BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014614
(421 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9CYI4|LUC7L_MOUSE Putative RNA-binding protein Luc7-like 1 OS=Mus musculus GN=Luc7l
PE=2 SV=2
Length = 371
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 76/114 (66%), Gaps = 10/114 (8%)
Query: 210 EMINEKLKKAEDLGEQGMVDEAQKALEEAEALKKLPARQEPTLDSSKYTAADVRITDQKL 269
E I + L KAE LG +G VDE+QK L E E K+ A+++ + + + QKL
Sbjct: 131 EEIGKLLAKAEQLGAEGNVDESQKILMEVE---KVRAKKKEAEEEYRNSMPASSFQQQKL 187
Query: 270 RVCDICGAFLSVYDSDRRLADHFGGKLHLGYMQIRDKL-------AELQEERNK 316
RVC++C A+L ++D+DRRLADHFGGKLHLG++QIR+KL AE QE+RN+
Sbjct: 188 RVCEVCSAYLGLHDNDRRLADHFGGKLHLGFIQIREKLDQLRKTVAEKQEKRNQ 241
Score = 93.2 bits (230), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 88/164 (53%), Gaps = 4/164 (2%)
Query: 4 MRKQLDVLMGANRNGDVREVNRKYYDRDVCRLYLAGLCPHELFQLTKMDMGPCPKVHSLQ 63
MR LD LMG R+GD K+ D VC+ +L CPH++ T+MD+G C K+H L
Sbjct: 7 MRALLDQLMGTARDGDETRQRVKFTDDRVCKSHLLDCCPHDILAGTRMDLGECTKIHDLA 66
Query: 64 LRKEYEEAKAKGVDNYDRELEDAIDRLIVECDRKIGRALKRLEDDDAKAAIAISVSEVTQ 123
LR +YE A + ++ + D ++ I ECDR+ A KRL A+ IS +
Sbjct: 67 LRADYEIASKERDLFFELDAMDHLESFIAECDRRTELAKKRL----AETQEEISAEVSAK 122
Query: 124 TPEVLELSKQIKEKLKETDQYDYEGKTDLKIRALEVVEELRTKR 167
+V EL+++I + L + +Q EG D + L VE++R K+
Sbjct: 123 AEKVHELNEEIGKLLAKAEQLGAEGNVDESQKILMEVEKVRAKK 166
>sp|Q9NQ29|LUC7L_HUMAN Putative RNA-binding protein Luc7-like 1 OS=Homo sapiens GN=LUC7L
PE=1 SV=1
Length = 371
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 76/114 (66%), Gaps = 10/114 (8%)
Query: 210 EMINEKLKKAEDLGEQGMVDEAQKALEEAEALKKLPARQEPTLDSSKYTAADVRITDQKL 269
E I + L KAE LG +G VDE+QK L E E K+ A+++ + + + QKL
Sbjct: 131 EEIGKLLAKAEQLGAEGNVDESQKILMEVE---KVRAKKKEAEEEYRNSMPASSFQQQKL 187
Query: 270 RVCDICGAFLSVYDSDRRLADHFGGKLHLGYMQIRDKL-------AELQEERNK 316
RVC++C A+L ++D+DRRLADHFGGKLHLG++QIR+KL AE QE+RN+
Sbjct: 188 RVCEVCSAYLGLHDNDRRLADHFGGKLHLGFIQIREKLDQLRKTVAEKQEKRNQ 241
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 88/164 (53%), Gaps = 4/164 (2%)
Query: 4 MRKQLDVLMGANRNGDVREVNRKYYDRDVCRLYLAGLCPHELFQLTKMDMGPCPKVHSLQ 63
MR LD LMG R+GD K+ D VC+ +L CPH++ T+MD+G C K+H L
Sbjct: 7 MRALLDQLMGTARDGDETRQRVKFTDDRVCKSHLLDCCPHDILAGTRMDLGECTKIHDLA 66
Query: 64 LRKEYEEAKAKGVDNYDRELEDAIDRLIVECDRKIGRALKRLEDDDAKAAIAISVSEVTQ 123
LR +YE A + ++ + D ++ I ECDR+ A KRL A+ IS +
Sbjct: 67 LRADYEIASKERDLFFELDAMDHLESFIAECDRRTELAKKRL----AETQEEISAEVSAK 122
Query: 124 TPEVLELSKQIKEKLKETDQYDYEGKTDLKIRALEVVEELRTKR 167
+V EL+++I + L + +Q EG D + L VE++R K+
Sbjct: 123 AEKVHELNEEIGKLLAKAEQLGAEGNVDESQKILMEVEKVRAKK 166
>sp|Q7TNC4|LC7L2_MOUSE Putative RNA-binding protein Luc7-like 2 OS=Mus musculus GN=Luc7l2
PE=1 SV=1
Length = 392
Score = 97.1 bits (240), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 78/126 (61%), Gaps = 13/126 (10%)
Query: 201 IPAPDARTQEM---INEKLKKAEDLGEQGMVDEAQKALEEAEALKKLPARQEPTLDSSKY 257
+ A R E+ I + L K E LG +G V+E+QK ++E E K A++ + +
Sbjct: 119 VAAKAERVHELNEEIGKLLAKVEQLGAEGNVEESQKVMDEVE---KARAKKREAEEVYRN 175
Query: 258 TAADVRITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLGYMQIRDKLAEL------- 310
+ QKLRVC++C A+L ++D+DRRLADHFGGKLHLG+++IR+KL EL
Sbjct: 176 SMPASSFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLGFIEIREKLEELKRVVAEK 235
Query: 311 QEERNK 316
QE+RN+
Sbjct: 236 QEKRNQ 241
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 87/164 (53%), Gaps = 4/164 (2%)
Query: 4 MRKQLDVLMGANRNGDVREVNRKYYDRDVCRLYLAGLCPHELFQLTKMDMGPCPKVHSLQ 63
MR LD LMG +R+GD K+ D VC+ +L CPH++ T+MD+G C KVH L
Sbjct: 7 MRAMLDQLMGTSRDGDTTRQRIKFSDDRVCKSHLLNCCPHDVLSGTRMDLGECLKVHDLA 66
Query: 64 LRKEYEEAKAKGVDNYDRELEDAIDRLIVECDRKIGRALKRLEDDDAKAAIAISVSEVTQ 123
LR +YE A + ++ + D + I +CDR+ + KRL A+ IS +
Sbjct: 67 LRADYEIASKEQDFFFELDAMDHLQSFIADCDRRTEVSKKRL----AETQEEISAEVAAK 122
Query: 124 TPEVLELSKQIKEKLKETDQYDYEGKTDLKIRALEVVEELRTKR 167
V EL+++I + L + +Q EG + + ++ VE+ R K+
Sbjct: 123 AERVHELNEEIGKLLAKVEQLGAEGNVEESQKVMDEVEKARAKK 166
>sp|Q9Y383|LC7L2_HUMAN Putative RNA-binding protein Luc7-like 2 OS=Homo sapiens GN=LUC7L2
PE=1 SV=2
Length = 392
Score = 96.7 bits (239), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 78/126 (61%), Gaps = 13/126 (10%)
Query: 201 IPAPDARTQEM---INEKLKKAEDLGEQGMVDEAQKALEEAEALKKLPARQEPTLDSSKY 257
+ A R E+ I + L K E LG +G V+E+QK ++E E K A++ + +
Sbjct: 119 VAAKAERVHELNEEIGKLLAKVEQLGAEGNVEESQKVMDEVE---KARAKKREAEEVYRN 175
Query: 258 TAADVRITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLGYMQIRDKLAEL------- 310
+ QKLRVC++C A+L ++D+DRRLADHFGGKLHLG+++IR+KL EL
Sbjct: 176 SMPASSFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLGFIEIREKLEELKRVVAEK 235
Query: 311 QEERNK 316
QE+RN+
Sbjct: 236 QEKRNQ 241
Score = 92.4 bits (228), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 87/164 (53%), Gaps = 4/164 (2%)
Query: 4 MRKQLDVLMGANRNGDVREVNRKYYDRDVCRLYLAGLCPHELFQLTKMDMGPCPKVHSLQ 63
MR LD LMG +R+GD K+ D VC+ +L CPH++ T+MD+G C KVH L
Sbjct: 7 MRAMLDQLMGTSRDGDTTRQRIKFSDDRVCKSHLLNCCPHDVLSGTRMDLGECLKVHDLA 66
Query: 64 LRKEYEEAKAKGVDNYDRELEDAIDRLIVECDRKIGRALKRLEDDDAKAAIAISVSEVTQ 123
LR +YE A + ++ + D + I +CDR+ A KRL A+ IS +
Sbjct: 67 LRADYEIASKEQDFFFELDAMDHLQSFIADCDRRTEVAKKRL----AETQEEISAEVAAK 122
Query: 124 TPEVLELSKQIKEKLKETDQYDYEGKTDLKIRALEVVEELRTKR 167
V EL+++I + L + +Q EG + + ++ VE+ R K+
Sbjct: 123 AERVHELNEEIGKLLAKVEQLGAEGNVEESQKVMDEVEKARAKK 166
>sp|Q54XQ8|LUC7L_DICDI Luc7-like protein OS=Dictyostelium discoideum GN=crop PE=3 SV=1
Length = 360
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 99/195 (50%), Gaps = 22/195 (11%)
Query: 1 MDAMRKQLDVLMGANRN---GDVREVNRKYYDRDVCRLYLAGLCPHELFQLTKM-DMGPC 56
MDA+R QLD +G +RN D +V + D D+C+ +L GLCPHELF + D+GPC
Sbjct: 1 MDAIRAQLDEFLGKDRNLLPKDRIKVENDFNDPDICKFFLCGLCPHELFTNANIRDLGPC 60
Query: 57 PKVHSLQLRKEYEEAKAKGVDNYDRELEDAIDRLIVECDRKIGRALKRL----EDDDAKA 112
K+H K+Y+ K K +Y+RE I+ LI + D+KI R +RL D
Sbjct: 61 SKLHDENCVKQYQNNKDKDKYDYEREWVRVIEGLISDNDKKIKRNKERLLQNPNGDANHH 120
Query: 113 AIAI---SVSEV-----------TQTPEVLELSKQIKEKLKETDQYDYEGKTDLKIRALE 158
I S+S++ Q ++ EL +I+E LK+ ++ EG+ +
Sbjct: 121 GGPIQQQSISQLDDEEGGLLPDKEQNSKITELDLKIQELLKKAEELGEEGQITEAQALMT 180
Query: 159 VVEELRTKRADKQSM 173
+EL+ ++ + + +
Sbjct: 181 EADELKNQKVELEKI 195
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 118/283 (41%), Gaps = 39/283 (13%)
Query: 139 KETDQYDYEGKTDLKIRALEVVEELRTKRADKQSMLLLDAFNKDRASLPQPLPNPP---- 194
K+ D+YDYE + +R +E + K+ + LL N D P+
Sbjct: 76 KDKDKYDYEREW---VRVIEGLISDNDKKIKRNKERLLQNPNGDANHHGGPIQQQSISQL 132
Query: 195 ---PLAPLPIPAPDARTQEM---INEKLKKAEDLGEQGMVDEAQKALEEAEALKKLPARQ 248
LP +++ E+ I E LKKAE+LGE+G + EAQ + EA+ LK
Sbjct: 133 DDEEGGLLPDKEQNSKITELDLKIQELLKKAEELGEEGQITEAQALMTEADELKNQKVEL 192
Query: 249 EPTLDSSKYTAADVRITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLGYMQIRDKLA 308
E ++++ VC+ICGA L V D ++R H GK H+G+ +IR+ +
Sbjct: 193 EKIEQEKN--------ENKRMSVCEICGALLFVGDKEKRSISHLEGKKHIGFQKIREVME 244
Query: 309 ELQEERNKKHKDRCD-------------DRRSKERSKDQDREPSRD-REKEASRDRDRGD 354
E + + + R D D R S D + RD R SRD D
Sbjct: 245 EYYKSGRRANLGRTDFYNAPPPPRDSYRDDRRSSSSSYHDIDGRRDHRYGGGSRDYGGSD 304
Query: 355 SRDRGRDYDRSSRDRDRYYD----RDRRYDRERDRDSDRHRSY 393
R G + RD Y + RD R D +D D R R Y
Sbjct: 305 RRGGGNYNNGRGSSRDNYNNINNSRDYRNDHGKDYDRKRERDY 347
>sp|Q5R8W6|LC7L3_PONAB Luc7-like protein 3 OS=Pongo abelii GN=LUC7L3 PE=2 SV=1
Length = 432
Score = 82.4 bits (202), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 88/169 (52%), Gaps = 2/169 (1%)
Query: 1 MDAMRKQLDVLMGANRN--GDVREVNRKYYDRDVCRLYLAGLCPHELFQLTKMDMGPCPK 58
M + + LD LMG +RN D + N ++ VC+ YL G CP ELF T+ D+GPC K
Sbjct: 1 MISAAQLLDELMGRDRNLAPDEKRSNVRWDHESVCKYYLCGFCPAELFTNTRSDLGPCEK 60
Query: 59 VHSLQLRKEYEEAKAKGVDNYDRELEDAIDRLIVECDRKIGRALKRLEDDDAKAAIAISV 118
+H LRK+YE++ Y+R+ + L+ E +R+I R RL + + +
Sbjct: 61 IHDENLRKQYEKSSRFMKVGYERDFLRYLQSLLAEVERRIRRGHARLALSQNQQSSGAAG 120
Query: 119 SEVTQTPEVLELSKQIKEKLKETDQYDYEGKTDLKIRALEVVEELRTKR 167
++ L+ +I L++ ++ EGK + +++VE+L+ +R
Sbjct: 121 PTGKNEEKIQVLTDKIDVLLQQIEELGSEGKVEEAQGMMKLVEQLKEER 169
Score = 72.4 bits (176), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 59/97 (60%), Gaps = 4/97 (4%)
Query: 216 LKKAEDLGEQGMVDEAQKALEEAEALKKLPARQEPTLDSSKYTAADVRITDQKLRVCDIC 275
L++ E+LG +G V+EAQ ++ E LK+ + L S+ T ++++ VC++C
Sbjct: 140 LQQIEELGSEGKVEEAQGMMKLVEQLKE----ERELLRSTTSTIESFAAQEKQMEVCEVC 195
Query: 276 GAFLSVYDSDRRLADHFGGKLHLGYMQIRDKLAELQE 312
GAFL V D+ R+ DH GK H+GY +I+ + EL+E
Sbjct: 196 GAFLIVGDAQSRVDDHLMGKQHMGYAKIKATVEELKE 232
>sp|O95232|LC7L3_HUMAN Luc7-like protein 3 OS=Homo sapiens GN=LUC7L3 PE=1 SV=2
Length = 432
Score = 82.4 bits (202), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 88/169 (52%), Gaps = 2/169 (1%)
Query: 1 MDAMRKQLDVLMGANRN--GDVREVNRKYYDRDVCRLYLAGLCPHELFQLTKMDMGPCPK 58
M + + LD LMG +RN D + N ++ VC+ YL G CP ELF T+ D+GPC K
Sbjct: 1 MISAAQLLDELMGRDRNLAPDEKRSNVRWDHESVCKYYLCGFCPAELFTNTRSDLGPCEK 60
Query: 59 VHSLQLRKEYEEAKAKGVDNYDRELEDAIDRLIVECDRKIGRALKRLEDDDAKAAIAISV 118
+H LRK+YE++ Y+R+ + L+ E +R+I R RL + + +
Sbjct: 61 IHDENLRKQYEKSSRFMKVGYERDFLRYLQSLLAEVERRIRRGHARLALSQNQQSSGAAG 120
Query: 119 SEVTQTPEVLELSKQIKEKLKETDQYDYEGKTDLKIRALEVVEELRTKR 167
++ L+ +I L++ ++ EGK + +++VE+L+ +R
Sbjct: 121 PTGKNEEKIQVLTDKIDVLLQQIEELGSEGKVEEAQGMMKLVEQLKEER 169
Score = 72.4 bits (176), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 59/97 (60%), Gaps = 4/97 (4%)
Query: 216 LKKAEDLGEQGMVDEAQKALEEAEALKKLPARQEPTLDSSKYTAADVRITDQKLRVCDIC 275
L++ E+LG +G V+EAQ ++ E LK+ + L S+ T ++++ VC++C
Sbjct: 140 LQQIEELGSEGKVEEAQGMMKLVEQLKE----ERELLRSTTSTIESFAAQEKQMEVCEVC 195
Query: 276 GAFLSVYDSDRRLADHFGGKLHLGYMQIRDKLAELQE 312
GAFL V D+ R+ DH GK H+GY +I+ + EL+E
Sbjct: 196 GAFLIVGDAQSRVDDHLMGKQHMGYAKIKATVEELKE 232
>sp|Q5SUF2|LC7L3_MOUSE Luc7-like protein 3 OS=Mus musculus GN=Luc7l3 PE=1 SV=1
Length = 432
Score = 82.4 bits (202), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 88/169 (52%), Gaps = 2/169 (1%)
Query: 1 MDAMRKQLDVLMGANRN--GDVREVNRKYYDRDVCRLYLAGLCPHELFQLTKMDMGPCPK 58
M + + LD LMG +RN D + N ++ VC+ YL G CP ELF T+ D+GPC K
Sbjct: 1 MISAAQLLDELMGRDRNLAPDEKRSNVRWDHESVCKYYLCGFCPAELFTNTRSDLGPCEK 60
Query: 59 VHSLQLRKEYEEAKAKGVDNYDRELEDAIDRLIVECDRKIGRALKRLEDDDAKAAIAISV 118
+H LRK+YE++ Y+R+ + L+ E +R+I R RL + + +
Sbjct: 61 IHDENLRKQYEKSSRFMKVGYERDFLRYLQSLLAEVERRIRRGHARLALSQNQQSSGAAG 120
Query: 119 SEVTQTPEVLELSKQIKEKLKETDQYDYEGKTDLKIRALEVVEELRTKR 167
++ L+ +I L++ ++ EGK + +++VE+L+ +R
Sbjct: 121 PTGKNEEKIQVLTDKIDVLLQQIEELGSEGKVEEAQGMMKLVEQLKEER 169
Score = 72.4 bits (176), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 64/106 (60%), Gaps = 4/106 (3%)
Query: 212 INEKLKKAEDLGEQGMVDEAQKALEEAEALKKLPARQEPTLDSSKYTAADVRITDQKLRV 271
I+ L++ E+LG +G V+EAQ ++ E LK+ + L S+ T ++++ V
Sbjct: 136 IDVLLQQIEELGSEGKVEEAQGMMKLVEQLKE----ERELLRSTTSTIESFAAQEKQMEV 191
Query: 272 CDICGAFLSVYDSDRRLADHFGGKLHLGYMQIRDKLAELQEERNKK 317
C++CGAFL V D+ R+ DH GK H+GY +I+ + EL+E+ K+
Sbjct: 192 CEVCGAFLIVGDAQSRVDDHLMGKQHMGYAKIKATVEELKEKLRKR 237
>sp|Q3SX41|LC7L3_BOVIN Luc7-like protein 3 OS=Bos taurus GN=LUC7L3 PE=2 SV=1
Length = 432
Score = 82.0 bits (201), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 88/169 (52%), Gaps = 2/169 (1%)
Query: 1 MDAMRKQLDVLMGANRN--GDVREVNRKYYDRDVCRLYLAGLCPHELFQLTKMDMGPCPK 58
M + + LD LMG +RN D + N ++ VC+ YL G CP ELF T+ D+GPC K
Sbjct: 1 MISAAQLLDELMGRDRNLAPDEKRSNVRWDHESVCKYYLCGFCPAELFTNTRSDLGPCEK 60
Query: 59 VHSLQLRKEYEEAKAKGVDNYDRELEDAIDRLIVECDRKIGRALKRLEDDDAKAAIAISV 118
+H LRK+YE++ Y+R+ + L+ E +R+I R RL + + +
Sbjct: 61 IHDENLRKQYEKSSRFMKVGYERDFLRYLQSLLAEVERRIRRGHARLALSQNQQSSGAAG 120
Query: 119 SEVTQTPEVLELSKQIKEKLKETDQYDYEGKTDLKIRALEVVEELRTKR 167
++ L+ +I L++ ++ EGK + +++VE+L+ +R
Sbjct: 121 PTGKNEEKIQVLTDKIDVLLQQIEELGSEGKVEEAQGMMKLVEQLKEER 169
Score = 72.4 bits (176), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 59/97 (60%), Gaps = 4/97 (4%)
Query: 216 LKKAEDLGEQGMVDEAQKALEEAEALKKLPARQEPTLDSSKYTAADVRITDQKLRVCDIC 275
L++ E+LG +G V+EAQ ++ E LK+ + L S+ T ++++ VC++C
Sbjct: 140 LQQIEELGSEGKVEEAQGMMKLVEQLKE----ERELLRSTTSTIESFAAQEKQMEVCEVC 195
Query: 276 GAFLSVYDSDRRLADHFGGKLHLGYMQIRDKLAELQE 312
GAFL V D+ R+ DH GK H+GY +I+ + EL+E
Sbjct: 196 GAFLIVGDAQSRVDDHLMGKQHMGYAKIKATVEELKE 232
>sp|Q9USM4|LUC7_SCHPO U1 snRNP-associated protein usp106 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=usp106 PE=1 SV=1
Length = 264
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 61/97 (62%)
Query: 5 RKQLDVLMGANRNGDVREVNRKYYDRDVCRLYLAGLCPHELFQLTKMDMGPCPKVHSLQL 64
RK ++ LMG+N + + DR VCR +L G+CPH++F TKMD+GPCPK+HS +L
Sbjct: 6 RKIIEQLMGSNLSNFTSRGLVHFTDRKVCRSFLCGICPHDIFTNTKMDLGPCPKIHSDKL 65
Query: 65 RKEYEEAKAKGVDNYDRELEDAIDRLIVECDRKIGRA 101
+ +YE A Y+ + + ++R + +C+++I A
Sbjct: 66 KSDYERASYSHDYGYEWDYLEDLERHVDDCNKRIDIA 102
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 68/127 (53%), Gaps = 2/127 (1%)
Query: 208 TQEMINEKLKKAEDLGEQGMVDEAQKALEEAEALKKLPARQEPTLDSSKYTAADVRITDQ 267
T I + + E L ++ +V++A K E LK + S + T Q
Sbjct: 126 TDHSIEVIITEMEALAKRKLVNDAVKHFIELNRLKTYRKELYDEVISMNEIPSQASTTHQ 185
Query: 268 KLRVCDICGAFLSVYDSDRRLADHFGGKLHLGYMQIRDKLAELQEERNKKHKDRCDDRRS 327
KL+VCDIC A+LS D+DRRLADHF GK+HLGY +R+ +L+ + + K R D++
Sbjct: 186 KLQVCDICSAYLSRLDNDRRLADHFSGKMHLGYAMLRNIARDLRAQLEDREKSR--DKKD 243
Query: 328 KERSKDQ 334
E+ +D
Sbjct: 244 GEKQRDN 250
>sp|Q07508|LUC7_YEAST Protein LUC7 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=LUC7 PE=1 SV=1
Length = 261
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Query: 229 DEAQKALEEAEALKKLPARQEPTLDSSKYTAADV-RITDQKLRVCDICGAFLSVYDSDRR 287
DE + ++ L++L ++++ + +V + QKL+VC++CGA+LS D+DRR
Sbjct: 157 DEVSMGMLQSVKLQELISKRKEVAKRVRNITENVGQSAQQKLQVCEVCGAYLSRLDTDRR 216
Query: 288 LADHFGGKLHLGYMQIRD 305
LADHF GK+HLGY+++R+
Sbjct: 217 LADHFLGKIHLGYVKMRE 234
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 61/105 (58%), Gaps = 5/105 (4%)
Query: 28 YDRDVCRLYLAGLCPHELFQLTKMDMGPCPKVHSLQLRKEYE-EAK-AKGVDNYDRELED 85
+D +C+ YL G CP++LFQ TK +G CP++H + + +YE E K K ++RE
Sbjct: 40 HDPKICKSYLVGECPYDLFQGTKQSLGKCPQMHLTKHKIQYEREVKQGKTFPEFEREYLA 99
Query: 86 AIDRLIVECDRKIGRALKRLEDDDAKAAIAISVSEVTQTPEVLEL 130
+ R + EC+ +I AL+ L+ A + + +VT+ +VL++
Sbjct: 100 ILSRFVNECNGQISVALQNLKHT---AEERMKIQQVTEELDVLDV 141
>sp|Q09217|YP68_CAEEL Uncharacterized protein B0495.8 OS=Caenorhabditis elegans
GN=B0495.8 PE=2 SV=1
Length = 313
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 71/128 (55%), Gaps = 5/128 (3%)
Query: 206 ARTQEMINEKLKKAEDLGEQGMVDEAQKALEEAEALKKLPARQEPTLDSSKYTAADVRIT 265
A +E I + + E LG +G ++E+ K + E L++ QE ++ A
Sbjct: 127 AEIEEKIAKNVDDIEKLGNEGKIEESMKLHKYVEELRE--KIQEIEDSQTEVKTAGPGSN 184
Query: 266 DQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLGYMQIRD---KLAELQEERNKKHKDRC 322
KLRVC+ CGA L++ D + R+ADH+ GK+H+G ++ R+ K+ E +ER K+ +++
Sbjct: 185 SAKLRVCEDCGAQLNITDHESRIADHYNGKMHIGMVETRETYLKMKETIDERRKEREEKL 244
Query: 323 DDRRSKER 330
+R +R
Sbjct: 245 GSQRGYQR 252
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 86/166 (51%), Gaps = 4/166 (2%)
Query: 2 DAMRKQLDVLMGANRNGDVREVNRKYYDRDVCRLYLAGLCPHELFQLTKM-DMGPCPKVH 60
D MR + LMG+ + + + + VCR +L G+CPH++ +++ ++ C KVH
Sbjct: 3 DQMRDMIAQLMGSQHVDNKEKPSMPFDHHSVCRAFLLGVCPHDMVPDSRLQNVVSCRKVH 62
Query: 61 SLQLRKEYEEAKAKGVDNYDRELEDAIDRLIVECDRKIGRALKRLEDDDAKAAIAISVSE 120
+ +YE A+ + YD + + I+ + D +I + ++LEDD S +
Sbjct: 63 EPAHKADYERAQKEKDHFYDVDAFEIIEHAVHLVDIEIAKVREKLEDD---VKTQTSQAA 119
Query: 121 VTQTPEVLELSKQIKEKLKETDQYDYEGKTDLKIRALEVVEELRTK 166
++ +V E+ ++I + + + ++ EGK + ++ + VEELR K
Sbjct: 120 DSKAKQVAEIEEKIAKNVDDIEKLGNEGKIEESMKLHKYVEELREK 165
>sp|O23212|U2A2A_ARATH Splicing factor U2af large subunit A OS=Arabidopsis thaliana
GN=U2AF65A PE=2 SV=2
Length = 573
Score = 41.6 bits (96), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 324 DRRSKERSKDQDREPSR--DREKEASRDRDRGDSRDRGRDYDRSSRDRDRYYDRDRRYDR 381
D + K S+D +RE SR DRE+E RD+DR +R + R SRDRD ++R D+
Sbjct: 34 DSKPKRESRDHERETSRSKDREREKGRDKDR----ERDSEVSRRSRDRDGEKSKERSRDK 89
Query: 382 ERDRDSDRHRSYDSRSH 398
+RD HRS R H
Sbjct: 90 DRDHRERHHRSSRHRDH 106
Score = 40.0 bits (92), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 38/63 (60%), Gaps = 8/63 (12%)
Query: 364 RSSRDRDRYYDRDRRYDRERDRDSDRHRSYDSRSHRRSRSR----SKERSRDYDR-HR-R 417
R SRD +R R + +RE+ RD DR R DS RRSR R SKERSRD DR HR R
Sbjct: 39 RESRDHERETSRSKDREREKGRDKDRER--DSEVSRRSRDRDGEKSKERSRDKDRDHRER 96
Query: 418 HDR 420
H R
Sbjct: 97 HHR 99
>sp|F1QBY1|NIPLB_DANRE Nipped-B-like protein B OS=Danio rerio GN=nipblb PE=2 SV=1
Length = 2876
Score = 40.4 bits (93), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 73/132 (55%), Gaps = 14/132 (10%)
Query: 303 IRDKLAELQEERNKKHKDRCDDRRSKE----RSKDQDREPSRDREKEASRDRDRGDSRDR 358
++D++ E ++ R+K+ D +RSK+ R KDQD+E +DREK ++ ++G +D+
Sbjct: 735 VKDRVKEQEKVRDKEQVKGRDKKRSKDLEKCREKDQDKELEKDREKNQDKELEKGREKDQ 794
Query: 359 GRDYDRS-SRDRDRYYDRDRRYD--------RERDRDSDRHRSYDS-RSHRRSRSRSKER 408
++ ++ +DRD+ ++ R D RE+D+D + + + R R + R K R
Sbjct: 795 DKELEKGREKDRDKEMEKAREKDQDKELEKGREKDQDKELEKGQEKDRDKVREKDRDKVR 854
Query: 409 SRDYDRHRRHDR 420
+D D+ R DR
Sbjct: 855 DKDRDKVREKDR 866
Score = 39.7 bits (91), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 55/99 (55%), Gaps = 10/99 (10%)
Query: 328 KERSKDQDRE----PSRDREKEASRDRD--RGDSRDRGRDYDRS---SRDRDRYYDRDRR 378
K R KDQD+E +DR+K +DRD R RD+ R+ DR +DRD+ ++DR
Sbjct: 824 KGREKDQDKELEKGQEKDRDKVREKDRDKVRDKDRDKVREKDRDKVREKDRDKLREKDRE 883
Query: 379 YDRERDRDSDRHRSYDSRSHR-RSRSRSKERSRDYDRHR 416
RERDRD R + D + R + + KER +D D+ R
Sbjct: 884 KIRERDRDKGREKDRDKEQVKTREKDQEKERLKDRDKER 922
Score = 38.9 bits (89), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 55/108 (50%), Gaps = 19/108 (17%)
Query: 319 KDRCDDRRSKERSKDQDREPSRDREK------EASRDRDRGDSRDRGRDYDRSSRDRDRY 372
KDR D K R KDQD+E + REK E +++DR R++ RD R +DRD+
Sbjct: 804 KDR-DKEMEKAREKDQDKELEKGREKDQDKELEKGQEKDRDKVREKDRDKVR-DKDRDKV 861
Query: 373 YDRDRRYDRERDRDSDRHRSYDSRSHRRSRSRSKERSRDYDRHRRHDR 420
++DR RE+DRD R + R K R RD D+ R DR
Sbjct: 862 REKDRDKVREKDRDK-----------LREKDREKIRERDRDKGREKDR 898
Score = 32.3 bits (72), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 326 RSKERSKDQDREPSRDREKEASRDRDRGDSRDRGRDYDRSSRDRDRYYDRDRRYDRERDR 385
R K R KD+D+ +DREK RDRD+G +DR ++ + +R++D+ +R + D+ER++
Sbjct: 866 RDKVREKDRDKLREKDREKIRERDRDKGREKDRDKEQVK-TREKDQEKERLKDRDKEREK 924
>sp|Q5XIN3|MIPT3_RAT TRAF3-interacting protein 1 OS=Rattus norvegicus GN=Traf3ip1 PE=2
SV=1
Length = 653
Score = 39.3 bits (90), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 20/111 (18%)
Query: 326 RSKERSKDQDREPSRDREKEASRDRDRGDSRDRGRDYDRSSRDRDRYY------------ 373
R KER K++ +E RDR +E RDR+R R++ R + RDR+
Sbjct: 193 REKERDKEKAKEADRDRHREPDRDRNRDGEREKARARAKQDRDRNNKDRDRETERDRDRD 252
Query: 374 -------DRDRRYDRERDRDSDRHRSYDSRSHRRSRSRSKERSRDYDRHRR 417
+++R+ DR+RD+ DR R S++ +R +E+SRD D+ +
Sbjct: 253 RRSDGGKEKERQKDRDRDKGKDRER-RKSKNGEHTRDPDREKSRDADKSEK 302
>sp|Q6PGZ3|MIPT3_DANRE TRAF3-interacting protein 1 OS=Danio rerio GN=traf3ip1 PE=2 SV=1
Length = 629
Score = 39.3 bits (90), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 366 SRDRDRYYDRDRRYDRERDRDSDRHRSYDSRSHRRSRSRSKERSRDYDRHRRHDR 420
R+R+R DRDR D+ RDR+ D+ R + R + R+R KER RD DR ++ +R
Sbjct: 203 GRERERTKDRDRDKDKSRDREKDKTREKE-REREKDRNREKERERDKDRDKKKER 256
Score = 34.3 bits (77), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 44/67 (65%), Gaps = 9/67 (13%)
Query: 320 DRCDDRRSKERSKDQDREP--SRDREKEASRDRDRGDSRDRGRDYDRSSRDRDRYYDRDR 377
+R D R +ER+KD+DR+ SRDREK+ +R+++R +DR +R+++R D+DR
Sbjct: 198 ERSDKGRERERTKDRDRDKDKSRDREKDKTREKEREREKDR-------NREKERERDKDR 250
Query: 378 RYDRERD 384
+ER+
Sbjct: 251 DKKKERE 257
>sp|Q8RWV3|CCL11_ARATH Cyclin-L1-1 OS=Arabidopsis thaliana GN=CYCL1-1 PE=2 SV=2
Length = 416
Score = 37.4 bits (85), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 53/91 (58%), Gaps = 5/91 (5%)
Query: 327 SKERSKDQDREPSRDREKEASRDRDRGDSRDRGRDYDR-SSRDRDRYYDRDRRYDRERDR 385
S ERSK DRE DREKE R+RDRG S RGRD DR S R+RD+ DR R+R +
Sbjct: 328 SYERSKVGDRERESDREKERGRERDRGRSH-RGRDSDRDSDRERDKLKDRSHHRSRDRLK 386
Query: 386 DSDRHRSYDSRSHRRSRSR-SKERSRDYDRH 415
DS H D H SR R ++ S+D RH
Sbjct: 387 DSGGHS--DKSRHHSSRDRDYRDSSKDRRRH 415
>sp|Q9UDY2|ZO2_HUMAN Tight junction protein ZO-2 OS=Homo sapiens GN=TJP2 PE=1 SV=2
Length = 1190
Score = 37.4 bits (85), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Query: 346 ASRDRDRGDSRDRGRDYDRS-SRDRDRYYDRDRRYDRERDRDSDRHRSYDSRSHRRSRSR 404
R R DS +RGR ++R+ SR+RD DR R ER D D R+ D RSR R
Sbjct: 165 GGRSRSWEDSPERGRPHERARSRERDLSRDRSRGRSLERGLDQDHARTRD-----RSRGR 219
Query: 405 SKERSRDYD 413
S ER D+D
Sbjct: 220 SLERGLDHD 228
Score = 33.1 bits (74), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 327 SKERSKDQDREPSRDREKEASRDRDRGDSRDRGRDYDRSSRDRDRYYDRDRRYDRERDRD 386
S ER + +R +R RE++ SRDR RG S +RG D D +R RDR R R +R D D
Sbjct: 174 SPERGRPHER--ARSRERDLSRDRSRGRSLERGLDQDH-ARTRDR--SRGRSLERGLDHD 228
>sp|Q9AS36|CCL11_ORYSJ Cyclin-L1-1 OS=Oryza sativa subsp. japonica GN=CYCL1-1 PE=2 SV=1
Length = 427
Score = 33.5 bits (75), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 330 RSKDQDREPSRDREKEASRDRD-RGDSRDRGRDYDRSSRDRDRYY-DRDRRYDRERDRDS 387
+ +D DRE R+R++EA RDR R S+DR Y + R R DR Y RD
Sbjct: 364 KGRDSDRE--RERDREADRDRQRRHHSKDRSSGYSDKEKSRHRSSRDRGDHYSSHSSRDK 421
Query: 388 DRHR 391
DRHR
Sbjct: 422 DRHR 425
Score = 32.0 bits (71), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 32/64 (50%), Gaps = 16/64 (25%)
Query: 367 RDRDRYYDRDRRYDRERDRDSDRHRSYDSRS---------HRRSRSR----SKERSRDYD 413
RD DR +RDR DR+R R RH S D S HR SR R S SRD D
Sbjct: 366 RDSDRERERDREADRDRQR---RHHSKDRSSGYSDKEKSRHRSSRDRGDHYSSHSSRDKD 422
Query: 414 RHRR 417
RHRR
Sbjct: 423 RHRR 426
>sp|Q9VJ87|CWC22_DROME Pre-mRNA-splicing factor CWC22 homolog OS=Drosophila melanogaster
GN=ncm PE=1 SV=3
Length = 1330
Score = 33.5 bits (75), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 54/109 (49%), Gaps = 25/109 (22%)
Query: 335 DREPSRDREKEAS---RDRDRGDSR-DRGRDYDRSSRDRDRYYDRDRRYDRE-------- 382
D R+R +E S R+R+RG+S DR R SS DR+R +R+ YD+E
Sbjct: 1136 DNSTGRERNRENSSYDRERNRGNSSYDRERKRGNSSYDRER--NRESSYDKERKNRNAVA 1193
Query: 383 --RDRDSDRHRSYD---------SRSHRRSRSRSKERSRDYDRHRRHDR 420
R R DR RSY+ R R SRS++ SR DR R++R
Sbjct: 1194 HDRQRKRDRSRSYERPTIRENSAPREKRMESSRSEKDSRRGDRSSRNER 1242
>sp|Q8C9B9|DIDO1_MOUSE Death-inducer obliterator 1 OS=Mus musculus GN=Dido1 PE=1 SV=4
Length = 2256
Score = 32.3 bits (72), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 5/44 (11%)
Query: 373 YDRDRRYDRERDRDSDRHRSYDSRSHRRSRSRSKERSRDYDRHR 416
+ R+R D ER RD DRHR +D R RS +++R RD DR +
Sbjct: 2141 WSRER--DWERSRDWDRHREWD---KGRDRSSNRDRERDNDRAK 2179
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.134 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 158,160,328
Number of Sequences: 539616
Number of extensions: 7129856
Number of successful extensions: 91815
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 832
Number of HSP's successfully gapped in prelim test: 1259
Number of HSP's that attempted gapping in prelim test: 48728
Number of HSP's gapped (non-prelim): 16269
length of query: 421
length of database: 191,569,459
effective HSP length: 120
effective length of query: 301
effective length of database: 126,815,539
effective search space: 38171477239
effective search space used: 38171477239
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)