Query 014618
Match_columns 421
No_of_seqs 189 out of 1336
Neff 7.7
Searched_HMMs 46136
Date Fri Mar 29 06:53:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014618.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014618hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG2233 UraA Xanthine/uracil p 100.0 9E-63 2E-67 494.3 33.3 357 23-420 4-379 (451)
2 KOG1292 Xanthine/uracil transp 100.0 6.3E-62 1.4E-66 481.5 30.7 397 24-420 1-405 (510)
3 PRK11412 putative uracil/xanth 100.0 9.5E-59 2.1E-63 471.3 36.0 350 35-420 8-374 (433)
4 PRK10720 uracil transporter; P 100.0 1.6E-56 3.5E-61 457.5 34.8 342 23-419 2-360 (428)
5 TIGR03616 RutG pyrimidine util 100.0 7.2E-56 1.6E-60 452.5 36.9 355 22-419 17-380 (429)
6 PF00860 Xan_ur_permease: Perm 100.0 1.5E-57 3.3E-62 461.7 23.8 351 35-420 1-366 (389)
7 TIGR00801 ncs2 uracil-xanthine 100.0 6.3E-55 1.4E-59 445.3 35.1 347 31-419 1-367 (415)
8 TIGR03173 pbuX xanthine permea 100.0 3.4E-53 7.3E-58 432.3 33.3 337 41-420 1-352 (406)
9 COG2252 Xanthine/uracil/vitami 100.0 3.4E-38 7.3E-43 314.8 27.9 347 21-420 5-376 (436)
10 TIGR00843 benE benzoate transp 100.0 7.7E-27 1.7E-31 232.8 30.8 321 36-415 22-355 (395)
11 PF03594 BenE: Benzoate membra 100.0 1.2E-25 2.7E-30 220.4 29.5 320 36-414 6-338 (378)
12 COG0659 SUL1 Sulfate permease 99.9 2.2E-25 4.7E-30 233.8 27.9 315 34-417 21-367 (554)
13 COG3135 BenE Uncharacterized p 99.9 3.2E-23 7E-28 199.0 27.5 319 36-414 21-353 (402)
14 PRK11660 putative transporter; 99.9 1.8E-21 3.9E-26 206.6 27.9 317 33-400 28-388 (568)
15 TIGR00815 sulP high affinity s 99.9 8.4E-21 1.8E-25 201.4 27.3 319 34-400 14-368 (563)
16 PF00916 Sulfate_transp: Sulfa 99.7 9.7E-17 2.1E-21 155.9 8.7 232 150-417 1-266 (280)
17 KOG0236 Sulfate/bicarbonate/ox 99.6 4.3E-13 9.4E-18 144.2 25.2 320 35-400 81-436 (665)
18 TIGR00834 ae anion exchange pr 98.7 2.2E-05 4.7E-10 86.4 28.6 315 72-414 401-797 (900)
19 KOG1172 Na+-independent Cl/HCO 98.4 0.00015 3.2E-09 78.4 24.6 357 28-414 343-773 (876)
20 PF11840 DUF3360: Protein of u 97.7 0.0064 1.4E-07 60.2 19.9 304 63-417 87-417 (492)
21 PF00955 HCO3_cotransp: HCO3- 97.2 0.00025 5.5E-09 74.1 3.2 184 216-415 277-479 (510)
22 TIGR00815 sulP high affinity s 82.7 18 0.00039 38.9 12.6 115 288-413 19-149 (563)
23 COG0659 SUL1 Sulfate permease 76.0 20 0.00043 38.5 10.2 114 287-412 25-149 (554)
24 PF13792 Sulfate_tra_GLY: Sulf 68.1 5.9 0.00013 31.3 3.1 58 33-103 15-74 (84)
25 PRK11660 putative transporter; 67.1 67 0.0014 34.6 11.9 116 287-413 33-155 (568)
26 PF05977 MFS_3: Transmembrane 62.9 76 0.0016 33.8 11.2 129 29-172 215-345 (524)
27 TIGR03173 pbuX xanthine permea 61.1 70 0.0015 32.7 10.4 75 74-171 255-329 (406)
28 PF03594 BenE: Benzoate membra 57.1 79 0.0017 32.1 9.5 127 281-414 2-139 (378)
29 PRK11412 putative uracil/xanth 55.8 71 0.0015 33.2 9.3 76 73-171 276-351 (433)
30 TIGR00843 benE benzoate transp 48.3 1.1E+02 0.0023 31.5 9.0 115 284-398 21-142 (395)
31 TIGR00801 ncs2 uracil-xanthine 48.0 62 0.0013 33.3 7.4 76 74-172 271-346 (415)
32 PHA03255 BDLF3; Provisional 45.3 34 0.00074 30.5 4.2 38 5-46 159-196 (234)
33 PRK05122 major facilitator sup 33.6 2.5E+02 0.0055 27.7 9.2 70 30-99 13-86 (399)
34 PF01914 MarC: MarC family int 30.9 4.3E+02 0.0092 24.3 12.1 29 156-184 164-199 (203)
35 KOG4085 Uncharacterized conser 28.0 1.4E+02 0.0031 26.0 5.1 46 358-407 28-73 (175)
36 PRK03699 putative transporter; 26.0 2.3E+02 0.0049 28.2 7.4 38 54-91 227-264 (394)
37 COG2233 UraA Xanthine/uracil p 23.5 2.2E+02 0.0047 29.9 6.5 32 140-171 325-356 (451)
38 PF15110 TMEM141: TMEM141 prot 22.8 1.3E+02 0.0029 24.2 3.7 23 216-238 53-75 (94)
39 PRK10133 L-fucose transporter; 22.1 4.2E+02 0.0091 27.1 8.6 48 53-101 47-98 (438)
40 PRK11663 regulatory protein Uh 21.7 3.4E+02 0.0073 27.5 7.8 38 53-91 44-81 (434)
41 PF00916 Sulfate_transp: Sulfa 21.7 3.1E+02 0.0068 26.0 7.1 81 75-180 182-262 (280)
42 PRK15034 nitrate/nitrite trans 20.9 9.8E+02 0.021 25.0 11.6 97 62-171 64-164 (462)
43 TIGR01299 synapt_SV2 synaptic 20.0 9.5E+02 0.021 26.9 11.2 44 55-99 190-237 (742)
No 1
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=100.00 E-value=9e-63 Score=494.30 Aligned_cols=357 Identities=28% Similarity=0.483 Sum_probs=329.4
Q ss_pred CcccccCCCCChHHHHHHHHHHHHHHhcceehhhhHhhhhcCCChHHHHHHHHHHHHHHHHHHHHHHH----hCCCccee
Q 014618 23 SISYCITSPPPWPEAILLGFQHYIVMLGTTVLIPTSLVPQMGGGNEEKAKVIQTLLFVAGLNTLLQSL----FGTRLPAV 98 (421)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~Glq~~l~m~~~~v~~p~il~~a~gl~~~~~~~~i~a~~~~~gi~tllq~~----~G~rlPiv 98 (421)
+.....|||+|++|.+++|+||+++|+.+.+++|++++++.+++++|+.++++++++.||++|++|.+ +|.|+|.+
T Consensus 4 ~~~~~~~~~~~~~~~~~lglQH~lamfg~~V~VPlivg~a~~l~~~~~~~Lis~~l~~~GiaTllq~~~~~~~g~~lP~~ 83 (451)
T COG2233 4 LIYVLVDERLPLGKLLLLGLQHLLAMFGATVLVPLLVGLALGLSAEDTAYLISADLLASGIGTLLQLLGTGPGGSGLPSY 83 (451)
T ss_pred cccCcccccCChHHHHHHHHHHHHHHHhcchHhhHHhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCcccCCCee
Confidence 34556788889999999999999999999999999999999999999999999999999999999997 46699999
Q ss_pred eecccchHHHHHHHHHhcccCCCCCCChhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhh-hhhhccCccchHHHHHHHHh
Q 014618 99 MGGSYTFVPSTISIILAGRFSNYSGDPVEKFKRTMRAIQGSLIVASTLQIVLGFSGLWR-NVTRFLSPLSVVPLISLVGF 177 (421)
Q Consensus 99 ~gps~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ga~lv~Gll~~llg~~gl~~-~l~~~iPp~V~g~~l~~IGl 177 (421)
+|+||+++.+++++.++++ .+.+.++|+++++|+++++++.. ++ |++|+|||.|+|.+++.||+
T Consensus 84 lG~sFafi~p~i~~~~~~g-------------~~~~~~~G~ii~ag~~~~li~~~--~~~~l~rlfPPvVtG~Vi~~IGl 148 (451)
T COG2233 84 LGSSFAFVAPMIAIGGTTG-------------DGIAALLGGIIAAGLVYFLISPI--VKIRLARLFPPVVTGPVVLVIGL 148 (451)
T ss_pred EechHHHHHHHHHHHhccC-------------CchHHHHHHHHHHHHHHHHHHHH--HHHHHHHhCCCceEEeEeeeehh
Confidence 9999999999988876543 25899999999999999999976 46 99999999999999999999
Q ss_pred HhhhhhcCCccc--------------hhhchHHHHHHHHHHHHHhhhhhhccccchhhHHHHHHHHHHHHHHHHHhhcCC
Q 014618 178 GLYEFGFPGVAK--------------CVEIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGA 243 (421)
Q Consensus 178 ~l~~~~~~~~~~--------------~~~v~~~~l~~~~~l~~~~~~~~~~~~~~~~~~aiLigiv~g~~~a~~~g~~~~ 243 (421)
+|.+.+++++.+ +..+++.+++++++++++.|+ ++|+.++|+|+++||++++.+|.
T Consensus 149 sL~~vai~~~~G~~~~~~~~~~~~~~~l~la~~tl~~il~~~~f~~g-------~~~~i~ILiGlv~G~~la~~~G~--- 218 (451)
T COG2233 149 SLAPVAINMAGGGPGAAGNPDFGSLENLGLALVTLLIILLINRFGKG-------FLRRIPILIGLVVGYLLALFMGM--- 218 (451)
T ss_pred hhHHHHHHHhhCCCCCCCCcccCchhHHHHHHHHHHHHHHHHHHhhh-------HHHHHHHHHHHHHHHHHHHHhCC---
Confidence 999998865431 456888888888888888766 58899999999999999999984
Q ss_pred CCCCCcccccccccCccCcCCCCCceecCCCCCcCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCccCC
Q 014618 244 YNDAAPKTQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLS 323 (421)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~P~~~~~~~p~f~~~~i~~~~~~~lv~~~es~g~~~a~~~~~~~~~~~~~~~~ 323 (421)
+|++. +.++||+++|.+++|++ +|||.+++.+++++++.+.|++|++.+.++.++++..++++++
T Consensus 219 -------------vdf~~-v~~a~w~~~P~~~~fg~-~F~~~ail~m~~v~iV~~~E~~G~i~A~~~itg~~~~~~~~l~ 283 (451)
T COG2233 219 -------------VDFSG-VAEAPWFALPTPFYFGM-AFDWGAILTMLPVAIVTIVEHTGDITATGEITGRDLDGKPRLR 283 (451)
T ss_pred -------------cCccc-cccCceeeCCcccCCCe-eecHHHHHHHHHHHHHHHHHHhhhhhhHHhHhCCcCccCcccc
Confidence 47776 78999999999999998 9999999999999999999999999999999998766679999
Q ss_pred cceehhhhHHHHhhhcCCCCCCcccccchhhhhhccCCchhHHHHHHHHHHHHHhhhHHHHHHhhCChHHHHHHHHHHHH
Q 014618 324 RGVGWQGVGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFA 403 (421)
Q Consensus 324 r~l~~~Gl~~i~sgl~G~~~~t~~~~~n~g~i~~tg~~sr~~~~~a~~~ll~l~~~p~~~~l~~~IP~avlggvll~~~g 403 (421)
|++++||++++++|+||++|.|+|+ ||+|+++.||+.||++...+++++++++++||+++++++||.||+||+.+++||
T Consensus 284 rg~~aDGlat~iag~fg~~p~Ttfa-qNiGvv~lT~v~Sr~V~~~aavili~lgl~pk~~al~~sIP~pVlGGa~ivmFG 362 (451)
T COG2233 284 RGLLADGLATLIAGLFGGFPNTTFA-QNIGVVALTGVYSRYVIAGAAVILILLGLFPKFGALIQSIPSPVLGGAMLVLFG 362 (451)
T ss_pred cceeeccHHHHHHHhcCCCCCCchh-hceeeeeeccCChhHHHHHHHHHHHHHHhhHHHHHHHHhCChhhhhHHHHHHHH
Confidence 9999999999999999999999999 999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhHhcCCCC
Q 014618 404 YVLEVLASFSSVTSTVS 420 (421)
Q Consensus 404 ~i~~~gi~~i~~~d~~~ 420 (421)
++..+|+|++...|+|.
T Consensus 363 ~Ia~sGir~l~~~~~~~ 379 (451)
T COG2233 363 MIAASGIRILIRNKVDR 379 (451)
T ss_pred HHHHHHHHHHHhccccc
Confidence 99999999999999876
No 2
>KOG1292 consensus Xanthine/uracil transporters [Nucleotide transport and metabolism]
Probab=100.00 E-value=6.3e-62 Score=481.46 Aligned_cols=397 Identities=57% Similarity=1.037 Sum_probs=369.7
Q ss_pred cccccCCCCChHHHHHHHHHHHHHHhcceehhhhHhhhhcCCChHHH-HHHHHHHHHHHHHHHHHHHHhCCCcceeeecc
Q 014618 24 ISYCITSPPPWPEAILLGFQHYIVMLGTTVLIPTSLVPQMGGGNEEK-AKVIQTLLFVAGLNTLLQSLFGTRLPAVMGGS 102 (421)
Q Consensus 24 ~~~~~~~~~~~~~~~~~Glq~~l~m~~~~v~~p~il~~a~gl~~~~~-~~~i~a~~~~~gi~tllq~~~G~rlPiv~gps 102 (421)
..|+++|+|||...+++|+||++.|.+.++++|.+++.+++.+++|. +.+|+++++++|+.|++|++||.|+|+++|+|
T Consensus 1 l~y~i~d~P~w~~~i~lgfQhyl~~lg~~v~iP~~lv~~m~~g~~~~~~~lIsT~~f~sGI~TllQt~fG~RLp~v~G~S 80 (510)
T KOG1292|consen 1 LHYCINDNPPWPEIILLGFQHYLVCLGTTVLIPFLLVPLMCGGDEEKAVQLISTIFFVSGITTLLQTTFGTRLPLVQGPS 80 (510)
T ss_pred CccCCCCCCCchHHHHhccchHHHHhhhhhhhhhhhcccccCChHHHHHHHHHHHhhhccHHHHHHHHhhcccccccccc
Confidence 36999999999999999999999999999999999999999999988 99999999999999999999999999999999
Q ss_pred cchHHHHHHHHHhcccCCCCC---CChhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCccchHHHHHHHHhHh
Q 014618 103 YTFVPSTISIILAGRFSNYSG---DPVEKFKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFLSPLSVVPLISLVGFGL 179 (421)
Q Consensus 103 ~~~~~~~~~i~~~~~~~~~~~---~~~~~~~~~~~~~~ga~lv~Gll~~llg~~gl~~~l~~~iPp~V~g~~l~~IGl~l 179 (421)
++|+++..++.....+.+... .+++.|...++++.|+.++++.+++++|++|+.+++.|++.|..+...+.++|+++
T Consensus 81 fafl~p~~~i~~~~~~~~~~~~~~~~~~~~~~~mr~iqGAlivas~vqiilG~sGl~g~l~rfi~Plti~P~v~lvgl~l 160 (510)
T KOG1292|consen 81 FAFLPPALAIISLPRFTCITTPHETDTERFQHRMREIQGALIVASLVQIILGFSGLWGNLLRFIGPLTIVPLVALVGLGL 160 (510)
T ss_pred eehhhHHHHHHhccccCCCCCcccchhHHHHHHHHHhcchHHHHHHHHHHHhhhhhHHHHHhhcCChhhhhHHHHHhhhh
Confidence 999999999987655555321 12457999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcCCccchhhchHHHHHHHHHHHHH--hhhhhh--ccccchhhHHHHHHHHHHHHHHHHHhhcCCCCCCCccccccc
Q 014618 180 YEFGFPGVAKCVEIGLPQLVIIVFISQY--LPHVIK--RGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASC 255 (421)
Q Consensus 180 ~~~~~~~~~~~~~v~~~~l~~~~~l~~~--~~~~~~--~~~~~~~~~aiLigiv~g~~~a~~~g~~~~~~~~~~~~~~~~ 255 (421)
+..+.+..+.+|.++++.+++.+++++| .+|... +.++.++++++++++.+.|++|+++...|.|++++.+++..+
T Consensus 161 ~~~~~~~~~~~weI~l~~~llli~fsqy~~~~~~~~~~~~~~if~~f~vll~i~ivW~~~~iLT~tgay~~~~~~t~~~~ 240 (510)
T KOG1292|consen 161 FQDGFPKLGKHWEISLPEILLLILFSQYASLPKKGFGSRRIQIFSRFPVLLAIAIVWLYCFILTITGAYPYKPTTTQSSC 240 (510)
T ss_pred HHhhhhhhhhheeecHHHHHHHHHHHHhhhcccccccccccchHhhccHHHHHHHHHHHHHHHHhccccCCCccccCCcc
Confidence 9999999999999999999999999999 533322 235578999999999999999999999999999888889999
Q ss_pred ccCccCcCCCCCceecCCCCCcCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCccCCcceehhhhHHHH
Q 014618 256 RTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILL 335 (421)
Q Consensus 256 ~~~~~~~i~~~~~~~~P~~~~~~~p~f~~~~i~~~~~~~lv~~~es~g~~~a~~~~~~~~~~~~~~~~r~l~~~Gl~~i~ 335 (421)
|+|-+..+.++||+.+|+|++||.|+||++....++...++.++|++|++.+++|.++++.+.++.+||++..||+++++
T Consensus 241 RTD~~~vi~~apWi~vPyP~QwG~P~f~~~~~f~m~aa~~va~iES~G~y~a~ar~~~a~ppP~~~inRgi~~eGig~lL 320 (510)
T KOG1292|consen 241 RTDRNGVISSAPWIRVPYPFQWGPPTFSAGLVFAMMAASLVAMIESTGDYIACARLSSATPPPPSVLNRGIGWEGIGSLL 320 (510)
T ss_pred cccHhhhhccCCceeecCCCccCCCcccHHHHHHHHHHHHHHHHHhcchHHHHHHHhcCCCCChhhhhhhhhhhhHHHHH
Confidence 99988778889999999999999999999999999999999999999999999999988777778899999999999999
Q ss_pred hhhcCCCCCCcccccchhhhhhccCCchhHHHHHHHHHHHHHhhhHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhHh
Q 014618 336 SGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVLEVLASFSSV 415 (421)
Q Consensus 336 sgl~G~~~~t~~~~~n~g~i~~tg~~sr~~~~~a~~~ll~l~~~p~~~~l~~~IP~avlggvll~~~g~i~~~gi~~i~~ 415 (421)
+|++|+-.+++.+.||+|+++.||++||++..++|.++++++++.||++++++||.|++|+++++.++++...|++++++
T Consensus 321 ~gl~G~gtG~Tt~~ENigll~vTKVgSRrvvQ~aa~fmI~~~i~gKFgA~fAsIP~piv~~l~c~~~~mv~avgLSnLQf 400 (510)
T KOG1292|consen 321 AGLFGTGTGSTTSVENIGLLGVTKVGSRRVVQIAAGFMIFFGIFGKFGAFFASIPDPIVGGLLCILFGMVGAVGLSNLQF 400 (510)
T ss_pred HHhhCCCccceeeccceeeEeeeeeeeeeehhhhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHhhhhhee
Confidence 99999988888777999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCC
Q 014618 416 TSTVS 420 (421)
Q Consensus 416 ~d~~~ 420 (421)
.|++|
T Consensus 401 ~dlns 405 (510)
T KOG1292|consen 401 VDLNS 405 (510)
T ss_pred ecccc
Confidence 99987
No 3
>PRK11412 putative uracil/xanthine transporter; Provisional
Probab=100.00 E-value=9.5e-59 Score=471.25 Aligned_cols=350 Identities=17% Similarity=0.318 Sum_probs=301.8
Q ss_pred HHHHHHHHHHHHHHhcceehhhhHhhhhcCCChHHHHHHHHHHHHHHHHHHHHHHHhCCCcceeeecccchHHHHHHHHH
Q 014618 35 PEAILLGFQHYIVMLGTTVLIPTSLVPQMGGGNEEKAKVIQTLLFVAGLNTLLQSLFGTRLPAVMGGSYTFVPSTISIIL 114 (421)
Q Consensus 35 ~~~~~~Glq~~l~m~~~~v~~p~il~~a~gl~~~~~~~~i~a~~~~~gi~tllq~~~G~rlPiv~gps~~~~~~~~~i~~ 114 (421)
++.+.+|+||+++|+.+++++|++++++.|+|++|+.+++|+++++||++|++|+++|+|||+++|+|++++++++++..
T Consensus 8 ~~~~~lglQhvl~m~~~~i~vPliva~a~gl~~~~~~~li~~~l~~sGIaTllQ~~~G~rlPiv~G~Sf~~~~~~~~i~~ 87 (433)
T PRK11412 8 RESLLSGFQWFFFIFCNTVVVPPTLLSAFQLPQSSLLTLTQYAFLATALACFAQAFCGHRRAIMEGPGGLWWGTILTITL 87 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeeeCCchHHHHHHHHHHh
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999998888753
Q ss_pred hcccCCCCCCChhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCccchHHHHHHHHhHhhhhhcCCccc-----
Q 014618 115 AGRFSNYSGDPVEKFKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFLSPLSVVPLISLVGFGLYEFGFPGVAK----- 189 (421)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~ga~lv~Gll~~llg~~gl~~~l~~~iPp~V~g~~l~~IGl~l~~~~~~~~~~----- 189 (421)
.....+ ..+...++...++.+++|++++++|++++++|++|+|||.|+|.++++||+++.+.+++++.+
T Consensus 88 ~~~~~g------~~~~~~~g~l~g~~i~~g~~~~~lg~~~~~~~l~r~fpPvV~G~vv~lIGlsL~~~a~~~~~G~~~~~ 161 (433)
T PRK11412 88 GEASRG------TPINDIATSLAVGIALSGVVTILIGFSGLGHRLARLFTPMVMVVFMLLLGAQLTTIFFKGMLGLPFGI 161 (433)
T ss_pred cccccC------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhhhHhHHHHHHhhHHHHHHHhcCCCccC
Confidence 111000 001123444555799999999999999999999999999999999999999999988764311
Q ss_pred ----------hhhchHHHHHHHHHHHHHhhhhhhccccchhhHHHHHHHHHHHHHHH-HHhhcCCCCCCCcccccccccC
Q 014618 190 ----------CVEIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAH-LLTVGGAYNDAAPKTQASCRTD 258 (421)
Q Consensus 190 ----------~~~v~~~~l~~~~~l~~~~~~~~~~~~~~~~~~aiLigiv~g~~~a~-~~g~~~~~~~~~~~~~~~~~~~ 258 (421)
++.+++.++.+++.++++.|+ ++|++++++|+++||+++. .++. |
T Consensus 162 ~~~~~~~~~~~~~~a~~~l~~il~~~~~~~g-------~~~~~svLiGiv~G~v~a~~~~g~-----------------d 217 (433)
T PRK11412 162 ADPNGKIQLPPFGLSVAVMCLVLAMIIFLPQ-------RIARYSLLVGTIVGWILWAFCFPS-----------------S 217 (433)
T ss_pred cccccccchHHHHHHHHHHHHHHHHHHHhhh-------HHHHHHHHHHHHHHHHHHHHHhCC-----------------C
Confidence 233555566666666666554 5889999999999999864 4432 3
Q ss_pred ccCcCCCCCceecCCCCCcCCCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCccCCcceehhhhHHHHhh
Q 014618 259 RAGLIDAAPWIRVPWPFQWGAPS-FDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILLSG 337 (421)
Q Consensus 259 ~~~~i~~~~~~~~P~~~~~~~p~-f~~~~i~~~~~~~lv~~~es~g~~~a~~~~~~~~~~~~~~~~r~l~~~Gl~~i~sg 337 (421)
++. +.+++|. +++|+.|. |||.+++.+++.+++.+.|++|++.++++..+++..+++++||++.+||++|+++|
T Consensus 218 ~~~-v~~a~w~----~~pfG~P~~F~~~~il~~~~~~lv~~~e~iG~~~a~~~~~~~~~~~~~~l~rgi~~dGi~s~lag 292 (433)
T PRK11412 218 HSL-SGELHWQ----WFPLGSGGALEPGIILTAVITGLVNISNTYGAIRGTDVFYPQQGAGNTRYRRSFVATGFMTLITV 292 (433)
T ss_pred cch-hccCCce----eecCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcccccchhhccHHHHHHH
Confidence 443 4677884 34588895 99999999999999999999999999999988665447899999999999999999
Q ss_pred hcCCCCCCcccccchhhhhhccCCchhHHHHHHHHHHHHHhhhHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhHhcC
Q 014618 338 LFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVLEVLASFSSVTS 417 (421)
Q Consensus 338 l~G~~~~t~~~~~n~g~i~~tg~~sr~~~~~a~~~ll~l~~~p~~~~l~~~IP~avlggvll~~~g~i~~~gi~~i~~~d 417 (421)
+||+.|+|+|+ ||+|+++.||++||++..++++++++++|+||++++++.||.||+||+++++|+++..+|+|+++..|
T Consensus 293 lfg~~p~tt~s-qNvGvi~~TgV~SR~v~~~aa~ilillgl~PK~~alia~IP~pVlGg~~~~~Fg~I~~~Gi~~l~~~~ 371 (433)
T PRK11412 293 PLAVIPFSPFV-SSIGLLTQTGDYRRRSFIYGSVMCLLVALIPALTRLFCSIPLPVSSAVMLVSYLPLLGSALVFSQQIT 371 (433)
T ss_pred hcCCCCCCchh-hhhhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999999 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCC
Q 014618 418 TVS 420 (421)
Q Consensus 418 ~~~ 420 (421)
+++
T Consensus 372 ~~~ 374 (433)
T PRK11412 372 FTA 374 (433)
T ss_pred CCc
Confidence 875
No 4
>PRK10720 uracil transporter; Provisional
Probab=100.00 E-value=1.6e-56 Score=457.51 Aligned_cols=342 Identities=22% Similarity=0.367 Sum_probs=299.9
Q ss_pred CcccccCCCCChHHHHHHHHHHHHHHhcceehhhhHhhhhcCCChHHHHHHHHHHHHHHHHHHHHHHHhC-CCcceeeec
Q 014618 23 SISYCITSPPPWPEAILLGFQHYIVMLGTTVLIPTSLVPQMGGGNEEKAKVIQTLLFVAGLNTLLQSLFG-TRLPAVMGG 101 (421)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~Glq~~l~m~~~~v~~p~il~~a~gl~~~~~~~~i~a~~~~~gi~tllq~~~G-~rlPiv~gp 101 (421)
+..|++|||||+++.+++|+||+++|+.+++++|+++ |+|+++ ++++||++|++|++.+ .|+|+++|+
T Consensus 2 ~~~~~~~~~~p~~~~~~lglQhvl~m~~~~i~~Pli~----gl~~~~-------~l~~sGi~TliQ~~~~g~rlP~~~G~ 70 (428)
T PRK10720 2 RRAIGVSERPPLLQTIPLSLQHLFAMFGATVLVPILF----HINPAT-------VLLFNGIGTLLYLFICKGKIPAYLGS 70 (428)
T ss_pred CcccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhc----CCCHHH-------HHHHHHHHHHHHHHhccCccceEEeC
Confidence 5679999999999999999999999999999999985 788753 7899999999999764 699999999
Q ss_pred ccchHHHHHHHHHhcccCCCCCCChhhhhhhHHHHHHHHHHHHHHHHHHHhh--hh-hhhhhhccCccchHHHHHHHHhH
Q 014618 102 SYTFVPSTISIILAGRFSNYSGDPVEKFKRTMRAIQGSLIVASTLQIVLGFS--GL-WRNVTRFLSPLSVVPLISLVGFG 178 (421)
Q Consensus 102 s~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ga~lv~Gll~~llg~~--gl-~~~l~~~iPp~V~g~~l~~IGl~ 178 (421)
||++++++..+.. ++|++++|+++++|+++++++++ |+ ++|++|+|||.|+|.+++.||++
T Consensus 71 sfa~i~~~~~~~~----------------~~~~~~lgav~v~Glv~ills~~~~~~g~~~l~~~fPp~v~G~~i~lIGl~ 134 (428)
T PRK10720 71 SFAFISPVLLLLP----------------LGYEVALGGFIMCGVLFCLVALIVKKAGTGWLDVLFPPAAMGAIVAVIGLE 134 (428)
T ss_pred cHHHHHHHHHHHH----------------ccHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChHHHHHHHHHHHHH
Confidence 9999988766542 26999999999999999999997 22 67999999999999999999999
Q ss_pred hhhhhcCCcc-----------chhhchHHHHHHHHHHHHHhhhhhhccccchhhHHHHHHHHHHHHHHHHHhhcCCCCCC
Q 014618 179 LYEFGFPGVA-----------KCVEIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDA 247 (421)
Q Consensus 179 l~~~~~~~~~-----------~~~~v~~~~l~~~~~l~~~~~~~~~~~~~~~~~~aiLigiv~g~~~a~~~g~~~~~~~~ 247 (421)
+.+.++++.+ .++.+++.+++++++++++.|+ ++|++++++|+++||++++.+|..
T Consensus 135 L~~~~~~~~g~~~~~~~~~~~~~~~lalv~l~iil~~~~~~kg-------~~~~~~iLigIvvG~ila~~lG~~------ 201 (428)
T PRK10720 135 LAGVAAGMAGLLPAEGQTPDSKTIIISMVTLAVTVLGSVLFRG-------FLAIIPILIGVLVGYALSFAMGMV------ 201 (428)
T ss_pred hHHHHHhhccccCCCCcccchHHHHHHHHHHHHHHHHHHHhcc-------HHHHhHHHHHHHHHHHHHHHhcCC------
Confidence 9988775432 1356777777777666656554 478999999999999999998752
Q ss_pred CcccccccccCccCcCCCCCceecCCCCCcCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCccCCccee
Q 014618 248 APKTQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVG 327 (421)
Q Consensus 248 ~~~~~~~~~~~~~~~i~~~~~~~~P~~~~~~~p~f~~~~i~~~~~~~lv~~~es~g~~~a~~~~~~~~~~~~~~~~r~l~ 327 (421)
|++. +.+++|+++|. |+.|+||+..+..+++.+++.++|++|++.++++..+++..++++.||++.
T Consensus 202 ----------d~~~-v~~a~~~~lP~---~~~P~fd~~~il~l~~~~lv~~~EsiG~~~a~~~~~~~~~~~~~~~~r~l~ 267 (428)
T PRK10720 202 ----------DTTP-IIEAHWFALPT---FYTPRFEWFAILTILPAALVVIAEHVGHLVVTANIVKKDLLRDPGLHRSMF 267 (428)
T ss_pred ----------CHHH-hhcCccccCCC---CCCCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCccccchHh
Confidence 4443 56688999884 567899999999999999999999999999999988765434678999999
Q ss_pred hhhhHHHHhhhcCCCCCCcccccchhhhhhccCCchhHHHHHHHHHHHHHhhhHHHHHHhhCChHHHHHHHHHHHHHHHH
Q 014618 328 WQGVGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVLE 407 (421)
Q Consensus 328 ~~Gl~~i~sgl~G~~~~t~~~~~n~g~i~~tg~~sr~~~~~a~~~ll~l~~~p~~~~l~~~IP~avlggvll~~~g~i~~ 407 (421)
+||++|+++|+||++|.|+|+ ||.|.++.||++||++..++++++++++|+||++++++.||.||+||+.+++||++..
T Consensus 268 adGlatii~glfG~~p~tty~-en~g~ia~T~v~sr~v~~~a~~~li~lg~~pk~~a~ia~iP~pVlgg~~i~~fg~i~~ 346 (428)
T PRK10720 268 ANGLSTVISGFFGSTPNTTYG-ENIGVMAITRVYSTWVIGGAAIIAILLSCVGKLAAAIQAIPLPVMGGVSLLLYGVIGA 346 (428)
T ss_pred hhhHHHHHHHhcCCCCccccc-cccceeeecccchhHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999 9999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHh--HhcCCC
Q 014618 408 VLASFS--SVTSTV 419 (421)
Q Consensus 408 ~gi~~i--~~~d~~ 419 (421)
+|+|.+ +..|++
T Consensus 347 ~Gi~~l~~~~~~~~ 360 (428)
T PRK10720 347 SGIRVLIESKVDYN 360 (428)
T ss_pred HHHHHHHHccCCCC
Confidence 999999 666665
No 5
>TIGR03616 RutG pyrimidine utilization transport protein G. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the uracil-xanthine permease family defined by TIGR00801. As well as the The Nucleobase:Cation Symporter-2 (NCS2) Family (TC 2.A.40).
Probab=100.00 E-value=7.2e-56 Score=452.54 Aligned_cols=355 Identities=22% Similarity=0.367 Sum_probs=302.4
Q ss_pred CCcccccCCCCChHHHHHHHHHHHHHHhcceehhhhHhhhhcCCChHHHHHHHHHHHHHHHHHHHHHH-HhCCCcceeee
Q 014618 22 PSISYCITSPPPWPEAILLGFQHYIVMLGTTVLIPTSLVPQMGGGNEEKAKVIQTLLFVAGLNTLLQS-LFGTRLPAVMG 100 (421)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~Glq~~l~m~~~~v~~p~il~~a~gl~~~~~~~~i~a~~~~~gi~tllq~-~~G~rlPiv~g 100 (421)
++..|++|||||+++++++|+||+++|+++++++|+++ |+|++ ++++++|++|++|+ .+|+|+|+++|
T Consensus 17 ~~~~~~~d~~~p~~~~~~~GlQh~lam~~~~v~~Plil----gl~~~-------~tl~~sGi~TllQ~~~~G~rlP~v~G 85 (429)
T TIGR03616 17 EHHPVAPDERLPAAQTIVMGLQHAVAMFGATVLMPLLM----GFDPN-------LTILMSGIGTLLFFLITGGRVPSYLG 85 (429)
T ss_pred cCcccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHh----CCCHh-------HHHHHHHHHHHHHHHHhCCCceeEEc
Confidence 44779999999999999999999999999999999996 67875 67999999999997 47999999999
Q ss_pred cccchHHHHHHHHHhcccCCCCCCChhhhhhhHHHHHHHHHHHHHHHHHHHhhhhh---hhhhhccCccchHHHHHHHHh
Q 014618 101 GSYTFVPSTISIILAGRFSNYSGDPVEKFKRTMRAIQGSLIVASTLQIVLGFSGLW---RNVTRFLSPLSVVPLISLVGF 177 (421)
Q Consensus 101 ps~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ga~lv~Gll~~llg~~gl~---~~l~~~iPp~V~g~~l~~IGl 177 (421)
+|++|+.++..+..... . ++ ...+++++|+++++|++++++++++.+ ++++|+|||.|+|.++++||+
T Consensus 86 ~sf~f~~~~~~~~~~~~-~----~~----~~~~~~a~ga~iv~G~i~~llg~~~~~~~~~~l~r~fpPvV~G~vv~lIGl 156 (429)
T TIGR03616 86 SSAAFVGAVIAATGYNG-Q----GT----NPNIALALGGIIACGLVYAAIGLVVMRTGTRWIERLMPPVVTGAVVMAIGL 156 (429)
T ss_pred CcHHHHHHHHHHHhhcc-c----CC----cchHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCcHHHHHHHHHHHH
Confidence 99999997765432111 0 01 135889999999999999999998765 899999999999999999999
Q ss_pred HhhhhhcCCccc---hhhchHHHHHHHHHHHHHhhhhhhccccchhhHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccc
Q 014618 178 GLYEFGFPGVAK---CVEIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQAS 254 (421)
Q Consensus 178 ~l~~~~~~~~~~---~~~v~~~~l~~~~~l~~~~~~~~~~~~~~~~~~aiLigiv~g~~~a~~~g~~~~~~~~~~~~~~~ 254 (421)
++.+.++++..+ ....++.+++.++++.++.|+ .+|++++|+|+++||++++.++.. ++..
T Consensus 157 sL~~vg~~~~~~~~~~~~~al~tl~~i~l~~l~~~~-------~l~~~avLiGivvG~iva~~l~~~--~g~~------- 220 (429)
T TIGR03616 157 NLAPIAVKSVSASGFDSWMAVLTILCIGAVAVFTRG-------MLQRLLILVGLIAAYLAYFILTNV--FGLG------- 220 (429)
T ss_pred HHHHHHHHhccccccccHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHhhh--cCCC-------
Confidence 999998876542 112466666666666667665 478999999999999999876421 1100
Q ss_pred cccCccCcCCCCCceecCCCCCcCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCccCCcceehhhhHHH
Q 014618 255 CRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGIL 334 (421)
Q Consensus 255 ~~~~~~~~i~~~~~~~~P~~~~~~~p~f~~~~i~~~~~~~lv~~~es~g~~~a~~~~~~~~~~~~~~~~r~l~~~Gl~~i 334 (421)
++.|++. +.+++|+++| +|+.|+||++.+..+++.+++.++|++|++.++++..+++ .++++||++.+||++|+
T Consensus 221 ~~vd~s~-v~~a~~~~lP---~~~~p~f~~~~il~~~~~~lv~~~esiG~~~a~~~~~~~~--~~~~i~r~l~adGl~t~ 294 (429)
T TIGR03616 221 KAVDFSP-ISQAAWFGLP---NFHTPVFNANAMLLIAPVALILVAENLGHFKAVAGMTGRN--LDPYMGRAFVGDGLATM 294 (429)
T ss_pred ccccCcc-cccCccccCC---cCCCceEcHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCCC--CCchhccchhhhhHHHH
Confidence 1246664 6778999999 5678899999999999999999999999999999988754 34479999999999999
Q ss_pred HhhhcCCCCCCcccccchhhhhhccCCchhHHHHHHHHHHHHHhhhHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHh-
Q 014618 335 LSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVLEVLASFS- 413 (421)
Q Consensus 335 ~sgl~G~~~~t~~~~~n~g~i~~tg~~sr~~~~~a~~~ll~l~~~p~~~~l~~~IP~avlggvll~~~g~i~~~gi~~i- 413 (421)
++|++|+.|.|+|+ ||+|.++.||++||++...+++++++++++||++++++.||.||+||+++++||++..+|+|++
T Consensus 295 ~agl~g~~p~tt~~-en~g~i~~T~v~SR~v~~~a~~~lillgl~Pk~~al~~~IP~pVlgG~~i~~fg~i~~~Gi~~l~ 373 (429)
T TIGR03616 295 LSGSVGGTGVTTYA-ENIGVMAVTKVYSTLVFVAAAVFAILLGFSPKFGALIHTIPVAVLGGASIVVFGLIAVAGARIWV 373 (429)
T ss_pred HHHhcCCCCCccee-eeeeeeeecCcchHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999 9999999999999999999999999999999999999999999999999999999999999988
Q ss_pred -HhcCCC
Q 014618 414 -SVTSTV 419 (421)
Q Consensus 414 -~~~d~~ 419 (421)
+..|++
T Consensus 374 ~~~~d~~ 380 (429)
T TIGR03616 374 QNKVDLT 380 (429)
T ss_pred hccCCcC
Confidence 565665
No 6
>PF00860 Xan_ur_permease: Permease family; InterPro: IPR006043 This entry represents a susbset of the wider APC (Amino acid-Polyamine-organoCation) superfamily of transporters []. Characterised proteins in this entry include: Xanthine permease PbuX, involved in cellualar xanthine transport [] Uric acid permeases which promotes uptake of uric acid into the cell in limiting-nitrogen conditions [] Uracil permease [] Sodium-dependent vitamin C transporter, a sodium/ascorbate cotransporter mediating electrogenic uptake of Vitamin C [] These proteins generally contain 12 transmembrane regions. Many members of this family are uncharacterised and may transport other substrates eg. RutG is likely to transport pyrimidines into the cell [].; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016020 membrane; PDB: 3QE7_A.
Probab=100.00 E-value=1.5e-57 Score=461.66 Aligned_cols=351 Identities=32% Similarity=0.565 Sum_probs=263.4
Q ss_pred HHHHHHHHHHHHHHhcceehhhhHhhhhcCCChHHHHHHHHHHHHHHHHHHHHHHH-hCCCcceeeecccchHHHHHHHH
Q 014618 35 PEAILLGFQHYIVMLGTTVLIPTSLVPQMGGGNEEKAKVIQTLLFVAGLNTLLQSL-FGTRLPAVMGGSYTFVPSTISII 113 (421)
Q Consensus 35 ~~~~~~Glq~~l~m~~~~v~~p~il~~a~gl~~~~~~~~i~a~~~~~gi~tllq~~-~G~rlPiv~gps~~~~~~~~~i~ 113 (421)
+||+++|+||+++|+++++++|.+++++.|+ ++|+..+++++++++|++|++|++ +|+|+|+++|+|+.++......
T Consensus 1 ~~~i~~glQ~~l~m~~~~iv~P~il~~~~g~-~~~~~~li~at~l~sgi~Tllq~~~~g~~lpl~~G~s~~~~~~~~~~- 78 (389)
T PF00860_consen 1 GKEILLGLQHFLAMFYIIIVVPLILAAAFGL-DADTAALISATFLVSGIATLLQGLPAGHRLPLVPGPSFAFIFAFMIV- 78 (389)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHTTTS------------HHHHHHHHHHHHHHHHHHTTT-----EEE-GGGHHHHHGG-
T ss_pred CccHHHHHHHHHHHHHHHHHhHHHHhhcccc-cchhhHHHHHHHHHHHHHHHHHHhcCCCceecccccchhhhhhhhcc-
Confidence 5899999999999999999999999998898 777789999999999999999999 8999999999999888732211
Q ss_pred HhcccCCCCCCChhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCccchHHHHHHHHhHhhhhhcCCccch---
Q 014618 114 LAGRFSNYSGDPVEKFKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFLSPLSVVPLISLVGFGLYEFGFPGVAKC--- 190 (421)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~ga~lv~Gll~~llg~~gl~~~l~~~iPp~V~g~~l~~IGl~l~~~~~~~~~~~--- 190 (421)
..+ .+.+.++|++++|+++++|+++++++++++++|++|+|||.|.|.++++||+++.+.++++....
T Consensus 79 ~g~---------~~~~~~~~~~~~g~~~i~gi~~~~l~~~g~~~~l~~~~pp~v~g~v~~~IGl~L~~~~~~~~~~~~~~ 149 (389)
T PF00860_consen 79 IGM---------AESGGYGLQAALGAVLISGILFILLGLTGLRKRLRRLFPPVVKGAVVLLIGLSLAPIGLKNAGGIWGN 149 (389)
T ss_dssp G--------------HHHHHHHHHHHHHHHHHHHHHHHTT-SH-HHHHH--HHHHHHHHHHHHHHHHHHHHHHTTSS---
T ss_pred ccc---------ccchhhchhhhhhHHHHHHHHHHHHHHhchHHHHHHHhChhheEeeEeeehhhhhhhHhhcccccccc
Confidence 110 02235799999999999999999999999999999999999999999999999999887654321
Q ss_pred -----------hhchHHHHHHHHHHHHHhhhhhhccccchhhHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccccccCc
Q 014618 191 -----------VEIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDR 259 (421)
Q Consensus 191 -----------~~v~~~~l~~~~~l~~~~~~~~~~~~~~~~~~aiLigiv~g~~~a~~~g~~~~~~~~~~~~~~~~~~~~ 259 (421)
..++..+++..+.++++. ++++|++++++|+++||++++++|.. |+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~ailigi~~g~i~~~~~g~~----------------~~ 206 (389)
T PF00860_consen 150 PDGLLVGDGKNLGLAVLTLLFILLLSLFL-------KGFLRKGAILIGIIAGWIVAAILGVV----------------DF 206 (389)
T ss_dssp BTT-B---HHHHHHHHHHHHHHHHHHHSS-------STTTTTHHHHHHHHHHHHHHHHHHHT----------------TS
T ss_pred ccccccccccccccccccchhhhhhhhhh-------hhhcccccchhhhhhhhhhhhccccc----------------cc
Confidence 233444444444444443 45688999999999999999999863 33
Q ss_pred cCcCCCCCceecCCCCCcCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCccCCcceehhhhHHHHhhhc
Q 014618 260 AGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILLSGLF 339 (421)
Q Consensus 260 ~~~i~~~~~~~~P~~~~~~~p~f~~~~i~~~~~~~lv~~~es~g~~~a~~~~~~~~~~~~~~~~r~l~~~Gl~~i~sgl~ 339 (421)
++.+.++||+.+|.+++|++|+|++..++.++.+++++++|++|++.++++..++++++++++||++.+||++|+++|++
T Consensus 207 ~~~~~~~~~~~~p~~~~~g~p~f~~~~i~~~~~~~lv~~~es~G~~~a~~~~~~~~~~~~~~~~r~l~~dg~~~~l~gl~ 286 (389)
T PF00860_consen 207 SPSVSSAPWFSLPSPFPFGWPSFDPGAILTFLIFALVAMFESIGTIVAVARIAGKDDPRPPRIRRGLLADGLGTILAGLF 286 (389)
T ss_dssp SH-HHHS-SS--------------HHHHHHHTHHHHHHHHHHHHHHHHHHHHHTS-TCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred CcccccccccccccccccccccccHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCCccchhhcccceeeeeeeeechhh
Confidence 32245689999999999999999999999999999999999999999999999977666889999999999999999999
Q ss_pred CCCCCCcccccchhhhhhccCCchhHHHHHHHHHHHHHhhhHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhHhcCCC
Q 014618 340 GTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVLEVLASFSSVTSTV 419 (421)
Q Consensus 340 G~~~~t~~~~~n~g~i~~tg~~sr~~~~~a~~~ll~l~~~p~~~~l~~~IP~avlggvll~~~g~i~~~gi~~i~~~d~~ 419 (421)
|++|+|+|+ ||+|.++.||++||+++..+++++++++++||++++++.||.+|+++++++++|.++++|+|+++|+|++
T Consensus 287 G~~~~t~~~-en~g~i~~t~v~Sr~~~~~a~~~~i~~~~~p~~~~l~~~IP~~v~gg~~lv~~g~i~~~gi~~i~~~~~~ 365 (389)
T PF00860_consen 287 GTSPTTTYS-ENAGGIAATGVASRRVGLTAGVILILFGLSPKFAPLFASIPSPVIGGPLLVLFGMIMMSGIRNIDWVDLD 365 (389)
T ss_dssp T---EEE-H-HHHHHHHHHTB--HHHHHHHHHHHHHHT--HHHHHHHTTS-HHHHHHHHHHHHHHHHHHHHHHHHHTTS-
T ss_pred cCCCCcccc-ccchhhhhhccccceeeeHHHHHHHHHhhHHHHHHHHHHHHHHHhccchHHHHHHHHHHHhHhheecccC
Confidence 999999999 9999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred C
Q 014618 420 S 420 (421)
Q Consensus 420 ~ 420 (421)
+
T Consensus 366 ~ 366 (389)
T PF00860_consen 366 S 366 (389)
T ss_dssp S
T ss_pred c
Confidence 4
No 7
>TIGR00801 ncs2 uracil-xanthine permease. NCS2 family appears to be distantly related to the NCS1 family (TC #2.A.39).
Probab=100.00 E-value=6.3e-55 Score=445.25 Aligned_cols=347 Identities=27% Similarity=0.463 Sum_probs=309.1
Q ss_pred CCChHHHHHHHHHHHHHHhcceehhhhHhhhhcCCChHHHHHHHHHHHHHHHHHHHHHHHhCC---CcceeeecccchHH
Q 014618 31 PPPWPEAILLGFQHYIVMLGTTVLIPTSLVPQMGGGNEEKAKVIQTLLFVAGLNTLLQSLFGT---RLPAVMGGSYTFVP 107 (421)
Q Consensus 31 ~~~~~~~~~~Glq~~l~m~~~~v~~p~il~~a~gl~~~~~~~~i~a~~~~~gi~tllq~~~G~---rlPiv~gps~~~~~ 107 (421)
|||+++.+.+|+||+++|+.+++++|++++++. +|++|+..+++++++++|++|++|+++.+ |+|.++|++|++++
T Consensus 1 ~~~~~~~~~lglQh~l~~~~~~i~~p~iv~~~~-l~~~~~~~li~at~~~sgi~Tllq~~~~~~~~~lp~~~G~sfa~i~ 79 (415)
T TIGR00801 1 RPPFLQTLVLGLQHLLAMFGGTVLVPLLVGLAP-LSAEQTQYLVSISLLTSGIGTLLQLFRTGGQIGLPSYLGSSFAFVS 79 (415)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-CCHHHHHHHHHHHHHHHHHHHHHHHhhhcCceeeeeeecCcHHHHH
Confidence 688999999999999999999999999999998 99999999999999999999999997543 36999999999998
Q ss_pred HHHHHHHhcccCCCCCCChhhhhhhHHHHHHHHHHHHHHHHHHHhh--h-hhhhhhhccCccchHHHHHHHHhHhhhhhc
Q 014618 108 STISIILAGRFSNYSGDPVEKFKRTMRAIQGSLIVASTLQIVLGFS--G-LWRNVTRFLSPLSVVPLISLVGFGLYEFGF 184 (421)
Q Consensus 108 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ga~lv~Gll~~llg~~--g-l~~~l~~~iPp~V~g~~l~~IGl~l~~~~~ 184 (421)
+...+..+ ++|++++|+++++|+++++++++ | .++|++|+|||.|.|.++++||+++.+.++
T Consensus 80 ~~~~~~~~---------------~~~~~~~g~~i~~gl~~~ll~~~~~~~~~~~i~~~~Pp~v~g~iv~~IGl~L~~i~l 144 (415)
T TIGR00801 80 PMIAIGSG---------------LGIPAIMGALIATGLVYTLLSLLIKKLGPRWLMKLFPPVVTGPVVMLIGLSLIPVAV 144 (415)
T ss_pred HHHHHHhc---------------cCHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhcCCchhHHHhHHHHHHHHHHHHH
Confidence 87655422 37899999999999999999985 3 468899999999999999999999999887
Q ss_pred CCcc--------------chhhchHHHHHHHHHHHHHhhhhhhccccchhhHHHHHHHHHHHHHHHHHhhcCCCCCCCcc
Q 014618 185 PGVA--------------KCVEIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPK 250 (421)
Q Consensus 185 ~~~~--------------~~~~v~~~~l~~~~~l~~~~~~~~~~~~~~~~~~aiLigiv~g~~~a~~~g~~~~~~~~~~~ 250 (421)
++.. .++.+++.++++++++.++.|+ ++|++++++++++||++++.+|..
T Consensus 145 ~~~~g~~~~~~~~~~~~~~~~~vg~~~l~~~vl~~~~~~g-------~~~~~aiLigiv~g~i~a~~lg~~--------- 208 (415)
T TIGR00801 145 KMAAGGEAAMSSATYGSLENLGVAFVVLALIILLNRFGKG-------FLKSISILIGILVGYILALFMGIV--------- 208 (415)
T ss_pred HHhccCCCcccccccCchhhHHHHHHHHHHHHHHHHHHhh-------HHHHHHHHHHHHHHHHHHHHcCCc---------
Confidence 6542 1245777777777677666655 478999999999999999988752
Q ss_pred cccccccCccCcCCCCCceecCCCCCcCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCccCCcceehhh
Q 014618 251 TQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQG 330 (421)
Q Consensus 251 ~~~~~~~~~~~~i~~~~~~~~P~~~~~~~p~f~~~~i~~~~~~~lv~~~es~g~~~a~~~~~~~~~~~~~~~~r~l~~~G 330 (421)
|+++ +.+.||+++|.+++|+ |+||++.+..++++++++++|++++.+++++.++++++++++.||++.+||
T Consensus 209 -------~~~~-v~~~~~~~lP~~~~~g-~~f~~~~~~~~~~i~lv~~~es~g~~~a~a~~~g~~~~~~~~~~r~l~adG 279 (415)
T TIGR00801 209 -------DFSP-VIDAPWFSLPTPFTFG-PSFEWPAILTMLPVAIVSLVESIGDITATADVSGRDLSGDPRLHRGVLADG 279 (415)
T ss_pred -------cchh-hccCcccccCCccCCC-ceecHHHHHHHHHHHHHHHHHhhhHHHHHHHHhCCCCCCCccccchHHHhh
Confidence 4443 5668999999877777 689999999999999999999999999999999875544678999999999
Q ss_pred hHHHHhhhcCCCCCCcccccchhhhhhccCCchhHHHHHHHHHHHHHhhhHHHHHHhhCChHHHHHHHHHHHHHHHHHHH
Q 014618 331 VGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVLEVLA 410 (421)
Q Consensus 331 l~~i~sgl~G~~~~t~~~~~n~g~i~~tg~~sr~~~~~a~~~ll~l~~~p~~~~l~~~IP~avlggvll~~~g~i~~~gi 410 (421)
++|+++|++|++|.|+|+ ||+|.++.||++||++..++++++++++++||++++++.+|.+|+|++++++++.+..+|+
T Consensus 280 l~~i~aglfG~~p~t~~s-en~g~~~~T~~~sr~~~~~~a~~~i~~~l~pk~~~l~~~iP~~vlgg~~l~~~~~i~~~gi 358 (415)
T TIGR00801 280 LATLLAGLFGGFPNTTFA-QNIGVIALTRVASRWVIVGAAVILIALGFFPKIAALITSIPSPVLGGASIVMFGMIAASGI 358 (415)
T ss_pred HHHHHHHhcCCCCCcchh-hhheeeeecCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhHhcCCC
Q 014618 411 SFSSVTSTV 419 (421)
Q Consensus 411 ~~i~~~d~~ 419 (421)
|.+..+|+|
T Consensus 359 ~~l~~~~~~ 367 (415)
T TIGR00801 359 RILIRNKLD 367 (415)
T ss_pred HHHHhCccC
Confidence 999999988
No 8
>TIGR03173 pbuX xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696, ) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.
Probab=100.00 E-value=3.4e-53 Score=432.26 Aligned_cols=337 Identities=32% Similarity=0.511 Sum_probs=298.9
Q ss_pred HHHHHHHHhcceehhhhHhhhhcCCChHHHHHHHHHHHHHHHHHHHHHH----HhCCCcceeeecccchHHHHHHHHHhc
Q 014618 41 GFQHYIVMLGTTVLIPTSLVPQMGGGNEEKAKVIQTLLFVAGLNTLLQS----LFGTRLPAVMGGSYTFVPSTISIILAG 116 (421)
Q Consensus 41 Glq~~l~m~~~~v~~p~il~~a~gl~~~~~~~~i~a~~~~~gi~tllq~----~~G~rlPiv~gps~~~~~~~~~i~~~~ 116 (421)
|+||+++|+.+.+++|++++++.|+|++|+..+++++++++|++|++|+ .+|+|+|+++|||++++.++....++
T Consensus 1 ~~Qh~l~~~~~~i~~p~i~~~a~gl~~~~~~~~i~at~l~sgi~tllq~~~~~~~G~~~P~~~g~s~a~~~~~~~~~~~- 79 (406)
T TIGR03173 1 GLQHVLAMYAGAVAVPLIVGGALGLSAEQTAYLISADLFACGIATLIQTLGIGPFGIRLPVVQGVSFAAVGPMIAIGAG- 79 (406)
T ss_pred CccchHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhccccccCCccceeecCcHHHHHHHHHHhhh-
Confidence 6899999999999999999999999999999999999999999999997 46899999999999998876655422
Q ss_pred ccCCCCCCChhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCccchHHHHHHHHhHhhhhhcCCcc--------
Q 014618 117 RFSNYSGDPVEKFKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFLSPLSVVPLISLVGFGLYEFGFPGVA-------- 188 (421)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~ga~lv~Gll~~llg~~gl~~~l~~~iPp~V~g~~l~~IGl~l~~~~~~~~~-------- 188 (421)
++|++++|+++++|++++++| ++++|++|+|||.++|.+++.||+++.+.++++..
T Consensus 80 --------------~~~~~~~ga~~v~Gii~illg--~~~~~l~~~iPp~v~G~~i~~IGl~l~~~~~~~~~g~~~~~~~ 143 (406)
T TIGR03173 80 --------------GGLGAIFGAVIVAGLFVILLA--PFFSKLVRFFPPVVTGTVITLIGLSLMPVAINWAAGGAGAPDF 143 (406)
T ss_pred --------------hhHHHHHHHHHHHHHHHHHHH--HHHHHHHHHCCcHHHHHHHHHHHHHHHHHHHHHhccCCCcccc
Confidence 479999999999999999999 46799999999999999999999999988775432
Q ss_pred ---chhhchHHHHHHHHHHHHHhhhhhhccccchhhHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccccccCccCcCCC
Q 014618 189 ---KCVEIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDA 265 (421)
Q Consensus 189 ---~~~~v~~~~l~~~~~l~~~~~~~~~~~~~~~~~~aiLigiv~g~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~ 265 (421)
+++.+++.++++++++.++.|+ ++|++++++++++||++++.+|.. |+++ +.+
T Consensus 144 ~~~~~~~l~l~~l~~~il~~~~~~~-------~~~~~aiLi~ivvg~iva~~~g~~----------------~~~~-i~~ 199 (406)
T TIGR03173 144 GSPQNLGLALLTLVIILLLNRFGKG-------FLRSIAVLLGLVVGTIVAAALGMV----------------DFSG-VAE 199 (406)
T ss_pred cchHHHHHHHHHHHHHHHHHHHhhh-------HHHHhHHHHHHHHHHHHHHHhcCC----------------Cchh-hcc
Confidence 1345777777766665555444 478899999999999999988752 4433 556
Q ss_pred CCceecCCCCCcCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCccCCcceehhhhHHHHhhhcCCCCCC
Q 014618 266 APWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILLSGLFGTVNGT 345 (421)
Q Consensus 266 ~~~~~~P~~~~~~~p~f~~~~i~~~~~~~lv~~~es~g~~~a~~~~~~~~~~~~~~~~r~l~~~Gl~~i~sgl~G~~~~t 345 (421)
.+|+.+|.+++|++|+||+..+..++.+++++++|++++.+++++..+++. ++++.||++.+||++|+++|+||++|.|
T Consensus 200 ~~~~~~P~~~~~~~P~f~~~~~~~~~~~~lv~~~esig~~~a~~~~~g~~~-~~~~~~~~l~~~Gi~~i~aglfG~~p~t 278 (406)
T TIGR03173 200 APWFALPTPFHFGAPTFDLVAILTMIIVYLVSMVETTGDFLALGEITGRPI-TEKDLAGGLRADGLGSALGGLFNTFPYT 278 (406)
T ss_pred CCeeeCCCCCcCCCCeeCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC-CchhccchHHhccHHHHHHHHhCCCCCc
Confidence 789999988788999999999999889999999999999999999987543 5678999999999999999999999999
Q ss_pred cccccchhhhhhccCCchhHHHHHHHHHHHHHhhhHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhHhcCCCC
Q 014618 346 SVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVLEVLASFSSVTSTVS 420 (421)
Q Consensus 346 ~~~~~n~g~i~~tg~~sr~~~~~a~~~ll~l~~~p~~~~l~~~IP~avlggvll~~~g~i~~~gi~~i~~~d~~~ 420 (421)
+|+ ||++.++.||++||++.+++++++++++++||++++++.+|.+|+|++++++++++..+|+|.++..|+++
T Consensus 279 ~~~-~~~~~~~~tg~~sr~~~~~~~~~lil~~l~~~~~~l~~~iP~~vlgg~~l~~~~~i~~~g~~~l~~~~~~~ 352 (406)
T TIGR03173 279 SFS-QNVGLVQLTGVKSRYVVAAAGVILVLLGLFPKLAALVASIPQPVLGGAGLVMFGMVAASGIRILSKVDFDR 352 (406)
T ss_pred chh-hhHHHHHHhCCCchHhHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHhCcccC
Confidence 999 99999999999999999999999999999999999999999999999999999999999999999888875
No 9
>COG2252 Xanthine/uracil/vitamin C permease [Nucleotide transport and metabolism]
Probab=100.00 E-value=3.4e-38 Score=314.81 Aligned_cols=347 Identities=15% Similarity=0.186 Sum_probs=271.2
Q ss_pred CCCcccccCCCCC-hHHHHHHHHHHHHHHhcceehhhhHhhhhcCCChHHHHHHHHHHHHHHHHHHHHHHHhCCCcceee
Q 014618 21 LPSISYCITSPPP-WPEAILLGFQHYIVMLGTTVLIPTSLVPQMGGGNEEKAKVIQTLLFVAGLNTLLQSLFGTRLPAVM 99 (421)
Q Consensus 21 ~~~~~~~~~~~~~-~~~~~~~Glq~~l~m~~~~v~~p~il~~a~gl~~~~~~~~i~a~~~~~gi~tllq~~~G~rlPiv~ 99 (421)
..|++|+++||.+ +|+|+++|+++|++|.|.+.+||.+++++ |+|. ..++.+|++.++++|++|+++ +|+|+.+
T Consensus 5 ~~~~~F~l~~~~t~vrtEiiAGlTTFltM~YIl~VnP~IL~~a-g~~~---~av~~AT~l~a~~gs~~mgl~-An~P~al 79 (436)
T COG2252 5 DLDRFFKLKEHGTTVRTEVIAGLTTFLTMAYIVFVNPQILGAA-GMPV---GAVFVATCLAAAIGSIAMGLY-ANLPIAL 79 (436)
T ss_pred HHHHHhCccccCchHHHHHHHHHHHHHHHHHhheecHHHHHhc-CCCc---hhHHHHHHHHHHHHHHHHHHH-HcCchhh
Confidence 4578999999998 99999999999999999999999999985 7874 578899999999999999998 8999999
Q ss_pred ecc---cchHHHHHHHHHhcccCCCCCCChhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCccc-------hH
Q 014618 100 GGS---YTFVPSTISIILAGRFSNYSGDPVEKFKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFLSPLS-------VV 169 (421)
Q Consensus 100 gps---~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ga~lv~Gll~~llg~~gl~~~l~~~iPp~V-------~g 169 (421)
+|. .+|... +++..++ .+||+++++++++|+++++++++|+|+|++|.+|... +|
T Consensus 80 apgmglnAfFaf--tvv~~~g-------------i~wq~AL~aVF~sGiif~ils~t~iR~~ii~~IP~~lk~ai~aGIG 144 (436)
T COG2252 80 APGMGLNAFFAF--TVVLGMG-------------LSWQVALGAVFLSGIIFLLLSLTGIREWIINAIPRSLKLAIGAGIG 144 (436)
T ss_pred cchhhHHHHHHH--HHHHhcC-------------CcHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHH
Confidence 995 344443 3344443 4799999999999999999999999999999999865 45
Q ss_pred HHHHHHHhHhhhhhcCC---------ccc-hhhchHHHHHHHHHHHHHhhhhhhccccchhhHHHHHHHHHHHHHHHHHh
Q 014618 170 PLISLVGFGLYEFGFPG---------VAK-CVEIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLT 239 (421)
Q Consensus 170 ~~l~~IGl~l~~~~~~~---------~~~-~~~v~~~~l~~~~~l~~~~~~~~~~~~~~~~~~aiLigiv~g~~~a~~~g 239 (421)
.+++.||+......+.+ +.+ ...+++.++++++++ ..||+ +.+++++++..+++++++|
T Consensus 145 lFia~IgL~~~Givv~~~~tlv~LG~~~~p~vll~i~G~~l~~~L--~~~~i---------~Gaili~i~~~t~~g~~~g 213 (436)
T COG2252 145 LFIALIGLKNAGIVVANPATLVALGDFTSPGVLLAILGLLLIIVL--VSRKI---------KGAILIGILVTTILGIILG 213 (436)
T ss_pred HHHHHHHHhhCCeEEecCcceEEeecCCCchHHHHHHHHHHHHHH--HHhhc---------cHhhhHHHHHHHHHHHHhc
Confidence 55666666543332211 111 245667777776665 55654 7899999999999999988
Q ss_pred hcCCCCCCCcccccccccCccCcCCCCCceecCCCCCcCCC--cccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCC-
Q 014618 240 VGGAYNDAAPKTQASCRTDRAGLIDAAPWIRVPWPFQWGAP--SFDAGEAFAMMMASFVALVESTGAFFAVARYASATP- 316 (421)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~P~~~~~~~p--~f~~~~i~~~~~~~lv~~~es~g~~~a~~~~~~~~~- 316 (421)
.... +.+.....|.. .|...+.+.. ...+..+..++.+.+++++|++|++.+++++.+..+
T Consensus 214 ~~~~---------------~~~~~~~~p~~-~~~~~~~d~~~~~~~~~~~~~if~f~~~~~FD~~GTl~gv~~~ag~~~~ 277 (436)
T COG2252 214 IDVH---------------FGGLVGAPPSL-SPIFGQLDLSGNLSLAAFAPVIFTFFFVDLFDTLGTLIGVASKAGLLDK 277 (436)
T ss_pred cccc---------------ccccccCCCCc-cchhhHhhhccchhhHHHHHHHHHHHHHHHhcchHHHHHHHHhcCCcCC
Confidence 5210 00000111100 0111111211 122455567788999999999999999999987533
Q ss_pred -CCCccCCcceehhhhHHHHhhhcCCCCCCcccccchhhhhhccCCchhHHHHHHHHHHHHHhhhHHHHHHhhCChHHHH
Q 014618 317 -MPPSVLSRGVGWQGVGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVA 395 (421)
Q Consensus 317 -~~~~~~~r~l~~~Gl~~i~sgl~G~~~~t~~~~~n~g~i~~tg~~sr~~~~~a~~~ll~l~~~p~~~~l~~~IP~avlg 395 (421)
++.+|.+|.+.+|++++++++++|+++.|+|. ||.+.++..|+++..+.+++.++++.+.+.| +...+|..+.+
T Consensus 278 ~g~~~~~~~al~~D~v~t~~ga~~GtS~~t~yI-ESaaGva~GgrTGltavv~g~lFl~~lf~~P----l~~~vP~~Ata 352 (436)
T COG2252 278 NGKMPRIGKALLADSVATVVGALFGTSTVTAYI-ESAAGVAAGGRTGLTAVVTGLLFLLSLFFSP----LAALVPGYATA 352 (436)
T ss_pred CCCccccchHHHHhHHHHHHHHhcCCcchhhhh-hcccccccccccccHHHHHHHHHHHHHHHHH----HHHhCcHhhhh
Confidence 33579999999999999999999999999999 9999999999999888888888888876667 99999999999
Q ss_pred HHHHHHHHHHHHHHHHHhHhcCCCC
Q 014618 396 ALYCLFFAYVLEVLASFSSVTSTVS 420 (421)
Q Consensus 396 gvll~~~g~i~~~gi~~i~~~d~~~ 420 (421)
++|++ +|.+|+++++.+||+|++.
T Consensus 353 paLi~-vG~lM~~~v~~id~~d~~e 376 (436)
T COG2252 353 PALII-VGALMLSSVKQIDWSDFTE 376 (436)
T ss_pred HHHHH-HHHHHHhhhccCCchhhhh
Confidence 99985 8999999999999999853
No 10
>TIGR00843 benE benzoate transporter. The benzoate transporter family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter.
Probab=99.96 E-value=7.7e-27 Score=232.83 Aligned_cols=321 Identities=14% Similarity=0.196 Sum_probs=239.9
Q ss_pred HHHHHHHHHHHHHhcceehhhhHhhhhcCCChHHHHHHHHHHHHHHHHHHHHHHHhCCCcceeeecccchHHHHHHHHHh
Q 014618 36 EAILLGFQHYIVMLGTTVLIPTSLVPQMGGGNEEKAKVIQTLLFVAGLNTLLQSLFGTRLPAVMGGSYTFVPSTISIILA 115 (421)
Q Consensus 36 ~~~~~Glq~~l~m~~~~v~~p~il~~a~gl~~~~~~~~i~a~~~~~gi~tllq~~~G~rlPiv~gps~~~~~~~~~i~~~ 115 (421)
..+.+|+..+++-+.+.+++-+..+++.|++++|..+|+++.++.+|++|++|+++ +|+|++++||. ...++.+...
T Consensus 22 s~~~aG~va~lvg~~~~~~iv~~a~~~~g~s~aq~~swl~a~~~~~Gl~ti~lS~~-~r~Pi~~awSt--PGaAll~~~~ 98 (395)
T TIGR00843 22 PTLIAGFLAVLIGYAGPAAIFFQAAIKAGASTAMIIGWITAIGIAAAVSGIFLSIR-FKTPVLTAWSA--PGAALLVTGF 98 (395)
T ss_pred HHHHHHHHHHHHhccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCeeeecCc--hHHHHHHHhc
Confidence 57889999999999999888888888899999999999999999999999999986 89999999993 2222222221
Q ss_pred cccCCCCCCChhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCccchHHHHHHHHhHhhhhhcCCccchhhchH
Q 014618 116 GRFSNYSGDPVEKFKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFLSPLSVVPLISLVGFGLYEFGFPGVAKCVEIGL 195 (421)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~ga~lv~Gll~~llg~~gl~~~l~~~iPp~V~g~~l~~IGl~l~~~~~~~~~~~~~v~~ 195 (421)
.+ .+++++.|+.+++|++.+++|++|+++|++|++|+.+.+.+++.+.+...-..++...+.+.++.
T Consensus 99 ~~-------------~~~~eavGAfiv~g~lilllGltG~f~rl~~~IP~~Va~amLAGIlL~f~l~~~~a~~~~pll~~ 165 (395)
T TIGR00843 99 PG-------------ISLNEAIAAFITAAALIFLCGITGLFAKLLKIIPHGIAAAMLAGILFQFGLGAFAALDGLFLICF 165 (395)
T ss_pred CC-------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 11 47999999999999999999999999999999999999999988877664444444444555554
Q ss_pred HHHHHHHHHHHHhhhhhhccccchhhHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccccccCccCcCCCCCceecCCCC
Q 014618 196 PQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDAAPWIRVPWPF 275 (421)
Q Consensus 196 ~~l~~~~~l~~~~~~~~~~~~~~~~~~aiLigiv~g~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~P~~~ 275 (421)
+.++..+ ..|| +.+++++++++++|+++++..|.. |.++ . .+ +++.|
T Consensus 166 ~mll~~l----~~~r-------~~Pr~avl~aLlvG~iva~~~G~~----------------~~~~-~---~~-~l~~p- 212 (395)
T TIGR00843 166 SMLLCWL----ASKA-------FAPRYAMIAALICGIAFSFALGDM----------------NPTD-L---DF-KIALP- 212 (395)
T ss_pred HHHHHHH----HHHH-------hcchHHHHHHHHHHHHHHHHhcCC----------------Cccc-c---cc-ccccc-
Confidence 3333222 2232 356799999999999999887642 1111 1 11 12222
Q ss_pred CcCCCcccHHHHHHH-HHHHHHHHHHHHHHHHHHHhhhCCCCCCCccCCcceehhhhHHHHhhhcCCCCCCcccccchhh
Q 014618 276 QWGAPSFDAGEAFAM-MMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILLSGLFGTVNGTSVSVENAGL 354 (421)
Q Consensus 276 ~~~~p~f~~~~i~~~-~~~~lv~~~es~g~~~a~~~~~~~~~~~~~~~~r~l~~~Gl~~i~sgl~G~~~~t~~~~~n~g~ 354 (421)
.|..|+||+...+.. ++.+++.+......-.++.|..+++ .+.|+.+..+|++|++++.||+++. |.+.
T Consensus 213 ~~~~P~fs~~a~~~l~lPl~~vtm~~qnlpgiavl~aaGy~----~p~~~~~~~tGl~sll~ApfGg~~~------nlaa 282 (395)
T TIGR00843 213 QFIAPDFSFAHSLNLALPLFLVSLAGQFAPGIAALKAAGYN----APAKPIIAAAGLAALFAAFAGGISI------GIAA 282 (395)
T ss_pred eeeCCCCCHHHHHHHHHHHHHHHHHhcCchHHHHHHHcCCC----CCchHHHHHHHHHHHHHhccCCchh------hhhH
Confidence 566789998887765 5788888876554445666776653 4579999999999999999999872 3222
Q ss_pred hhh---------ccCCchhH-HHHHHHHHHHHHhh-hHHHHHHhhCChHHHHHH-HHHHHHHHHHHHHHHhHh
Q 014618 355 LAL---------TRVGSRRV-VQISAGFMIFFSVL-GKFGAVFASIPAPIVAAL-YCLFFAYVLEVLASFSSV 415 (421)
Q Consensus 355 i~~---------tg~~sr~~-~~~a~~~ll~l~~~-p~~~~l~~~IP~avlggv-ll~~~g~i~~~gi~~i~~ 415 (421)
+.. .....|+. .+.+|+++++++++ +.+..++..+|.+.+..+ .+.+++.+..+=-+-++.
T Consensus 283 itaAic~G~~ah~d~~rR~~a~i~~Gv~yll~glfag~i~~l~~~~P~~li~~laGlAll~~~~~~l~~a~~~ 355 (395)
T TIGR00843 283 ITAAICMGKDAHEDKDKRWIAAAAAGIFYLLAGLFAGAITALFAALPKELIAALAGLALLGAIAGNIKIALHE 355 (395)
T ss_pred HhHHHhcCcccccCcCccchHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 221 12233443 68899999999999 788999999999988887 677888887765555533
No 11
>PF03594 BenE: Benzoate membrane transport protein; InterPro: IPR004711 The benzoate:H+ symporter (BenE) family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter [, ]. Proteins in this family are about 400 residues in length and probably span the membrane 12 times. They exhibit about 30% identity to each other and limited sequence similarity to members of the aromatic acid:H+symporter (AAHS) family of the major facilitator superfamily (MFS). However the degree of similarity with the latter proteins is insufficient to establish homology. Thus, in spite of the sequence similarity and their similar substrate specificities, the BenE family must be considered separately. This family is classified as TC number 2.A.46 under the transporter classification (TC) system [].; GO: 0016021 integral to membrane
Probab=99.95 E-value=1.2e-25 Score=220.41 Aligned_cols=320 Identities=20% Similarity=0.249 Sum_probs=246.7
Q ss_pred HHHHHHHHHHHHHhcceehhhhHhhhhcCCChHHHHHHHHHHHHHHHHHHHHHHHhCCCcceeeecccchHHHHHHHHHh
Q 014618 36 EAILLGFQHYIVMLGTTVLIPTSLVPQMGGGNEEKAKVIQTLLFVAGLNTLLQSLFGTRLPAVMGGSYTFVPSTISIILA 115 (421)
Q Consensus 36 ~~~~~Glq~~l~m~~~~v~~p~il~~a~gl~~~~~~~~i~a~~~~~gi~tllq~~~G~rlPiv~gps~~~~~~~~~i~~~ 115 (421)
.++..|+..+++-+.+.+++-+..+++.|++++|+.+|+.+.++.+|+.|+..++. +|+|++.+||..... +.+...
T Consensus 6 s~~~aG~va~lvg~tg~~aiv~qaa~a~g~s~~q~~SWl~al~~~~Gl~~i~lSl~-yR~Pi~~AWStPGaA--lL~~~~ 82 (378)
T PF03594_consen 6 SAVSAGFVAVLVGYTGPVAIVLQAAQAAGASPAQIASWLFALYLGMGLTSILLSLR-YRMPIVTAWSTPGAA--LLATSL 82 (378)
T ss_pred HHHHHHHHHHHhhccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCchhhcchHHHH--HHHHhc
Confidence 57889999999999999888888888899999999999999999999999999985 999999999853222 222211
Q ss_pred cccCCCCCCChhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCccchHHHHHHHHhHhhhhhcCCccchhhchH
Q 014618 116 GRFSNYSGDPVEKFKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFLSPLSVVPLISLVGFGLYEFGFPGVAKCVEIGL 195 (421)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~ga~lv~Gll~~llg~~gl~~~l~~~iPp~V~g~~l~~IGl~l~~~~~~~~~~~~~v~~ 195 (421)
.+ ++++++.|+++++|++.+++|++|+++|++|++|+.+...+++.+-+..--..++...+++.+..
T Consensus 83 ~~-------------~~~~eavGAfl~~~~Li~l~G~tg~~~rl~~~IP~~ia~AMLAGvLl~f~l~~f~a~~~~P~l~~ 149 (378)
T PF03594_consen 83 PG-------------YSFAEAVGAFLVAGALILLLGVTGLFGRLMRRIPPPIASAMLAGVLLPFGLAAFTALQADPLLVG 149 (378)
T ss_pred cC-------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 12 57999999999999999999999999999999999999999887755444444455556777766
Q ss_pred HHHHHHHHHHHHhhhhhhccccchhhHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccccccCccCcCCCCCceecCCCC
Q 014618 196 PQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDAAPWIRVPWPF 275 (421)
Q Consensus 196 ~~l~~~~~l~~~~~~~~~~~~~~~~~~aiLigiv~g~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~P~~~ 275 (421)
..++..++..|+ .++++++.++++|.++++..|.. +... .+ ..++.|
T Consensus 150 ~ml~~~l~~~r~-----------~pr~av~~al~~g~~~a~~~g~~----------------~~~~----~~-~~~~~p- 196 (378)
T PF03594_consen 150 PMLAVFLLARRF-----------SPRYAVLAALVAGVAVAALTGQL----------------HPSA----LQ-LSLAHP- 196 (378)
T ss_pred HHHHHHHHHHHH-----------cchhHHHHHHHHHHHHHHhcCCC----------------Cccc----cc-ccccee-
Confidence 665555444322 45789999999999988776542 1111 11 123322
Q ss_pred CcCCCcccHHHHHHH-HHHHHHHHHHHHHHHHHHHhhhCCCCCCCccCCcceehhhhHHHHhhhcCCCCCCcccccchhh
Q 014618 276 QWGAPSFDAGEAFAM-MMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILLSGLFGTVNGTSVSVENAGL 354 (421)
Q Consensus 276 ~~~~p~f~~~~i~~~-~~~~lv~~~es~g~~~a~~~~~~~~~~~~~~~~r~l~~~Gl~~i~sgl~G~~~~t~~~~~n~g~ 354 (421)
.|..|+||+..++.+ ++++++.+......-.++-|..|+ +++.|+-+...|++|++.+.||+++ .|.+.
T Consensus 197 ~~~~P~Fs~~a~v~lalPL~ivtmasQnlpG~aVL~a~GY----~~p~~~~~~~tGl~s~l~ApfGg~~------~nlAa 266 (378)
T PF03594_consen 197 VFTTPEFSWSALVSLALPLFIVTMASQNLPGIAVLRAAGY----QPPVNPLITVTGLASLLAAPFGGHA------VNLAA 266 (378)
T ss_pred EEECCcccHHHHHHHHHHHHHHHHHhcchHHHHHHHHcCC----CCCchHHHHHHHHHHHHHhhhchhh------hHHHH
Confidence 577899999998886 589999998766666778787774 5789999999999999999999987 45544
Q ss_pred hhhccC---------CchhH-HHHHHHHHHHHHhh-hHHHHHHhhCChHHHHHH-HHHHHHHHHHHHHHHhH
Q 014618 355 LALTRV---------GSRRV-VQISAGFMIFFSVL-GKFGAVFASIPAPIVAAL-YCLFFAYVLEVLASFSS 414 (421)
Q Consensus 355 i~~tg~---------~sr~~-~~~a~~~ll~l~~~-p~~~~l~~~IP~avlggv-ll~~~g~i~~~gi~~i~ 414 (421)
+...-| ..||. .+.+|++++++|++ +.+..++...|.+.+..+ .+.++|.+..+=-+-++
T Consensus 267 itaAIc~g~eah~dp~rRy~Aav~~Gv~yll~Gl~a~~~v~l~~~lP~~li~~lAGLALlg~l~~sl~~A~~ 338 (378)
T PF03594_consen 267 ITAAICAGPEAHPDPSRRYIAAVAAGVFYLLFGLFAAALVALFAALPPALIAALAGLALLGTLGGSLQTAFS 338 (378)
T ss_pred HHHHHHcCCccCCCcccchHHHHHHhHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 433222 34665 68899999999999 689999999999988876 66677887765444443
No 12
>COG0659 SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]
Probab=99.94 E-value=2.2e-25 Score=233.82 Aligned_cols=315 Identities=17% Similarity=0.247 Sum_probs=230.0
Q ss_pred hHHHHHHHHHHHHHHhcceehhhhHhhh--hcCCChHHHHHHHHHHHHHHHHHHHHHHHhCCCcceeeecccchHHHHHH
Q 014618 34 WPEAILLGFQHYIVMLGTTVLIPTSLVP--QMGGGNEEKAKVIQTLLFVAGLNTLLQSLFGTRLPAVMGGSYTFVPSTIS 111 (421)
Q Consensus 34 ~~~~~~~Glq~~l~m~~~~v~~p~il~~--a~gl~~~~~~~~i~a~~~~~gi~tllq~~~G~rlPiv~gps~~~~~~~~~ 111 (421)
++.++++|++-... ++|..++- +.|.++. ..+.++.++.++.+++|.+--.+.||..++...+..
T Consensus 21 l~~Dl~AGltva~v------alP~ama~a~~aGv~p~-------~GLyas~i~~~v~alfGgs~~~i~GPt~a~~~v~a~ 87 (554)
T COG0659 21 LRGDLLAGLTVAAV------ALPLAMAFAIAAGVPPE-------AGLYASIVAGIIYALFGGSRGLISGPTGAFAVVLAA 87 (554)
T ss_pred hHHHHHHHHHHHHH------HhHHHHHHHHHcCCCHH-------HHHHHHHHHHHHHHHHcCCccceeccchhhHHHHHH
Confidence 67899999996544 45655543 4799984 889999999999999976666799997666555545
Q ss_pred HHHhcccCCCCCCChhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCccchHHHHHHHHhHhhhhhcCCcc---
Q 014618 112 IILAGRFSNYSGDPVEKFKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFLSPLSVVPLISLVGFGLYEFGFPGVA--- 188 (421)
Q Consensus 112 i~~~~~~~~~~~~~~~~~~~~~~~~~ga~lv~Gll~~llg~~gl~~~l~~~iPp~V~g~~l~~IGl~l~~~~~~~~~--- 188 (421)
++.+.. .++++.+..+++++|++++++|++|+ +++.|++|++|+-+++..+|+.++..+++...
T Consensus 88 ~i~~~~------------~~g~~~~~~~tllaGv~~i~~G~lRL-G~li~fip~pVl~Gf~~Giai~I~~~Ql~~~~G~~ 154 (554)
T COG0659 88 VIASLV------------ETGLALAFLATLLAGVFQILLGLLRL-GRLIRFIPRPVLIGFTAGIAILIILTQLPVLLGLA 154 (554)
T ss_pred HHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHHHh-hhhhhhccHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 544210 15789999999999999999999998 99999999999888999999977665543211
Q ss_pred ---c-------------------hhhchHHHHHHHHHHHHHhhhhhhccccchhhHHHHHHHHHHHHHHHHHhhcCCCCC
Q 014618 189 ---K-------------------CVEIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYND 246 (421)
Q Consensus 189 ---~-------------------~~~v~~~~l~~~~~l~~~~~~~~~~~~~~~~~~aiLigiv~g~~~a~~~g~~~~~~~ 246 (421)
. ...++..++.+++.+ +++ ..|.++.++++++++.+++.++...
T Consensus 155 ~~~~~~~~~~~~l~~~~~~~~~~~~~lg~~~l~il~~~----~~~------~~~~P~~liaiv~~t~i~~~~~~~~---- 220 (554)
T COG0659 155 SKVSGFWAKVSALFTVLLTINLATLLLGLLTLAILLFL----PRL------TPRIPSPLIALVLGTLIVWIFPLDS---- 220 (554)
T ss_pred ccccchHHHHHHHHHhcccccHHHHHHHHHHHHHHHHc----cch------hhhCCcHHHHHHHHHHHHHHhcCCc----
Confidence 0 123344444444333 322 1346778999999999999886521
Q ss_pred CCcccccccccCccCcCCCCCceecCCCC-CcCCCcccHHHHHH----HHHHHHHHHHHHHHHHHHHHhhhCCCCCCCcc
Q 014618 247 AAPKTQASCRTDRAGLIDAAPWIRVPWPF-QWGAPSFDAGEAFA----MMMASFVALVESTGAFFAVARYASATPMPPSV 321 (421)
Q Consensus 247 ~~~~~~~~~~~~~~~~i~~~~~~~~P~~~-~~~~p~f~~~~i~~----~~~~~lv~~~es~g~~~a~~~~~~~~~~~~~~ 321 (421)
+ +.+ +..++ +|..+ +|..|.++++.+.. .+.++++.++|++.+..+.+++.++ +.|
T Consensus 221 --~------~~G--~i~~~-----lp~~~~~~~~P~~~~~~~~~l~~~al~la~lg~iesllta~~~~~~~~~----~~d 281 (554)
T COG0659 221 --L------RYG--EIPGS-----LPSGLPHFRLPNVSLSLLLALLPYALALALLGLLESLLTAVSFDGMTGT----KHD 281 (554)
T ss_pred --h------hcc--cCccc-----CCcCCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC----CCC
Confidence 0 001 11111 22211 45566776655443 4568999999999999999998764 578
Q ss_pred CCcceehhhhHHHHhhhcCCCCCCcccccchhhhhhccCCchhHHHHHHHHHHHHHhhhHHHHHHhhCChHHHHHHHHHH
Q 014618 322 LSRGVGWQGVGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLF 401 (421)
Q Consensus 322 ~~r~l~~~Gl~~i~sgl~G~~~~t~~~~~n~g~i~~tg~~sr~~~~~a~~~ll~l~~~p~~~~l~~~IP~avlggvll~~ 401 (421)
.|||+++||++|+.+|+||++|.|... .+......+|.+||.++++++++++++-++ ++.++..||.+++++++++
T Consensus 282 ~nrELiaqGiaNi~sglfgg~p~~g~~-srS~~nv~sGarT~lsgi~~a~~lll~l~~--~~~~~~~IP~a~Laavli~- 357 (554)
T COG0659 282 SNRELIAQGIANIASGLFGGIPATGSI-SRSAINIKSGARTRLSGIIHAALLLLLLLF--LAPLVSYIPLAALAAVLIL- 357 (554)
T ss_pred CCHHHHHhhHHHHHHHHhCCccccchh-HHHHHHHHhCCcChHHHHHHHHHHHHHHHH--HHHHHHhCcHHHHHHHHHH-
Confidence 999999999999999999999999988 677777889999999999998876444432 3459999999999998765
Q ss_pred HHHHHHHHHHHhHhcC
Q 014618 402 FAYVLEVLASFSSVTS 417 (421)
Q Consensus 402 ~g~i~~~gi~~i~~~d 417 (421)
.++++++|..
T Consensus 358 ------v~~~l~~~~~ 367 (554)
T COG0659 358 ------VGWGLLDWSL 367 (554)
T ss_pred ------HHHHhccHHH
Confidence 4555665543
No 13
>COG3135 BenE Uncharacterized protein involved in benzoate metabolism [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.93 E-value=3.2e-23 Score=199.04 Aligned_cols=319 Identities=20% Similarity=0.258 Sum_probs=246.0
Q ss_pred HHHHHHHHHHHHHhcceehhhhHhhhhcCCChHHHHHHHHHHHHHHHHHHHHHHHhCCCcceeeecccchHHHHHHHHHh
Q 014618 36 EAILLGFQHYIVMLGTTVLIPTSLVPQMGGGNEEKAKVIQTLLFVAGLNTLLQSLFGTRLPAVMGGSYTFVPSTISIILA 115 (421)
Q Consensus 36 ~~~~~Glq~~l~m~~~~v~~p~il~~a~gl~~~~~~~~i~a~~~~~gi~tllq~~~G~rlPiv~gps~~~~~~~~~i~~~ 115 (421)
+++.+|++.+++-+.+..++-+..+++.|.+++|+++|+.+..+..|+.|+..++. +|.|++.+||..... .++.+
T Consensus 21 ~~l~ag~va~~vG~~~s~aii~~aa~a~gas~aq~aSwl~al~l~mGv~ti~Ls~~-yR~Pv~~aWSTPG~a---ll~as 96 (402)
T COG3135 21 QTLLAGFVAVLVGYASSLAIIIQAAQAAGASPAQIASWLTALGLAMGVSTLTLSLR-YRVPVLTAWSTPGAA---LLVAS 96 (402)
T ss_pred hhhhhhhHHheeccCccHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhh-hccceeeeecCccHH---HHHhc
Confidence 68889999999999998888888888899999999999999999999999999985 999999999864333 22222
Q ss_pred -cccCCCCCCChhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCccchHHHHHHHHhHhhhhhcCCccchhhch
Q 014618 116 -GRFSNYSGDPVEKFKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFLSPLSVVPLISLVGFGLYEFGFPGVAKCVEIG 194 (421)
Q Consensus 116 -~~~~~~~~~~~~~~~~~~~~~~ga~lv~Gll~~llg~~gl~~~l~~~iPp~V~g~~l~~IGl~l~~~~~~~~~~~~~v~ 194 (421)
.+ .++.++.|+++++|.+.++.|++|.++|++|.+|+.+.-.+++.|=+...-.+++...+++.+.
T Consensus 97 l~g-------------~s~~eaVGAfiVt~~li~l~G~~~~l~rl~~~IP~sla~AmlAGILL~F~l~a~~a~~~~p~l~ 163 (402)
T COG3135 97 LGG-------------LSFAEAVGAFIVTGALIILCGLTGPLTRLMRIIPPSLAAAMLAGILLRFGLKAFKALPTQPLLV 163 (402)
T ss_pred cCC-------------CCHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhccCCChHHH
Confidence 22 5799999999999999999999999999999999998888887664433334445555677777
Q ss_pred HHHHHHHHHHHHHhhhhhhccccchhhHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccccccCccCcCCCCCceecCCC
Q 014618 195 LPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDAAPWIRVPWP 274 (421)
Q Consensus 195 ~~~l~~~~~l~~~~~~~~~~~~~~~~~~aiLigiv~g~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~P~~ 274 (421)
+..++..++. |. +-.+++++..+++|..++...|..+ + ....+....|
T Consensus 164 lpmv~~~ll~----r~-------f~pr~aV~aalvvgv~va~~~G~~~---~----------------~~~~~~~~~p-- 211 (402)
T COG3135 164 LPMVLAYLLA----RV-------FAPRYAVIAALVVGVLVAALLGDLH---T----------------ALVALEISTP-- 211 (402)
T ss_pred HHHHHHHHHH----HH-------cCchHHHHHHHHHHHHHHHHhCccc---c----------------cccccccCcc--
Confidence 6665554433 32 2447999999999999998887431 1 1112223344
Q ss_pred CCcCCCcccHHHHHHH-HHHHHHHHHHHHHHHHHHHhhhCCCCCCCccCCcceehhhhHHHHhhhcCCCCCCcccccchh
Q 014618 275 FQWGAPSFDAGEAFAM-MMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILLSGLFGTVNGTSVSVENAG 353 (421)
Q Consensus 275 ~~~~~p~f~~~~i~~~-~~~~lv~~~es~g~~~a~~~~~~~~~~~~~~~~r~l~~~Gl~~i~sgl~G~~~~t~~~~~n~g 353 (421)
.|..|+||+.+++.+ ++++++.+......-.++-|..|+ +++.+--+..+|+.++.++.||++. .|.+
T Consensus 212 -~~v~P~Fs~~A~l~lalPL~lvtmasQN~pGiAvLka~gY----~pp~~pl~~~TGl~sll~ApfG~~t------~nLa 280 (402)
T COG3135 212 -TWVTPEFSFAAMLSLALPLFLVTMASQNLPGIAVLKAAGY----QPPPSPLIVATGLASLLSAPFGGHT------VNLA 280 (402)
T ss_pred -eeeCCcccHHHHHHHhHHHHHHHHHhccCccceeehhcCC----CCCCchHHHHhHHHHHHhcccccce------ecHH
Confidence 677899999998886 589999998776666677777664 5678889999999999999999976 4555
Q ss_pred hhhhccCC---------chhH-HHHHHHHHHHHHhh-hHHHHHHhhCChHHHHHH-HHHHHHHHHHHHHHHhH
Q 014618 354 LLALTRVG---------SRRV-VQISAGFMIFFSVL-GKFGAVFASIPAPIVAAL-YCLFFAYVLEVLASFSS 414 (421)
Q Consensus 354 ~i~~tg~~---------sr~~-~~~a~~~ll~l~~~-p~~~~l~~~IP~avlggv-ll~~~g~i~~~gi~~i~ 414 (421)
.+.+.-|. .||. ..++|.+.+++|+| +.+.+++...|.+.+..+ .+.+.|.++.+-.+-++
T Consensus 281 AItAAic~gpdaHpD~~rry~Aa~~agi~ylv~GlF~~~~~~l~~alP~~li~~lAGLALlg~~~~~l~~A~~ 353 (402)
T COG3135 281 AITAAICTGPDAHPDPARRYTAALVAGIFYLLAGLFGGALVGLMAALPASLIAALAGLALLGTLGNSLQAALK 353 (402)
T ss_pred HHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 55443333 3554 68899999999999 689999999999987775 55667777765544444
No 14
>PRK11660 putative transporter; Provisional
Probab=99.90 E-value=1.8e-21 Score=206.61 Aligned_cols=317 Identities=14% Similarity=0.168 Sum_probs=208.1
Q ss_pred ChHHHHHHHHHHHHHHhcceehhhhHhhhhcCCChHHHHHHHHHHHHHHHHHHHHHHHhCCCcceeeecccchHHHHHHH
Q 014618 33 PWPEAILLGFQHYIVMLGTTVLIPTSLVPQMGGGNEEKAKVIQTLLFVAGLNTLLQSLFGTRLPAVMGGSYTFVPSTISI 112 (421)
Q Consensus 33 ~~~~~~~~Glq~~l~m~~~~v~~p~il~~a~gl~~~~~~~~i~a~~~~~gi~tllq~~~G~rlPiv~gps~~~~~~~~~i 112 (421)
.++.++++|++-.+...+..+++..+ .|+++. ..+.++.+.+++.+++|+.--++.||+.........+
T Consensus 28 ~l~~D~iAGltv~~~~iPq~mayA~l----ag~pp~-------~GLysa~~~~~vyal~Gss~~~~~Gp~a~~~~~~~~~ 96 (568)
T PRK11660 28 RFTRDLIAGITVGIIAIPLAMALAIA----SGVPPQ-------YGLYTAAVAGIVIALTGGSRFSVSGPTAAFVVILYPV 96 (568)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHH----cCCChH-------HHHHHHHHHHHHHHHhcCCCCcccChhHHHHHHHHHH
Confidence 37899999999776655544444432 788884 5789999999999999877778899975433222222
Q ss_pred HHhcccCCCCCCChhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCccchHHHHHHHHhHhhhhhcCCc-----
Q 014618 113 ILAGRFSNYSGDPVEKFKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFLSPLSVVPLISLVGFGLYEFGFPGV----- 187 (421)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~ga~lv~Gll~~llg~~gl~~~l~~~iPp~V~g~~l~~IGl~l~~~~~~~~----- 187 (421)
..+ ++++.+..+++++|++++++|++|+ +++.|++|..|+.+++..+|+.+...+++..
T Consensus 97 ~~~---------------~~~~~~~~~~~l~Gii~~l~gllrl-G~l~~fip~pVi~Gf~~g~al~I~~~Ql~~~lG~~~ 160 (568)
T PRK11660 97 SQQ---------------FGLAGLLVATLMSGIILILMGLARL-GRLIEYIPLSVTLGFTSGIGIVIATLQIKDFFGLQM 160 (568)
T ss_pred HHH---------------hhHHHHHHHHHHHHHHHHHHHHHhh-hHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 222 2456677789999999999999998 8999999999999899888886654432111
Q ss_pred ---cc-------------------hhhchHHHHHHHHHHHHHhhhhhhccccchhhHHHHHHHHHHHHHHHHHhhcCCCC
Q 014618 188 ---AK-------------------CVEIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYN 245 (421)
Q Consensus 188 ---~~-------------------~~~v~~~~l~~~~~l~~~~~~~~~~~~~~~~~~aiLigiv~g~~~a~~~g~~~~~~ 245 (421)
.+ ...+++.++++++++ |++ ..|.+..++++++++++++.++..+ ++
T Consensus 161 ~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~l~lll~~----~~~------~~~iP~~li~iiv~t~~~~~~~~~~-~~ 229 (568)
T PRK11660 161 AHVPEHYLEKVGALFQALPTINWGDALIGIVTLGVLILW----PRL------KIRLPGHLPALLAGTAVMGVLNLLG-GH 229 (568)
T ss_pred CCCCccHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHH----Hhh------cccCchHHHHHHHHHHHHHHHhccC-CC
Confidence 00 112344444444332 222 1234667889999999888876421 00
Q ss_pred CCCcccccccccCccCcCCCCCceecCCCC-CcCCC-----------cccHHHH----HHHHHHHHHHHHHHHHHHHHHH
Q 014618 246 DAAPKTQASCRTDRAGLIDAAPWIRVPWPF-QWGAP-----------SFDAGEA----FAMMMASFVALVESTGAFFAVA 309 (421)
Q Consensus 246 ~~~~~~~~~~~~~~~~~i~~~~~~~~P~~~-~~~~p-----------~f~~~~i----~~~~~~~lv~~~es~g~~~a~~ 309 (421)
.+..+... ..... .+...+ .+|..+ ++..| .++|+.+ ...+.+.++.++|++.+....+
T Consensus 230 v~~vg~~~--~~~~~--~g~~~~-~ip~~~p~~~~p~~~~~~~~~~~~~~~~~~~~ll~~a~~iaiv~~iesl~~~~~~~ 304 (568)
T PRK11660 230 VATIGSRF--HYVLA--DGSQGN-GIPPLLPQFVLPWNLPGADGQPFTLSWDLIRALLPAAFSMAMLGAIESLLCAVVLD 304 (568)
T ss_pred ceeecccc--ccccc--cccccc-CCCCCCCCCCCCccccccccccCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000000 00000 000000 111100 11112 2355543 3446688889999998888777
Q ss_pred hhhCCCCCCCccCCcceehhhhHHHHhhhcCCCCCCcccccchhhhhhccCCchhHHHHHHHHHHHH-HhhhHHHHHHhh
Q 014618 310 RYASATPMPPSVLSRGVGWQGVGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFF-SVLGKFGAVFAS 388 (421)
Q Consensus 310 ~~~~~~~~~~~~~~r~l~~~Gl~~i~sgl~G~~~~t~~~~~n~g~i~~tg~~sr~~~~~a~~~ll~l-~~~p~~~~l~~~ 388 (421)
+..+ ++.|.|||+.++|++|+++|+||++|.+++. ....+...+|.++|.+++++++++++. .++ ..++..
T Consensus 305 ~~~~----~~~d~n~EL~a~G~aNi~~~~fgg~p~~~s~-srSa~n~~aGarT~la~iv~a~~~ll~ll~l---~~ll~~ 376 (568)
T PRK11660 305 GMTG----TKHSANSELVGQGLGNIVAPFFGGITATAAI-ARSAANVRAGATSPISAVIHALLVLLALLVL---APLLSY 376 (568)
T ss_pred HhcC----CCCCCcHHHHHHhHHHHHHHHhCcccccchH-HHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH---HHHHHh
Confidence 7655 3568999999999999999999999999886 455666778999999998888765333 333 239999
Q ss_pred CChHHHHHHHHH
Q 014618 389 IPAPIVAALYCL 400 (421)
Q Consensus 389 IP~avlggvll~ 400 (421)
||.+++++++++
T Consensus 377 iP~~vLa~ili~ 388 (568)
T PRK11660 377 LPLSAMAALLLM 388 (568)
T ss_pred CcHHHHHHHHHH
Confidence 999999999876
No 15
>TIGR00815 sulP high affinity sulphate transporter 1. (2) SO42- (out) + nHCO3- (in) SO42- (in) + nHCO3- (out).
Probab=99.88 E-value=8.4e-21 Score=201.41 Aligned_cols=319 Identities=15% Similarity=0.152 Sum_probs=213.7
Q ss_pred hHHHHHHHHHHHHHHhcceehhhhHhhhhcCCChHHHHHHHHHHHHHHHHHHHHHHHhCCCcceeeecccchHHHHHHHH
Q 014618 34 WPEAILLGFQHYIVMLGTTVLIPTSLVPQMGGGNEEKAKVIQTLLFVAGLNTLLQSLFGTRLPAVMGGSYTFVPSTISII 113 (421)
Q Consensus 34 ~~~~~~~Glq~~l~m~~~~v~~p~il~~a~gl~~~~~~~~i~a~~~~~gi~tllq~~~G~rlPiv~gps~~~~~~~~~i~ 113 (421)
++.++++|++-.+...+..+++.. ..|+++. ..+.++.+..++.+++|+.-=++.||..+.-.....++
T Consensus 14 l~~Di~aGltv~~~~iP~~~ayA~----laglpp~-------~GLysa~~~~iv~alfGss~~~i~Gp~a~~sl~~~~~v 82 (563)
T TIGR00815 14 FKGDLMAGLTVGILLIPQAMAYAI----LAGLSPI-------YGLYTSFVPPFIYALFGTSRDIAIGPVAVMSLLLGSVI 82 (563)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHH----HcCCCch-------hhhHHHHHHHHHhheecCCCcccCCHHHHHHHHHHHHH
Confidence 678999999976655444443332 2689884 67899999999999998777788999654333333344
Q ss_pred HhcccCCCCCCChhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCccchHHHHHHHHhHhhhhhc------CC-
Q 014618 114 LAGRFSNYSGDPVEKFKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFLSPLSVVPLISLVGFGLYEFGF------PG- 186 (421)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~ga~lv~Gll~~llg~~gl~~~l~~~iPp~V~g~~l~~IGl~l~~~~~------~~- 186 (421)
.+.+..+ .++. .....+...++++|++++++|++|+ +++.|++|..|+.+++..+|+.++..++ +.
T Consensus 83 ~~~~~~~---~~~~---~~~~~a~~l~~l~Gi~~~~~g~lrl-G~l~~~is~~Vi~Gf~~g~a~~i~~~Ql~~~~G~~~~ 155 (563)
T TIGR00815 83 ARVGLQY---LFDC---DAIRLAFTLTLLAGIFQVILGLLRL-GFLIEFLSHAVISGFMTGAAITIGLSQLKGLLGISIF 155 (563)
T ss_pred HHhcCCC---Cccc---HHHHHHHHHHHHHHHHHHHHHHHhh-hHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 4333211 1111 2356677889999999999999998 9999999999999999999987764332 21
Q ss_pred -cc---------------c----hhh---chHHHHHHHHHHHHHhhhhhhccccc--hhhHHHHHHHHHHHHHHHHHhhc
Q 014618 187 -VA---------------K----CVE---IGLPQLVIIVFISQYLPHVIKRGKNI--FDRFAVIFSVVIVWIYAHLLTVG 241 (421)
Q Consensus 187 -~~---------------~----~~~---v~~~~l~~~~~l~~~~~~~~~~~~~~--~~~~aiLigiv~g~~~a~~~g~~ 241 (421)
-. + ++. +++.+++++. ..|++.++.++. ...+..++.+++++++.+.++..
T Consensus 156 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~l~----~~~~~~~~~~~~~~~~~p~~li~vi~~~~~~~~~~~~ 231 (563)
T TIGR00815 156 NTRTDTLGVVISTWAGLPNTHNWNWCTLVIGLVLLLFLL----YTKKLGKRNKKLLFAPAVAPLLVVILATLAVTIGLHK 231 (563)
T ss_pred CCCCChHHHHHHHHHHhhhccccchHHHHHHHHHHHHHH----HHHHhhhhccchhcccccHHHHHHHHHHHHHHHHccC
Confidence 00 0 121 2222222222 233332211111 12356788888888877665321
Q ss_pred CCCCCCCcccccccccCccCcCCCCCceecCCCCCcCCCcccHHHH----HHHHHHHHHHHHHHHHHHHHHHhhhCCCCC
Q 014618 242 GAYNDAAPKTQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEA----FAMMMASFVALVESTGAFFAVARYASATPM 317 (421)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~P~~~~~~~p~f~~~~i----~~~~~~~lv~~~es~g~~~a~~~~~~~~~~ 317 (421)
.+ +.. .+++.|- .+| .+..|.+||..+ ...+.++++.++|++.+.++.++..+
T Consensus 232 -~~-------------~~~-~~g~ip~-g~p---~~~~~~~~~~~~~~l~~~a~~ia~v~~~e~l~~a~~~~~~~~---- 288 (563)
T TIGR00815 232 -KQ-------------GVS-ILGHIPS-GLS---FFPPITLDWELLPTLAPDAIAIAIVGLIESIAIARSFARMTG---- 288 (563)
T ss_pred -CC-------------CeE-EEeecCC-CCC---CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC----
Confidence 00 110 1111121 122 233456665543 33467999999999999998888765
Q ss_pred CCccCCcceehhhhHHHHhhhcCCCCCCcccccchhhhhhccCCchhHHHHHHHHHHHHHhhhHHHHHHhhCChHHHHHH
Q 014618 318 PPSVLSRGVGWQGVGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAAL 397 (421)
Q Consensus 318 ~~~~~~r~l~~~Gl~~i~sgl~G~~~~t~~~~~n~g~i~~tg~~sr~~~~~a~~~ll~l~~~p~~~~l~~~IP~avlggv 397 (421)
++.+.|||+.++|++|+++|+||++|.+... .+..+...+|+++|.+.+++++++++..++ +..++..+|.++++++
T Consensus 289 ~~~d~n~El~a~G~~N~~~~~fg~~p~~~s~-srs~~~~~~G~~t~~a~i~~~~~~l~~~l~--~~~~l~~iP~~~la~i 365 (563)
T TIGR00815 289 YKIDANQELVAQGIANIVGSFFSCYPATGSL-SRTAVNAKAGCRTQLSGVVTAIVVLLVLLV--LTPLFYYIPQAALAAI 365 (563)
T ss_pred CCCCCcHHHHHhhHHHHHHHHhCccCCCCcc-hHHHHHHhcCCcchHHHHHHHHHHHHHHHH--HHHHHHhChHHHHHHH
Confidence 3578999999999999999999999998777 566777789999999999888876554443 3459999999999999
Q ss_pred HHH
Q 014618 398 YCL 400 (421)
Q Consensus 398 ll~ 400 (421)
+++
T Consensus 366 li~ 368 (563)
T TIGR00815 366 IIS 368 (563)
T ss_pred HHH
Confidence 876
No 16
>PF00916 Sulfate_transp: Sulfate transporter family; InterPro: IPR011547 A number of proteins involved in the transport of sulphate across a membrane as well as some yet uncharacterised proteins have been shown [, ] to be evolutionary related. These proteins are: Neurospora crassa sulphate permease II (gene cys-14). Yeast sulphate permeases (genes SUL1 and SUL2). Rat sulphate anion transporter 1 (SAT-1). Mammalian DTDST, a probable sulphate transporter which, in human, is involved in the genetic disease, diastrophic dysplasia (DTD). Sulphate transporters 1, 2 and 3 from the legume Stylosanthes hamata. Human pendrin (gene PDS), which is involved in a number of hearing loss genetic diseases. Human protein DRA (Down-Regulated in Adenoma). Soybean early nodulin 70. Escherichia coli hypothetical protein ychM. Caenorhabditis elegans hypothetical protein F41D9.5. These proteins are highly hydrophobic and seem to contain about 12 transmembrane domains.; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.67 E-value=9.7e-17 Score=155.89 Aligned_cols=232 Identities=20% Similarity=0.238 Sum_probs=148.0
Q ss_pred HHhhhhhhhhhhccCccchHHHHHHHHhHhhhhhcCCcc-----------------------c--hh---hchHHHHHHH
Q 014618 150 LGFSGLWRNVTRFLSPLSVVPLISLVGFGLYEFGFPGVA-----------------------K--CV---EIGLPQLVII 201 (421)
Q Consensus 150 lg~~gl~~~l~~~iPp~V~g~~l~~IGl~l~~~~~~~~~-----------------------~--~~---~v~~~~l~~~ 201 (421)
+|++|+ +++.|++|+.|+.+++..+|+.+...+++.+. + ++ .++..++.++
T Consensus 1 lGllrl-G~l~~~ip~pVi~Gf~~g~ai~I~~~Ql~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 79 (280)
T PF00916_consen 1 LGLLRL-GFLVRFIPRPVISGFLAGIAILIIFSQLPNLLGIPVVPSHEGLFSFIRALFQLISTITNWPTLAIGLVALVFL 79 (280)
T ss_pred Cccccc-cHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccchhhhhhhhhhhccchhhhhhhhHHHHHH
Confidence 367887 99999999999999999999977654432110 0 11 1122222222
Q ss_pred HHHHHHhhhhhhccccchhhHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccccccCccCcCCCCCceecCCCCCcCCC-
Q 014618 202 VFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDAAPWIRVPWPFQWGAP- 280 (421)
Q Consensus 202 ~~l~~~~~~~~~~~~~~~~~~aiLigiv~g~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~P~~~~~~~p- 280 (421)
... ++.++. ++.+...+.+..++.+++++++++..+... ++ ++. +++.|. .+| ++..|
T Consensus 80 ~~~-~~~~~~-~~~~~~~~~p~~li~vv~~~~~~~~~~~~~-~~-----------v~~---~~~i~~-~lp---~~~~p~ 138 (280)
T PF00916_consen 80 LII-RLLPKR-LPSRFWPPIPAPLIVVVLGTLLSWLFLLDK-YG-----------VAI---VGEIPS-GLP---PPSLPS 138 (280)
T ss_pred hhh-hhhhhh-ccccccccccccceeeehhhhhhhhhhhcc-cc-----------ccc---cccccc-cCc---cccCcc
Confidence 222 222210 011223445567888888888877664210 00 111 111110 123 12233
Q ss_pred -cccHHH----HHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCccCCcceehhhhHHHHhhhcCCCCCCcccccchhhh
Q 014618 281 -SFDAGE----AFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILLSGLFGTVNGTSVSVENAGLL 355 (421)
Q Consensus 281 -~f~~~~----i~~~~~~~lv~~~es~g~~~a~~~~~~~~~~~~~~~~r~l~~~Gl~~i~sgl~G~~~~t~~~~~n~g~i 355 (421)
.++|+. +...+.+.++..+|++.+.++.++..+ ++.|.|||++++|++|+++|+||++|.+... .+..+.
T Consensus 139 ~~~~~~~~~~~~~~a~~ia~v~~~~s~~~~~~~~~~~~----~~~d~n~El~a~G~aNi~s~~~gg~p~~~s~-srs~~~ 213 (280)
T PF00916_consen 139 FDISWSLILDLLPTALAIAIVGFIESLLIAKSIAKKTG----YRIDPNQELIALGLANIVSGLFGGMPGSGSF-SRSAVN 213 (280)
T ss_pred cccccccccccchhHHHHHHHHHHHHHHhhhhhccccc----ccCCcHHHHHHhhhccccchhhccccccccc-ccchHH
Confidence 344433 344567899999999998888877654 4568999999999999999999999998887 566777
Q ss_pred hhccCCchhHHHHHHHHHHHHHhhhHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhHhcC
Q 014618 356 ALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVLEVLASFSSVTS 417 (421)
Q Consensus 356 ~~tg~~sr~~~~~a~~~ll~l~~~p~~~~l~~~IP~avlggvll~~~g~i~~~gi~~i~~~d 417 (421)
...|.+||.+.++++++++++.++ +..++..+|.+++++++++ .+++.+||.+
T Consensus 214 ~~~Ga~t~~s~~~~~~~~l~~l~~--~~~~l~~iP~~~La~ili~-------~~~~l~~~~~ 266 (280)
T PF00916_consen 214 YRAGARTRLSGLISALFVLLVLLF--LAPLLAYIPKAVLAAILIV-------VGISLIDWSS 266 (280)
T ss_pred HhcCcceeehhHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHH-------HHHhhcCHHH
Confidence 789999999998888776443332 2349999999999999776 3555555543
No 17
>KOG0236 consensus Sulfate/bicarbonate/oxalate exchanger SAT-1 and related transporters (SLC26 family) [Inorganic ion transport and metabolism]
Probab=99.58 E-value=4.3e-13 Score=144.19 Aligned_cols=320 Identities=16% Similarity=0.193 Sum_probs=202.6
Q ss_pred HHHHHHHHHHHHHHhcceehhhhHhhhh--cCCChHHHHHHHHHHHHHHHHHHHHHHHhCCCcceeeecccchHHHHHH-
Q 014618 35 PEAILLGFQHYIVMLGTTVLIPTSLVPQ--MGGGNEEKAKVIQTLLFVAGLNTLLQSLFGTRLPAVMGGSYTFVPSTIS- 111 (421)
Q Consensus 35 ~~~~~~Glq~~l~m~~~~v~~p~il~~a--~gl~~~~~~~~i~a~~~~~gi~tllq~~~G~rlPiv~gps~~~~~~~~~- 111 (421)
..++++|++ .+++.+|.-++-+ +|+++ ...+.++-+..++..+||+.-.+..||.. .+..++.
T Consensus 81 ~~DliaGlt------vg~l~VPQ~iaYa~la~lpp-------iyGLYssf~~~~iY~~fGtsr~isiG~~a-v~sLmv~~ 146 (665)
T KOG0236|consen 81 LGDLIAGLT------VGSLSVPQGLAYALLAGLPP-------IYGLYSSFFPPLIYAIFGTSRHVSIGPFA-VVSLMVGT 146 (665)
T ss_pred hHHHhcCce------eeeeecchHHHHHHHcCCCh-------HHHHHHHHHHHHHheeccCCCcccccHHH-HHHHHHHH
Confidence 345555555 3566777766543 67887 47889999999999999999999988842 1111111
Q ss_pred HHHhcccCCCCCCChhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCccchHHHHHHHHhHhhhhhcCC-----
Q 014618 112 IILAGRFSNYSGDPVEKFKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFLSPLSVVPLISLVGFGLYEFGFPG----- 186 (421)
Q Consensus 112 i~~~~~~~~~~~~~~~~~~~~~~~~~ga~lv~Gll~~llg~~gl~~~l~~~iPp~V~g~~l~~IGl~l~~~~~~~----- 186 (421)
++.+. .......+ .-.+.++.+...++++|++|+++|++|+ |.+.+++|..++-+++...++.+.-.+++.
T Consensus 147 ~v~~~-v~~~~~~~--~~~~~i~va~~lt~l~Giiq~~mG~lrL-Gfl~~~lS~~~l~GFt~gaa~~I~~sQlk~llGi~ 222 (665)
T KOG0236|consen 147 VVSQV-VLSEAPSN--DIATTIQVATTLTFLTGIIQLILGLLRL-GFLVRFLSEPALSGFTTGAALHIVTSQLKVLLGIT 222 (665)
T ss_pred HHHHH-HhccCCCc--CcchhHHHHHHHHHHHHHHHHHHHHHhc-ChHHHHccHHHHhHhhhhhhhhhhHHhhHhhcccc
Confidence 11110 00000000 0125678899999999999999999998 999999997776666666666544333221
Q ss_pred -cc-----------------c------hhhchHHHHHHHHHHHH-HhhhhhhccccchhhHHHHHHHHHHHHHHHHHhhc
Q 014618 187 -VA-----------------K------CVEIGLPQLVIIVFISQ-YLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVG 241 (421)
Q Consensus 187 -~~-----------------~------~~~v~~~~l~~~~~l~~-~~~~~~~~~~~~~~~~aiLigiv~g~~~a~~~g~~ 241 (421)
.. + ++.+++..+.++ .+.+ +.++. +++-.+...+.-++.+++++++++.+...
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~L-~~~k~~~~~~-~~k~~~v~~~~~li~vIi~T~~~~~~~~~ 300 (665)
T KOG0236|consen 223 SFPRHSGPGSIVFIVFDLLANLPKTLATLVLSLIFLVVL-LLTKELNPKF-KKKLFSVPIPFELIVVIIGTLISYIFRLE 300 (665)
T ss_pred ccCCCCCceeEEEeeHHhhhcccccchhhhhHHHHHHHH-HHHHHhhhhh-cccceeecccHHHHHHHHHHHHHHHhccc
Confidence 11 0 122333333333 2233 22221 11111133445789999999999888653
Q ss_pred CCCCCCCcccccccccCccCcCCCCCceecCCCCCcCCCccc--HHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCC
Q 014618 242 GAYNDAAPKTQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFD--AGEAFAMMMASFVALVESTGAFFAVARYASATPMPP 319 (421)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~P~~~~~~~p~f~--~~~i~~~~~~~lv~~~es~g~~~a~~~~~~~~~~~~ 319 (421)
+.+.. . .+.+.|. ++|. ...|.++ ...+...+.+.++.+.|+++--+..++..+ ++
T Consensus 301 ~~~~~-----------~---~~~~i~~-g~~~---~~lp~~~~~~~~~~~~~~i~iva~~~~iai~k~fa~~~~----y~ 358 (665)
T KOG0236|consen 301 GRYGP-----------I---IVGEIPR-GFPP---PSLPPLSLTPQVIPDAFAIAIVALLEHIAIGKSFASLHG----YK 358 (665)
T ss_pred cccCC-----------e---eeccCCC-CCCC---CCCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC----Ce
Confidence 21110 0 0111110 1221 1223332 234555778999999999877776666554 45
Q ss_pred ccCCcceehhhhHHHHhhhcCCCCCCcccccchhhhhhccCCchhHHHHHHHH-HHHHHhhhHHHHHHhhCChHHHHHHH
Q 014618 320 SVLSRGVGWQGVGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGF-MIFFSVLGKFGAVFASIPAPIVAALY 398 (421)
Q Consensus 320 ~~~~r~l~~~Gl~~i~sgl~G~~~~t~~~~~n~g~i~~tg~~sr~~~~~a~~~-ll~l~~~p~~~~l~~~IP~avlggvl 398 (421)
-+.|||+++-|++|+++++|++.|+|... .+..+...+|++++.++++.++. ++.+.+. ..++..+|.++++++.
T Consensus 359 vd~nqELiAlG~~Ni~sSff~~~p~tgs~-sRSav~~~sG~~T~~s~i~~~~~vl~~l~~l---~p~f~~iP~~vLaaII 434 (665)
T KOG0236|consen 359 VDSNQELIALGISNILSSFFGCYPTTGSF-SRSAVNIKSGGRTQVAGIVSAALVLLALLFL---GPLFYYIPKCVLAAII 434 (665)
T ss_pred eCCChHHHHHHHHHHhhhhhceEcccchh-hHHHHHhhcCCcchHHHHHHHHHHHHHHHHH---HHHhhhhhHHHHHHHH
Confidence 68899999999999999999999999888 67788888999999997766654 3444443 3499999999999985
Q ss_pred HH
Q 014618 399 CL 400 (421)
Q Consensus 399 l~ 400 (421)
+.
T Consensus 435 i~ 436 (665)
T KOG0236|consen 435 IS 436 (665)
T ss_pred HH
Confidence 54
No 18
>TIGR00834 ae anion exchange protein. They preferentially catalyze anion exchange (antiport) reactions, typically acting as HCO3-:Cl- antiporters, but also transporting a range of other inorganic and organic anions. Additionally, renal Na+:HCO3- cotransporters have been found to be members of the AE family. They catalyze the reabsorption of HCO3- in the renal proximal tubule.
Probab=98.66 E-value=2.2e-05 Score=86.41 Aligned_cols=315 Identities=13% Similarity=0.101 Sum_probs=166.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCccee-eecccchHHH---HHHHHHhcccCCCCCCChhhhhhhHHH-HHHHHHHHHHH
Q 014618 72 KVIQTLLFVAGLNTLLQSLFGTRLPAV-MGGSYTFVPS---TISIILAGRFSNYSGDPVEKFKRTMRA-IQGSLIVASTL 146 (421)
Q Consensus 72 ~~i~a~~~~~gi~tllq~~~G~rlPiv-~gps~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~ga~lv~Gll 146 (421)
.-+.=++++++++.++.+++ +..|+. +|.+...+.. ..-....++. .+-. -.=..+++.++
T Consensus 401 ~gv~E~Llstai~Giifslf-~GQPL~IlG~TGPilvF~~~ly~~c~~~~~-------------~yl~~~~WigiW~~~~ 466 (900)
T TIGR00834 401 MGVSELLISTAVQGVLFALL-AAQPLLVVGFSGPLLVFEEAFFSFCESNGL-------------EYLVGRVWIGLWLVLL 466 (900)
T ss_pred chHHHHHHHHHHHHHHHhhh-cCCceEEecCcccHHHHHHHHHHHHhhcCC-------------chHHHHHHHHHHHHHH
Confidence 34567899999999999998 567765 4555433222 2222222221 1111 11235678888
Q ss_pred HHHHHhhhhhhhhhhccCccchHHHHHHHHhHhhhhhcCCc---------------------------------------
Q 014618 147 QIVLGFSGLWRNVTRFLSPLSVVPLISLVGFGLYEFGFPGV--------------------------------------- 187 (421)
Q Consensus 147 ~~llg~~gl~~~l~~~iPp~V~g~~l~~IGl~l~~~~~~~~--------------------------------------- 187 (421)
.++++.+.. ..++|+++...--.|-++|++..+..+++.+
T Consensus 467 ~~lla~~~~-s~lvryiTRFTeEiFa~lIs~IFI~eai~~L~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (900)
T TIGR00834 467 VLLLVATEG-SFLVRYISRFTQEIFSFLISLIFIYETFSKLIKIFQEHPLQVFYNTLFCVPPKPQGPSVSALLEKDCSKL 545 (900)
T ss_pred HHHHHHHhH-HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccccccccccccccccccccccccc
Confidence 888998887 7888998875544444444443333222100
Q ss_pred ---------cchhhchHHHHHH---HHHHHHHhhhhhh------ccccchhhHHHHHHHHHHHHHHHHHhhcCCCCCCCc
Q 014618 188 ---------AKCVEIGLPQLVI---IVFISQYLPHVIK------RGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAP 249 (421)
Q Consensus 188 ---------~~~~~v~~~~l~~---~~~l~~~~~~~~~------~~~~~~~~~aiLigiv~g~~~a~~~g~~~~~~~~~~ 249 (421)
...+..++..+++ ++.+..+.|++-+ +.|+.+.=+++.+++++-+.+.+.++.... ..-+
T Consensus 546 ~~~~~~~~c~~~~~~~llsliL~lgTf~~a~~L~~fk~s~yf~~~vR~~isDfgv~iaI~~~t~v~~~~~~v~~--~kl~ 623 (900)
T TIGR00834 546 GGTLGGNNCRFQPNTALLSLVLMLGTFFLAMFLRKFKNSRYFPGKARRLIGDFGVPISILIMVLVDIFIGDTYT--QKLS 623 (900)
T ss_pred ccccccccccccchHHHHHHHHHHHHHHHHHHHHHhCCCCcCCchhhhhhhhhhHHHHHHHHHHHHHHhccCcc--cccC
Confidence 0001222222222 3333334444311 123445556899999998888876652210 0000
Q ss_pred ccccccccCccCcC-CCCCceecCCCCCcCCCccc-HHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCccCCccee
Q 014618 250 KTQASCRTDRAGLI-DAAPWIRVPWPFQWGAPSFD-AGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVG 327 (421)
Q Consensus 250 ~~~~~~~~~~~~~i-~~~~~~~~P~~~~~~~p~f~-~~~i~~~~~~~lv~~~es~g~~~a~~~~~~~~~~~~~~~~r~l~ 327 (421)
..-.+...- ..-+|+--|.......|.+. +.++++.+.+++.-++|+--+..-+++.. .+-++....+=.+.
T Consensus 624 -----Vp~~f~pt~p~~R~W~i~p~~~~~~~p~w~~~~A~iPAlll~ILiFmD~nIts~iv~~~e-~kLkKgsgyH~Dll 697 (900)
T TIGR00834 624 -----VPSGLKVTNPSARGWFIPPLGENRPFPWWMMFAAALPALLVFILIFMEQQITTLIVSKKE-RKLKKGSGFHLDLL 697 (900)
T ss_pred -----CCCCcCCCCCCCCCeEEccccccccccHHHHHHHHHHHHHHHHHHHHHhhhHHHHhcCcc-ccCCCCcccchHHH
Confidence 000111100 01355532210000012221 34455566788888888665544444322 12223344566788
Q ss_pred hhhhHHHHhhhcCCCCCCcccccchhhhh-hc---------------cCC-chhHHHHHHHHH-HHHHhhhHHHHHHhhC
Q 014618 328 WQGVGILLSGLFGTVNGTSVSVENAGLLA-LT---------------RVG-SRRVVQISAGFM-IFFSVLGKFGAVFASI 389 (421)
Q Consensus 328 ~~Gl~~i~sgl~G~~~~t~~~~~n~g~i~-~t---------------g~~-sr~~~~~a~~~l-l~l~~~p~~~~l~~~I 389 (421)
.-|+-+.++|++|-...++...+|.-... .+ +++ .|.+.+..+++. +.+.+.| ++..|
T Consensus 698 llg~~~~v~sllGLPw~~aatv~S~~Hv~sL~v~~~~~~~Ge~~~i~~V~EQRvT~ll~~lLiglsv~~~P----vL~~I 773 (900)
T TIGR00834 698 LVVGMGGVAALFGLPWLSAATVRSVTHANALTVMSKASAPGEKAQIQEVREQRVTGLLVAVLVGLSILMEP----ILKRI 773 (900)
T ss_pred HHHHHHHHHHhcCCCcccccCCcChhhHhHHeeeeeccCCCCCCccceeEeeehHHHHHHHHHHHHHHHHH----HHhhc
Confidence 89999999999998766655322221111 01 111 266666666543 2333335 89999
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhH
Q 014618 390 PAPIVAALYCLFFAYVLEVLASFSS 414 (421)
Q Consensus 390 P~avlggvll~~~g~i~~~gi~~i~ 414 (421)
|.+|+.|+.+| .|.-...|.+..+
T Consensus 774 P~aVL~GvFlY-MGv~SL~GnQ~~~ 797 (900)
T TIGR00834 774 PLAVLFGIFLY-MGVTSLSGIQLFD 797 (900)
T ss_pred cHHHHHHHHHH-HHHhhcccCHHHH
Confidence 99999999988 4777777777654
No 19
>KOG1172 consensus Na+-independent Cl/HCO3 exchanger AE1 and related transporters (SLC4 family) [Inorganic ion transport and metabolism]
Probab=98.36 E-value=0.00015 Score=78.44 Aligned_cols=357 Identities=12% Similarity=0.114 Sum_probs=179.7
Q ss_pred cCCCCC-hHHHHHHH-----HHHHHHHhcceehhhhHhhhhcCCChHHHHHHHHHHHHHHHHHHHHHHHhCCCcceeeec
Q 014618 28 ITSPPP-WPEAILLG-----FQHYIVMLGTTVLIPTSLVPQMGGGNEEKAKVIQTLLFVAGLNTLLQSLFGTRLPAVMGG 101 (421)
Q Consensus 28 ~~~~~~-~~~~~~~G-----lq~~l~m~~~~v~~p~il~~a~gl~~~~~~~~i~a~~~~~gi~tllq~~~G~rlPiv~gp 101 (421)
+++|.| .+.....| +...+.++.+++.+.+.-+..++- ..+-..-+.=+++++.++.++.+++|..--.++|.
T Consensus 343 ikrR~p~Y~SD~~Da~~~~~la~~lfiYfa~l~P~ItFG~ll~~-~Tdg~~~v~E~L~stal~GiifslfggQPLlIlg~ 421 (876)
T KOG1172|consen 343 IKRRLPHYKSDFRDAFNIQCLAATLFIYFACLLPAITFGGLLGE-ATDGLIGVVETLLSTALCGIIFSLFGGQPLLILGV 421 (876)
T ss_pred HHhhcCCChHHHHHHhccccchHHHHHHHHhhhhHhhHHHHhhh-hccchHHHHHHHHHHHHHHHHHHHhcCCceEEEec
Confidence 455555 33333333 344555555554333332221111 11223445678999999999999996444445666
Q ss_pred ccchHHH---HHHHHHhcccCCCCCCChhhhhhhHHH-HHHHHHHHHHHHHHHHhhhhhhhhhhccCccchHHHHHHHHh
Q 014618 102 SYTFVPS---TISIILAGRFSNYSGDPVEKFKRTMRA-IQGSLIVASTLQIVLGFSGLWRNVTRFLSPLSVVPLISLVGF 177 (421)
Q Consensus 102 s~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~ga~lv~Gll~~llg~~gl~~~l~~~iPp~V~g~~l~~IGl 177 (421)
+...+.. .......++. .+-+ -.=..+++.++.++++.+.. ..++++++..---.|-++|.+
T Consensus 422 TgP~lVfe~~lf~f~~~~~~-------------dyl~~r~wVglW~~~l~illaa~~a-s~lv~~~TRfteEiF~~LIs~ 487 (876)
T KOG1172|consen 422 TGPLLVFEKALFKFCKDNGL-------------DYLAFRAWVGLWTAFLLILLAATNA-SSLVKYITRFTEEIFGLLISL 487 (876)
T ss_pred CccHHHHHHHHHHHHhhCCC-------------chhhHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHhHHHHHHHHHHH
Confidence 5433221 1222222221 1111 12235677888888888887 888888886433333333333
Q ss_pred HhhhhhcC--------------------------Ccc-------------chhhchHHHHHHHHHHHHHhhhhhh-----
Q 014618 178 GLYEFGFP--------------------------GVA-------------KCVEIGLPQLVIIVFISQYLPHVIK----- 213 (421)
Q Consensus 178 ~l~~~~~~--------------------------~~~-------------~~~~v~~~~l~~~~~l~~~~~~~~~----- 213 (421)
..+..+++ ... ++..++++..+.++.+..+.|++.+
T Consensus 488 iFi~eai~kl~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~llslil~~gt~~~a~~lr~fr~s~yf~ 567 (876)
T KOG1172|consen 488 IFIYEAIKKLIKIFKGLPIEFDSKPNPGADWSGPECESVSGTLLGSSCRPDTALLSLILMFGTLFLALTLRKFKSSRYFP 567 (876)
T ss_pred HHHHHHHHHHHHHhhcCcccccccCCcccccccccccccCcccCCCcCCcchHHHHHHHHHHHHHHHHHHHHhccCCccc
Confidence 23322221 000 0112233333334444555555422
Q ss_pred -ccccchhhHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccccccCccCcCCC-CCceecCCCCCcCCCccc-HHHHHHH
Q 014618 214 -RGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDA-APWIRVPWPFQWGAPSFD-AGEAFAM 290 (421)
Q Consensus 214 -~~~~~~~~~aiLigiv~g~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~P~~~~~~~p~f~-~~~i~~~ 290 (421)
+.|.++.=+++.+++++-+.+.+..+... .++.. -+..++..... -.|+-.|.- ..|-+. ..++++.
T Consensus 568 ~~~R~~isDfgvpisIl~~s~i~~~~~~~~-----~~kl~--vp~~~~~t~~~~rgw~v~~~~---~~P~~~~~~A~ipa 637 (876)
T KOG1172|consen 568 RKVRSLISDFGVPLSILVFSLIDYFGGSVE-----TPKLP--VPSVFPPTWPFDRGWFVPPFG---KNPWWYVFAALIPA 637 (876)
T ss_pred hHHHHHHHhhhhHHHHHHHHHHHhhccccC-----CCccc--cCcCCCCCCcccCCeeeCCCC---CCCHHHHHHHHHHH
Confidence 12334455689999999888877664211 00000 00001110011 234433310 112111 2334445
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhCCCCCCCccCCcceehhhhHHHHhhhcCCCCCCcccccchhhhhh----c--------
Q 014618 291 MMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILLSGLFGTVNGTSVSVENAGLLAL----T-------- 358 (421)
Q Consensus 291 ~~~~lv~~~es~g~~~a~~~~~~~~~~~~~~~~r~l~~~Gl~~i~sgl~G~~~~t~~~~~n~g~i~~----t-------- 358 (421)
+.+++.-++|+--+..-+++.. .+-++.....=.+..-|+-|.++|++|-...++...+|...+.. +
T Consensus 638 lll~iLiFmDqqIts~iv~rke-~kLKKgsgyH~DLlllgil~~icsllGLPw~~~a~p~S~~H~~SL~v~~~~~apge~ 716 (876)
T KOG1172|consen 638 LLLTILIFMDQQITAVIVNRKE-NKLKKGSGYHLDLLLLGILTLICSLLGLPWSNAATVQSPMHTKSLAVESETSAPGEQ 716 (876)
T ss_pred HHHHHHHHhcchHHHHHhhccc-ccCCCCcchhHHHHHHHHHHHHHHhcCCCccccccccCHHHHHHHHHhhcccCCCCc
Confidence 5677778887654433333322 12223334555789999999999999988776655344433221 1
Q ss_pred ----cCC-chhHHHHHHHHHHHHHhhhHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhH
Q 014618 359 ----RVG-SRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVLEVLASFSS 414 (421)
Q Consensus 359 ----g~~-sr~~~~~a~~~ll~l~~~p~~~~l~~~IP~avlggvll~~~g~i~~~gi~~i~ 414 (421)
+++ -|.++...+++..+..+ ...++..||.+|+.|+.+|+ |+=...|.|..+
T Consensus 717 ~~i~~V~EQRvtgll~~llvgls~~---~~pvL~~IP~~VL~GvFlYM-gv~SL~Gnqf~e 773 (876)
T KOG1172|consen 717 PQIVGVREQRVTGLLQFLLVGLSVL---LLPVLKLIPMPVLYGVFLYM-GVSSLPGNQFFE 773 (876)
T ss_pred cccccchhhhhHHHHHHHHHHHHHH---HHHHHhhccHHHHHHHHHHH-hhccCCccHHHH
Confidence 111 15556655554432222 33489999999999998874 555555555443
No 20
>PF11840 DUF3360: Protein of unknown function (DUF3360); InterPro: IPR021794 This family of proteins are functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 489 to 517 amino acids in length.
Probab=97.70 E-value=0.0064 Score=60.18 Aligned_cols=304 Identities=15% Similarity=0.138 Sum_probs=164.2
Q ss_pred cCCChHH------HHHHHHHHHHHHHHHHHHHHHhCCCcceeeecccchHHHHHHHHHhcccCCCCCCChhhhhhhHHHH
Q 014618 63 MGGGNEE------KAKVIQTLLFVAGLNTLLQSLFGTRLPAVMGGSYTFVPSTISIILAGRFSNYSGDPVEKFKRTMRAI 136 (421)
Q Consensus 63 ~gl~~~~------~~~~i~a~~~~~gi~tllq~~~G~rlPiv~gps~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 136 (421)
+|++++- ...++.+.+|+.-+++++.- .+|++--.||-...++. ++.+ | +-+.+
T Consensus 87 lgL~~~Fv~envR~EllI~a~lFvil~Sgfl~P--~anLAGthgPmIpLIp~---ivaa-G--------------gHPLa 146 (492)
T PF11840_consen 87 LGLSPEFVIENVRYELLIAALLFVILFSGFLNP--RANLAGTHGPMIPLIPL---IVAA-G--------------GHPLA 146 (492)
T ss_pred cCCChhHhhhhhhhhhhHHHHHHHHHHHhccCc--cccccCCCCCcchhhHH---HHHc-C--------------CCcHH
Confidence 6777542 12345555555555555443 47888778886555553 2322 2 11223
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhccCccchHHHHHHHHhHhhhhhcC----Ccc--chhhchHHHHHHHHHHHHHhhh
Q 014618 137 QGSLIVASTLQIVLGFSGLWRNVTRFLSPLSVVPLISLVGFGLYEFGFP----GVA--KCVEIGLPQLVIIVFISQYLPH 210 (421)
Q Consensus 137 ~ga~lv~Gll~~llg~~gl~~~l~~~iPp~V~g~~l~~IGl~l~~~~~~----~~~--~~~~v~~~~l~~~~~l~~~~~~ 210 (421)
+ -++-|++-++++.+|.-+|+.+.=..-|.|..+..+|+.=.-.+++ +.. +...++++.+...+++..|+.|
T Consensus 147 l--gilvg~fGlil~~~kggS~L~~LTs~gv~ggLllylG~~G~~~qi~kl~~wa~~~~~~~i~fvvi~~tiv~Ya~L~k 224 (492)
T PF11840_consen 147 L--GILVGVFGLILSIFKGGSKLVNLTSHGVCGGLLLYLGFVGLIGQIKKLFAWANGFDMGYIAFVVIIVTIVLYAYLAK 224 (492)
T ss_pred H--HHHHHHHHHHHHHhcchhHHHhhhcCccccceeeeehhhhHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHHHHHH
Confidence 3 3566888899999988889999888888887665555521111111 111 1334556656565566555555
Q ss_pred hhhccccchhhHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccccccCccCcCCCCC------ceecCCCCCcCCCcccH
Q 014618 211 VIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDAAP------WIRVPWPFQWGAPSFDA 284 (421)
Q Consensus 211 ~~~~~~~~~~~~aiLigiv~g~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~------~~~~P~~~~~~~p~f~~ 284 (421)
+ .|| ..++-++-+++-++++.+|.. .||.. -...| |..-..-++.++|+++
T Consensus 225 ~---~Kr---WLaIPl~~~~a~~~a~~lGa~---------------f~f~t-~pglp~lnP~YWWge~tGw~LglP~~~- 281 (492)
T PF11840_consen 225 I---EKR---WLAIPLCSILAGVLAFALGAP---------------FEFTT-EPGLPNLNPMYWWGEETGWQLGLPTLE- 281 (492)
T ss_pred h---ccc---hhhhhHHHHHHHHHHHHcCCC---------------ceeec-CCCCCCCCCcccccCCcccccCCCcHH-
Confidence 4 233 345555555566667777752 12211 00011 1111112245566543
Q ss_pred HHHHHHHHHHHHHH----HHHHHHHHHHHhhhCCCCC---CCccCCcceehhhhHHHHhhhcCCCCCCcccccchhhhhh
Q 014618 285 GEAFAMMMASFVAL----VESTGAFFAVARYASATPM---PPSVLSRGVGWQGVGILLSGLFGTVNGTSVSVENAGLLAL 357 (421)
Q Consensus 285 ~~i~~~~~~~lv~~----~es~g~~~a~~~~~~~~~~---~~~~~~r~l~~~Gl~~i~sgl~G~~~~t~~~~~n~g~i~~ 357 (421)
-.+..+++++... -|.+|+- ..++.+ ++++ ..-++|..+....+=+++++.+|+-..+++- .+-=+.+.
T Consensus 282 -hfiav~PFAiLAVaMWSpDflghr-vFqeln-ypk~~~kvlMnvDDTm~~~siRQ~vGs~lGGgN~~SsW-gTymIPaa 357 (492)
T PF11840_consen 282 -HFIAVLPFAILAVAMWSPDFLGHR-VFQELN-YPKETKKVLMNVDDTMTMCSIRQIVGSILGGGNIASSW-GTYMIPAA 357 (492)
T ss_pred -HHHHhccHHHHHHHHhCchHHHHH-HHHHhc-CchhhcceeecccchhHHHHHHHHHhhcccCCcccccc-hhhhhhHH
Confidence 3344444444332 3666643 233333 2221 2247899999999999999999987654333 12111111
Q ss_pred -ccCCchhHHHHHHHHHHHHHhhhHHHHHHhhCChHHHHHHHHH-HHHHHHHHHHHHhHhcC
Q 014618 358 -TRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCL-FFAYVLEVLASFSSVTS 417 (421)
Q Consensus 358 -tg~~sr~~~~~a~~~ll~l~~~p~~~~l~~~IP~avlggvll~-~~g~i~~~gi~~i~~~d 417 (421)
.++-=+-..+..+++|++.+...-=. =++.- .||+--++++ +|=-+.-+|+++.+..+
T Consensus 358 IaKRPIpggAiLtg~~Ci~~av~GyPM-dlavw-~Pvl~vALlvGVflPLleAGmqm~r~~k 417 (492)
T PF11840_consen 358 IAKRPIPGGAILTGLLCIVAAVWGYPM-DLAVW-PPVLRVALLVGVFLPLLEAGMQMTRKGK 417 (492)
T ss_pred HhcCCCCchHHHHHHHHHHHHHhcCcc-hhhhc-ccHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 22222334678899998888763000 12233 3566666554 66677889999887664
No 21
>PF00955 HCO3_cotransp: HCO3- transporter family Only partial structure; InterPro: IPR011531 Bicarbonate (HCO3 -) transport mechanisms are the principal regulators of pH in animal cells. Such transport also plays a vital role in acid-base movements in the stomach, pancreas, intestine, kidney, reproductive organs and the central nervous system. Functional studies have suggested four different HCO3 - transport modes. Anion exchanger proteins exchange HCO3 - for Cl- in a reversible, electroneutral manner []. Na+/HCO3 - co-transport proteins mediate the coupled movement of Na+ and HCO3 - across plasma membranes, often in an electrogenic manner []. Na- driven Cl-/HCO3 - exchange and K+/HCO3 - exchange activities have also been detected in certain cell types, although the molecular identities of the proteins responsible remain to be determined. Sequence analysis of the two families of HCO3 - transporters that have been cloned to date (the anion exchangers and Na+/HCO3 - co-transporters) reveals that they are homologous. This is not entirely unexpected, given that they both transport HCO3 - and are inhibited by a class of pharmacological agents called disulphonic stilbenes []. They share around ~25-30% sequence identity, which is distributed along their entire sequence length, and have similar predicted membrane topologies, suggesting they have ~10 transmembrane (TM) domains. This domain is found at the C terminus of many bicarbonate transport proteins. It is also found in some plant proteins responsible for boron transport []. In these proteins it covers almost the entire length of the sequence.; GO: 0006820 anion transport, 0016021 integral to membrane; PDB: 1BH7_A 1BTT_A 1BZK_A 1BTQ_A 1BTR_A 1BNX_A 1BTS_A.
Probab=97.17 E-value=0.00025 Score=74.09 Aligned_cols=184 Identities=14% Similarity=0.147 Sum_probs=1.5
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccccccCccCcCCC-CCceecCCCCCcCCCccc-HHHHHHHHHH
Q 014618 216 KNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDA-APWIRVPWPFQWGAPSFD-AGEAFAMMMA 293 (421)
Q Consensus 216 ~~~~~~~aiLigiv~g~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~P~~~~~~~p~f~-~~~i~~~~~~ 293 (421)
|+.+.-+++.+++++-+.+....+. .. ++- .-..+++....+ -+|+--|. ...|.+. ..++++.+.+
T Consensus 277 R~~isDf~v~iaI~~~~~~~~~~~~-~~-----~kL--~vp~~f~pt~~~~r~W~v~p~---~~~p~w~~~aA~~palll 345 (510)
T PF00955_consen 277 REIISDFGVPIAILIMTLVDYLFGV-DT-----PKL--NVPSSFKPTSPGKRGWFVNPF---GSLPWWAIFAAIIPALLL 345 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHhHHhhHHHHHHHHHHHHHHHhcc-cc-----ccc--CCCCCCCCCCCCCCCeecCcc---cCCCHHHHHHHHHHHHHH
Confidence 4455566889999988887765542 10 000 000012110111 34543221 0122222 2334444566
Q ss_pred HHHHHHHHHHHHHHHHhhhCCCCCCCccCCcceehhhhHHHHhhhcCCCCCCcccccchhhhh------h----------
Q 014618 294 SFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILLSGLFGTVNGTSVSVENAGLLA------L---------- 357 (421)
Q Consensus 294 ~lv~~~es~g~~~a~~~~~~~~~~~~~~~~r~l~~~Gl~~i~sgl~G~~~~t~~~~~n~g~i~------~---------- 357 (421)
++.-++|+--+..-+++.. .+-++.....=.+..-|+-|.++|++|-...++...+|...+. .
T Consensus 346 ~iL~F~DqnIts~ivn~~e-~kLkKg~gyH~DL~llgi~~~v~sllGLPw~~aa~~~S~~Hv~sL~~~~~~~~pGe~~~i 424 (510)
T PF00955_consen 346 TILFFMDQNITSLIVNRPE-NKLKKGSGYHLDLFLLGIITLVCSLLGLPWMNAATPQSPMHVRSLAVESETSAPGEKPKI 424 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHhHhHHHhCChh-hccCCCCcccHHHHHHHHHHHHHHHcCCCCcccCccCCHHHhCcccEEeccccCCCCCee
Confidence 7777777544333333321 1222334455578999999999999997766654322221111 1
Q ss_pred ccCC-chhHHHHHHHHHHHHHhhhHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhHh
Q 014618 358 TRVG-SRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVLEVLASFSSV 415 (421)
Q Consensus 358 tg~~-sr~~~~~a~~~ll~l~~~p~~~~l~~~IP~avlggvll~~~g~i~~~gi~~i~~ 415 (421)
.+++ .|.+.+...++. ++...+..++..||.+|+.|+.+|+ |.-...|.+.++.
T Consensus 425 ~~V~EqRvT~l~~~~Li---gls~~l~pvL~~IP~~VL~GvFlym-G~~sL~gnq~~~R 479 (510)
T PF00955_consen 425 VGVREQRVTGLLVHLLI---GLSLFLLPVLKLIPMPVLYGVFLYM-GVTSLSGNQFFER 479 (510)
T ss_dssp --------------------------------------------------------TTT
T ss_pred CeEEEecccHHHHHHHH---HHHHHHHHHHHHhhHHHHHHHHHhh-eeeeecCccHHHH
Confidence 0111 255555544432 2332344489999999999999884 6767777766554
No 22
>TIGR00815 sulP high affinity sulphate transporter 1. (2) SO42- (out) + nHCO3- (in) SO42- (in) + nHCO3- (out).
Probab=82.69 E-value=18 Score=38.87 Aligned_cols=115 Identities=12% Similarity=0.104 Sum_probs=75.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCccCCcceehhhhHHHHhhhcCCCCCCcccccch-hhhh-----hccCC
Q 014618 288 FAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILLSGLFGTVNGTSVSVENA-GLLA-----LTRVG 361 (421)
Q Consensus 288 ~~~~~~~lv~~~es~g~~~a~~~~~~~~~~~~~~~~r~l~~~Gl~~i~sgl~G~~~~t~~~~~n~-g~i~-----~tg~~ 361 (421)
+.-+..+++.+-|+++ .+..++. +..-++.+.-+..++.++||+++.......+. +.+. .-+..
T Consensus 19 ~aGltv~~~~iP~~~a----yA~lagl------pp~~GLysa~~~~iv~alfGss~~~i~Gp~a~~sl~~~~~v~~~~~~ 88 (563)
T TIGR00815 19 MAGLTVGILLIPQAMA----YAILAGL------SPIYGLYTSFVPPFIYALFGTSRDIAIGPVAVMSLLLGSVIARVGLQ 88 (563)
T ss_pred HHHHHHHHHHHHHHHH----HHHHcCC------CchhhhHHHHHHHHHhheecCCCcccCCHHHHHHHHHHHHHHHhcCC
Confidence 4445666777777664 3444453 23457999999999999999998877662221 1111 11111
Q ss_pred c----h------hHHHHHHHHHHHHHhhhHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHh
Q 014618 362 S----R------RVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVLEVLASFS 413 (421)
Q Consensus 362 s----r------~~~~~a~~~ll~l~~~p~~~~l~~~IP~avlggvll~~~g~i~~~gi~~i 413 (421)
. + ...+.+|++++++|++ +++.+...+|.+|+.|.+.-+--.++.+.++.+
T Consensus 89 ~~~~~~~~~~a~~l~~l~Gi~~~~~g~l-rlG~l~~~is~~Vi~Gf~~g~a~~i~~~Ql~~~ 149 (563)
T TIGR00815 89 YLFDCDAIRLAFTLTLLAGIFQVILGLL-RLGFLIEFLSHAVISGFMTGAAITIGLSQLKGL 149 (563)
T ss_pred CCcccHHHHHHHHHHHHHHHHHHHHHHH-hhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 1 3356778888888876 788999999999999987655445555555543
No 23
>COG0659 SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]
Probab=76.04 E-value=20 Score=38.54 Aligned_cols=114 Identities=17% Similarity=0.205 Sum_probs=73.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCccCCcceehhhhHHHHhhhcCCCCCCcccccchhhh--hhccCC---
Q 014618 287 AFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILLSGLFGTVNGTSVSVENAGLL--ALTRVG--- 361 (421)
Q Consensus 287 i~~~~~~~lv~~~es~g~~~a~~~~~~~~~~~~~~~~r~l~~~Gl~~i~sgl~G~~~~t~~~~~n~g~i--~~tg~~--- 361 (421)
++.-+.++++.+=|+++ .+..+|- +...++.+.=++.++.++||+++..... ...+.. ...-.+
T Consensus 25 l~AGltva~valP~ama----~a~~aGv------~p~~GLyas~i~~~v~alfGgs~~~i~G-Pt~a~~~v~a~~i~~~~ 93 (554)
T COG0659 25 LLAGLTVAAVALPLAMA----FAIAAGV------PPEAGLYASIVAGIIYALFGGSRGLISG-PTGAFAVVLAAVIASLV 93 (554)
T ss_pred HHHHHHHHHHHhHHHHH----HHHHcCC------CHHHHHHHHHHHHHHHHHHcCCccceec-cchhhHHHHHHHHHHHH
Confidence 34455666666666664 3445553 3467999999999999999999976554 322221 112222
Q ss_pred ch------hHHHHHHHHHHHHHhhhHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHH
Q 014618 362 SR------RVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVLEVLASF 412 (421)
Q Consensus 362 sr------~~~~~a~~~ll~l~~~p~~~~l~~~IP~avlggvll~~~g~i~~~gi~~ 412 (421)
.+ .+.+.+|++++++|++ |++.++..||.+|+-|.+--+-=.++.+.++.
T Consensus 94 ~~g~~~~~~~tllaGv~~i~~G~l-RLG~li~fip~pVl~Gf~~Giai~I~~~Ql~~ 149 (554)
T COG0659 94 ETGLALAFLATLLAGVFQILLGLL-RLGRLIRFIPRPVLIGFTAGIAILIILTQLPV 149 (554)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HhhhhhhhccHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 1245678888888876 89999999999999988654333344444443
No 24
>PF13792 Sulfate_tra_GLY: Sulfate transporter N-terminal domain with GLY motif
Probab=68.08 E-value=5.9 Score=31.30 Aligned_cols=58 Identities=21% Similarity=0.300 Sum_probs=44.6
Q ss_pred ChHHHHHHHHHHHHHHhcceehhhhHhhh--hcCCChHHHHHHHHHHHHHHHHHHHHHHHhCCCcceeeeccc
Q 014618 33 PWPEAILLGFQHYIVMLGTTVLIPTSLVP--QMGGGNEEKAKVIQTLLFVAGLNTLLQSLFGTRLPAVMGGSY 103 (421)
Q Consensus 33 ~~~~~~~~Glq~~l~m~~~~v~~p~il~~--a~gl~~~~~~~~i~a~~~~~gi~tllq~~~G~rlPiv~gps~ 103 (421)
.+++++++|++-.+... |.-++- ..|+++ ...+.++.+..++.++||.+--++.||+.
T Consensus 15 ~~~~D~~aGltva~~~i------Pq~~a~A~lAg~pp-------~~GLy~a~~~~liyalfG~s~~~~~Gp~a 74 (84)
T PF13792_consen 15 NLRGDLLAGLTVALVAI------PQGMAYALLAGVPP-------IYGLYAAIIPPLIYALFGSSRHMIVGPTA 74 (84)
T ss_pred HHHHHHHHHHHHHHHHH------HHHHHHHHHcCCCC-------CeeeHHHHHHHHHHhhccCCCccccChHH
Confidence 46899999999765544 444443 278888 47888899999999999888778889864
No 25
>PRK11660 putative transporter; Provisional
Probab=67.13 E-value=67 Score=34.57 Aligned_cols=116 Identities=11% Similarity=0.074 Sum_probs=73.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCccCCcceehhhhHHHHhhhcCCCCCCcccccch-hhhhhc-----cC
Q 014618 287 AFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILLSGLFGTVNGTSVSVENA-GLLALT-----RV 360 (421)
Q Consensus 287 i~~~~~~~lv~~~es~g~~~a~~~~~~~~~~~~~~~~r~l~~~Gl~~i~sgl~G~~~~t~~~~~n~-g~i~~t-----g~ 360 (421)
++.-+.++++..-|+++ .+..++.+ ..-++.+.-++.++-++||+++.......+. ..+..+ +.
T Consensus 33 ~iAGltv~~~~iPq~ma----yA~lag~p------p~~GLysa~~~~~vyal~Gss~~~~~Gp~a~~~~~~~~~~~~~~~ 102 (568)
T PRK11660 33 LIAGITVGIIAIPLAMA----LAIASGVP------PQYGLYTAAVAGIVIALTGGSRFSVSGPTAAFVVILYPVSQQFGL 102 (568)
T ss_pred HHHHHHHHHHHHHHHHH----HHHHcCCC------hHHHHHHHHHHHHHHHHhcCCCCcccChhHHHHHHHHHHHHHhhH
Confidence 34456677777777775 34455532 2237999999999999999999876662222 111111 11
Q ss_pred C-chhHHHHHHHHHHHHHhhhHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHh
Q 014618 361 G-SRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVLEVLASFS 413 (421)
Q Consensus 361 ~-sr~~~~~a~~~ll~l~~~p~~~~l~~~IP~avlggvll~~~g~i~~~gi~~i 413 (421)
. .-...+.+|+++++++++ +++.+...||.+|+.|.+.-+-=.++.++++.+
T Consensus 103 ~~~~~~~~l~Gii~~l~gll-rlG~l~~fip~pVi~Gf~~g~al~I~~~Ql~~~ 155 (568)
T PRK11660 103 AGLLVATLMSGIILILMGLA-RLGRLIEYIPLSVTLGFTSGIGIVIATLQIKDF 155 (568)
T ss_pred HHHHHHHHHHHHHHHHHHHH-hhhHHHhcCcHHHHHHHHHHHHHHHHHHHHHHh
Confidence 0 012245778888888876 578899999999999886543223444444443
No 26
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=62.85 E-value=76 Score=33.82 Aligned_cols=129 Identities=17% Similarity=0.135 Sum_probs=70.9
Q ss_pred CCCCChHHHHHHHHHHHHHHhcceehhhhHhhhhcCCChHHHHHHHHHHHHHHHHHHHHHHHhCCCccee--eecccchH
Q 014618 29 TSPPPWPEAILLGFQHYIVMLGTTVLIPTSLVPQMGGGNEEKAKVIQTLLFVAGLNTLLQSLFGTRLPAV--MGGSYTFV 106 (421)
Q Consensus 29 ~~~~~~~~~~~~Glq~~l~m~~~~v~~p~il~~a~gl~~~~~~~~i~a~~~~~gi~tllq~~~G~rlPiv--~gps~~~~ 106 (421)
.+++..+..+..+.-..+.........|++..+..|.++.....+..+.-+.+-+++++...+..|++.- +.-+....
T Consensus 215 ~~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~ 294 (524)
T PF05977_consen 215 RSSPPLRSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLF 294 (524)
T ss_pred hcchHHHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHH
Confidence 3445566555555544444333344568887777899888777777777777777888777654443321 11111111
Q ss_pred HHHHHHHHhcccCCCCCCChhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCccchHHHH
Q 014618 107 PSTISIILAGRFSNYSGDPVEKFKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFLSPLSVVPLI 172 (421)
Q Consensus 107 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ga~lv~Gll~~llg~~gl~~~l~~~iPp~V~g~~l 172 (421)
+..... .+.. .....+..+.++.|......-. .....+.+..|+.+.|=+.
T Consensus 295 a~~~~~---lal~-----------~~~~~~~~~l~l~G~~~~~~~~-~~~t~~Q~~~P~~~~GRv~ 345 (524)
T PF05977_consen 295 ALALLL---LALS-----------PSFWLALIALFLAGAAWIIANS-SLNTLVQLSVPDWVRGRVF 345 (524)
T ss_pred HHHHHH---Hhcc-----------hHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCCHHHHhHHH
Confidence 111111 1110 1233455667777776655432 2335678888888766543
No 27
>TIGR03173 pbuX xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696, ) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.
Probab=61.13 E-value=70 Score=32.71 Aligned_cols=75 Identities=15% Similarity=0.221 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHHHHHHHhCCCcceeeecccchHHHHHHHHHhcccCCCCCCChhhhhhhHHHHHHHHHHHHHHHHHHHhh
Q 014618 74 IQTLLFVAGLNTLLQSLFGTRLPAVMGGSYTFVPSTISIILAGRFSNYSGDPVEKFKRTMRAIQGSLIVASTLQIVLGFS 153 (421)
Q Consensus 74 i~a~~~~~gi~tllq~~~G~rlPiv~gps~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ga~lv~Gll~~llg~~ 153 (421)
+...+.+-|+++++-+++| ..|.. ++ .-. .......+.. ..+ +..++|++.++++++
T Consensus 255 ~~~~l~~~Gi~~i~aglfG-~~p~t---~~--~~~-~~~~~~tg~~-----------sr~-----~~~~~~~~lil~~l~ 311 (406)
T TIGR03173 255 LAGGLRADGLGSALGGLFN-TFPYT---SF--SQN-VGLVQLTGVK-----------SRY-----VVAAAGVILVLLGLF 311 (406)
T ss_pred ccchHHhccHHHHHHHHhC-CCCCc---ch--hhh-HHHHHHhCCC-----------chH-----hHHHHHHHHHHHHHH
Confidence 4688899999999999987 57753 11 111 0111111110 112 247788888888887
Q ss_pred hhhhhhhhccCccchHHH
Q 014618 154 GLWRNVTRFLSPLSVVPL 171 (421)
Q Consensus 154 gl~~~l~~~iPp~V~g~~ 171 (421)
+....+.+.+|..+.|..
T Consensus 312 ~~~~~l~~~iP~~vlgg~ 329 (406)
T TIGR03173 312 PKLAALVASIPQPVLGGA 329 (406)
T ss_pred HHHHHHHHhCCHHHHHHH
Confidence 666999999998888774
No 28
>PF03594 BenE: Benzoate membrane transport protein; InterPro: IPR004711 The benzoate:H+ symporter (BenE) family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter [, ]. Proteins in this family are about 400 residues in length and probably span the membrane 12 times. They exhibit about 30% identity to each other and limited sequence similarity to members of the aromatic acid:H+symporter (AAHS) family of the major facilitator superfamily (MFS). However the degree of similarity with the latter proteins is insufficient to establish homology. Thus, in spite of the sequence similarity and their similar substrate specificities, the BenE family must be considered separately. This family is classified as TC number 2.A.46 under the transporter classification (TC) system [].; GO: 0016021 integral to membrane
Probab=57.08 E-value=79 Score=32.15 Aligned_cols=127 Identities=20% Similarity=0.235 Sum_probs=72.4
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCccCCc----ceehhhhHHHHhhhcCCCCCCcccccchhh--
Q 014618 281 SFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSR----GVGWQGVGILLSGLFGTVNGTSVSVENAGL-- 354 (421)
Q Consensus 281 ~f~~~~i~~~~~~~lv~~~es~g~~~a~~~~~~~~~~~~~~~~r----~l~~~Gl~~i~sgl~G~~~~t~~~~~n~g~-- 354 (421)
+++++.+..-+.-.++....+..-+....+..+.. +.+... -..+.|+.++.-++-==.|..+.- +..|.
T Consensus 2 d~~~s~~~aG~va~lvg~tg~~aiv~qaa~a~g~s---~~q~~SWl~al~~~~Gl~~i~lSl~yR~Pi~~AW-StPGaAl 77 (378)
T PF03594_consen 2 DFSLSAVSAGFVAVLVGYTGPVAIVLQAAQAAGAS---PAQIASWLFALYLGMGLTSILLSLRYRMPIVTAW-STPGAAL 77 (378)
T ss_pred CCcHHHHHHHHHHHHhhccchHHHHHHHHHHcCCC---HHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhhc-chHHHHH
Confidence 34555555555555666655555555555554432 223333 345556666666665555555444 22222
Q ss_pred hhhcc-CCc--hh--HHHHHHHHHHHHHhhhHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhH
Q 014618 355 LALTR-VGS--RR--VVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVLEVLASFSS 414 (421)
Q Consensus 355 i~~tg-~~s--r~--~~~~a~~~ll~l~~~p~~~~l~~~IP~avlggvll~~~g~i~~~gi~~i~ 414 (421)
...+. ..+ .. +.+.++++.+++|+.+.+..++..||.++..+++ -|.+.--+++.++
T Consensus 78 L~~~~~~~~~~eavGAfl~~~~Li~l~G~tg~~~rl~~~IP~~ia~AML---AGvLl~f~l~~f~ 139 (378)
T PF03594_consen 78 LATSLPGYSFAEAVGAFLVAGALILLLGVTGLFGRLMRRIPPPIASAML---AGVLLPFGLAAFT 139 (378)
T ss_pred HHHhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH---HHHHHHHHHHHHH
Confidence 22111 111 11 2467888889999999999999999999887763 3555555555443
No 29
>PRK11412 putative uracil/xanthine transporter; Provisional
Probab=55.79 E-value=71 Score=33.23 Aligned_cols=76 Identities=12% Similarity=0.031 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCcceeeecccchHHHHHHHHHhcccCCCCCCChhhhhhhHHHHHHHHHHHHHHHHHHHh
Q 014618 73 VIQTLLFVAGLNTLLQSLFGTRLPAVMGGSYTFVPSTISIILAGRFSNYSGDPVEKFKRTMRAIQGSLIVASTLQIVLGF 152 (421)
Q Consensus 73 ~i~a~~~~~gi~tllq~~~G~rlPiv~gps~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ga~lv~Gll~~llg~ 152 (421)
-+.+++..-|++|++-+++| ..|..-=+...-+ +...+.. -.+ .+..+|++.+++|+
T Consensus 276 ~l~rgi~~dGi~s~laglfg-~~p~tt~sqNvGv------i~~TgV~-----------SR~-----v~~~aa~ilillgl 332 (433)
T PRK11412 276 RYRRSFVATGFMTLITVPLA-VIPFSPFVSSIGL------LTQTGDY-----------RRR-----SFIYGSVMCLLVAL 332 (433)
T ss_pred ccccchhhccHHHHHHHhcC-CCCCCchhhhhhh------hhhcCCc-----------hhH-----HHHHHHHHHHHHHH
Confidence 45788999999999999886 5665211111111 1111110 012 36678899999999
Q ss_pred hhhhhhhhhccCccchHHH
Q 014618 153 SGLWRNVTRFLSPLSVVPL 171 (421)
Q Consensus 153 ~gl~~~l~~~iPp~V~g~~ 171 (421)
++-+..+...+|..|.|..
T Consensus 333 ~PK~~alia~IP~pVlGg~ 351 (433)
T PRK11412 333 IPALTRLFCSIPLPVSSAV 351 (433)
T ss_pred HHHHHHHHHhCCHHHHHHH
Confidence 8777999999998888765
No 30
>TIGR00843 benE benzoate transporter. The benzoate transporter family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter.
Probab=48.29 E-value=1.1e+02 Score=31.53 Aligned_cols=115 Identities=17% Similarity=0.119 Sum_probs=69.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCC-CccCCcceehhhhHHHHhhhcCCCCCCccccc-chhhhhh-ccC
Q 014618 284 AGEAFAMMMASFVALVESTGAFFAVARYASATPMP-PSVLSRGVGWQGVGILLSGLFGTVNGTSVSVE-NAGLLAL-TRV 360 (421)
Q Consensus 284 ~~~i~~~~~~~lv~~~es~g~~~a~~~~~~~~~~~-~~~~~r~l~~~Gl~~i~sgl~G~~~~t~~~~~-n~g~i~~-tg~ 360 (421)
.+.+..-+.-.++....+..-+....+..+..+.+ ..-+.--.++.|+++++-++.==.|.....|. -...+.. ...
T Consensus 21 ~s~~~aG~va~lvg~~~~~~iv~~a~~~~g~s~aq~~swl~a~~~~~Gl~ti~lS~~~r~Pi~~awStPGaAll~~~~~~ 100 (395)
T TIGR00843 21 PPTLIAGFLAVLIGYAGPAAIFFQAAIKAGASTAMIIGWITAIGIAAAVSGIFLSIRFKTPVLTAWSAPGAALLVTGFPG 100 (395)
T ss_pred hHHHHHHHHHHHHhccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeecCchHHHHHHHhcCC
Confidence 34455555556666666666555555555532111 12244566777888887777666776655421 1222221 111
Q ss_pred Cch-h---HHHHHHHHHHHHHhhhHHHHHHhhCChHHHHHHH
Q 014618 361 GSR-R---VVQISAGFMIFFSVLGKFGAVFASIPAPIVAALY 398 (421)
Q Consensus 361 ~sr-~---~~~~a~~~ll~l~~~p~~~~l~~~IP~avlggvl 398 (421)
.+. - +.++++++++++|+.+.+..+...||.++.++++
T Consensus 101 ~~~~eavGAfiv~g~lilllGltG~f~rl~~~IP~~Va~amL 142 (395)
T TIGR00843 101 ISLNEAIAAFITAAALIFLCGITGLFAKLLKIIPHGIAAAML 142 (395)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
Confidence 121 1 3567788888899999999999999999999885
No 31
>TIGR00801 ncs2 uracil-xanthine permease. NCS2 family appears to be distantly related to the NCS1 family (TC #2.A.39).
Probab=47.99 E-value=62 Score=33.31 Aligned_cols=76 Identities=22% Similarity=0.346 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHHHHHHhCCCcceeeecccchHHHHHHHHHhcccCCCCCCChhhhhhhHHHHHHHHHHHHHHHHHHHhh
Q 014618 74 IQTLLFVAGLNTLLQSLFGTRLPAVMGGSYTFVPSTISIILAGRFSNYSGDPVEKFKRTMRAIQGSLIVASTLQIVLGFS 153 (421)
Q Consensus 74 i~a~~~~~gi~tllq~~~G~rlPiv~gps~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ga~lv~Gll~~llg~~ 153 (421)
+...+++-|+++++-+++| ..|..- + .- ...+....+.. ..+ ....+|++.++++++
T Consensus 271 ~~r~l~adGl~~i~aglfG-~~p~t~---~--se-n~g~~~~T~~~-----------sr~-----~~~~~a~~~i~~~l~ 327 (415)
T TIGR00801 271 LHRGVLADGLATLLAGLFG-GFPNTT---F--AQ-NIGVIALTRVA-----------SRW-----VIVGAAVILIALGFF 327 (415)
T ss_pred ccchHHHhhHHHHHHHhcC-CCCCcc---h--hh-hheeeeecCCC-----------chH-----HHHHHHHHHHHHHHH
Confidence 4688899999999999987 477621 1 10 00111111100 011 567888889999988
Q ss_pred hhhhhhhhccCccchHHHH
Q 014618 154 GLWRNVTRFLSPLSVVPLI 172 (421)
Q Consensus 154 gl~~~l~~~iPp~V~g~~l 172 (421)
.-+..+.+.+|..|.|...
T Consensus 328 pk~~~l~~~iP~~vlgg~~ 346 (415)
T TIGR00801 328 PKIAALITSIPSPVLGGAS 346 (415)
T ss_pred HHHHHHHHhCCHHHHHHHH
Confidence 6679999999988877654
No 32
>PHA03255 BDLF3; Provisional
Probab=45.30 E-value=34 Score=30.52 Aligned_cols=38 Identities=26% Similarity=0.530 Sum_probs=30.5
Q ss_pred CCCCCCCCCCCCCCCCCCCcccccCCCCChHHHHHHHHHHHH
Q 014618 5 AAPKADEPLPHPAKDQLPSISYCITSPPPWPEAILLGFQHYI 46 (421)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Glq~~l 46 (421)
++.|.+..+|.||.||.++..|++ |++..++-|++..+
T Consensus 159 ~~~~ttaelpt~pdekqps~~~gl----plwtlvfvgltflm 196 (234)
T PHA03255 159 NATKTTAELPTVPDERQPSLSYGL----PLWTLVFVGLTFLM 196 (234)
T ss_pred ccccccccCCCCCcccCcccccCc----hHHHHHHHHHHHHH
Confidence 445777789999999999998875 67888999988654
No 33
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=33.56 E-value=2.5e+02 Score=27.73 Aligned_cols=70 Identities=14% Similarity=0.137 Sum_probs=41.8
Q ss_pred CCCChHHHHHHHHHHHHHHhcceehhhhHhhhhcCCChHHHHHHHHHHHHHHHHHHHHHHH----hCCCcceee
Q 014618 30 SPPPWPEAILLGFQHYIVMLGTTVLIPTSLVPQMGGGNEEKAKVIQTLLFVAGLNTLLQSL----FGTRLPAVM 99 (421)
Q Consensus 30 ~~~~~~~~~~~Glq~~l~m~~~~v~~p~il~~a~gl~~~~~~~~i~a~~~~~gi~tllq~~----~G~rlPiv~ 99 (421)
++.++...+...+-..+.........|..+.+..|.++.+.........+...+...+-+. +|.|..+..
T Consensus 13 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~ 86 (399)
T PRK05122 13 LTLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVF 86 (399)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHH
Confidence 4444344344433333332223334566566668999988887777777878888887775 465555543
No 34
>PF01914 MarC: MarC family integral membrane protein; InterPro: IPR002771 Members of this family are integral membrane proteins that includes the antibiotic resistance protein MarC. These proteins may be transporters. ; GO: 0016021 integral to membrane
Probab=30.89 E-value=4.3e+02 Score=24.31 Aligned_cols=29 Identities=10% Similarity=0.127 Sum_probs=18.9
Q ss_pred hhhhhhccCcc-------chHHHHHHHHhHhhhhhc
Q 014618 156 WRNVTRFLSPL-------SVVPLISLVGFGLYEFGF 184 (421)
Q Consensus 156 ~~~l~~~iPp~-------V~g~~l~~IGl~l~~~~~ 184 (421)
-+++.|.+-+. +.|.+++.+|+.++-.|+
T Consensus 164 a~~i~~~lG~~g~~vi~Ri~Glil~aiavq~i~~Gl 199 (203)
T PF01914_consen 164 ADKIMRRLGKTGLQVITRIMGLILAAIAVQMILSGL 199 (203)
T ss_pred hHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 36777777764 467777777776655444
No 35
>KOG4085 consensus Uncharacterized conserved protein [Function unknown]
Probab=28.03 E-value=1.4e+02 Score=26.03 Aligned_cols=46 Identities=20% Similarity=0.167 Sum_probs=34.9
Q ss_pred ccCCchhHHHHHHHHHHHHHhhhHHHHHHhhCChHHHHHHHHHHHHHHHH
Q 014618 358 TRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVLE 407 (421)
Q Consensus 358 tg~~sr~~~~~a~~~ll~l~~~p~~~~l~~~IP~avlggvll~~~g~i~~ 407 (421)
-+-.+|.+++.++++++++|.+. .++.=|.-..++++-++-|.+.+
T Consensus 28 ~r~l~rl~gilgaf~~~~fGvf~----~ITls~~c~vAgvlqm~agfivl 73 (175)
T KOG4085|consen 28 YRWLCRLSGILGAFSCAIFGVFN----CITLSPLCIVAGVLQMMAGFIVL 73 (175)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhh----HHhhhHHHHHHHHHHHHHHHHHH
Confidence 34456888999999999888776 77777888888887766666544
No 36
>PRK03699 putative transporter; Provisional
Probab=25.99 E-value=2.3e+02 Score=28.23 Aligned_cols=38 Identities=11% Similarity=0.218 Sum_probs=23.3
Q ss_pred hhhhHhhhhcCCChHHHHHHHHHHHHHHHHHHHHHHHh
Q 014618 54 LIPTSLVPQMGGGNEEKAKVIQTLLFVAGLNTLLQSLF 91 (421)
Q Consensus 54 ~~p~il~~a~gl~~~~~~~~i~a~~~~~gi~tllq~~~ 91 (421)
..|..+.+..|+|..+...+...-.+...++.++-+++
T Consensus 227 ~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l 264 (394)
T PRK03699 227 WVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFI 264 (394)
T ss_pred HHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 35777766679988765555444444555666655543
No 37
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=23.54 E-value=2.2e+02 Score=29.86 Aligned_cols=32 Identities=13% Similarity=0.143 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhccCccchHHH
Q 014618 140 LIVASTLQIVLGFSGLWRNVTRFLSPLSVVPL 171 (421)
Q Consensus 140 ~lv~Gll~~llg~~gl~~~l~~~iPp~V~g~~ 171 (421)
+..++++.+++|+.+-++++...+|..|.|..
T Consensus 325 ~~~aavili~lgl~pk~~al~~sIP~pVlGGa 356 (451)
T COG2233 325 IAGAAVILILLGLFPKFGALIQSIPSPVLGGA 356 (451)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHhCChhhhhHH
Confidence 55778899999999888999999998887754
No 38
>PF15110 TMEM141: TMEM141 protein family; PDB: 2LOR_A.
Probab=22.75 E-value=1.3e+02 Score=24.16 Aligned_cols=23 Identities=13% Similarity=0.114 Sum_probs=17.7
Q ss_pred ccchhhHHHHHHHHHHHHHHHHH
Q 014618 216 KNIFDRFAVIFSVVIVWIYAHLL 238 (421)
Q Consensus 216 ~~~~~~~aiLigiv~g~~~a~~~ 238 (421)
-++..++++|++++++++.++..
T Consensus 53 lpYp~q~~~LVS~v~~sv~sY~v 75 (94)
T PF15110_consen 53 LPYPFQWNILVSVVVASVASYQV 75 (94)
T ss_dssp SSSSS-HHHHHHHHHHHHHHHHH
T ss_pred CCCCCCchhHHHHHHhhhhhhhh
Confidence 45667889999999999988754
No 39
>PRK10133 L-fucose transporter; Provisional
Probab=22.11 E-value=4.2e+02 Score=27.07 Aligned_cols=48 Identities=10% Similarity=0.110 Sum_probs=33.9
Q ss_pred ehhhhHhhhhcCCChHHHHHHHHHHHHHHHHHHHHHHH----hCCCcceeeec
Q 014618 53 VLIPTSLVPQMGGGNEEKAKVIQTLLFVAGLNTLLQSL----FGTRLPAVMGG 101 (421)
Q Consensus 53 v~~p~il~~a~gl~~~~~~~~i~a~~~~~gi~tllq~~----~G~rlPiv~gp 101 (421)
...|.+ .+..|+++.+.......-.+...++.+..+. +|.|..+..+-
T Consensus 47 ~~~p~i-~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~ 98 (438)
T PRK10133 47 ILLPQF-QQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGL 98 (438)
T ss_pred HHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHH
Confidence 345765 5568999988888888877888888887765 56665554433
No 40
>PRK11663 regulatory protein UhpC; Provisional
Probab=21.70 E-value=3.4e+02 Score=27.50 Aligned_cols=38 Identities=11% Similarity=0.291 Sum_probs=27.9
Q ss_pred ehhhhHhhhhcCCChHHHHHHHHHHHHHHHHHHHHHHHh
Q 014618 53 VLIPTSLVPQMGGGNEEKAKVIQTLLFVAGLNTLLQSLF 91 (421)
Q Consensus 53 v~~p~il~~a~gl~~~~~~~~i~a~~~~~gi~tllq~~~ 91 (421)
...|.+..+ .|++..+...+.....+..+++.++-+++
T Consensus 44 ~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l 81 (434)
T PRK11663 44 AAMPEMLAD-LGLSRSDIGLLATLFYITYGVSKFVSGIV 81 (434)
T ss_pred HhhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHhhhhHH
Confidence 345666555 89999887777777777778888777763
No 41
>PF00916 Sulfate_transp: Sulfate transporter family; InterPro: IPR011547 A number of proteins involved in the transport of sulphate across a membrane as well as some yet uncharacterised proteins have been shown [, ] to be evolutionary related. These proteins are: Neurospora crassa sulphate permease II (gene cys-14). Yeast sulphate permeases (genes SUL1 and SUL2). Rat sulphate anion transporter 1 (SAT-1). Mammalian DTDST, a probable sulphate transporter which, in human, is involved in the genetic disease, diastrophic dysplasia (DTD). Sulphate transporters 1, 2 and 3 from the legume Stylosanthes hamata. Human pendrin (gene PDS), which is involved in a number of hearing loss genetic diseases. Human protein DRA (Down-Regulated in Adenoma). Soybean early nodulin 70. Escherichia coli hypothetical protein ychM. Caenorhabditis elegans hypothetical protein F41D9.5. These proteins are highly hydrophobic and seem to contain about 12 transmembrane domains.; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=21.66 E-value=3.1e+02 Score=25.97 Aligned_cols=81 Identities=15% Similarity=0.272 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHHHHHHhCCCcceeeecccchHHHHHHHHHhcccCCCCCCChhhhhhhHHHHHHHHHHHHHHHHHHHhhh
Q 014618 75 QTLLFVAGLNTLLQSLFGTRLPAVMGGSYTFVPSTISIILAGRFSNYSGDPVEKFKRTMRAIQGSLIVASTLQIVLGFSG 154 (421)
Q Consensus 75 ~a~~~~~gi~tllq~~~G~rlPiv~gps~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ga~lv~Gll~~llg~~g 154 (421)
..=+++-|++-++-+++| .+|...+.|-..+. . +.|-. ..+. .++++++.+++-+.
T Consensus 182 n~El~a~G~aNi~s~~~g-g~p~~~s~srs~~~-----~-~~Ga~-----------t~~s-----~~~~~~~~l~~l~~- 237 (280)
T PF00916_consen 182 NQELIALGLANIVSGLFG-GMPGSGSFSRSAVN-----Y-RAGAR-----------TRLS-----GLISALFVLLVLLF- 237 (280)
T ss_pred HHHHHHhhhccccchhhc-ccccccccccchHH-----H-hcCcc-----------eeeh-----hHHHHHHHHHHHHH-
Confidence 355688899999999885 88876555432221 1 11110 1222 23333333322222
Q ss_pred hhhhhhhccCccchHHHHHHHHhHhh
Q 014618 155 LWRNVTRFLSPLSVVPLISLVGFGLY 180 (421)
Q Consensus 155 l~~~l~~~iPp~V~g~~l~~IGl~l~ 180 (421)
...+.+++|..+.+.++..+|+.+.
T Consensus 238 -~~~~l~~iP~~~La~ili~~~~~l~ 262 (280)
T PF00916_consen 238 -LAPLLAYIPKAVLAAILIVVGISLI 262 (280)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 2567889999999999988888765
No 42
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=20.85 E-value=9.8e+02 Score=25.05 Aligned_cols=97 Identities=11% Similarity=0.046 Sum_probs=51.0
Q ss_pred hcCCChHHHHHHHHHHHHHHHHHHHHHHH----hCCCcceeeecccchHHHHHHHHHhcccCCCCCCChhhhhhhHHHHH
Q 014618 62 QMGGGNEEKAKVIQTLLFVAGLNTLLQSL----FGTRLPAVMGGSYTFVPSTISIILAGRFSNYSGDPVEKFKRTMRAIQ 137 (421)
Q Consensus 62 a~gl~~~~~~~~i~a~~~~~gi~tllq~~----~G~rlPiv~gps~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (421)
..|++++|...+.+.-.++.++.-+..+. +|.|.....+-....++........... ..++...+
T Consensus 64 ~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~~-----------~~s~~~ll 132 (462)
T PRK15034 64 GFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNP-----------NTPFGIFI 132 (462)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccc-----------CCCHHHHH
Confidence 48999998877777677777776566654 6777655433322212211111100000 01344555
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhccCccchHHH
Q 014618 138 GSLIVASTLQIVLGFSGLWRNVTRFLSPLSVVPL 171 (421)
Q Consensus 138 ga~lv~Gll~~llg~~gl~~~l~~~iPp~V~g~~ 171 (421)
..-++.|+--. .+....+.+.+++|+.--|..
T Consensus 133 i~r~l~Gigg~--~f~~~~~~vs~wfp~~~rG~A 164 (462)
T PRK15034 133 VIALLCGFAGA--NFASSMGNISFFFPKAKQGSA 164 (462)
T ss_pred HHHHHHHHHHH--hHHHHHHHHHHHCCHhHhHHH
Confidence 55555555322 222224778889998765543
No 43
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=20.01 E-value=9.5e+02 Score=26.88 Aligned_cols=44 Identities=7% Similarity=0.070 Sum_probs=30.8
Q ss_pred hhhHhhhhcCCChHHHHHHHHHHHHHHHHHHHHHHH----hCCCcceee
Q 014618 55 IPTSLVPQMGGGNEEKAKVIQTLLFVAGLNTLLQSL----FGTRLPAVM 99 (421)
Q Consensus 55 ~p~il~~a~gl~~~~~~~~i~a~~~~~gi~tllq~~----~G~rlPiv~ 99 (421)
.|.+.. ..|++..+...+.+...+...+++++.++ +|.|..++.
T Consensus 190 lp~i~~-~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii 237 (742)
T TIGR01299 190 LPSAEK-DLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLI 237 (742)
T ss_pred HHHHHH-HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHH
Confidence 344433 37899888877888888888899888876 565544433
Done!