999986 6 899999964
Q ss_pred HHHHHHhhcCCCCceeeccCCCccHHHHHHHHhh
Q 014608 227 LLQWHAANAKNNPKLTHATERCAAGIIQAIGHFK 260 (421)
Q Consensus 227 lk~~a~~v~~~~~~~~~~~~~~~~GV~~~l~~~~ 260 (421)
..|++.+.+ .++|++.|+.+.
T Consensus 704 --s~A~~~l~~-----------~~eV~~~L~~l~ 724 (726)
T PRK14501 704 --SRARYRLPS-----------QREVRELLRRLL 724 (726)
T ss_pred --CcceEeCCC-----------HHHHHHHHHHHh
Confidence 334444443 356999888753
No 31
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=99.85 E-value=1.9e-20 Score=177.33 Aligned_cols=224 Identities=15% Similarity=0.157 Sum_probs=137.0
Q ss_pred CCeEEEEeCCCCCCCCCC-C--CCccHHHHHHHHHHHHcCCcEEEEEcCCCHHHHHHHHHhCCCCCCC-EEEEccCcEEE
Q 014608 8 ARLMIVSDLDHTMVDHHD-A--ENLSLLRFNALWEAHYRRDSLLVFSTGRSPTLYKQLRKEKPMLTPD-ITIMSVGTEIT 83 (421)
Q Consensus 8 ~~klI~~DLDGTLl~~~~-~--~~~s~~~~~al~~~l~~~g~~vviaTGRs~~~~~~l~~~~~~~~~d-~~I~~nGa~I~ 83 (421)
++++|+||+||||++... + ..++....+.|.+...+.+..++|+|||++..+ ...+.+ +. +++++||+++.
T Consensus 2 ~~~~l~lD~DGTL~~~~~~p~~~~~~~~~~~~L~~L~~~~~~~v~ivSGR~~~~~---~~~~~~--~~~~l~g~hG~~~~ 76 (244)
T TIGR00685 2 RKRAFFFDYDGTLSEIVPDPDAAVVSDRLLTILQKLAARPHNAIWIISGRKFLEK---WLGVKL--PGLGLAGEHGCEMK 76 (244)
T ss_pred CcEEEEEecCccccCCcCCCcccCCCHHHHHHHHHHHhCCCCeEEEEECCChhhc---cccCCC--CceeEEeecCEEEe
Confidence 468999999999997542 1 223444455666544566788999999985443 333322 22 48899999987
Q ss_pred eCCccCCcccHHHHHhchhhh--hHHHHHhhcCCCCcccCCcCCCceEEEEEEccc-chHHH---HHHHHHHHHhcCCcE
Q 014608 84 YGDAMVPDNGWVEVLNQKWDK--KIVTEEASRFPELKLQSETEQRPHKVSFYVDKD-KAQTV---TQKLSEIFKNRGLDV 157 (421)
Q Consensus 84 ~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~ki~~~~~~~-~~~~~---~~~l~~~l~~~~~~~ 157 (421)
.++............ ..|.. ..+.+.....|+. ..+.+...++++.... ..+.. ...+...+.. ...+
T Consensus 77 ~~g~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~pG~----~iE~K~~s~~~hyr~a~d~~~~~~~~~~~~~~~~~-~~~~ 150 (244)
T TIGR00685 77 DNGSCQDWVNLTEKI-PSWKVRANELREEITTRPGV----FIERKGVALAWHYRQAPVPELARFRAKELKEKILS-FTDL 150 (244)
T ss_pred cCCCcceeeechhhh-hhHHHHHHHHHHHHhcCCCc----EEEecceEEEEEeccCCCcHHHHHHHHHHHHHHhc-CCCE
Confidence 643321111111111 12211 0111111222332 3345666777776432 11211 1222222221 1235
Q ss_pred EEEEEcCeeEEEecCCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCC-------CceEEEecCChHHHHHH
Q 014608 158 KIIYSGGMDLDILPQGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIP-------EVYGVMVSNAQEELLQW 230 (421)
Q Consensus 158 ~v~~s~~~~ldI~p~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~a-------gv~gvav~NA~~elk~~ 230 (421)
.+ .++..++|+.|.++|||.+++.+++++ ++++.++++|||+.||++||+.+ |.++|+|+.. +.+..
T Consensus 151 ~v-~~g~~~~e~~p~~~~Kg~a~~~~~~~~---~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g--~~~~~ 224 (244)
T TIGR00685 151 EV-MDGKAVVELKPRFVNKGEIVKRLLWHQ---PGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSG--SKKTV 224 (244)
T ss_pred EE-EECCeEEEEeeCCCCHHHHHHHHHHhc---ccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecC--CcCCC
Confidence 44 477899999999999999999999999 99999999999999999999988 4478888633 33444
Q ss_pred HHhhcCCCCceeeccCCCccHHHHHHHHh
Q 014608 231 HAANAKNNPKLTHATERCAAGIIQAIGHF 259 (421)
Q Consensus 231 a~~v~~~~~~~~~~~~~~~~GV~~~l~~~ 259 (421)
|++++.+ .+.|.++|+.+
T Consensus 225 A~~~~~~-----------~~~v~~~L~~l 242 (244)
T TIGR00685 225 AKFHLTG-----------PQQVLEFLGLL 242 (244)
T ss_pred ceEeCCC-----------HHHHHHHHHHH
Confidence 5554433 45688888764
No 32
>PLN02580 trehalose-phosphatase
Probab=99.81 E-value=9.3e-19 Score=173.20 Aligned_cols=227 Identities=18% Similarity=0.192 Sum_probs=140.6
Q ss_pred cccCCCeEEEEeCCCCCCCCCC---CCCccHHHHHHHHHHHHcCCcEEEEEcCCCHHHHHHHHHhCCCCCCCEEEEccCc
Q 014608 4 LSAAARLMIVSDLDHTMVDHHD---AENLSLLRFNALWEAHYRRDSLLVFSTGRSPTLYKQLRKEKPMLTPDITIMSVGT 80 (421)
Q Consensus 4 l~~~~~klI~~DLDGTLl~~~~---~~~~s~~~~~al~~~l~~~g~~vviaTGRs~~~~~~l~~~~~~~~~d~~I~~nGa 80 (421)
+...+..++|+|+||||.+-.. ....+.....+|. .|.+. ..++|+|||+...+..+.... .-++++++|+
T Consensus 114 ~~~~k~~~LfLDyDGTLaPIv~~Pd~A~~s~~~~~aL~-~La~~-~~VAIVSGR~~~~L~~~l~~~----~l~laGsHG~ 187 (384)
T PLN02580 114 FAKGKKIALFLDYDGTLSPIVDDPDRALMSDAMRSAVK-NVAKY-FPTAIISGRSRDKVYELVGLT----ELYYAGSHGM 187 (384)
T ss_pred HhhcCCeEEEEecCCccCCCCCCcccccCCHHHHHHHH-HHhhC-CCEEEEeCCCHHHHHHHhCCC----CccEEEeCCc
Confidence 3455689999999999975432 1223333344444 55544 579999999977666555432 2357899999
Q ss_pred EEEeC-CccCC-------------cccHHHH-Hhchhhh---hH---HHHHhhcCCCCcccCCcCCCceEEEEEEccc--
Q 014608 81 EITYG-DAMVP-------------DNGWVEV-LNQKWDK---KI---VTEEASRFPELKLQSETEQRPHKVSFYVDKD-- 137 (421)
Q Consensus 81 ~I~~~-~~~~~-------------~~~~~~~-l~~~~~~---~~---~~~~~~~~~~l~~~~~~~~~~~ki~~~~~~~-- 137 (421)
++... +.... ...|... ....|.. .+ +.+.....++. ..+.+.+.+++++...
T Consensus 188 e~~~p~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~~~~i~~v~~~l~e~~~~~pGs----~VE~K~~svavHYR~a~~ 263 (384)
T PLN02580 188 DIMGPVRESVSNDHPNCIKSTDQQGKEVNLFQPASEFLPMIDEVFRSLVESTKDIKGA----KVENHKFCVSVHYRNVDE 263 (384)
T ss_pred eeecCCCCcccccccccccccccccccccccccchhhhhhHHHHHHHHHHHhccCCCC----EEEecCcEEEEEeCCCCc
Confidence 98642 11000 0001000 0011211 11 11122333443 3456677788877532
Q ss_pred c-hHHHHHHHHHHHHhcCCcEEEEEEcCeeEEEec-CCCCHHHHHHHHHHHHhhCCCCCC-c--EEEEcCCcCchhhhcC
Q 014608 138 K-AQTVTQKLSEIFKNRGLDVKIIYSGGMDLDILP-QGAGKGQALAYLLRKFKCEGKVPT-N--TLVCGDSGNDAELFSI 212 (421)
Q Consensus 138 ~-~~~~~~~l~~~l~~~~~~~~v~~s~~~~ldI~p-~g~sKg~al~~L~~~l~~~gi~~~-~--vl~~GDs~NDi~M~~~ 212 (421)
. .+...+.+.+.+.+. ..+.+ ..|..++||.| .+++||.|+++|++++ |++.. . .++|||+.||++||+.
T Consensus 264 ~~~~~~~~~l~~~l~~~-~~l~v-~~Gk~vlEVrP~~g~~KG~Av~~Ll~~~---g~~~~d~~~pi~iGDD~TDedmF~~ 338 (384)
T PLN02580 264 KNWPLVAQCVHDVLKKY-PRLRL-THGRKVLEVRPVIDWNKGKAVEFLLESL---GLSNCDDVLPIYIGDDRTDEDAFKV 338 (384)
T ss_pred hHHHHHHHHHHHHHHhC-CceEE-EeCCeEEEEecCCCCCHHHHHHHHHHhc---CCCcccceeEEEECCCchHHHHHHh
Confidence 2 234445555555443 23554 46678999999 5999999999999999 88765 3 3899999999999996
Q ss_pred -----CCceEEEecCChHHHHHHHHhhcCCCCceeeccCCCccHHHHHHHHh
Q 014608 213 -----PEVYGVMVSNAQEELLQWHAANAKNNPKLTHATERCAAGIIQAIGHF 259 (421)
Q Consensus 213 -----agv~gvav~NA~~elk~~a~~v~~~~~~~~~~~~~~~~GV~~~l~~~ 259 (421)
.| ++|+|+|+.++.. |.+... +.+.|.++|+.+
T Consensus 339 L~~~~~G-~~I~Vgn~~~~t~--A~y~L~-----------dp~eV~~~L~~L 376 (384)
T PLN02580 339 LREGNRG-YGILVSSVPKESN--AFYSLR-----------DPSEVMEFLKSL 376 (384)
T ss_pred hhccCCc-eEEEEecCCCCcc--ceEEcC-----------CHHHHHHHHHHH
Confidence 47 8999999887653 333322 256788887765
No 33
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=99.80 E-value=2.5e-18 Score=187.07 Aligned_cols=233 Identities=17% Similarity=0.228 Sum_probs=142.0
Q ss_pred ccCCCeEEEEeCCCCCCCCCC-CCCccHHHHHHHHHHHHcCCcEEEEEcCCCHHHHHHHHHhCCCCCCCEEEEccCcEEE
Q 014608 5 SAAARLMIVSDLDHTMVDHHD-AENLSLLRFNALWEAHYRRDSLLVFSTGRSPTLYKQLRKEKPMLTPDITIMSVGTEIT 83 (421)
Q Consensus 5 ~~~~~klI~~DLDGTLl~~~~-~~~~s~~~~~al~~~l~~~g~~vviaTGRs~~~~~~l~~~~~~~~~d~~I~~nGa~I~ 83 (421)
..+++++|++|+||||++... ....+...++.|.+.+.++|+.|+++|||++..+..+....+ .-+++++||+.+.
T Consensus 592 ~~~~~rlI~LDyDGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~~---~l~laaEHG~~ir 668 (854)
T PLN02205 592 KRTTTRAILLDYDGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPCE---KLGIAAEHGYFLR 668 (854)
T ss_pred HhhcCeEEEEecCCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCCC---CeEEEEeCCEEEE
Confidence 445689999999999997653 222333445555544588999999999999877666654331 2358999999987
Q ss_pred eCCccCCcccHHHHHhchhhhhHHHHHhhcCCCCcccCCcCCCceEEEEEEcccc-------hHHHHHHHHHHHHhcCCc
Q 014608 84 YGDAMVPDNGWVEVLNQKWDKKIVTEEASRFPELKLQSETEQRPHKVSFYVDKDK-------AQTVTQKLSEIFKNRGLD 156 (421)
Q Consensus 84 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ki~~~~~~~~-------~~~~~~~l~~~l~~~~~~ 156 (421)
..+.... .......+..|... +......|..-.+....+.+...+.++....+ +++....+...+.+. .
T Consensus 669 ~~~~~~w-~~~~~~~~~~w~~~-v~~i~~~y~ertpGs~IE~K~~slv~HyR~adpd~~~~qa~el~~~l~~~l~~~--~ 744 (854)
T PLN02205 669 LKRDVEW-ETCVPVADCSWKQI-AEPVMQLYTETTDGSTIEDKETALVWCYEDADPDFGSCQAKELLDHLESVLANE--P 744 (854)
T ss_pred eCCCcee-eecchhhhHHHHHH-HHHHHHHHhcCCCchhheecceEEEEehhhCChHHhhhhhHHHHHHHHHHHhcC--c
Confidence 6543110 00111111123211 11112222111111223444556665553221 123444454444432 2
Q ss_pred EEEEEEcCeeEEEecCCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCC-------------ceEEEecCC
Q 014608 157 VKIIYSGGMDLDILPQGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPE-------------VYGVMVSNA 223 (421)
Q Consensus 157 ~~v~~s~~~~ldI~p~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~ag-------------v~gvav~NA 223 (421)
+ .+.+|...+||.|+++|||.|++.|++++...|++++.+++|||+.||++||+.++ .++|.||..
T Consensus 745 ~-~v~~G~~vvEV~p~gvnKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~~~~~~g~~~~~~~~~~~v~VG~~ 823 (854)
T PLN02205 745 V-TVKSGQNIVEVKPQGVSKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVITSSMAGPSIAPRAEVFACTVGQK 823 (854)
T ss_pred e-EEEECCcEEEEEeCCCCHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHhhhhccCCcccccccceeEEECCC
Confidence 3 35688999999999999999999998654333899999999999999999999875 245667643
Q ss_pred hHHHHHHHHhhcCCCCceeeccCCCccHHHHHHHHhh
Q 014608 224 QEELLQWHAANAKNNPKLTHATERCAAGIIQAIGHFK 260 (421)
Q Consensus 224 ~~elk~~a~~v~~~~~~~~~~~~~~~~GV~~~l~~~~ 260 (421)
+ +.+++++. +.+.|.+.|+.+.
T Consensus 824 ~------------S~A~y~L~---d~~eV~~lL~~L~ 845 (854)
T PLN02205 824 P------------SKAKYYLD---DTAEIVRLMQGLA 845 (854)
T ss_pred C------------ccCeEecC---CHHHHHHHHHHHH
Confidence 2 22233322 2567888877764
No 34
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.77 E-value=1.4e-17 Score=148.74 Aligned_cols=238 Identities=20% Similarity=0.250 Sum_probs=153.5
Q ss_pred CCeEEEEeCCCCCCCCCCCCCccHHHHHHHHHHHHcCCcEEEEEcCCCHHHHHHHHHhCCCCCCCEEEEccCcEEEeCCc
Q 014608 8 ARLMIVSDLDHTMVDHHDAENLSLLRFNALWEAHYRRDSLLVFSTGRSPTLYKQLRKEKPMLTPDITIMSVGTEITYGDA 87 (421)
Q Consensus 8 ~~klI~~DLDGTLl~~~~~~~~s~~~~~al~~~l~~~g~~vviaTGRs~~~~~~l~~~~~~~~~d~~I~~nGa~I~~~~~ 87 (421)
..++||+||||||+++..+-..... -+. ++++.|+.+++||..+......+.+.++.. +-.+|++||+.|+....
T Consensus 6 ~~~lIFtDlD~TLl~~~ye~~pA~p---v~~-el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~-~~p~iaEnG~aI~~p~~ 80 (274)
T COG3769 6 MPLLIFTDLDGTLLPHSYEWQPAAP---VLL-ELKDAGVPVILCSSKTRAEMLYLQKSLGVQ-GLPLIAENGAAIYLPKG 80 (274)
T ss_pred cceEEEEcccCcccCCCCCCCccch---HHH-HHHHcCCeEEEeccchHHHHHHHHHhcCCC-CCceeecCCceEEeccc
Confidence 4789999999999996532222211 222 578899999999999999999999999875 23489999999987432
Q ss_pred cCC-cc-----------cH---HHHHhch-------h----hhhHHHHHhhcCCCCcccC--CcCCCceEEEEEEcccch
Q 014608 88 MVP-DN-----------GW---VEVLNQK-------W----DKKIVTEEASRFPELKLQS--ETEQRPHKVSFYVDKDKA 139 (421)
Q Consensus 88 ~~~-~~-----------~~---~~~l~~~-------~----~~~~~~~~~~~~~~l~~~~--~~~~~~~ki~~~~~~~~~ 139 (421)
..+ +. .+ .+-++.. + ..+.-.++...+.+++... ....+.+..+++... .
T Consensus 81 ~~~~~~~~r~~~g~~~~elg~~l~~ire~l~kLee~~g~~~~~~~d~~ei~e~TGlpre~aaLa~~rEyseti~~rs--~ 158 (274)
T COG3769 81 WFPFDGKPREISGISHIELGKVLEKIREKLDKLEEHFGFTTFDDVDDEEIAEWTGLPREQAALAMLREYSETIIWRS--S 158 (274)
T ss_pred ccccCCCCceecceEeeehhhhHHHHHHHHHHHHHHhCeeEeccCCHHHHHHHhCCChHHhHHHHHHHhhhheeecc--c
Confidence 111 10 00 0111111 0 0011112334455554311 111223344444432 2
Q ss_pred HHHHHHHHHHHHhcCCcEEEEEEcCeeEEEecCCCCHHHHHHHHHHHHhhCCCCCCc-EEEEcCCcCchhhhcCCCceEE
Q 014608 140 QTVTQKLSEIFKNRGLDVKIIYSGGMDLDILPQGAGKGQALAYLLRKFKCEGKVPTN-TLVCGDSGNDAELFSIPEVYGV 218 (421)
Q Consensus 140 ~~~~~~l~~~l~~~~~~~~v~~s~~~~ldI~p~g~sKg~al~~L~~~l~~~gi~~~~-vl~~GDs~NDi~M~~~agv~gv 218 (421)
+.....+...+.++| +.++ .|..+..++.....||+|+..+++.+. .....+ ++..|||.||++||+..+ ++|
T Consensus 159 d~~~~~~~~~L~e~g--lt~v-~garf~~v~~as~gKg~Aa~~ll~~y~--rl~~~r~t~~~GDg~nD~Pl~ev~d-~Af 232 (274)
T COG3769 159 DERMAQFTARLNERG--LTFV-HGARFWHVLDASAGKGQAANWLLETYR--RLGGARTTLGLGDGPNDAPLLEVMD-YAF 232 (274)
T ss_pred chHHHHHHHHHHhcC--ceEE-eccceEEEeccccCccHHHHHHHHHHH--hcCceeEEEecCCCCCcccHHHhhh-hhe
Confidence 333456777777765 4433 456777888888899999999999885 334444 999999999999999998 999
Q ss_pred EecCChHHHHHHHHhhcCCCCceeeccCCCccHHHHHHHHhhC
Q 014608 219 MVSNAQEELLQWHAANAKNNPKLTHATERCAAGIIQAIGHFKL 261 (421)
Q Consensus 219 av~NA~~elk~~a~~v~~~~~~~~~~~~~~~~GV~~~l~~~~l 261 (421)
.|++=.-+- +.-+......+.+......+|..+.+++|.-
T Consensus 233 iV~~lnre~---~~lv~~i~~vv~~~~~~~~~~~~e~~~~~~~ 272 (274)
T COG3769 233 IVKGLNREG---VHLVSSIPAVVERIQREGPEGWREGLDHFFS 272 (274)
T ss_pred eecccchhh---hhccccchhheeeccccCchHHHHHhhhhcc
Confidence 999665332 3333344445556666678999999999864
No 35
>PLN03017 trehalose-phosphatase
Probab=99.77 E-value=2.2e-17 Score=162.05 Aligned_cols=223 Identities=17% Similarity=0.224 Sum_probs=142.4
Q ss_pred CCCeEEEEeCCCCCC---CCCCCCCccHHHHHHHHHHHHcCCcEEEEEcCCCHHHHHHHHHhCCCCCCCEEEEccCcEEE
Q 014608 7 AARLMIVSDLDHTMV---DHHDAENLSLLRFNALWEAHYRRDSLLVFSTGRSPTLYKQLRKEKPMLTPDITIMSVGTEIT 83 (421)
Q Consensus 7 ~~~klI~~DLDGTLl---~~~~~~~~s~~~~~al~~~l~~~g~~vviaTGRs~~~~~~l~~~~~~~~~d~~I~~nGa~I~ 83 (421)
.+..+||+|+||||+ +..+...++....++|. ++. +++.++|+|||++..+..+. ++ ..-+++++||+++.
T Consensus 109 ~k~~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~-~La-~~~~vaIvSGR~~~~l~~~~---~l-~~l~l~g~hGa~i~ 182 (366)
T PLN03017 109 GKQIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVK-KLA-KCFPTAIVTGRCIDKVYNFV---KL-AELYYAGSHGMDIK 182 (366)
T ss_pred CCCeEEEEecCCcCcCCcCCcccccCCHHHHHHHH-HHh-cCCcEEEEeCCCHHHHHHhh---cc-cCceEEEcCCcEEe
Confidence 457899999999999 32222235555566666 565 78999999999988877663 32 23468999999987
Q ss_pred eCCc-cC------------CcccHHHHHhchhhhhHHHHHhhcCCCCcccCCcCCCceEEEEEEcccc---hHHHHHHHH
Q 014608 84 YGDA-MV------------PDNGWVEVLNQKWDKKIVTEEASRFPELKLQSETEQRPHKVSFYVDKDK---AQTVTQKLS 147 (421)
Q Consensus 84 ~~~~-~~------------~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ki~~~~~~~~---~~~~~~~l~ 147 (421)
..+. .. +...|...++.-+ ..+.+.....++. ..+.+.+.+++++.... ..++...+.
T Consensus 183 ~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~--~~L~~~~~~~pGa----~VE~K~~~vavHyR~ad~~~~~~l~~~~~ 256 (366)
T PLN03017 183 GPAKGFSRHKRVKQSLLYQPANDYLPMIDEVY--RQLLEKTKSTPGA----KVENHKFCASVHFRCVDEKKWSELVLQVR 256 (366)
T ss_pred cCCCcceeccccccccccccchhhHHHHHHHH--HHHHHHHhcCCCC----EEEecCcEEEEEcCcCCHHHHHHHHHHHH
Confidence 5321 10 0011212121100 0111222344443 34566777888775322 134455555
Q ss_pred HHHHhcCCcEEEEEEcCeeEEEecC-CCCHHHHHHHHHHHHhhCCCC---CCcEEEEcCCcCchhhhcCC-----CceEE
Q 014608 148 EIFKNRGLDVKIIYSGGMDLDILPQ-GAGKGQALAYLLRKFKCEGKV---PTNTLVCGDSGNDAELFSIP-----EVYGV 218 (421)
Q Consensus 148 ~~l~~~~~~~~v~~s~~~~ldI~p~-g~sKg~al~~L~~~l~~~gi~---~~~vl~~GDs~NDi~M~~~a-----gv~gv 218 (421)
..+.+. ..+.+ ..|...+|+.|. +++||.|+++|++.+ |.. ..-.+++||+.+|.+||+.. | ++|
T Consensus 257 ~vl~~~-~~l~v-~~GkkVlEvRP~~~~dKG~Av~~LL~~l---~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G-~gI 330 (366)
T PLN03017 257 SVLKNF-PTLKL-TQGRKVFEIRPMIEWDKGKALEFLLESL---GFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEG-FGI 330 (366)
T ss_pred HHHHhC-CCcEE-eCCCeEEEecCCCCCCHHHHHHHHHHhc---ccccCCCceEEEeCCCCccHHHHHHHhhcCCc-eEE
Confidence 555543 23454 478999999995 999999999999998 654 33689999999999999965 5 788
Q ss_pred EecCChHHHHHHHHhhcCCCCceeeccCCCccHHHHHHHHhh
Q 014608 219 MVSNAQEELLQWHAANAKNNPKLTHATERCAAGIIQAIGHFK 260 (421)
Q Consensus 219 av~NA~~elk~~a~~v~~~~~~~~~~~~~~~~GV~~~l~~~~ 260 (421)
.|+..+.+ ..|.+... +.+.|.++|+.+.
T Consensus 331 ~VG~~~k~--T~A~y~L~-----------dp~eV~~fL~~L~ 359 (366)
T PLN03017 331 LVSKFPKD--TDASYSLQ-----------DPSEVMDFLARLV 359 (366)
T ss_pred EECCCCCC--CcceEeCC-----------CHHHHHHHHHHHH
Confidence 89865332 22333332 3678888887763
No 36
>PLN02151 trehalose-phosphatase
Probab=99.70 E-value=1.5e-15 Score=148.75 Aligned_cols=223 Identities=18% Similarity=0.220 Sum_probs=136.0
Q ss_pred CCCeEEEEeCCCCCCCCC---CCCCccHHHHHHHHHHHHcCCcEEEEEcCCCHHHHHHHHHhCCCCCCCEEEEccCcEEE
Q 014608 7 AARLMIVSDLDHTMVDHH---DAENLSLLRFNALWEAHYRRDSLLVFSTGRSPTLYKQLRKEKPMLTPDITIMSVGTEIT 83 (421)
Q Consensus 7 ~~~klI~~DLDGTLl~~~---~~~~~s~~~~~al~~~l~~~g~~vviaTGRs~~~~~~l~~~~~~~~~d~~I~~nGa~I~ 83 (421)
.+..+|++|+||||++-. ....++....++|. .+. ++..++|+|||+...+..+. ++. .-++++++|+++.
T Consensus 96 ~~~~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~-~La-~~~~vaIvSGR~~~~l~~~~---~~~-~l~laGsHG~e~~ 169 (354)
T PLN02151 96 GKQIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVR-KLA-KCFPTAIVSGRCREKVSSFV---KLT-ELYYAGSHGMDIK 169 (354)
T ss_pred CCceEEEEecCccCCCCCCCcccccCCHHHHHHHH-HHh-cCCCEEEEECCCHHHHHHHc---CCc-cceEEEeCCceee
Confidence 457899999999999432 11134445555665 454 56799999999977666554 322 2357889999987
Q ss_pred eCCc--c----------CCcccHHHHHhchhhhhHHHHHhhcCCCCcccCCcCCCceEEEEEEcccc---hHHHHHHHHH
Q 014608 84 YGDA--M----------VPDNGWVEVLNQKWDKKIVTEEASRFPELKLQSETEQRPHKVSFYVDKDK---AQTVTQKLSE 148 (421)
Q Consensus 84 ~~~~--~----------~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ki~~~~~~~~---~~~~~~~l~~ 148 (421)
.... . .+...|...+..- ...+.+.....|+. ..+.+.+.+++++.... .+++...+.+
T Consensus 170 ~p~~g~~~~~~~~~~~~~~~~~~~~~i~~v--~~~l~~~~~~~pG~----~VE~K~~slavHYR~a~~~~~~~l~~~l~~ 243 (354)
T PLN02151 170 GPEQGSKYKKENQSLLCQPATEFLPVINEV--YKKLVEKTKSIPGA----KVENNKFCASVHFRCVEENKWSDLANQVRS 243 (354)
T ss_pred cCCCCccccccccccccccchhhHHHHHHH--HHHHHHHHhcCCCC----EEEecCcEEEEEeCCCChHHHHHHHHHHHH
Confidence 5321 0 0111122211110 00111222334443 34566777888775322 2334445555
Q ss_pred HHHhcCCcEEEEEEcCeeEEEecC-CCCHHHHHHHHHHHHhhCCCCC---CcEEEEcCCcCchhhhcCC-----CceEEE
Q 014608 149 IFKNRGLDVKIIYSGGMDLDILPQ-GAGKGQALAYLLRKFKCEGKVP---TNTLVCGDSGNDAELFSIP-----EVYGVM 219 (421)
Q Consensus 149 ~l~~~~~~~~v~~s~~~~ldI~p~-g~sKg~al~~L~~~l~~~gi~~---~~vl~~GDs~NDi~M~~~a-----gv~gva 219 (421)
.+.+. ..+.+ ..|...+|+.|. +++||.|+++|++.+ +... .-++++||+.+|.+||+.. | .||.
T Consensus 244 v~~~~-~~l~v-~~GkkVvEvrP~~~~dKG~Av~~Ll~~~---~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G-~gI~ 317 (354)
T PLN02151 244 VLKNY-PKLML-TQGRKVLEIRPIIKWDKGKALEFLLESL---GYANCTDVFPIYIGDDRTDEDAFKILRDKKQG-LGIL 317 (354)
T ss_pred HHhhC-CCcEE-ecCCEEEEEeCCCCCCHHHHHHHHHHhc---ccccCCCCeEEEEcCCCcHHHHHHHHhhcCCC-ccEE
Confidence 44443 23443 578999999995 999999999999998 6542 3489999999999999964 5 5788
Q ss_pred ecCChHHHHHHHHhhcCCCCceeeccCCCccHHHHHHHHhh
Q 014608 220 VSNAQEELLQWHAANAKNNPKLTHATERCAAGIIQAIGHFK 260 (421)
Q Consensus 220 v~NA~~elk~~a~~v~~~~~~~~~~~~~~~~GV~~~l~~~~ 260 (421)
|+..+.+- .|++... +.+.|.++|+.+.
T Consensus 318 Vg~~~k~T--~A~y~L~-----------dp~eV~~~L~~L~ 345 (354)
T PLN02151 318 VSKYAKET--NASYSLQ-----------EPDEVMEFLERLV 345 (354)
T ss_pred eccCCCCC--cceEeCC-----------CHHHHHHHHHHHH
Confidence 87543222 2333222 2567777777653
No 37
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=99.65 E-value=3.9e-16 Score=138.99 Aligned_cols=75 Identities=16% Similarity=0.186 Sum_probs=64.2
Q ss_pred CHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEecCChHHHHHHHHhhcCCCCceeeccCCCccHHHH
Q 014608 175 GKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMVSNAQEELLQWHAANAKNNPKLTHATERCAAGIIQ 254 (421)
Q Consensus 175 sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav~NA~~elk~~a~~v~~~~~~~~~~~~~~~~GV~~ 254 (421)
+|...++.+++++ |++++++++|||+.||++|++.+| +++||+||.+++|+.|++++.++. ++|++.
T Consensus 82 pkp~~~~~~~~~l---~~~~~ev~~iGD~~nDi~~~~~ag-~~~am~nA~~~lk~~A~~I~~~~~---------~~g~v~ 148 (169)
T TIGR02726 82 KKTEPYAQMLEEM---NISDAEVCYVGDDLVDLSMMKRVG-LAVAVGDAVADVKEAAAYVTTARG---------GHGAVR 148 (169)
T ss_pred CCHHHHHHHHHHc---CcCHHHEEEECCCHHHHHHHHHCC-CeEECcCchHHHHHhCCEEcCCCC---------CCCHHH
Confidence 5788999999999 999999999999999999999999 899999999999999988876543 666655
Q ss_pred HHHHhhCC
Q 014608 255 AIGHFKLG 262 (421)
Q Consensus 255 ~l~~~~l~ 262 (421)
.+.+++|.
T Consensus 149 e~~e~il~ 156 (169)
T TIGR02726 149 EVAELILK 156 (169)
T ss_pred HHHHHHHH
Confidence 55555453
No 38
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=99.60 E-value=4e-15 Score=130.97 Aligned_cols=75 Identities=19% Similarity=0.145 Sum_probs=66.4
Q ss_pred CHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEecCChHHHHHHHHhhcCCCCceeeccCCCccHHHH
Q 014608 175 GKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMVSNAQEELLQWHAANAKNNPKLTHATERCAAGIIQ 254 (421)
Q Consensus 175 sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav~NA~~elk~~a~~v~~~~~~~~~~~~~~~~GV~~ 254 (421)
+|+.+++.+++++ |+++++++++||+.||++|++.+| .+++|.|+.+.++..|++++.++. +++|+++
T Consensus 76 ~k~~~~~~~~~~~---~~~~~~~~~vGDs~~D~~~~~~ag-~~~~v~~~~~~~~~~a~~i~~~~~--------~~g~~~~ 143 (154)
T TIGR01670 76 NKLIAFSDILEKL---ALAPENVAYIGDDLIDWPVMEKVG-LSVAVADAHPLLIPRADYVTRIAG--------GRGAVRE 143 (154)
T ss_pred chHHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHCC-CeEecCCcCHHHHHhCCEEecCCC--------CCcHHHH
Confidence 4899999999999 999999999999999999999999 799999999999998887776543 3555999
Q ss_pred HHHHhhC
Q 014608 255 AIGHFKL 261 (421)
Q Consensus 255 ~l~~~~l 261 (421)
+++.++.
T Consensus 144 ~~~~~~~ 150 (154)
T TIGR01670 144 VCELLLL 150 (154)
T ss_pred HHHHHHH
Confidence 9988764
No 39
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=99.60 E-value=8.4e-15 Score=137.95 Aligned_cols=194 Identities=20% Similarity=0.261 Sum_probs=103.7
Q ss_pred EEeCCCCCCCCCCC---CCccHHHHHHHHHHHHcCCcEEEEEcCCCHHHHHHHHHhCCCCCCCEEEEccCcEEEeCCcc-
Q 014608 13 VSDLDHTMVDHHDA---ENLSLLRFNALWEAHYRRDSLLVFSTGRSPTLYKQLRKEKPMLTPDITIMSVGTEITYGDAM- 88 (421)
Q Consensus 13 ~~DLDGTLl~~~~~---~~~s~~~~~al~~~l~~~g~~vviaTGRs~~~~~~l~~~~~~~~~d~~I~~nGa~I~~~~~~- 88 (421)
++|+||||.+.... ...+......|.+.....+..++|+|||+......+. ++. .-+++++||+++...+.-
T Consensus 1 ~lDyDGTL~p~~~~p~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~~---~~~-~i~l~gehG~e~~~~~~~~ 76 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDPDAAVPPPELRELLRALAADPNNTVAIVSGRSLDDLERFG---GIP-NIGLAGEHGAEIRRPGGSE 76 (235)
T ss_dssp EEE-TTTSS---S-GGG----HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH----S-S-S-EEEEGGGTEEEETTE-E
T ss_pred CcccCCccCCCCCCccccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHhc---CCC-CceEEEEeeEEeccCcccc
Confidence 68999999976642 1223344555555555677899999999977633332 322 236789999999986541
Q ss_pred -CC--cc---cHHHHHhchhhhhHHHHHhhcCCCCcccCCcCCCceEEEEEEccc-------chHHHHHHHHHHHHhcCC
Q 014608 89 -VP--DN---GWVEVLNQKWDKKIVTEEASRFPELKLQSETEQRPHKVSFYVDKD-------KAQTVTQKLSEIFKNRGL 155 (421)
Q Consensus 89 -~~--~~---~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ki~~~~~~~-------~~~~~~~~l~~~l~~~~~ 155 (421)
.. .. .|.+.+.. .+.......++. ..+.+.+.+.++.... ...+..+.+.+.+... .
T Consensus 77 ~~~~~~~~~~~~~~~~~~-----~l~~~~~~~pG~----~iE~K~~sv~~Hyr~~~~~~~~~~~~~l~~~l~~~~~~~-~ 146 (235)
T PF02358_consen 77 WTNLPADEDLEWKDEVRE-----ILEYFAERTPGS----FIEDKEFSVAFHYRNAPPEFGEAQARELAEQLREILASH-P 146 (235)
T ss_dssp EE-TTGGGGHHHHHHHHH-----HHTTHHHHSTT-----EEEEETTEEEEE-TTS-ST----THHHHHHHHHHHHHHH--
T ss_pred ccccccccchHHHHHHHH-----HHHHHHhhccCc----EEEECCeEEEEEecCCCcchhhhHHHHHHHHHHHHHHhC-C
Confidence 11 11 12221111 111111223442 2455677788877432 2344445555544432 2
Q ss_pred cEEEEEEcCeeEEEecCCCCHHHHHHHHHHHHhhCCCC---CCcEEEEcCCcCchhhhcCCCc-----eEEEecCCh
Q 014608 156 DVKIIYSGGMDLDILPQGAGKGQALAYLLRKFKCEGKV---PTNTLVCGDSGNDAELFSIPEV-----YGVMVSNAQ 224 (421)
Q Consensus 156 ~~~v~~s~~~~ldI~p~g~sKg~al~~L~~~l~~~gi~---~~~vl~~GDs~NDi~M~~~agv-----~gvav~NA~ 224 (421)
.+.+ ..|...+|+.|.+.+||.|+++|++.+ +.. +.-++++||+.+|.+||+.+.- .++.|+...
T Consensus 147 ~~~v-~~g~~~vEvrp~~~~KG~av~~ll~~~---~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~ 219 (235)
T PF02358_consen 147 GLEV-VPGKKVVEVRPPGVNKGSAVRRLLEEL---PFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVS 219 (235)
T ss_dssp T-EE-EE-SSEEEEE-TT--HHHHHHHHHTTS------------EEEEESSHHHHHHHHTTTTS----EEEEES---
T ss_pred CEEE-EECCCEEEEEeCCCChHHHHHHHHHhc---CccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeec
Confidence 4554 477899999999999999999999998 543 7799999999999999998542 467777765
No 40
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=99.55 E-value=3.5e-13 Score=127.49 Aligned_cols=196 Identities=17% Similarity=0.166 Sum_probs=121.1
Q ss_pred cccCCCeEEEEeCCCCCCCCCC---CCCccHHHHHHHHHHHH-cCCcEEEEEcCCCHHHHHHHHHhCCCCCCCEEEEccC
Q 014608 4 LSAAARLMIVSDLDHTMVDHHD---AENLSLLRFNALWEAHY-RRDSLLVFSTGRSPTLYKQLRKEKPMLTPDITIMSVG 79 (421)
Q Consensus 4 l~~~~~klI~~DLDGTLl~~~~---~~~~s~~~~~al~~~l~-~~g~~vviaTGRs~~~~~~l~~~~~~~~~d~~I~~nG 79 (421)
+...+++++++|+||||..... ....+...++.|. .|. +....++|.|||++..+..+.... .-++|++||
T Consensus 13 ~~~a~~~~~~lDyDGTl~~i~~~p~~a~~~~~l~~lL~-~Las~~~~~v~iiSGR~~~~l~~~~~v~----~i~l~aehG 87 (266)
T COG1877 13 YLNARKRLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQ-DLASDPRNVVAIISGRSLAELERLFGVP----GIGLIAEHG 87 (266)
T ss_pred cccccceEEEEeccccccccccCccccCCCHHHHHHHH-HHHhcCCCeEEEEeCCCHHHHHHhcCCC----CccEEEecc
Confidence 3445789999999999987652 1222333344444 454 457789999999977666555521 124899999
Q ss_pred cEEEe-CCccC---CcccHHHHHhchhhhhHHHHHhhcCCCCcccCCcCCCceEEEEEEcccchH-HHHHHHHHHHHhcC
Q 014608 80 TEITY-GDAMV---PDNGWVEVLNQKWDKKIVTEEASRFPELKLQSETEQRPHKVSFYVDKDKAQ-TVTQKLSEIFKNRG 154 (421)
Q Consensus 80 a~I~~-~~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ki~~~~~~~~~~-~~~~~l~~~l~~~~ 154 (421)
+++.. +++.. ....+...+.+ -..++......+|+. ..+.+..-+.++......+ .....+........
T Consensus 88 a~~r~~~g~~~~~~~~~~~~~~~~~--v~~~l~~~v~r~pGs----~iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~~~~ 161 (266)
T COG1877 88 AEVRDPNGKWWINLAEEADLRWLKE--VAAILEYYVERTPGS----YIERKGFAVALHYRNAEDDEGAALALAEAATLIN 161 (266)
T ss_pred eEEecCCCCeeEecCHHHHhhHHHH--HHHHHHHHhhcCCCe----EEEEcCcEEEEeeccCCchhhHHHHHHHHHhccc
Confidence 99954 33321 11111111110 001222333445553 3445566677776533222 22233333333222
Q ss_pred Cc-EEEEEEcCeeEEEecCCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCC
Q 014608 155 LD-VKIIYSGGMDLDILPQGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPE 214 (421)
Q Consensus 155 ~~-~~v~~s~~~~ldI~p~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~ag 214 (421)
.. ++ ++.|...+++.|.++|||.+++++++.+ .....-+++.||+..|..||+.+.
T Consensus 162 ~~~~~-v~~gk~vVEvrp~~~~KG~a~~~i~~~~---~~~~~~~~~aGDD~TDE~~F~~v~ 218 (266)
T COG1877 162 ELKLR-VTPGKMVVELRPPGVSKGAAIKYIMDEL---PFDGRFPIFAGDDLTDEDAFAAVN 218 (266)
T ss_pred cccEE-EEeCceEEEEeeCCcchHHHHHHHHhcC---CCCCCcceecCCCCccHHHHHhhc
Confidence 22 44 4578999999999999999999999998 555557999999999999999875
No 41
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=99.54 E-value=2e-14 Score=130.14 Aligned_cols=74 Identities=22% Similarity=0.208 Sum_probs=64.0
Q ss_pred CHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEecCChHHHHHHHHhhcCCCCceeeccCCCccHHHH
Q 014608 175 GKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMVSNAQEELLQWHAANAKNNPKLTHATERCAAGIIQ 254 (421)
Q Consensus 175 sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav~NA~~elk~~a~~v~~~~~~~~~~~~~~~~GV~~ 254 (421)
+|+.+++.+++++ |++++++++|||+.||++|++.+| .+++|+++.+.++..|++++..+ +.+|..+
T Consensus 96 ~k~~~l~~~~~~~---gl~~~ev~~VGDs~~D~~~a~~aG-~~~~v~~~~~~~~~~a~~v~~~~---------~g~g~~~ 162 (183)
T PRK09484 96 NKLIAFSDLLEKL---AIAPEQVAYIGDDLIDWPVMEKVG-LSVAVADAHPLLLPRADYVTRIA---------GGRGAVR 162 (183)
T ss_pred cHHHHHHHHHHHh---CCCHHHEEEECCCHHHHHHHHHCC-CeEecCChhHHHHHhCCEEecCC---------CCCCHHH
Confidence 3778999999999 999999999999999999999999 78999999998888877776543 4778888
Q ss_pred HHHHhhC
Q 014608 255 AIGHFKL 261 (421)
Q Consensus 255 ~l~~~~l 261 (421)
.|.++++
T Consensus 163 el~~~i~ 169 (183)
T PRK09484 163 EVCDLLL 169 (183)
T ss_pred HHHHHHH
Confidence 8877665
No 42
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=99.52 E-value=5.8e-13 Score=145.18 Aligned_cols=197 Identities=13% Similarity=0.155 Sum_probs=122.8
Q ss_pred cccCCCeEEEEeCCCCCCCCCCC------CCccHHHHHHHHHHHHcCCcEEEEEcCCCHHHHHHHHHhCCCCCCCEEEEc
Q 014608 4 LSAAARLMIVSDLDHTMVDHHDA------ENLSLLRFNALWEAHYRRDSLLVFSTGRSPTLYKQLRKEKPMLTPDITIMS 77 (421)
Q Consensus 4 l~~~~~klI~~DLDGTLl~~~~~------~~~s~~~~~al~~~l~~~g~~vviaTGRs~~~~~~l~~~~~~~~~d~~I~~ 77 (421)
+..++++++++|+||||++..+. ...+....+.|.+...+.+..|+|+|||+...+..+....+ -+++++
T Consensus 502 y~~a~~rll~LDyDGTL~~~~~~~~~p~~a~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~----l~l~ae 577 (797)
T PLN03063 502 YSKSNNRLLILGFYGTLTEPRNSQIKEMDLGLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGEYN----IWLAAE 577 (797)
T ss_pred HHhccCeEEEEecCccccCCCCCccccccCCCCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCCCC----CcEEEe
Confidence 34556799999999999965321 11333445566655567799999999999777666665322 347999
Q ss_pred cCcEEEeCCccCCcccHHH----HHhchhhhh---HHHHHhhcCCCCcccCCcCCCceEEEEEEcccchH---HHHHHHH
Q 014608 78 VGTEITYGDAMVPDNGWVE----VLNQKWDKK---IVTEEASRFPELKLQSETEQRPHKVSFYVDKDKAQ---TVTQKLS 147 (421)
Q Consensus 78 nGa~I~~~~~~~~~~~~~~----~l~~~~~~~---~~~~~~~~~~~l~~~~~~~~~~~ki~~~~~~~~~~---~~~~~l~ 147 (421)
||+++...+. .|.. .++..|... .+.......|+ ...+.+...+.++....+.+ .....+.
T Consensus 578 HG~~~r~~~~-----~w~~~~~~~~~~~w~~~v~~~l~~~~~rtpG----s~iE~K~~sla~HyR~adp~~g~~~a~el~ 648 (797)
T PLN03063 578 NGMFLRHTSG-----EWVTTMPEHMNLDWVDGVKNVFKYFTDRTPR----SYVEKSETSLVWNYEYADVEFGRAQARDML 648 (797)
T ss_pred CCEEEecCCC-----ceeeccccccChhHHHHHHHHHHHHHHhCCC----cEEEEcCeEEEEEcCCCChHHHHHHHHHHH
Confidence 9999764211 1110 011123211 11122233444 34566777788777533211 2233444
Q ss_pred HHHHhc---CCcEEEEEEcCeeEEEecCCCCHHHHHHHHHHHHhhC---CCCCCcEEEEcCCc-CchhhhcCCC
Q 014608 148 EIFKNR---GLDVKIIYSGGMDLDILPQGAGKGQALAYLLRKFKCE---GKVPTNTLVCGDSG-NDAELFSIPE 214 (421)
Q Consensus 148 ~~l~~~---~~~~~v~~s~~~~ldI~p~g~sKg~al~~L~~~l~~~---gi~~~~vl~~GDs~-NDi~M~~~ag 214 (421)
+.+.+. ..++.+ ..|...+|+.|+++|||.|++.|++++... +..++-++++||.. .|.+||+...
T Consensus 649 ~~l~~~~~~~~~~~v-~~Gk~vvEvrp~gvnKG~Av~~ll~~~~~~~~~~~~~dfvl~~Gdd~~~DEdmF~~l~ 721 (797)
T PLN03063 649 QHLWAGPISNASVDV-VRGQKSVEVHAIGVTKGAAIGRILGEIVHNKSMTTPIDFVFCSGYFLEKDEDVYTFFE 721 (797)
T ss_pred HHHHHhhccCCCcEE-EECCeEEEEEcCCCChHHHHHHHHHHhhhccccCCCCCEEEEeCCCCCCcHHHHHhcc
Confidence 444211 224554 588999999999999999999999986211 23568899999984 5999999764
No 43
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=99.51 E-value=5.5e-13 Score=145.25 Aligned_cols=197 Identities=15% Similarity=0.209 Sum_probs=124.0
Q ss_pred cccCCCeEEEEeCCCCCCCCCCCC------------CccHHHHHHHHHHHHcCCcEEEEEcCCCHHHHHHHHHhCCCCCC
Q 014608 4 LSAAARLMIVSDLDHTMVDHHDAE------------NLSLLRFNALWEAHYRRDSLLVFSTGRSPTLYKQLRKEKPMLTP 71 (421)
Q Consensus 4 l~~~~~klI~~DLDGTLl~~~~~~------------~~s~~~~~al~~~l~~~g~~vviaTGRs~~~~~~l~~~~~~~~~ 71 (421)
+..++.++|++|+||||++..+.. ..+......|.+.+.+.+..|+|+|||+...+..+...++
T Consensus 586 y~~a~~RLlfLDyDGTLap~~~~P~~~~~~~~~~~a~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~~---- 661 (934)
T PLN03064 586 YLQSNNRLLILGFNATLTEPVDTPGRRGDQIKEMELRLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEFD---- 661 (934)
T ss_pred HHhccceEEEEecCceeccCCCCcccccccccccccCCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCCC----
Confidence 445568999999999998753211 1223335556655567899999999999877766665433
Q ss_pred CEEEEccCcEEEeCCccCCcccHH----HHHhchhhhh---HHHHHhhcCCCCcccCCcCCCceEEEEEEcccch---HH
Q 014608 72 DITIMSVGTEITYGDAMVPDNGWV----EVLNQKWDKK---IVTEEASRFPELKLQSETEQRPHKVSFYVDKDKA---QT 141 (421)
Q Consensus 72 d~~I~~nGa~I~~~~~~~~~~~~~----~~l~~~~~~~---~~~~~~~~~~~l~~~~~~~~~~~ki~~~~~~~~~---~~ 141 (421)
-+++++||+++...+. .|. ..++..|... ++.......|+ ...+.+...+.++....+. ..
T Consensus 662 L~LaAEHG~~~R~~~~-----~w~~~~~~~~~~~W~~~v~~ile~~~eRtPG----S~IE~K~~SLawHYR~ADpe~g~~ 732 (934)
T PLN03064 662 MWLAAENGMFLRHTKG-----EWMTTMPEHLNMDWVDSVKHVFEYFTERTPR----SHFETRETSLVWNYKYADVEFGRL 732 (934)
T ss_pred ceEEeeCCeEEecCCC-----cceeccccccchHHHHHHHHHHHHHHhcCCC----cEEEEcCcEEEEEecCCChhhHHH
Confidence 3589999999764321 121 0111123221 11122233344 3456677788887753321 11
Q ss_pred HHHHHHHHHHh-c--CCcEEEEEEcCeeEEEecCCCCHHHHHHHHHHHHhhCC---CCCCcEEEEcCCcC-chhhhcCCC
Q 014608 142 VTQKLSEIFKN-R--GLDVKIIYSGGMDLDILPQGAGKGQALAYLLRKFKCEG---KVPTNTLVCGDSGN-DAELFSIPE 214 (421)
Q Consensus 142 ~~~~l~~~l~~-~--~~~~~v~~s~~~~ldI~p~g~sKg~al~~L~~~l~~~g---i~~~~vl~~GDs~N-Di~M~~~ag 214 (421)
....+.+.+.. . +..+.+ ..|...+|+.|.++|||.|++.|++++...+ -+++-++++||+.. |.+||+...
T Consensus 733 qA~el~~~L~~~~~~~~~v~V-~~Gk~VVEVrP~gvnKG~Av~~ll~~~~~~~~~~~~~DFvlc~GDd~~~DEdmF~~l~ 811 (934)
T PLN03064 733 QARDMLQHLWTGPISNAAVDV-VQGSRSVEVRPVGVTKGAAIDRILGEIVHSKSMTTPIDYVLCIGHFLGKDEDIYTFFE 811 (934)
T ss_pred HHHHHHHHHHhhhccCCCcEE-EeCCeEEEEEcCCCCHHHHHHHHHHhhhhccccCCCCCEEEEeCCCCCCcHHHHHHHh
Confidence 13344444421 1 234554 5789999999999999999999999873211 25789999999875 999999754
No 44
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.47 E-value=3.6e-13 Score=132.10 Aligned_cols=72 Identities=15% Similarity=0.252 Sum_probs=64.2
Q ss_pred CCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEecCChHHHHHHHHhhcCCCCceeeccCCCccHH
Q 014608 173 GAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMVSNAQEELLQWHAANAKNNPKLTHATERCAAGI 252 (421)
Q Consensus 173 g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav~NA~~elk~~a~~v~~~~~~~~~~~~~~~~GV 252 (421)
+.+|+.+++.+++++ |+++++|++|||+.||++|++.+| .+||| ||.|.||+.|+.++.++ +-+||
T Consensus 246 ~k~K~~~L~~la~~l---gi~~~qtIaVGDg~NDl~m~~~AG-lgiA~-nAkp~Vk~~Ad~~i~~~---------~l~~~ 311 (322)
T PRK11133 246 AQYKADTLTRLAQEY---EIPLAQTVAIGDGANDLPMIKAAG-LGIAY-HAKPKVNEQAQVTIRHA---------DLMGV 311 (322)
T ss_pred cccHHHHHHHHHHHc---CCChhhEEEEECCHHHHHHHHHCC-CeEEe-CCCHHHHhhCCEEecCc---------CHHHH
Confidence 468999999999999 999999999999999999999999 89999 99999999988776543 47888
Q ss_pred HHHHHH
Q 014608 253 IQAIGH 258 (421)
Q Consensus 253 ~~~l~~ 258 (421)
+..|..
T Consensus 312 l~~~~~ 317 (322)
T PRK11133 312 LCILSG 317 (322)
T ss_pred HHHhcc
Confidence 877643
No 45
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=99.45 E-value=2.8e-13 Score=115.40 Aligned_cols=60 Identities=23% Similarity=0.195 Sum_probs=56.8
Q ss_pred CHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEecCChHHHHHHHHhhcCCC
Q 014608 175 GKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMVSNAQEELLQWHAANAKNN 238 (421)
Q Consensus 175 sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav~NA~~elk~~a~~v~~~~ 238 (421)
+|-.+...|++++ ++.+++|.++||+.||+++|+.+| .+|||.+|+|++++.|++|+..+
T Consensus 83 dK~~a~~~L~~~~---~l~~e~~ayiGDD~~Dlpvm~~vG-ls~a~~dAh~~v~~~a~~Vt~~~ 142 (170)
T COG1778 83 DKLAAFEELLKKL---NLDPEEVAYVGDDLVDLPVMEKVG-LSVAVADAHPLLKQRADYVTSKK 142 (170)
T ss_pred hHHHHHHHHHHHh---CCCHHHhhhhcCccccHHHHHHcC-CcccccccCHHHHHhhHhhhhcc
Confidence 5888999999999 999999999999999999999999 89999999999999999998654
No 46
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=99.31 E-value=4.5e-11 Score=105.55 Aligned_cols=210 Identities=19% Similarity=0.265 Sum_probs=130.6
Q ss_pred cCCCeEEEEeCCCCCCCCCCCCCccHHHHHHHHHHHHcCCcEEEEEcCCCHHHHHHHHHhCC---CCCCCEEEEccCcEE
Q 014608 6 AAARLMIVSDLDHTMVDHHDAENLSLLRFNALWEAHYRRDSLLVFSTGRSPTLYKQLRKEKP---MLTPDITIMSVGTEI 82 (421)
Q Consensus 6 ~~~~klI~~DLDGTLl~~~~~~~~s~~~~~al~~~l~~~g~~vviaTGRs~~~~~~l~~~~~---~~~~d~~I~~nGa~I 82 (421)
..+.-++.||.||||...+...+.. +...++.+ ++-+.+.++-|-.++. +.++++ +..+||...+||..-
T Consensus 8 r~~~~l~lfdvdgtLt~~r~~~~~e---~~~~l~~l-r~~v~ig~VggsDl~k---~~eqlG~~Vl~~fDY~F~ENGl~~ 80 (252)
T KOG3189|consen 8 RDEETLCLFDVDGTLTPPRQKVTPE---MLEFLQKL-RKKVTIGFVGGSDLSK---QQEQLGDNVLEEFDYVFSENGLVA 80 (252)
T ss_pred cCCceEEEEecCCccccccccCCHH---HHHHHHHH-hhheEEEEeecHHHHH---HHHHhchhHHhhhcccccCCCeeE
Confidence 3455799999999999988654332 22333233 4677888898887553 333333 235799999999999
Q ss_pred EeCCccCCcccHHHHHhchhhhhHHHHHhhcCCCCcc--c--C--CcCCCceEEEEEE--------------c-ccc-hH
Q 014608 83 TYGDAMVPDNGWVEVLNQKWDKKIVTEEASRFPELKL--Q--S--ETEQRPHKVSFYV--------------D-KDK-AQ 140 (421)
Q Consensus 83 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~--~--~--~~~~~~~ki~~~~--------------~-~~~-~~ 140 (421)
+.+++....+.++..+-.....+.+.-.+.++..+.. . . +.......++-+. + +.+ .+
T Consensus 81 yk~gk~~~~Qsi~~~LGee~~q~liNF~LrYlsdidlPiKRGtFiEFRNgMiNvsPIGR~cs~EER~eF~e~Dkk~~iR~ 160 (252)
T KOG3189|consen 81 YKGGKLLSKQSIINHLGEEKLQELINFCLRYLSDIDLPIKRGTFIEFRNGMINVSPIGRNCSQEERNEFEELDKKHKIRE 160 (252)
T ss_pred eeCCcchhHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcccccceEEecCCceeccccccccCHHHHHHHHHhhhhhhhHH
Confidence 9888877666555544332211111111111111110 0 0 0001111111111 0 111 23
Q ss_pred HHHHHHHHHHHhcCCcEEEEEEcCeeEEEecCCCCHHHHHHHHHHHHhhCCCCCCcEEEEcC----CcCchhhhcCCCce
Q 014608 141 TVTQKLSEIFKNRGLDVKIIYSGGMDLDILPQGAGKGQALAYLLRKFKCEGKVPTNTLVCGD----SGNDAELFSIPEVY 216 (421)
Q Consensus 141 ~~~~~l~~~l~~~~~~~~v~~s~~~~ldI~p~g~sKg~al~~L~~~l~~~gi~~~~vl~~GD----s~NDi~M~~~agv~ 216 (421)
..++.|++.++..+ +.....|...+|+.|+|++|-.-|+++-+. | -+++.+||| ++||.+.|......
T Consensus 161 K~v~~Lr~~F~~~g--LtFSIGGQISfDvFP~GWDKtyCLqhle~d----g--f~~IhFFGDkT~~GGNDyEIf~dprti 232 (252)
T KOG3189|consen 161 KFVEALREEFADYG--LTFSIGGQISFDVFPKGWDKTYCLQHLEKD----G--FDTIHFFGDKTMPGGNDYEIFADPRTI 232 (252)
T ss_pred HHHHHHHHHhcccC--eeEEECCeEEEeecCCCcchhHHHHHhhhc----C--CceEEEeccccCCCCCcceeeeCCccc
Confidence 35566777776544 443445667899999999999999988664 2 389999999 89999999999888
Q ss_pred EEEecCChHHHHHH
Q 014608 217 GVMVSNAQEELLQW 230 (421)
Q Consensus 217 gvav~NA~~elk~~ 230 (421)
|..|.+..+..+..
T Consensus 233 GhsV~~PdDT~~~~ 246 (252)
T KOG3189|consen 233 GHSVTSPDDTVRIC 246 (252)
T ss_pred cccccCchHHHHHH
Confidence 99999988888764
No 47
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=99.18 E-value=6e-10 Score=103.08 Aligned_cols=103 Identities=20% Similarity=0.252 Sum_probs=73.8
Q ss_pred CCCceEEEEEEcccchHHHHHHHHHHHHhc---CCcEEEE---EEcCeeEEEecCCCCHHHHHHHHHHHHhhCCCCCCcE
Q 014608 124 EQRPHKVSFYVDKDKAQTVTQKLSEIFKNR---GLDVKII---YSGGMDLDILPQGAGKGQALAYLLRKFKCEGKVPTNT 197 (421)
Q Consensus 124 ~~~~~ki~~~~~~~~~~~~~~~l~~~l~~~---~~~~~v~---~s~~~~ldI~p~g~sKg~al~~L~~~l~~~gi~~~~v 197 (421)
....+++.++.. ....+.+.+.+.+.-. +..+.+. ++ +..+-..-.+-+|..+++.+++.+ |++++++
T Consensus 90 k~~G~~v~iiSg--g~~~lv~~ia~~lg~d~~~an~l~~~dG~lt-G~v~g~~~~~~~K~~~l~~~~~~~---g~~~~~~ 163 (212)
T COG0560 90 KAAGAKVVIISG--GFTFLVEPIAERLGIDYVVANELEIDDGKLT-GRVVGPICDGEGKAKALRELAAEL---GIPLEET 163 (212)
T ss_pred HHCCCEEEEEcC--ChHHHHHHHHHHhCCchheeeEEEEeCCEEe-ceeeeeecCcchHHHHHHHHHHHc---CCCHHHe
Confidence 445667776654 3345667777766421 1112221 12 223333344567999999999999 9999999
Q ss_pred EEEcCCcCchhhhcCCCceEEEecCChHHHHHHHHhh
Q 014608 198 LVCGDSGNDAELFSIPEVYGVMVSNAQEELLQWHAAN 234 (421)
Q Consensus 198 l~~GDs~NDi~M~~~agv~gvav~NA~~elk~~a~~v 234 (421)
+++|||.||++||+.+| +++++ |+.+++++.|+..
T Consensus 164 ~a~gDs~nDlpml~~ag-~~ia~-n~~~~l~~~a~~~ 198 (212)
T COG0560 164 VAYGDSANDLPMLEAAG-LPIAV-NPKPKLRALADVR 198 (212)
T ss_pred EEEcCchhhHHHHHhCC-CCeEe-CcCHHHHHHHHHh
Confidence 99999999999999999 99997 9999999988653
No 48
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=99.11 E-value=4.1e-10 Score=95.01 Aligned_cols=132 Identities=24% Similarity=0.219 Sum_probs=85.5
Q ss_pred EEEEeCCCCCCCCCCC------CCccHHHHHHHHHHHHcCCcEEEEEcCCCHHHHHHHHHhCCCCC-CCEEEEccCcEEE
Q 014608 11 MIVSDLDHTMVDHHDA------ENLSLLRFNALWEAHYRRDSLLVFSTGRSPTLYKQLRKEKPMLT-PDITIMSVGTEIT 83 (421)
Q Consensus 11 lI~~DLDGTLl~~~~~------~~~s~~~~~al~~~l~~~g~~vviaTGRs~~~~~~l~~~~~~~~-~d~~I~~nGa~I~ 83 (421)
+++||+||||++.... ...... ...+++.++++|+.++++|||....+....+.+++.. ++.++++++....
T Consensus 1 ~~vfD~D~tl~~~~~~~~~~~~~~~~~~-~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 79 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIAEIEELELYPG-VKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIY 79 (139)
T ss_pred CeEEccCCceEccCccccccccCCcCcC-HHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhh
Confidence 4899999999988741 111112 2233446788899999999999888888877766421 1222222211100
Q ss_pred eCCccCCcccHHHHHhchhhhhHHHHHhhcCCCCcccCCcCCCceEEEEEEcccchHHHHHHHHHHHHhcCCcEEEEEEc
Q 014608 84 YGDAMVPDNGWVEVLNQKWDKKIVTEEASRFPELKLQSETEQRPHKVSFYVDKDKAQTVTQKLSEIFKNRGLDVKIIYSG 163 (421)
Q Consensus 84 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~s~ 163 (421)
.... ... .
T Consensus 80 ~~~~-------------------------------------~~~----~------------------------------- 87 (139)
T cd01427 80 YPKE-------------------------------------GLF----L------------------------------- 87 (139)
T ss_pred cccc-------------------------------------ccc----c-------------------------------
Confidence 0000 000 0
Q ss_pred CeeEEEecCCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEe
Q 014608 164 GMDLDILPQGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMV 220 (421)
Q Consensus 164 ~~~ldI~p~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav 220 (421)
......-+.+|...++.+++++ ++++++++++||+.||++|++.+|+.+++|
T Consensus 88 --~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~igD~~~d~~~~~~~g~~~i~v 139 (139)
T cd01427 88 --GGGPFDIGKPNPDKLLAALKLL---GVDPEEVLMVGDSLNDIEMAKAAGGLGVAV 139 (139)
T ss_pred --cccccccCCCCHHHHHHHHHHc---CCChhhEEEeCCCHHHHHHHHHcCCceeeC
Confidence 1122333456889999999999 888999999999999999999977677654
No 49
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=99.06 E-value=8.8e-11 Score=109.50 Aligned_cols=101 Identities=24% Similarity=0.214 Sum_probs=67.2
Q ss_pred cCCCCccc-CCcCCCceEEEEEEcccchHHHHHHHHHHHHhcCCcEEEEEEcCeeEEEecCCCCHHHHHHHHHHHHhhCC
Q 014608 113 RFPELKLQ-SETEQRPHKVSFYVDKDKAQTVTQKLSEIFKNRGLDVKIIYSGGMDLDILPQGAGKGQALAYLLRKFKCEG 191 (421)
Q Consensus 113 ~~~~l~~~-~~~~~~~~ki~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~s~~~~ldI~p~g~sKg~al~~L~~~l~~~g 191 (421)
.|+++... .......+++.+.+.+. ....+.+.+.+.- ..-+..++. .+-.+....+...+..+++++ |
T Consensus 90 ~~~gv~e~L~~L~~~g~~l~i~T~k~--~~~~~~~l~~~gl-~~~F~~i~g----~~~~~~~KP~P~~l~~~~~~~---~ 159 (220)
T COG0546 90 LFPGVKELLAALKSAGYKLGIVTNKP--ERELDILLKALGL-ADYFDVIVG----GDDVPPPKPDPEPLLLLLEKL---G 159 (220)
T ss_pred cCCCHHHHHHHHHhCCCeEEEEeCCc--HHHHHHHHHHhCC-ccccceEEc----CCCCCCCCcCHHHHHHHHHHh---C
Confidence 45554431 23445567877777632 3334455444321 111222322 345566667899999999999 9
Q ss_pred CCCCcEEEEcCCcCchhhhcCCCceEEEecCC
Q 014608 192 KVPTNTLVCGDSGNDAELFSIPEVYGVMVSNA 223 (421)
Q Consensus 192 i~~~~vl~~GDs~NDi~M~~~agv~gvav~NA 223 (421)
+++++++++||+.+|+.|.+.+|+.+|+|..+
T Consensus 160 ~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g 191 (220)
T COG0546 160 LDPEEALMVGDSLNDILAAKAAGVPAVGVTWG 191 (220)
T ss_pred CChhheEEECCCHHHHHHHHHcCCCEEEEECC
Confidence 98889999999999999999999666777664
No 50
>PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5.4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A.
Probab=99.03 E-value=1.3e-09 Score=99.16 Aligned_cols=182 Identities=18% Similarity=0.224 Sum_probs=106.8
Q ss_pred HHHcCCcEEEEEcCCCHHHHHHHHH-hCCCCCCCEEEEccCcEEEeCCccCCcccHHHHHhchhhhh---HHHHHhhcCC
Q 014608 40 AHYRRDSLLVFSTGRSPTLYKQLRK-EKPMLTPDITIMSVGTEITYGDAMVPDNGWVEVLNQKWDKK---IVTEEASRFP 115 (421)
Q Consensus 40 ~l~~~g~~vviaTGRs~~~~~~l~~-~~~~~~~d~~I~~nGa~I~~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~ 115 (421)
+| .+.+.+++++|-.+.....-+. .--+..+||+...||...|..+.......+.+.+...-... .+....+.+
T Consensus 7 ~L-~~~~~vgvVgGsd~~k~~eQl~~~~~~~~fdy~f~enG~~~y~~~~~~~~~~~~~~lgee~~~~~in~~l~~~~~l- 84 (220)
T PF03332_consen 7 KL-RKKVPVGVVGGSDLPKIQEQLGGDDVLDNFDYVFPENGLVAYKNGELIWSQSIAEFLGEEKLQKLINFCLRYISDL- 84 (220)
T ss_dssp HH-HTTSEEEEEESS-HHHHHHHHSTTTHHHH-SEEEEGGGTEEEETTEEEEE--HHHHHHHHHHHHHHHHHHHHHHT--
T ss_pred HH-HhcCeEEEEcchhHHHHHHHHcccchHhhCCeeecCCCCeEEECCCchhhHhHHHHcCHHHHHHHHHHHHHHHHhC-
Confidence 44 3679999999999764433221 11112468999999999998876665555554443321111 111222211
Q ss_pred CCc--ccCCcCCCceEEEEEE--ccc------------c----hHHHHHHHHHHHHhcCCcEEEEEEcCeeEEEecCCCC
Q 014608 116 ELK--LQSETEQRPHKVSFYV--DKD------------K----AQTVTQKLSEIFKNRGLDVKIIYSGGMDLDILPQGAG 175 (421)
Q Consensus 116 ~l~--~~~~~~~~~~ki~~~~--~~~------------~----~~~~~~~l~~~l~~~~~~~~v~~s~~~~ldI~p~g~s 175 (421)
.++ .-...+.+..-+.+-. ... . .+.+++.|.+.|++ .++.+...|...+||.|+|++
T Consensus 85 ~lp~krGtfIE~R~gmIn~SpiGr~a~~eer~~f~~~D~~~~iR~~~v~~L~~~f~d--~~L~~siGGqiSiDvfp~GwD 162 (220)
T PF03332_consen 85 DLPVKRGTFIEFRGGMINFSPIGRNASQEERDEFDEYDKKHKIREKLVEALKKEFPD--FGLTFSIGGQISIDVFPKGWD 162 (220)
T ss_dssp --S---S-SEEEESSEEEE-SS-TTS-HHHHHHHHHHHHHHTHHHHHHHHHHHHTCC--CSEEEEEETTTEEEEEETT-S
T ss_pred CCCccCCCceeecCCcEEECcccCcCCHHHHHhhhhcChhhhHHHHHHHHHHHHCCC--CceEEecCCceEEccccCCcc
Confidence 111 1112222332333221 110 0 11233444444443 246666678899999999999
Q ss_pred HHHHHHHHHHHHhhCCCCCCcEEEEcC----CcCchhhhcCCCceEEEecCChHHHHHHH
Q 014608 176 KGQALAYLLRKFKCEGKVPTNTLVCGD----SGNDAELFSIPEVYGVMVSNAQEELLQWH 231 (421)
Q Consensus 176 Kg~al~~L~~~l~~~gi~~~~vl~~GD----s~NDi~M~~~agv~gvav~NA~~elk~~a 231 (421)
|..+|++|.+.. .+++++||| ++||.|++...++.|+.|.+..+.++.+.
T Consensus 163 Kty~Lr~l~~~~------~~~I~FfGDkt~pGGNDyei~~~~rt~g~~V~~p~DT~~~l~ 216 (220)
T PF03332_consen 163 KTYCLRHLEDEG------FDEIHFFGDKTFPGGNDYEIFEDPRTIGHTVTSPEDTIKQLK 216 (220)
T ss_dssp GGGGGGGTTTTT-------SEEEEEESS-STTSTTHHHHHSTTSEEEE-SSHHHHHHHHH
T ss_pred HHHHHHHHHhcc------cceEEEEehhccCCCCCceeeecCCccEEEeCCHHHHHHHHH
Confidence 999999986632 599999999 89999999999889999999998887753
No 51
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.99 E-value=1.2e-08 Score=94.81 Aligned_cols=59 Identities=34% Similarity=0.458 Sum_probs=52.7
Q ss_pred CCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEecCChHHHHHHHHhhcCC
Q 014608 174 AGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMVSNAQEELLQWHAANAKN 237 (421)
Q Consensus 174 ~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav~NA~~elk~~a~~v~~~ 237 (421)
.+|+..++.+++++ ++++++|++||||.||+++++.+| .++++ |+.+.+++.|+++..+
T Consensus 151 ~~k~~~~~~~~~~~---~~~~~~~i~iGDs~~Di~aa~~ag-~~i~~-~~~~~~~~~a~~~i~~ 209 (219)
T TIGR00338 151 SYKGKTLLILLRKE---GISPENTVAVGDGANDLSMIKAAG-LGIAF-NAKPKLQQKADICINK 209 (219)
T ss_pred cccHHHHHHHHHHc---CCCHHHEEEEECCHHHHHHHHhCC-CeEEe-CCCHHHHHhchhccCC
Confidence 35999999999999 999999999999999999999999 78987 6788899888877654
No 52
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=98.97 E-value=2.1e-08 Score=95.33 Aligned_cols=195 Identities=15% Similarity=0.153 Sum_probs=106.9
Q ss_pred CeEEEEeCCCCCCCCCCCCCccHHHHHHHHHHHHcCCcEEEEEcC---CCHHHHHHHHHhCCCC-CCCEEEEccCcEEEe
Q 014608 9 RLMIVSDLDHTMVDHHDAENLSLLRFNALWEAHYRRDSLLVFSTG---RSPTLYKQLRKEKPML-TPDITIMSVGTEITY 84 (421)
Q Consensus 9 ~klI~~DLDGTLl~~~~~~~~s~~~~~al~~~l~~~g~~vviaTG---Rs~~~~~~l~~~~~~~-~~d~~I~~nGa~I~~ 84 (421)
.+.++||+||||++.+.... .+.+++. +++++|..++++|| |++..+....+.+++. .++-+|+++++.+.+
T Consensus 1 ~~~~~~D~DGtl~~~~~~i~---~a~~~l~-~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~~~~iit~~~~~~~~ 76 (249)
T TIGR01457 1 YKGYLIDLDGTMYKGKERIP---EAETFVH-ELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPATLETVFTASMATADY 76 (249)
T ss_pred CCEEEEeCCCceEcCCeeCc---CHHHHHH-HHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEeeHHHHHHHH
Confidence 36899999999999876433 2355555 67889999999995 8888888888888764 235677777765332
Q ss_pred CCccCCcc-cHHHHHhchhhhhHHHHHhhcCCCCcccCCcCCCceEEEEEEccc-chHHHHHHHHHHHHhcCCcEEEEEE
Q 014608 85 GDAMVPDN-GWVEVLNQKWDKKIVTEEASRFPELKLQSETEQRPHKVSFYVDKD-KAQTVTQKLSEIFKNRGLDVKIIYS 162 (421)
Q Consensus 85 ~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ki~~~~~~~-~~~~~~~~l~~~l~~~~~~~~v~~s 162 (421)
-....+.. .+ . .......+....+ ++... ...+.-+.+..+.. .-++....+ ..+.. +.. ++.+
T Consensus 77 l~~~~~~~~v~--~----lg~~~l~~~l~~~-g~~~~---~~~~~~Vvvg~~~~~~y~~l~~a~-~~l~~-g~~--~i~t 142 (249)
T TIGR01457 77 MNDLKLEKTVY--V----IGEEGLKEAIKEA-GYVED---KEKPDYVVVGLDRQIDYEKFATAT-LAIRK-GAH--FIGT 142 (249)
T ss_pred HHhcCCCCEEE--E----EcChhHHHHHHHc-CCEec---CCCCCEEEEeCCCCCCHHHHHHHH-HHHHC-CCe--EEEE
Confidence 10000000 00 0 0000001111111 11100 00111111111111 111111111 11111 111 1111
Q ss_pred cC------------------------eeEEEecCCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCc-CchhhhcCCCceE
Q 014608 163 GG------------------------MDLDILPQGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSG-NDAELFSIPEVYG 217 (421)
Q Consensus 163 ~~------------------------~~ldI~p~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~-NDi~M~~~agv~g 217 (421)
+. ...+....+.++...++.+++.+ +++++++++|||+. +|+.+.+.+|+.+
T Consensus 143 N~D~~~~~~~~~~~~~G~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~~---~~~~~~~~~VGD~~~~Di~~a~~~G~~~ 219 (249)
T TIGR01457 143 NGDLAIPTERGLLPGNGSLITVLEVATGVKPVYIGKPNAIIMEKAVEHL---GTEREETLMVGDNYLTDIRAGIDAGIDT 219 (249)
T ss_pred CCCCCCCCCCCCCCCcHHHHHHHHHHhCCCccccCCChHHHHHHHHHHc---CCCcccEEEECCCchhhHHHHHHcCCcE
Confidence 10 01122334566788999999999 99999999999996 8999999999888
Q ss_pred EEecCCh
Q 014608 218 VMVSNAQ 224 (421)
Q Consensus 218 vav~NA~ 224 (421)
+.|....
T Consensus 220 v~v~~G~ 226 (249)
T TIGR01457 220 LLVHTGV 226 (249)
T ss_pred EEEcCCC
Confidence 8887664
No 53
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=98.94 E-value=1.6e-09 Score=100.38 Aligned_cols=53 Identities=17% Similarity=0.140 Sum_probs=46.8
Q ss_pred EEecCCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEecCC
Q 014608 168 DILPQGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMVSNA 223 (421)
Q Consensus 168 dI~p~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav~NA 223 (421)
+....+.+|+..++++++++ |++++++++|||+.+|+.+.+.+|+..+.+..+
T Consensus 132 ~~~~~~Kp~p~~~~~~~~~~---~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g 184 (214)
T PRK13288 132 DDVEHAKPDPEPVLKALELL---GAKPEEALMVGDNHHDILAGKNAGTKTAGVAWT 184 (214)
T ss_pred CcCCCCCCCcHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCC
Confidence 34456678999999999999 999999999999999999999999888877654
No 54
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=98.91 E-value=8.7e-10 Score=106.15 Aligned_cols=52 Identities=29% Similarity=0.372 Sum_probs=46.7
Q ss_pred EecCCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEecCC
Q 014608 169 ILPQGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMVSNA 223 (421)
Q Consensus 169 I~p~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav~NA 223 (421)
..+.+.+++..+..+++++ |++++++++|||+.||+++.+.+|+.+++|.++
T Consensus 152 ~~~~~Kp~p~~~~~~~~~~---g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G 203 (272)
T PRK13223 152 TLPQKKPDPAALLFVMKMA---GVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYG 203 (272)
T ss_pred CCCCCCCCcHHHHHHHHHh---CCChhHEEEECCCHHHHHHHHHCCCeEEEEecC
Confidence 3566788899999999999 999999999999999999999999878888664
No 55
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=98.88 E-value=1.9e-09 Score=100.40 Aligned_cols=90 Identities=13% Similarity=0.111 Sum_probs=59.8
Q ss_pred CCCceEEEEEEcccchHHHHHHHHHHHHhcCCcEEEEEEcCeeEEEecCCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCC
Q 014608 124 EQRPHKVSFYVDKDKAQTVTQKLSEIFKNRGLDVKIIYSGGMDLDILPQGAGKGQALAYLLRKFKCEGKVPTNTLVCGDS 203 (421)
Q Consensus 124 ~~~~~ki~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~s~~~~ldI~p~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs 203 (421)
..+.+++.+..... ....+.+.+.+.- ..-+..+.++ +..+.+.+++..++.+++++ |+++++|++|||+
T Consensus 105 ~~~g~~~~i~S~~~--~~~~~~~l~~~~l-~~~f~~~~~~----~~~~~~Kp~~~~~~~~~~~~---~~~~~~~~~igDs 174 (222)
T PRK10826 105 KAQGLKIGLASASP--LHMLEAVLTMFDL-RDYFDALASA----EKLPYSKPHPEVYLNCAAKL---GVDPLTCVALEDS 174 (222)
T ss_pred HHCCCeEEEEeCCc--HHHHHHHHHhCcc-hhcccEEEEc----ccCCCCCCCHHHHHHHHHHc---CCCHHHeEEEcCC
Confidence 34456777766532 2223333333220 0113333332 33455667889999999999 9999999999999
Q ss_pred cCchhhhcCCCceEEEecCC
Q 014608 204 GNDAELFSIPEVYGVMVSNA 223 (421)
Q Consensus 204 ~NDi~M~~~agv~gvav~NA 223 (421)
.||+++.+.+|+..|.+...
T Consensus 175 ~~Di~aA~~aG~~~i~v~~~ 194 (222)
T PRK10826 175 FNGMIAAKAARMRSIVVPAP 194 (222)
T ss_pred hhhHHHHHHcCCEEEEecCC
Confidence 99999999999777777544
No 56
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=98.84 E-value=3.8e-08 Score=89.77 Aligned_cols=53 Identities=25% Similarity=0.376 Sum_probs=46.0
Q ss_pred CCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEecCChHHHHHHH
Q 014608 174 AGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMVSNAQEELLQWH 231 (421)
Q Consensus 174 ~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav~NA~~elk~~a 231 (421)
.+|+.+++.+++++ |+++++++++|||.||++|++.+| .++++ |+.+.++..|
T Consensus 146 ~~k~~~~~~~~~~~---~~~~~~~i~iGDs~~D~~~a~~ag-~~~a~-~~~~~~~~~a 198 (201)
T TIGR01491 146 DNKGEAVERLKREL---NPSLTETVAVGDSKNDLPMFEVAD-ISISL-GDEGHADYLA 198 (201)
T ss_pred ccHHHHHHHHHHHh---CCCHHHEEEEcCCHhHHHHHHhcC-CeEEE-CCCccchhhc
Confidence 46899999999999 999999999999999999999999 78886 5555666554
No 57
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=98.79 E-value=3.8e-09 Score=99.02 Aligned_cols=50 Identities=16% Similarity=0.145 Sum_probs=44.3
Q ss_pred cCCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEecCC
Q 014608 171 PQGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMVSNA 223 (421)
Q Consensus 171 p~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav~NA 223 (421)
....+++..+.++++++ |++++++++|||+.||+.+.+.+|+..|++..+
T Consensus 148 ~~~KP~p~~~~~~~~~l---~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g 197 (229)
T PRK13226 148 AERKPHPLPLLVAAERI---GVAPTDCVYVGDDERDILAARAAGMPSVAALWG 197 (229)
T ss_pred CCCCCCHHHHHHHHHHh---CCChhhEEEeCCCHHHHHHHHHCCCcEEEEeec
Confidence 45667889999999999 999999999999999999999999877877544
No 58
>PRK10444 UMP phosphatase; Provisional
Probab=98.77 E-value=9.9e-08 Score=90.55 Aligned_cols=50 Identities=16% Similarity=0.096 Sum_probs=44.4
Q ss_pred CCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCc-CchhhhcCCCceEEEecCCh
Q 014608 172 QGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSG-NDAELFSIPEVYGVMVSNAQ 224 (421)
Q Consensus 172 ~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~-NDi~M~~~agv~gvav~NA~ 224 (421)
.+.++...+..+++++ +++++++++|||+. +|+.+.+.+|+.++.|....
T Consensus 172 ~gKP~~~~~~~~~~~~---~~~~~~~v~IGD~~~tDi~~A~~~G~~~vlV~~G~ 222 (248)
T PRK10444 172 VGKPSPWIIRAALNKM---QAHSEETVIVGDNLRTDILAGFQAGLETILVLSGV 222 (248)
T ss_pred cCCCCHHHHHHHHHHc---CCCcccEEEECCCcHHHHHHHHHcCCCEEEECCCC
Confidence 4667888999999999 99999999999996 89999999999999886553
No 59
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=98.77 E-value=1.4e-07 Score=100.83 Aligned_cols=192 Identities=17% Similarity=0.262 Sum_probs=123.2
Q ss_pred ccccCCCeEEEEeCCCCCCCCCCCCCccHHHHHHHHHHHHcCCcEEEEEcCCCHHHHHHHHHhCCCCCCCEEEEccCcEE
Q 014608 3 RLSAAARLMIVSDLDHTMVDHHDAENLSLLRFNALWEAHYRRDSLLVFSTGRSPTLYKQLRKEKPMLTPDITIMSVGTEI 82 (421)
Q Consensus 3 rl~~~~~klI~~DLDGTLl~~~~~~~~s~~~~~al~~~l~~~g~~vviaTGRs~~~~~~l~~~~~~~~~d~~I~~nGa~I 82 (421)
.++.+++++|++|+|||++...... ....|...+.+++..+.|++||+...+..... +. .--+++++||+.+
T Consensus 497 ~y~~s~~rli~ldyd~t~~~~~~~~-----~~~~l~~L~~dp~n~v~i~s~~~r~~l~~~~~--~~-~~lgl~aEhG~f~ 568 (732)
T KOG1050|consen 497 DYKKSKKRLILLDYDLTLIPPRSIK-----AISILKDLCSDPKNIVYIVSGRGRSVLEKWFF--GC-KNLGLAAEHGYFV 568 (732)
T ss_pred hhhhccceEEEecccccccCCCCch-----HHHHHHHHhcCCCCeEEEEEccCchhhhhhcc--cc-ccceeecccCcee
Confidence 3566789999999999999887543 23344445578889999999999766544332 11 1125788999999
Q ss_pred EeCCccCCcccHHHHH-hchhhhhHHHHHhhcCCCCcccCCcCCCceEEEEEEccc---chHHHHHHHHHHHHhcCCcEE
Q 014608 83 TYGDAMVPDNGWVEVL-NQKWDKKIVTEEASRFPELKLQSETEQRPHKVSFYVDKD---KAQTVTQKLSEIFKNRGLDVK 158 (421)
Q Consensus 83 ~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ki~~~~~~~---~~~~~~~~l~~~l~~~~~~~~ 158 (421)
..++. |.... +-.|. +.+.....+|.+-++....+.+..-+.++.... ...-...++.+.+......+.
T Consensus 569 r~~~~------w~~~~~~~~w~-~~v~~i~~~~~ert~GS~ie~k~~~l~~hy~~ad~~~g~~qA~el~~~l~~~~~~~~ 641 (732)
T KOG1050|consen 569 RIPGK------WETCVLDLDWK-DLVKDIFQYYTERTPGSYIERKETALVWHYRNADPEFGELQAKELLEHLESKNEPVE 641 (732)
T ss_pred ccCCc------eeeecccccHH-HHHHHHHHHHHhcCCCceecccCceEEEeeeccCcchhHHHHHHHHHHhcccCCCeE
Confidence 87654 22111 22232 112222233333332233344444455544322 223334555555544223444
Q ss_pred EEEEcCeeEEEecCCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCC
Q 014608 159 IIYSGGMDLDILPQGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIP 213 (421)
Q Consensus 159 v~~s~~~~ldI~p~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~a 213 (421)
+..|...+++-|.|+|||.+...++..+ .-+++.++++||...|..||...
T Consensus 642 -v~~g~~~Vev~~~gvsk~~~~~~~~~~~---~~~~df~~c~g~d~tDed~~~~~ 692 (732)
T KOG1050|consen 642 -VVRGKHIVEVRPQGVSKGLAAERILSEM---VKEPDFVLCIGDDRTDEDMFEFI 692 (732)
T ss_pred -EEecCceEEEcccccchHHHHHHHHHhc---CCCcceEEEecCCCChHHHHHHH
Confidence 4577899999999999999999999999 66679999999999999999854
No 60
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=98.76 E-value=1.5e-08 Score=91.57 Aligned_cols=48 Identities=15% Similarity=0.095 Sum_probs=43.0
Q ss_pred cCCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEec
Q 014608 171 PQGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMVS 221 (421)
Q Consensus 171 p~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav~ 221 (421)
....++...+.++++++ |++++++++|||+.+|++..+.+|+..|++.
T Consensus 139 ~~~KP~p~~~~~~~~~~---~~~~~~~l~igDs~~di~aA~~aG~~~i~~~ 186 (188)
T PRK10725 139 QHHKPAPDTFLRCAQLM---GVQPTQCVVFEDADFGIQAARAAGMDAVDVR 186 (188)
T ss_pred cCCCCChHHHHHHHHHc---CCCHHHeEEEeccHhhHHHHHHCCCEEEeec
Confidence 34567889999999999 9999999999999999999999998777764
No 61
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=98.75 E-value=1.4e-07 Score=91.11 Aligned_cols=48 Identities=21% Similarity=0.235 Sum_probs=41.7
Q ss_pred CCCHHHHHHHHHHHHhhCCCCCCcEEEEcCC-cCchhhhcCCCceEEEecCC
Q 014608 173 GAGKGQALAYLLRKFKCEGKVPTNTLVCGDS-GNDAELFSIPEVYGVMVSNA 223 (421)
Q Consensus 173 g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs-~NDi~M~~~agv~gvav~NA 223 (421)
+.+....+..+++++ |++++++++|||+ ..|+.+.+.+|+.++.|...
T Consensus 201 gKP~p~~~~~~~~~~---~~~~~~~lmIGD~~~tDI~~A~~aGi~si~V~~G 249 (279)
T TIGR01452 201 GKPSPYMFECITENF---SIDPARTLMVGDRLETDILFGHRCGMTTVLVLSG 249 (279)
T ss_pred CCCCHHHHHHHHHHh---CCChhhEEEECCChHHHHHHHHHcCCcEEEECCC
Confidence 445566788999999 9999999999999 69999999999888988655
No 62
>PRK11590 hypothetical protein; Provisional
Probab=98.73 E-value=2e-07 Score=86.30 Aligned_cols=51 Identities=25% Similarity=0.131 Sum_probs=38.8
Q ss_pred CCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEecCChHHHHH
Q 014608 174 AGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMVSNAQEELLQ 229 (421)
Q Consensus 174 ~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav~NA~~elk~ 229 (421)
+....=++.|.+.+ |.+...+.+.|||.||++||+.++ ++++| |..+.+++
T Consensus 159 c~g~~K~~~l~~~~---~~~~~~~~aY~Ds~~D~pmL~~a~-~~~~v-np~~~l~~ 209 (211)
T PRK11590 159 CLGHEKVAQLERKI---GTPLRLYSGYSDSKQDNPLLYFCQ-HRWRV-TPRGELQQ 209 (211)
T ss_pred CCChHHHHHHHHHh---CCCcceEEEecCCcccHHHHHhCC-CCEEE-CccHHhhc
Confidence 33333344555556 667788899999999999999999 99997 77777765
No 63
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=98.73 E-value=6.8e-09 Score=96.60 Aligned_cols=49 Identities=24% Similarity=0.232 Sum_probs=43.9
Q ss_pred CCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEecCC
Q 014608 172 QGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMVSNA 223 (421)
Q Consensus 172 ~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav~NA 223 (421)
...+|+.+++.+++++ +++++++++|||+.||+++++.+|+.++.|...
T Consensus 147 ~~kp~~~~~~~~~~~~---~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g 195 (226)
T PRK13222 147 NKKPDPAPLLLACEKL---GLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYG 195 (226)
T ss_pred CCCcChHHHHHHHHHc---CCChhheEEECCCHHHHHHHHHCCCcEEEECcC
Confidence 4556789999999999 999999999999999999999999878888654
No 64
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=98.72 E-value=6e-08 Score=92.59 Aligned_cols=48 Identities=21% Similarity=0.224 Sum_probs=43.0
Q ss_pred CCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCc-CchhhhcCCCceEEEecCC
Q 014608 173 GAGKGQALAYLLRKFKCEGKVPTNTLVCGDSG-NDAELFSIPEVYGVMVSNA 223 (421)
Q Consensus 173 g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~-NDi~M~~~agv~gvav~NA 223 (421)
+.++...++.+++++ |++++++++|||+. +|+.+.+.+|+.++.|..+
T Consensus 178 gKP~p~~~~~~~~~~---~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~~G 226 (257)
T TIGR01458 178 GKPSKTFFLEALRAT---GCEPEEAVMIGDDCRDDVGGAQDCGMRGIQVRTG 226 (257)
T ss_pred cCCCHHHHHHHHHHh---CCChhhEEEECCCcHHHHHHHHHcCCeEEEECCC
Confidence 566788899999999 99999999999995 9999999999989998654
No 65
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=98.71 E-value=1.1e-07 Score=90.47 Aligned_cols=91 Identities=13% Similarity=0.039 Sum_probs=60.8
Q ss_pred CCCceEEEEEEcccchHHHHHHHHHHHHhcCCcEEEEEEcCeeEEEecCCCCHHHHHHHHHHHHhhCCCC-CCcEEEEcC
Q 014608 124 EQRPHKVSFYVDKDKAQTVTQKLSEIFKNRGLDVKIIYSGGMDLDILPQGAGKGQALAYLLRKFKCEGKV-PTNTLVCGD 202 (421)
Q Consensus 124 ~~~~~ki~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~s~~~~ldI~p~g~sKg~al~~L~~~l~~~gi~-~~~vl~~GD 202 (421)
..+.+++.+.+.. .....+.+.+.+.-.+.-+..+.++ +-++.+.++...+...++++ |++ ++++++|||
T Consensus 112 ~~~g~~l~IvT~~--~~~~~~~~l~~~gl~~~f~d~ii~~----~~~~~~KP~p~~~~~a~~~l---~~~~~~~~l~IGD 182 (253)
T TIGR01422 112 RARGIKIGSTTGY--TREMMDVVAPEAALQGYRPDYNVTT----DDVPAGRPAPWMALKNAIEL---GVYDVAACVKVGD 182 (253)
T ss_pred HHCCCeEEEECCC--cHHHHHHHHHHHHhcCCCCceEEcc----ccCCCCCCCHHHHHHHHHHc---CCCCchheEEECC
Confidence 3445666665542 2334444444443211111233332 22345567889999999999 985 999999999
Q ss_pred CcCchhhhcCCCceEEEecCC
Q 014608 203 SGNDAELFSIPEVYGVMVSNA 223 (421)
Q Consensus 203 s~NDi~M~~~agv~gvav~NA 223 (421)
|.+|+.+.+.+|+..|+|..+
T Consensus 183 s~~Di~aA~~aGi~~i~v~~g 203 (253)
T TIGR01422 183 TVPDIEEGRNAGMWTVGLILS 203 (253)
T ss_pred cHHHHHHHHHCCCeEEEEecC
Confidence 999999999999988988764
No 66
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=98.70 E-value=3.2e-08 Score=94.01 Aligned_cols=87 Identities=14% Similarity=0.095 Sum_probs=59.6
Q ss_pred CCCceEEEEEEcccchHHHHHHHHHHHHhcCCc--EEEEEEcCeeEEEecCCCCHHHHHHHHHHHHhhCCCCCCcEEEEc
Q 014608 124 EQRPHKVSFYVDKDKAQTVTQKLSEIFKNRGLD--VKIIYSGGMDLDILPQGAGKGQALAYLLRKFKCEGKVPTNTLVCG 201 (421)
Q Consensus 124 ~~~~~ki~~~~~~~~~~~~~~~l~~~l~~~~~~--~~v~~s~~~~ldI~p~g~sKg~al~~L~~~l~~~gi~~~~vl~~G 201 (421)
....+++.+.++.. ....+.+.+.+ +.. +..+.++. -.+.+.+++..+...++++ |++++++++||
T Consensus 121 ~~~g~~l~I~Tn~~--~~~~~~~l~~~---gl~~~Fd~iv~~~----~~~~~KP~p~~~~~a~~~~---~~~~~~~l~vg 188 (248)
T PLN02770 121 EDRGLKRAAVTNAP--RENAELMISLL---GLSDFFQAVIIGS----ECEHAKPHPDPYLKALEVL---KVSKDHTFVFE 188 (248)
T ss_pred HHcCCeEEEEeCCC--HHHHHHHHHHc---CChhhCcEEEecC----cCCCCCCChHHHHHHHHHh---CCChhHEEEEc
Confidence 34456777776532 22233333333 211 33333332 2344567889999999999 99999999999
Q ss_pred CCcCchhhhcCCCceEEEecC
Q 014608 202 DSGNDAELFSIPEVYGVMVSN 222 (421)
Q Consensus 202 Ds~NDi~M~~~agv~gvav~N 222 (421)
|+.+|+.+.+.+|+..+.+.+
T Consensus 189 Ds~~Di~aA~~aGi~~i~v~~ 209 (248)
T PLN02770 189 DSVSGIKAGVAAGMPVVGLTT 209 (248)
T ss_pred CCHHHHHHHHHCCCEEEEEeC
Confidence 999999999999988888864
No 67
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=98.69 E-value=2.4e-08 Score=91.93 Aligned_cols=55 Identities=22% Similarity=0.303 Sum_probs=45.3
Q ss_pred CCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEecCChHHHHHHHHhhc
Q 014608 172 QGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMVSNAQEELLQWHAANA 235 (421)
Q Consensus 172 ~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav~NA~~elk~~a~~v~ 235 (421)
.+-.|...++.+ +.. |. +++++|||.||++|++.+| .++++ +|.|.+++.|+...
T Consensus 129 ~~~~K~~~l~~l-~~~---~~---~~v~vGDs~nDl~ml~~Ag-~~ia~-~ak~~~~~~~~~~~ 183 (203)
T TIGR02137 129 QKDPKRQSVIAF-KSL---YY---RVIAAGDSYNDTTMLSEAH-AGILF-HAPENVIREFPQFP 183 (203)
T ss_pred CcchHHHHHHHH-Hhh---CC---CEEEEeCCHHHHHHHHhCC-CCEEe-cCCHHHHHhCCCCC
Confidence 345788888887 455 53 8999999999999999999 89987 88999998876543
No 68
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=98.69 E-value=1.5e-07 Score=90.69 Aligned_cols=46 Identities=26% Similarity=0.307 Sum_probs=42.0
Q ss_pred CHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEecCC
Q 014608 175 GKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMVSNA 223 (421)
Q Consensus 175 sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav~NA 223 (421)
+|..++..+++++ +++++++++|||+.+|+.+.+.+|+.+|.+...
T Consensus 196 ~k~~~~~~~l~~~---~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g 241 (273)
T PRK13225 196 SKRRALSQLVARE---GWQPAAVMYVGDETRDVEAARQVGLIAVAVTWG 241 (273)
T ss_pred CCHHHHHHHHHHh---CcChhHEEEECCCHHHHHHHHHCCCeEEEEecC
Confidence 4789999999999 999999999999999999999999888877654
No 69
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=98.68 E-value=1.6e-07 Score=90.18 Aligned_cols=91 Identities=11% Similarity=0.012 Sum_probs=59.4
Q ss_pred CCCceEEEEEEcccchHHHHHHHHHHHHhcCCcEEEEEEcCeeEEEecCCCCHHHHHHHHHHHHhhCCCC-CCcEEEEcC
Q 014608 124 EQRPHKVSFYVDKDKAQTVTQKLSEIFKNRGLDVKIIYSGGMDLDILPQGAGKGQALAYLLRKFKCEGKV-PTNTLVCGD 202 (421)
Q Consensus 124 ~~~~~ki~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~s~~~~ldI~p~g~sKg~al~~L~~~l~~~gi~-~~~vl~~GD 202 (421)
..+.+++.+.+.. .......+.+.+.-.+..+..+.++. -.....+++..+..+++++ |++ ++++++|||
T Consensus 114 ~~~g~~l~I~T~~--~~~~~~~~l~~~~l~~~~~d~i~~~~----~~~~~KP~p~~~~~a~~~l---~~~~~~e~l~IGD 184 (267)
T PRK13478 114 RARGIKIGSTTGY--TREMMDVVVPLAAAQGYRPDHVVTTD----DVPAGRPYPWMALKNAIEL---GVYDVAACVKVDD 184 (267)
T ss_pred HHCCCEEEEEcCC--cHHHHHHHHHHHhhcCCCceEEEcCC----cCCCCCCChHHHHHHHHHc---CCCCCcceEEEcC
Confidence 3445677766543 23333444443322111122333322 2334456788999999999 986 699999999
Q ss_pred CcCchhhhcCCCceEEEecCC
Q 014608 203 SGNDAELFSIPEVYGVMVSNA 223 (421)
Q Consensus 203 s~NDi~M~~~agv~gvav~NA 223 (421)
+.+|+.+.+.+|+..|+|..+
T Consensus 185 s~~Di~aA~~aG~~~i~v~~g 205 (267)
T PRK13478 185 TVPGIEEGLNAGMWTVGVILS 205 (267)
T ss_pred cHHHHHHHHHCCCEEEEEccC
Confidence 999999999999888888765
No 70
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=98.66 E-value=2.6e-07 Score=78.75 Aligned_cols=44 Identities=18% Similarity=0.212 Sum_probs=39.4
Q ss_pred CCHHHHHHHHHHHHhhCC-CCCCcEEEEcC-CcCchhhhcCCCceEEEe
Q 014608 174 AGKGQALAYLLRKFKCEG-KVPTNTLVCGD-SGNDAELFSIPEVYGVMV 220 (421)
Q Consensus 174 ~sKg~al~~L~~~l~~~g-i~~~~vl~~GD-s~NDi~M~~~agv~gvav 220 (421)
.+|+.+++++++++ + ++++++++||| +.+|+.+.+.+|+.+|.+
T Consensus 85 KP~~~~~~~~~~~~---~~~~~~~~v~IGD~~~~Di~~A~~~Gi~~i~~ 130 (132)
T TIGR01662 85 KPKPGMFLEALKRF---NEIDPEESVYVGDQDLTDLQAAKRAGLAFILV 130 (132)
T ss_pred CCChHHHHHHHHHc---CCCChhheEEEcCCCcccHHHHHHCCCeEEEe
Confidence 45889999999999 7 99999999999 799999999999777665
No 71
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=98.66 E-value=1.8e-08 Score=100.51 Aligned_cols=91 Identities=11% Similarity=0.101 Sum_probs=62.1
Q ss_pred CCCceEEEEEEcccchHHHHHHHHHHHHhcCCcEEEEEEcCeeEEEecCCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCC
Q 014608 124 EQRPHKVSFYVDKDKAQTVTQKLSEIFKNRGLDVKIIYSGGMDLDILPQGAGKGQALAYLLRKFKCEGKVPTNTLVCGDS 203 (421)
Q Consensus 124 ~~~~~ki~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~s~~~~ldI~p~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs 203 (421)
....+++.+..... ...++.+.+.+. ...-+..+.++. -...+..+...+.+.++++ |+++++|++|||+
T Consensus 229 k~~GiklaIaSn~~--~~~~~~~L~~lg-L~~yFd~Iv~sd----dv~~~KP~Peifl~A~~~l---gl~Peecl~IGDS 298 (381)
T PLN02575 229 MNYKIPMALVSTRP--RKTLENAIGSIG-IRGFFSVIVAAE----DVYRGKPDPEMFIYAAQLL---NFIPERCIVFGNS 298 (381)
T ss_pred HHCCCeEEEEeCCC--HHHHHHHHHHcC-CHHHceEEEecC----cCCCCCCCHHHHHHHHHHc---CCCcccEEEEcCC
Confidence 34456777766532 333333333332 001234444432 2234567889999999999 9999999999999
Q ss_pred cCchhhhcCCCceEEEecCCh
Q 014608 204 GNDAELFSIPEVYGVMVSNAQ 224 (421)
Q Consensus 204 ~NDi~M~~~agv~gvav~NA~ 224 (421)
.+|+.+.+.+|+..|++.+..
T Consensus 299 ~~DIeAAk~AGm~~IgV~~~~ 319 (381)
T PLN02575 299 NQTVEAAHDARMKCVAVASKH 319 (381)
T ss_pred HHHHHHHHHcCCEEEEECCCC
Confidence 999999999999889987754
No 72
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=98.66 E-value=1.8e-08 Score=96.37 Aligned_cols=89 Identities=12% Similarity=0.154 Sum_probs=59.4
Q ss_pred CCceEEEEEEcccchHHHHHHHHHHHHhcCCcEEEEEEcCeeEEEecCCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCc
Q 014608 125 QRPHKVSFYVDKDKAQTVTQKLSEIFKNRGLDVKIIYSGGMDLDILPQGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSG 204 (421)
Q Consensus 125 ~~~~ki~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~s~~~~ldI~p~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~ 204 (421)
...+++.+.++.. ......+.+.+. ...-+..+.++. -...+.++...+..+++++ |+++++|++||||.
T Consensus 123 ~~g~~l~I~Tn~~--~~~~~~~l~~~g-l~~~Fd~ii~~~----d~~~~KP~Pe~~~~a~~~l---~~~p~~~l~IgDs~ 192 (260)
T PLN03243 123 KHEIPIAVASTRP--RRYLERAIEAVG-MEGFFSVVLAAE----DVYRGKPDPEMFMYAAERL---GFIPERCIVFGNSN 192 (260)
T ss_pred HCCCEEEEEeCcC--HHHHHHHHHHcC-CHhhCcEEEecc----cCCCCCCCHHHHHHHHHHh---CCChHHeEEEcCCH
Confidence 3456777766532 223333333321 001133333432 2234566889999999999 99999999999999
Q ss_pred CchhhhcCCCceEEEecCC
Q 014608 205 NDAELFSIPEVYGVMVSNA 223 (421)
Q Consensus 205 NDi~M~~~agv~gvav~NA 223 (421)
+|+.+.+.+|+..|++.+.
T Consensus 193 ~Di~aA~~aG~~~i~v~g~ 211 (260)
T PLN03243 193 SSVEAAHDGCMKCVAVAGK 211 (260)
T ss_pred HHHHHHHHcCCEEEEEecC
Confidence 9999999999888888643
No 73
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=98.64 E-value=1.5e-08 Score=93.38 Aligned_cols=48 Identities=19% Similarity=0.257 Sum_probs=43.3
Q ss_pred cCCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEec
Q 014608 171 PQGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMVS 221 (421)
Q Consensus 171 p~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav~ 221 (421)
.....+..++..+++++ |++++++++|||+.+|+.+.+.+|+..+.+.
T Consensus 138 ~~~Kp~p~~~~~~~~~~---~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~ 185 (213)
T TIGR01449 138 AQRKPHPDPLLLAAERL---GVAPQQMVYVGDSRVDIQAARAAGCPSVLLT 185 (213)
T ss_pred CCCCCChHHHHHHHHHc---CCChhHeEEeCCCHHHHHHHHHCCCeEEEEc
Confidence 44566889999999999 9999999999999999999999998888774
No 74
>PRK11587 putative phosphatase; Provisional
Probab=98.63 E-value=6.6e-08 Score=89.87 Aligned_cols=50 Identities=14% Similarity=0.084 Sum_probs=44.8
Q ss_pred CCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEecCCh
Q 014608 172 QGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMVSNAQ 224 (421)
Q Consensus 172 ~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav~NA~ 224 (421)
...+++..+...++++ |++|+++++||||.+|+.+.+.+|+.++++.+..
T Consensus 136 ~~KP~p~~~~~~~~~~---g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~ 185 (218)
T PRK11587 136 RGKPEPDAYLLGAQLL---GLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPA 185 (218)
T ss_pred CCCCCcHHHHHHHHHc---CCCcccEEEEecchhhhHHHHHCCCEEEEECCCC
Confidence 3456788999999999 9999999999999999999999998889997754
No 75
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=98.62 E-value=7.4e-08 Score=84.98 Aligned_cols=71 Identities=10% Similarity=0.054 Sum_probs=49.3
Q ss_pred EEEEeCCCCCCCCCC---------CCCccHHHHHHHHHHHHcCCcEEEEEcCCCHHHHH---HHHHh-----CCCCCCCE
Q 014608 11 MIVSDLDHTMVDHHD---------AENLSLLRFNALWEAHYRRDSLLVFSTGRSPTLYK---QLRKE-----KPMLTPDI 73 (421)
Q Consensus 11 lI~~DLDGTLl~~~~---------~~~~s~~~~~al~~~l~~~g~~vviaTGRs~~~~~---~l~~~-----~~~~~~d~ 73 (421)
+|+||+||||++++. ....+....+++. +++++|++++++|||+...+. .+... .+++ +..
T Consensus 1 iVisDIDGTL~~sd~~~~~~~~~~~~~~~~~~~~a~~-~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp-~g~ 78 (157)
T smart00775 1 IVISDIDGTITKSDVLGHVVPIIGKDWTHPGVAKLYR-DIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLP-HGP 78 (157)
T ss_pred CEEEecCCCCcccccccccccccccCcCCHHHHHHHH-HHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCC-Cce
Confidence 589999999999871 0123334444444 788999999999999998774 44444 2221 246
Q ss_pred EEEccCcEEE
Q 014608 74 TIMSVGTEIT 83 (421)
Q Consensus 74 ~I~~nGa~I~ 83 (421)
++++||+.+.
T Consensus 79 li~~~g~~~~ 88 (157)
T smart00775 79 VLLSPDRLFA 88 (157)
T ss_pred EEEcCCcchh
Confidence 8889998764
No 76
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=98.59 E-value=5.1e-07 Score=87.60 Aligned_cols=50 Identities=12% Similarity=0.145 Sum_probs=44.2
Q ss_pred cCCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEecCC
Q 014608 171 PQGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMVSNA 223 (421)
Q Consensus 171 p~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav~NA 223 (421)
....+++..+..+++++ |++++++++|||+.+|+++.+.+|+..|++.+.
T Consensus 199 ~~~KP~p~~~~~a~~~~---~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g 248 (286)
T PLN02779 199 PKKKPDPDIYNLAAETL---GVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSS 248 (286)
T ss_pred CCCCCCHHHHHHHHHHh---CcChHHEEEEeCCHHhHHHHHHcCCEEEEEccC
Confidence 44566788999999999 999999999999999999999999888887554
No 77
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=98.58 E-value=1.9e-07 Score=87.23 Aligned_cols=54 Identities=13% Similarity=0.014 Sum_probs=44.8
Q ss_pred ecCCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCce-EEEecCChHH
Q 014608 170 LPQGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVY-GVMVSNAQEE 226 (421)
Q Consensus 170 ~p~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~-gvav~NA~~e 226 (421)
......+......+++++ |+++++|++|||+.+|+...+.+|+. .++|.+....
T Consensus 145 ~~~~KP~p~~~~~~~~~~---~~~p~~~l~igDs~~di~aA~~aG~~~~~~v~~~~~~ 199 (224)
T PRK14988 145 FGYPKEDQRLWQAVAEHT---GLKAERTLFIDDSEPILDAAAQFGIRYCLGVTNPDSG 199 (224)
T ss_pred CCCCCCCHHHHHHHHHHc---CCChHHEEEEcCCHHHHHHHHHcCCeEEEEEeCCCCC
Confidence 344566788999999999 99999999999999999999999964 3667775443
No 78
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=98.57 E-value=1.3e-07 Score=84.44 Aligned_cols=41 Identities=29% Similarity=0.430 Sum_probs=37.4
Q ss_pred ecCCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCC
Q 014608 170 LPQGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIP 213 (421)
Q Consensus 170 ~p~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~a 213 (421)
.+.+.+|+.+++.+++.+ |++++++++||||.||++|++.+
T Consensus 137 ~~~~~~K~~~l~~~~~~~---~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 137 NPEGECKGKVLKELLEES---KITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred cCCcchHHHHHHHHHHHh---CCCHHHEEEEeCCHHHHHHHhcC
Confidence 466789999999999999 99999999999999999999864
No 79
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=98.57 E-value=7e-08 Score=88.71 Aligned_cols=49 Identities=14% Similarity=0.095 Sum_probs=43.1
Q ss_pred CCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEecCC
Q 014608 172 QGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMVSNA 223 (421)
Q Consensus 172 ~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav~NA 223 (421)
...+|...++.+++++ |++++++++|||+.+|+.+.+.+|+..+.+...
T Consensus 129 ~~KP~~~~~~~~~~~~---~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g 177 (205)
T TIGR01454 129 RPKPAPDIVREALRLL---DVPPEDAVMVGDAVTDLASARAAGTATVAALWG 177 (205)
T ss_pred CCCCChHHHHHHHHHc---CCChhheEEEcCCHHHHHHHHHcCCeEEEEEec
Confidence 4566889999999999 999999999999999999999999777776533
No 80
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=98.57 E-value=1.5e-07 Score=87.43 Aligned_cols=48 Identities=21% Similarity=0.096 Sum_probs=42.0
Q ss_pred CCCCHHHHHHHHHHHHhhCCCC-CCcEEEEcCCcCchhhhcCCCceE-EEecC
Q 014608 172 QGAGKGQALAYLLRKFKCEGKV-PTNTLVCGDSGNDAELFSIPEVYG-VMVSN 222 (421)
Q Consensus 172 ~g~sKg~al~~L~~~l~~~gi~-~~~vl~~GDs~NDi~M~~~agv~g-vav~N 222 (421)
.+.+++..+..+++++ |++ ++++++|||+.+|+.+.+.+|+.. +++..
T Consensus 143 ~~KP~p~~~~~a~~~~---~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~ 192 (220)
T TIGR03351 143 AGRPAPDLILRAMELT---GVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLT 192 (220)
T ss_pred CCCCCHHHHHHHHHHc---CCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEec
Confidence 4567889999999999 997 799999999999999999999766 66654
No 81
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=98.55 E-value=9.1e-08 Score=87.77 Aligned_cols=44 Identities=14% Similarity=0.305 Sum_probs=32.7
Q ss_pred HHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEecCChHHHH
Q 014608 180 LAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMVSNAQEELL 228 (421)
Q Consensus 180 l~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav~NA~~elk 228 (421)
...+++.+ +..++++++||||.||++|++.+| .++++.. .+.++
T Consensus 133 k~~~l~~~---~~~~~~~v~iGDs~~D~~~~~aa~-~~v~~~~-~~~~~ 176 (205)
T PRK13582 133 KRQAVKAL---KSLGYRVIAAGDSYNDTTMLGEAD-AGILFRP-PANVI 176 (205)
T ss_pred HHHHHHHH---HHhCCeEEEEeCCHHHHHHHHhCC-CCEEECC-CHHHH
Confidence 34444555 445689999999999999999999 6887655 44443
No 82
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=98.54 E-value=1.2e-07 Score=87.88 Aligned_cols=50 Identities=14% Similarity=0.178 Sum_probs=43.7
Q ss_pred CCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCc-CchhhhcCCCceEEEecCCh
Q 014608 172 QGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSG-NDAELFSIPEVYGVMVSNAQ 224 (421)
Q Consensus 172 ~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~-NDi~M~~~agv~gvav~NA~ 224 (421)
...++......+++++ |++++++++||||. +|+.+.+.+|+.+|.+....
T Consensus 148 ~~KP~~~~~~~~~~~~---~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~~~~ 198 (221)
T TIGR02253 148 VEKPHPKIFYAALKRL---GVKPEEAVMVGDRLDKDIKGAKNLGMKTVWINQGK 198 (221)
T ss_pred CCCCCHHHHHHHHHHc---CCChhhEEEECCChHHHHHHHHHCCCEEEEECCCC
Confidence 3456788999999999 99999999999997 99999999998888876543
No 83
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=98.53 E-value=3.7e-07 Score=79.59 Aligned_cols=46 Identities=20% Similarity=0.225 Sum_probs=41.5
Q ss_pred CCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEec
Q 014608 173 GAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMVS 221 (421)
Q Consensus 173 g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav~ 221 (421)
..+|...++++++.+ |++++++++|||+..|+++.+.+|+.+|.+.
T Consensus 100 ~KP~~~~~~~~~~~~---~~~~~e~i~IGDs~~Di~~A~~~Gi~~v~i~ 145 (147)
T TIGR01656 100 RKPKPGLILEALKRL---GVDASRSLVVGDRLRDLQAARNAGLAAVLLV 145 (147)
T ss_pred CCCCHHHHHHHHHHc---CCChHHEEEEcCCHHHHHHHHHCCCCEEEec
Confidence 356899999999999 9999999999999999999999998777664
No 84
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=98.52 E-value=8.9e-08 Score=86.18 Aligned_cols=47 Identities=15% Similarity=0.236 Sum_probs=40.6
Q ss_pred cCCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEe
Q 014608 171 PQGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMV 220 (421)
Q Consensus 171 p~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav 220 (421)
+...++...+.++++++ |++++++++|||+.+|+++.+.+|+..++|
T Consensus 139 ~~~kp~~~~~~~~~~~~---~~~~~~~v~IgD~~~di~aA~~~G~~~i~v 185 (185)
T TIGR02009 139 KEGKPHPETFLLAAELL---GVSPNECVVFEDALAGVQAARAAGMFAVAV 185 (185)
T ss_pred CCCCCChHHHHHHHHHc---CCCHHHeEEEeCcHhhHHHHHHCCCeEeeC
Confidence 34556778899999999 999999999999999999999999766654
No 85
>PLN02645 phosphoglycolate phosphatase
Probab=98.52 E-value=5.1e-06 Score=81.60 Aligned_cols=49 Identities=20% Similarity=0.208 Sum_probs=42.7
Q ss_pred CCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCc-CchhhhcCCCceEEEecCCh
Q 014608 173 GAGKGQALAYLLRKFKCEGKVPTNTLVCGDSG-NDAELFSIPEVYGVMVSNAQ 224 (421)
Q Consensus 173 g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~-NDi~M~~~agv~gvav~NA~ 224 (421)
|.++...+..+++++ +++++++++|||+. +|+.+.+.+|+.++.|..+.
T Consensus 229 gKP~p~~~~~a~~~~---~~~~~~~~~VGD~~~~Di~~A~~aG~~~ilV~~G~ 278 (311)
T PLN02645 229 GKPSTFMMDYLANKF---GIEKSQICMVGDRLDTDILFGQNGGCKTLLVLSGV 278 (311)
T ss_pred CCChHHHHHHHHHHc---CCCcccEEEEcCCcHHHHHHHHHcCCCEEEEcCCC
Confidence 355677889999999 99999999999997 99999999998888886543
No 86
>PLN02954 phosphoserine phosphatase
Probab=98.48 E-value=7.7e-07 Score=82.83 Aligned_cols=38 Identities=24% Similarity=0.352 Sum_probs=33.1
Q ss_pred CCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCC
Q 014608 172 QGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPE 214 (421)
Q Consensus 172 ~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~ag 214 (421)
.+.+|+.+++.+++++ |. +++++||||.||+.|.+.++
T Consensus 152 ~~~~K~~~i~~~~~~~---~~--~~~i~iGDs~~Di~aa~~~~ 189 (224)
T PLN02954 152 RSGGKAEAVQHIKKKH---GY--KTMVMIGDGATDLEARKPGG 189 (224)
T ss_pred CCccHHHHHHHHHHHc---CC--CceEEEeCCHHHHHhhhcCC
Confidence 4567999999999988 64 68999999999999988855
No 87
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=98.47 E-value=4.8e-07 Score=81.41 Aligned_cols=48 Identities=15% Similarity=0.215 Sum_probs=42.9
Q ss_pred cCCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEec
Q 014608 171 PQGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMVS 221 (421)
Q Consensus 171 p~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav~ 221 (421)
....++...++..++++ +++++++++|||+.+|+.+.+.+|+..|+|+
T Consensus 138 ~~~kp~p~~~~~~~~~~---~~~~~~~v~vgD~~~di~aA~~aG~~~i~v~ 185 (185)
T TIGR01990 138 KKGKPDPEIFLAAAEGL---GVSPSECIGIEDAQAGIEAIKAAGMFAVGVG 185 (185)
T ss_pred CCCCCChHHHHHHHHHc---CCCHHHeEEEecCHHHHHHHHHcCCEEEecC
Confidence 34567899999999999 9999999999999999999999998777763
No 88
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=98.44 E-value=7e-07 Score=85.25 Aligned_cols=75 Identities=16% Similarity=0.118 Sum_probs=55.1
Q ss_pred CCeEEEEeCCCCCCCCCCCCCccHHHHHHHHHHHHcCCcEEEEEcCCCHHHHHHHHHhCCCCCCCEEEEccCcEE
Q 014608 8 ARLMIVSDLDHTMVDHHDAENLSLLRFNALWEAHYRRDSLLVFSTGRSPTLYKQLRKEKPMLTPDITIMSVGTEI 82 (421)
Q Consensus 8 ~~klI~~DLDGTLl~~~~~~~~s~~~~~al~~~l~~~g~~vviaTGRs~~~~~~l~~~~~~~~~d~~I~~nGa~I 82 (421)
..++|+|||||||+++..+..+.......++++|+++|+.++++|+++...+....+.+++...--+|+++|...
T Consensus 125 ~~kvIvFDLDgTLi~~~~~v~irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv~ 199 (301)
T TIGR01684 125 PPHVVVFDLDSTLITDEEPVRIRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHKA 199 (301)
T ss_pred cceEEEEecCCCCcCCCCccccCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCccc
Confidence 578999999999999976543332334445557999999999999888888888888888753212456666653
No 89
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=98.42 E-value=2.3e-06 Score=77.15 Aligned_cols=49 Identities=18% Similarity=0.126 Sum_probs=43.1
Q ss_pred CCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEecCC
Q 014608 172 QGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMVSNA 223 (421)
Q Consensus 172 ~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav~NA 223 (421)
....+...+..+++++ |++++++++|||+.+|+.+.+.+|+..+.+...
T Consensus 101 ~~KP~p~~~~~~~~~l---~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g 149 (181)
T PRK08942 101 CRKPKPGMLLSIAERL---NIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTG 149 (181)
T ss_pred CCCCCHHHHHHHHHHc---CCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCC
Confidence 3455788999999999 999999999999999999999999877777654
No 90
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=98.41 E-value=3e-06 Score=75.48 Aligned_cols=39 Identities=15% Similarity=0.194 Sum_probs=34.5
Q ss_pred CCHHHHHHHHHHHHhhCC--CCCCcEEEEcCCc--------CchhhhcCCCc
Q 014608 174 AGKGQALAYLLRKFKCEG--KVPTNTLVCGDSG--------NDAELFSIPEV 215 (421)
Q Consensus 174 ~sKg~al~~L~~~l~~~g--i~~~~vl~~GDs~--------NDi~M~~~agv 215 (421)
..+...+.++++++ | ++++++++|||+. +|+.+.+.+|+
T Consensus 108 KP~p~~~~~~~~~~---~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi 156 (166)
T TIGR01664 108 KPMTGMWEYLQSQY---NSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGL 156 (166)
T ss_pred CCccHHHHHHHHHc---CCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCC
Confidence 45678899999999 8 9999999999986 69999999984
No 91
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=98.40 E-value=2.2e-06 Score=72.90 Aligned_cols=34 Identities=21% Similarity=0.241 Sum_probs=30.4
Q ss_pred CHHHHHHHHHHHHhhCC--CCCCcEEEEcCCcCchhhhc
Q 014608 175 GKGQALAYLLRKFKCEG--KVPTNTLVCGDSGNDAELFS 211 (421)
Q Consensus 175 sKg~al~~L~~~l~~~g--i~~~~vl~~GDs~NDi~M~~ 211 (421)
+|+..+..+++++ | +++++|++|||+..|++-++
T Consensus 90 pkp~~~~~a~~~l---g~~~~p~~~l~igDs~~n~~~~~ 125 (128)
T TIGR01681 90 PKSPRLVEIALKL---NGVLKPKSILFVDDRPDNNEEVD 125 (128)
T ss_pred cHHHHHHHHHHHh---cCCCCcceEEEECCCHhHHHHHH
Confidence 4888999999999 9 99999999999999976554
No 92
>PLN02940 riboflavin kinase
Probab=98.39 E-value=1.1e-06 Score=88.77 Aligned_cols=51 Identities=16% Similarity=0.106 Sum_probs=45.4
Q ss_pred cCCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEecCCh
Q 014608 171 PQGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMVSNAQ 224 (421)
Q Consensus 171 p~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav~NA~ 224 (421)
....+++..+..+++++ |+++++|++|||+.+|+++.+.+|+..|++....
T Consensus 147 ~~~KP~p~~~~~a~~~l---gv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~ 197 (382)
T PLN02940 147 EKGKPSPDIFLEAAKRL---NVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPSIP 197 (382)
T ss_pred CCCCCCHHHHHHHHHHc---CCChhHEEEEeCCHHHHHHHHHcCCEEEEECCCC
Confidence 34566889999999999 9999999999999999999999998888887653
No 93
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=98.39 E-value=2.8e-06 Score=76.31 Aligned_cols=49 Identities=16% Similarity=0.078 Sum_probs=41.6
Q ss_pred CCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceE-EEecCC
Q 014608 172 QGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYG-VMVSNA 223 (421)
Q Consensus 172 ~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~g-vav~NA 223 (421)
.+.++...+...++++ |++++++++|||+.+|+++.+.+|+.. +.+...
T Consensus 104 ~~KP~p~~~~~a~~~~---~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g 153 (176)
T TIGR00213 104 CRKPKPGMLLQARKEL---HIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTG 153 (176)
T ss_pred CCCCCHHHHHHHHHHc---CcChhhEEEEcCCHHHHHHHHHCCCcEEEEEecC
Confidence 3456889999999999 999999999999999999999999655 455443
No 94
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=98.36 E-value=1.3e-06 Score=80.11 Aligned_cols=42 Identities=21% Similarity=0.144 Sum_probs=36.6
Q ss_pred CCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCc-CchhhhcCCCceE
Q 014608 173 GAGKGQALAYLLRKFKCEGKVPTNTLVCGDSG-NDAELFSIPEVYG 217 (421)
Q Consensus 173 g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~-NDi~M~~~agv~g 217 (421)
..+++....++++++ |++++++++|||+. +|+.+.+.+|+.+
T Consensus 159 ~KP~~~~~~~~~~~~---~~~~~~~~~IgD~~~~Di~~A~~aG~~~ 201 (203)
T TIGR02252 159 EKPDPKIFQEALERA---GISPEEALHIGDSLRNDYQGARAAGWRA 201 (203)
T ss_pred CCCCHHHHHHHHHHc---CCChhHEEEECCCchHHHHHHHHcCCee
Confidence 345677899999999 99999999999997 9999999999543
No 95
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=98.34 E-value=9.1e-07 Score=80.77 Aligned_cols=49 Identities=14% Similarity=0.007 Sum_probs=42.8
Q ss_pred cCCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEecC
Q 014608 171 PQGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMVSN 222 (421)
Q Consensus 171 p~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav~N 222 (421)
.....+....+.+++++ |++|+++++|||+.+|+...+.+|+.+|.+..
T Consensus 145 ~~~KP~~~~~~~~~~~~---~~~p~~~~~vgD~~~Di~~A~~~G~~~i~v~r 193 (198)
T TIGR01428 145 RAYKPAPQVYQLALEAL---GVPPDEVLFVASNPWDLGGAKKFGFKTAWVNR 193 (198)
T ss_pred CCCCCCHHHHHHHHHHh---CCChhhEEEEeCCHHHHHHHHHCCCcEEEecC
Confidence 44556788999999999 99999999999999999999999987777643
No 96
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=98.33 E-value=1.9e-06 Score=76.33 Aligned_cols=49 Identities=20% Similarity=0.158 Sum_probs=43.5
Q ss_pred CCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEecCCh
Q 014608 173 GAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMVSNAQ 224 (421)
Q Consensus 173 g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav~NA~ 224 (421)
..+|...+..+++++ +++++++++|||+.+|+++.+.+|+.++.+....
T Consensus 102 ~KP~~~~~~~~~~~~---~~~~~e~l~IGD~~~Di~~A~~aGi~~i~~~~~~ 150 (161)
T TIGR01261 102 RKPKIKLLEPYLKKN---LIDKARSYVIGDRETDMQLAENLGIRGIQYDEEE 150 (161)
T ss_pred CCCCHHHHHHHHHHc---CCCHHHeEEEeCCHHHHHHHHHCCCeEEEEChhh
Confidence 456889999999999 9999999999999999999999998777776544
No 97
>PHA02597 30.2 hypothetical protein; Provisional
Probab=98.32 E-value=1.6e-06 Score=79.14 Aligned_cols=47 Identities=9% Similarity=0.094 Sum_probs=41.1
Q ss_pred CCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCC--CceEEEecCChH
Q 014608 174 AGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIP--EVYGVMVSNAQE 225 (421)
Q Consensus 174 ~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~a--gv~gvav~NA~~ 225 (421)
.+|...+.++++++ | ++++++|||+.+|+...+.+ |+..|.+.++..
T Consensus 130 ~~kp~~~~~a~~~~---~--~~~~v~vgDs~~di~aA~~a~~Gi~~i~~~~~~~ 178 (197)
T PHA02597 130 ESKEKLFIKAKEKY---G--DRVVCFVDDLAHNLDAAHEALSQLPVIHMLRGER 178 (197)
T ss_pred cccHHHHHHHHHHh---C--CCcEEEeCCCHHHHHHHHHHHcCCcEEEecchhh
Confidence 34789999999999 8 78899999999999999999 988888866653
No 98
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=98.29 E-value=3e-06 Score=71.56 Aligned_cols=48 Identities=21% Similarity=0.112 Sum_probs=35.0
Q ss_pred eEEEEeCCCCCCCCCC-CC---CccHHHHHHHHHHHHcCCcEEEEEcCCCHHH
Q 014608 10 LMIVSDLDHTMVDHHD-AE---NLSLLRFNALWEAHYRRDSLLVFSTGRSPTL 58 (421)
Q Consensus 10 klI~~DLDGTLl~~~~-~~---~~s~~~~~al~~~l~~~g~~vviaTGRs~~~ 58 (421)
|+|+||+||||+.++. +. ......++++. .++++|+.++++|||+...
T Consensus 2 K~i~~DiDGTL~~~~~~~y~~~~~~~~~ie~L~-~l~~~G~~IiiaTGR~~~~ 53 (126)
T TIGR01689 2 KRLVMDLDNTITLTENGDYANVAPILAVIEKLR-HYKALGFEIVISSSRNMRT 53 (126)
T ss_pred CEEEEeCCCCcccCCCCcccccccCHHHHHHHH-HHHHCCCEEEEECCCCchh
Confidence 6899999999997642 11 12334455554 5678999999999999754
No 99
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=98.26 E-value=1.4e-06 Score=81.04 Aligned_cols=47 Identities=9% Similarity=-0.071 Sum_probs=41.7
Q ss_pred CCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEec
Q 014608 172 QGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMVS 221 (421)
Q Consensus 172 ~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav~ 221 (421)
...+++..+..+++++ |+++++|++|||+.+|++..+.+|+..+.+.
T Consensus 140 ~~KP~p~~~~~a~~~~---~~~p~~~l~igDs~~di~aA~~aG~~~i~~~ 186 (221)
T PRK10563 140 RWKPDPALMFHAAEAM---NVNVENCILVDDSSAGAQSGIAAGMEVFYFC 186 (221)
T ss_pred CCCCChHHHHHHHHHc---CCCHHHeEEEeCcHhhHHHHHHCCCEEEEEC
Confidence 4567889999999999 9999999999999999999999997666553
No 100
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=98.26 E-value=2e-06 Score=77.63 Aligned_cols=43 Identities=21% Similarity=0.195 Sum_probs=38.9
Q ss_pred CCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEE
Q 014608 174 AGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVM 219 (421)
Q Consensus 174 ~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gva 219 (421)
.++.....++++++ |++++++++|||+..|+...+.+|+.++.
T Consensus 141 KP~p~~~~~~~~~~---~~~~~~~l~vgD~~~di~aA~~~G~~~i~ 183 (184)
T TIGR01993 141 KPSPQAYEKALREA---GVDPERAIFFDDSARNIAAAKALGMKTVL 183 (184)
T ss_pred CCCHHHHHHHHHHh---CCCccceEEEeCCHHHHHHHHHcCCEEee
Confidence 56788999999999 99999999999999999999999966554
No 101
>PRK06769 hypothetical protein; Validated
Probab=98.24 E-value=5.8e-06 Score=74.13 Aligned_cols=49 Identities=18% Similarity=0.061 Sum_probs=43.8
Q ss_pred CCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEecCC
Q 014608 172 QGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMVSNA 223 (421)
Q Consensus 172 ~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav~NA 223 (421)
...++...+..+++++ ++++++|++|||+.+|+.+.+.+|+.+|.+..+
T Consensus 91 ~~KP~p~~~~~~~~~l---~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v~~g 139 (173)
T PRK06769 91 CRKPSTGMLLQAAEKH---GLDLTQCAVIGDRWTDIVAAAKVNATTILVRTG 139 (173)
T ss_pred CCCCCHHHHHHHHHHc---CCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecC
Confidence 3456788899999999 999999999999999999999999888888764
No 102
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=98.22 E-value=5.8e-05 Score=71.32 Aligned_cols=47 Identities=17% Similarity=0.121 Sum_probs=39.2
Q ss_pred cCCCCHHHHHHHHHHHHhhCCCC-CCcEEEEcCC-cCchhhhcCCCceEEEe
Q 014608 171 PQGAGKGQALAYLLRKFKCEGKV-PTNTLVCGDS-GNDAELFSIPEVYGVMV 220 (421)
Q Consensus 171 p~g~sKg~al~~L~~~l~~~gi~-~~~vl~~GDs-~NDi~M~~~agv~gvav 220 (421)
..+..+...++.+++++ |.. ++++++|||+ .+|+.+.+.+|+.++.|
T Consensus 192 ~~gKP~~~~~~~~~~~~---~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v 240 (242)
T TIGR01459 192 YSGKPYPAIFHKALKEC---SNIPKNRMLMVGDSFYTDILGANRLGIDTALV 240 (242)
T ss_pred cCCCCCHHHHHHHHHHc---CCCCcccEEEECCCcHHHHHHHHHCCCeEEEE
Confidence 35667778889999999 764 6799999999 69999999999777665
No 103
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=98.21 E-value=7.5e-06 Score=71.44 Aligned_cols=38 Identities=24% Similarity=0.221 Sum_probs=34.5
Q ss_pred CCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCC
Q 014608 173 GAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPE 214 (421)
Q Consensus 173 g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~ag 214 (421)
..+++..+.++++++ |+++ ++++|||+.+|+.+.+.+|
T Consensus 117 ~Kp~~~~~~~~~~~~---~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 117 AKPEPEIFLAALESL---GLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred CCcCHHHHHHHHHHc---CCCC-CEEEEeCCHHHHHHHHHcc
Confidence 566889999999999 9999 9999999999999988765
No 104
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=98.20 E-value=5.1e-06 Score=79.48 Aligned_cols=76 Identities=17% Similarity=0.080 Sum_probs=53.5
Q ss_pred CCeEEEEeCCCCCCCCCCCCCccHHHHHHHHHHHHcCCcEEEEEcCCCHHHHHHHHHhCCCCCCCEEEEccCcEEE
Q 014608 8 ARLMIVSDLDHTMVDHHDAENLSLLRFNALWEAHYRRDSLLVFSTGRSPTLYKQLRKEKPMLTPDITIMSVGTEIT 83 (421)
Q Consensus 8 ~~klI~~DLDGTLl~~~~~~~~s~~~~~al~~~l~~~g~~vviaTGRs~~~~~~l~~~~~~~~~d~~I~~nGa~I~ 83 (421)
..++|+|||||||+++..+..+.......++++|+++|+.++++|+.+...+..+.+.+++..+--.|.++|....
T Consensus 127 ~~~~i~~D~D~TL~~~~~~v~irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~yFDvII~~g~i~~ 202 (303)
T PHA03398 127 IPHVIVFDLDSTLITDEEPVRIRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEGYFDIIICGGRKAG 202 (303)
T ss_pred eccEEEEecCCCccCCCCccccCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCccccEEEECCCccc
Confidence 4689999999999999765433222234445578999999999997776677888888887533124555565443
No 105
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=98.19 E-value=1.5e-05 Score=74.18 Aligned_cols=37 Identities=24% Similarity=0.194 Sum_probs=29.9
Q ss_pred CHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEE
Q 014608 175 GKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVM 219 (421)
Q Consensus 175 sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gva 219 (421)
.|..++ +++ +..++++++||||.||+.+++.+| ..++
T Consensus 148 ~K~~~l----~~~---~~~~~~~i~iGDs~~Di~aa~~Ag-~~~a 184 (219)
T PRK09552 148 CKPSLI----RKL---SDTNDFHIVIGDSITDLEAAKQAD-KVFA 184 (219)
T ss_pred chHHHH----HHh---ccCCCCEEEEeCCHHHHHHHHHCC-ccee
Confidence 466544 456 778889999999999999999999 4554
No 106
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=98.18 E-value=1.1e-06 Score=91.09 Aligned_cols=45 Identities=16% Similarity=0.135 Sum_probs=37.7
Q ss_pred CCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEecCC
Q 014608 174 AGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMVSNA 223 (421)
Q Consensus 174 ~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav~NA 223 (421)
.+|+..+...++++ ++++|++|||+.+|+.+.+.+|+..+++...
T Consensus 385 ~~kP~~~~~al~~l-----~~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~ 429 (459)
T PRK06698 385 LNKSDLVKSILNKY-----DIKEAAVVGDRLSDINAAKDNGLIAIGCNFD 429 (459)
T ss_pred CCCcHHHHHHHHhc-----CcceEEEEeCCHHHHHHHHHCCCeEEEEeCC
Confidence 35778888888877 4689999999999999999999878877553
No 107
>PRK08238 hypothetical protein; Validated
Probab=98.17 E-value=3e-05 Score=80.29 Aligned_cols=37 Identities=16% Similarity=0.200 Sum_probs=30.7
Q ss_pred CcEEEEcCCcCchhhhcCCCceEEEecCChHHHHHHHHh
Q 014608 195 TNTLVCGDSGNDAELFSIPEVYGVMVSNAQEELLQWHAA 233 (421)
Q Consensus 195 ~~vl~~GDs~NDi~M~~~agv~gvav~NA~~elk~~a~~ 233 (421)
+++.++|||.||++|++.++ .+++| |+.+.+++.|+.
T Consensus 140 ~~~~yvGDS~~Dlp~~~~A~-~av~V-n~~~~l~~~a~~ 176 (479)
T PRK08238 140 RGFDYAGNSAADLPVWAAAR-RAIVV-GASPGVARAARA 176 (479)
T ss_pred cCeeEecCCHHHHHHHHhCC-CeEEE-CCCHHHHHHHHH
Confidence 55788999999999999999 99988 555557777764
No 108
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=98.15 E-value=1.3e-06 Score=79.78 Aligned_cols=36 Identities=14% Similarity=0.126 Sum_probs=32.9
Q ss_pred CCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcC
Q 014608 174 AGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSI 212 (421)
Q Consensus 174 ~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~ 212 (421)
.++...+..+++++ |+++++|++|||+.+|+.+.+.
T Consensus 161 KP~p~~~~~~~~~~---~~~~~~~i~vGD~~~Di~aA~~ 196 (197)
T TIGR01548 161 KPNPEPLILAAKAL---GVEACHAAMVGDTVDDIITGRK 196 (197)
T ss_pred CcCHHHHHHHHHHh---CcCcccEEEEeCCHHHHHHHHh
Confidence 56889999999999 9999999999999999998764
No 109
>PRK09449 dUMP phosphatase; Provisional
Probab=98.14 E-value=2.5e-06 Score=79.42 Aligned_cols=46 Identities=15% Similarity=0.137 Sum_probs=39.6
Q ss_pred CCCHHHHHHHHHHHHhhCCCC-CCcEEEEcCCc-CchhhhcCCCceEEEec
Q 014608 173 GAGKGQALAYLLRKFKCEGKV-PTNTLVCGDSG-NDAELFSIPEVYGVMVS 221 (421)
Q Consensus 173 g~sKg~al~~L~~~l~~~gi~-~~~vl~~GDs~-NDi~M~~~agv~gvav~ 221 (421)
..++...+.++++++ |+. ++++++|||+. +|+...+.+|+.++.+.
T Consensus 149 ~KP~p~~~~~~~~~~---~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~ 196 (224)
T PRK09449 149 AKPDVAIFDYALEQM---GNPDRSRVLMVGDNLHSDILGGINAGIDTCWLN 196 (224)
T ss_pred CCCCHHHHHHHHHHc---CCCCcccEEEEcCCcHHHHHHHHHCCCcEEEEC
Confidence 456788999999999 875 58999999998 79999999997777765
No 110
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=98.14 E-value=4.1e-06 Score=78.16 Aligned_cols=53 Identities=15% Similarity=0.176 Sum_probs=46.6
Q ss_pred ecCCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEecCChH
Q 014608 170 LPQGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMVSNAQE 225 (421)
Q Consensus 170 ~p~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav~NA~~ 225 (421)
.+++.+.+.....-+++| |++|++|++|.||.|.+...+.+|+..|++.+..+
T Consensus 138 v~~~KP~Pd~yL~Aa~~L---gv~P~~CvviEDs~~Gi~Aa~aAGm~vv~v~~~~~ 190 (221)
T COG0637 138 VARGKPAPDIYLLAAERL---GVDPEECVVVEDSPAGIQAAKAAGMRVVGVPAGHD 190 (221)
T ss_pred HhcCCCCCHHHHHHHHHc---CCChHHeEEEecchhHHHHHHHCCCEEEEecCCCC
Confidence 455577889999999999 99999999999999999999999988888887443
No 111
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=98.13 E-value=0.00011 Score=69.14 Aligned_cols=47 Identities=15% Similarity=0.073 Sum_probs=40.4
Q ss_pred CCCCHHHHHHHHHHHHhhCCCCCCcE-EEEcCCc-CchhhhcCCCceEEEec
Q 014608 172 QGAGKGQALAYLLRKFKCEGKVPTNT-LVCGDSG-NDAELFSIPEVYGVMVS 221 (421)
Q Consensus 172 ~g~sKg~al~~L~~~l~~~gi~~~~v-l~~GDs~-NDi~M~~~agv~gvav~ 221 (421)
.+.++...++.+++++ +++++++ ++|||+. +|+.+.+.+|+.++.|.
T Consensus 186 ~~KP~~~~~~~~~~~~---~~~~~~~~~~IGD~~~~Di~~A~~~G~~~i~v~ 234 (236)
T TIGR01460 186 VGKPSPAIYRAALNLL---QARPERRDVMVGDNLRTDILGAKNAGFDTLLVL 234 (236)
T ss_pred ecCCCHHHHHHHHHHh---CCCCccceEEECCCcHHHHHHHHHCCCcEEEEe
Confidence 3566788899999999 8888887 9999998 89999999997777764
No 112
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=98.13 E-value=3e-05 Score=69.26 Aligned_cols=49 Identities=18% Similarity=0.133 Sum_probs=42.6
Q ss_pred CCHHHHHHHHHHHHhhCCCCCCcEEEEcCCc-CchhhhcCCCceEEEecCChH
Q 014608 174 AGKGQALAYLLRKFKCEGKVPTNTLVCGDSG-NDAELFSIPEVYGVMVSNAQE 225 (421)
Q Consensus 174 ~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~-NDi~M~~~agv~gvav~NA~~ 225 (421)
.+++..+..+++++ |++++++++|||+. .|+...+.+|+.++.+.....
T Consensus 91 KP~p~~~~~~l~~~---~~~~~~~l~IGDs~~~Di~aA~~aGi~~i~v~~g~~ 140 (170)
T TIGR01668 91 KPPGCAFRRAHPEM---GLTSEQVAVVGDRLFTDVMGGNRNGSYTILVEPLVH 140 (170)
T ss_pred CCChHHHHHHHHHc---CCCHHHEEEECCcchHHHHHHHHcCCeEEEEccCcC
Confidence 45778889999999 99999999999998 799999999988888865543
No 113
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=98.11 E-value=3.1e-05 Score=76.93 Aligned_cols=48 Identities=19% Similarity=0.119 Sum_probs=42.9
Q ss_pred CCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEecC
Q 014608 172 QGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMVSN 222 (421)
Q Consensus 172 ~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav~N 222 (421)
.+.+|...+.++++++ +++++++++|||+.+|++..+.+|+..+.+..
T Consensus 102 ~rKP~p~~l~~a~~~l---~v~~~~svmIGDs~sDi~aAk~aGi~~I~v~~ 149 (354)
T PRK05446 102 CRKPKTGLVEEYLAEG---AIDLANSYVIGDRETDVQLAENMGIKGIRYAR 149 (354)
T ss_pred CCCCCHHHHHHHHHHc---CCCcccEEEEcCCHHHHHHHHHCCCeEEEEEC
Confidence 4567888999999999 99999999999999999999999988888733
No 114
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=98.10 E-value=1.6e-05 Score=73.62 Aligned_cols=46 Identities=28% Similarity=0.189 Sum_probs=36.3
Q ss_pred HHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEecCChHHHHHH
Q 014608 180 LAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMVSNAQEELLQW 230 (421)
Q Consensus 180 l~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav~NA~~elk~~ 230 (421)
++.|.+.+ |.+.+.+.+.|||.||++||+.++ ++++| |.++.|+++
T Consensus 164 v~rl~~~~---~~~~~~~~aYsDS~~D~pmL~~a~-~~~~V-np~~~L~~~ 209 (210)
T TIGR01545 164 VAQLEQKI---GSPLKLYSGYSDSKQDNPLLAFCE-HRWRV-SKRGELQQL 209 (210)
T ss_pred HHHHHHHh---CCChhheEEecCCcccHHHHHhCC-CcEEE-CcchHhccc
Confidence 33444555 556678899999999999999999 99987 777777653
No 115
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=98.07 E-value=1.7e-05 Score=77.36 Aligned_cols=48 Identities=6% Similarity=-0.092 Sum_probs=38.9
Q ss_pred CCCHHHHHHHHHHHHhhCCC-CCCcEEEEcCCcCchhhhcCCCceEEEecCC
Q 014608 173 GAGKGQALAYLLRKFKCEGK-VPTNTLVCGDSGNDAELFSIPEVYGVMVSNA 223 (421)
Q Consensus 173 g~sKg~al~~L~~~l~~~gi-~~~~vl~~GDs~NDi~M~~~agv~gvav~NA 223 (421)
+.++...+...++++ +. +++++++|||+.+|+.+.+.+|+..+.|..+
T Consensus 250 ~kp~p~~~~~~l~~~---~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i~v~~g 298 (300)
T PHA02530 250 KRPDDVVKEEIFWEK---IAPKYDVLLAVDDRDQVVDMWRRIGLECWQVAPG 298 (300)
T ss_pred CCCcHHHHHHHHHHH---hccCceEEEEEcCcHHHHHHHHHhCCeEEEecCC
Confidence 345666777777777 77 5799999999999999999999877877543
No 116
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=98.02 E-value=9.6e-05 Score=69.49 Aligned_cols=28 Identities=25% Similarity=0.315 Sum_probs=24.9
Q ss_pred EEEEcCCcCchhhhcCCCceEEEecCCh
Q 014608 197 TLVCGDSGNDAELFSIPEVYGVMVSNAQ 224 (421)
Q Consensus 197 vl~~GDs~NDi~M~~~agv~gvav~NA~ 224 (421)
++++||+.+|+.+.+.+|+.++.+..+.
T Consensus 187 ~I~IGDs~~Di~aA~~AGi~~I~v~~G~ 214 (237)
T PRK11009 187 RIFYGDSDNDITAAREAGARGIRILRAA 214 (237)
T ss_pred eEEEcCCHHHHHHHHHcCCcEEEEecCC
Confidence 8999999999999999998888876554
No 117
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=98.02 E-value=9.5e-06 Score=76.51 Aligned_cols=51 Identities=10% Similarity=-0.006 Sum_probs=43.9
Q ss_pred CCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCC-cCchhhhcCCCceEEEecCChH
Q 014608 172 QGAGKGQALAYLLRKFKCEGKVPTNTLVCGDS-GNDAELFSIPEVYGVMVSNAQE 225 (421)
Q Consensus 172 ~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs-~NDi~M~~~agv~gvav~NA~~ 225 (421)
...++......+++++ |++++++++|||+ ..|+...+.+|+.++.+.+...
T Consensus 161 ~~KP~p~~~~~a~~~~---~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~~~~ 212 (238)
T PRK10748 161 RSKPFSDMYHLAAEKL---NVPIGEILHVGDDLTTDVAGAIRCGMQACWINPENG 212 (238)
T ss_pred cCCCcHHHHHHHHHHc---CCChhHEEEEcCCcHHHHHHHHHCCCeEEEEcCCCc
Confidence 4456889999999999 9999999999999 5999999999988877765543
No 118
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=98.01 E-value=4.3e-05 Score=70.39 Aligned_cols=54 Identities=13% Similarity=0.257 Sum_probs=46.0
Q ss_pred CCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEecCChHHHHH
Q 014608 173 GAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMVSNAQEELLQ 229 (421)
Q Consensus 173 g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav~NA~~elk~ 229 (421)
..+.+.....+++++ |++++++++|||+..|+.+.+.+|+.+|.+.+......+
T Consensus 151 ~KP~p~~~~~~~~~~---g~~~~~~l~i~D~~~di~aA~~aG~~~i~v~~~~~~~~~ 204 (211)
T TIGR02247 151 RKPDPRIYQLMLERL---GVAPEECVFLDDLGSNLKPAAALGITTIKVSDEEQAIHD 204 (211)
T ss_pred CCCCHHHHHHHHHHc---CCCHHHeEEEcCCHHHHHHHHHcCCEEEEECCHHHHHHH
Confidence 345678899999999 999999999999999999999999888988775544433
No 119
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=97.97 E-value=2.4e-05 Score=82.92 Aligned_cols=55 Identities=16% Similarity=0.175 Sum_probs=45.1
Q ss_pred CCCcEEEEcCCcCchhhhcCCCceEEEecCChHHHHHHHHhhcCCCCceeeccCCCccHHHHHHH
Q 014608 193 VPTNTLVCGDSGNDAELFSIPEVYGVMVSNAQEELLQWHAANAKNNPKLTHATERCAAGIIQAIG 257 (421)
Q Consensus 193 ~~~~vl~~GDs~NDi~M~~~agv~gvav~NA~~elk~~a~~v~~~~~~~~~~~~~~~~GV~~~l~ 257 (421)
.+++++++||+.||+++++.+| .|++|+++.+..++.|+.+..++ +-.++.++++
T Consensus 446 ~~~~v~~vGDg~nD~~al~~A~-vgia~g~~~~~~~~~Ad~vi~~~---------~~~~l~~~i~ 500 (556)
T TIGR01525 446 EGGVVAMVGDGINDAPALAAAD-VGIAMGAGSDVAIEAADIVLLND---------DLSSLPTAID 500 (556)
T ss_pred cCCEEEEEECChhHHHHHhhCC-EeEEeCCCCHHHHHhCCEEEeCC---------CHHHHHHHHH
Confidence 3469999999999999999999 89999998888888777766543 3667777763
No 120
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=97.96 E-value=8.6e-05 Score=66.48 Aligned_cols=34 Identities=12% Similarity=0.012 Sum_probs=29.7
Q ss_pred CCCCCcEEEEcCCcCchhhhcCCCceEEEecCCh
Q 014608 191 GKVPTNTLVCGDSGNDAELFSIPEVYGVMVSNAQ 224 (421)
Q Consensus 191 gi~~~~vl~~GDs~NDi~M~~~agv~gvav~NA~ 224 (421)
|+++++|++|||+..|+...+.+|+..+++..+.
T Consensus 127 gl~p~e~l~VgDs~~di~aA~~aGi~~i~v~~g~ 160 (174)
T TIGR01685 127 VLKPAQILFFDDRTDNVREVWGYGVTSCYCPSGM 160 (174)
T ss_pred CCCHHHeEEEcChhHhHHHHHHhCCEEEEcCCCc
Confidence 4899999999999999999999998777775543
No 121
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=97.95 E-value=1.6e-05 Score=73.57 Aligned_cols=48 Identities=15% Similarity=0.090 Sum_probs=40.3
Q ss_pred CCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCc-CchhhhcCCCceEEEecC
Q 014608 173 GAGKGQALAYLLRKFKCEGKVPTNTLVCGDSG-NDAELFSIPEVYGVMVSN 222 (421)
Q Consensus 173 g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~-NDi~M~~~agv~gvav~N 222 (421)
..+++..+..++++++ |++++++++|||+. +|+.+.+.+|+.++.+..
T Consensus 151 ~KP~~~~~~~~~~~~~--~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~ 199 (224)
T TIGR02254 151 QKPDKEIFNYALERMP--KFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNP 199 (224)
T ss_pred CCCCHHHHHHHHHHhc--CCCchheEEECCCcHHHHHHHHHCCCcEEEECC
Confidence 4457788888888874 78999999999998 899999999977777654
No 122
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=97.95 E-value=3.1e-05 Score=70.78 Aligned_cols=53 Identities=13% Similarity=0.181 Sum_probs=46.1
Q ss_pred EecCCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEecCCh
Q 014608 169 ILPQGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMVSNAQ 224 (421)
Q Consensus 169 I~p~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav~NA~ 224 (421)
-.....+++...+++++++ |++|+++++|||+..|+...+.+|+.++.+.+..
T Consensus 136 ~~~~~KP~p~~~~~~~~~~---~~~p~~~l~vgD~~~di~aA~~aG~~~i~~~~~~ 188 (199)
T PRK09456 136 DLGMRKPEARIYQHVLQAE---GFSAADAVFFDDNADNIEAANALGITSILVTDKQ 188 (199)
T ss_pred ccCCCCCCHHHHHHHHHHc---CCChhHeEEeCCCHHHHHHHHHcCCEEEEecCCc
Confidence 3445677899999999999 9999999999999999999999998888877643
No 123
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=97.91 E-value=2.8e-05 Score=87.97 Aligned_cols=89 Identities=12% Similarity=0.082 Sum_probs=60.5
Q ss_pred cCCCceEEEEEEcccchHHHHHHHHHHHHhcCCc---EEEEEEcCeeEEEecCCCCHHHHHHHHHHHHhhCCCCCCcEEE
Q 014608 123 TEQRPHKVSFYVDKDKAQTVTQKLSEIFKNRGLD---VKIIYSGGMDLDILPQGAGKGQALAYLLRKFKCEGKVPTNTLV 199 (421)
Q Consensus 123 ~~~~~~ki~~~~~~~~~~~~~~~l~~~l~~~~~~---~~v~~s~~~~ldI~p~g~sKg~al~~L~~~l~~~gi~~~~vl~ 199 (421)
...+.+++.+..... ......+.+.+ +.. +..+.++. -......++....++++++ |++++++++
T Consensus 173 Lk~~G~~l~IvSn~~--~~~~~~~L~~~---gl~~~~Fd~iv~~~----~~~~~KP~Pe~~~~a~~~l---gv~p~e~v~ 240 (1057)
T PLN02919 173 CKNKGLKVAVASSAD--RIKVDANLAAA---GLPLSMFDAIVSAD----AFENLKPAPDIFLAAAKIL---GVPTSECVV 240 (1057)
T ss_pred HHhCCCeEEEEeCCc--HHHHHHHHHHc---CCChhHCCEEEECc----ccccCCCCHHHHHHHHHHc---CcCcccEEE
Confidence 344567777776532 22223332322 221 33343432 2334566789999999999 999999999
Q ss_pred EcCCcCchhhhcCCCceEEEecCC
Q 014608 200 CGDSGNDAELFSIPEVYGVMVSNA 223 (421)
Q Consensus 200 ~GDs~NDi~M~~~agv~gvav~NA 223 (421)
|||+.+|++..+.+|+..|.+...
T Consensus 241 IgDs~~Di~AA~~aGm~~I~v~~~ 264 (1057)
T PLN02919 241 IEDALAGVQAARAAGMRCIAVTTT 264 (1057)
T ss_pred EcCCHHHHHHHHHcCCEEEEECCC
Confidence 999999999999999888888654
No 124
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=97.91 E-value=9.1e-05 Score=68.63 Aligned_cols=38 Identities=21% Similarity=0.176 Sum_probs=29.4
Q ss_pred CCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEE
Q 014608 174 AGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVM 219 (421)
Q Consensus 174 ~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gva 219 (421)
..|..+++.+ +..++++++||||.||++|++.++ ..+|
T Consensus 143 ~~K~~~l~~~-------~~~~~~~i~iGDg~~D~~~a~~Ad-~~~a 180 (214)
T TIGR03333 143 CCKPSLIRKL-------SEPNDYHIVIGDSVTDVEAAKQSD-LCFA 180 (214)
T ss_pred CCHHHHHHHH-------hhcCCcEEEEeCCHHHHHHHHhCC-eeEe
Confidence 3467666544 335688999999999999999999 5555
No 125
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=97.83 E-value=0.0002 Score=64.21 Aligned_cols=37 Identities=19% Similarity=0.205 Sum_probs=31.0
Q ss_pred CCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCC
Q 014608 172 QGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPE 214 (421)
Q Consensus 172 ~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~ag 214 (421)
.+..|+..++.+++++ +++++++|||.||+++++.++
T Consensus 146 ~g~~K~~~~~~~~~~~------~~~~i~iGD~~~D~~aa~~~d 182 (188)
T TIGR01489 146 CGCCKGKVIHKLSEPK------YQHIIYIGDGVTDVCPAKLSD 182 (188)
T ss_pred CCCCHHHHHHHHHhhc------CceEEEECCCcchhchHhcCC
Confidence 4457988888876642 588999999999999999988
No 126
>PF13474 SnoaL_3: SnoaL-like domain; PDB: 2GXF_A 3KSP_A 3KE7_A 3BB9_E 3CNX_A 3F7S_A 3GWR_B.
Probab=97.76 E-value=0.00021 Score=59.08 Aligned_cols=109 Identities=12% Similarity=0.099 Sum_probs=79.1
Q ss_pred HHHHHHhcccccCCHHHHHHHHhccCCCceEeCCCC--cccCHHHHHHHHHhhcCCCCCceEEEEEeeeEEeeeeCCeEE
Q 014608 292 LFYERWRRAEIDNSEIYLSSLKANCCPSGFCVPPSG--GEISLAEAINQFRKCYGDKQGKQFRVWVDRVLSTEIGPGTWL 369 (421)
Q Consensus 292 ~~~e~w~~~~~~~~~~~~~~l~~~~~p~~~~v~~~G--~~~~~~~~~~~~~~~~g~~~g~~~~i~vd~~~~~~~~~~~~~ 369 (421)
.++++|..+ .+ ...++.+++.++|++++|.+.+ .....+++.+.++...+..++ +.+....+.+. ..++.++
T Consensus 3 ~~~~~~~~a-~~--~~D~~~~~~~~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~v~-~~~~~a~ 76 (121)
T PF13474_consen 3 ALLEEWIEA-FE--RGDIDALLSLFSDDFVFFGTGPGEIWRGREAIRAYFERDFESFRP--ISIEFEDVQVS-VSGDVAV 76 (121)
T ss_dssp HHHHHHHHH-HH--CT-HHHHHHHEEEEEEEEETTSSSEEESHHHHHHHHHHHHHTHSE--EEEEEEEEEEE-EETTEEE
T ss_pred HHHHHHHHH-HH--hCCHHHHHHhhCCCEEEEcCCCCceECCHHHHHHHHHHHhhhCce--EEEEEEEEEEE-ECCCEEE
Confidence 455666665 22 3578899999999999999664 345899999999998886555 99999999986 5899999
Q ss_pred EEEee-eEEe--Ccce-eeEEEEEEEEEeCCCCeeEEEeeee
Q 014608 370 VKFHK-WELS--GEER-ACSIVSIIVRIKDASDHTYMHVHET 407 (421)
Q Consensus 370 v~~~~-~~~~--~~~~-~~~~~t~~~~~~~~~~~~w~h~het 407 (421)
|.+.. ++.. +... ...+.|.+|++. .+++.+.|+|-.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~r~t~v~~k~-~~~Wki~h~H~S 117 (121)
T PF13474_consen 77 VTGEFRLRFRNDGEEIEMRGRATFVFRKE-DGGWKIVHIHWS 117 (121)
T ss_dssp EEEEEEEEEECTTCEEEEEEEEEEEEEEE-TTEEEEEEEEEE
T ss_pred EEEEEEEEEecCCccceeeEEEEEEEEEE-CCEEEEEEEEec
Confidence 98865 3443 3332 225888888774 566677777754
No 127
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=97.73 E-value=0.00027 Score=79.83 Aligned_cols=62 Identities=21% Similarity=0.132 Sum_probs=48.3
Q ss_pred EEEecCCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEecC-ChHHHHHHHHhhcCCC
Q 014608 167 LDILPQGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMVSN-AQEELLQWHAANAKNN 238 (421)
Q Consensus 167 ldI~p~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav~N-A~~elk~~a~~v~~~~ 238 (421)
-.+.|. .|..-++.+.+ . | .-|.++||+.||.+|++.|+ .||||++ +.+-.|++|+.+..++
T Consensus 665 aR~sPe--qK~~IV~~lq~-~---g---~vv~~~GDG~ND~paLk~Ad-VGiamg~~G~~vak~aADivL~dd 727 (997)
T TIGR01106 665 ARTSPQ--QKLIIVEGCQR-Q---G---AIVAVTGDGVNDSPALKKAD-IGVAMGIAGSDVSKQAADMILLDD 727 (997)
T ss_pred EECCHH--HHHHHHHHHHH-C---C---CEEEEECCCcccHHHHhhCC-cceecCCcccHHHHHhhceEEecC
Confidence 356665 47776666653 3 4 47999999999999999999 7999995 6888888888876653
No 128
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=97.72 E-value=0.0002 Score=62.40 Aligned_cols=29 Identities=17% Similarity=0.161 Sum_probs=25.6
Q ss_pred HHHHHhhCCCCCCcEEEEcCCcCchhhhcCCC
Q 014608 183 LLRKFKCEGKVPTNTLVCGDSGNDAELFSIPE 214 (421)
Q Consensus 183 L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~ag 214 (421)
.++.+ |.++++|++|||+.+|+.+...+|
T Consensus 107 ~l~~l---~~~p~~~i~i~Ds~~~~~aa~~ng 135 (148)
T smart00577 107 DLSLL---GRDLSNVIIIDDSPDSWPFHPENL 135 (148)
T ss_pred cHHHc---CCChhcEEEEECCHHHhhcCccCE
Confidence 36778 999999999999999999987766
No 129
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=97.72 E-value=0.0014 Score=62.59 Aligned_cols=49 Identities=18% Similarity=0.173 Sum_probs=38.9
Q ss_pred CCCHHHHHHHHHHHHhhCCCCCCcEEEEcCC-cCchhhhcCCCceEEEecCCh
Q 014608 173 GAGKGQALAYLLRKFKCEGKVPTNTLVCGDS-GNDAELFSIPEVYGVMVSNAQ 224 (421)
Q Consensus 173 g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs-~NDi~M~~~agv~gvav~NA~ 224 (421)
|..-....+..++.+ +.++++++++||+ .+|+.+...+|+-++.|.-..
T Consensus 189 GKP~~~i~~~al~~~---~~~~~~~~mVGD~~~TDI~~a~~~G~~t~LV~TGv 238 (269)
T COG0647 189 GKPSPAIYEAALEKL---GLDRSEVLMVGDRLDTDILGAKAAGLDTLLVLTGV 238 (269)
T ss_pred CCCCHHHHHHHHHHh---CCCcccEEEEcCCchhhHHHHHHcCCCEEEEccCC
Confidence 333345557888889 8899999999998 789999999997777765554
No 130
>PRK10671 copA copper exporting ATPase; Provisional
Probab=97.67 E-value=9.6e-05 Score=82.13 Aligned_cols=71 Identities=21% Similarity=0.366 Sum_probs=56.9
Q ss_pred EEecCCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEecCChHHHHHHHHhhcCCCCceeeccCC
Q 014608 168 DILPQGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMVSNAQEELLQWHAANAKNNPKLTHATER 247 (421)
Q Consensus 168 dI~p~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav~NA~~elk~~a~~v~~~~~~~~~~~~~ 247 (421)
++.|. +|..+++.+ +..+++++++||+.||++|++.+| .||+|+|+.+..++.|+.+...+
T Consensus 695 ~~~p~--~K~~~i~~l-------~~~~~~v~~vGDg~nD~~al~~Ag-vgia~g~g~~~a~~~ad~vl~~~--------- 755 (834)
T PRK10671 695 GVLPD--GKAEAIKRL-------QSQGRQVAMVGDGINDAPALAQAD-VGIAMGGGSDVAIETAAITLMRH--------- 755 (834)
T ss_pred CCCHH--HHHHHHHHH-------hhcCCEEEEEeCCHHHHHHHHhCC-eeEEecCCCHHHHHhCCEEEecC---------
Confidence 34554 477766654 334679999999999999999999 79999999999999888776543
Q ss_pred CccHHHHHHH
Q 014608 248 CAAGIIQAIG 257 (421)
Q Consensus 248 ~~~GV~~~l~ 257 (421)
+-.+|.++++
T Consensus 756 ~~~~i~~~i~ 765 (834)
T PRK10671 756 SLMGVADALA 765 (834)
T ss_pred CHHHHHHHHH
Confidence 3778888886
No 131
>PF14534 DUF4440: Domain of unknown function (DUF4440); PDB: 3HX8_A 3SOY_A 3ROB_B 3GZR_A 3B7C_A 3CU3_A 3FSD_A 2R4I_C 1TP6_A.
Probab=97.66 E-value=0.00064 Score=54.57 Aligned_cols=88 Identities=10% Similarity=0.026 Sum_probs=61.8
Q ss_pred HHHHHHHhccCCCceEeCCCCcccCHHHHHHHHHhhcCCCCCceEEEEEeeeEEeeeeCCeEEEEEeeeEEe-Ccc--e-
Q 014608 307 IYLSSLKANCCPSGFCVPPSGGEISLAEAINQFRKCYGDKQGKQFRVWVDRVLSTEIGPGTWLVKFHKWELS-GEE--R- 382 (421)
Q Consensus 307 ~~~~~l~~~~~p~~~~v~~~G~~~~~~~~~~~~~~~~g~~~g~~~~i~vd~~~~~~~~~~~~~v~~~~~~~~-~~~--~- 382 (421)
..++.|.+.++|+|++++|+|..++..+.++.+...+...+. +++....+. .. ++.++|+++-.-.. ++. .
T Consensus 15 ~D~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~~~~~~~~~~--~~~~~~~v~--~~-gd~a~~~~~~~~~~~~~g~~~~ 89 (107)
T PF14534_consen 15 GDIDALASLYADDFVFVGPGGTILGKEAILAAFKSGFARFSS--IKFEDVEVR--VL-GDTAVVRGRWTFTWRGDGEPVT 89 (107)
T ss_dssp THHHHHHTTEEEEEEEEETTSEEEEHHHHHHHHHHHCEEEEE--EEEEEEEEE--EE-TTEEEEEEEEEEEETTTTEEEE
T ss_pred CCHHHHHhhhCCCEEEECCCCCEeCHHHHHHHHhhccCCCce--EEEEEEEEE--EE-CCEEEEEEEEEEEEecCCceEE
Confidence 367888999999999999999999999999999986543333 655553333 33 88999999955444 222 1
Q ss_pred eeEEEEEEEEEeCCCCeeEE
Q 014608 383 ACSIVSIIVRIKDASDHTYM 402 (421)
Q Consensus 383 ~~~~~t~~~~~~~~~~~~w~ 402 (421)
..-+.|.++.+. ++ .|+
T Consensus 90 ~~~~~~~v~~k~-~g--~W~ 106 (107)
T PF14534_consen 90 IRGRFTSVWKKQ-DG--KWR 106 (107)
T ss_dssp EEEEEEEEEEEE-TT--EEE
T ss_pred EEEEEEEEEEEe-CC--EEE
Confidence 235556677664 33 565
No 132
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=97.66 E-value=0.00054 Score=61.42 Aligned_cols=49 Identities=20% Similarity=0.202 Sum_probs=41.5
Q ss_pred CCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEecCCh
Q 014608 173 GAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMVSNAQ 224 (421)
Q Consensus 173 g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav~NA~ 224 (421)
...|.-.+..+++++ +++++..+++||...|+.....+|+.++.+.+..
T Consensus 104 RKP~~gm~~~~~~~~---~iD~~~s~~VGD~~~Dlq~a~n~gi~~~~~~~~~ 152 (181)
T COG0241 104 RKPKPGMLLSALKEY---NIDLSRSYVVGDRLTDLQAAENAGIKGVLVLTGI 152 (181)
T ss_pred cCCChHHHHHHHHHh---CCCccceEEecCcHHHHHHHHHCCCCceEEEcCc
Confidence 345888899999999 9999999999999999999999996666655443
No 133
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=97.61 E-value=0.00042 Score=78.56 Aligned_cols=60 Identities=18% Similarity=0.231 Sum_probs=49.1
Q ss_pred EEecCCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEec-CChHHHHHHHHhhcCC
Q 014608 168 DILPQGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMVS-NAQEELLQWHAANAKN 237 (421)
Q Consensus 168 dI~p~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav~-NA~~elk~~a~~v~~~ 237 (421)
.+.|. .|..-++.+.++ | +.++++||+.||.+|++.++ .||||+ ++.+..|+.|+.+..+
T Consensus 728 r~sP~--~K~~iV~~lq~~----g---~~Vam~GDGvNDapaLk~Ad-VGIAmg~~gt~vak~aADivl~d 788 (1053)
T TIGR01523 728 RCAPQ--TKVKMIEALHRR----K---AFCAMTGDGVNDSPSLKMAN-VGIAMGINGSDVAKDASDIVLSD 788 (1053)
T ss_pred ecCHH--HHHHHHHHHHhc----C---CeeEEeCCCcchHHHHHhCC-ccEecCCCccHHHHHhcCEEEec
Confidence 46665 388777776653 2 57999999999999999999 799998 8889899988887654
No 134
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=97.58 E-value=0.0008 Score=58.78 Aligned_cols=45 Identities=18% Similarity=0.197 Sum_probs=38.6
Q ss_pred CHHHHHHHHHHHHhhCCCCCCcEEEEcCC-cCchhhhcCCCceEEEecC
Q 014608 175 GKGQALAYLLRKFKCEGKVPTNTLVCGDS-GNDAELFSIPEVYGVMVSN 222 (421)
Q Consensus 175 sKg~al~~L~~~l~~~gi~~~~vl~~GDs-~NDi~M~~~agv~gvav~N 222 (421)
.=+.|++..++++ ++++++|+++||. ..|+-.-..+|+++|.|..
T Consensus 94 P~~~~fr~Al~~m---~l~~~~vvmVGDqL~TDVlggnr~G~~tIlV~P 139 (175)
T COG2179 94 PFGRAFRRALKEM---NLPPEEVVMVGDQLFTDVLGGNRAGMRTILVEP 139 (175)
T ss_pred ccHHHHHHHHHHc---CCChhHEEEEcchhhhhhhcccccCcEEEEEEE
Confidence 3467788888888 9999999999997 7899999999988888754
No 135
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=97.58 E-value=0.00026 Score=66.55 Aligned_cols=66 Identities=24% Similarity=0.274 Sum_probs=46.4
Q ss_pred cccCCCeEEEEeCCCCCCCCCCC-------CCcc------------------------HHHHHHHHHHHHcCCcEEEEEc
Q 014608 4 LSAAARLMIVSDLDHTMVDHHDA-------ENLS------------------------LLRFNALWEAHYRRDSLLVFST 52 (421)
Q Consensus 4 l~~~~~klI~~DLDGTLl~~~~~-------~~~s------------------------~~~~~al~~~l~~~g~~vviaT 52 (421)
|.+.+...|+|||||||+++.+. .+.. ......+++.++++|+.++++|
T Consensus 58 ~~~~~p~aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~l~~~G~~i~iVT 137 (237)
T TIGR01672 58 LEGRPPIAVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRGDAIFFVT 137 (237)
T ss_pred cCCCCCeEEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHHHHHCCCEEEEEe
Confidence 55666679999999999998751 1110 0013455667889999999999
Q ss_pred CC----CHHHHHHHHHhCCCC
Q 014608 53 GR----SPTLYKQLRKEKPML 69 (421)
Q Consensus 53 GR----s~~~~~~l~~~~~~~ 69 (421)
+| ....+..+.+.+++.
T Consensus 138 nr~~~k~~~~a~~ll~~lGi~ 158 (237)
T TIGR01672 138 GRTPGKTDTVSKTLAKNFHIP 158 (237)
T ss_pred CCCCCcCHHHHHHHHHHhCCc
Confidence 99 445677788777763
No 136
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=97.57 E-value=0.0011 Score=65.40 Aligned_cols=37 Identities=16% Similarity=0.153 Sum_probs=35.0
Q ss_pred CHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCC
Q 014608 175 GKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPE 214 (421)
Q Consensus 175 sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~ag 214 (421)
+|+..++.+++++ |++++++++|||+..|+.+.+...
T Consensus 87 pk~~~i~~~~~~l---~i~~~~~vfidD~~~d~~~~~~~l 123 (320)
T TIGR01686 87 PKSESLRKIAKKL---NLGTDSFLFIDDNPAERANVKITL 123 (320)
T ss_pred chHHHHHHHHHHh---CCCcCcEEEECCCHHHHHHHHHHC
Confidence 6999999999999 999999999999999999998765
No 137
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=97.56 E-value=0.00051 Score=77.32 Aligned_cols=125 Identities=18% Similarity=0.170 Sum_probs=85.0
Q ss_pred HHHHHHHHcCCcEEEEEcCCCHHHHHHHHHhCCCCCCCEEEEccCcEEEeCCccCCcccHHHHHhchhhhhHHHHHhhcC
Q 014608 35 NALWEAHYRRDSLLVFSTGRSPTLYKQLRKEKPMLTPDITIMSVGTEITYGDAMVPDNGWVEVLNQKWDKKIVTEEASRF 114 (421)
Q Consensus 35 ~al~~~l~~~g~~vviaTGRs~~~~~~l~~~~~~~~~d~~I~~nGa~I~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 114 (421)
+++. .|++.|+++++.||-.+..+..+.+++++...+. .++.+.. +
T Consensus 586 ~aI~-~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~-------~vi~G~~--------------------------~ 631 (941)
T TIGR01517 586 EAVQ-ECQRAGITVRMVTGDNIDTAKAIARNCGILTFGG-------LAMEGKE--------------------------F 631 (941)
T ss_pred HHHH-HHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCc-------eEeeHHH--------------------------h
Confidence 3444 6889999999999999999999999999753321 1111100 0
Q ss_pred CCCcccCCcCCCceEEEEEEcccchHHHHHHHHHHHHhcCCcEEEEEEcCeeEEEecCCCCHHHHHHHHHHHHhhCCCCC
Q 014608 115 PELKLQSETEQRPHKVSFYVDKDKAQTVTQKLSEIFKNRGLDVKIIYSGGMDLDILPQGAGKGQALAYLLRKFKCEGKVP 194 (421)
Q Consensus 115 ~~l~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~s~~~~ldI~p~g~sKg~al~~L~~~l~~~gi~~ 194 (421)
..+ . + +++.+.+.+ .. .+-.+.|. .|..-++.|.++ |
T Consensus 632 ~~l-----------------~----~---~el~~~i~~----~~------Vfar~sPe--~K~~iV~~lq~~----g--- 668 (941)
T TIGR01517 632 RRL-----------------V----Y---EEMDPILPK----LR------VLARSSPL--DKQLLVLMLKDM----G--- 668 (941)
T ss_pred hhC-----------------C----H---HHHHHHhcc----Ce------EEEECCHH--HHHHHHHHHHHC----C---
Confidence 000 0 0 122222221 22 22356675 488777776553 3
Q ss_pred CcEEEEcCCcCchhhhcCCCceEEEec-CChHHHHHHHHhhcCC
Q 014608 195 TNTLVCGDSGNDAELFSIPEVYGVMVS-NAQEELLQWHAANAKN 237 (421)
Q Consensus 195 ~~vl~~GDs~NDi~M~~~agv~gvav~-NA~~elk~~a~~v~~~ 237 (421)
..|+++||+.||.++++.|+ .||||+ ++.+-.|+.|+.+..+
T Consensus 669 ~vVam~GDGvNDapALk~Ad-VGIAmg~~gtdvAk~aADivL~d 711 (941)
T TIGR01517 669 EVVAVTGDGTNDAPALKLAD-VGFSMGISGTEVAKEASDIILLD 711 (941)
T ss_pred CEEEEECCCCchHHHHHhCC-cceecCCCccHHHHHhCCEEEec
Confidence 47999999999999999999 799999 8999999988877654
No 138
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=97.42 E-value=0.00011 Score=68.26 Aligned_cols=46 Identities=26% Similarity=0.332 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHhhCCCCCCcEEEEcCC-cCchhhhcCCCceEEEecCCh
Q 014608 176 KGQALAYLLRKFKCEGKVPTNTLVCGDS-GNDAELFSIPEVYGVMVSNAQ 224 (421)
Q Consensus 176 Kg~al~~L~~~l~~~gi~~~~vl~~GDs-~NDi~M~~~agv~gvav~NA~ 224 (421)
-...-+++++++ |++|+++++|||+ .||+...+.+|+.+|-+....
T Consensus 156 ~~~~f~~~~~~~---g~~p~~~l~VgD~~~~di~gA~~~G~~~vwi~~~~ 202 (229)
T COG1011 156 DPEIFEYALEKL---GVPPEEALFVGDSLENDILGARALGMKTVWINRGG 202 (229)
T ss_pred CcHHHHHHHHHc---CCCcceEEEECCChhhhhHHHHhcCcEEEEECCCC
Confidence 467889999999 9999999999997 677799999998777655443
No 139
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=97.41 E-value=0.001 Score=73.03 Aligned_cols=62 Identities=19% Similarity=0.251 Sum_probs=50.4
Q ss_pred eEEEecCCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEecCChHHHHHHHHhhcCC
Q 014608 166 DLDILPQGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMVSNAQEELLQWHAANAKN 237 (421)
Q Consensus 166 ~ldI~p~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav~NA~~elk~~a~~v~~~ 237 (421)
+-.+.|.. |..-++.+.++ | ..+.++||+.||.++|+.++ .||||+++.+..|+.|+.+..+
T Consensus 515 fAr~~Pe~--K~~iV~~lq~~----G---~~VamvGDGvNDapAL~~Ad-VGIAm~~gtdvAkeaADivLl~ 576 (755)
T TIGR01647 515 FAEVFPEH--KYEIVEILQKR----G---HLVGMTGDGVNDAPALKKAD-VGIAVAGATDAARSAADIVLTE 576 (755)
T ss_pred EEecCHHH--HHHHHHHHHhc----C---CEEEEEcCCcccHHHHHhCC-eeEEecCCcHHHHHhCCEEEEc
Confidence 34677764 87777776542 3 57999999999999999999 7999999999999988876654
No 140
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=97.41 E-value=0.0013 Score=73.24 Aligned_cols=123 Identities=18% Similarity=0.232 Sum_probs=83.3
Q ss_pred HHHHHHHHcCCcEEEEEcCCCHHHHHHHHHhCCCCCCCEEEEccCcEEEeCCccCCcccHHHHHhchhhhhHHHHHhhcC
Q 014608 35 NALWEAHYRRDSLLVFSTGRSPTLYKQLRKEKPMLTPDITIMSVGTEITYGDAMVPDNGWVEVLNQKWDKKIVTEEASRF 114 (421)
Q Consensus 35 ~al~~~l~~~g~~vviaTGRs~~~~~~l~~~~~~~~~d~~I~~nGa~I~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 114 (421)
+++. +|++.|+.+++.||-....+..+.+++++...+ ++.+.. ++
T Consensus 522 ~aI~-~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~~~---------v~~g~~----------l~--------------- 566 (867)
T TIGR01524 522 EAIA-ALFKNGINVKVLTGDNEIVTARICQEVGIDAND---------FLLGAD----------IE--------------- 566 (867)
T ss_pred HHHH-HHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCC---------eeecHh----------hh---------------
Confidence 3444 788999999999999999999999999873211 111100 00
Q ss_pred CCCcccCCcCCCceEEEEEEcccchHHHHHHHHHHHHhcCCcEEEEEEcCeeEEEecCCCCHHHHHHHHHHHHhhCCCCC
Q 014608 115 PELKLQSETEQRPHKVSFYVDKDKAQTVTQKLSEIFKNRGLDVKIIYSGGMDLDILPQGAGKGQALAYLLRKFKCEGKVP 194 (421)
Q Consensus 115 ~~l~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~s~~~~ldI~p~g~sKg~al~~L~~~l~~~gi~~ 194 (421)
.+ + . +++.+.+.+ +. .+-.+.|.. |..-++.+.++ |
T Consensus 567 -~~-----------------~---~----~el~~~~~~----~~------vfAr~~Pe~--K~~iV~~lq~~----G--- 602 (867)
T TIGR01524 567 -EL-----------------S---D----EELARELRK----YH------IFARLTPMQ--KSRIIGLLKKA----G--- 602 (867)
T ss_pred -hC-----------------C---H----HHHHHHhhh----Ce------EEEECCHHH--HHHHHHHHHhC----C---
Confidence 00 0 0 122222221 22 223566653 77777776542 3
Q ss_pred CcEEEEcCCcCchhhhcCCCceEEEecCChHHHHHHHHhhcCC
Q 014608 195 TNTLVCGDSGNDAELFSIPEVYGVMVSNAQEELLQWHAANAKN 237 (421)
Q Consensus 195 ~~vl~~GDs~NDi~M~~~agv~gvav~NA~~elk~~a~~v~~~ 237 (421)
+.+.++||+.||.++++.|+ .||||+++.+..|+.|+.+..+
T Consensus 603 ~vVam~GDGvNDapALk~Ad-VGIAmg~gtdvAk~aADiVLld 644 (867)
T TIGR01524 603 HTVGFLGDGINDAPALRKAD-VGISVDTAADIAKEASDIILLE 644 (867)
T ss_pred CEEEEECCCcccHHHHHhCC-EEEEeCCccHHHHHhCCEEEec
Confidence 57999999999999999999 7999999999999988877644
No 141
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=97.41 E-value=0.00056 Score=72.66 Aligned_cols=66 Identities=17% Similarity=0.178 Sum_probs=49.7
Q ss_pred CHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEecCChHHHHHHHHhhcCCCCceeeccCCCccHHHH
Q 014608 175 GKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMVSNAQEELLQWHAANAKNNPKLTHATERCAAGIIQ 254 (421)
Q Consensus 175 sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav~NA~~elk~~a~~v~~~~~~~~~~~~~~~~GV~~ 254 (421)
+|...++.+.+ +.++++++||+.||.++++.++ .|++|+++.+..++.|+.+..++ +-.++.+
T Consensus 454 ~K~~~v~~l~~-------~~~~v~~VGDg~nD~~al~~A~-vgia~g~g~~~a~~~Advvl~~~---------~l~~l~~ 516 (562)
T TIGR01511 454 DKAALIKELQE-------KGRVVAMVGDGINDAPALAQAD-VGIAIGAGTDVAIEAADVVLMRN---------DLNDVAT 516 (562)
T ss_pred HHHHHHHHHHH-------cCCEEEEEeCCCccHHHHhhCC-EEEEeCCcCHHHHhhCCEEEeCC---------CHHHHHH
Confidence 57666655543 4589999999999999999999 79999998887787776665433 2456666
Q ss_pred HHH
Q 014608 255 AIG 257 (421)
Q Consensus 255 ~l~ 257 (421)
+++
T Consensus 517 ~i~ 519 (562)
T TIGR01511 517 AID 519 (562)
T ss_pred HHH
Confidence 553
No 142
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=97.39 E-value=0.00056 Score=73.49 Aligned_cols=98 Identities=13% Similarity=0.136 Sum_probs=69.3
Q ss_pred CHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEecCChHHHHHHHHhhcCCCCceeeccCCCccHHHH
Q 014608 175 GKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMVSNAQEELLQWHAANAKNNPKLTHATERCAAGIIQ 254 (421)
Q Consensus 175 sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav~NA~~elk~~a~~v~~~~~~~~~~~~~~~~GV~~ 254 (421)
+|...++.+.++- ..++++||+.||.++++.++ .|+||+++.+..|+.|+.+.-+++ -..+.+
T Consensus 496 dK~~~v~~lq~~g-------~~VamvGDG~NDapAL~~Ad-vGiAm~~gt~~akeaadivLldd~---------~s~Iv~ 558 (675)
T TIGR01497 496 DKIALIRQEQAEG-------KLVAMTGDGTNDAPALAQAD-VGVAMNSGTQAAKEAANMVDLDSD---------PTKLIE 558 (675)
T ss_pred HHHHHHHHHHHcC-------CeEEEECCCcchHHHHHhCC-EeEEeCCCCHHHHHhCCEEECCCC---------HHHHHH
Confidence 5888888876643 46999999999999999999 899999999999998877765432 567777
Q ss_pred HHHH--hhCCCCCCCCCCCCCCCCccccCCchhHHHHHHHHHHHHhcc
Q 014608 255 AIGH--FKLGPSTSPRDIKDESDGEVKSIDLGHEVVKLYLFYERWRRA 300 (421)
Q Consensus 255 ~l~~--~~l~~~~~~r~~~~~~~~~~~~~~~~~evv~~~~~~e~w~~~ 300 (421)
+++. -.+ .+.. .+-+++.+..|-+++.-+-.-|.+
T Consensus 559 av~~GR~~~---~t~~--------~~~t~~~~~~~~~~~~~~~~~~~~ 595 (675)
T TIGR01497 559 VVHIGKQLL---ITRG--------ALTTFSIANDVAKYFAIIPAIFAA 595 (675)
T ss_pred HHHHHHHHH---HHHH--------HHheeeecccHHHHHHHHHHHHHh
Confidence 7743 122 1111 122455666666666666555544
No 143
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=97.34 E-value=0.00058 Score=72.17 Aligned_cols=54 Identities=15% Similarity=0.135 Sum_probs=42.9
Q ss_pred CHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEec-CChHHHHHHHHhhcC
Q 014608 175 GKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMVS-NAQEELLQWHAANAK 236 (421)
Q Consensus 175 sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav~-NA~~elk~~a~~v~~ 236 (421)
+|...++.+.+ ..++++++||+.||+++++.++ .|++|+ ++.+..++.|+.+..
T Consensus 413 ~K~~~i~~l~~-------~~~~v~~vGDg~nD~~al~~A~-vgia~g~~~~~~~~~~ad~vl~ 467 (536)
T TIGR01512 413 DKLEIVKELRE-------KYGPVAMVGDGINDAPALAAAD-VGIAMGASGSDVAIETADVVLL 467 (536)
T ss_pred HHHHHHHHHHh-------cCCEEEEEeCCHHHHHHHHhCC-EEEEeCCCccHHHHHhCCEEEE
Confidence 56665555533 3489999999999999999999 799999 788888887766553
No 144
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=97.33 E-value=0.0006 Score=73.37 Aligned_cols=85 Identities=14% Similarity=0.204 Sum_probs=59.8
Q ss_pred CcEEEEcCCcCchhhhcCCCceEEEecCChHHHHHHHHhhcCCCCceeeccCCCccHHHHHHHH--hhCCCCCCCCCCCC
Q 014608 195 TNTLVCGDSGNDAELFSIPEVYGVMVSNAQEELLQWHAANAKNNPKLTHATERCAAGIIQAIGH--FKLGPSTSPRDIKD 272 (421)
Q Consensus 195 ~~vl~~GDs~NDi~M~~~agv~gvav~NA~~elk~~a~~v~~~~~~~~~~~~~~~~GV~~~l~~--~~l~~~~~~r~~~~ 272 (421)
+-+.++||+.||.++|+.++ .|+||+++.+-.|+.|+.+.-+++ -..+.++++. -.| .+...+
T Consensus 508 ~~VaMtGDGvNDAPALa~AD-VGIAMgsGTdvAkeAADiVLldd~---------~s~Iv~av~~GR~~~---~tr~~~-- 572 (679)
T PRK01122 508 RLVAMTGDGTNDAPALAQAD-VGVAMNSGTQAAKEAGNMVDLDSN---------PTKLIEVVEIGKQLL---MTRGAL-- 572 (679)
T ss_pred CeEEEECCCcchHHHHHhCC-EeEEeCCCCHHHHHhCCEEEeCCC---------HHHHHHHHHHHHHHH---hhhHhh--
Confidence 45999999999999999999 799999999999998887765432 5677777743 222 222222
Q ss_pred CCCCccccCCchhHHHHHHHHHHHHhcc
Q 014608 273 ESDGEVKSIDLGHEVVKLYLFYERWRRA 300 (421)
Q Consensus 273 ~~~~~~~~~~~~~evv~~~~~~e~w~~~ 300 (421)
-+|+.+..|.+++..+-.-|.+
T Consensus 573 ------~~f~~~n~~~~~~~i~p~~~~~ 594 (679)
T PRK01122 573 ------TTFSIANDVAKYFAIIPAMFAA 594 (679)
T ss_pred ------hhhhHHHHHHHHHHHHHHHHHh
Confidence 2456666776666655555543
No 145
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=97.33 E-value=0.0019 Score=72.22 Aligned_cols=124 Identities=19% Similarity=0.196 Sum_probs=84.4
Q ss_pred HHHHHHHHcCCcEEEEEcCCCHHHHHHHHHhCCCCCCCEEEEccCcEEEeCCccCCcccHHHHHhchhhhhHHHHHhhcC
Q 014608 35 NALWEAHYRRDSLLVFSTGRSPTLYKQLRKEKPMLTPDITIMSVGTEITYGDAMVPDNGWVEVLNQKWDKKIVTEEASRF 114 (421)
Q Consensus 35 ~al~~~l~~~g~~vviaTGRs~~~~~~l~~~~~~~~~d~~I~~nGa~I~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 114 (421)
+++. .|++.|+.+++.||-.+..+..+.+++++. .+ .++.+.. + .
T Consensus 557 ~aI~-~l~~aGI~v~miTGD~~~tA~~IA~~lGI~-~~--------~v~~G~e----------l-------------~-- 601 (902)
T PRK10517 557 PALK-ALKASGVTVKILTGDSELVAAKVCHEVGLD-AG--------EVLIGSD----------I-------------E-- 601 (902)
T ss_pred HHHH-HHHHCCCEEEEEcCCCHHHHHHHHHHcCCC-cc--------CceeHHH----------H-------------H--
Confidence 3444 788999999999999999999999999863 11 0111000 0 0
Q ss_pred CCCcccCCcCCCceEEEEEEcccchHHHHHHHHHHHHhcCCcEEEEEEcCeeEEEecCCCCHHHHHHHHHHHHhhCCCCC
Q 014608 115 PELKLQSETEQRPHKVSFYVDKDKAQTVTQKLSEIFKNRGLDVKIIYSGGMDLDILPQGAGKGQALAYLLRKFKCEGKVP 194 (421)
Q Consensus 115 ~~l~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~s~~~~ldI~p~g~sKg~al~~L~~~l~~~gi~~ 194 (421)
.+ + . +++.+.+++ .. .+-.+.|.. |..-++.|.++ |
T Consensus 602 -~l-----------------~---~----~el~~~~~~----~~------VfAr~sPe~--K~~IV~~Lq~~----G--- 637 (902)
T PRK10517 602 -TL-----------------S---D----DELANLAER----TT------LFARLTPMH--KERIVTLLKRE----G--- 637 (902)
T ss_pred -hC-----------------C---H----HHHHHHHhh----Cc------EEEEcCHHH--HHHHHHHHHHC----C---
Confidence 00 0 0 123333322 22 233566753 87777776542 3
Q ss_pred CcEEEEcCCcCchhhhcCCCceEEEecCChHHHHHHHHhhcCCC
Q 014608 195 TNTLVCGDSGNDAELFSIPEVYGVMVSNAQEELLQWHAANAKNN 238 (421)
Q Consensus 195 ~~vl~~GDs~NDi~M~~~agv~gvav~NA~~elk~~a~~v~~~~ 238 (421)
.-|.++||+.||.++++.|+ .||||+++.+..|+.|+.+..++
T Consensus 638 ~vVam~GDGvNDaPALk~AD-VGIAmg~gtdvAkeaADiVLldd 680 (902)
T PRK10517 638 HVVGFMGDGINDAPALRAAD-IGISVDGAVDIAREAADIILLEK 680 (902)
T ss_pred CEEEEECCCcchHHHHHhCC-EEEEeCCcCHHHHHhCCEEEecC
Confidence 57999999999999999999 79999999999999888776543
No 146
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=97.31 E-value=0.001 Score=74.50 Aligned_cols=60 Identities=18% Similarity=0.222 Sum_probs=44.3
Q ss_pred EEecCCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEec-CChHHHHHHHHhhcCC
Q 014608 168 DILPQGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMVS-NAQEELLQWHAANAKN 237 (421)
Q Consensus 168 dI~p~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav~-NA~~elk~~a~~v~~~ 237 (421)
...|.. |..-++.+.+ . | +.++++||+.||.++++.|+ .||+|+ ++.+..++.|+.+..+
T Consensus 600 r~~P~~--K~~iv~~lq~-~---g---~~v~mvGDGvND~pAl~~Ad-VGia~g~~g~~va~~aaDivl~d 660 (884)
T TIGR01522 600 RASPEH--KMKIVKALQK-R---G---DVVAMTGDGVNDAPALKLAD-IGVAMGQTGTDVAKEAADMILTD 660 (884)
T ss_pred ECCHHH--HHHHHHHHHH-C---C---CEEEEECCCcccHHHHHhCC-eeEecCCCcCHHHHHhcCEEEcC
Confidence 455543 6444444332 2 3 78999999999999999999 799998 5777788877777644
No 147
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=97.31 E-value=0.0017 Score=72.57 Aligned_cols=125 Identities=18% Similarity=0.198 Sum_probs=85.2
Q ss_pred HHHHHHHHHcCCcEEEEEcCCCHHHHHHHHHhCCCCCCCEEEEccCcEEEeCCccCCcccHHHHHhchhhhhHHHHHhhc
Q 014608 34 FNALWEAHYRRDSLLVFSTGRSPTLYKQLRKEKPMLTPDITIMSVGTEITYGDAMVPDNGWVEVLNQKWDKKIVTEEASR 113 (421)
Q Consensus 34 ~~al~~~l~~~g~~vviaTGRs~~~~~~l~~~~~~~~~d~~I~~nGa~I~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 113 (421)
.+++. .|++.|+.+++.||=.+..+..+.+++++. .+ .+..+.. + .
T Consensus 556 ~~aI~-~l~~aGI~v~miTGD~~~tA~aIA~~lGI~-~~--------~vi~G~e----------l-------------~- 601 (903)
T PRK15122 556 APAIA-ALRENGVAVKVLTGDNPIVTAKICREVGLE-PG--------EPLLGTE----------I-------------E- 601 (903)
T ss_pred HHHHH-HHHHCCCeEEEECCCCHHHHHHHHHHcCCC-CC--------CccchHh----------h-------------h-
Confidence 34444 789999999999999999999999999863 11 0110000 0 0
Q ss_pred CCCCcccCCcCCCceEEEEEEcccchHHHHHHHHHHHHhcCCcEEEEEEcCeeEEEecCCCCHHHHHHHHHHHHhhCCCC
Q 014608 114 FPELKLQSETEQRPHKVSFYVDKDKAQTVTQKLSEIFKNRGLDVKIIYSGGMDLDILPQGAGKGQALAYLLRKFKCEGKV 193 (421)
Q Consensus 114 ~~~l~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~s~~~~ldI~p~g~sKg~al~~L~~~l~~~gi~ 193 (421)
.+ + . +++.+.+++ +. .+-.+.|.. |..-++.|.++ |
T Consensus 602 --~~-----------------~---~----~el~~~v~~----~~------VfAr~sPe~--K~~iV~~Lq~~----G-- 637 (903)
T PRK15122 602 --AM-----------------D---D----AALAREVEE----RT------VFAKLTPLQ--KSRVLKALQAN----G-- 637 (903)
T ss_pred --hC-----------------C---H----HHHHHHhhh----CC------EEEEeCHHH--HHHHHHHHHhC----C--
Confidence 00 0 0 122333321 22 234567754 77777777543 3
Q ss_pred CCcEEEEcCCcCchhhhcCCCceEEEecCChHHHHHHHHhhcCCC
Q 014608 194 PTNTLVCGDSGNDAELFSIPEVYGVMVSNAQEELLQWHAANAKNN 238 (421)
Q Consensus 194 ~~~vl~~GDs~NDi~M~~~agv~gvav~NA~~elk~~a~~v~~~~ 238 (421)
+-|.++||+.||.++++.|+ .||||+++.+-.|+.|+.+..++
T Consensus 638 -~vVamtGDGvNDaPALk~AD-VGIAmg~gtdvAkeaADiVLldd 680 (903)
T PRK15122 638 -HTVGFLGDGINDAPALRDAD-VGISVDSGADIAKESADIILLEK 680 (903)
T ss_pred -CEEEEECCCchhHHHHHhCC-EEEEeCcccHHHHHhcCEEEecC
Confidence 57999999999999999999 79999999999999998776543
No 148
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=97.31 E-value=0.00028 Score=79.17 Aligned_cols=44 Identities=16% Similarity=0.153 Sum_probs=39.4
Q ss_pred CCCcEEEEcCCcCchhhhcCCCceEEEecCChHHHHHHHHhhcCC
Q 014608 193 VPTNTLVCGDSGNDAELFSIPEVYGVMVSNAQEELLQWHAANAKN 237 (421)
Q Consensus 193 ~~~~vl~~GDs~NDi~M~~~agv~gvav~NA~~elk~~a~~v~~~ 237 (421)
..+.+.++||+.||.+|++.|+ .||+|+++.+..|+.|+++..+
T Consensus 629 ~g~~va~iGDG~ND~~alk~Ad-VGia~g~g~~~ak~aAD~vl~d 672 (917)
T TIGR01116 629 QGEIVAMTGDGVNDAPALKKAD-IGIAMGSGTEVAKEASDMVLAD 672 (917)
T ss_pred cCCeEEEecCCcchHHHHHhCC-eeEECCCCcHHHHHhcCeEEcc
Confidence 3467888999999999999999 7999999999999999888765
No 149
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=97.29 E-value=0.0014 Score=68.39 Aligned_cols=41 Identities=7% Similarity=-0.067 Sum_probs=31.9
Q ss_pred CCHHHHHHHHHHHHhh-CCCCCCcEEEEcCCcCchhhhcCCC
Q 014608 174 AGKGQALAYLLRKFKC-EGKVPTNTLVCGDSGNDAELFSIPE 214 (421)
Q Consensus 174 ~sKg~al~~L~~~l~~-~gi~~~~vl~~GDs~NDi~M~~~ag 214 (421)
..+...+.+++++++. .+++++++++|||+..|+...+.+|
T Consensus 263 KP~pGm~~~a~~~~~~~~~Id~~~S~~VGDaagr~~~g~~ag 304 (526)
T TIGR01663 263 KPLTGMWDHLKEEANDGTEIQEDDCFFVGDAAGRPANGKAAG 304 (526)
T ss_pred CCCHHHHHHHHHhcCcccCCCHHHeEEeCCcccchHHHHhcC
Confidence 4567788888888710 0289999999999999998876665
No 150
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=97.24 E-value=0.0014 Score=59.90 Aligned_cols=36 Identities=17% Similarity=0.303 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCC
Q 014608 176 KGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPE 214 (421)
Q Consensus 176 Kg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~ag 214 (421)
....+..+++.| +.++++|+++||+.||+.|++.||
T Consensus 180 ~~k~~~~~i~~l---~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 180 EPKIFLRIIKEL---QVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp HHHHHHHHHHHH---TCTGGGEEEEESSGGHHHHHHHSS
T ss_pred cchhHHHHHHHH---hcCCCEEEEEccCHHHHHHHHhCc
Confidence 444669999999 989999999999999999999876
No 151
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=97.21 E-value=0.0013 Score=70.70 Aligned_cols=54 Identities=17% Similarity=0.127 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEecCChHHHHHHHHhhcCC
Q 014608 176 KGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMVSNAQEELLQWHAANAKN 237 (421)
Q Consensus 176 Kg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav~NA~~elk~~a~~v~~~ 237 (421)
|-.-++.+.++ | +-+.++||+.||.+.++.++ .|+||+++.+..|+.|+.+.-+
T Consensus 492 K~~iV~~lQ~~----G---~~VaMtGDGvNDAPALa~AD-VGIAMgsGTdvAkeAADiVLld 545 (673)
T PRK14010 492 KINVIREEQAK----G---HIVAMTGDGTNDAPALAEAN-VGLAMNSGTMSAKEAANLIDLD 545 (673)
T ss_pred HHHHHHHHHhC----C---CEEEEECCChhhHHHHHhCC-EEEEeCCCCHHHHHhCCEEEcC
Confidence 66555555432 2 56899999999999999999 7999999999999988877644
No 152
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=97.19 E-value=0.0003 Score=64.22 Aligned_cols=48 Identities=31% Similarity=0.279 Sum_probs=43.1
Q ss_pred cCCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEecC
Q 014608 171 PQGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMVSN 222 (421)
Q Consensus 171 p~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav~N 222 (421)
..+..|..+++.++++. ++++++++++|||.+|++|++.+| .+++|..
T Consensus 151 ~~g~~K~~~l~~~~~~~---~~~~~~~~~~gDs~~D~~~~~~a~-~~~~v~~ 198 (202)
T TIGR01490 151 CKGEGKVHALAELLAEE---QIDLKDSYAYGDSISDLPLLSLVG-HPYVVNP 198 (202)
T ss_pred CCChHHHHHHHHHHHHc---CCCHHHcEeeeCCcccHHHHHhCC-CcEEeCC
Confidence 45678999999999999 999999999999999999999999 8888753
No 153
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=97.13 E-value=0.0007 Score=51.70 Aligned_cols=49 Identities=22% Similarity=0.342 Sum_probs=43.9
Q ss_pred CCCHHHHHHHHHHHHhhCCCCCCcEEEEcCC-cCchhhhcCCCceEEEecCCh
Q 014608 173 GAGKGQALAYLLRKFKCEGKVPTNTLVCGDS-GNDAELFSIPEVYGVMVSNAQ 224 (421)
Q Consensus 173 g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs-~NDi~M~~~agv~gvav~NA~ 224 (421)
+......+..+++.+ +++++++++|||+ ..|+.+.+.+|+.+|.|..+.
T Consensus 3 gKP~p~~~~~a~~~~---~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~ 52 (75)
T PF13242_consen 3 GKPSPGMLEQALKRL---GVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGV 52 (75)
T ss_dssp STTSHHHHHHHHHHH---TSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSS
T ss_pred CCCcHHHHHHHHHHc---CCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCC
Confidence 445678899999999 9999999999999 999999999999999987754
No 154
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=97.10 E-value=0.0092 Score=54.04 Aligned_cols=61 Identities=18% Similarity=0.073 Sum_probs=42.4
Q ss_pred CCccccCCCeEEEEeCCCCCCCCCCCCCccHHHHHHHHHHHHcCCcEEEEEcCCCHHHHHHHHHhCC
Q 014608 1 MDRLSAAARLMIVSDLDHTMVDHHDAENLSLLRFNALWEAHYRRDSLLVFSTGRSPTLYKQLRKEKP 67 (421)
Q Consensus 1 M~rl~~~~~klI~~DLDGTLl~~~~~~~~s~~~~~al~~~l~~~g~~vviaTGRs~~~~~~l~~~~~ 67 (421)
|.+++ ..+-+..||-|||-.+.....-+ .+|+. +|++++.++=++|--+-.+-..+.+++.
T Consensus 1 m~~~~--~v~gvLlDlSGtLh~e~~avpga---~eAl~-rLr~~~~kVkFvTNttk~Sk~~l~~rL~ 61 (262)
T KOG3040|consen 1 MSNGR--AVKGVLLDLSGTLHIEDAAVPGA---VEALK-RLRDQHVKVKFVTNTTKESKRNLHERLQ 61 (262)
T ss_pred CCccc--ccceEEEeccceEecccccCCCH---HHHHH-HHHhcCceEEEEecCcchhHHHHHHHHH
Confidence 44433 46889999999999888543333 45655 6788999998988776665555555443
No 155
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=97.08 E-value=0.0017 Score=70.19 Aligned_cols=73 Identities=16% Similarity=0.255 Sum_probs=59.5
Q ss_pred eEEEecCCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEecCChHHHHHHHHhhcCCCCceeecc
Q 014608 166 DLDILPQGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMVSNAQEELLQWHAANAKNNPKLTHAT 245 (421)
Q Consensus 166 ~ldI~p~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav~NA~~elk~~a~~v~~~~~~~~~~~ 245 (421)
.-+++|.+ |...++.|.++- ..++++||+.||.+.|..++ .||||+.+.+-.++.||.+.-.+
T Consensus 580 ~AellPed--K~~~V~~l~~~g-------~~VamVGDGINDAPALA~Ad-VGiAmG~GtDvA~eaADvvL~~~------- 642 (713)
T COG2217 580 RAELLPED--KAEIVRELQAEG-------RKVAMVGDGINDAPALAAAD-VGIAMGSGTDVAIEAADVVLMRD------- 642 (713)
T ss_pred eccCCcHH--HHHHHHHHHhcC-------CEEEEEeCCchhHHHHhhcC-eeEeecCCcHHHHHhCCEEEecC-------
Confidence 45677864 888888887543 68999999999999999999 79999999999999888766543
Q ss_pred CCCccHHHHHHH
Q 014608 246 ERCAAGIIQAIG 257 (421)
Q Consensus 246 ~~~~~GV~~~l~ 257 (421)
+-..|.++|+
T Consensus 643 --dL~~v~~ai~ 652 (713)
T COG2217 643 --DLSAVPEAID 652 (713)
T ss_pred --CHHHHHHHHH
Confidence 2567777764
No 156
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=97.06 E-value=0.0016 Score=71.36 Aligned_cols=59 Identities=22% Similarity=0.298 Sum_probs=47.3
Q ss_pred EEecCCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEecCChHHHHHHHHhhcCC
Q 014608 168 DILPQGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMVSNAQEELLQWHAANAKN 237 (421)
Q Consensus 168 dI~p~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav~NA~~elk~~a~~v~~~ 237 (421)
+..|. +|...++.+.+ ...++++||+.||.++++.++ .||+|+++.+..++.|+.+...
T Consensus 612 ~~~p~--~K~~~v~~l~~--------~~~v~mvGDgiNDapAl~~A~-vgia~g~~~~~a~~~adivl~~ 670 (741)
T PRK11033 612 GLLPE--DKVKAVTELNQ--------HAPLAMVGDGINDAPAMKAAS-IGIAMGSGTDVALETADAALTH 670 (741)
T ss_pred CCCHH--HHHHHHHHHhc--------CCCEEEEECCHHhHHHHHhCC-eeEEecCCCHHHHHhCCEEEec
Confidence 34554 68887766532 257999999999999999999 8999999999999987766544
No 157
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=97.05 E-value=0.0043 Score=69.58 Aligned_cols=61 Identities=15% Similarity=0.211 Sum_probs=45.8
Q ss_pred EEEecCCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEec-CChHHHHHHHHhhcCC
Q 014608 167 LDILPQGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMVS-NAQEELLQWHAANAKN 237 (421)
Q Consensus 167 ldI~p~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav~-NA~~elk~~a~~v~~~ 237 (421)
-.+.|.. |..-++.|.++ -.-|.++||+.||.+|++.|+ .||+|+ ++.+..|++|+.+..+
T Consensus 620 ARvsP~q--K~~IV~~lq~~-------g~vVamtGDGvNDapALk~AD-VGIamg~~Gtdaak~Aadivl~d 681 (917)
T COG0474 620 ARVSPEQ--KARIVEALQKS-------GHVVAMTGDGVNDAPALKAAD-VGIAMGGEGTDAAKEAADIVLLD 681 (917)
T ss_pred EEcCHHH--HHHHHHHHHhC-------CCEEEEeCCCchhHHHHHhcC-ccEEecccHHHHHHhhcceEeec
Confidence 3555643 55555554442 267999999999999999999 799888 5899999988766544
No 158
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=97.02 E-value=0.0016 Score=62.49 Aligned_cols=38 Identities=24% Similarity=0.212 Sum_probs=32.5
Q ss_pred CCCHHHHHH-HHHHHHhhCC--CCCCcEEEEcCCcCchhhhcCC
Q 014608 173 GAGKGQALA-YLLRKFKCEG--KVPTNTLVCGDSGNDAELFSIP 213 (421)
Q Consensus 173 g~sKg~al~-~L~~~l~~~g--i~~~~vl~~GDs~NDi~M~~~a 213 (421)
..+|...+. ..++.+ + +++++|+++|||.||+.|...+
T Consensus 190 ~~~K~~~v~~~~~~~~---~~~~~~~~vI~vGDs~~Dl~ma~g~ 230 (277)
T TIGR01544 190 TFNKNHDVALRNTEYF---NQLKDRSNIILLGDSQGDLRMADGV 230 (277)
T ss_pred ccccHHHHHHHHHHHh---CccCCcceEEEECcChhhhhHhcCC
Confidence 467887776 578888 7 8999999999999999998865
No 159
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=96.98 E-value=0.0044 Score=70.63 Aligned_cols=59 Identities=20% Similarity=0.298 Sum_probs=44.0
Q ss_pred eEEEecCCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEecCChHHHHHHHHhhcC
Q 014608 166 DLDILPQGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMVSNAQEELLQWHAANAK 236 (421)
Q Consensus 166 ~ldI~p~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav~NA~~elk~~a~~v~~ 236 (421)
+-.+.|.. |..-++.|.+ . | .-|.++||+.||.++++.|+ .||+|++++ +..+|+.+..
T Consensus 782 fAR~sP~q--K~~iV~~lq~-~---g---~~V~m~GDG~ND~~ALK~Ad-VGIam~~~d--as~AA~f~l~ 840 (1054)
T TIGR01657 782 FARMAPDQ--KETLVELLQK-L---D---YTVGMCGDGANDCGALKQAD-VGISLSEAE--ASVAAPFTSK 840 (1054)
T ss_pred EEecCHHH--HHHHHHHHHh-C---C---CeEEEEeCChHHHHHHHhcC-cceeecccc--ceeecccccC
Confidence 34667764 7777776654 3 4 57999999999999999999 799999884 3344555544
No 160
>PTZ00445 p36-lilke protein; Provisional
Probab=96.91 E-value=0.0052 Score=56.16 Aligned_cols=53 Identities=17% Similarity=0.137 Sum_probs=47.4
Q ss_pred EecCCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEecCCh
Q 014608 169 ILPQGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMVSNAQ 224 (421)
Q Consensus 169 I~p~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav~NA~ 224 (421)
+-|....|..=++.+++++ |++|+++++|=|+..-++..+..|+.++.+.++.
T Consensus 156 ~KPdp~iK~yHle~ll~~~---gl~peE~LFIDD~~~NVeaA~~lGi~ai~f~~~e 208 (219)
T PTZ00445 156 DAPMPLDKSYHLKQVCSDF---NVNPDEILFIDDDMNNCKNALKEGYIALHVTGNE 208 (219)
T ss_pred cCCCccchHHHHHHHHHHc---CCCHHHeEeecCCHHHHHHHHHCCCEEEEcCChH
Confidence 4566777888899999999 9999999999999999999999999999887764
No 161
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=96.91 E-value=0.008 Score=53.50 Aligned_cols=53 Identities=26% Similarity=0.299 Sum_probs=40.4
Q ss_pred eEEEecCCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEecCC
Q 014608 166 DLDILPQGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMVSNA 223 (421)
Q Consensus 166 ~ldI~p~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav~NA 223 (421)
+++|.|. +|-.-++.|.+.. |++.+++++|=|...-++-.+..||.++-+.|+
T Consensus 101 ~~eI~~g--sK~~Hf~~i~~~t---gI~y~eMlFFDDe~~N~~~v~~lGV~~v~v~~G 153 (169)
T PF12689_consen 101 YLEIYPG--SKTTHFRRIHRKT---GIPYEEMLFFDDESRNIEVVSKLGVTCVLVPDG 153 (169)
T ss_dssp EEEESSS---HHHHHHHHHHHH------GGGEEEEES-HHHHHHHHTTT-EEEE-SSS
T ss_pred hhheecC--chHHHHHHHHHhc---CCChhHEEEecCchhcceeeEecCcEEEEeCCC
Confidence 4788885 8999999999999 999999999999877777777799888988885
No 162
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=96.84 E-value=0.0023 Score=56.04 Aligned_cols=54 Identities=17% Similarity=0.214 Sum_probs=36.8
Q ss_pred EEEEeCCCCCCCCCC-----C---CCccHHHHHHHHHHHHcCCcEEEEEcCCCHHHHHHHHH
Q 014608 11 MIVSDLDHTMVDHHD-----A---ENLSLLRFNALWEAHYRRDSLLVFSTGRSPTLYKQLRK 64 (421)
Q Consensus 11 lI~~DLDGTLl~~~~-----~---~~~s~~~~~al~~~l~~~g~~vviaTGRs~~~~~~l~~ 64 (421)
+|+||+|||++.++- + ....-.....+...++++|++++..|+|+.......+.
T Consensus 1 VVvsDIDGTiT~SD~~G~i~~~~G~d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~ 62 (157)
T PF08235_consen 1 VVVSDIDGTITKSDVLGHILPILGKDWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRS 62 (157)
T ss_pred CEEEeccCCcCccchhhhhhhccCchhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHH
Confidence 489999999999851 0 01111223345557789999999999999876554443
No 163
>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway.; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process
Probab=96.71 E-value=0.034 Score=54.86 Aligned_cols=212 Identities=18% Similarity=0.236 Sum_probs=110.4
Q ss_pred CCeEEEEeCCCCCCCCCCCCCccHHHHHHHHHHHHcCCcEEEEEcCCCHHHHHHHHHh-------CC---CCCC----CE
Q 014608 8 ARLMIVSDLDHTMVDHHDAENLSLLRFNALWEAHYRRDSLLVFSTGRSPTLYKQLRKE-------KP---MLTP----DI 73 (421)
Q Consensus 8 ~~klI~~DLDGTLl~~~~~~~~s~~~~~al~~~l~~~g~~vviaTGRs~~~~~~l~~~-------~~---~~~~----d~ 73 (421)
.-+||-||=|+||.+++.....+...+..|. +|-++|+.+.|+|.-.+.....+.+. +. -.++ ..
T Consensus 146 ~L~LvTFDgDvTLY~DG~sl~~d~pvi~~ii-~LL~~gv~VgIVTAAGY~~a~kY~~RL~GLL~a~~~~~~Lt~~qk~~l 224 (408)
T PF06437_consen 146 GLKLVTFDGDVTLYEDGASLEPDNPVIPRII-KLLRRGVKVGIVTAAGYPGAEKYEERLHGLLDAFKDSTDLTPEQKSNL 224 (408)
T ss_pred CceEEEEcCCcccccCCCCCCCCchHHHHHH-HHHhcCCeEEEEeCCCCCChHHHHHHHHHHHHHHHhccCCCHHHhcCE
Confidence 5699999999999999876544445566777 45689999999996555433332221 11 1111 23
Q ss_pred EEEccCc-EEE-eCCc------cCCcccHHHHHhchhhhhHHHHH-----------hhcCCCCcccCCcCCCceEEEEE-
Q 014608 74 TIMSVGT-EIT-YGDA------MVPDNGWVEVLNQKWDKKIVTEE-----------ASRFPELKLQSETEQRPHKVSFY- 133 (421)
Q Consensus 74 ~I~~nGa-~I~-~~~~------~~~~~~~~~~l~~~~~~~~~~~~-----------~~~~~~l~~~~~~~~~~~ki~~~- 133 (421)
+|+.--+ +++ ++.. .++...|.-.--..|...-+.+. ...+ +++..-.-+.+...+.-.
T Consensus 225 ~VMGGEsNYLfr~~~~~~~~L~~v~~~~W~~~~m~~W~~~dI~~lLD~AE~~L~~~~~~l-~Lpa~IiRK~RAVGivP~~ 303 (408)
T PF06437_consen 225 YVMGGESNYLFRYDPESPHGLEFVPREEWLLPEMKTWSEEDITELLDIAEAALRDCVKRL-NLPATIIRKERAVGIVPKP 303 (408)
T ss_pred EEecccceeEEEecCCCCCCeEEccHHhccCccccCcCHHHHHHHHHHHHHHHHHHHHHc-CCCeeEEeecceeeEecCC
Confidence 4442111 111 1111 12333343222223443222111 1111 121111112222211110
Q ss_pred ---EcccchHHHHHHHHHHHHhcCCc--E-EEEEEcC--eeEEEecCCCCHHHHHHHHHHHHh-hCCCCCCcEEEEcC--
Q 014608 134 ---VDKDKAQTVTQKLSEIFKNRGLD--V-KIIYSGG--MDLDILPQGAGKGQALAYLLRKFK-CEGKVPTNTLVCGD-- 202 (421)
Q Consensus 134 ---~~~~~~~~~~~~l~~~l~~~~~~--~-~v~~s~~--~~ldI~p~g~sKg~al~~L~~~l~-~~gi~~~~vl~~GD-- 202 (421)
...+..++..-.+++.+...... + -+.+.|| .++||- +|.-|++.+.+.|. ..+|.+.+|+.+||
T Consensus 304 ~~ki~rE~LEE~VL~vq~~L~~~~~~~~ipfCAFNGGsDVwVDIG----dKs~GV~~lQ~y~~~~~~i~~~~tLHVGDQF 379 (408)
T PF06437_consen 304 GVKIIREQLEEIVLTVQKTLEESPPGRRIPFCAFNGGSDVWVDIG----DKSLGVRALQKYFDPEGGIKPSETLHVGDQF 379 (408)
T ss_pred CCcchhhhHHHHHHHHHHHHHhcCCCCCCceeeecCCcceEEEcC----CcHHhHHHHHHHHHhccCCCccceeeehhhh
Confidence 01234455555566666543111 1 1345554 466664 59999999999881 13799999999999
Q ss_pred --Cc-CchhhhcCCCceEEEecCChHHH
Q 014608 203 --SG-NDAELFSIPEVYGVMVSNAQEEL 227 (421)
Q Consensus 203 --s~-NDi~M~~~agv~gvav~NA~~el 227 (421)
++ ||...=. ++ ..+=++|..+.+
T Consensus 380 ~s~GaNDfkaR~-a~-~t~WIasP~ETv 405 (408)
T PF06437_consen 380 LSAGANDFKARL-AC-TTAWIASPQETV 405 (408)
T ss_pred hccCCcchhhhh-hc-eeeEecCHHHHh
Confidence 34 9998654 44 345566766654
No 164
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=96.68 E-value=0.004 Score=50.55 Aligned_cols=53 Identities=26% Similarity=0.251 Sum_probs=35.5
Q ss_pred EEEeCCCCCCCCCCCCCccHHHHHHHHHHHHcCCcEEEEEcC---CCHHHHHHHHHhCCC
Q 014608 12 IVSDLDHTMVDHHDAENLSLLRFNALWEAHYRRDSLLVFSTG---RSPTLYKQLRKEKPM 68 (421)
Q Consensus 12 I~~DLDGTLl~~~~~~~~s~~~~~al~~~l~~~g~~vviaTG---Rs~~~~~~l~~~~~~ 68 (421)
++||+||||...+.+..-+ .+++. .++++|.++++.|- |++..+....+.+++
T Consensus 1 ~l~D~dGvl~~g~~~ipga---~e~l~-~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi 56 (101)
T PF13344_consen 1 FLFDLDGVLYNGNEPIPGA---VEALD-ALRERGKPVVFLTNNSSRSREEYAKKLKKLGI 56 (101)
T ss_dssp EEEESTTTSEETTEE-TTH---HHHHH-HHHHTTSEEEEEES-SSS-HHHHHHHHHHTTT
T ss_pred CEEeCccEeEeCCCcCcCH---HHHHH-HHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCc
Confidence 6899999999977554333 33333 67789999999994 444555555566665
No 165
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=96.59 E-value=0.011 Score=55.23 Aligned_cols=64 Identities=13% Similarity=0.040 Sum_probs=40.4
Q ss_pred cCCCeEEEEeCCCCCCCCCC----------CC-------------CccHHHHHHHHHHHHcCCcEEEEEcCCCHHH---H
Q 014608 6 AAARLMIVSDLDHTMVDHHD----------AE-------------NLSLLRFNALWEAHYRRDSLLVFSTGRSPTL---Y 59 (421)
Q Consensus 6 ~~~~klI~~DLDGTLl~~~~----------~~-------------~~s~~~~~al~~~l~~~g~~vviaTGRs~~~---~ 59 (421)
+-.+..++||+|.|++++.+ .. .........+.+.++++|+.++++|||+... .
T Consensus 74 ~dg~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T 153 (229)
T TIGR01675 74 GDGMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNAT 153 (229)
T ss_pred CCCCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHH
Confidence 33568999999999998541 00 1111122234446789999999999999655 3
Q ss_pred HHHHHhCCCC
Q 014608 60 KQLRKEKPML 69 (421)
Q Consensus 60 ~~l~~~~~~~ 69 (421)
..-+...+..
T Consensus 154 ~~nL~~~G~~ 163 (229)
T TIGR01675 154 LDNLINAGFT 163 (229)
T ss_pred HHHHHHcCCC
Confidence 3333445543
No 166
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=96.37 E-value=0.019 Score=65.67 Aligned_cols=62 Identities=19% Similarity=0.277 Sum_probs=48.0
Q ss_pred eEEEecCCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEecCChH-HHHHHHHhhcC
Q 014608 166 DLDILPQGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMVSNAQE-ELLQWHAANAK 236 (421)
Q Consensus 166 ~ldI~p~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav~NA~~-elk~~a~~v~~ 236 (421)
+..+.|. .|+.-++.+.+.. | .-|+++||+.||.+|++.|+ .||.+..... ..+..||++..
T Consensus 748 ~aR~sP~--qK~~IV~~lk~~~---~---~~vl~iGDG~ND~~mlk~Ad-VGIgi~g~eg~qA~~aaD~~i~ 810 (1057)
T TIGR01652 748 CCRVSPS--QKADVVRLVKKST---G---KTTLAIGDGANDVSMIQEAD-VGVGISGKEGMQAVMASDFAIG 810 (1057)
T ss_pred EeCCCHH--HHHHHHHHHHhcC---C---CeEEEEeCCCccHHHHhhcC-eeeEecChHHHHHHHhhhhhhh
Confidence 3466776 4888888887664 3 57999999999999999999 7998866554 46677777654
No 167
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=96.26 E-value=0.0064 Score=50.99 Aligned_cols=52 Identities=21% Similarity=0.293 Sum_probs=40.8
Q ss_pred HHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEe---cCChHHHHHHHHhhcC
Q 014608 181 AYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMV---SNAQEELLQWHAANAK 236 (421)
Q Consensus 181 ~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav---~NA~~elk~~a~~v~~ 236 (421)
..+...| +.+.+.|+++||+.||+.|++.++ .|||+ .++++.+...|+.+.+
T Consensus 83 ~~ii~eL---kk~~~k~vmVGnGaND~laLr~AD-lGI~tiq~e~v~~r~l~~ADvvik 137 (152)
T COG4087 83 AKIIREL---KKRYEKVVMVGNGANDILALREAD-LGICTIQQEGVPERLLLTADVVLK 137 (152)
T ss_pred HHHHHHh---cCCCcEEEEecCCcchHHHhhhcc-cceEEeccCCcchHHHhhchhhhh
Confidence 4455556 556689999999999999999999 78774 5677887777776654
No 168
>TIGR02246 conserved hypothetical protein. This family consists of uncharacterized proteins found in a number of genera and species, including Streptomyces, Xanthomonas, Oceanobacillus iheyensis, Caulobacter crescentus CB15, and Xylella fastidiosa. The function is unknown.
Probab=96.22 E-value=0.097 Score=43.42 Aligned_cols=100 Identities=15% Similarity=0.098 Sum_probs=61.6
Q ss_pred HHHHHHhccCCCceEeC-CCCcccCHHHHHHHHHhhcCCCCCceEEEEEeeeEEeeeeCCeEEEEEeee-EEeCcce---
Q 014608 308 YLSSLKANCCPSGFCVP-PSGGEISLAEAINQFRKCYGDKQGKQFRVWVDRVLSTEIGPGTWLVKFHKW-ELSGEER--- 382 (421)
Q Consensus 308 ~~~~l~~~~~p~~~~v~-~~G~~~~~~~~~~~~~~~~g~~~g~~~~i~vd~~~~~~~~~~~~~v~~~~~-~~~~~~~--- 382 (421)
..+.|.+.|+|+.+++. +++......+..+.++......+. .-.+.++...+...+++.++|..... ...++..
T Consensus 21 D~~~~~~~~~~Da~~~~~~g~~~~G~~~i~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~A~~~~~~~~~~~~~~~~~~ 99 (128)
T TIGR02246 21 DAEGFADLFTPDGVFVTVPGQVWKGREAIAAAHEAFLAGPYK-GTRVTIDVIEVRFLGPDLAIVHAIQTITAPGKGRARP 99 (128)
T ss_pred CHHHHHHhhCCCceEECCCCCeecCHHHHHHHHHHHhcccCC-CcEEEeeeEEEEecCCCEEEEEEEEEEEcCCCCCCCC
Confidence 35567788999999994 445567788999999887776542 12344444444445778888765542 2223222
Q ss_pred -eeEEEEEEEEEeCCCCeeEEEeeeecc
Q 014608 383 -ACSIVSIIVRIKDASDHTYMHVHETWL 409 (421)
Q Consensus 383 -~~~~~t~~~~~~~~~~~~w~h~het~~ 409 (421)
..-+.|.++.+ .+++++-.|.|-|..
T Consensus 100 ~~~~~~t~~~~~-~~g~W~I~~~h~s~~ 126 (128)
T TIGR02246 100 DAAVRLTFVAVK-RDGRWLLAADHNTPV 126 (128)
T ss_pred CcceEEEEEEEe-eCCeEEEEeccCCCC
Confidence 13455666655 467666666666543
No 169
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=95.94 E-value=0.023 Score=52.86 Aligned_cols=46 Identities=13% Similarity=0.092 Sum_probs=41.4
Q ss_pred CCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEec
Q 014608 173 GAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMVS 221 (421)
Q Consensus 173 g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav~ 221 (421)
...+......+++++ |+++++++++||+..|+.+.+.+|+..+.+.
T Consensus 151 ~KP~p~~y~~i~~~l---gv~p~e~lfVgDs~~Di~AA~~AG~~ti~v~ 196 (220)
T TIGR01691 151 LKTEAQSYVKIAGQL---GSPPREILFLSDIINELDAARKAGLHTGQLV 196 (220)
T ss_pred cCCCHHHHHHHHHHh---CcChhHEEEEeCCHHHHHHHHHcCCEEEEEE
Confidence 466889999999999 9999999999999999999999997776653
No 170
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=95.84 E-value=0.0091 Score=52.68 Aligned_cols=44 Identities=18% Similarity=0.200 Sum_probs=25.7
Q ss_pred eEEEEeCCCCCCCCCCCC-------C---ccHHHHHHHHHHHHcCCcEEEEEcCC
Q 014608 10 LMIVSDLDHTMVDHHDAE-------N---LSLLRFNALWEAHYRRDSLLVFSTGR 54 (421)
Q Consensus 10 klI~~DLDGTLl~~~~~~-------~---~s~~~~~al~~~l~~~g~~vviaTGR 54 (421)
|+++||+||||+...... . ......++|. .+.+.|+.++|+|--
T Consensus 1 Kia~fD~DgTLi~~~s~~~f~~~~~D~~~~~~~v~~~L~-~l~~~Gy~IvIvTNQ 54 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKSGKKFPKDPDDWKFFPPGVPEALR-ELHKKGYKIVIVTNQ 54 (159)
T ss_dssp SEEEE-SCTTTEE-STSTTS-SSTCGGEEC-TTHHHHHH-HHHHTTEEEEEEEE-
T ss_pred CEEEEeCCCCccCCCCCCcCcCCHHHhhhcchhHHHHHH-HHHhcCCeEEEEeCc
Confidence 689999999998764211 1 1112345555 467788888887743
No 171
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=95.79 E-value=0.052 Score=51.97 Aligned_cols=62 Identities=16% Similarity=0.111 Sum_probs=40.1
Q ss_pred CCeEEEEeCCCCCCCCCC----------CC-------------CccHHHHHHHHHHHHcCCcEEEEEcCCCHHH---HHH
Q 014608 8 ARLMIVSDLDHTMVDHHD----------AE-------------NLSLLRFNALWEAHYRRDSLLVFSTGRSPTL---YKQ 61 (421)
Q Consensus 8 ~~klI~~DLDGTLl~~~~----------~~-------------~~s~~~~~al~~~l~~~g~~vviaTGRs~~~---~~~ 61 (421)
++..|+||||+|++++.+ +. .........+++.+.++|+.++++|+|+... ...
T Consensus 74 kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~ 153 (266)
T TIGR01533 74 KKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLK 153 (266)
T ss_pred CCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHH
Confidence 467999999999987651 11 0011112345556788999999999998443 334
Q ss_pred HHHhCCCC
Q 014608 62 LRKEKPML 69 (421)
Q Consensus 62 l~~~~~~~ 69 (421)
.++.+++.
T Consensus 154 ~Lkk~Gi~ 161 (266)
T TIGR01533 154 NLKRFGFP 161 (266)
T ss_pred HHHHcCcC
Confidence 55566664
No 172
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=95.78 E-value=0.072 Score=47.46 Aligned_cols=42 Identities=19% Similarity=0.222 Sum_probs=35.7
Q ss_pred ecCCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEE
Q 014608 170 LPQGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVM 219 (421)
Q Consensus 170 ~p~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gva 219 (421)
-+-|.+|+..+..+.+.. +-+++||||..|++..+..+ +-+|
T Consensus 142 s~fG~dK~~vI~~l~e~~-------e~~fy~GDsvsDlsaaklsD-llFA 183 (220)
T COG4359 142 SQFGHDKSSVIHELSEPN-------ESIFYCGDSVSDLSAAKLSD-LLFA 183 (220)
T ss_pred cccCCCcchhHHHhhcCC-------ceEEEecCCcccccHhhhhh-hHhh
Confidence 366899999999988755 66999999999999999988 5555
No 173
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=95.71 E-value=0.011 Score=51.72 Aligned_cols=47 Identities=26% Similarity=0.274 Sum_probs=41.4
Q ss_pred cCCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEe
Q 014608 171 PQGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMV 220 (421)
Q Consensus 171 p~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav 220 (421)
+...++..+.+.+++++ |++|+++++|||+..|+.+.+.+|+.+|.+
T Consensus 130 ~~~Kp~~~~~~~~~~~~---~~~p~~~~~vgD~~~d~~~A~~~G~~~i~v 176 (176)
T PF13419_consen 130 GSRKPDPDAYRRALEKL---GIPPEEILFVGDSPSDVEAAKEAGIKTIWV 176 (176)
T ss_dssp SSSTTSHHHHHHHHHHH---TSSGGGEEEEESSHHHHHHHHHTTSEEEEE
T ss_pred hhhhhHHHHHHHHHHHc---CCCcceEEEEeCCHHHHHHHHHcCCeEEeC
Confidence 33566789999999999 999999999999999999999999776653
No 174
>PLN03190 aminophospholipid translocase; Provisional
Probab=95.70 E-value=0.17 Score=58.22 Aligned_cols=60 Identities=20% Similarity=0.288 Sum_probs=42.3
Q ss_pred EEEecCCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEecCChH-HHHHHHHhhc
Q 014608 167 LDILPQGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMVSNAQE-ELLQWHAANA 235 (421)
Q Consensus 167 ldI~p~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav~NA~~-elk~~a~~v~ 235 (421)
..+.|. -|+.-++.+.+.. + .-|+++||+.||++|++.|+ .||.+..... .....||+.+
T Consensus 852 cR~sP~--QKa~IV~~vk~~~---~---~vtlaIGDGaNDv~mIq~Ad-VGIGIsG~EG~qA~~aSDfaI 912 (1178)
T PLN03190 852 CRVAPL--QKAGIVALVKNRT---S---DMTLAIGDGANDVSMIQMAD-VGVGISGQEGRQAVMASDFAM 912 (1178)
T ss_pred ecCCHH--HHHHHHHHHHhcC---C---cEEEEECCCcchHHHHHhcC-eeeeecCchhHHHHHhhccch
Confidence 467776 4888777776554 2 46999999999999999999 6987654431 3444455543
No 175
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=95.54 E-value=0.054 Score=58.94 Aligned_cols=73 Identities=16% Similarity=0.226 Sum_probs=57.0
Q ss_pred eEEEecCCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEecCChHHHHHHHHhhcCCCCceeecc
Q 014608 166 DLDILPQGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMVSNAQEELLQWHAANAKNNPKLTHAT 245 (421)
Q Consensus 166 ~ldI~p~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav~NA~~elk~~a~~v~~~~~~~~~~~ 245 (421)
+-|++|.+ |..=++.|.+.= ..+.++||+.||-+.|..++ .|++|+.+.+-..+.|+.+.-.|+
T Consensus 766 ~aev~P~~--K~~~Ik~lq~~~-------~~VaMVGDGINDaPALA~Ad-VGIaig~gs~vAieaADIVLmrn~------ 829 (951)
T KOG0207|consen 766 YAEVLPEQ--KAEKIKEIQKNG-------GPVAMVGDGINDAPALAQAD-VGIAIGAGSDVAIEAADIVLMRND------ 829 (951)
T ss_pred EeccCchh--hHHHHHHHHhcC-------CcEEEEeCCCCccHHHHhhc-cceeeccccHHHHhhCCEEEEccc------
Confidence 45777764 777777776542 67999999999999999999 799999999988888887765442
Q ss_pred CCCccHHHHHHH
Q 014608 246 ERCAAGIIQAIG 257 (421)
Q Consensus 246 ~~~~~GV~~~l~ 257 (421)
-.+|..+|.
T Consensus 830 ---L~~v~~ai~ 838 (951)
T KOG0207|consen 830 ---LRDVPFAID 838 (951)
T ss_pred ---hhhhHHHHH
Confidence 456666664
No 176
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=95.43 E-value=0.018 Score=51.12 Aligned_cols=46 Identities=24% Similarity=0.296 Sum_probs=40.2
Q ss_pred CCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEe
Q 014608 172 QGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMV 220 (421)
Q Consensus 172 ~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav 220 (421)
.+.++....+.+++++ |++++++++|||+..|+.+.+.+|+.+|.|
T Consensus 138 ~~KP~~~~~~~~~~~~---~~~~~~~~~vgD~~~di~aA~~~G~~~i~v 183 (183)
T TIGR01509 138 RGKPDPDIYLLALKKL---GLKPEECLFVDDSPAGIEAAKAAGMHTVLV 183 (183)
T ss_pred CCCCCHHHHHHHHHHc---CCCcceEEEEcCCHHHHHHHHHcCCEEEeC
Confidence 4455688999999999 999999999999999999999999766653
No 177
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=95.35 E-value=0.15 Score=55.14 Aligned_cols=40 Identities=23% Similarity=0.151 Sum_probs=31.9
Q ss_pred CcEEEEcCCcCchhhhcCCCceEEEecCCh-HHHHHHHHhhc
Q 014608 195 TNTLVCGDSGNDAELFSIPEVYGVMVSNAQ-EELLQWHAANA 235 (421)
Q Consensus 195 ~~vl~~GDs~NDi~M~~~agv~gvav~NA~-~elk~~a~~v~ 235 (421)
+-+.+.||+-||-++++.++ .|||||=|- +..|++||-+.
T Consensus 706 aiVaVTGDGVNDsPALKKAD-IGVAMGiaGSDvsKqAADmIL 746 (1019)
T KOG0203|consen 706 AIVAVTGDGVNDSPALKKAD-IGVAMGIAGSDVSKQAADMIL 746 (1019)
T ss_pred cEEEEeCCCcCCChhhcccc-cceeeccccchHHHhhcceEE
Confidence 56888999999999999999 799998774 45556555443
No 178
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=95.18 E-value=0.027 Score=60.59 Aligned_cols=77 Identities=17% Similarity=0.144 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEec-CChHHHHHHHHhhcC-CCCceeeccCCCccHHH
Q 014608 176 KGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMVS-NAQEELLQWHAANAK-NNPKLTHATERCAAGII 253 (421)
Q Consensus 176 Kg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav~-NA~~elk~~a~~v~~-~~~~~~~~~~~~~~GV~ 253 (421)
|-.-++.|.+. -+-+.+-||+-||.+.|+.++ .||||| |+.+-.|++++-|.. +|-..+++-=-+..||+
T Consensus 666 K~kIVeaLq~~-------geivAMTGDGVNDApALK~Ad-IGIAMG~~GTdVaKeAsDMVL~DDnFstIvaAVEEGr~Iy 737 (972)
T KOG0202|consen 666 KLKIVEALQSR-------GEVVAMTGDGVNDAPALKKAD-IGIAMGISGTDVAKEASDMVLADDNFSTIVAAVEEGRAIY 737 (972)
T ss_pred HHHHHHHHHhc-------CCEEEecCCCccchhhhhhcc-cceeecCCccHhhHhhhhcEEecCcHHHHHHHHHHhHHHH
Confidence 55555555443 267899999999999999999 899999 999999998887654 33211211111345677
Q ss_pred HHHHHhh
Q 014608 254 QAIGHFK 260 (421)
Q Consensus 254 ~~l~~~~ 260 (421)
.=|+.|.
T Consensus 738 nNik~Fi 744 (972)
T KOG0202|consen 738 NNIKNFI 744 (972)
T ss_pred HHHHHHH
Confidence 6666653
No 179
>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]
Probab=95.17 E-value=0.023 Score=59.40 Aligned_cols=77 Identities=13% Similarity=0.146 Sum_probs=50.6
Q ss_pred CCeEEEEeCCCCCCCCCC--------CCCccHHHHHHHHHHHHcCCcEEEEEcCCCHHHHHHHHHhCCCCCCCEEEEccC
Q 014608 8 ARLMIVSDLDHTMVDHHD--------AENLSLLRFNALWEAHYRRDSLLVFSTGRSPTLYKQLRKEKPMLTPDITIMSVG 79 (421)
Q Consensus 8 ~~klI~~DLDGTLl~~~~--------~~~~s~~~~~al~~~l~~~g~~vviaTGRs~~~~~~l~~~~~~~~~d~~I~~nG 79 (421)
+-++|++|+|||++.++- .....-..+..|.-+..+.|++++++|.|+...+.--+..+.-..-|+...-+|
T Consensus 529 n~kIVISDIDGTITKSDvLGh~lp~iGkDWTh~GVAkLyt~Ik~NGYk~lyLSARaIgQA~~TR~yL~nv~QdG~~LPdG 608 (738)
T KOG2116|consen 529 NDKIVISDIDGTITKSDVLGHVLPMIGKDWTHTGVAKLYTKIKENGYKILYLSARAIGQADSTRQYLKNVEQDGKKLPDG 608 (738)
T ss_pred CCcEEEecCCCceEhhhhhhhhhhhhcCcchhhhHHHHHHHHHhCCeeEEEEehhhhhhhHHHHHHHHHHhhcCccCCCC
Confidence 568999999999998871 122333446667767789999999999999876543333332222344444455
Q ss_pred cEEEe
Q 014608 80 TEITY 84 (421)
Q Consensus 80 a~I~~ 84 (421)
-+|+-
T Consensus 609 PViLS 613 (738)
T KOG2116|consen 609 PVILS 613 (738)
T ss_pred CEEeC
Confidence 55553
No 180
>PLN02811 hydrolase
Probab=95.11 E-value=0.028 Score=52.12 Aligned_cols=51 Identities=24% Similarity=0.245 Sum_probs=44.6
Q ss_pred cCCCCHHHHHHHHHHHHhhCC---CCCCcEEEEcCCcCchhhhcCCCceEEEecCCh
Q 014608 171 PQGAGKGQALAYLLRKFKCEG---KVPTNTLVCGDSGNDAELFSIPEVYGVMVSNAQ 224 (421)
Q Consensus 171 p~g~sKg~al~~L~~~l~~~g---i~~~~vl~~GDs~NDi~M~~~agv~gvav~NA~ 224 (421)
..+..+...+...++++ | +++++|++|||+..|+.+.+.+|+..|.+.+..
T Consensus 134 ~~~KP~p~~~~~a~~~~---~~~~~~~~~~v~IgDs~~di~aA~~aG~~~i~v~~~~ 187 (220)
T PLN02811 134 KQGKPAPDIFLAAARRF---EDGPVDPGKVLVFEDAPSGVEAAKNAGMSVVMVPDPR 187 (220)
T ss_pred cCCCCCcHHHHHHHHHh---CCCCCCccceEEEeccHhhHHHHHHCCCeEEEEeCCC
Confidence 34566888999999999 6 999999999999999999999998888886643
No 181
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=95.11 E-value=0.085 Score=47.18 Aligned_cols=36 Identities=31% Similarity=0.358 Sum_probs=28.4
Q ss_pred CHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhc
Q 014608 175 GKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFS 211 (421)
Q Consensus 175 sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~ 211 (421)
+|..+++.+...... +++...++++|||.||++|++
T Consensus 157 ~K~~~l~~~~~~~~~-~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 157 GKAEALKELYIRDEE-DIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHHH-THTCCEEEEEESSGGGHHHHH
T ss_pred cHHHHHHHHHHHhhc-CCCCCeEEEEECCHHHHHHhC
Confidence 699999999222211 457899999999999999985
No 182
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=94.69 E-value=0.14 Score=54.23 Aligned_cols=75 Identities=19% Similarity=0.310 Sum_probs=46.7
Q ss_pred EEEcccchHHHHHHHHHHHHhcCCcEEEEEEcCeeEEEecCCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhc
Q 014608 132 FYVDKDKAQTVTQKLSEIFKNRGLDVKIIYSGGMDLDILPQGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFS 211 (421)
Q Consensus 132 ~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~s~~~~ldI~p~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~ 211 (421)
+..+.+..+-.++...+.+-+...++..+ .+....|.. |++-++.|.++- | ..+.++||++||++|++
T Consensus 731 Lvi~G~Sl~~cl~yye~Ef~el~~~~~aV----v~CRctPtQ--KA~v~~llq~~t---~---krvc~IGDGGNDVsMIq 798 (1051)
T KOG0210|consen 731 LVIDGESLEFCLKYYEDEFIELVCELPAV----VCCRCTPTQ--KAQVVRLLQKKT---G---KRVCAIGDGGNDVSMIQ 798 (1051)
T ss_pred EEEcCchHHHHHHHHHHHHHHHHHhcCcE----EEEecChhH--HHHHHHHHHHhh---C---ceEEEEcCCCccchhee
Confidence 33344344444555555554422222222 223455654 888777777766 5 79999999999999999
Q ss_pred CCCceEEE
Q 014608 212 IPEVYGVM 219 (421)
Q Consensus 212 ~agv~gva 219 (421)
.|+ .||.
T Consensus 799 ~A~-~GiG 805 (1051)
T KOG0210|consen 799 AAD-VGIG 805 (1051)
T ss_pred ecc-ccee
Confidence 886 4554
No 183
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=94.29 E-value=0.072 Score=52.57 Aligned_cols=31 Identities=13% Similarity=0.043 Sum_probs=27.5
Q ss_pred CCCcEEEEcCCc-CchhhhcCCCceEEEecCC
Q 014608 193 VPTNTLVCGDSG-NDAELFSIPEVYGVMVSNA 223 (421)
Q Consensus 193 ~~~~vl~~GDs~-NDi~M~~~agv~gvav~NA 223 (421)
+++++++|||+. +|+.+.+.+|+.++.|...
T Consensus 262 ~~~~~~mIGD~~~tDI~ga~~~G~~silV~tG 293 (321)
T TIGR01456 262 PFHALYMVGDNPASDIIGAQNYGWFSCLVKTG 293 (321)
T ss_pred ChheEEEEcCChhhhhhhHHhCCceEEEeccc
Confidence 457999999996 9999999999989988764
No 184
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=94.28 E-value=0.016 Score=54.36 Aligned_cols=50 Identities=20% Similarity=0.276 Sum_probs=32.9
Q ss_pred CCeEEEEeCCCCCCCCCC-----------------------CCCccHHHHHHHHHHHHcCCcEEEEEcCCCHH
Q 014608 8 ARLMIVSDLDHTMVDHHD-----------------------AENLSLLRFNALWEAHYRRDSLLVFSTGRSPT 57 (421)
Q Consensus 8 ~~klI~~DLDGTLl~~~~-----------------------~~~~s~~~~~al~~~l~~~g~~vviaTGRs~~ 57 (421)
++..|+||||+|++++.. ....+......|.+.+.++|+.|+++|||+-.
T Consensus 71 ~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~~~~~aip~a~~l~~~~~~~G~~V~~iT~R~~~ 143 (229)
T PF03767_consen 71 KPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVASGKAPAIPGALELYNYARSRGVKVFFITGRPES 143 (229)
T ss_dssp SEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHCTGGEEETTHHHHHHHHHHTTEEEEEEEEEETT
T ss_pred CCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhcccCcccHHHHHHHHHHHHCCCeEEEEecCCch
Confidence 468999999999986421 00011111224555678899999999999843
No 185
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=94.09 E-value=0.3 Score=46.60 Aligned_cols=68 Identities=24% Similarity=0.261 Sum_probs=42.1
Q ss_pred CCeEEEEeCCCCCCCCCCCCCccH-HHHHHHHHHHHcCCcEEEE-EcCCCHHHHHHHHHhCCCC-CCCEEEEc
Q 014608 8 ARLMIVSDLDHTMVDHHDAENLSL-LRFNALWEAHYRRDSLLVF-STGRSPTLYKQLRKEKPML-TPDITIMS 77 (421)
Q Consensus 8 ~~klI~~DLDGTLl~~~~~~~~s~-~~~~al~~~l~~~g~~vvi-aTGRs~~~~~~l~~~~~~~-~~d~~I~~ 77 (421)
...+|+||||.||+.+..+..+.. ....+|. .|++.|..+++ +.|-+-... .-.+.+++. .+|.+||.
T Consensus 121 ~phVIVfDlD~TLItd~~~v~Ir~~~v~~sL~-~Lk~~g~vLvLWSyG~~eHV~-~sl~~~~L~~~Fd~ii~~ 191 (297)
T PF05152_consen 121 PPHVIVFDLDSTLITDEGDVRIRDPAVYDSLR-ELKEQGCVLVLWSYGNREHVR-HSLKELKLEGYFDIIICG 191 (297)
T ss_pred CCcEEEEECCCcccccCCccccCChHHHHHHH-HHHHcCCEEEEecCCCHHHHH-HHHHHhCCccccEEEEeC
Confidence 467999999999998876543322 2334555 68889966665 557664433 334444543 35665554
No 186
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=94.09 E-value=0.18 Score=44.83 Aligned_cols=23 Identities=17% Similarity=0.203 Sum_probs=19.7
Q ss_pred cccCCCeEEEEeCCCCCCCCCCC
Q 014608 4 LSAAARLMIVSDLDHTMVDHHDA 26 (421)
Q Consensus 4 l~~~~~klI~~DLDGTLl~~~~~ 26 (421)
|....+|.|+||+|.||+..+..
T Consensus 36 Lk~~Gik~li~DkDNTL~~~~~~ 58 (168)
T PF09419_consen 36 LKKKGIKALIFDKDNTLTPPYED 58 (168)
T ss_pred hhhcCceEEEEcCCCCCCCCCcC
Confidence 56778999999999999987754
No 187
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=94.03 E-value=0.14 Score=48.83 Aligned_cols=50 Identities=12% Similarity=0.103 Sum_probs=34.1
Q ss_pred CCeEEEEeCCCCCCCCC----------CCC--------------CccHHHHHHHHHHHHcCCcEEEEEcCCCHH
Q 014608 8 ARLMIVSDLDHTMVDHH----------DAE--------------NLSLLRFNALWEAHYRRDSLLVFSTGRSPT 57 (421)
Q Consensus 8 ~~klI~~DLDGTLl~~~----------~~~--------------~~s~~~~~al~~~l~~~g~~vviaTGRs~~ 57 (421)
...+++||+|+|++++- .+. .........+.+.+.++|+.++++|||+-.
T Consensus 100 ~~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~ 173 (275)
T TIGR01680 100 EKDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKLVSLGFKIIFLSGRLKD 173 (275)
T ss_pred CCCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHHHHCCCEEEEEeCCchh
Confidence 45799999999999532 010 011122335556778999999999999854
No 188
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=93.97 E-value=1.2 Score=41.35 Aligned_cols=51 Identities=18% Similarity=0.163 Sum_probs=43.8
Q ss_pred EecCCCCHHHHHHHHHHHHhhCCCCC-CcEEEEcCCcCchhhhcCCCceEEEecC
Q 014608 169 ILPQGAGKGQALAYLLRKFKCEGKVP-TNTLVCGDSGNDAELFSIPEVYGVMVSN 222 (421)
Q Consensus 169 I~p~g~sKg~al~~L~~~l~~~gi~~-~~vl~~GDs~NDi~M~~~agv~gvav~N 222 (421)
-++.|.+........++.+ |.++ +.|++|.|+.+-+.+.+.+|+..|++.+
T Consensus 146 ~v~~gKP~Pdi~l~A~~~l---~~~~~~k~lVfeds~~Gv~aa~aagm~vi~v~~ 197 (222)
T KOG2914|consen 146 EVKNGKPDPDIYLKAAKRL---GVPPPSKCLVFEDSPVGVQAAKAAGMQVVGVAT 197 (222)
T ss_pred cccCCCCCchHHHHHHHhc---CCCCccceEEECCCHHHHHHHHhcCCeEEEecC
Confidence 3455677888888888899 8888 9999999999999999999987788777
No 189
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=93.80 E-value=0.062 Score=50.35 Aligned_cols=52 Identities=21% Similarity=0.232 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHhhCCCCCCcEEEEcCC-cCchhhhcCCCceEEEecCChHHHHHH
Q 014608 176 KGQALAYLLRKFKCEGKVPTNTLVCGDS-GNDAELFSIPEVYGVMVSNAQEELLQW 230 (421)
Q Consensus 176 Kg~al~~L~~~l~~~gi~~~~vl~~GDs-~NDi~M~~~agv~gvav~NA~~elk~~ 230 (421)
-..--++.++++ |+.|++|+.+||+ .||++-.+.+|++++.|.|+...+++.
T Consensus 170 Dp~If~~al~~l---~v~Pee~vhIgD~l~nD~~gA~~~G~~ailv~~~~~~~~~~ 222 (237)
T KOG3085|consen 170 DPRIFQLALERL---GVKPEECVHIGDLLENDYEGARNLGWHAILVDNSITALKEL 222 (237)
T ss_pred ChHHHHHHHHHh---CCChHHeEEecCccccccHhHHHcCCEEEEEccccchhhhh
Confidence 456678999999 9999999999996 899999999999999999999888774
No 190
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=93.24 E-value=0.26 Score=50.29 Aligned_cols=64 Identities=19% Similarity=0.291 Sum_probs=47.2
Q ss_pred cccCCCeEEEEeCCCCCCCC----C--CCC-------CccHHHHHHHHHHHHcCCcEEEEEcCCCHHHHHHHHHhCC
Q 014608 4 LSAAARLMIVSDLDHTMVDH----H--DAE-------NLSLLRFNALWEAHYRRDSLLVFSTGRSPTLYKQLRKEKP 67 (421)
Q Consensus 4 l~~~~~klI~~DLDGTLl~~----~--~~~-------~~s~~~~~al~~~l~~~g~~vviaTGRs~~~~~~l~~~~~ 67 (421)
+++...|.++.|||+||... + ... ...-.+|+.....++++|+.+++||-.....++.+.+..+
T Consensus 217 ~~g~~kK~LVLDLDNTLWGGVIGedGv~GI~Ls~~~~G~~fk~fQ~~Ik~l~kqGVlLav~SKN~~~da~evF~khp 293 (574)
T COG3882 217 MSGKSKKALVLDLDNTLWGGVIGEDGVDGIRLSNSAEGEAFKTFQNFIKGLKKQGVLLAVCSKNTEKDAKEVFRKHP 293 (574)
T ss_pred hhCcccceEEEecCCcccccccccccccceeecCCCCchhHHHHHHHHHHHHhccEEEEEecCCchhhHHHHHhhCC
Confidence 45667899999999999642 1 111 1233467777778899999999999999888877776543
No 191
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=93.09 E-value=0.24 Score=51.95 Aligned_cols=49 Identities=20% Similarity=0.203 Sum_probs=35.5
Q ss_pred CHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEecCChHHHHHHHHhhcC
Q 014608 175 GKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMVSNAQEELLQWHAANAK 236 (421)
Q Consensus 175 sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav~NA~~elk~~a~~v~~ 236 (421)
.|..-++.+.+. | ..++++||+.||.+|++.++ .|++|+ .++.|+.+..
T Consensus 394 ~K~~~v~~l~~~----g---~~v~~vGDg~nD~~al~~Ad-vgia~~-----a~~~adivl~ 442 (499)
T TIGR01494 394 EKAALVEALQKK----G---RVVAMTGDGVNDAPALKKAD-VGIAMG-----AKAAADIVLL 442 (499)
T ss_pred HHHHHHHHHHHC----C---CEEEEECCChhhHHHHHhCC-Cccccc-----hHHhCCeEEe
Confidence 365555554321 3 67999999999999999999 799997 3555555443
No 192
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=92.88 E-value=0.09 Score=52.67 Aligned_cols=72 Identities=18% Similarity=0.181 Sum_probs=43.7
Q ss_pred CCCeEEEEeCCCCCCCCCCC--------CCccHHHHHHHHHHHHcCCcEEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcc
Q 014608 7 AARLMIVSDLDHTMVDHHDA--------ENLSLLRFNALWEAHYRRDSLLVFSTGRSPTLYKQLRKEKPMLTPDITIMSV 78 (421)
Q Consensus 7 ~~~klI~~DLDGTLl~~~~~--------~~~s~~~~~al~~~l~~~g~~vviaTGRs~~~~~~l~~~~~~~~~d~~I~~n 78 (421)
.+.++|+||+|||++.++-. ....-..+..|.-..-+.|+.+..-|.|++-.+..-+..+- -|+.|
T Consensus 373 ~n~kiVVsDiDGTITkSD~~Ghv~~miGkdwth~gVAkLYtdI~rNGYkI~YltsR~~Gqa~sTrsylr------nieQn 446 (580)
T COG5083 373 NNKKIVVSDIDGTITKSDALGHVKQMIGKDWTHNGVAKLYTDIDRNGYKIKYLTSRSYGQADSTRSYLR------NIEQN 446 (580)
T ss_pred CCCcEEEEecCCcEEehhhHHHHHHHhccchhhcchhhhhhhhccCceEEEEEecccccchhhhhhHHH------hhhhc
Confidence 35789999999999988721 11111223344434456899999999999765544333332 24555
Q ss_pred CcEEEe
Q 014608 79 GTEITY 84 (421)
Q Consensus 79 Ga~I~~ 84 (421)
|..+-+
T Consensus 447 gykLpd 452 (580)
T COG5083 447 GYKLPD 452 (580)
T ss_pred CccCCC
Confidence 554433
No 193
>PF12680 SnoaL_2: SnoaL-like domain; PDB: 3F40_A 3RGA_A 3G8Z_A 3DMC_A 3FH1_A 1TUH_A 3F14_A 3ER7_A 1Z1S_A 3F7X_A ....
Probab=92.74 E-value=1.7 Score=33.70 Aligned_cols=62 Identities=13% Similarity=0.148 Sum_probs=51.1
Q ss_pred HHHHHHhccCCCceEeCCCCcccCHHHHHHHHHhhcCCCCCceEEEEEeeeEEeeeeCCeEEEEEee
Q 014608 308 YLSSLKANCCPSGFCVPPSGGEISLAEAINQFRKCYGDKQGKQFRVWVDRVLSTEIGPGTWLVKFHK 374 (421)
Q Consensus 308 ~~~~l~~~~~p~~~~v~~~G~~~~~~~~~~~~~~~~g~~~g~~~~i~vd~~~~~~~~~~~~~v~~~~ 374 (421)
.++.+.+-++|+..+..|.|.....+++.+.++.....-+. +++.+.++ ...++.+++.+.-
T Consensus 12 d~~~i~~~~~~d~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~---~~~gd~v~~~~~~ 73 (102)
T PF12680_consen 12 DLDAIAALFAPDAVFHDPGGTLRGREAIREFFEEFFESFPD--IRFEIHDI---FADGDRVVVEWTV 73 (102)
T ss_dssp HHHHHHHTEEEEEEEEETTSEEESHHHHHHHHHHHHHHEEE--EEEEEEEE---EEETTEEEEEEEE
T ss_pred CHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHhcCCc--eEEEEEEE---EEcCCEEEEEEEE
Confidence 67888999999999999977889999999999999986676 88877777 5555666666444
No 194
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=92.45 E-value=0.11 Score=45.45 Aligned_cols=58 Identities=17% Similarity=0.126 Sum_probs=36.9
Q ss_pred eEEEEeCCCCCCCCCCCCC---------------c-cHHHHHHHHHHHHcCCcEEEEEcCCCHHHHHHHHHhCCC
Q 014608 10 LMIVSDLDHTMVDHHDAEN---------------L-SLLRFNALWEAHYRRDSLLVFSTGRSPTLYKQLRKEKPM 68 (421)
Q Consensus 10 klI~~DLDGTLl~~~~~~~---------------~-s~~~~~al~~~l~~~g~~vviaTGRs~~~~~~l~~~~~~ 68 (421)
|++++||||||+.+..... . -...+..+++.+ .+.+.+++.|..+...+..+.+.+..
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~~FL~~l-~~~~ev~i~T~~~~~ya~~v~~~ldp 74 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLPYDFKIIDQRGGYYVKLRPGLDEFLEEL-SKHYEVVIWTSASEEYAEPVLDALDP 74 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT-SEEEETEEEEEEEEE-TTHHHHHHHH-HHHCEEEEE-SS-HHHHHHHHHHHTT
T ss_pred CEEEEeCCCcEEEEeecCCCCcccceeccccceeEeeCchHHHHHHHH-HHhceEEEEEeehhhhhhHHHHhhhh
Confidence 6899999999987653210 0 111244555455 45689999998888888888887663
No 195
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=92.37 E-value=0.36 Score=42.63 Aligned_cols=24 Identities=17% Similarity=0.124 Sum_probs=17.9
Q ss_pred CCCCCcEEEEcCCcCchhhhcCCC
Q 014608 191 GKVPTNTLVCGDSGNDAELFSIPE 214 (421)
Q Consensus 191 gi~~~~vl~~GDs~NDi~M~~~ag 214 (421)
|.++++++++||+..|+.+....|
T Consensus 109 ~~~~~~vIiVDD~~~~~~~~~~Ng 132 (162)
T TIGR02251 109 GKDLSKVIIIDNSPYSYSLQPDNA 132 (162)
T ss_pred CCChhhEEEEeCChhhhccCccCE
Confidence 667778888888888877766555
No 196
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=92.27 E-value=0.55 Score=41.25 Aligned_cols=61 Identities=16% Similarity=0.124 Sum_probs=40.3
Q ss_pred CCCeEEEEeCCCCCCCCCCCCCcc--------------------------------HHHHHHHHHHHHcCCcEEEEEcCC
Q 014608 7 AARLMIVSDLDHTMVDHHDAENLS--------------------------------LLRFNALWEAHYRRDSLLVFSTGR 54 (421)
Q Consensus 7 ~~~klI~~DLDGTLl~~~~~~~~s--------------------------------~~~~~al~~~l~~~g~~vviaTGR 54 (421)
.+++.+++|||.||+.+......+ ...+..+++.+. +.+.+++.|..
T Consensus 4 ~~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~efL~~l~-~~yel~I~T~~ 82 (156)
T TIGR02250 4 EKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFLKEAS-KLYEMHVYTMG 82 (156)
T ss_pred CCceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHHHHHHH-hhcEEEEEeCC
Confidence 457899999999999875321100 112345555554 55888888888
Q ss_pred CHHHHHHHHHhCCC
Q 014608 55 SPTLYKQLRKEKPM 68 (421)
Q Consensus 55 s~~~~~~l~~~~~~ 68 (421)
+...+..+.+.+++
T Consensus 83 ~~~yA~~vl~~ldp 96 (156)
T TIGR02250 83 TRAYAQAIAKLIDP 96 (156)
T ss_pred cHHHHHHHHHHhCc
Confidence 77777777777664
No 197
>COG4319 Ketosteroid isomerase homolog [Function unknown]
Probab=92.14 E-value=2.9 Score=35.63 Aligned_cols=115 Identities=10% Similarity=0.062 Sum_probs=74.2
Q ss_pred hHHHHHHHHHHHHhcccccCCHHHHHHHHhccCCCceEeCCCCccc-----CHHHHHHHHHhhcCCCCCceEEEEEeeeE
Q 014608 285 HEVVKLYLFYERWRRAEIDNSEIYLSSLKANCCPSGFCVPPSGGEI-----SLAEAINQFRKCYGDKQGKQFRVWVDRVL 359 (421)
Q Consensus 285 ~evv~~~~~~e~w~~~~~~~~~~~~~~l~~~~~p~~~~v~~~G~~~-----~~~~~~~~~~~~~g~~~g~~~~i~vd~~~ 359 (421)
.++-.....+..|..+- ....++++++-..++-..+.|.|... -...+.+.|..+.| + ++....++
T Consensus 7 ~~~~~I~a~i~dw~~Av---~a~D~~av~~~YtdDav~f~~~~~~~~Gk~~i~k~~~~~~~~~~~--~---~~f~~~el- 77 (137)
T COG4319 7 DQVDAIRAAIADWAAAV---RAKDADAVADFYTDDAVVFPPPGLQRKGKAAIRKAFEGIFAMGIG--P---LKFTLEEL- 77 (137)
T ss_pred chHHHHHHHHHHHHHHH---hcccHHHHHHhcCCceEEecCCCCcccCHHHHHHHHHHHHHhccC--C---Ccceeeee-
Confidence 45566668889999862 23478999999999999998875544 44445555566655 2 23333232
Q ss_pred EeeeeCCeEEEEEeeeEEe--Ccce---eeEEEEEEEEEeCCCCeeEEEeee-eccc
Q 014608 360 STEIGPGTWLVKFHKWELS--GEER---ACSIVSIIVRIKDASDHTYMHVHE-TWLE 410 (421)
Q Consensus 360 ~~~~~~~~~~v~~~~~~~~--~~~~---~~~~~t~~~~~~~~~~~~w~h~he-t~~~ 410 (421)
.+..++|.+.+..--.=.. .+.+ .-++.|.+|++...+ .|+-.|| +|-.
T Consensus 78 ~v~~~GD~a~~~~~~~~~~~~~dg~~~~~~~Rat~v~rK~~dg--~Wk~~~dh~~~~ 132 (137)
T COG4319 78 QVHESGDVAFVTALLLLTGTKKDGPPADLAGRATYVFRKEADG--GWKLAHDHIPNT 132 (137)
T ss_pred eeeccCCEEEEEEeeeeeccCCCCcchhheeeeEEEEEEcCCC--CEEEEEeccccC
Confidence 3447888888876544332 2222 458899999885444 6888888 7654
No 198
>COG4996 Predicted phosphatase [General function prediction only]
Probab=92.03 E-value=0.55 Score=39.60 Aligned_cols=60 Identities=18% Similarity=0.135 Sum_probs=39.0
Q ss_pred eEEEEeCCCCCCCCCC------CCC-cc--------------HHHHHHHHHHHHcCCcEEEEEcCCCHHHHHHHHHhCCC
Q 014608 10 LMIVSDLDHTMVDHHD------AEN-LS--------------LLRFNALWEAHYRRDSLLVFSTGRSPTLYKQLRKEKPM 68 (421)
Q Consensus 10 klI~~DLDGTLl~~~~------~~~-~s--------------~~~~~al~~~l~~~g~~vviaTGRs~~~~~~l~~~~~~ 68 (421)
++|+||+||||.++++ +.. .| ...+.++++.++..|+.+..+|-.-+..+.+..+.+++
T Consensus 1 ~~i~~d~d~t~wdhh~iSsl~pPf~rVs~n~i~Ds~G~ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLral~~ 80 (164)
T COG4996 1 RAIVFDADKTLWDHHNISSLEPPFRRVSSNTIEDSKGREVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRALDL 80 (164)
T ss_pred CcEEEeCCCcccccccchhcCCcceecCccceecCCCeEEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHHhch
Confidence 4799999999999873 110 00 01233444456788888888888877666666666665
Q ss_pred C
Q 014608 69 L 69 (421)
Q Consensus 69 ~ 69 (421)
.
T Consensus 81 ~ 81 (164)
T COG4996 81 L 81 (164)
T ss_pred h
Confidence 3
No 199
>PF08332 CaMKII_AD: Calcium/calmodulin dependent protein kinase II Association; InterPro: IPR013543 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain is found at the C terminus of the Calcium/calmodulin dependent protein kinases II (CaMKII). These proteins also have a Ser/Thr protein kinase domain (IPR000719 from INTERPRO) at their N terminus []. The function of the CaMKII association domain is the assembly of the single proteins into large (8 to 14 subunits) multimers [] and is a prominent kinase in the central nervous system that may function in long-term potentiation and neurotransmitter release. ; GO: 0004683 calmodulin-dependent protein kinase activity, 0005516 calmodulin binding, 0006468 protein phosphorylation; PDB: 2W2C_F 3H51_B 3SOA_A 2UX0_A 1HKX_M 2F86_B.
Probab=91.61 E-value=3.3 Score=35.07 Aligned_cols=111 Identities=12% Similarity=0.013 Sum_probs=69.9
Q ss_pred hHHHHHHHHHHHHhcccccCCHHHHHHHHhccCCCceEeC--CCCcccCHHHHHHH-HHhhcCCCCCceEEEEEeeeEEe
Q 014608 285 HEVVKLYLFYERWRRAEIDNSEIYLSSLKANCCPSGFCVP--PSGGEISLAEAINQ-FRKCYGDKQGKQFRVWVDRVLST 361 (421)
Q Consensus 285 ~evv~~~~~~e~w~~~~~~~~~~~~~~l~~~~~p~~~~v~--~~G~~~~~~~~~~~-~~~~~g~~~g~~~~i~vd~~~~~ 361 (421)
.||. .++++|+.+ =..+..+...+.++|+.+..- .+|..+.-.+.+.+ |...-..+ ++..+..|+.-.+.
T Consensus 3 ~eI~---~l~~~w~~a---i~tgD~~~~~~ly~~d~av~~Pt~s~~~~~g~~~~~~YF~~~l~~~-~~~~~~tI~~p~V~ 75 (128)
T PF08332_consen 3 QEIA---ALFDRWNDA---IQTGDPETYAKLYAPDVAVFEPTVSNQLREGLEFHKFYFDHFLAKK-PQGVNTTILNPHVR 75 (128)
T ss_dssp HHHH---HHHHHHHHH---HHHT-HHHHHHHEEEEEEEEEGGGTTSEEESCHHHHHHHHHTGTTT-SSCEEEEEEEEEEE
T ss_pred HHHH---HHHHHHHHH---HHcCCHHHHhhhcCCCeeEeccccCCceecChHHHHHHHhcccccC-CCceeeEecCCeEE
Confidence 4555 678999986 234567777788999955443 35666655555544 54333333 35588899998888
Q ss_pred eeeCCeEEEEEeeeEEe-C---cce-eeEEEEEEEEEeCCCCeeEEEee
Q 014608 362 EIGPGTWLVKFHKWELS-G---EER-ACSIVSIIVRIKDASDHTYMHVH 405 (421)
Q Consensus 362 ~~~~~~~~v~~~~~~~~-~---~~~-~~~~~t~~~~~~~~~~~~w~h~h 405 (421)
-.+++.|++.|.-.-+. + ..+ ...+=|-|.... .+ .|.++|
T Consensus 76 ~lg~~~Ai~~gvy~f~~~d~~G~~~~~~areT~v~~~~-~g--~W~ivh 121 (128)
T PF08332_consen 76 LLGDNAAIDAGVYTFQFVDKDGVPRTVQARETRVWQKR-DG--KWKIVH 121 (128)
T ss_dssp EESTTEEEEEEEEEEEEESTTSSEEEEEEEEEEEEEEE-TT--EEEEEE
T ss_pred EcCCCEEEEeeEEEEEeecCCCCeeeEEEeEEEEEEEe-CC--eEEEEE
Confidence 88999999999877654 2 222 234445555543 44 566665
No 200
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=91.47 E-value=0.19 Score=44.36 Aligned_cols=39 Identities=10% Similarity=-0.019 Sum_probs=33.5
Q ss_pred cCCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcC
Q 014608 171 PQGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSI 212 (421)
Q Consensus 171 p~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~ 212 (421)
....+.......+++++ |+++++|++|||+..|+...+.
T Consensus 136 ~~~KP~p~~f~~~~~~~---~~~p~~~l~vgD~~~Di~~A~~ 174 (175)
T TIGR01493 136 RAYKPDPVVYELVFDTV---GLPPDRVLMVAAHQWDLIGARK 174 (175)
T ss_pred CCCCCCHHHHHHHHHHH---CCCHHHeEeEecChhhHHHHhc
Confidence 33455688889999999 9999999999999999998764
No 201
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=91.40 E-value=0.4 Score=42.58 Aligned_cols=54 Identities=24% Similarity=0.345 Sum_probs=35.7
Q ss_pred cccCCCeEEEEeCCCCCCCCCC-------------------------------CCCccHHHHHHHHHHHHcCCcEEEEEc
Q 014608 4 LSAAARLMIVSDLDHTMVDHHD-------------------------------AENLSLLRFNALWEAHYRRDSLLVFST 52 (421)
Q Consensus 4 l~~~~~klI~~DLDGTLl~~~~-------------------------------~~~~s~~~~~al~~~l~~~g~~vviaT 52 (421)
|.+.+...+-||+|.|++-+.+ +.+++......|..-.+++|-.+++.|
T Consensus 58 LeG~~Pi~VsFDIDDTvLFsSp~F~~Gk~~~sPgs~DyLknq~FW~~vn~g~D~~SIPKevA~qLI~MHq~RGD~i~FvT 137 (237)
T COG3700 58 LEGRPPIAVSFDIDDTVLFSSPGFWRGKKYFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRGDAIYFVT 137 (237)
T ss_pred hcCCCCeeEeeccCCeeEecccccccCccccCCChHHhhcCHHHHHHHhcCCccccchHHHHHHHHHHHHhcCCeEEEEe
Confidence 5566788899999999986431 123333333444445567888888888
Q ss_pred CCCHH
Q 014608 53 GRSPT 57 (421)
Q Consensus 53 GRs~~ 57 (421)
||++.
T Consensus 138 GRt~g 142 (237)
T COG3700 138 GRTPG 142 (237)
T ss_pred cCCCC
Confidence 88753
No 202
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=91.08 E-value=0.34 Score=45.51 Aligned_cols=44 Identities=25% Similarity=0.209 Sum_probs=36.4
Q ss_pred cCCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCC
Q 014608 171 PQGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPE 214 (421)
Q Consensus 171 p~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~ag 214 (421)
|.+.-|+..++.+++.....|++.++++++||+.||+-.....+
T Consensus 146 ~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~ 189 (234)
T PF06888_consen 146 PPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLR 189 (234)
T ss_pred CCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccC
Confidence 66778999999998875334788899999999999998877544
No 203
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=90.96 E-value=0.23 Score=53.71 Aligned_cols=35 Identities=34% Similarity=0.445 Sum_probs=30.7
Q ss_pred cEEEEcCCcCchhhhcCCCceEEEecCChHHHHHHH
Q 014608 196 NTLVCGDSGNDAELFSIPEVYGVMVSNAQEELLQWH 231 (421)
Q Consensus 196 ~vl~~GDs~NDi~M~~~agv~gvav~NA~~elk~~a 231 (421)
-+++|||+.||+.+++.|. .|||.-|+.++.++..
T Consensus 808 ~TLMCGDGTNDVGALK~Ah-VGVALL~~~~e~~~~~ 842 (1160)
T KOG0209|consen 808 VTLMCGDGTNDVGALKQAH-VGVALLNNPEESKKDK 842 (1160)
T ss_pred EEEEecCCCcchhhhhhcc-cceehhcCChhhhhHH
Confidence 5899999999999999999 6999888888766543
No 204
>PF12893 Lumazine_bd_2: Putative lumazine-binding; PDB: 3BLZ_C 3DUK_F 3FKA_C.
Probab=90.90 E-value=3.1 Score=34.19 Aligned_cols=102 Identities=13% Similarity=0.028 Sum_probs=63.6
Q ss_pred HHHHHHhcccccCCHHHHHHHHhccCCCceEeCCCC---cccCHHHHHHHHHhhc---CCCCCceEEEEEeeeEEeeeeC
Q 014608 292 LFYERWRRAEIDNSEIYLSSLKANCCPSGFCVPPSG---GEISLAEAINQFRKCY---GDKQGKQFRVWVDRVLSTEIGP 365 (421)
Q Consensus 292 ~~~e~w~~~~~~~~~~~~~~l~~~~~p~~~~v~~~G---~~~~~~~~~~~~~~~~---g~~~g~~~~i~vd~~~~~~~~~ 365 (421)
..++..+.| -..+..+.|++.|+|++.|....+ ...+..++++.+.+.- +..+- ....| ..+++.+
T Consensus 8 ~~v~~Y~dg---~~~gD~~~l~~~f~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~--~~~~i---~~i~i~g 79 (116)
T PF12893_consen 8 ATVQDYFDG---LYNGDSEKLRSAFHPDARLQGVRKGKLRTMPIEEFIARVKSRVSPKPPGQE--RKESI---LSIDIDG 79 (116)
T ss_dssp HHHHHHHHH---HHHT-HHHHGGGEEEEEEEEEEETTEEEEEETHHHHHHHHHC---H-SSTT---EEEE---EEEEEET
T ss_pred HHHHHHHHH---HHhcCHHHHHHhhCCCcEEEEEcCCceEEeCHHHHHHHHHhhccccCCCCC--ceeEE---EEEEEEC
Confidence 334445544 123467889999999999988764 4558899999988752 33333 44444 4567777
Q ss_pred CeEEEEEeeeEEeCcceeeEEEEEEEEEeCCCCeeEEEeeeec
Q 014608 366 GTWLVKFHKWELSGEERACSIVSIIVRIKDASDHTYMHVHETW 408 (421)
Q Consensus 366 ~~~~v~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~w~h~het~ 408 (421)
+.|.|+..-.-. +. |.+-.+.-.|..+ .|+-+|.+|
T Consensus 80 ~~A~a~v~~~~~-~~----~~~d~~~L~K~dg--~WkIv~k~~ 115 (116)
T PF12893_consen 80 DVASAKVEYEFP-GF----WFVDYFTLVKTDG--GWKIVSKVY 115 (116)
T ss_dssp TEEEEEEEEEEE-TE----EEEEEEEEEEETT--EEEEEEEEE
T ss_pred CEEEEEEEEEEC-CC----ceEEEEEEEEECC--EEEEEEEec
Confidence 999997765433 21 3333333333344 799999987
No 205
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=90.73 E-value=0.61 Score=42.54 Aligned_cols=60 Identities=22% Similarity=0.275 Sum_probs=40.9
Q ss_pred CCeEEEEeCCCCCCCCCCC-C---CccHHHHHHHHHHHHcCCcEEEEEcCCCHHHHHHHHHhCCC
Q 014608 8 ARLMIVSDLDHTMVDHHDA-E---NLSLLRFNALWEAHYRRDSLLVFSTGRSPTLYKQLRKEKPM 68 (421)
Q Consensus 8 ~~klI~~DLDGTLl~~~~~-~---~~s~~~~~al~~~l~~~g~~vviaTGRs~~~~~~l~~~~~~ 68 (421)
.+|+++.|||+||+++... . ..-...+..+++.+. +.+.++|=|..+...+..+...+++
T Consensus 20 ~kklLVLDLDeTLvh~~~~~~~~~~~kRP~l~eFL~~~~-~~feIvVwTAa~~~ya~~~l~~l~~ 83 (195)
T TIGR02245 20 GKKLLVLDIDYTLFDHRSPAETGEELMRPYLHEFLTSAY-EDYDIVIWSATSMKWIEIKMTELGV 83 (195)
T ss_pred CCcEEEEeCCCceEcccccCCCceEEeCCCHHHHHHHHH-hCCEEEEEecCCHHHHHHHHHHhcc
Confidence 5689999999999986421 0 111112445555554 4888888888887788888887764
No 206
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=90.56 E-value=0.14 Score=46.15 Aligned_cols=41 Identities=20% Similarity=0.368 Sum_probs=34.1
Q ss_pred EecCCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCC
Q 014608 169 ILPQGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPE 214 (421)
Q Consensus 169 I~p~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~ag 214 (421)
-+..+-.|+.+|+.+++.+ +.+.++++||+.||++|...+.
T Consensus 153 ptsdsggKa~~i~~lrk~~-----~~~~~~mvGDGatDlea~~pa~ 193 (227)
T KOG1615|consen 153 PTSDSGGKAEVIALLRKNY-----NYKTIVMVGDGATDLEAMPPAD 193 (227)
T ss_pred ccccCCccHHHHHHHHhCC-----ChheeEEecCCccccccCCchh
Confidence 3455678999999999844 7799999999999999988643
No 207
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=88.40 E-value=0.21 Score=44.12 Aligned_cols=15 Identities=40% Similarity=0.494 Sum_probs=13.1
Q ss_pred EEEEeCCCCCCCCCC
Q 014608 11 MIVSDLDHTMVDHHD 25 (421)
Q Consensus 11 lI~~DLDGTLl~~~~ 25 (421)
.|+||+||||+|+..
T Consensus 1 ~viFD~DGTL~D~~~ 15 (175)
T TIGR01493 1 AMVFDVYGTLVDVHG 15 (175)
T ss_pred CeEEecCCcCcccHH
Confidence 379999999999874
No 208
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=88.05 E-value=0.56 Score=44.15 Aligned_cols=83 Identities=18% Similarity=0.219 Sum_probs=47.0
Q ss_pred CCCceEEEEEEcccc--hHHHHHHHHHHHHhcCCcEEEEEEcCeeEEEecCCCCHHHHHHHHHHHHhhCCCCCCcEEEEc
Q 014608 124 EQRPHKVSFYVDKDK--AQTVTQKLSEIFKNRGLDVKIIYSGGMDLDILPQGAGKGQALAYLLRKFKCEGKVPTNTLVCG 201 (421)
Q Consensus 124 ~~~~~ki~~~~~~~~--~~~~~~~l~~~l~~~~~~~~v~~s~~~~ldI~p~g~sKg~al~~L~~~l~~~gi~~~~vl~~G 201 (421)
..+..++.+.+.+.. .+...+.+.+.+.-. .-+.+++.+.... +..-+| . ..++++ |+ ++++|
T Consensus 127 ~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~-~~f~~i~~~d~~~---~~Kp~~---~-~~l~~~---~i----~i~vG 191 (237)
T TIGR01672 127 QRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIP-AMNPVIFAGDKPG---QYQYTK---T-QWIQDK---NI----RIHYG 191 (237)
T ss_pred HHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCc-hheeEEECCCCCC---CCCCCH---H-HHHHhC---CC----eEEEe
Confidence 345667777776422 344555565544310 1123333332111 111223 2 234556 65 79999
Q ss_pred CCcCchhhhcCCCceEEEec
Q 014608 202 DSGNDAELFSIPEVYGVMVS 221 (421)
Q Consensus 202 Ds~NDi~M~~~agv~gvav~ 221 (421)
|+.||+...+.+|+.++++.
T Consensus 192 Ds~~DI~aAk~AGi~~I~V~ 211 (237)
T TIGR01672 192 DSDNDITAAKEAGARGIRIL 211 (237)
T ss_pred CCHHHHHHHHHCCCCEEEEE
Confidence 99999999999998877774
No 209
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=85.92 E-value=0.7 Score=47.64 Aligned_cols=85 Identities=18% Similarity=0.267 Sum_probs=57.6
Q ss_pred CCcEEEEcCCcCchhhhcCCCceEEEecCChHHHHHHHHhhc-CCCCceeeccCCCccHHHHHH--HHhhCCCCCCCCCC
Q 014608 194 PTNTLVCGDSGNDAELFSIPEVYGVMVSNAQEELLQWHAANA-KNNPKLTHATERCAAGIIQAI--GHFKLGPSTSPRDI 270 (421)
Q Consensus 194 ~~~vl~~GDs~NDi~M~~~agv~gvav~NA~~elk~~a~~v~-~~~~~~~~~~~~~~~GV~~~l--~~~~l~~~~~~r~~ 270 (421)
-.-+.++||+.||.+.+..++ .|+||-+.....|++++-+- ++|| --+++.+ .+-+|..+-
T Consensus 509 grlVAMtGDGTNDAPALAqAd-Vg~AMNsGTqAAkEAaNMVDLDS~P----------TKlievV~IGKqlLiTRG----- 572 (681)
T COG2216 509 GRLVAMTGDGTNDAPALAQAD-VGVAMNSGTQAAKEAANMVDLDSNP----------TKLIEVVEIGKQLLITRG----- 572 (681)
T ss_pred CcEEEEcCCCCCcchhhhhcc-hhhhhccccHHHHHhhcccccCCCc----------cceehHhhhhhhheeecc-----
Confidence 356899999999999999999 79999999999999877653 3443 2334433 222222211
Q ss_pred CCCCCCccccCCchhHHHHHHHHHHHHhcc
Q 014608 271 KDESDGEVKSIDLGHEVVKLYLFYERWRRA 300 (421)
Q Consensus 271 ~~~~~~~~~~~~~~~evv~~~~~~e~w~~~ 300 (421)
.+-+|+.+..|-+++..+-.-|.+
T Consensus 573 ------aLTTFSIANDvAKYFaIiPA~F~~ 596 (681)
T COG2216 573 ------ALTTFSIANDVAKYFAIIPAMFAA 596 (681)
T ss_pred ------cceeeehhhHHHHHHHHHHHHHHh
Confidence 123566777777777766655543
No 210
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=85.26 E-value=0.85 Score=42.03 Aligned_cols=44 Identities=23% Similarity=0.246 Sum_probs=36.4
Q ss_pred eeEEEecCCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchh
Q 014608 165 MDLDILPQGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAE 208 (421)
Q Consensus 165 ~~ldI~p~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~ 208 (421)
.....-|++.-||.-+..+....-.+|+..++++++||+.||+-
T Consensus 153 hsC~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~C 196 (256)
T KOG3120|consen 153 HSCNLCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFC 196 (256)
T ss_pred CccCcCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcC
Confidence 34556788999999998877765456899999999999999984
No 211
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=85.22 E-value=0.96 Score=41.82 Aligned_cols=58 Identities=22% Similarity=0.268 Sum_probs=35.0
Q ss_pred CCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceE-EEec-CChHHHHHHHH
Q 014608 172 QGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYG-VMVS-NAQEELLQWHA 232 (421)
Q Consensus 172 ~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~g-vav~-NA~~elk~~a~ 232 (421)
-|.+|..++....-.++ +++.. ++++|||..|++||+.+.-.| +||+ |+.+-....|+
T Consensus 187 VGgg~ka~i~e~~~ele--~~d~s-a~~VGDSItDv~ml~~~rgrGglAvaFNGNeYal~eAd 246 (315)
T COG4030 187 VGGGEKAKIMEGYCELE--GIDFS-AVVVGDSITDVKMLEAARGRGGLAVAFNGNEYALKEAD 246 (315)
T ss_pred ccCcchhHHHHHHHhhc--CCCcc-eeEecCcccchHHHHHhhccCceEEEecCCcccccccc
Confidence 34455555544444442 55544 999999999999999763233 3332 56555544443
No 212
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=85.17 E-value=0.67 Score=52.67 Aligned_cols=41 Identities=24% Similarity=0.360 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEecCC
Q 014608 176 KGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMVSNA 223 (421)
Q Consensus 176 Kg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav~NA 223 (421)
|+.-++.+.+.. ...+++|||+.||+.|++.|+ .||.++..
T Consensus 782 KA~Vv~lVk~~~------~~~TLAIGDGANDVsMIQ~Ah-VGVGIsG~ 822 (1151)
T KOG0206|consen 782 KALVVKLVKKGL------KAVTLAIGDGANDVSMIQEAH-VGVGISGQ 822 (1151)
T ss_pred HHHHHHHHHhcC------CceEEEeeCCCccchheeeCC-cCeeeccc
Confidence 777777774433 578999999999999999887 57765543
No 213
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=85.14 E-value=0.94 Score=49.38 Aligned_cols=54 Identities=20% Similarity=0.187 Sum_probs=39.7
Q ss_pred CCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEecCChHHH-HHHHHhh
Q 014608 173 GAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMVSNAQEEL-LQWHAAN 234 (421)
Q Consensus 173 g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav~NA~~el-k~~a~~v 234 (421)
..+|-.-++-|.++ .+-+.+-||+.||-+.|+.|+ .|+||+=|--++ |+.+|.+
T Consensus 724 P~DK~lLVk~L~~~-------g~VVAVTGDGTNDaPALkeAD-VGlAMGIaGTeVAKEaSDII 778 (1034)
T KOG0204|consen 724 PNDKHLLVKGLIKQ-------GEVVAVTGDGTNDAPALKEAD-VGLAMGIAGTEVAKEASDII 778 (1034)
T ss_pred CchHHHHHHHHHhc-------CcEEEEecCCCCCchhhhhcc-cchhccccchhhhhhhCCeE
Confidence 45677766666532 256788899999999999999 799999986555 4444433
No 214
>PF04312 DUF460: Protein of unknown function (DUF460); InterPro: IPR007408 This is an archaeal protein of unknown function.
Probab=84.86 E-value=2 Score=36.54 Aligned_cols=55 Identities=18% Similarity=0.231 Sum_probs=39.4
Q ss_pred eEEEEeCCCCCCCCCCCCCccHHHHHHHHHHHHcCCcEEEEEcCC--CHHHHHHHHHhCC
Q 014608 10 LMIVSDLDHTMVDHHDAENLSLLRFNALWEAHYRRDSLLVFSTGR--SPTLYKQLRKEKP 67 (421)
Q Consensus 10 klI~~DLDGTLl~~~~~~~~s~~~~~al~~~l~~~g~~vviaTGR--s~~~~~~l~~~~~ 67 (421)
-+-++||||.++.-....+.+. ..+.+...+.|..++++|-- +|..++.+...++
T Consensus 44 giAildL~G~~l~l~S~R~~~~---~evi~~I~~~G~PviVAtDV~p~P~~V~Kia~~f~ 100 (138)
T PF04312_consen 44 GIAILDLDGELLDLKSSRNMSR---SEVIEWISEYGKPVIVATDVSPPPETVKKIARSFN 100 (138)
T ss_pred EEEEEecCCcEEEEEeecCCCH---HHHHHHHHHcCCEEEEEecCCCCcHHHHHHHHHhC
Confidence 4568999999987654444542 34445667899999999954 4567787887764
No 215
>PF11533 DUF3225: Protein of unknown function (DUF3225); InterPro: IPR024507 This family of proteins has no known function.; PDB: 2OWP_A 2RCD_B.
Probab=84.72 E-value=22 Score=29.84 Aligned_cols=117 Identities=21% Similarity=0.206 Sum_probs=76.2
Q ss_pred CCchhHHHHHHHHHHHHhcccccCCHHHHHHHHhccCCCceEeCCC-CcccCHHHHHHHHHhhc-CCCCCceEEEEEeee
Q 014608 281 IDLGHEVVKLYLFYERWRRAEIDNSEIYLSSLKANCCPSGFCVPPS-GGEISLAEAINQFRKCY-GDKQGKQFRVWVDRV 358 (421)
Q Consensus 281 ~~~~~evv~~~~~~e~w~~~~~~~~~~~~~~l~~~~~p~~~~v~~~-G~~~~~~~~~~~~~~~~-g~~~g~~~~i~vd~~ 358 (421)
+..-.||-..+..||+=|.+ |+-.. |-+-|.++-.-|--. |.-|=-.+-|..||..+ |..|.. ++.+.
T Consensus 6 p~v~aev~aaf~~YE~AL~~---nDv~~---Ld~lFw~~p~TvRyg~~E~LyG~~aI~aFR~~R~~~~~~R----~l~~~ 75 (125)
T PF11533_consen 6 PEVVAEVTAAFDRYERALMA---NDVDA---LDALFWDDPRTVRYGAGENLYGHDAIRAFRAARPGGGPAR----TLERT 75 (125)
T ss_dssp HHHHHHHHHHHHHHHHHHHC---T-HHH---HHHCB--STT-EEEETTEEEESHHHHHHHHHHS--TTTT-----EEEEE
T ss_pred HHHHHHHHHHHHHHHHHHhh---CCHHH---HHHHhccCCceEEECCCccccCHHHHHHHHhcCCCCCCCc----EEEEE
Confidence 34457999999999999984 54444 445565555544443 44455566777888887 655652 56799
Q ss_pred EEeeeeCCeEEEEEeeeEEeCcceeeEEEEEEEEEeCCCCeeEEEeeeeccc
Q 014608 359 LSTEIGPGTWLVKFHKWELSGEERACSIVSIIVRIKDASDHTYMHVHETWLE 410 (421)
Q Consensus 359 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~w~h~het~~~ 410 (421)
.++.-++|.++|. .|..+.+..+.+|.|..-.+. |+|++-..-|=++++
T Consensus 76 ~itt~G~d~A~v~-tef~r~~~~~~GRQsQtWvr~--~~gWrIvaAHVS~~~ 124 (125)
T PF11533_consen 76 VITTFGRDFATVS-TEFRRDGSGRIGRQSQTWVRF--PDGWRIVAAHVSLMD 124 (125)
T ss_dssp EEEEETTTEEEEE-EEEEETTECCEEEEEEEEEEE--TTEEEEEEEEEEEE-
T ss_pred EEEEecCceEEEE-EEEEECCCCceeEeEEEEEEC--CCCEEEEEEEEeecc
Confidence 9999999988874 344556777889999988877 555554445655543
No 216
>cd00781 ketosteroid_isomerase ketosteroid isomerase: Many biological reactions proceed by enzymatic cleavage of a C-H bond adjacent to carbonyl or a carboxyl group, leading to an enol or a enolate intermediate that is subsequently re-protonated at the same or an adjacent carbon. Ketosteroid isomerases are important members of this class of enzymes which are the most proficient of all enzymes known and have served as a paradigm for enzymatic enolizations since its discovery in 1954. This CD includes members of this class that calalyze the isomerization of various beta,gamma-unsaturated isomers at nearly a diffusion-controlled rate. These enzymes are widely distributed in bacteria.
Probab=84.34 E-value=16 Score=29.66 Aligned_cols=73 Identities=12% Similarity=0.090 Sum_probs=48.1
Q ss_pred HHHHHhcccccCCHHHHHHHHhccCCCceEeCCCCc--ccCHHHHHHHHHhhcCCCCCceEEEEEeeeEEeeeeCCeEEE
Q 014608 293 FYERWRRAEIDNSEIYLSSLKANCCPSGFCVPPSGG--EISLAEAINQFRKCYGDKQGKQFRVWVDRVLSTEIGPGTWLV 370 (421)
Q Consensus 293 ~~e~w~~~~~~~~~~~~~~l~~~~~p~~~~v~~~G~--~~~~~~~~~~~~~~~g~~~g~~~~i~vd~~~~~~~~~~~~~v 370 (421)
+++.|-++ .++.|.+.++|+..+..|.|. ..-.+++..++....+..+. +++.+... ...++.+++
T Consensus 12 ~~~a~~~~-------D~~~~~~l~aed~~~~~p~~~~~~~G~~~i~~~~~~~~~~~~~--~~~~~~~~---~~~g~~~~~ 79 (122)
T cd00781 12 YVEAVNAG-------DPEGIVALFADDATVEDPVGSPPRSGRAAIAAFYAQSLGGAKR--LELTGPVR---ASHGGEAAF 79 (122)
T ss_pred HHHHHHCC-------CHHHHHHHcCCCeEEeCCCCCCCccCHHHHHHHHHHHhccCce--EEecCcee---eecCCEEEE
Confidence 45666543 456788889999999888654 66788899999888876444 55433222 234566777
Q ss_pred EEeeeEEe
Q 014608 371 KFHKWELS 378 (421)
Q Consensus 371 ~~~~~~~~ 378 (421)
.+ .++..
T Consensus 80 ~~-~~~~~ 86 (122)
T cd00781 80 AF-RVEFE 86 (122)
T ss_pred EE-EEEEE
Confidence 65 44443
No 217
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=83.22 E-value=1.2 Score=46.68 Aligned_cols=39 Identities=33% Similarity=0.513 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEecC
Q 014608 176 KGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMVSN 222 (421)
Q Consensus 176 Kg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav~N 222 (421)
|..+++ +.+ |.+... ++.|||.||.+||+.++ ++++|..
T Consensus 177 Kv~rl~---~~~---g~~~~~-~aYgDS~sD~plL~~a~-e~y~V~~ 215 (497)
T PLN02177 177 KRDAVL---KEF---GDALPD-LGLGDRETDHDFMSICK-EGYMVPR 215 (497)
T ss_pred HHHHHH---HHh---CCCCce-EEEECCccHHHHHHhCC-ccEEeCC
Confidence 666665 556 655444 89999999999999999 9999987
No 218
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=81.62 E-value=0.72 Score=41.69 Aligned_cols=14 Identities=21% Similarity=0.366 Sum_probs=12.4
Q ss_pred EEEEeCCCCCCCCC
Q 014608 11 MIVSDLDHTMVDHH 24 (421)
Q Consensus 11 lI~~DLDGTLl~~~ 24 (421)
+++||+||||++.+
T Consensus 1 ~a~FD~DgTL~~~~ 14 (202)
T TIGR01490 1 LAFFDFDGTLTAKD 14 (202)
T ss_pred CeEEccCCCCCCCc
Confidence 47999999999976
No 219
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=79.60 E-value=0.79 Score=40.40 Aligned_cols=15 Identities=40% Similarity=0.561 Sum_probs=12.8
Q ss_pred EEEEeCCCCCCCCCC
Q 014608 11 MIVSDLDHTMVDHHD 25 (421)
Q Consensus 11 lI~~DLDGTLl~~~~ 25 (421)
.++|||||||++...
T Consensus 1 ~vlFDlDgtLv~~~~ 15 (183)
T TIGR01509 1 AILFDLDGVLVDTSS 15 (183)
T ss_pred CeeeccCCceechHH
Confidence 379999999999863
No 220
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=77.43 E-value=1.3 Score=39.44 Aligned_cols=22 Identities=9% Similarity=0.077 Sum_probs=15.7
Q ss_pred HHHHHHHHHHhhCCCCCCcEEEEcC
Q 014608 178 QALAYLLRKFKCEGKVPTNTLVCGD 202 (421)
Q Consensus 178 ~al~~L~~~l~~~gi~~~~vl~~GD 202 (421)
..++.+++.+ |++..++++-.-
T Consensus 117 ~~i~~~~~~~---~i~~~~v~~~~~ 138 (192)
T PF12710_consen 117 EIIEPIAERL---GIDDDNVIGNEL 138 (192)
T ss_dssp HHHHHHHHHT---TSSEGGEEEEEE
T ss_pred HHHHHHHHHc---CCCceEEEEEee
Confidence 4567778888 888877665554
No 221
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=74.70 E-value=2.6 Score=44.86 Aligned_cols=40 Identities=20% Similarity=0.192 Sum_probs=36.0
Q ss_pred CcEEEEcCCcCchhhhcCCCceEEEecCChHHHHHHHHhhc
Q 014608 195 TNTLVCGDSGNDAELFSIPEVYGVMVSNAQEELLQWHAANA 235 (421)
Q Consensus 195 ~~vl~~GDs~NDi~M~~~agv~gvav~NA~~elk~~a~~v~ 235 (421)
..|-+-||+-||.+.++.++ .|++|++|.+.++..++.|.
T Consensus 585 hi~gmtgdgvndapaLKkAd-igiava~atdaar~asdiVl 624 (942)
T KOG0205|consen 585 HIVGMTGDGVNDAPALKKAD-IGIAVADATDAARSASDIVL 624 (942)
T ss_pred ceecccCCCcccchhhcccc-cceeeccchhhhcccccEEE
Confidence 56889999999999999999 89999999999998777654
No 222
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=74.05 E-value=5.7 Score=39.10 Aligned_cols=54 Identities=17% Similarity=0.085 Sum_probs=36.4
Q ss_pred EEEEeCCCCCCCCCCCCCccHHHHHHHHHHHHcC----CcEEEEEc---CCCHHHHHH-HHHhCCC
Q 014608 11 MIVSDLDHTMVDHHDAENLSLLRFNALWEAHYRR----DSLLVFST---GRSPTLYKQ-LRKEKPM 68 (421)
Q Consensus 11 lI~~DLDGTLl~~~~~~~~s~~~~~al~~~l~~~----g~~vviaT---GRs~~~~~~-l~~~~~~ 68 (421)
.++||+||||++......- ..+++. .+..+ |..+.+.| |++...... +.+.+++
T Consensus 2 ~~ifD~DGvL~~g~~~i~g---a~eal~-~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~ 63 (321)
T TIGR01456 2 GFAFDIDGVLFRGKKPIAG---ASDALR-RLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGV 63 (321)
T ss_pred EEEEeCcCceECCccccHH---HHHHHH-HHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCC
Confidence 5899999999998765322 234444 45566 88888888 666665444 4466665
No 223
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=72.99 E-value=2.9 Score=41.70 Aligned_cols=44 Identities=23% Similarity=0.210 Sum_probs=29.4
Q ss_pred CCeEEEEeCCCCCCCCCCCC----C------ccHHHHHHHHHHHHcCCcEEEEEc
Q 014608 8 ARLMIVSDLDHTMVDHHDAE----N------LSLLRFNALWEAHYRRDSLLVFST 52 (421)
Q Consensus 8 ~~klI~~DLDGTLl~~~~~~----~------~s~~~~~al~~~l~~~g~~vviaT 52 (421)
..|++.||+||||++..... . +-...-..|. .++..|+.++|.|
T Consensus 74 ~~K~i~FD~dgtlI~t~sg~vf~~~~~dw~~l~~~vp~Klk-tl~~~g~~l~ift 127 (422)
T KOG2134|consen 74 GSKIIMFDYDGTLIDTKSGKVFPKGSMDWRILFPEVPSKLK-TLYQDGIKLFIFT 127 (422)
T ss_pred CcceEEEecCCceeecCCcceeeccCccceeeccccchhhh-hhccCCeEEEEEe
Confidence 36899999999999876310 0 0011122344 5788999999988
No 224
>TIGR02096 conserved hypothetical protein, steroid delta-isomerase-related. This family of proteins about 135 amino acids in length largely restricted to the Proteobacteria. This family and a delta5-3-ketosteroid isomerase from Pseudomonas testosteroni appear homologous, especially toward their respective N-termini. Members, therefore, probably are enzymes.
Probab=71.71 E-value=22 Score=29.14 Aligned_cols=57 Identities=12% Similarity=0.022 Sum_probs=43.1
Q ss_pred HHHHHhcccccCCHHHHHHHHhccCCCceEeCCCC-cccC-HHHHHHHHHhhcCCCCCceEEEEEeee
Q 014608 293 FYERWRRAEIDNSEIYLSSLKANCCPSGFCVPPSG-GEIS-LAEAINQFRKCYGDKQGKQFRVWVDRV 358 (421)
Q Consensus 293 ~~e~w~~~~~~~~~~~~~~l~~~~~p~~~~v~~~G-~~~~-~~~~~~~~~~~~g~~~g~~~~i~vd~~ 358 (421)
+++.|-++ .++.+.+.++|++.+..|.+ .... ..++.+++...+..-|+ +++.|.++
T Consensus 7 ~~~a~~~~-------d~~~~~~~~~~d~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~--~~~~i~~~ 65 (129)
T TIGR02096 7 WIEAFNRG-------DMDAVLALLAEDVLYDDNQGGRVLGGKAQLARFLAPYRTAFPD--LLVDVVVC 65 (129)
T ss_pred HHHHHHCC-------CHHHHHHhcCCCeEEEcCCCCcEeccHHHHHHHHHHHHHhCch--hhceeEEE
Confidence 45556543 47788889999999998875 3445 88999999999988888 66666544
No 225
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=71.67 E-value=2 Score=38.83 Aligned_cols=17 Identities=18% Similarity=0.026 Sum_probs=14.4
Q ss_pred eEEEEeCCCCCCCCCCC
Q 014608 10 LMIVSDLDHTMVDHHDA 26 (421)
Q Consensus 10 klI~~DLDGTLl~~~~~ 26 (421)
+.|+||.||||++....
T Consensus 2 ~~i~fDktGTLt~~~~~ 18 (215)
T PF00702_consen 2 DAICFDKTGTLTQGKMS 18 (215)
T ss_dssp SEEEEECCTTTBESHHE
T ss_pred eEEEEecCCCcccCeEE
Confidence 68999999999988643
No 226
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=71.30 E-value=2.6 Score=39.60 Aligned_cols=15 Identities=47% Similarity=0.868 Sum_probs=13.6
Q ss_pred EEEEeCCCCCCCCCC
Q 014608 11 MIVSDLDHTMVDHHD 25 (421)
Q Consensus 11 lI~~DLDGTLl~~~~ 25 (421)
|++||+|+||++.+.
T Consensus 2 LvvfDFD~TIvd~ds 16 (234)
T PF06888_consen 2 LVVFDFDHTIVDQDS 16 (234)
T ss_pred EEEEeCCCCccCCcc
Confidence 799999999999874
No 227
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=69.45 E-value=4 Score=36.26 Aligned_cols=50 Identities=26% Similarity=0.392 Sum_probs=38.1
Q ss_pred CCHHHHHHHHHHHHhhC--CCCCCcEEEEcCC-cCchhhhcCCCceEEEecCC
Q 014608 174 AGKGQALAYLLRKFKCE--GKVPTNTLVCGDS-GNDAELFSIPEVYGVMVSNA 223 (421)
Q Consensus 174 ~sKg~al~~L~~~l~~~--gi~~~~vl~~GDs-~NDi~M~~~agv~gvav~NA 223 (421)
+-|+.+.+.++++++.. ..++++++++||- ..|+-|....|.++|.+.+.
T Consensus 114 ~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G~~tilv~~g 166 (168)
T PF09419_consen 114 AKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMGSYTILVTDG 166 (168)
T ss_pred CCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhccCceEEEEecC
Confidence 44666777777777321 1359999999995 89999999999888887654
No 228
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=67.26 E-value=21 Score=32.53 Aligned_cols=34 Identities=12% Similarity=0.102 Sum_probs=24.9
Q ss_pred HHHHHHHcCCcEEEEEcCCCHHHHHHHHHhCCCC
Q 014608 36 ALWEAHYRRDSLLVFSTGRSPTLYKQLRKEKPML 69 (421)
Q Consensus 36 al~~~l~~~g~~vviaTGRs~~~~~~l~~~~~~~ 69 (421)
.|...|++.|.+++++||-=...+.++..+++++
T Consensus 95 eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~ 128 (227)
T KOG1615|consen 95 ELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIP 128 (227)
T ss_pred HHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCc
Confidence 4444567788888888887777777777777764
No 229
>PF13577 SnoaL_4: SnoaL-like domain; PDB: 3S5C_B 3EJV_A 2RFR_A 3B8L_F 2CHC_A 3A76_A 3EF8_B.
Probab=66.17 E-value=57 Score=26.29 Aligned_cols=84 Identities=12% Similarity=-0.031 Sum_probs=58.8
Q ss_pred hHHHHHHHHHHHHhcccccCCHHHHHHHHhccCCCceEeCCC---CcccCHHHHHHHHHhhcCCCCCceEEEEEeeeEEe
Q 014608 285 HEVVKLYLFYERWRRAEIDNSEIYLSSLKANCCPSGFCVPPS---GGEISLAEAINQFRKCYGDKQGKQFRVWVDRVLST 361 (421)
Q Consensus 285 ~evv~~~~~~e~w~~~~~~~~~~~~~~l~~~~~p~~~~v~~~---G~~~~~~~~~~~~~~~~g~~~g~~~~i~vd~~~~~ 361 (421)
.+|.++...|..-+- ....+.+.+.|.|++++..++ |.....+++.+.++..+...+. .+-++....+.
T Consensus 7 ~~I~~l~~~~~~~~D------~~~~~~~~~lft~d~~~~~~~~~~~~~~G~~~i~~~~~~~~~~~~~--~~H~~~~~~v~ 78 (127)
T PF13577_consen 7 AAIRDLIARYARALD------TGDWEEWADLFTEDAVFDFPGFGFGRYRGRDAIRAFLRARFDGFAA--TRHMVTNPVVD 78 (127)
T ss_dssp HHHHHHHHHHHHHHH------TT-HHHHHTTEEEEEEEEETTTCEEEEESHHHHHHHHHHHHHHEEE--EEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHhh------CCCHHHHHhccCCcEEEEEeCccccccCCHHHHHHHHHHhcccccc--eeEEccceEEE
Confidence 456655555554443 345678899999999999987 5788899999999998765554 66666666544
Q ss_pred eeeCCeEEEEEeeeEE
Q 014608 362 EIGPGTWLVKFHKWEL 377 (421)
Q Consensus 362 ~~~~~~~~v~~~~~~~ 377 (421)
+.++++.++..-...
T Consensus 79 -~dgd~A~~~~~~~~~ 93 (127)
T PF13577_consen 79 -VDGDTATVRSYVLAT 93 (127)
T ss_dssp -EETTEEEEEEEEEEE
T ss_pred -EcCCEEEEEEEEEEE
Confidence 477888886554433
No 230
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=64.24 E-value=3.8 Score=36.92 Aligned_cols=16 Identities=31% Similarity=0.561 Sum_probs=11.7
Q ss_pred CeE-EEEeCCCCCCCCC
Q 014608 9 RLM-IVSDLDHTMVDHH 24 (421)
Q Consensus 9 ~kl-I~~DLDGTLl~~~ 24 (421)
+++ |++|+||||.+..
T Consensus 1 ~~i~I~iDiDgVLad~~ 17 (191)
T PF06941_consen 1 RKIRIAIDIDGVLADFN 17 (191)
T ss_dssp --EEEEEESBTTTB-HH
T ss_pred CCcEEEEECCCCCcccH
Confidence 367 9999999999874
No 231
>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]
Probab=63.89 E-value=23 Score=29.86 Aligned_cols=60 Identities=10% Similarity=0.047 Sum_probs=37.8
Q ss_pred CeEEEEeCCCCCCCCCC------CCCccHHHHHHHHHHHHcCCcEEEEEc-CCCHHHHHHHHHhCCC
Q 014608 9 RLMIVSDLDHTMVDHHD------AENLSLLRFNALWEAHYRRDSLLVFST-GRSPTLYKQLRKEKPM 68 (421)
Q Consensus 9 ~klI~~DLDGTLl~~~~------~~~~s~~~~~al~~~l~~~g~~vviaT-GRs~~~~~~l~~~~~~ 68 (421)
.+++.+|||+|+-+... .+..-......++..|+++|+.+++++ +=.+..+.+.++.+..
T Consensus 18 P~~vdthl~~pfkP~k~~~g~~g~e~~fY~Di~rIL~dLk~~GVtl~~ASRt~ap~iA~q~L~~fkv 84 (144)
T KOG4549|consen 18 PRLVDTHLDYPFKPFKCECGSKGEEMIFYDDIRRILVDLKKLGVTLIHASRTMAPQIASQGLETFKV 84 (144)
T ss_pred eEEEEecccccccccccCcccCcceeeeccchhHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHhcc
Confidence 46788888888866541 111111123455557899999999998 4455566666666543
No 232
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=61.70 E-value=5.5 Score=41.73 Aligned_cols=16 Identities=25% Similarity=0.378 Sum_probs=14.1
Q ss_pred CeEEEEeCCCCCCCCC
Q 014608 9 RLMIVSDLDHTMVDHH 24 (421)
Q Consensus 9 ~klI~~DLDGTLl~~~ 24 (421)
...++||+||||+.++
T Consensus 22 ~~~~~FDfDGTLt~~~ 37 (497)
T PLN02177 22 NQTVAADLDGTLLISR 37 (497)
T ss_pred ccEEEEecCCcccCCC
Confidence 5689999999999865
No 233
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=59.68 E-value=13 Score=36.44 Aligned_cols=57 Identities=19% Similarity=0.113 Sum_probs=37.5
Q ss_pred CCeEEEEeCCCCCCCCCCCCCccHHHHHHHHHHHHcC----CcEEEEEc--CCCHH--HHHHHHHhCCC
Q 014608 8 ARLMIVSDLDHTMVDHHDAENLSLLRFNALWEAHYRR----DSLLVFST--GRSPT--LYKQLRKEKPM 68 (421)
Q Consensus 8 ~~klI~~DLDGTLl~~~~~~~~s~~~~~al~~~l~~~----g~~vviaT--GRs~~--~~~~l~~~~~~ 68 (421)
+.--++||+||.|+..+.+..-+.. |+. .+.+. .+.+++.| |-..+ .+.++...++.
T Consensus 34 ~~fgfafDIDGVL~RG~~~i~~~~~---Alr-~L~~~~g~lkIP~vfLTNGGg~~E~~rA~~lS~~Lgv 98 (389)
T KOG1618|consen 34 PTFGFAFDIDGVLFRGHRPIPGALK---ALR-RLVDNQGQLKIPFVFLTNGGGILESSRAQELSALLGV 98 (389)
T ss_pred CceeEEEecccEEEecCCCCcchHH---HHH-HHHhcCCCeeccEEEEeCCCCcchhhHHHHHHHhhCC
Confidence 4567999999999988876544433 333 45555 68889988 44333 24556666654
No 234
>PF07366 SnoaL: SnoaL-like polyketide cyclase; InterPro: IPR009959 This domain is found in SnoaL [] a polyketide cyclase involved in nogalamycin biosynthesis. This domain was formerly known as DUF1486. It adopts a distorted alpha-beta barrel fold []. Structural data together with site-directed mutagenesis experiments have shown that SnoaL has a different mechanism to that of the classical aldolase for catalysing intramolecular aldol condensation [].; PDB: 2GEY_C 3F9S_A 2GEX_A 3EHC_B 2F99_D 2F98_D 1SJW_A 3K0Z_B.
Probab=58.60 E-value=77 Score=25.81 Aligned_cols=87 Identities=13% Similarity=0.106 Sum_probs=60.3
Q ss_pred HHHHHHhccCCCceEeCCC-CcccCHHHHHHHHHhhcCCCCCceEEEEEeeeEEeeeeCCeEEEEEeeeEEe-C------
Q 014608 308 YLSSLKANCCPSGFCVPPS-GGEISLAEAINQFRKCYGDKQGKQFRVWVDRVLSTEIGPGTWLVKFHKWELS-G------ 379 (421)
Q Consensus 308 ~~~~l~~~~~p~~~~v~~~-G~~~~~~~~~~~~~~~~g~~~g~~~~i~vd~~~~~~~~~~~~~v~~~~~~~~-~------ 379 (421)
.++.+...++|++....|. |.....++..+.++..+..-|. +++.|.++.. .+|..++++.=.=+. |
T Consensus 15 d~~~~~~~~~~d~~~~~~~~~~~~G~~~~~~~~~~~~~afPD--~~~~i~~~~~---~gd~v~~~~~~~Gth~g~~~g~~ 89 (126)
T PF07366_consen 15 DLDALDELVAPDVVFHDPGPGPPVGREGFKEFLKELRAAFPD--LRFEIEDVVA---EGDRVAVRWTFTGTHTGEFMGIP 89 (126)
T ss_dssp -GCHHHGTEEEEEEEEGCTTTEEEHHHHHHHHHHHHHHHSTT--TEEEEEEEEE---ETTEEEEEEEEEEEESSEBTTBE
T ss_pred CHHHHHHhcCCCEEEEecCCCCCCCHHHHHHHHHHHHHHCCC--CEEEEEEEEE---ECCEEEEEEEEEEeecCCcCCcC
Confidence 4466778899999999876 8899999999999999999999 8886665543 446677766544333 2
Q ss_pred -cceee-EEEEEEEEEeCCCCee
Q 014608 380 -EERAC-SIVSIIVRIKDASDHT 400 (421)
Q Consensus 380 -~~~~~-~~~t~~~~~~~~~~~~ 400 (421)
..+.. .....+++.+ .+++.
T Consensus 90 ptgk~v~~~~~~~~~~~-~gkI~ 111 (126)
T PF07366_consen 90 PTGKPVEFRGMSIFRFE-DGKIV 111 (126)
T ss_dssp -TTEEEEEEEEEEEEEE-TTEEE
T ss_pred CCCCEEEEEEEEEEEEE-CCEEE
Confidence 22333 3444555664 46554
No 235
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=58.45 E-value=19 Score=34.90 Aligned_cols=51 Identities=24% Similarity=0.228 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHhhCCCCCCcEEEEcCCc-CchhhhcCCCceEEEecCChHHHHH
Q 014608 176 KGQALAYLLRKFKCEGKVPTNTLVCGDSG-NDAELFSIPEVYGVMVSNAQEELLQ 229 (421)
Q Consensus 176 Kg~al~~L~~~l~~~gi~~~~vl~~GDs~-NDi~M~~~agv~gvav~NA~~elk~ 229 (421)
-.....+|++++ +|+|++|++|||.. .|+-.-+.+|+-.+.|-..-..+.+
T Consensus 226 ~~~m~~~l~~~~---~i~psRt~mvGDRL~TDIlFG~~~G~~TLLvltGv~~led 277 (306)
T KOG2882|consen 226 STFMFEYLLEKF---NIDPSRTCMVGDRLDTDILFGKNCGFKTLLVLSGVTTLED 277 (306)
T ss_pred CHHHHHHHHHHc---CCCcceEEEEcccchhhhhHhhccCcceEEEecCcCcHHH
Confidence 345678899999 99999999999984 5888888888666666555444433
No 236
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=56.87 E-value=7.7 Score=43.27 Aligned_cols=32 Identities=25% Similarity=0.499 Sum_probs=28.4
Q ss_pred CcEEEEcCCcCchhhhcCCCceEEEecCChHHH
Q 014608 195 TNTLVCGDSGNDAELFSIPEVYGVMVSNAQEEL 227 (421)
Q Consensus 195 ~~vl~~GDs~NDi~M~~~agv~gvav~NA~~el 227 (421)
--+.+|||+.||=.+++.|+ .|+..+.|.-.+
T Consensus 853 y~VgfCGDGANDCgALKaAd-vGISLSeaEASv 884 (1140)
T KOG0208|consen 853 YKVGFCGDGANDCGALKAAD-VGISLSEAEASV 884 (1140)
T ss_pred cEEEecCCCcchhhhhhhcc-cCcchhhhhHhh
Confidence 47999999999999999999 699988887666
No 237
>PF10678 DUF2492: Protein of unknown function (DUF2492); InterPro: IPR019620 This entry describes a family of small cytosolic proteins, about 80 amino acids in length, in which the eight invariant residues include three His residues and two Cys residues. Two pairs of these invariant residues occur in motifs HxH (where x is A or G) and CxH, both of which suggest metal-binding activity. This protein family was identified by searching with a phylogenetic profile based on an anaerobic sulphatase-maturase enzyme, which contains multiple 4Fe-4S clusters. The linkages by phylogenetic profiling and by iron-sulphur cluster-related motifs together suggest this protein may be an accessory protein to certain maturases in sulphatase/maturase systems.
Probab=56.59 E-value=48 Score=25.44 Aligned_cols=39 Identities=5% Similarity=-0.016 Sum_probs=33.2
Q ss_pred cCCHHH-HHHHHhccCCCceEeCCCCcccCHHHHHHHHHh
Q 014608 303 DNSEIY-LSSLKANCCPSGFCVPPSGGEISLAEAINQFRK 341 (421)
Q Consensus 303 ~~~~~~-~~~l~~~~~p~~~~v~~~G~~~~~~~~~~~~~~ 341 (421)
+-+.+. .+...+.|..+-.+-+=|+..++.++|+++|.+
T Consensus 19 ~~t~~~L~~ai~~~FG~~arFhTCSae~m~a~eLv~FL~~ 58 (78)
T PF10678_consen 19 PYTKEELKAAIIEKFGEDARFHTCSAEGMTADELVDFLEE 58 (78)
T ss_pred CcCHHHHHHHHHHHhCCCceEEecCCCCCCHHHHHHHHHH
Confidence 334444 478899999999999999999999999999975
No 238
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=55.55 E-value=21 Score=33.07 Aligned_cols=46 Identities=20% Similarity=0.213 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHhhCCCC-CCcEEEEcCCcCchhhhcCCCceEEEecCCh
Q 014608 176 KGQALAYLLRKFKCEGKV-PTNTLVCGDSGNDAELFSIPEVYGVMVSNAQ 224 (421)
Q Consensus 176 Kg~al~~L~~~l~~~gi~-~~~vl~~GDs~NDi~M~~~agv~gvav~NA~ 224 (421)
-..|.+..++.. |++ |.++++|-||.+-+.-.+.+|+..+.++-+.
T Consensus 162 ~~~afE~a~k~a---gi~~p~~t~FfDDS~~NI~~ak~vGl~tvlv~~~~ 208 (244)
T KOG3109|consen 162 SEEAFEKAMKVA---GIDSPRNTYFFDDSERNIQTAKEVGLKTVLVGREH 208 (244)
T ss_pred CHHHHHHHHHHh---CCCCcCceEEEcCchhhHHHHHhccceeEEEEeee
Confidence 467888889988 998 9999999999999999999998888776554
No 239
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=55.29 E-value=8.4 Score=35.67 Aligned_cols=19 Identities=32% Similarity=0.747 Sum_probs=16.5
Q ss_pred cCCCeEEEEeCCCCCCCCC
Q 014608 6 AAARLMIVSDLDHTMVDHH 24 (421)
Q Consensus 6 ~~~~klI~~DLDGTLl~~~ 24 (421)
++++.+++||+|-|+++.+
T Consensus 10 ~~~ril~~FDFD~TIid~d 28 (256)
T KOG3120|consen 10 SSPRILLVFDFDRTIIDQD 28 (256)
T ss_pred cCCcEEEEEecCceeecCC
Confidence 3578999999999999876
No 240
>PRK02228 V-type ATP synthase subunit F; Provisional
Probab=54.67 E-value=25 Score=28.28 Aligned_cols=64 Identities=9% Similarity=0.017 Sum_probs=45.8
Q ss_pred cEEEEcCCcCchhhhcCCCceEEEecCChHHHHHHHHhhc-CCCCceeeccCCCccHHHHHHHHhh
Q 014608 196 NTLVCGDSGNDAELFSIPEVYGVMVSNAQEELLQWHAANA-KNNPKLTHATERCAAGIIQAIGHFK 260 (421)
Q Consensus 196 ~vl~~GDs~NDi~M~~~agv~gvav~NA~~elk~~a~~v~-~~~~~~~~~~~~~~~GV~~~l~~~~ 260 (421)
.+.++|| ..-+..|+.+|+-++.+....+++++.-...+ ..+-.++..++.....+.+.+.+..
T Consensus 2 kIaVIGD-~dtv~GFrLaGi~~~~~~~~~ee~~~~l~~l~~~~d~gII~Ite~~~~~i~e~i~~~~ 66 (100)
T PRK02228 2 EIAVIGS-PEFTTGFRLAGIRKVYEVPDDEKLDEAVEEVLEDDDVGILVMHDDDLEKLPRRLRRTL 66 (100)
T ss_pred EEEEEeC-HHHHHHHHHcCCceEEeeCCHHHHHHHHHHHhhCCCEEEEEEehhHhHhhHHHHHHHH
Confidence 4789999 88888999999655665555666766555553 4444567788877788888887743
No 241
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=50.74 E-value=37 Score=30.34 Aligned_cols=41 Identities=15% Similarity=0.072 Sum_probs=30.6
Q ss_pred HHHHHHHcCCcEEEEEcCCCHHHHHHHHHhCCCC-CCCEEEE
Q 014608 36 ALWEAHYRRDSLLVFSTGRSPTLYKQLRKEKPML-TPDITIM 76 (421)
Q Consensus 36 al~~~l~~~g~~vviaTGRs~~~~~~l~~~~~~~-~~d~~I~ 76 (421)
.+++.|+++|+.++++||++...+..+.+.+++. .++.+++
T Consensus 113 ~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~~~~ 154 (197)
T TIGR01548 113 GLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPVQIW 154 (197)
T ss_pred HHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCCEEEe
Confidence 4444577789999999999988888888888863 2454444
No 242
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=50.14 E-value=32 Score=32.21 Aligned_cols=41 Identities=15% Similarity=0.183 Sum_probs=30.1
Q ss_pred HHHHHHcCCcEEEEEcCCCHHHHHHHHHhCCCCC--CCEEEEc
Q 014608 37 LWEAHYRRDSLLVFSTGRSPTLYKQLRKEKPMLT--PDITIMS 77 (421)
Q Consensus 37 l~~~l~~~g~~vviaTGRs~~~~~~l~~~~~~~~--~d~~I~~ 77 (421)
+++.|+++|+.++++|+.+...+..+.+.+++.. ++.++++
T Consensus 107 ~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~ii~~ 149 (253)
T TIGR01422 107 VIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYNVTT 149 (253)
T ss_pred HHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceEEcc
Confidence 4556778899999999999888888877776543 2554443
No 243
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=49.94 E-value=41 Score=31.48 Aligned_cols=41 Identities=10% Similarity=-0.142 Sum_probs=30.2
Q ss_pred HHHHHHcCCcEEEEEcCCCHHHHHHHHHhCCCCC-CCEEEEc
Q 014608 37 LWEAHYRRDSLLVFSTGRSPTLYKQLRKEKPMLT-PDITIMS 77 (421)
Q Consensus 37 l~~~l~~~g~~vviaTGRs~~~~~~l~~~~~~~~-~d~~I~~ 77 (421)
+++.|+++|++++|+|+.+...+....+.+++.. ++.+++.
T Consensus 116 ~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~iv~~ 157 (248)
T PLN02770 116 LKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQAVIIG 157 (248)
T ss_pred HHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcEEEec
Confidence 3344567899999999999888888888887643 4555554
No 244
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=49.91 E-value=27 Score=32.57 Aligned_cols=34 Identities=15% Similarity=-0.007 Sum_probs=27.6
Q ss_pred HHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCC
Q 014608 178 QALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPE 214 (421)
Q Consensus 178 ~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~ag 214 (421)
..+..+++++ +++++.++++||+.+|+..+..++
T Consensus 82 ~~l~~~~~~~---~~~~~~~~~vGd~~~d~~~~~~~~ 115 (242)
T TIGR01459 82 QMILESKKRF---DIRNGIIYLLGHLENDIINLMQCY 115 (242)
T ss_pred HHHHhhhhhc---cCCCceEEEeCCcccchhhhcCCC
Confidence 4566666777 888999999999999999887655
No 245
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=49.70 E-value=36 Score=30.91 Aligned_cols=41 Identities=10% Similarity=0.075 Sum_probs=30.3
Q ss_pred HHHHHHcCCcEEEEEcCCCHHHHHHHHHhCCCC---CCCEEEEc
Q 014608 37 LWEAHYRRDSLLVFSTGRSPTLYKQLRKEKPML---TPDITIMS 77 (421)
Q Consensus 37 l~~~l~~~g~~vviaTGRs~~~~~~l~~~~~~~---~~d~~I~~ 77 (421)
+++.++++|+.++++|+.+...+....+.+++. .++.+++.
T Consensus 95 ~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~ 138 (220)
T TIGR03351 95 AFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCP 138 (220)
T ss_pred HHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcC
Confidence 344567789999999999988888888877763 24555553
No 246
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=49.43 E-value=15 Score=34.83 Aligned_cols=39 Identities=23% Similarity=0.510 Sum_probs=32.9
Q ss_pred EecCCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhh
Q 014608 169 ILPQGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELF 210 (421)
Q Consensus 169 I~p~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~ 210 (421)
+.-.+.+||.++..+++++ |..|+.++++-|+...+.-+
T Consensus 156 lft~~~~KG~~L~~fL~~~---~~~pk~IIfIDD~~~nl~sv 194 (252)
T PF11019_consen 156 LFTGGQDKGEVLKYFLDKI---NQSPKKIIFIDDNKENLKSV 194 (252)
T ss_pred EEeCCCccHHHHHHHHHHc---CCCCCeEEEEeCCHHHHHHH
Confidence 4567899999999999999 99999999999986665533
No 247
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=48.89 E-value=26 Score=30.66 Aligned_cols=17 Identities=35% Similarity=0.432 Sum_probs=14.3
Q ss_pred CeEEEEeCCCCCCCCCC
Q 014608 9 RLMIVSDLDHTMVDHHD 25 (421)
Q Consensus 9 ~klI~~DLDGTLl~~~~ 25 (421)
++.+++|||+||+.+..
T Consensus 1 k~~lvlDLDeTLi~~~~ 17 (162)
T TIGR02251 1 KKTLVLDLDETLVHSTF 17 (162)
T ss_pred CcEEEEcCCCCcCCCCC
Confidence 36799999999998853
No 248
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=47.92 E-value=29 Score=32.22 Aligned_cols=22 Identities=18% Similarity=0.191 Sum_probs=17.9
Q ss_pred ccCCCeEEEEeCCCCCCCCCCC
Q 014608 5 SAAARLMIVSDLDHTMVDHHDA 26 (421)
Q Consensus 5 ~~~~~klI~~DLDGTLl~~~~~ 26 (421)
+..+.++++||||.||......
T Consensus 11 ~~~~~~~l~FDiDdtLYp~St~ 32 (244)
T KOG3109|consen 11 SGPNYKCLFFDIDDTLYPLSTG 32 (244)
T ss_pred CCccceEEEEecccccccCchh
Confidence 3457899999999999987643
No 249
>PRK01395 V-type ATP synthase subunit F; Provisional
Probab=46.61 E-value=43 Score=27.19 Aligned_cols=63 Identities=21% Similarity=0.137 Sum_probs=43.3
Q ss_pred CcEEEEcCCcCchhhhcCCCceEEEecCChHHHHHHHHhhcCCCCceeeccCCCccHHHHHHHHh
Q 014608 195 TNTLVCGDSGNDAELFSIPEVYGVMVSNAQEELLQWHAANAKNNPKLTHATERCAAGIIQAIGHF 259 (421)
Q Consensus 195 ~~vl~~GDs~NDi~M~~~agv~gvav~NA~~elk~~a~~v~~~~~~~~~~~~~~~~GV~~~l~~~ 259 (421)
..+.++|| ..-+--|+.+|+-++.+ +..+++++.-......+-.++..++....-+-+.|.++
T Consensus 4 ~kIaVIGD-~dtv~GFrLaGi~~~~v-~~~ee~~~~i~~l~~~d~gII~Ite~~a~~i~~~i~~~ 66 (104)
T PRK01395 4 YKIGVVGD-KDSILPFKALGIDVFPV-IDEQEAINTLRKLAMEDYGIIYITEQIAADIPETIERY 66 (104)
T ss_pred eeEEEEEC-HHHHHHHHHcCCeeEEe-cChHHHHHHHHHHhcCCcEEEEEcHHHHHHhHHHHHHh
Confidence 36899999 88888999999655555 44466665555555544456777776666676766666
No 250
>KOG1605 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=46.56 E-value=14 Score=35.29 Aligned_cols=19 Identities=37% Similarity=0.524 Sum_probs=16.2
Q ss_pred cCCCeEEEEeCCCCCCCCC
Q 014608 6 AAARLMIVSDLDHTMVDHH 24 (421)
Q Consensus 6 ~~~~klI~~DLDGTLl~~~ 24 (421)
..++|.+++|||.||+.+.
T Consensus 86 ~~~kk~lVLDLDeTLvHss 104 (262)
T KOG1605|consen 86 TVGRKTLVLDLDETLVHSS 104 (262)
T ss_pred cCCCceEEEeCCCcccccc
Confidence 4468999999999998776
No 251
>PLN02499 glycerol-3-phosphate acyltransferase
Probab=46.32 E-value=13 Score=38.80 Aligned_cols=38 Identities=16% Similarity=0.150 Sum_probs=28.9
Q ss_pred CCCHHHH-HHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCC
Q 014608 173 GAGKGQA-LAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPE 214 (421)
Q Consensus 173 g~sKg~a-l~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~ag 214 (421)
|.+.++- ++.+.+.+ | +....+.+||+..|-..++.+.
T Consensus 154 G~n~~ek~~~rl~~~~---g-~~~~~vg~~~~~~~~~f~~~ck 192 (498)
T PLN02499 154 GTDVDQSVANRVANLF---V-DERPQLGLGRISASSSFLSLCK 192 (498)
T ss_pred cCccHHHHHHHHHHHh---C-ccCceecccCCcccchhhhhCc
Confidence 5555555 66777777 5 3456899999999999999987
No 252
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=45.95 E-value=1.1e+02 Score=24.61 Aligned_cols=67 Identities=21% Similarity=0.336 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHhcC---CcEEEEEEcCeeEEEecCCC--CHHHHHHHHHHHHhhCCCCCCcEEEEcCC-cCchhhhc
Q 014608 140 QTVTQKLSEIFKNRG---LDVKIIYSGGMDLDILPQGA--GKGQALAYLLRKFKCEGKVPTNTLVCGDS-GNDAELFS 211 (421)
Q Consensus 140 ~~~~~~l~~~l~~~~---~~~~v~~s~~~~ldI~p~g~--sKg~al~~L~~~l~~~gi~~~~vl~~GDs-~NDi~M~~ 211 (421)
-++...+.+.+...+ ..+..-..+.....+...+. -|-..|+.+++.+ +....+.|||| .-|.+...
T Consensus 10 wnly~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~~~~~~~~~K~~~i~~i~~~f-----P~~kfiLIGDsgq~DpeiY~ 82 (100)
T PF09949_consen 10 WNLYPFLRDFLRRNGFPAGPLLLRDYGPSLSGLFKSGAEEHKRDNIERILRDF-----PERKFILIGDSGQHDPEIYA 82 (100)
T ss_pred HHHHHHHHHHHHhcCCCCCceEcccCCccccccccCCchhHHHHHHHHHHHHC-----CCCcEEEEeeCCCcCHHHHH
Confidence 445566666665431 11222222233334444433 6999999999988 77899999996 55766544
No 253
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=45.07 E-value=81 Score=28.50 Aligned_cols=47 Identities=15% Similarity=0.128 Sum_probs=39.8
Q ss_pred eEEEecCCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCc
Q 014608 166 DLDILPQGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEV 215 (421)
Q Consensus 166 ~ldI~p~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv 215 (421)
++|..-....-.+.-..+++.. |++|.++++.-|..+-+...+.+|+
T Consensus 152 yfDttiG~KrE~~SY~kIa~~i---Gl~p~eilFLSDn~~EL~AA~~vGl 198 (229)
T COG4229 152 YFDTTIGKKRESQSYAKIAGDI---GLPPAEILFLSDNPEELKAAAGVGL 198 (229)
T ss_pred eeeccccccccchhHHHHHHhc---CCCchheEEecCCHHHHHHHHhcch
Confidence 5677665556677788999999 9999999999999999999998884
No 254
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=44.96 E-value=40 Score=28.61 Aligned_cols=41 Identities=20% Similarity=0.055 Sum_probs=31.1
Q ss_pred HHHHHHcCCcEEEEEcCCCHHHHHHHHHhCCCC-CCCEEEEc
Q 014608 37 LWEAHYRRDSLLVFSTGRSPTLYKQLRKEKPML-TPDITIMS 77 (421)
Q Consensus 37 l~~~l~~~g~~vviaTGRs~~~~~~l~~~~~~~-~~d~~I~~ 77 (421)
+++.++++|+.++++|+.+...+....+.+++. .++.++++
T Consensus 85 ~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i~~~ 126 (176)
T PF13419_consen 85 LLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDEIISS 126 (176)
T ss_dssp HHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSEEEEG
T ss_pred hhhhcccccceeEEeecCCccccccccccccccccccccccc
Confidence 444567799999999999988888888888864 35655554
No 255
>PRK11590 hypothetical protein; Provisional
Probab=44.91 E-value=59 Score=29.57 Aligned_cols=38 Identities=24% Similarity=0.182 Sum_probs=28.2
Q ss_pred HHHcCCcEEEEEcCCCHHHHHHHHHhCCCCCCCEEEEc
Q 014608 40 AHYRRDSLLVFSTGRSPTLYKQLRKEKPMLTPDITIMS 77 (421)
Q Consensus 40 ~l~~~g~~vviaTGRs~~~~~~l~~~~~~~~~d~~I~~ 77 (421)
.+++.|+.++++|+.+...++++...++....+.+||.
T Consensus 107 ~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~~~~i~t 144 (211)
T PRK11590 107 YLLSSDADVWLITGSPQPLVEQVYFDTPWLPRVNLIAS 144 (211)
T ss_pred HHHhCCCEEEEEeCCcHHHHHHHHHHccccccCceEEE
Confidence 34567999999999998888889888874323445554
No 256
>PF14343 PrcB_C: PrcB C-terminal
Probab=44.60 E-value=48 Score=23.82 Aligned_cols=34 Identities=26% Similarity=0.297 Sum_probs=28.5
Q ss_pred hcCCCCCceEEEEEeeeEEeeeeCCeEEEEEeeeEEe
Q 014608 342 CYGDKQGKQFRVWVDRVLSTEIGPGTWLVKFHKWELS 378 (421)
Q Consensus 342 ~~g~~~g~~~~i~vd~~~~~~~~~~~~~v~~~~~~~~ 378 (421)
.+|.||...+.|.|+++ ...++.+.|.+.+.+-.
T Consensus 7 ~~G~kptgGY~I~v~~v---~~~~~~i~V~~~~~~P~ 40 (60)
T PF14343_consen 7 FYGEKPTGGYSIEVESV---EETENTIVVYVKLTEPA 40 (60)
T ss_pred EeccccCCCEEEEEEEE---EEeCCEEEEEEEEECCC
Confidence 47888888899999888 55699999999988776
No 257
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=44.30 E-value=50 Score=29.65 Aligned_cols=31 Identities=16% Similarity=0.089 Sum_probs=21.6
Q ss_pred HHHHcCCcEEEEEcCCCHHHHHHHHHhCCCC
Q 014608 39 EAHYRRDSLLVFSTGRSPTLYKQLRKEKPML 69 (421)
Q Consensus 39 ~~l~~~g~~vviaTGRs~~~~~~l~~~~~~~ 69 (421)
+.|+++|++++++|+.+...+....+.+++.
T Consensus 85 ~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~ 115 (205)
T TIGR01454 85 AELRADGVGTAIATGKSGPRARSLLEALGLL 115 (205)
T ss_pred HHHHHCCCeEEEEeCCchHHHHHHHHHcCCh
Confidence 3455678888888887776666666766653
No 258
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=43.80 E-value=57 Score=29.26 Aligned_cols=39 Identities=15% Similarity=0.041 Sum_probs=27.9
Q ss_pred HHHHHcCCcEEEEEcCCCHHHHHHHHHhCCCCC-CCEEEE
Q 014608 38 WEAHYRRDSLLVFSTGRSPTLYKQLRKEKPMLT-PDITIM 76 (421)
Q Consensus 38 ~~~l~~~g~~vviaTGRs~~~~~~l~~~~~~~~-~d~~I~ 76 (421)
++.++++|++++++|+.+...+..+.+.+++.. ++.+++
T Consensus 94 L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~ 133 (213)
T TIGR01449 94 LGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSVLIG 133 (213)
T ss_pred HHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcEEEe
Confidence 345677899999999988777788888777632 444443
No 259
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=43.58 E-value=54 Score=29.67 Aligned_cols=33 Identities=9% Similarity=-0.123 Sum_probs=26.5
Q ss_pred HHHHHHcCCcEEEEEcCCCHHHHHHHHHhCCCC
Q 014608 37 LWEAHYRRDSLLVFSTGRSPTLYKQLRKEKPML 69 (421)
Q Consensus 37 l~~~l~~~g~~vviaTGRs~~~~~~l~~~~~~~ 69 (421)
+++.|+++|+.++++|+.+...+....+.+++.
T Consensus 90 ~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~ 122 (214)
T PRK13288 90 TLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLD 122 (214)
T ss_pred HHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCh
Confidence 444677889999999999888788888888764
No 260
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=43.57 E-value=47 Score=31.81 Aligned_cols=33 Identities=18% Similarity=0.199 Sum_probs=26.7
Q ss_pred CCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhc
Q 014608 172 QGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFS 211 (421)
Q Consensus 172 ~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~ 211 (421)
...+|....+.+.+.+ +| +++|||..+|+.-+.
T Consensus 173 ~~~~K~~rr~~I~~~y---~I----vl~vGD~~~Df~~~~ 205 (266)
T TIGR01533 173 DKSSKESRRQKVQKDY---EI----VLLFGDNLLDFDDFF 205 (266)
T ss_pred CCCCcHHHHHHHHhcC---CE----EEEECCCHHHhhhhh
Confidence 3467998888888877 66 999999999996544
No 261
>PRK10463 hydrogenase nickel incorporation protein HypB; Provisional
Probab=42.71 E-value=1.2e+02 Score=29.59 Aligned_cols=69 Identities=20% Similarity=0.306 Sum_probs=46.5
Q ss_pred HHHHHHHHHHhcCCcEEEEEEcCeeEEEe-cCCCCHHHHHHHHHHHHhhCCCCCCcEEEEcC--CcCchhhhcCCCceEE
Q 014608 142 VTQKLSEIFKNRGLDVKIIYSGGMDLDIL-PQGAGKGQALAYLLRKFKCEGKVPTNTLVCGD--SGNDAELFSIPEVYGV 218 (421)
Q Consensus 142 ~~~~l~~~l~~~~~~~~v~~s~~~~ldI~-p~g~sKg~al~~L~~~l~~~gi~~~~vl~~GD--s~NDi~M~~~agv~gv 218 (421)
.....++.|.+. +...+.|+ +.|+.|-+=+..+++.+ .-...-.+..|| +.||.+.++..|+.++
T Consensus 91 ~a~~~r~~~~~~---------~~~~v~l~G~pGsGKTTLl~~l~~~l---~~~~~~~VI~gD~~t~~Da~rI~~~g~pvv 158 (290)
T PRK10463 91 LAERNRARFAAR---------KQLVLNLVSSPGSGKTTLLTETLMRL---KDSVPCAVIEGDQQTVNDAARIRATGTPAI 158 (290)
T ss_pred HHHHHHHHHHhc---------CCeEEEEECCCCCCHHHHHHHHHHHh---ccCCCEEEECCCcCcHHHHHHHHhcCCcEE
Confidence 345556666543 23344555 68999999999999998 333455666777 5679999988885555
Q ss_pred EecC
Q 014608 219 MVSN 222 (421)
Q Consensus 219 av~N 222 (421)
-+.+
T Consensus 159 qi~t 162 (290)
T PRK10463 159 QVNT 162 (290)
T ss_pred EecC
Confidence 5544
No 262
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=42.69 E-value=67 Score=29.42 Aligned_cols=37 Identities=14% Similarity=0.048 Sum_probs=27.2
Q ss_pred HHHcCCcEEEEEcCCCHHHHHHHHHhCCCCCCCEEEE
Q 014608 40 AHYRRDSLLVFSTGRSPTLYKQLRKEKPMLTPDITIM 76 (421)
Q Consensus 40 ~l~~~g~~vviaTGRs~~~~~~l~~~~~~~~~d~~I~ 76 (421)
.++++|..++++|+.+...++++.+..++...+.+||
T Consensus 106 ~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~~~i~ 142 (210)
T TIGR01545 106 YLESSDADIWLITGSPQPLVEAVYFDSNFIHRLNLIA 142 (210)
T ss_pred HHHhCCCEEEEEcCCcHHHHHHHHHhccccccCcEEE
Confidence 3455899999999999888888888766533334454
No 263
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=42.58 E-value=14 Score=33.11 Aligned_cols=80 Identities=23% Similarity=0.335 Sum_probs=44.3
Q ss_pred CceEEEEEEcc--cchHHHHHHHHHHHHhcCCcEEEEEEcCeeEEEecCCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCC
Q 014608 126 RPHKVSFYVDK--DKAQTVTQKLSEIFKNRGLDVKIIYSGGMDLDILPQGAGKGQALAYLLRKFKCEGKVPTNTLVCGDS 203 (421)
Q Consensus 126 ~~~ki~~~~~~--~~~~~~~~~l~~~l~~~~~~~~v~~s~~~~ldI~p~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs 203 (421)
+..++.|+... .+.+.+.+.|.+.|.-.... -+.+.|..- .|-..+|-..|+. ..--+.-|||
T Consensus 129 RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~-pv~f~Gdk~---k~~qy~Kt~~i~~-----------~~~~IhYGDS 193 (237)
T COG3700 129 RGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMN-PVIFAGDKP---KPGQYTKTQWIQD-----------KNIRIHYGDS 193 (237)
T ss_pred cCCeEEEEecCCCCcccccchhHHhhcccCCCc-ceeeccCCC---CcccccccHHHHh-----------cCceEEecCC
Confidence 34466666532 23344445555554321111 123343322 3455566554432 1335889999
Q ss_pred cCchhhhcCCCceEEEe
Q 014608 204 GNDAELFSIPEVYGVMV 220 (421)
Q Consensus 204 ~NDi~M~~~agv~gvav 220 (421)
.||+...+.+|+.|+-.
T Consensus 194 D~Di~AAkeaG~RgIRi 210 (237)
T COG3700 194 DNDITAAKEAGARGIRI 210 (237)
T ss_pred chhhhHHHhcCccceeE
Confidence 99999999999877754
No 264
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=41.99 E-value=61 Score=29.71 Aligned_cols=40 Identities=18% Similarity=0.042 Sum_probs=31.3
Q ss_pred HHHHHHcCCcEEEEEcCCCHHHHHHHHHhCCCCC-CCEEEE
Q 014608 37 LWEAHYRRDSLLVFSTGRSPTLYKQLRKEKPMLT-PDITIM 76 (421)
Q Consensus 37 l~~~l~~~g~~vviaTGRs~~~~~~l~~~~~~~~-~d~~I~ 76 (421)
+++.++++|+.++++|+++...+..+.+.+++.. ++.+++
T Consensus 97 ~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g 137 (220)
T COG0546 97 LLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVG 137 (220)
T ss_pred HHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEc
Confidence 4456788999999999999999999999888743 344444
No 265
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=41.42 E-value=44 Score=35.65 Aligned_cols=57 Identities=19% Similarity=0.176 Sum_probs=41.5
Q ss_pred CeEEEEeCCCCCCCCC---CCCCccHHHHHHHHHHHHcCCcEEEEEcCCCHHHHHHHHHhCCC
Q 014608 9 RLMIVSDLDHTMVDHH---DAENLSLLRFNALWEAHYRRDSLLVFSTGRSPTLYKQLRKEKPM 68 (421)
Q Consensus 9 ~klI~~DLDGTLl~~~---~~~~~s~~~~~al~~~l~~~g~~vviaTGRs~~~~~~l~~~~~~ 68 (421)
...++++.||+++.-- ++ ... ....+.+.|++.|+.++++||.+...+..+.+.+++
T Consensus 385 ~~~~~~~~~~~~~g~~~~~d~--l~~-~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi 444 (562)
T TIGR01511 385 STSVLVAVNGELAGVFALEDQ--LRP-EAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGI 444 (562)
T ss_pred CEEEEEEECCEEEEEEEeccc--ccH-HHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCC
Confidence 4678889999985431 11 111 133444478889999999999999999999999886
No 266
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=41.33 E-value=63 Score=31.17 Aligned_cols=45 Identities=4% Similarity=0.166 Sum_probs=33.4
Q ss_pred HHHHHHHHcCCcEEEEEcCCCHHHHHHHHHhCCCCCCCEEEEccC
Q 014608 35 NALWEAHYRRDSLLVFSTGRSPTLYKQLRKEKPMLTPDITIMSVG 79 (421)
Q Consensus 35 ~al~~~l~~~g~~vviaTGRs~~~~~~l~~~~~~~~~d~~I~~nG 79 (421)
..+.+.|+++|++++++||-....+..+.+.+++..+...|.+|-
T Consensus 127 ~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~ 171 (277)
T TIGR01544 127 ENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNF 171 (277)
T ss_pred HHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeee
Confidence 345567788999999999888888888888888754544554443
No 267
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=40.82 E-value=52 Score=31.97 Aligned_cols=54 Identities=17% Similarity=-0.009 Sum_probs=39.6
Q ss_pred CeEEEEeCCCCCCCCCCCCCccHHHHHHHHHHHHcCCcEEEEEcCCCHHHHHHHHHhC
Q 014608 9 RLMIVSDLDHTMVDHHDAENLSLLRFNALWEAHYRRDSLLVFSTGRSPTLYKQLRKEK 66 (421)
Q Consensus 9 ~klI~~DLDGTLl~~~~~~~~s~~~~~al~~~l~~~g~~vviaTGRs~~~~~~l~~~~ 66 (421)
.-.++||=||.|..-.....-+...++ +|++.|-.++++|-.|..+.+++.+.+
T Consensus 22 ~DtfifDcDGVlW~g~~~ipGs~e~l~----~L~~~gK~i~fvTNNStksr~~y~kK~ 75 (306)
T KOG2882|consen 22 FDTFIFDCDGVLWLGEKPIPGSPEALN----LLKSLGKQIIFVTNNSTKSREQYMKKF 75 (306)
T ss_pred cCEEEEcCCcceeecCCCCCChHHHHH----HHHHcCCcEEEEeCCCcchHHHHHHHH
Confidence 567999999999986665555544454 456788999999988777666666543
No 268
>PRK00748 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Validated
Probab=40.54 E-value=2.9e+02 Score=25.27 Aligned_cols=50 Identities=26% Similarity=0.241 Sum_probs=33.1
Q ss_pred EecCCCCHH---HHHHHHHHHHhhCCCCCCcEEEEcC--CcCchhhhcCCC-ceEEEecCCh
Q 014608 169 ILPQGAGKG---QALAYLLRKFKCEGKVPTNTLVCGD--SGNDAELFSIPE-VYGVMVSNAQ 224 (421)
Q Consensus 169 I~p~g~sKg---~al~~L~~~l~~~gi~~~~vl~~GD--s~NDi~M~~~ag-v~gvav~NA~ 224 (421)
+...+..+| ..++.+++.. + -.+++.|+ +..|+..+...| +.+|+++.|-
T Consensus 168 ~~~~g~~~G~d~~~i~~l~~~~---~---ipvia~GGi~~~~di~~~~~~g~~~gv~vg~a~ 223 (233)
T PRK00748 168 ISRDGTLSGPNVEATRELAAAV---P---IPVIASGGVSSLDDIKALKGLGAVEGVIVGRAL 223 (233)
T ss_pred ecCcCCcCCCCHHHHHHHHHhC---C---CCEEEeCCCCCHHHHHHHHHcCCccEEEEEHHH
Confidence 334444444 4556665554 3 56999997 566888777766 7899988763
No 269
>PRK11587 putative phosphatase; Provisional
Probab=40.18 E-value=68 Score=29.20 Aligned_cols=17 Identities=35% Similarity=0.294 Sum_probs=14.9
Q ss_pred CCeEEEEeCCCCCCCCC
Q 014608 8 ARLMIVSDLDHTMVDHH 24 (421)
Q Consensus 8 ~~klI~~DLDGTLl~~~ 24 (421)
+++.|+||+||||+++.
T Consensus 2 ~~k~viFDlDGTL~Ds~ 18 (218)
T PRK11587 2 RCKGFLFDLDGTLVDSL 18 (218)
T ss_pred CCCEEEEcCCCCcCcCH
Confidence 46899999999999974
No 270
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=39.95 E-value=68 Score=30.48 Aligned_cols=41 Identities=7% Similarity=0.086 Sum_probs=29.5
Q ss_pred HHHHHHcCCcEEEEEcCCCHHHHHHHHHhCCCCC-CCEEEEc
Q 014608 37 LWEAHYRRDSLLVFSTGRSPTLYKQLRKEKPMLT-PDITIMS 77 (421)
Q Consensus 37 l~~~l~~~g~~vviaTGRs~~~~~~l~~~~~~~~-~d~~I~~ 77 (421)
+++.|+++|+.++++|+.+...+..+.+.+++.. ++.++++
T Consensus 117 ~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~ii~~ 158 (260)
T PLN03243 117 FVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVVLAA 158 (260)
T ss_pred HHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEEEec
Confidence 3345667899999999998887888888877642 4555553
No 271
>TIGR02960 SigX5 RNA polymerase sigma-70 factor, TIGR02960 family. This group of sigma factors are members of the sigma-70 family (TIGR02937). They and appear by homology, tree building, bidirectional best hits and one-to-a-genome distribution, to represent a conserved family.
Probab=39.59 E-value=3.6e+02 Score=26.05 Aligned_cols=69 Identities=10% Similarity=-0.012 Sum_probs=48.0
Q ss_pred HHHHHHHhcccccCCHHHHHHHHhccCCCceEeCCC--CcccCHHHHHHHHHhh--cCCCCCceEEEEEeeeEEeeeeCC
Q 014608 291 YLFYERWRRAEIDNSEIYLSSLKANCCPSGFCVPPS--GGEISLAEAINQFRKC--YGDKQGKQFRVWVDRVLSTEIGPG 366 (421)
Q Consensus 291 ~~~~e~w~~~~~~~~~~~~~~l~~~~~p~~~~v~~~--G~~~~~~~~~~~~~~~--~g~~~g~~~~i~vd~~~~~~~~~~ 366 (421)
..+++.|-.| .++.|.+.++|+.+...|- |...-.+++..+|+.. ...-+| ++... .-..++
T Consensus 211 ~~~~~a~~~g-------D~~~l~~Lla~Dv~~~~p~~~~~~~G~~~v~~~~~~~~~~~~~~~--~~~~~-----~~~~g~ 276 (324)
T TIGR02960 211 ERYIAAFESY-------DLDALTALLHEDAIWEMPPYTLWYQGRPAIVGFIHTVCPGEGAAG--MRLLP-----TIANGQ 276 (324)
T ss_pred HHHHHHHHcC-------CHHHHHHHhcCCeEEEcCCCCcceeCHHHHHHHHHHhcccccCCc--eeEEE-----eeecCC
Confidence 4566777654 5777889999999999885 4466777888888876 333355 65422 236788
Q ss_pred eEEEEEe
Q 014608 367 TWLVKFH 373 (421)
Q Consensus 367 ~~~v~~~ 373 (421)
.++|.|.
T Consensus 277 ~~~v~~~ 283 (324)
T TIGR02960 277 PAAAMYM 283 (324)
T ss_pred ceEEEEE
Confidence 8888873
No 272
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=39.05 E-value=43 Score=31.61 Aligned_cols=17 Identities=35% Similarity=0.575 Sum_probs=14.8
Q ss_pred CCeEEEEeCCCCCCCCC
Q 014608 8 ARLMIVSDLDHTMVDHH 24 (421)
Q Consensus 8 ~~klI~~DLDGTLl~~~ 24 (421)
+.+.|+.|||-|++|..
T Consensus 78 K~~aVvlDlDETvLdNs 94 (274)
T COG2503 78 KKKAVVLDLDETVLDNS 94 (274)
T ss_pred CCceEEEecchHhhcCc
Confidence 45699999999999976
No 273
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=37.80 E-value=67 Score=30.37 Aligned_cols=32 Identities=13% Similarity=0.025 Sum_probs=24.8
Q ss_pred HHHHHHcCCcEEEEEcCCCHHHHHHHHHhCCC
Q 014608 37 LWEAHYRRDSLLVFSTGRSPTLYKQLRKEKPM 68 (421)
Q Consensus 37 l~~~l~~~g~~vviaTGRs~~~~~~l~~~~~~ 68 (421)
+++.|+++|+.++|+|+.+...+..+.+.+++
T Consensus 109 lL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l 140 (267)
T PRK13478 109 VIAALRARGIKIGSTTGYTREMMDVVVPLAAA 140 (267)
T ss_pred HHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhh
Confidence 44567889999999999998777777766554
No 274
>PF01990 ATP-synt_F: ATP synthase (F/14-kDa) subunit; InterPro: IPR008218 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. The V-ATPases (or V1V0-ATPase) and A-ATPases (or A1A0-ATPase) are each composed of two linked complexes: the V1 or A1 complex contains the catalytic core that hydrolyses/synthesizes ATP, and the V0 or A0 complex that forms the membrane-spanning pore. The V- and A-ATPases both contain rotary motors, one that drives proton translocation across the membrane and one that drives ATP synthesis/hydrolysis [, , ]. The V- and A-ATPases more closely resemble one another in subunit structure than they do the F-ATPases, although the function of A-ATPases is closer to that of F-ATPases. This entry represents subunit F found in the V1 complex of V-ATPases (both eukaryotic and bacterial), as well as in the A1 complex of A-ATPases. Subunit F is a 16 kDa protein that is required for the assembly and activity of V-ATPase, and has a potential role in the differential targeting and regulation of the enzyme for specific organelles. This subunit is not necessary for the rotation of the ATPase V1 rotor, but it does promote catalysis []. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0046933 hydrogen ion transporting ATP synthase activity, rotational mechanism, 0046961 proton-transporting ATPase activity, rotational mechanism, 0015991 ATP hydrolysis coupled proton transport, 0033178 proton-transporting two-sector ATPase complex, catalytic domain; PDB: 2D00_E 3A5C_P 3J0J_H 3A5D_H 2OV6_A 2QAI_B 3AON_B 2I4R_A.
Probab=37.65 E-value=24 Score=27.91 Aligned_cols=62 Identities=23% Similarity=0.227 Sum_probs=43.0
Q ss_pred EEEEcCCcCchhhhcCCCceEEEecCChHHHHHHHHhhc-CCCCceeeccCCCccHHHHHHHHh
Q 014608 197 TLVCGDSGNDAELFSIPEVYGVMVSNAQEELLQWHAANA-KNNPKLTHATERCAAGIIQAIGHF 259 (421)
Q Consensus 197 vl~~GDs~NDi~M~~~agv~gvav~NA~~elk~~a~~v~-~~~~~~~~~~~~~~~GV~~~l~~~ 259 (421)
+.++||. --+..|+.+|+.++.+.+.++++.+.-.... ..+-.++..++...+.+-+.+.++
T Consensus 1 IavIGd~-~~v~gFrLaGv~~~~~~~~~ee~~~~l~~l~~~~~~gIIii~e~~~~~~~~~l~~~ 63 (95)
T PF01990_consen 1 IAVIGDR-DTVLGFRLAGVEGVYVNTDPEEAEEALKELLKDEDVGIIIITEDLAEKIRDELDEY 63 (95)
T ss_dssp EEEEE-H-HHHHHHHHTTSEEEEESHSHHHHHHHHHHHHHHTTEEEEEEEHHHHTTHHHHHHHH
T ss_pred CEEEeCH-HHHHHHHHcCCCCccCCCCHHHHHHHHHHHhcCCCccEEEeeHHHHHHHHHHHHHH
Confidence 5788998 6788899999777766536666666555555 344456677776777777777776
No 275
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=37.08 E-value=44 Score=33.27 Aligned_cols=44 Identities=14% Similarity=-0.014 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHhhCCCCCCcEEEEcCC-cCchhhhc-CCCceEEEecC
Q 014608 176 KGQALAYLLRKFKCEGKVPTNTLVCGDS-GNDAELFS-IPEVYGVMVSN 222 (421)
Q Consensus 176 Kg~al~~L~~~l~~~gi~~~~vl~~GDs-~NDi~M~~-~agv~gvav~N 222 (421)
.|-.+..+.+.+ |++.+++++|||. ..|+-..+ .+|+..+++..
T Consensus 279 ~gGn~~~~~~~l---~~~~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI~p 324 (343)
T TIGR02244 279 SGGSLKQFHELL---KWRGKEVLYFGDHIYGDLLRSKKKRGWRTAAIIP 324 (343)
T ss_pred eCCCHHHHHHHH---CCCCCcEEEECCcchHHHHhhHHhcCcEEEEEch
Confidence 346678899999 9999999999997 78999887 88988887643
No 276
>PRK13836 conjugal transfer protein TrbF; Provisional
Probab=36.85 E-value=2.3e+02 Score=26.14 Aligned_cols=29 Identities=7% Similarity=0.159 Sum_probs=23.9
Q ss_pred eEEEEEeeeEEeeeeCCeEEEEEeeeEEe
Q 014608 350 QFRVWVDRVLSTEIGPGTWLVKFHKWELS 378 (421)
Q Consensus 350 ~~~i~vd~~~~~~~~~~~~~v~~~~~~~~ 378 (421)
+-.+.|+=.+++..++++|-|||+|..+.
T Consensus 146 ~~~v~V~I~Si~~~s~~t~qVr~~et~~~ 174 (220)
T PRK13836 146 NATVAIEVNNIVALSNQSYQIDWTEFERD 174 (220)
T ss_pred CcEEEEEEEEEEeCCCCEEEEEEEEEEEc
Confidence 35677777777788999999999999876
No 277
>PF06062 UPF0231: Uncharacterised protein family (UPF0231); InterPro: IPR008249 The proteins in this entry are functionally uncharacterised.
Probab=36.07 E-value=53 Score=27.49 Aligned_cols=24 Identities=17% Similarity=0.195 Sum_probs=18.0
Q ss_pred HHHHHHHhcccccCCHHHHHHHHh
Q 014608 291 YLFYERWRRAEIDNSEIYLSSLKA 314 (421)
Q Consensus 291 ~~~~e~w~~~~~~~~~~~~~~l~~ 314 (421)
|.++-+||..|+..+...++.+++
T Consensus 22 Heaig~Wl~eEv~~d~~~i~~vl~ 45 (121)
T PF06062_consen 22 HEAIGRWLNEEVGGDLEKIDQVLA 45 (121)
T ss_pred HHHHHHHHHHHHccCHHHHHHHHH
Confidence 344578999998887777777664
No 278
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=35.56 E-value=68 Score=28.37 Aligned_cols=32 Identities=13% Similarity=-0.007 Sum_probs=26.0
Q ss_pred HHHHHHcCCcEEEEEcCCCHHHHHHHHHhCCC
Q 014608 37 LWEAHYRRDSLLVFSTGRSPTLYKQLRKEKPM 68 (421)
Q Consensus 37 l~~~l~~~g~~vviaTGRs~~~~~~l~~~~~~ 68 (421)
+++.++++|+.++|+|+.....+..+.+.+++
T Consensus 88 ~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~ 119 (201)
T TIGR01491 88 LVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNP 119 (201)
T ss_pred HHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCC
Confidence 34456788999999999988888888888875
No 279
>PRK13887 conjugal transfer protein TrbF; Provisional
Probab=35.34 E-value=2.3e+02 Score=26.78 Aligned_cols=31 Identities=19% Similarity=0.157 Sum_probs=25.5
Q ss_pred CceEEEEEeeeEEeeeeCCeEEEEEeeeEEe
Q 014608 348 GKQFRVWVDRVLSTEIGPGTWLVKFHKWELS 378 (421)
Q Consensus 348 g~~~~i~vd~~~~~~~~~~~~~v~~~~~~~~ 378 (421)
|++-.+.|+=.+++..++++|-|||+|..+.
T Consensus 170 ~~~~~v~V~I~Si~~~~~~taqVR~~et~~~ 200 (250)
T PRK13887 170 AAKEMVSVEIKSVLPQTPDTWQVDWVETTRD 200 (250)
T ss_pred ccceEEEEEEEEEEEcCCCEEEEEEEEEEEc
Confidence 4556777877777888999999999999776
No 280
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=35.00 E-value=78 Score=32.04 Aligned_cols=41 Identities=2% Similarity=-0.038 Sum_probs=30.8
Q ss_pred HHHHHHcCCcEEEEEcCCCHHHHHHHHHhCCCC-CCCEEEEc
Q 014608 37 LWEAHYRRDSLLVFSTGRSPTLYKQLRKEKPML-TPDITIMS 77 (421)
Q Consensus 37 l~~~l~~~g~~vviaTGRs~~~~~~l~~~~~~~-~~d~~I~~ 77 (421)
+++.|+++|++++++|+++...+..+.+.+++. .++.+++.
T Consensus 224 lL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~Iv~s 265 (381)
T PLN02575 224 FVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSVIVAA 265 (381)
T ss_pred HHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceEEEec
Confidence 444567889999999999988888888888864 35555553
No 281
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=34.99 E-value=95 Score=28.24 Aligned_cols=37 Identities=3% Similarity=-0.095 Sum_probs=27.3
Q ss_pred HHHcCCcEEEEEcCCCHHHHHHHHHhCCCCC-CCEEEE
Q 014608 40 AHYRRDSLLVFSTGRSPTLYKQLRKEKPMLT-PDITIM 76 (421)
Q Consensus 40 ~l~~~g~~vviaTGRs~~~~~~l~~~~~~~~-~d~~I~ 76 (421)
.++++|++++++|+.+...+..+.+.+++.. ++.+++
T Consensus 103 ~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~ 140 (222)
T PRK10826 103 LCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDALAS 140 (222)
T ss_pred HHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccEEEE
Confidence 4567899999999988888888888877643 444443
No 282
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=34.38 E-value=51 Score=28.82 Aligned_cols=62 Identities=16% Similarity=0.329 Sum_probs=38.2
Q ss_pred hHHHHHHHHHHHHhcCCcEEEEEEcCeeEEEecCCCCHHHHHHHHHHHHhhCC---CCCCcEEEEcCCcCc
Q 014608 139 AQTVTQKLSEIFKNRGLDVKIIYSGGMDLDILPQGAGKGQALAYLLRKFKCEG---KVPTNTLVCGDSGND 206 (421)
Q Consensus 139 ~~~~~~~l~~~l~~~~~~~~v~~s~~~~ldI~p~g~sKg~al~~L~~~l~~~g---i~~~~vl~~GDs~ND 206 (421)
...+.+.+...++..+..+.++.+... + +-...+.-.+.++++.++ + ++.++.++|||+.+|
T Consensus 66 ~~~~~~ki~~il~~l~ip~~~~~a~~~--d--~~RKP~~GM~~~~~~~~~--~~~~id~~~Sf~VGDaagr 130 (159)
T PF08645_consen 66 LENFHEKIENILKELGIPIQVYAAPHK--D--PCRKPNPGMWEFALKDYN--DGVEIDLANSFYVGDAAGR 130 (159)
T ss_dssp HHHHHHHHHHHHHHCTS-EEEEECGCS--S--TTSTTSSHHHHHHCCCTS--TT--S-CCC-EEEESSCHC
T ss_pred HHHHHHHHHHHHHHcCCceEEEecCCC--C--CCCCCchhHHHHHHHhcc--ccccccccceEEEeccCCC
Confidence 345566777777766666665555433 1 334456666777777772 2 688999999997555
No 283
>PF12707 DUF3804: Protein of unknown function (DUF3804); InterPro: IPR024525 Structural alignments indicate that this family of functionally uncharacterised proteins carry an NTF2-fold with a hydrophobic cavity. Family members also contain two highly conserved tryptophan residues toward their C-terminal ends.; PDB: 3HZP_A.
Probab=34.00 E-value=2.4e+02 Score=23.47 Aligned_cols=75 Identities=16% Similarity=0.090 Sum_probs=39.1
Q ss_pred HHhccCCCceEeCCCCcccCHHHHHHHHHhhcCCCCCceEEEEEeeeEE---eee-eCCeEEEEEeeeEE--eCcceee-
Q 014608 312 LKANCCPSGFCVPPSGGEISLAEAINQFRKCYGDKQGKQFRVWVDRVLS---TEI-GPGTWLVKFHKWEL--SGEERAC- 384 (421)
Q Consensus 312 l~~~~~p~~~~v~~~G~~~~~~~~~~~~~~~~g~~~g~~~~i~vd~~~~---~~~-~~~~~~v~~~~~~~--~~~~~~~- 384 (421)
|.+-..|+|-+|-|||.-++-..+...+-+ + .+.+...++.- +.. +++.+..-|.-.+. --|..+.
T Consensus 23 l~~N~T~DFLfIRPSGNPI~a~G~~~M~~s----~---Dvv~e~sEl~kIhrlE~l~~~~a~~~ftl~~~FsYKG~~NdD 95 (128)
T PF12707_consen 23 LIDNATPDFLFIRPSGNPIDAKGFEGMMDS----G---DVVQESSELIKIHRLEFLSDDWAMCAFTLGEKFSYKGTPNDD 95 (128)
T ss_dssp HHHHB-TT--EE-TTS-EE-HHHHHHHHTS----S---SEEEEEEEEEEEEEEEESSSSEEEEEEEEEEEEEETTEEEEE
T ss_pred hhcCCCcceEEEcCCCCccchhHHHHhhcc----C---ceeeeehheeeeeeEEecCCCeEEEEEEecceeEecCCcCCc
Confidence 445678999999999999998876665422 1 15555444432 233 44555555554444 4555555
Q ss_pred -EEEEEEEEE
Q 014608 385 -SIVSIIVRI 393 (421)
Q Consensus 385 -~~~t~~~~~ 393 (421)
+.-|.+|..
T Consensus 96 l~~~T~IFKK 105 (128)
T PF12707_consen 96 LSTYTSIFKK 105 (128)
T ss_dssp B-EEEEEEEE
T ss_pred hhHHHHHHhh
Confidence 566667754
No 284
>COG4483 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=33.95 E-value=22 Score=26.12 Aligned_cols=27 Identities=33% Similarity=0.513 Sum_probs=23.0
Q ss_pred HHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcC
Q 014608 179 ALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSI 212 (421)
Q Consensus 179 al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~ 212 (421)
-++.|++.+ |+ ++.|||-.-|++|++.
T Consensus 6 DVqQlLK~~---G~----ivyfg~r~~~iemm~~ 32 (68)
T COG4483 6 DVQQLLKKF---GI----IVYFGKRLYDIEMMQI 32 (68)
T ss_pred HHHHHHHHC---Ce----eeecCCHHHHHHHHHH
Confidence 467888888 76 9999999999999873
No 285
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=33.61 E-value=91 Score=28.15 Aligned_cols=40 Identities=13% Similarity=-0.129 Sum_probs=27.6
Q ss_pred HHHHHHcCCcEEEEEcCCCHHHHHHHHHhCCCC-CCCEEEE
Q 014608 37 LWEAHYRRDSLLVFSTGRSPTLYKQLRKEKPML-TPDITIM 76 (421)
Q Consensus 37 l~~~l~~~g~~vviaTGRs~~~~~~l~~~~~~~-~~d~~I~ 76 (421)
+++.|+++|++++++|+.+........+.+++. .++.+++
T Consensus 102 ~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~ 142 (221)
T TIGR02253 102 TLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAVIT 142 (221)
T ss_pred HHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccEEEE
Confidence 444567889999999988776666677777763 2454444
No 286
>PRK13865 type IV secretion system protein VirB8; Provisional
Probab=33.31 E-value=1.6e+02 Score=27.52 Aligned_cols=44 Identities=16% Similarity=0.295 Sum_probs=29.6
Q ss_pred ceEEEEEeeeEEeeeeCCeEEEEEeeeEEe-Cc-ceeeEE-EEEEEE
Q 014608 349 KQFRVWVDRVLSTEIGPGTWLVKFHKWELS-GE-ERACSI-VSIIVR 392 (421)
Q Consensus 349 ~~~~i~vd~~~~~~~~~~~~~v~~~~~~~~-~~-~~~~~~-~t~~~~ 392 (421)
+.-+|.|.-+++...+++.+.|||.+.-+. ++ .....| .|+-|+
T Consensus 154 ~~~~v~v~i~Si~~~~~~~AqVRF~kt~~~~~~~~~~~~wiATv~y~ 200 (229)
T PRK13865 154 KRGRLEVEHISSNDVTPGVQQIRYKRTLTMDGKMPVVSTWTATVRYE 200 (229)
T ss_pred CCcEEEEEEEEEEecCCCEEEEEEEEEEEecCCCceeEEEEEEEEEc
Confidence 446677776677778999999999987554 43 334444 555554
No 287
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=33.22 E-value=1e+02 Score=27.41 Aligned_cols=38 Identities=24% Similarity=0.216 Sum_probs=24.1
Q ss_pred HHHHcCCcEEEEEcCCCHHHHHHHHHhCCCC-CCCEEEE
Q 014608 39 EAHYRRDSLLVFSTGRSPTLYKQLRKEKPML-TPDITIM 76 (421)
Q Consensus 39 ~~l~~~g~~vviaTGRs~~~~~~l~~~~~~~-~~d~~I~ 76 (421)
+.|+++|++++++|+-+...+....+.+++. .++.+++
T Consensus 102 ~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~ 140 (198)
T TIGR01428 102 RALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFDAVLS 140 (198)
T ss_pred HHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhheeEe
Confidence 3456678888888877766666666666653 2344444
No 288
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=33.04 E-value=92 Score=28.40 Aligned_cols=31 Identities=6% Similarity=-0.048 Sum_probs=25.0
Q ss_pred HHHHHHHcCCcEEEEEcCCCHHHHHHHHHhC
Q 014608 36 ALWEAHYRRDSLLVFSTGRSPTLYKQLRKEK 66 (421)
Q Consensus 36 al~~~l~~~g~~vviaTGRs~~~~~~l~~~~ 66 (421)
.+++.++++|++++|+||.....+..+.+.+
T Consensus 81 e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~ 111 (219)
T PRK09552 81 EFVQFVKENNIPFYVVSGGMDFFVYPLLQGL 111 (219)
T ss_pred HHHHHHHHcCCeEEEECCCcHHHHHHHHHHh
Confidence 3555678899999999998887788888776
No 289
>COG4922 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=33.02 E-value=49 Score=27.31 Aligned_cols=74 Identities=15% Similarity=0.123 Sum_probs=47.9
Q ss_pred HHHHHHHHHhhcCCCCCceEEEEEeeeEEeeeeCCeEEEEEeeeEEeCc-ceeeEEEEEEEEEeCCCCee--EEEee--e
Q 014608 332 LAEAINQFRKCYGDKQGKQFRVWVDRVLSTEIGPGTWLVKFHKWELSGE-ERACSIVSIIVRIKDASDHT--YMHVH--E 406 (421)
Q Consensus 332 ~~~~~~~~~~~~g~~~g~~~~i~vd~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~t~~~~~~~~~~~~--w~h~h--e 406 (421)
.++.+++|...+-.+|-++.+| +..-.+|=||.-.=.|+.++ ......++=.|+.+ .+.+. |--++ |
T Consensus 46 k~~fv~fFt~ffk~~P~~~~ki-------Vr~iadGdLV~vh~hqt~~~pg~~~~v~~DtfR~d-dgkivEHWDviq~~e 117 (129)
T COG4922 46 KDGFVRFFTEFFKEKPRISTKI-------VRVIADGDLVTVHYHQTVSEPGSYTTVTFDTFRID-DGKIVEHWDVIQKNE 117 (129)
T ss_pred hHHHHHHHHHHHHhCcccccee-------eEEeccCCEEEEEEeeeeCCCCcceeEEEEEEEee-CCceeeccchhhccc
Confidence 4789999999999999755444 33444555555555566655 33334445556664 45665 88888 8
Q ss_pred ecccCCC
Q 014608 407 TWLEGFG 413 (421)
Q Consensus 407 t~~~~~~ 413 (421)
|...++.
T Consensus 118 tpen~~~ 124 (129)
T COG4922 118 TPENGSR 124 (129)
T ss_pred CCccCcc
Confidence 8777665
No 290
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=33.01 E-value=29 Score=32.59 Aligned_cols=19 Identities=11% Similarity=-0.001 Sum_probs=15.8
Q ss_pred CCCeEEEEeCCCCCCCCCC
Q 014608 7 AARLMIVSDLDHTMVDHHD 25 (421)
Q Consensus 7 ~~~klI~~DLDGTLl~~~~ 25 (421)
+..++++||++|||+....
T Consensus 5 ~~iravtfD~~~tLl~~~~ 23 (237)
T KOG3085|consen 5 MRIRAVTFDAGGTLLATLP 23 (237)
T ss_pred cceEEEEEeCCCceeecCC
Confidence 4578999999999998553
No 291
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=32.67 E-value=88 Score=27.00 Aligned_cols=33 Identities=12% Similarity=0.023 Sum_probs=25.1
Q ss_pred HHHHHHHcCCcEEEEEcCCCHHHHHHHHHhCCC
Q 014608 36 ALWEAHYRRDSLLVFSTGRSPTLYKQLRKEKPM 68 (421)
Q Consensus 36 al~~~l~~~g~~vviaTGRs~~~~~~l~~~~~~ 68 (421)
.+++.++++|+.++++||.....+..+.+.+++
T Consensus 80 ~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~ 112 (177)
T TIGR01488 80 ELISWLKERGIDTVIVSGGFDFFVEPVAEKLGI 112 (177)
T ss_pred HHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCC
Confidence 344455678899999998888778888887775
No 292
>TIGR03853 matur_matur probable metal-binding protein. This protein family was identified by searching with a phylogenetic profile based on an anaerobic sulfatase-maturase enzyme, which contains multiple 4Fe-4S clusters. The linkages by phylogenetic profiling and by iron-sulfur cluster-related motifs together suggest this protein may be an accessory protein to certain maturases in sulfatase/maturase systems.
Probab=31.97 E-value=1.8e+02 Score=22.27 Aligned_cols=37 Identities=8% Similarity=0.008 Sum_probs=32.2
Q ss_pred CHHH-HHHHHhccCCCceEeCCCCcccCHHHHHHHHHh
Q 014608 305 SEIY-LSSLKANCCPSGFCVPPSGGEISLAEAINQFRK 341 (421)
Q Consensus 305 ~~~~-~~~l~~~~~p~~~~v~~~G~~~~~~~~~~~~~~ 341 (421)
+.+. .+.+.+.|..+-.+-|=|...++.++|+++|..
T Consensus 19 t~~~L~~~i~~~FG~~arFhTCSa~~m~a~~Li~FL~~ 56 (77)
T TIGR03853 19 TRESLKAAIEQKFGEDARFHTCSAEGMTADELLQFLLK 56 (77)
T ss_pred CHHHHHHHHHHHhCCCceEeecccccCCHHHHHHHHHH
Confidence 3444 478889999999999999999999999999975
No 293
>PRK08241 RNA polymerase factor sigma-70; Validated
Probab=31.96 E-value=3.1e+02 Score=26.78 Aligned_cols=75 Identities=7% Similarity=-0.071 Sum_probs=48.5
Q ss_pred hHHHHHHHHHHHHhcccccCCHHHHHHHHhccCCCceEeCCCCc--ccCHHHHHHHHHhhcCCCCCceEEEEEeeeEEee
Q 014608 285 HEVVKLYLFYERWRRAEIDNSEIYLSSLKANCCPSGFCVPPSGG--EISLAEAINQFRKCYGDKQGKQFRVWVDRVLSTE 362 (421)
Q Consensus 285 ~evv~~~~~~e~w~~~~~~~~~~~~~~l~~~~~p~~~~v~~~G~--~~~~~~~~~~~~~~~g~~~g~~~~i~vd~~~~~~ 362 (421)
.++|+ .+++.|.+| .++.+.+.++|+.....|.+. ..-..++.++|+...+......+++.. ..
T Consensus 217 ~~~v~--~~~~A~~~g-------D~~~l~~lla~Dv~~~~p~~~~~~~G~~~v~~~~~~~~~~~~~~~~~~~~-----~~ 282 (339)
T PRK08241 217 RALLA--RYVAAFEAY-------DVDALVALLTEDATWSMPPFPLWYRGRDAIAAFLAGQCPGAGCGGSRLVP-----TR 282 (339)
T ss_pred HHHHH--HHHHHHhcC-------CHHHHHHHhcCCEEEEcCCCCCcccCHHHHHHHHHhhccccCCCceEEEE-----ee
Confidence 45554 447888765 466788889999998888755 677888888887764443211255522 23
Q ss_pred eeCCeEEEEEe
Q 014608 363 IGPGTWLVKFH 373 (421)
Q Consensus 363 ~~~~~~~v~~~ 373 (421)
..++.+++.|.
T Consensus 283 ~~g~~v~~~~~ 293 (339)
T PRK08241 283 ANGQPAFAQYM 293 (339)
T ss_pred cCCCeEEEEEE
Confidence 45667777663
No 294
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=31.33 E-value=1.1e+02 Score=29.26 Aligned_cols=31 Identities=6% Similarity=0.073 Sum_probs=20.5
Q ss_pred HHHHHcCCcEEEEEcCCCHHHHHHHHHhCCC
Q 014608 38 WEAHYRRDSLLVFSTGRSPTLYKQLRKEKPM 68 (421)
Q Consensus 38 ~~~l~~~g~~vviaTGRs~~~~~~l~~~~~~ 68 (421)
++.++++|+.++++|+.+...+..+...+++
T Consensus 110 L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i 140 (272)
T PRK13223 110 LKWLKKQGVEMALITNKPERFVAPLLDQMKI 140 (272)
T ss_pred HHHHHHCCCeEEEEECCcHHHHHHHHHHcCc
Confidence 3345667778888887776666666666554
No 295
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=30.01 E-value=1.1e+02 Score=28.12 Aligned_cols=42 Identities=12% Similarity=0.059 Sum_probs=27.4
Q ss_pred HHHHHHHcCCcEEEEEcCCCHHHHHHHHHhCCCC-CCCEEEEc
Q 014608 36 ALWEAHYRRDSLLVFSTGRSPTLYKQLRKEKPML-TPDITIMS 77 (421)
Q Consensus 36 al~~~l~~~g~~vviaTGRs~~~~~~l~~~~~~~-~~d~~I~~ 77 (421)
.+++.|+++|++++++|..+...+....+.+++. .++.++++
T Consensus 100 e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~iv~s 142 (224)
T PRK14988 100 PFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLDLLLST 142 (224)
T ss_pred HHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCCEEEEe
Confidence 3444667788889998887766666666666653 24555543
No 296
>PLN02954 phosphoserine phosphatase
Probab=29.83 E-value=96 Score=28.12 Aligned_cols=33 Identities=9% Similarity=0.017 Sum_probs=24.2
Q ss_pred HHHHHHcCCcEEEEEcCCCHHHHHHHHHhCCCC
Q 014608 37 LWEAHYRRDSLLVFSTGRSPTLYKQLRKEKPML 69 (421)
Q Consensus 37 l~~~l~~~g~~vviaTGRs~~~~~~l~~~~~~~ 69 (421)
+++.++++|+.++|+||.....+..+.+.+++.
T Consensus 92 ~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~ 124 (224)
T PLN02954 92 LVKKLRARGTDVYLVSGGFRQMIAPVAAILGIP 124 (224)
T ss_pred HHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCC
Confidence 444556778888888888877777777777753
No 297
>COG5663 Uncharacterized conserved protein [Function unknown]
Probab=29.48 E-value=38 Score=30.06 Aligned_cols=38 Identities=16% Similarity=0.064 Sum_probs=22.5
Q ss_pred EEEcCCc-CchhhhcCCCceEEEecCChHHHHHHHHhhcC
Q 014608 198 LVCGDSG-NDAELFSIPEVYGVMVSNAQEELLQWHAANAK 236 (421)
Q Consensus 198 l~~GDs~-NDi~M~~~agv~gvav~NA~~elk~~a~~v~~ 236 (421)
++|-|+. |=..+.+.+| ..|..-|++-.=|-.+..++.
T Consensus 137 lf~ed~~~na~~iAk~~~-~~vilins~ynRkp~~~niiR 175 (194)
T COG5663 137 LFFEDSHDNAGQIAKNAG-IPVILINSPYNRKPAAKNIIR 175 (194)
T ss_pred ccccccCchHHHHHHhcC-CcEEEecCcccccchHHHHHH
Confidence 5677764 4444455588 677777776555554444443
No 298
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=29.48 E-value=1.4e+02 Score=26.82 Aligned_cols=30 Identities=13% Similarity=0.040 Sum_probs=23.6
Q ss_pred HHHcCCcEEEEEcCCCHHHHHHHHHhCCCC
Q 014608 40 AHYRRDSLLVFSTGRSPTLYKQLRKEKPML 69 (421)
Q Consensus 40 ~l~~~g~~vviaTGRs~~~~~~l~~~~~~~ 69 (421)
.++++|+.++++|+........+.+.+++.
T Consensus 104 ~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 133 (226)
T PRK13222 104 ALKAAGYPLAVVTNKPTPFVAPLLEALGIA 133 (226)
T ss_pred HHHHCCCeEEEEeCCCHHHHHHHHHHcCCc
Confidence 445678999999999887777788877764
No 299
>PRK13587 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Provisional
Probab=29.45 E-value=4.7e+02 Score=24.33 Aligned_cols=56 Identities=14% Similarity=0.192 Sum_probs=37.0
Q ss_pred EEEecCCCCHHHHHHHHHHHHhhCCCCCCcEEEEcC--CcCchhhhcCCCceEEEecCChH
Q 014608 167 LDILPQGAGKGQALAYLLRKFKCEGKVPTNTLVCGD--SGNDAELFSIPEVYGVMVSNAQE 225 (421)
Q Consensus 167 ldI~p~g~sKg~al~~L~~~l~~~gi~~~~vl~~GD--s~NDi~M~~~agv~gvav~NA~~ 225 (421)
.++-..|..+|.-+..+.+.. ....-.+++.|- +..|+.-+...|+.+++++.|--
T Consensus 168 tdi~~dGt~~G~~~~li~~l~---~~~~ipvi~~GGi~s~edi~~l~~~G~~~vivG~a~~ 225 (234)
T PRK13587 168 TDIAKDGKMSGPNFELTGQLV---KATTIPVIASGGIRHQQDIQRLASLNVHAAIIGKAAH 225 (234)
T ss_pred ecccCcCCCCccCHHHHHHHH---HhCCCCEEEeCCCCCHHHHHHHHHcCCCEEEEhHHHH
Confidence 356566666666666444444 233456888886 56688766678888999987753
No 300
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=29.02 E-value=88 Score=28.77 Aligned_cols=34 Identities=15% Similarity=0.069 Sum_probs=29.1
Q ss_pred HHHHHHHcCCcEEEEEcCCCHHHHHHHHHhCCCC
Q 014608 36 ALWEAHYRRDSLLVFSTGRSPTLYKQLRKEKPML 69 (421)
Q Consensus 36 al~~~l~~~g~~vviaTGRs~~~~~~l~~~~~~~ 69 (421)
.+.+.+++.|.+++++||-....+.++.+.+++.
T Consensus 84 elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d 117 (212)
T COG0560 84 ELVAALKAAGAKVVIISGGFTFLVEPIAERLGID 117 (212)
T ss_pred HHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCc
Confidence 4555678999999999999988999999999864
No 301
>COG2433 Uncharacterized conserved protein [Function unknown]
Probab=28.98 E-value=1.2e+02 Score=32.49 Aligned_cols=55 Identities=18% Similarity=0.156 Sum_probs=39.8
Q ss_pred eEEEEeCCCCCCCCCCCCCccHHHHHHHHHHHHcCCcEEEEEcCCC--HHHHHHHHHhCC
Q 014608 10 LMIVSDLDHTMVDHHDAENLSLLRFNALWEAHYRRDSLLVFSTGRS--PTLYKQLRKEKP 67 (421)
Q Consensus 10 klI~~DLDGTLl~~~~~~~~s~~~~~al~~~l~~~g~~vviaTGRs--~~~~~~l~~~~~ 67 (421)
-+-++||||-+++-....+++.. .+.+...+.|.+++++|--+ |..++.+...++
T Consensus 256 giAvldldGevl~~~S~r~~~~~---eVve~I~~lG~PvvVAtDVtp~P~~V~KiAasf~ 312 (652)
T COG2433 256 GIAVLDLDGEVLDLESRRGIDRS---EVVEFISELGKPVVVATDVTPAPETVKKIAASFN 312 (652)
T ss_pred eEEEEecCCcEEeeeccccCCHH---HHHHHHHHcCCceEEEccCCCChHHHHHHHHHcC
Confidence 46789999999987655555533 33335568999999999665 456777887765
No 302
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=28.33 E-value=1.4e+02 Score=27.31 Aligned_cols=32 Identities=6% Similarity=-0.025 Sum_probs=23.4
Q ss_pred HHHHHHcCCcEEEEEcCCCHHHHHHHHHhCCC
Q 014608 37 LWEAHYRRDSLLVFSTGRSPTLYKQLRKEKPM 68 (421)
Q Consensus 37 l~~~l~~~g~~vviaTGRs~~~~~~l~~~~~~ 68 (421)
+++.|+++|+.++++|+.+......+.+.+++
T Consensus 103 ~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l 134 (229)
T PRK13226 103 MLQRLECAGCVWGIVTNKPEYLARLILPQLGW 134 (229)
T ss_pred HHHHHHHCCCeEEEECCCCHHHHHHHHHHcCc
Confidence 44456778888899998887666666676665
No 303
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=27.91 E-value=1.1e+02 Score=26.72 Aligned_cols=37 Identities=3% Similarity=-0.044 Sum_probs=21.7
Q ss_pred HHHHHcCCcEEEEEcCCCHHHHHHHHHhCCCC-CCCEEEE
Q 014608 38 WEAHYRRDSLLVFSTGRSPTLYKQLRKEKPML-TPDITIM 76 (421)
Q Consensus 38 ~~~l~~~g~~vviaTGRs~~~~~~l~~~~~~~-~~d~~I~ 76 (421)
++.|+++|+.++++|++ ..+..+.+.+++. .++.+++
T Consensus 97 l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~v~~ 134 (185)
T TIGR02009 97 LKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDAIVD 134 (185)
T ss_pred HHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCEeee
Confidence 34556778888888876 3345555655542 2444444
No 304
>KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=27.89 E-value=52 Score=33.31 Aligned_cols=40 Identities=15% Similarity=-0.011 Sum_probs=25.9
Q ss_pred CCCeEEEEeCCCCCCCCCCCCCccHHHHHHHHHHHHcCCcE
Q 014608 7 AARLMIVSDLDHTMVDHHDAENLSLLRFNALWEAHYRRDSL 47 (421)
Q Consensus 7 ~~~klI~~DLDGTLl~~~~~~~~s~~~~~al~~~l~~~g~~ 47 (421)
.++.++.||||+||..-.-+...+ +.++--...+...|..
T Consensus 25 ~~i~~~GfdmDyTL~~Y~~~~~es-Lay~~~~~~l~~~Gyp 64 (424)
T KOG2469|consen 25 ENIGIVGFDMDYTLARYNLPEMES-LAYDLAQFLLKDKGYP 64 (424)
T ss_pred hcCcEEeeccccchhhhcccchHH-HHHHHHHHHHHhcCCh
Confidence 358899999999999877554444 3344222345566655
No 305
>PF01282 Ribosomal_S24e: Ribosomal protein S24e; InterPro: IPR001976 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. This family contains the S24e ribosomal proteins from eukaryotes and archaebacteria. These proteins have 101 to 148 amino acids.; GO: 0003735 structural constituent of ribosome, 0006412 translation, 0005622 intracellular, 0005840 ribosome; PDB: 2V94_B 1YWX_A 2G1D_A 3IZ6_U 1XN9_A 2XZM_P 2XZN_P 3U5G_Y 3J16_D 3IZB_U ....
Probab=27.31 E-value=1.4e+02 Score=23.09 Aligned_cols=32 Identities=19% Similarity=0.310 Sum_probs=24.2
Q ss_pred EEEecCC---CCHHHHHHHHHHHHhhCCCCCCcEEEEc
Q 014608 167 LDILPQG---AGKGQALAYLLRKFKCEGKVPTNTLVCG 201 (421)
Q Consensus 167 ldI~p~g---~sKg~al~~L~~~l~~~gi~~~~vl~~G 201 (421)
+++...| .||......|++.+ +.+++.++++|
T Consensus 3 ~~v~h~g~~Tpsr~ei~~klA~~~---~~~~~~ivv~~ 37 (84)
T PF01282_consen 3 FEVLHPGKPTPSRKEIREKLAAML---NVDPDLIVVFG 37 (84)
T ss_dssp EEEE-SSSSS--HHHHHHHHHHHH---TSTGCCEEEEE
T ss_pred EEEECCCCCCCCHHHHHHHHHHHh---CCCCCeEEEec
Confidence 4555554 58889999999999 99999988887
No 306
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=27.03 E-value=82 Score=27.42 Aligned_cols=38 Identities=16% Similarity=-0.043 Sum_probs=28.9
Q ss_pred CHHHHHHHHHHHHhhCCC-CCCcEEEEcCCcCchhhhcCCCc
Q 014608 175 GKGQALAYLLRKFKCEGK-VPTNTLVCGDSGNDAELFSIPEV 215 (421)
Q Consensus 175 sKg~al~~L~~~l~~~gi-~~~~vl~~GDs~NDi~M~~~agv 215 (421)
=|...++.|.+.+ .- ...-+++|||..+|+++.+.+|+
T Consensus 102 ~K~~~l~~i~~~~---~~~~~~f~~~~gn~~~D~~~y~~~gi 140 (157)
T smart00775 102 FKIACLRDIKSLF---PPQGNPFYAGFGNRITDVISYSAVGI 140 (157)
T ss_pred HHHHHHHHHHHhc---CCCCCCEEEEeCCCchhHHHHHHcCC
Confidence 3788888888877 21 22345679999999999999883
No 307
>TIGR03572 WbuZ glycosyl amidation-associated protein WbuZ. This clade of sequences is highly similar to the HisF protein, but generally represents the second HisF homolog in the genome where the other is an authentic HisF observed in the context of a complete histidine biosynthesis operon. The similarity between these WbuZ sequences and true HisFs is such that often the closest match by BLAST of a WbuZ is a HisF. Only by making a multiple sequence alignment is the homology relationship among the WbuZ sequences made apparent. WbuZ genes are invariably observed in the presence of a homolog of the HisH protein (designated WbuY) and a proposed N-acetyl sugar amidotransferase designated in WbuX in E. coli, IfnA in P. aeriginosa and PseA in C. jejuni. Similarly, this trio of genes is invariably found in the context of saccharide biosynthesis loci. It has been shown that the WbuYZ homologs are not essential components of the activity expressed by WbuX, leading to the proposal that these to pr
Probab=26.93 E-value=4.9e+02 Score=23.80 Aligned_cols=30 Identities=13% Similarity=0.008 Sum_probs=23.6
Q ss_pred CCcEEEEcC--CcCchhh-hcCCCceEEEecCC
Q 014608 194 PTNTLVCGD--SGNDAEL-FSIPEVYGVMVSNA 223 (421)
Q Consensus 194 ~~~vl~~GD--s~NDi~M-~~~agv~gvav~NA 223 (421)
.-.+++.|+ +..|+.- ++..|+.+|+++.|
T Consensus 197 ~ipvia~GGi~s~~di~~~l~~~gadgV~vg~a 229 (232)
T TIGR03572 197 SIPVIALGGAGSLDDLVEVALEAGASAVAAASL 229 (232)
T ss_pred CCCEEEECCCCCHHHHHHHHHHcCCCEEEEehh
Confidence 346999997 5678777 77788889999876
No 308
>TIGR01182 eda Entner-Doudoroff aldolase. 2-deydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) is an enzyme of the Entner-Doudoroff pathway. This aldolase has another function, 4-hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) shown experimentally in Escherichia coli and Pseudomonas putida
Probab=26.59 E-value=5e+02 Score=23.76 Aligned_cols=34 Identities=18% Similarity=0.213 Sum_probs=26.3
Q ss_pred CCHHHHHHHHhccCCCceEeCCCCcccCHHHHHHHHH
Q 014608 304 NSEIYLSSLKANCCPSGFCVPPSGGEISLAEAINQFR 340 (421)
Q Consensus 304 ~~~~~~~~l~~~~~p~~~~v~~~G~~~~~~~~~~~~~ 340 (421)
.+..++..|+++| |+-.++...|+.. +.+-++|.
T Consensus 134 GG~~yikal~~pl-p~i~~~ptGGV~~--~N~~~~l~ 167 (204)
T TIGR01182 134 GGVKMLKALAGPF-PQVRFCPTGGINL--ANVRDYLA 167 (204)
T ss_pred CCHHHHHHHhccC-CCCcEEecCCCCH--HHHHHHHh
Confidence 3578999999998 8999997778766 45566664
No 309
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=25.99 E-value=1.3e+02 Score=27.15 Aligned_cols=33 Identities=6% Similarity=0.047 Sum_probs=24.9
Q ss_pred HHHHHHcCCcEEEEEcCCCHHHHHHHHHhCCCC
Q 014608 37 LWEAHYRRDSLLVFSTGRSPTLYKQLRKEKPML 69 (421)
Q Consensus 37 l~~~l~~~g~~vviaTGRs~~~~~~l~~~~~~~ 69 (421)
+++.++++|+.++++||.....+..+.+.+++.
T Consensus 93 ~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~ 125 (219)
T TIGR00338 93 LVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLD 125 (219)
T ss_pred HHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCC
Confidence 334566789999999988877777788877753
No 310
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=25.63 E-value=1.1e+02 Score=32.52 Aligned_cols=59 Identities=10% Similarity=-0.013 Sum_probs=38.6
Q ss_pred eEEEEeCCCCCCCCCCCCCccHHHHHHHHHHHHcCCc-EEEEEcCCCHHHHHHHHHhCCC
Q 014608 10 LMIVSDLDHTMVDHHDAENLSLLRFNALWEAHYRRDS-LLVFSTGRSPTLYKQLRKEKPM 68 (421)
Q Consensus 10 klI~~DLDGTLl~~~~~~~~s~~~~~al~~~l~~~g~-~vviaTGRs~~~~~~l~~~~~~ 68 (421)
..++.-.||++...-..............+.|+++|+ +++++||.+...+..+.+.+++
T Consensus 343 ~~~~v~~~~~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi 402 (536)
T TIGR01512 343 TIVHVARDGTYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGI 402 (536)
T ss_pred eEEEEEECCEEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCC
Confidence 3455556776643221001111223344457889999 9999999999999999999886
No 311
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=25.30 E-value=1.4e+02 Score=25.05 Aligned_cols=31 Identities=16% Similarity=0.014 Sum_probs=22.3
Q ss_pred HHHHHHHcCCcEEEEEcCCCHHHHHHHHHhC
Q 014608 36 ALWEAHYRRDSLLVFSTGRSPTLYKQLRKEK 66 (421)
Q Consensus 36 al~~~l~~~g~~vviaTGRs~~~~~~l~~~~ 66 (421)
.+++.|+++|++++++|+++...+..+.+.+
T Consensus 71 e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~ 101 (154)
T TIGR01549 71 DLLKRLKEAGIKLGIISNGSLRAQKLLLRKH 101 (154)
T ss_pred HHHHHHHHCcCeEEEEeCCchHHHHHHHHHH
Confidence 4444567788899999988877766666653
No 312
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=24.46 E-value=1.6e+02 Score=25.52 Aligned_cols=15 Identities=33% Similarity=0.550 Sum_probs=13.0
Q ss_pred eEEEEeCCCCCCCCC
Q 014608 10 LMIVSDLDHTMVDHH 24 (421)
Q Consensus 10 klI~~DLDGTLl~~~ 24 (421)
.+|+||+||||++..
T Consensus 2 ~~iiFD~dgTL~~~~ 16 (188)
T TIGR01489 2 VVVVSDFDGTITLND 16 (188)
T ss_pred eEEEEeCCCcccCCC
Confidence 579999999999865
No 313
>COG2421 Predicted acetamidase/formamidase [Energy production and conversion]
Probab=24.06 E-value=29 Score=33.67 Aligned_cols=83 Identities=18% Similarity=0.216 Sum_probs=60.6
Q ss_pred cccCCchhHHHHHHHHHHHHhcccccCCHHHHHHHHhccCCCceEeCCC-CcccCHHHHHHHHHhhcCCCCCceEEEEEe
Q 014608 278 VKSIDLGHEVVKLYLFYERWRRAEIDNSEIYLSSLKANCCPSGFCVPPS-GGEISLAEAINQFRKCYGDKQGKQFRVWVD 356 (421)
Q Consensus 278 ~~~~~~~~evv~~~~~~e~w~~~~~~~~~~~~~~l~~~~~p~~~~v~~~-G~~~~~~~~~~~~~~~~g~~~g~~~~i~vd 356 (421)
++++++|+-|+ ....+|+.+.+.+++ .+...+.-||+-|||- |-.- --|++||.-|++.|.
T Consensus 20 v~~v~~Gd~V~---iet~d~~~gq~~~~~----~~~~~~~iD~~rv~p~TGPi~-----------v~gA~pGD~L~V~i~ 81 (305)
T COG2421 20 VETVKPGDTVT---IETLDALGGQIKAEE----TLEDIFKIDFSRVHPLTGPIY-----------VEGAEPGDALEVEIE 81 (305)
T ss_pred ceecCCCCEEE---EEEEeccCccccccc----hhhhhcccCcccccCCCCCeE-----------EeccCCCceEEEEEE
Confidence 34578888776 677889999888777 4455667788888885 4332 358999999999998
Q ss_pred eeEEeeeeCCeEEEEEeeeEEeCc
Q 014608 357 RVLSTEIGPGTWLVKFHKWELSGE 380 (421)
Q Consensus 357 ~~~~~~~~~~~~~v~~~~~~~~~~ 380 (421)
++.... +.+|++-|.-+-..++
T Consensus 82 ~i~~~~--~~G~~~~~pG~G~L~d 103 (305)
T COG2421 82 DIKPSP--PWGYTAVFPGFGVLGD 103 (305)
T ss_pred eeccCC--CceEEEEccccccChh
Confidence 887765 8888888875544433
No 314
>PRK13872 conjugal transfer protein TrbF; Provisional
Probab=23.85 E-value=4.6e+02 Score=24.21 Aligned_cols=44 Identities=14% Similarity=0.159 Sum_probs=28.4
Q ss_pred EEEEEeeeEEeeeeCCeEEEEEeeeEEe-Ccc-eeeEE-EEEEEEEe
Q 014608 351 FRVWVDRVLSTEIGPGTWLVKFHKWELS-GEE-RACSI-VSIIVRIK 394 (421)
Q Consensus 351 ~~i~vd~~~~~~~~~~~~~v~~~~~~~~-~~~-~~~~~-~t~~~~~~ 394 (421)
-.+.|+=..++..++++|-|+|.|..+. |+. ...+| .|+-+...
T Consensus 154 ~~v~V~I~Si~~~~~~t~qVr~~e~~~~~g~~~~~~~w~atvt~~~~ 200 (228)
T PRK13872 154 QQVAVEVSSVIRASPDSFRVAWTERRYENGALAGTERWTAILTIVIQ 200 (228)
T ss_pred eEEEEEEEEEeecCCCEEEEEEEEEEEeCCCccCceEEEEEEEEEEc
Confidence 4666665566678999999999987665 432 33344 44445443
No 315
>PRK01189 V-type ATP synthase subunit F; Provisional
Probab=23.45 E-value=1.2e+02 Score=24.65 Aligned_cols=64 Identities=8% Similarity=0.053 Sum_probs=41.9
Q ss_pred cEEEEcCCcCchhhhcCCCceEEEecCChHHHHHHHHhhcCCCCceeeccCCCccHHH-HHHHHhh
Q 014608 196 NTLVCGDSGNDAELFSIPEVYGVMVSNAQEELLQWHAANAKNNPKLTHATERCAAGII-QAIGHFK 260 (421)
Q Consensus 196 ~vl~~GDs~NDi~M~~~agv~gvav~NA~~elk~~a~~v~~~~~~~~~~~~~~~~GV~-~~l~~~~ 260 (421)
.+.++||...=+ -|+.+|+.++.+.+..+++++.-+.....+--+++.|+....-+- +.++++.
T Consensus 4 kIaVvGd~Dtil-GFrlaGi~~v~~~~~~e~~~~~~~~l~~~~~gII~iTE~~a~~i~~~~i~~~~ 68 (104)
T PRK01189 4 CITVIGERDVVL-GFRLLGIGDTIEAEGKDLVKKFLEIFNNPKCKYIFVSESTKNMFDKNTLRSLE 68 (104)
T ss_pred eEEEEcCHHHHH-HHHHcCCceEEEcCCHHHHHHHHHHHhcCCeEEEEEEHHHHhhCCHHHHHHHh
Confidence 588999976544 478899655666666677766555455555556777776666665 5666554
No 316
>TIGR01658 EYA-cons_domain eyes absent protein conserved domain. This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences.
Probab=23.35 E-value=1e+02 Score=29.28 Aligned_cols=55 Identities=13% Similarity=0.191 Sum_probs=45.2
Q ss_pred cCCCCHHHHHHHHHHHHhhCCCCCCcEEEEcCCcCchhhhcCCCceEEEecCChHHHHH
Q 014608 171 PQGAGKGQALAYLLRKFKCEGKVPTNTLVCGDSGNDAELFSIPEVYGVMVSNAQEELLQ 229 (421)
Q Consensus 171 p~g~sKg~al~~L~~~l~~~gi~~~~vl~~GDs~NDi~M~~~agv~gvav~NA~~elk~ 229 (421)
+..++|-+.-+++.+++ |-+.-.-++|||+.--.+..+..+ .++.--+..+.+.+
T Consensus 210 a~kvGK~~cFe~I~~Rf---g~p~~~f~~IGDG~eEe~aAk~l~-wPFw~I~~h~Dl~~ 264 (274)
T TIGR01658 210 SIKVGKLQCFKWIKERF---GHPKVRFCAIGDGWEECTAAQAMN-WPFVKIDLHPDSSH 264 (274)
T ss_pred hhhcchHHHHHHHHHHh---CCCCceEEEeCCChhHHHHHHhcC-CCeEEeecCCCHHH
Confidence 44688999999999999 887888999999998888888888 67666666666643
No 317
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=23.00 E-value=1e+02 Score=26.39 Aligned_cols=53 Identities=8% Similarity=-0.097 Sum_probs=38.2
Q ss_pred EEEEeCCCCCCCCCCCCCccHHHHHHHHHHHHcCCcEEEEEcCCCHHHHHHHHHhCCC
Q 014608 11 MIVSDLDHTMVDHHDAENLSLLRFNALWEAHYRRDSLLVFSTGRSPTLYKQLRKEKPM 68 (421)
Q Consensus 11 lI~~DLDGTLl~~~~~~~~s~~~~~al~~~l~~~g~~vviaTGRs~~~~~~l~~~~~~ 68 (421)
..+-++++|+...+.-...- .+.+. +|.+. +.++++||-...++.++.+..++
T Consensus 16 ~~~~~v~~tiatgGklf~ev---~e~iq-eL~d~-V~i~IASgDr~gsl~~lae~~gi 68 (152)
T COG4087 16 SKAGKVLYTIATGGKLFSEV---SETIQ-ELHDM-VDIYIASGDRKGSLVQLAEFVGI 68 (152)
T ss_pred eecceEEEEEccCcEEcHhh---HHHHH-HHHHh-heEEEecCCcchHHHHHHHHcCC
Confidence 35678889998776432221 22333 45666 99999999999999999998885
No 318
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=22.69 E-value=48 Score=31.48 Aligned_cols=17 Identities=24% Similarity=0.495 Sum_probs=15.0
Q ss_pred CCeEEEEeCCCCCCCCC
Q 014608 8 ARLMIVSDLDHTMVDHH 24 (421)
Q Consensus 8 ~~klI~~DLDGTLl~~~ 24 (421)
..-+++||+|-||+.+.
T Consensus 19 ~~tLvvfDiDdTLi~~~ 35 (252)
T PF11019_consen 19 QDTLVVFDIDDTLITPK 35 (252)
T ss_pred CCeEEEEEcchhhhcCc
Confidence 56799999999999876
No 319
>PF14824 Sirohm_synth_M: Sirohaem biosynthesis protein central; PDB: 1KYQ_B.
Probab=21.73 E-value=1.2e+02 Score=18.85 Aligned_cols=23 Identities=39% Similarity=0.540 Sum_probs=15.5
Q ss_pred CCcEEEEEc-CCCHHHHHHHHHhC
Q 014608 44 RDSLLVFST-GRSPTLYKQLRKEK 66 (421)
Q Consensus 44 ~g~~vviaT-GRs~~~~~~l~~~~ 66 (421)
-...++|+| |.+|.....+++++
T Consensus 3 g~LqI~ISTnG~sP~la~~iR~~i 26 (30)
T PF14824_consen 3 GPLQIAISTNGKSPRLARLIRKEI 26 (30)
T ss_dssp TTEEEEEEESSS-HHHHHHHHHHH
T ss_pred CCeEEEEECCCCChHHHHHHHHHH
Confidence 346788888 77887777776653
No 320
>PF03215 Rad17: Rad17 cell cycle checkpoint protein
Probab=21.49 E-value=1.4e+02 Score=31.53 Aligned_cols=49 Identities=27% Similarity=0.364 Sum_probs=31.8
Q ss_pred cccchHHHHHHHHHHHHhcCCcEEEEEEcCeeEEEecCCCCHHHHHHHHHHHHhhCCCC
Q 014608 135 DKDKAQTVTQKLSEIFKNRGLDVKIIYSGGMDLDILPQGAGKGQALAYLLRKFKCEGKV 193 (421)
Q Consensus 135 ~~~~~~~~~~~l~~~l~~~~~~~~v~~s~~~~ldI~p~g~sKg~al~~L~~~l~~~gi~ 193 (421)
.+.+.+++..+|...+.... .....+=--|.|++|-++|+.|++.+ |+.
T Consensus 24 hkkKv~eV~~wl~~~~~~~~-------~~~iLlLtGP~G~GKtttv~~La~el---g~~ 72 (519)
T PF03215_consen 24 HKKKVEEVRSWLEEMFSGSS-------PKRILLLTGPSGCGKTTTVKVLAKEL---GFE 72 (519)
T ss_pred cHHHHHHHHHHHHHHhccCC-------CcceEEEECCCCCCHHHHHHHHHHHh---CCe
Confidence 34466677777776554321 01112223399999999999999999 764
No 321
>PRK03957 V-type ATP synthase subunit F; Provisional
Probab=21.30 E-value=1.4e+02 Score=23.88 Aligned_cols=61 Identities=21% Similarity=0.173 Sum_probs=36.8
Q ss_pred cEEEEcCCcCchhhhcCCCceEEEecCChHHHHHHHHhhc-CCCCceeeccCCCccHHHHHHH
Q 014608 196 NTLVCGDSGNDAELFSIPEVYGVMVSNAQEELLQWHAANA-KNNPKLTHATERCAAGIIQAIG 257 (421)
Q Consensus 196 ~vl~~GDs~NDi~M~~~agv~gvav~NA~~elk~~a~~v~-~~~~~~~~~~~~~~~GV~~~l~ 257 (421)
.+.++|| ..-+-.|+.+|+..+.+.+.++++++.-...+ ..+-.++..++...+-+-+.+.
T Consensus 2 kIaVIgD-~dtv~GFrLaGi~~~~~v~~~ee~~~~l~~l~~~~d~gII~ite~~~~~i~~~i~ 63 (100)
T PRK03957 2 KIAVVGD-RDTVTGFRLAGLTEVYEVKNPEEAKNAIKELVENDEIGIIIITERIAEEIRDLIS 63 (100)
T ss_pred EEEEEeC-HHHHHHHHHcCCCceEEeCCHHHHHHHHHHHhhCCCeEEEEEcHHHHHHHHHHHh
Confidence 4789999 77788899999533334444467776666555 3333455665544444444443
No 322
>cd00667 ring_hydroxylating_dioxygenases_beta Ring hydroxylating dioxygenase beta subunit. This subunit has a similar structure to NTF-2, Ketosteroid isomerase and scytalone dehydratase.The degradation of aromatic compounds by aerobic bacteria frequently begins with the dihydroxylation of the substrate by nonheme iron-containing dioxygenases. These enzymes consist of two or three soluble proteins that interact to form an electron-transport chain that transfers electrons from reduced nucleotides (NADH) via flavin and [2Fe-2S] redox centers to a terminal dioxygenase. Aromatic-ring-hydroxylating dioxygenases oxidize aromatic hydrocarbons and related compounds to cis-arene diols. These enzymes utilize a mononuclear non-heme iron center to catalyze the addition of dioxygen to their respective substrates. The active site of these enzymes however is in the alpha sub-unit. No functional role has been attributed to the beta sub-unit except for a structural role.
Probab=21.14 E-value=5.2e+02 Score=21.98 Aligned_cols=82 Identities=15% Similarity=0.020 Sum_probs=54.3
Q ss_pred hHHHHHHHHHHHHhcccccCCHHHHHHHHhccCCCceEeCCCCccc-----------------CHHHHHHH---HHhhcC
Q 014608 285 HEVVKLYLFYERWRRAEIDNSEIYLSSLKANCCPSGFCVPPSGGEI-----------------SLAEAINQ---FRKCYG 344 (421)
Q Consensus 285 ~evv~~~~~~e~w~~~~~~~~~~~~~~l~~~~~p~~~~v~~~G~~~-----------------~~~~~~~~---~~~~~g 344 (421)
.||.++...+.+.+- ...++.+.+-|.|++.+--|+.... +...+.+. |+...+
T Consensus 4 ~~I~~ll~~ya~~LD------~~~~~~w~~lft~D~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~rv~~l~~~~~ 77 (160)
T cd00667 4 AEVEQFLYREARLLD------DRRWDEWLALFAEDCHYWVPARENRERRDEDPGLELSAIYDDDRRMLEDRVVRLRTGRA 77 (160)
T ss_pred HHHHHHHHHHHHHhc------ccCHHHHHHhhccccEEEcceeechhhhccCCCCCeeEEEeCCHHHHHHHHHHHhcCCc
Confidence 578888888877774 3568999999999999887764321 33444443 444332
Q ss_pred --CCCCceEEEEEeeeEEeeeeCCeEEEEE
Q 014608 345 --DKQGKQFRVWVDRVLSTEIGPGTWLVKF 372 (421)
Q Consensus 345 --~~~g~~~~i~vd~~~~~~~~~~~~~v~~ 372 (421)
..|....+=.|..+++....++.+.|+-
T Consensus 78 ~~~~~~~~~rH~vsn~~i~~~~~d~a~~~s 107 (160)
T cd00667 78 WSEDPPSRTRHLVSNVRVLEGDGGEIEVRS 107 (160)
T ss_pred cccCCCCcceEEEccEEEEecCCCEEEEEE
Confidence 2344446777888887776677777754
No 323
>PRK09636 RNA polymerase sigma factor SigJ; Provisional
Probab=20.75 E-value=6.7e+02 Score=23.91 Aligned_cols=72 Identities=14% Similarity=0.021 Sum_probs=42.1
Q ss_pred HHHHHHhcccccCCHHHHHHHHhccCCCceEeCCCCcc--------cCHHHHHHHHHhhcCCCCCceEEEEEeeeEEeee
Q 014608 292 LFYERWRRAEIDNSEIYLSSLKANCCPSGFCVPPSGGE--------ISLAEAINQFRKCYGDKQGKQFRVWVDRVLSTEI 363 (421)
Q Consensus 292 ~~~e~w~~~~~~~~~~~~~~l~~~~~p~~~~v~~~G~~--------~~~~~~~~~~~~~~g~~~g~~~~i~vd~~~~~~~ 363 (421)
.+++.+-+| .++.|.+-++|+.++..+.|.. .-.+++..+|.......++ .+. ..++.+.+
T Consensus 179 ~f~~A~~~g-------D~~~l~~Lla~Dv~~~~dggg~~~~~~~~~~G~~~v~~~l~~~~~~~~~-~~~---~~~~~~~v 247 (293)
T PRK09636 179 AFFAALASG-------DLDALVALLAPDVVLHADGGGKVPTALRPIYGADKVARFFLGLARRYGP-GGS---TLVRLALV 247 (293)
T ss_pred HHHHHHHhC-------CHHHHHHHHhhCeEEEecCCCccCCCCccccCHHHHHHHHHHHhhhccC-CCc---eEEEEEEE
Confidence 444555543 6777888899999999665433 4566666766555432211 011 12234556
Q ss_pred eCCeEEEEEee
Q 014608 364 GPGTWLVKFHK 374 (421)
Q Consensus 364 ~~~~~~v~~~~ 374 (421)
.++.++|-|..
T Consensus 248 nG~~a~~~~~~ 258 (293)
T PRK09636 248 NGLPGFVTAEA 258 (293)
T ss_pred CCceeEEEEeC
Confidence 66677776654
No 324
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=20.64 E-value=2.5e+02 Score=25.41 Aligned_cols=32 Identities=6% Similarity=-0.108 Sum_probs=23.8
Q ss_pred HHHHHHHcCCcEEEEEcCCCHHHHHHHHHhCC
Q 014608 36 ALWEAHYRRDSLLVFSTGRSPTLYKQLRKEKP 67 (421)
Q Consensus 36 al~~~l~~~g~~vviaTGRs~~~~~~l~~~~~ 67 (421)
.+++.++++|+.++|+||.....+..+.+.+.
T Consensus 77 e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~ 108 (214)
T TIGR03333 77 EFVAFINEHGIPFYVISGGMDFFVYPLLEGIV 108 (214)
T ss_pred HHHHHHHHCCCeEEEECCCcHHHHHHHHHhhC
Confidence 34445677899999999988777777777653
No 325
>cd04732 HisA HisA. Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase catalyzes the fourth step in histidine biosynthesis, an isomerisation of the aminoaldose moiety of ProFAR to the aminoketose of PRFAR (N-(5'-phospho-D-1'-ribulosylformimino)-5-amino-1-(5''-phospho-ribosyl)-4-imidazolecarboxamide). In bacteria and archaea, ProFAR isomerase is encoded by the HisA gene.
Probab=20.56 E-value=6.5e+02 Score=22.87 Aligned_cols=42 Identities=24% Similarity=0.207 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHhhCCCCCCcEEEEcC--CcCchhhhcCCCceEEEecCCh
Q 014608 177 GQALAYLLRKFKCEGKVPTNTLVCGD--SGNDAELFSIPEVYGVMVSNAQ 224 (421)
Q Consensus 177 g~al~~L~~~l~~~gi~~~~vl~~GD--s~NDi~M~~~agv~gvav~NA~ 224 (421)
-..++.+++.. . -.+++.|+ +.+|+..+...|+.+|+++.+-
T Consensus 179 ~~~i~~i~~~~---~---ipvi~~GGi~~~~di~~~~~~Ga~gv~vg~~~ 222 (234)
T cd04732 179 FELYKELAAAT---G---IPVIASGGVSSLDDIKALKELGVAGVIVGKAL 222 (234)
T ss_pred HHHHHHHHHhc---C---CCEEEecCCCCHHHHHHHHHCCCCEEEEeHHH
Confidence 34555555554 3 35899997 5578877777787889887663
Done!