Citrus Sinensis ID: 014612
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 421 | ||||||
| 255552672 | 418 | conserved hypothetical protein [Ricinus | 0.928 | 0.935 | 0.661 | 1e-152 | |
| 224141311 | 414 | predicted protein [Populus trichocarpa] | 0.912 | 0.927 | 0.628 | 1e-142 | |
| 296087706 | 419 | unnamed protein product [Vitis vinifera] | 0.973 | 0.978 | 0.590 | 1e-142 | |
| 225452538 | 419 | PREDICTED: uncharacterized protein LOC10 | 0.973 | 0.978 | 0.585 | 1e-140 | |
| 147844703 | 1961 | hypothetical protein VITISV_002644 [Viti | 0.817 | 0.175 | 0.657 | 1e-139 | |
| 356550921 | 446 | PREDICTED: uncharacterized protein LOC10 | 0.938 | 0.885 | 0.536 | 1e-135 | |
| 449459418 | 432 | PREDICTED: uncharacterized protein LOC10 | 0.885 | 0.863 | 0.584 | 1e-131 | |
| 356573398 | 443 | PREDICTED: uncharacterized protein LOC10 | 0.909 | 0.864 | 0.541 | 1e-130 | |
| 224115394 | 342 | predicted protein [Populus trichocarpa] | 0.809 | 0.997 | 0.611 | 1e-126 | |
| 15232914 | 414 | protein trichome birefringence-like 22 [ | 0.973 | 0.990 | 0.535 | 1e-123 |
| >gi|255552672|ref|XP_002517379.1| conserved hypothetical protein [Ricinus communis] gi|223543390|gb|EEF44921.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust.
Identities = 266/402 (66%), Positives = 311/402 (77%), Gaps = 11/402 (2%)
Query: 22 MGRLGSFLFYSLALTTVFSFFLLFSPNSVK-ILPKSSVHYDQG----REKIDVEECDLFK 76
M R+ FL L LTT+FS FLL+SPN K I+PK DQ + + E CDLFK
Sbjct: 23 MERVAPFLLSFLFLTTIFSLFLLYSPNPFKPIIPKHD--RDQKLLLINSQKEEENCDLFK 80
Query: 77 GRWVPDFRGSQYTNWSCPTIPVSKNCFRHGRKDTDFLNWRWKPHNCDLPRFDAKQFLAFV 136
G+W+PD +GSQYTN SC TIP SKNCFRHGRKD DFL WRWKP CDLPRFD+K FL V
Sbjct: 81 GQWIPDLKGSQYTNSSCTTIPNSKNCFRHGRKDADFLYWRWKPDKCDLPRFDSKAFLEIV 140
Query: 137 RGKKLAFIGDSVARNHMESLLCLLSQEEVPIDAYKDSEDRHRIWYFADHDFTLSILWSKF 196
RGK LAFIGDSVARNHMESLLCLLSQ EVP+DAYKD+EDR+RIW+F +HDFTL ILW+KF
Sbjct: 141 RGKALAFIGDSVARNHMESLLCLLSQGEVPVDAYKDTEDRNRIWHFPNHDFTLKILWTKF 200
Query: 197 LVLGEERVINGSSSGIYDLYLDKVDDRWASDLPYVDYAIISTAHWFFRPIHVHDGGKVIG 256
LV GEER+INGSSSG++DLYLDKVDD WA+DL +DY IIS HWFFRPIH+H G VI
Sbjct: 201 LVAGEERMINGSSSGVFDLYLDKVDDNWATDLHTLDYIIISDGHWFFRPIHLHKGSNVIA 260
Query: 257 CVFCNEPNVRPMDPLDAIGLAFRAILRYINQCKQCNKRKMLALFRTFSPAHFEHGAWDTG 316
CV+CNEPN+ A+ +AFRA L +I CK+C + ++ L RTFSP+HFE+G WDTG
Sbjct: 261 CVYCNEPNITDRGINFAVSMAFRAALSHIIHCKKC--KDIVTLVRTFSPSHFENGFWDTG 318
Query: 317 GSCNRTSPFSEKDIDYLGDFRWKLRNVQEREIERAREEAADGNKMFGVLDVTMAMLMRPD 376
GSCNRTSPFS+++ID+ W+LRNVQ EIERA + G K F LD+T AMLMRPD
Sbjct: 319 GSCNRTSPFSKQEIDFAAR-EWELRNVQVEEIERANRKRRQG-KRFKALDITRAMLMRPD 376
Query: 377 GHPGAFWDNKYMKGYNDCVHWCLPGPIDVWNDLLIQVLTKVG 418
GHPGA+W NK+MKGYNDCVHWCLPGPID+WNDLL+ VL + G
Sbjct: 377 GHPGAYWGNKWMKGYNDCVHWCLPGPIDLWNDLLLTVLRRHG 418
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224141311|ref|XP_002324017.1| predicted protein [Populus trichocarpa] gi|222867019|gb|EEF04150.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|296087706|emb|CBI34962.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|225452538|ref|XP_002275185.1| PREDICTED: uncharacterized protein LOC100257711 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|147844703|emb|CAN82134.1| hypothetical protein VITISV_002644 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|356550921|ref|XP_003543831.1| PREDICTED: uncharacterized protein LOC100806002 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|449459418|ref|XP_004147443.1| PREDICTED: uncharacterized protein LOC101218871 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|356573398|ref|XP_003554848.1| PREDICTED: uncharacterized protein LOC100795496 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|224115394|ref|XP_002317022.1| predicted protein [Populus trichocarpa] gi|222860087|gb|EEE97634.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|15232914|ref|NP_189454.1| protein trichome birefringence-like 22 [Arabidopsis thaliana] gi|11994133|dbj|BAB01135.1| unnamed protein product [Arabidopsis thaliana] gi|17979061|gb|AAL49798.1| unknown protein [Arabidopsis thaliana] gi|21436103|gb|AAM51298.1| unknown protein [Arabidopsis thaliana] gi|332643888|gb|AEE77409.1| protein trichome birefringence-like 22 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 421 | ||||||
| TAIR|locus:2091388 | 414 | TBL22 "AT3G28150" [Arabidopsis | 0.826 | 0.840 | 0.580 | 1.2e-115 | |
| TAIR|locus:2146062 | 526 | TBL21 "AT5G15890" [Arabidopsis | 0.802 | 0.642 | 0.414 | 5.7e-75 | |
| TAIR|locus:2035342 | 456 | TBL25 "AT1G01430" [Arabidopsis | 0.807 | 0.745 | 0.418 | 2.5e-74 | |
| TAIR|locus:2128489 | 430 | TBL24 "AT4G23790" [Arabidopsis | 0.814 | 0.797 | 0.407 | 4e-74 | |
| TAIR|locus:2136113 | 432 | TBL23 "AT4G11090" [Arabidopsis | 0.874 | 0.851 | 0.395 | 1.6e-72 | |
| TAIR|locus:2125048 | 442 | TBL26 "AT4G01080" [Arabidopsis | 0.788 | 0.751 | 0.426 | 2.5e-72 | |
| TAIR|locus:2146077 | 426 | TBL19 "AT5G15900" [Arabidopsis | 0.812 | 0.802 | 0.389 | 3.7e-71 | |
| TAIR|locus:2020628 | 416 | TBL27 "TRICHOME BIREFRINGENCE- | 0.817 | 0.826 | 0.392 | 2.1e-70 | |
| TAIR|locus:2153077 | 501 | YLS7 "AT5G51640" [Arabidopsis | 0.838 | 0.704 | 0.365 | 3.1e-60 | |
| TAIR|locus:2138043 | 533 | TBL18 "AT4G25360" [Arabidopsis | 0.843 | 0.666 | 0.366 | 2.2e-59 |
| TAIR|locus:2091388 TBL22 "AT3G28150" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1140 (406.4 bits), Expect = 1.2e-115, P = 1.2e-115
Identities = 205/353 (58%), Positives = 248/353 (70%)
Query: 66 KIDVEECDLFKGRWVPDFRGSQYTNWSCPTIPVSKNCFRHGRKDTDFLNWRWKPHNCDLP 125
+ID ECDLFKG WVPD RGS YTN SC TIP SKNC + GR D DFL WRWKP CDLP
Sbjct: 65 QID-PECDLFKGHWVPDKRGSLYTNSSCATIPDSKNCIKQGRPDKDFLFWRWKPDGCDLP 123
Query: 126 RFDAKQFLAFVRGKKLAFIGDSVARNHMESLLCLLSQEEVPIDAYKDSEDRHRIWYFADH 185
RF+ K FL+ VRGKK+ FIGDSVARNHMESLLCLLS EE P D YKD EDR+RIWYF H
Sbjct: 124 RFNPKAFLSMVRGKKMNFIGDSVARNHMESLLCLLSMEETPKDIYKDGEDRNRIWYFPKH 183
Query: 186 DFTLSILWSKFLVLGEERV-INGSSSGIYDLYLDKVDDRWASDLPYVDYAIISTAHWFFR 244
DFTLS W+KFLV ER N + +G++DL + K+D+ W + LP D AI+S AHWFFR
Sbjct: 184 DFTLSTSWTKFLVEERERRDSNNTGTGLFDLDIGKIDEGWFNGLPNTDIAIVSAAHWFFR 243
Query: 245 PIHVHDGGKVIGCVFCNEPNVRPMDPLDAIGLAFRAILRYINQCKQCNKRKMLALFRTFS 304
PI +H G + +GC++CN PN+ + P + L + A+LR IN+C+ C K+ ++ + RT S
Sbjct: 244 PIFIHRGDETLGCIYCNLPNMTQISPEEGFKLVYSAVLRQINECEMC-KKDLVTVLRTIS 302
Query: 305 PAHFEHGAWDTGGSCNRTSPFSEKDIDYLGDFRWKLRNVQXXXXXXXXXXXXDGNKMFGV 364
PAHFE+G WDTGG+C+RTSPF E ID L K+R Q K F V
Sbjct: 303 PAHFENGTWDTGGTCSRTSPFGENKID-LQSNEMKIRKSQIEQLEGITKRGNKAKK-FAV 360
Query: 365 LDVTMAMLMRPDGHPGAFWDNKYMKGYNDCVHWCLPGPIDVWNDLLIQVLTKV 417
LDVT M MRPDGHP +W NK+MKGYNDCVHWCLPGPID WND L+ ++ ++
Sbjct: 361 LDVTRVMQMRPDGHPNGYWGNKWMKGYNDCVHWCLPGPIDAWNDFLMAIIRQL 413
|
|
| TAIR|locus:2146062 TBL21 "AT5G15890" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2035342 TBL25 "AT1G01430" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2128489 TBL24 "AT4G23790" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2136113 TBL23 "AT4G11090" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2125048 TBL26 "AT4G01080" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2146077 TBL19 "AT5G15900" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2020628 TBL27 "TRICHOME BIREFRINGENCE-LIKE 27" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2153077 YLS7 "AT5G51640" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2138043 TBL18 "AT4G25360" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 421 | |||
| pfam13839 | 270 | pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Estera | 2e-81 | |
| PLN02629 | 387 | PLN02629, PLN02629, powdery mildew resistance 5 | 3e-38 | |
| pfam14416 | 55 | pfam14416, PMR5N, PMR5 N terminal Domain | 9e-23 |
| >gnl|CDD|222410 pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p | Back alignment and domain information |
|---|
Score = 251 bits (643), Expect = 2e-81
Identities = 100/291 (34%), Positives = 146/291 (50%), Gaps = 21/291 (7%)
Query: 124 LPRFDAKQFLAFVRGKKLAFIGDSVARNHMESLLCLLSQEEVPIDAYKDSEDRHRIWYFA 183
LPRFDA+QFL +RGK++ F+GDS++RN ESL+CLLSQ E P + + R + F
Sbjct: 1 LPRFDAQQFLERLRGKRVVFVGDSLSRNQWESLVCLLSQVEPPKGKTLERDGRLFRFRFK 60
Query: 184 DHDFTLSILWSKFLVLGEERVINGSSSGIYDLYLDKVDDRWASDLPYVDYAIISTAHWFF 243
D++ T+ WS FLV + + G L LD +D++W+ P D + ++ HW+
Sbjct: 61 DYNVTIEFYWSPFLV-----ESDNAEEGKRVLKLDSIDEKWSKLWPGADVLVFNSGHWWL 115
Query: 244 RPIHVHDGGKVIGCVFCNEPNVRPMDPLDAIGLAFRAILRYINQCKQCNKRKMLALFRTF 303
IG +C + N + M LDA A ++++ K FRTF
Sbjct: 116 H------RKVYIGWDYCQKSNYKEMGFLDAYRKALETWAKWVDVNL--PPSKTRVFFRTF 167
Query: 304 SPAHFEHGAWDTGGSCNRTSPFSEKDIDYLGDFRWKLRNVQEREIERAREEAADGNKMFG 363
SP HFE G W+TGGSC T P ++ ++ + RA +
Sbjct: 168 SPVHFEGGEWNTGGSCYETEPLLGS---EYKGLTPEMIDIVNEVLSRAAMKTP-----VK 219
Query: 364 VLDVTMAMLMRPDGHPGAFWDNKYMKGYNDCVHWCLPGPIDVWNDLLIQVL 414
+LD+T+ R DGHP + K DC+HWCLPG D WN+LL+ +L
Sbjct: 220 LLDITLLSQYRKDGHPSVYRKPGPPKKEQDCLHWCLPGVPDTWNELLLALL 270
|
The PC-Esterase family is comprised of Cas1p, the Homo sapiens C7orf58, Arabidopsis thaliana PMR5 and a group of plant freezing resistance/coldacclimatization proteins typified by Arabidopsis thaliana ESKIMO1, animal FAM55D proteins, and animal FAM113 proteins. The PC-Esterase family has features that are both similar and different from the canonical GDSL/SGNH superfamily. The members of this family are predicted to have Acyl esterase activity and predicted to modify cell-surface biopolymers such as glycans and glycoproteins. The Cas1p protein has a Cas1_AcylT domain, in addition, with the opposing acyltransferase activity. The C7orf58 family has a ATP-Grasp domain fused to the PC-Esterase and is the first identified secreted tubulin-tyrosine ligase like enzyme in eukaryotes. The plant family with PMR5, ESK1, TBL3 etc have a N-terminal C rich potential sugar binding domain followed by the PC-Esterase domain. Length = 270 |
| >gnl|CDD|215338 PLN02629, PLN02629, powdery mildew resistance 5 | Back alignment and domain information |
|---|
| >gnl|CDD|206583 pfam14416, PMR5N, PMR5 N terminal Domain | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 421 | |||
| PLN02629 | 387 | powdery mildew resistance 5 | 100.0 | |
| PF13839 | 263 | PC-Esterase: GDSL/SGNH-like Acyl-Esterase family f | 100.0 | |
| PF14416 | 55 | PMR5N: PMR5 N terminal Domain | 99.93 | |
| cd01842 | 183 | SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SG | 98.1 | |
| cd01829 | 200 | SGNH_hydrolase_peri2 SGNH_peri2; putative periplas | 95.6 | |
| cd01834 | 191 | SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SG | 92.99 | |
| cd01827 | 188 | sialate_O-acetylesterase_like1 sialate O-acetylest | 84.86 | |
| cd01841 | 174 | NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfa | 84.17 | |
| cd01836 | 191 | FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, Fee | 81.82 |
| >PLN02629 powdery mildew resistance 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-109 Score=833.09 Aligned_cols=324 Identities=31% Similarity=0.592 Sum_probs=272.5
Q ss_pred CCCCCCCcCcCCceeeCCCCCCCCCCCCC-CCCCCCCcccCCCCCcccccceeccCCCCCCCcCHHHHHHHHcCCeEEEE
Q 014612 66 KIDVEECDLFKGRWVPDFRGSQYTNWSCP-TIPVSKNCFRHGRKDTDFLNWRWKPHNCDLPRFDAKQFLAFVRGKKLAFI 144 (421)
Q Consensus 66 ~~~~~~Cd~~~G~WV~d~~~plY~~~~Cp-~i~~~~~C~~nGRpD~~y~~WrWqP~~C~Lprfd~~~fl~~lrgK~i~FV 144 (421)
+.+.++||+|+|+||+|+++|+|++++|| ||++++||++|||||++|++|||||++|+||||||.+||++|||||||||
T Consensus 47 ~~~~~~CD~f~G~WV~D~s~PlY~~~~Cp~fi~~~~nC~knGRPD~~Yl~WRWqP~gC~LPRFda~~fLe~~RgKrl~FV 126 (387)
T PLN02629 47 QANQSTCALFVGTWVRDDSYPLYQSSDCPGVIDPEFNCQMYGRPDSDYLKYRWQPLNCELPRFNGLEFLLKMKGKTVMFV 126 (387)
T ss_pred CCCccccCCCCCeEecCCCCCCCCCCCCccccccccchhhcCCCCcchhhccccCCCCCCCCcCHHHHHHHhcCCeEEEe
Confidence 45678899999999999999999999999 99999999999999999999999999999999999999999999999999
Q ss_pred ecchhHHHHHHHHHhhccccCCcc-eeecCCCCeeEEEEeecceEEEEEEeccccccccccccCCCCceeeeeecccccc
Q 014612 145 GDSVARNHMESLLCLLSQEEVPID-AYKDSEDRHRIWYFADHDFTLSILWSKFLVLGEERVINGSSSGIYDLYLDKVDDR 223 (421)
Q Consensus 145 GDSl~Rn~~~SL~ClL~~~~~p~~-~~~~~~~~~~~~~f~~~n~tv~f~wspfLv~~~~~~~~~~~~~~~~l~ld~~~~~ 223 (421)
||||+|||||||+|||++ ++|.. ......++.++|+|++||+||+||||||||+.+... +...|+||+++.
T Consensus 127 GDSL~RNQ~eSLvClL~~-~~p~~~~~~~~~~~~~~~~F~~yN~TV~~ywspfLV~~~~~~------~~~~l~LD~id~- 198 (387)
T PLN02629 127 GDSLGRNQWESLICLISS-SVPSTRTQMSRGDPLSTFKFLDYGVSISFYKAPYLVDIDAVQ------GKRVLKLEEISG- 198 (387)
T ss_pred ccccchhHHHHHHHHhhc-cCCCCceeeecCCceEEEEeccCCEEEEEEecceEEeeecCC------CceeEEecCcch-
Confidence 999999999999999996 45533 333345667899999999999999999999986543 234688888775
Q ss_pred cccCCCCccEEEEccccccccceeeecCCeEeeeecC--CCCCCCCCCHHHHHHHHHHHHHHHHHhccccCCCcceEEEE
Q 014612 224 WASDLPYVDYAIISTAHWFFRPIHVHDGGKVIGCVFC--NEPNVRPMDPLDAIGLAFRAILRYINQCKQCNKRKMLALFR 301 (421)
Q Consensus 224 W~~~~~~~DvlV~ntG~Ww~~~~~~~~~g~~~g~~~~--~~~~~~~~~~~~Ayr~al~t~~~~v~~~~~~~~~~t~VffR 301 (421)
++..+..+|||||||||||.++. .++||.++ ...++++|++.+||++||+||++||+++.+. .+|+||||
T Consensus 199 ~a~~w~~~DvlVfntghWw~~~~------~~~~~~~~~~g~~~~~~~~~~~A~r~al~T~~~wv~~~~~~--~kt~vffr 270 (387)
T PLN02629 199 NANAWRDADVLIFNTGHWWSHQG------SLQGWDYIESGGTYYQDMDRLVALEKALRTWAYWVDTNVDR--SRTRVFFQ 270 (387)
T ss_pred hhhhhccCCEEEEeCccccCCCC------eeEEeeeeccCCccccCccHHHHHHHHHHHHHHHHHhcCCC--CCcEEEEE
Confidence 36667779999999999999864 34566554 3455889999999999999999999876543 38999999
Q ss_pred ecCCCCCCCCCCCCCC-----CCC-cccCCCCCCccccCcchHHhhHHHHHHHHHHHHHhhcCCCeeeEeeccccccCCC
Q 014612 302 TFSPAHFEHGAWDTGG-----SCN-RTSPFSEKDIDYLGDFRWKLRNVQEREIERAREEAADGNKMFGVLDVTMAMLMRP 375 (421)
Q Consensus 302 t~SP~Hf~~g~W~~gg-----~C~-~t~P~~~~~~~~~~~~~~~~~~i~~e~~~~~~~~~~~~~~~v~lLDIT~ls~~R~ 375 (421)
|+||+||+||+||+|| +|+ +|+|+.++++ .++...+++ ++|++.+ .+ +.+|+|||||+||++||
T Consensus 271 T~SP~Hfe~g~Wn~gg~~~~~~C~~et~P~~~~~~--~~~~~~~~~--~ve~v~~---~~---~~~v~lLDIT~ls~lR~ 340 (387)
T PLN02629 271 SISPTHYNPSEWSAGASTTTKNCYGETTPMSGMTY--PGAYPDQMR--VVDEVIR---GM---HNPAYLLDITLLSELRK 340 (387)
T ss_pred ecCcccccCCCcCCCCCCCCCCCccCCccCcCccc--cCcchHHHH--HHHHHHH---hc---CCceEEEechhhhhcCC
Confidence 9999999999999875 586 8999975443 444444443 3333332 23 68999999999999999
Q ss_pred CCCCCCCCC------CCCCCCCCCccccccCCcchHHHHHHHHHHH
Q 014612 376 DGHPGAFWD------NKYMKGYNDCVHWCLPGPIDVWNDLLIQVLT 415 (421)
Q Consensus 376 DaHps~y~~------~~~~~~~~DC~HWCLPGv~D~WNelL~~~L~ 415 (421)
|||||+|++ .+++..++||+||||||||||||||||++|.
T Consensus 341 DgHPs~Y~~~~~~~~~~~p~~~~DC~HWCLPGvpDTWNelL~a~L~ 386 (387)
T PLN02629 341 DGHPSIYSGDLSPSQRANPDRSADCSHWCLPGLPDTWNQLFYTALF 386 (387)
T ss_pred CCCcccccCCCchhhccCCCCCCCcccccCCCCCccHHHHHHHHHh
Confidence 999999952 2345678999999999999999999999986
|
|
| >PF13839 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p | Back alignment and domain information |
|---|
| >PF14416 PMR5N: PMR5 N terminal Domain | Back alignment and domain information |
|---|
| >cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily | Back alignment and domain information |
|---|
| >cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily | Back alignment and domain information |
|---|
| >cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 421 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-05 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 46.4 bits (109), Expect = 2e-05
Identities = 59/437 (13%), Positives = 112/437 (25%), Gaps = 184/437 (42%)
Query: 2 KSSSSSSLSQDK----------FYINAHGGMGRLGSFLFYSLALTTVFSFFLLFSPNSVK 51
K+ + + F++N + S L + PN
Sbjct: 163 KTWVALDVCLSYKVQCKMDFKIFWLN----LKNCNS---PETVLEMLQKLLYQIDPNW-T 214
Query: 52 ILPKSSVHYDQGREKIDVEECDLFKGRWVPDFRGSQYTN--------WS----------C 93
S + I E L K + Y N + C
Sbjct: 215 SRSDHSSNIKLRIHSIQAELRRLLKSK--------PYENCLLVLLNVQNAKAWNAFNLSC 266
Query: 94 PTIPVSKNCFRHGRKDTDFLNWRWKPH-----------------------NC---DLPRF 127
+ ++ ++ TDFL+ H +C DLPR
Sbjct: 267 KILLTTRF-----KQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPR- 320
Query: 128 DAKQFLAFVRGKKLAFIG----DSVAR-NHMESLLC--LLSQEEVPIDAYKDSEDRHRIW 180
+ L+ I D +A ++ + + C L + E ++ + +E R
Sbjct: 321 EVLTTNPRR----LSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFD 376
Query: 181 YFA----DHDF---TLSILWSKFLVLGEERVING-------------SSSGIYDLYLD-- 218
+ LS++W + V+N S+ I +YL+
Sbjct: 377 RLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELK 436
Query: 219 -KVDDRWASDLPYVDYAIISTAHWFFRPIHVHDGGKVIGCVF---CNEPNVRPMDPLDAI 274
K+++ +A +H ++ + + LD
Sbjct: 437 VKLENEYA----------------------LHR--SIVDHYNIPKTFDSDDLIPPYLD-- 470
Query: 275 GLAFRAILRYINQ-----CKQCNKRKMLALFRTFSPAHFEHGAWDTGGSCNRTSPFSEKD 329
+Y K + + LFR
Sbjct: 471 --------QYFYSHIGHHLKNIEHPERMTLFRMV-------------------------- 496
Query: 330 IDYLGDFRW---KLRNV 343
+L DFR+ K+R+
Sbjct: 497 --FL-DFRFLEQKIRHD 510
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 421 | |||
| 4h08_A | 200 | Putative hydrolase; GDSL-like lipase/acylhydrolase | 95.83 |
| >4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=95.83 E-value=0.012 Score=52.45 Aligned_cols=51 Identities=12% Similarity=0.144 Sum_probs=37.0
Q ss_pred CccEEEEccccccccceeeecCCeEeeeecCCCCCCCCCCHHHHHHHHHHHHHHHHHhccccCCCcceEEEEecCCCCC
Q 014612 230 YVDYAIISTAHWFFRPIHVHDGGKVIGCVFCNEPNVRPMDPLDAIGLAFRAILRYINQCKQCNKRKMLALFRTFSPAHF 308 (421)
Q Consensus 230 ~~DvlV~ntG~Ww~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~Ayr~al~t~~~~v~~~~~~~~~~t~VffRt~SP~Hf 308 (421)
.+|+|||+.|..=. ....+.|+..|+++++.+.+.. + +++|+|-+..|...
T Consensus 74 ~pd~Vvi~~G~ND~------------------------~~~~~~~~~~l~~ii~~l~~~~---p-~~~ii~~~~~P~~~ 124 (200)
T 4h08_A 74 KFDVIHFNNGLHGF------------------------DYTEEEYDKSFPKLIKIIRKYA---P-KAKLIWANTTPVRT 124 (200)
T ss_dssp CCSEEEECCCSSCT------------------------TSCHHHHHHHHHHHHHHHHHHC---T-TCEEEEECCCCCEE
T ss_pred CCCeEEEEeeeCCC------------------------CCCHHHHHHHHHHHHHHHhhhC---C-CccEEEeccCCCcc
Confidence 48999999985410 0125789999999998886652 2 67899999888654
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 421 | |||
| d3dc7a1 | 207 | Uncharacterized protein Lp3323 {Lactobacillus plan | 96.12 | |
| d2o14a2 | 208 | Hypothetical protein YxiM {Bacillus subtilis [TaxI | 96.0 | |
| d3bzwa1 | 248 | Uncharacterized protein BT2961 {Bacteroides thetai | 80.85 |
| >d3dc7a1 c.23.10.9 (A:18-224) Uncharacterized protein Lp3323 {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: SGNH hydrolase family: BT2961-like domain: Uncharacterized protein Lp3323 species: Lactobacillus plantarum [TaxId: 1590]
Probab=96.12 E-value=0.012 Score=49.64 Aligned_cols=13 Identities=38% Similarity=0.621 Sum_probs=11.7
Q ss_pred cCCeEEEEecchh
Q 014612 137 RGKKLAFIGDSVA 149 (421)
Q Consensus 137 rgK~i~FVGDSl~ 149 (421)
..|||+|+|||++
T Consensus 3 ~~kri~~iGDSit 15 (207)
T d3dc7a1 3 SFKRPAWLGDSIT 15 (207)
T ss_dssp CCSSEEEEESTTT
T ss_pred CCCEEEEEehHhh
Confidence 4689999999997
|
| >d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
| >d3bzwa1 c.23.10.9 (A:38-285) Uncharacterized protein BT2961 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|