Query 014620
Match_columns 421
No_of_seqs 164 out of 1031
Neff 4.4
Searched_HMMs 29240
Date Mon Mar 25 14:51:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014620.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014620hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vz6_A Ornithine acetyl-transf 100.0 2E-141 7E-146 1070.4 28.4 339 66-420 3-344 (393)
2 1vra_A Arginine biosynthesis b 100.0 4.3E-76 1.5E-80 552.5 16.2 193 55-251 16-208 (208)
3 3it4_A Arginine biosynthesis b 100.0 1.9E-74 6.6E-79 538.8 18.1 186 61-251 8-199 (199)
4 1vra_B Arginine biosynthesis b 100.0 2E-74 6.9E-79 543.7 15.3 169 252-421 1-169 (215)
5 2v4i_A Glutamate N-acetyltrans 100.0 4.1E-73 1.4E-77 520.2 18.4 173 71-251 1-173 (173)
6 3it4_B Arginine biosynthesis b 100.0 3.6E-72 1.2E-76 525.0 15.0 160 252-418 1-160 (205)
7 2v4i_B Glutamate N-acetyltrans 100.0 1.6E-71 5.4E-76 522.9 12.5 162 252-421 1-168 (213)
8 2kua_A BCL-2-like protein 10; 70.8 3 0.0001 37.6 3.6 32 354-391 68-101 (170)
9 2y6w_A BCL-2-like protein 2; a 66.7 3.9 0.00013 37.0 3.5 16 376-391 100-115 (177)
10 3s3u_A Cysteine transferase; a 66.2 5 0.00017 41.3 4.5 83 67-163 53-141 (419)
11 3qbr_A SJA, sjchgc06286 protei 64.0 4.5 0.00016 37.2 3.3 71 313-390 55-127 (179)
12 2vof_A BCL-2-related protein A 62.2 4.9 0.00017 35.5 3.1 36 353-393 67-102 (157)
13 2wh6_A Early antigen protein R 59.9 3.2 0.00011 38.1 1.5 15 375-389 103-118 (173)
14 3n2w_A Beta-peptidyl aminopept 58.5 4 0.00014 41.4 2.1 51 251-303 249-300 (373)
15 2w3l_A BCL2-XL, apoptosis regu 57.1 4 0.00014 35.4 1.6 19 375-393 75-93 (144)
16 1b65_A DMPA, protein (aminopep 56.4 13 0.00045 37.7 5.5 220 57-302 21-299 (375)
17 1k3k_A Functional anti-apoptot 55.6 6.1 0.00021 35.3 2.6 32 355-392 62-94 (158)
18 2ims_A Apoptosis regulator BAK 55.1 7.7 0.00026 34.6 3.2 34 354-393 88-121 (171)
19 2jz7_A Selenium binding protei 55.1 9.9 0.00034 30.9 3.5 61 213-303 9-70 (81)
20 3axg_A Endotype 6-aminohexanoa 54.8 13 0.00043 37.6 5.0 86 57-165 44-129 (355)
21 1r2d_A Apoptosis regulator BCL 54.7 4.1 0.00014 38.5 1.4 19 375-393 130-148 (218)
22 2drh_A PH0078 protein, 361AA l 54.5 6.2 0.00021 39.9 2.7 84 248-335 235-328 (361)
23 3sp7_A BCL-2-like protein 1; a 54.2 4.6 0.00016 36.5 1.6 16 375-390 93-108 (172)
24 1o0l_A Apoptosis regulator BCL 52.0 5.1 0.00018 36.4 1.5 18 375-392 91-108 (188)
25 4aq3_A Apoptosis regulator BCL 50.0 14 0.00046 33.3 4.0 15 376-390 100-114 (169)
26 1ohu_A Apoptosis regulator CED 49.1 11 0.00039 34.1 3.3 14 378-391 97-110 (175)
27 4hw4_A Induced myeloid leukemi 47.3 8.2 0.00028 34.3 2.0 16 375-390 83-99 (157)
28 4b4s_A BCL-2-like protein 10; 47.1 6.6 0.00023 35.7 1.4 16 378-393 82-97 (175)
29 2nl9_A Fusion protein consisti 44.7 6.8 0.00023 34.5 1.1 14 379-392 88-101 (157)
30 2xa0_A BCL-2, apoptosis regula 42.8 8.7 0.0003 35.9 1.6 64 318-393 92-155 (207)
31 3pk1_A Induced myeloid leukemi 41.8 9.3 0.00032 35.2 1.5 17 375-391 116-133 (189)
32 3ilc_A BCL-2-like protein 1; a 39.2 11 0.00039 35.0 1.7 18 375-392 131-148 (197)
33 2a5y_A Apoptosis regulator CED 37.2 12 0.00041 34.9 1.5 14 378-391 117-130 (204)
34 1qys_A TOP7; alpha-beta, novel 35.1 1.7E+02 0.0058 23.9 7.8 61 318-403 28-90 (106)
35 1f16_A Protein (apoptosis regu 31.1 16 0.00056 33.3 1.4 17 377-393 102-118 (192)
36 3nxa_A Protein S100-A16; S100 28.3 55 0.0019 26.1 3.9 24 314-337 72-95 (100)
37 3fwt_A Macrophage migration in 25.7 63 0.0022 27.3 4.0 30 145-174 90-119 (133)
38 1unn_C POL IV, DNA polymerase 25.5 49 0.0017 26.8 3.2 35 315-351 19-56 (115)
39 3b64_A Macrophage migration in 25.4 63 0.0021 25.9 3.8 30 145-174 69-98 (112)
40 3m20_A 4-oxalocrotonate tautom 24.8 79 0.0027 22.8 3.9 30 145-174 11-40 (62)
41 3abf_A 4-oxalocrotonate tautom 24.6 78 0.0027 22.4 3.8 30 145-174 13-42 (64)
42 1hfo_A Migration inhibitory fa 23.9 68 0.0023 25.6 3.7 30 145-174 68-97 (113)
43 1uiz_A MIF, macrophage migrati 23.2 71 0.0024 25.6 3.7 30 145-174 69-98 (115)
44 2opa_A Probable tautomerase YW 22.7 52 0.0018 23.1 2.5 29 146-174 13-41 (61)
45 2xcz_A Possible ATLS1-like lig 22.7 75 0.0026 25.5 3.8 30 145-174 69-98 (115)
46 1xc0_A Pardaxin P-4, PA4; BEND 22.3 31 0.0011 23.1 1.1 12 364-375 8-19 (33)
47 2jvf_A De novo protein M7; tet 21.3 2.5E+02 0.0085 22.5 6.4 54 318-396 30-83 (96)
48 3m21_A Probable tautomerase HP 21.1 61 0.0021 23.7 2.7 30 145-174 15-44 (67)
49 2os5_A Acemif; macrophage migr 21.0 82 0.0028 25.6 3.7 30 145-174 69-98 (119)
50 3djh_A Macrophage migration in 20.8 84 0.0029 25.5 3.7 30 145-174 68-97 (114)
51 3fwu_A Macrophage migration in 20.8 83 0.0028 26.6 3.8 29 146-174 91-119 (133)
52 2z8u_A Tata-box-binding protei 20.3 51 0.0017 30.2 2.5 92 90-191 27-127 (188)
53 1otf_A 4-oxalocrotonate tautom 20.0 90 0.0031 21.8 3.3 30 145-174 12-41 (62)
No 1
>1vz6_A Ornithine acetyl-transferase; clavulanic acid, N-acetyl- ornithine, N-acetyl-glutamate, antibiotic; 2.75A {Streptomyces clavuligerus} SCOP: d.154.1.2 PDB: 1vz7_A 1vz8_A
Probab=100.00 E-value=2e-141 Score=1070.41 Aligned_cols=339 Identities=35% Similarity=0.529 Sum_probs=319.1
Q ss_pred CCCccccCceEEeeeEeecccCCCCCcEEEEEeCCCceEEEEecCCCccccchhchHhhcCCCCCeeEEEEecCCccccC
Q 014620 66 PGGVTAAEGFKAAGIYAGVRAKGEKPDVALVLCDVDAAAAGAFTTNVVAAAPVVYCKKTLDSSKTARAVLINAGQANAAT 145 (421)
Q Consensus 66 ~ggv~~p~GF~aag~~aGiK~~~~k~DLali~sd~pa~~AgvFT~N~~~AAPV~~~r~~l~~~~~~rAvvvNSGnANA~T 145 (421)
+++++.|+||+++|++||||+++ |+||+||+|+.||.+|||||+|+|+||||+|||++|+ ++++||||||||||||||
T Consensus 3 ~~~~~~p~Gf~a~g~~aGiK~~g-r~Dlali~s~~p~~~AgvFT~N~~~AAPV~~~~~~l~-~g~~rAvvvNSGnANA~T 80 (393)
T 1vz6_A 3 DSTPKTPRGFVVHTAPVGLADDG-RDDFTVLASTAPATVSAVFTRSRFAGPSVVLCREAVA-DGQARGVVVLARNANVAT 80 (393)
T ss_dssp -----CCTTEEEEEECCCSSTTC-CCCEEEEEESSCCEEEEEECCCTTCCHHHHHHHHHTT-TSBCCEEEEEEEECCCSC
T ss_pred CCCCCCCCeEEEEEEEccccCCC-CCCEEEEEeCCCceEEEEeCCCceeeceehHHHhhcc-cCcceEEEECCCCccccc
Confidence 57899999999999999999876 7999999999999999999999999999999999996 468999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHhCCCCCcEEEeccccCCcccChHHHHhhHHHHHhhcCCCCccHHHHHHHHcCCCCCccEEEE
Q 014620 146 GDAGYQDVVDCANTVAMLLKMRSEEVLIESTGVIGQRIKKDALLNSLPKLVNSLSSSTEGADSAAVAITTTDLVSKSVAV 225 (421)
Q Consensus 146 G~~G~~da~~~a~~~A~~Lgi~~~~VlvaSTGVIG~~Lpmdki~~~i~~l~~~L~~~~~~~~~aA~AImTTDt~pK~~a~ 225 (421)
|++|++|+++|++++|+.|||++++|||+||||||+|||||||+++||.++..|+. ++|++||+||||||||||++++
T Consensus 81 G~~G~~da~~~~~~~A~~lg~~~~~Vlv~STGVIG~~Lpmdki~~gi~~~~~~l~~--~~~~~aA~AImTTDt~pK~~~~ 158 (393)
T 1vz6_A 81 GLEGEENAREVREAVARALGLPEGEMLIASTGVIGRQYPMESIREHLKTLEWPAGE--GGFDRAARAIMTTDTRPKEVRV 158 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCGGGEEEEEEEESSCCCCHHHHHHHHTTCCCCSSS--BCHHHHHHHTCSSCSSCEEEEE
T ss_pred cHHHHHHHHHHHHHHHHHhCCChhhEEEeCcccccCCCCHHHHHHHHHHHHHhccc--cCHHHHHHHHhccCCccEEEEE
Confidence 99999999999999999999999999999999999999999999999999999974 5999999999999999999998
Q ss_pred EEEECCeEEEEeEEeccCCcCCCcccchhhhhccCCCCCHHHHHHHHHHHHhcccCceeeCCCCCchhhhhhhhcCCCCC
Q 014620 226 ESQVGGTYIRVGGMAKGSGMIHPNMATMLGVVTTDASVDSDVWRKMVKVAVNRSFNQITVDGDTSTNDTVIALASGLSRS 305 (421)
Q Consensus 226 ~~~i~g~~v~i~GiAKGsGMI~PnMATML~fI~TDA~i~~~~L~~~L~~av~~SFN~ItVDGDtSTNDtvlllAnG~a~~ 305 (421)
++ +| |+|+|||||||||||||||||+||+|||+|+++.||++|++++++|||||||||||||||||++||||++|
T Consensus 159 ~~--~g--v~i~GiAKGsGMI~PnMATML~fi~TDA~i~~~~Lq~~L~~av~~SFN~ItVDGDtSTNDtvlllAnG~ag- 233 (393)
T 1vz6_A 159 SV--GG--ATLVGIAKGVGMLEPDMATLLTFFATDARLDPAEQDRLFRRVMDRTFNAVSIDTDTSTSDTAVLFANGLAG- 233 (393)
T ss_dssp EE--TT--EEEEEEEECSSSCCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHTGGGBCSSSCCCSSCEEEEEEEEEEE-
T ss_pred EE--CC--EEEEEEEccCccCCCcccceeEEEEecCcCCHHHHHHHHHHHHHhcCCCEeeCCCCchhhhhhheeCCCCC-
Confidence 88 66 99999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ccccCCCchhHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEEEeCCCCHHHHHHHHHHhhcchhhhhhhhCCCCChhHH
Q 014620 306 SRISSVDCNEAKQLQACLDAVMQGLAKSIAWDGEGATCLIEVRVTGANSEAEAAKIARSVASSSLVKAAVYGRDPNWGRI 385 (421)
Q Consensus 306 ~~i~~~~~~~~~~F~~aL~~v~~~LAk~Iv~DGEGATKli~V~V~GA~s~~~A~~iAraVa~S~LVKtAi~G~DpNWGRI 385 (421)
. ++|+.|+++|++||++||||||||||||||||||+|+||+|++||+++||+|++||||||||||+|||||||
T Consensus 234 ~-------~~~~~f~~aL~~v~~~LA~~IvrDGEGATK~i~v~V~GA~s~~~A~~iA~sIa~S~LVKtAi~G~DpNWGRI 306 (393)
T 1vz6_A 234 E-------VDAGEFEEALHTAALALVKDIASDGEGAAKLIEVQVTGARDDAQAKRVGKTVVNSPLVKTAVHGCDPNWGRV 306 (393)
T ss_dssp E-------CCHHHHHHHHHHHHHHHHHHHHHTCTTCSSEEEEEEEEESSHHHHHHHHHHHHTCHHHHHHHHTTCCCHHHH
T ss_pred C-------ccHHHHHHHHHHHHHHHHHHHHhcCCCCceEEEEEEECCCCHHHHHHHHHHHccCHHHHHHHhcCCCCHHHH
Confidence 1 138899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcccC--cccccceeEEEeCCEEEeeCC-cCCCCC
Q 014620 386 AAAAGYAG--VSFYQNKLRILLGDSLLMDGG-QPLPFD 420 (421)
Q Consensus 386 laAvG~sg--~~~d~~~v~I~~g~~~v~~~G-~~~~~d 420 (421)
+||+|||| ++|||++++|+||+++|+++| ++.+||
T Consensus 307 laAvG~sg~~~~~d~~~v~i~~g~v~v~~~G~~~~~~~ 344 (393)
T 1vz6_A 307 AMAIGKCSDDTDIDQERVTIRFGEVEVYPPKARGDQAD 344 (393)
T ss_dssp HHHHHTCTTCTTCCTTTCEEEETTEEEECC-------C
T ss_pred HhhhccCCCCcccchhheEEEECCEEEEcCCCcCCCCC
Confidence 99999999 999999999999999999999 888887
No 2
>1vra_A Arginine biosynthesis bifunctional protein ARGJ; 10175521, S genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.00A {Bacillus halodurans}
Probab=100.00 E-value=4.3e-76 Score=552.51 Aligned_cols=193 Identities=38% Similarity=0.554 Sum_probs=184.3
Q ss_pred CCCCCCCceecCCCccccCceEEeeeEeecccCCCCCcEEEEEeCCCceEEEEecCCCccccchhchHhhcCCCCCeeEE
Q 014620 55 IFLPEGPWKQIPGGVTAAEGFKAAGIYAGVRAKGEKPDVALVLCDVDAAAAGAFTTNVVAAAPVVYCKKTLDSSKTARAV 134 (421)
Q Consensus 55 ~~~p~~~~~~~~ggv~~p~GF~aag~~aGiK~~~~k~DLali~sd~pa~~AgvFT~N~~~AAPV~~~r~~l~~~~~~rAv 134 (421)
|-+|++.|+.++++++.|+||++++++||||++ |+||+||+||.||.+|||||+|+|+||||+|||++|+.++++|||
T Consensus 16 ~~~~~~~~~~~~~~v~~p~Gf~a~g~~aGiK~~--r~Dlali~s~~p~~aAgVFT~N~~~AAPV~~~r~~l~~~g~~rAv 93 (208)
T 1vra_A 16 INETANVLKLETGSVTSAKGFSAVGIHTGVKRK--RKDLGAIVCEVPASSAAVYTLNKVQAAPLKVTQESIAVEGKLQAM 93 (208)
T ss_dssp --CCSCCEECTTCCGGGSTTEEEEEECCSSSSS--SCCEEEEEEEEEEEEEEEEBCCSSCCHHHHHHHHHHHHHSEEEEE
T ss_pred ecCCCCCCccCCCCccCCCeEEEEEEEcCCCCC--CCCEEEEEeCCCceEEEEeCCCceeeceehHHHHhhccCCceEEE
Confidence 467999999999999999999999999999975 789999999999999999999999999999999999623689999
Q ss_pred EEecCCccccCcHHHHHHHHHHHHHHHHHhCCCCCcEEEeccccCCcccChHHHHhhHHHHHhhcCCCCccHHHHHHHHc
Q 014620 135 LINAGQANAATGDAGYQDVVDCANTVAMLLKMRSEEVLIESTGVIGQRIKKDALLNSLPKLVNSLSSSTEGADSAAVAIT 214 (421)
Q Consensus 135 vvNSGnANA~TG~~G~~da~~~a~~~A~~Lgi~~~~VlvaSTGVIG~~Lpmdki~~~i~~l~~~L~~~~~~~~~aA~AIm 214 (421)
||||||||||||++|++|+++|++++|+.|||++++|||+||||||+|||||||+++||.++..|+. ++|++||+|||
T Consensus 94 vvNSGnANA~TG~~G~~da~~~a~~~A~~lgi~~~~VlvaSTGVIG~~LPmdki~~gi~~l~~~L~~--~~~~~AA~AIM 171 (208)
T 1vra_A 94 IVNSGIANACTGKRGLDDAYTMRAVGAETFHIPEHYVAVTSTGVIGEFLPMDVITNGIRQLKPEATI--EGAHAFNEAIL 171 (208)
T ss_dssp EEEEEECCCSCHHHHHHHHHHHHHHHHHHHTSCGGGEEEEEEEESSCCCCHHHHHHHHHHCCCBSSH--HHHHHHHHHHC
T ss_pred EEccCCccccccHHHHHHHHHHHHHHHHHhCCChhHEEEeCCccccCCCCHHHHHHHHHHHHHhccc--cCHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999999999999964 59999999999
Q ss_pred CCCCCccEEEEEEEECCeEEEEeEEeccCCcCCCccc
Q 014620 215 TTDLVSKSVAVESQVGGTYIRVGGMAKGSGMIHPNMA 251 (421)
Q Consensus 215 TTDt~pK~~a~~~~i~g~~v~i~GiAKGsGMI~PnMA 251 (421)
|||||||+++++++++|++|+|+||||||||||||||
T Consensus 172 TTDT~pK~~~~~~~i~G~~vtI~GiAKGsGMI~PnMA 208 (208)
T 1vra_A 172 TTDTVEKHTCYQTIVNGKTVTVGGVAKGSGMIHPNMA 208 (208)
T ss_dssp SSCSSCCEEEEEEEETTEEEEEEEEEECSSSCCCCBC
T ss_pred cCCCCceEEEEEEEECCEEEEEEEEEeeHhhcCcccC
Confidence 9999999999999999999999999999999999997
No 3
>3it4_A Arginine biosynthesis bifunctional protein ARGJ alpha chain; ornithine acetyltransferase, structural genomics; 1.70A {Mycobacterium tuberculosis} PDB: 3it6_A
Probab=100.00 E-value=1.9e-74 Score=538.77 Aligned_cols=186 Identities=45% Similarity=0.636 Sum_probs=177.5
Q ss_pred CceecCCCccccCceEEeeeEeecccCCCCCcEEEEEeCCC-ceEEEEecCCCccccchhchHhhcCCCCCeeEEEEecC
Q 014620 61 PWKQIPGGVTAAEGFKAAGIYAGVRAKGEKPDVALVLCDVD-AAAAGAFTTNVVAAAPVVYCKKTLDSSKTARAVLINAG 139 (421)
Q Consensus 61 ~~~~~~ggv~~p~GF~aag~~aGiK~~~~k~DLali~sd~p-a~~AgvFT~N~~~AAPV~~~r~~l~~~~~~rAvvvNSG 139 (421)
.|...++|+|+|+||++++++||||+++ |+||+||+||.| |++|||||+|+|+||||+|||++|+. +++||||||||
T Consensus 8 ~~~~~~ggvt~p~Gf~a~g~~aGiK~~g-r~Dlali~s~~p~~~aAgVFT~N~~~AAPV~~~r~~l~~-g~~rAvvvNSG 85 (199)
T 3it4_A 8 TRLLRAQGVTAPAGFRAAGVAAGIKASG-ALDLALVFNEGPDYAAAGVFTRNQVKAAPVLWTQQVLTT-GRLRAVILNSG 85 (199)
T ss_dssp CEEEESCCTTSSTTEEEEEECCSCSTTC-CCCEEEEEECCSCCBEEEEEBCCSSCCHHHHHHHHHHTT-SBCSEEEEECS
T ss_pred ccccCCCCcccCCeEEEEEEEEecccCC-CCCEEEEEeCCCCeeEEEEECCCcceeccchHHHHHhcc-CceeEEEEcCC
Confidence 4777789999999999999999999875 789999999999 99999999999999999999999975 68999999999
Q ss_pred CccccCcHHHHHHHHHHHHHHHHHhC-----CCCCcEEEeccccCCcccChHHHHhhHHHHHhhcCCCCccHHHHHHHHc
Q 014620 140 QANAATGDAGYQDVVDCANTVAMLLK-----MRSEEVLIESTGVIGQRIKKDALLNSLPKLVNSLSSSTEGADSAAVAIT 214 (421)
Q Consensus 140 nANA~TG~~G~~da~~~a~~~A~~Lg-----i~~~~VlvaSTGVIG~~Lpmdki~~~i~~l~~~L~~~~~~~~~aA~AIm 214 (421)
|||||||++|++|+++|++++|+.|| |++++|||+||||||+|||||||+++||+++..|+.++++|++||+|||
T Consensus 86 nANA~TG~~G~~da~~~~~~~A~~lg~~~~~~~~~~Vlv~STGVIG~~Lp~dki~~gi~~l~~~L~~~~~~~~~aA~AIm 165 (199)
T 3it4_A 86 GANACTGPAGFADTHATAEAVAAALSDWGTETGAIEVAVCSTGLIGDRLPMDKLLAGVAHVVHEMHGGLVGGDEAAHAIM 165 (199)
T ss_dssp BCCCSCHHHHHHHHHHHHHHHHHHHHHHTSCCCGGGEEEEEBSCSSCCCCHHHHHHHHHHHHHHCBSSHHHHHHHHHHTC
T ss_pred CccCCcCHHHHHHHHHHHHHHHHHhCCcccCCChHHEEEeCcccccCCCCHHHHHHhHHHHHHHccccccCHHHHHHHHh
Confidence 99999999999999999999999999 9999999999999999999999999999999999765579999999999
Q ss_pred CCCCCccEEEEEEEECCeEEEEeEEeccCCcCCCccc
Q 014620 215 TTDLVSKSVAVESQVGGTYIRVGGMAKGSGMIHPNMA 251 (421)
Q Consensus 215 TTDt~pK~~a~~~~i~g~~v~i~GiAKGsGMI~PnMA 251 (421)
|||||||+++++++ +| |+|+||||||||||||||
T Consensus 166 TTDT~pK~~~~~~~-~g--v~I~GiAKGsGMI~PnMA 199 (199)
T 3it4_A 166 TTDNVPKQVALHHH-DN--WTVGGMAKGAGMLAPSLA 199 (199)
T ss_dssp SSCSSCEEEEEECT-TS--CEEEEEEECSSSCCCCBC
T ss_pred ccCCCcEEEEEEec-CC--EEEEEEEeehhhcCcCcC
Confidence 99999999999887 55 999999999999999997
No 4
>1vra_B Arginine biosynthesis bifunctional protein ARGJ; 10175521, S genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.00A {Bacillus halodurans}
Probab=100.00 E-value=2e-74 Score=543.73 Aligned_cols=169 Identities=43% Similarity=0.681 Sum_probs=165.5
Q ss_pred chhhhhccCCCCCHHHHHHHHHHHHhcccCceeeCCCCCchhhhhhhhcCCCCCccccCCCchhHHHHHHHHHHHHHHHH
Q 014620 252 TMLGVVTTDASVDSDVWRKMVKVAVNRSFNQITVDGDTSTNDTVIALASGLSRSSRISSVDCNEAKQLQACLDAVMQGLA 331 (421)
Q Consensus 252 TML~fI~TDA~i~~~~L~~~L~~av~~SFN~ItVDGDtSTNDtvlllAnG~a~~~~i~~~~~~~~~~F~~aL~~v~~~LA 331 (421)
|||+||+|||+|+++.||++|++++++|||||||||||||||||++||||++|+++|.+ .+++++.|+++|.+||++||
T Consensus 1 TML~fi~TDA~i~~~~Lq~~L~~av~~SFN~ItVDGDtSTNDtvlllAnG~ag~~~i~~-~~~~~~~f~~aL~~v~~~LA 79 (215)
T 1vra_B 1 TMLSFVTTDANIDHGHLQGALSAITNETFNRITVDGDTSTNDMVVVMASGLAENETLTP-EHPDWANFYKALQLACEDLA 79 (215)
T ss_dssp CCEEEEEECCCCCHHHHHHHHHHHHHHTGGGBCSSSCCCSSCEEEEEECCTTCCSCCCT-TSTTHHHHHHHHHHHHHHHH
T ss_pred CeEEEEeeCCcCCHHHHHHHHHHHHHhcCCCeeeCCCCchhhHHHhhhCCCCCCCcccC-CChhHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999998866 57889999999999999999
Q ss_pred HHHHhccCCCceEEEEEEeCCCCHHHHHHHHHHhhcchhhhhhhhCCCCChhHHHHhhcccCcccccceeEEEeCCEEEe
Q 014620 332 KSIAWDGEGATCLIEVRVTGANSEAEAAKIARSVASSSLVKAAVYGRDPNWGRIAAAAGYAGVSFYQNKLRILLGDSLLM 411 (421)
Q Consensus 332 k~Iv~DGEGATKli~V~V~GA~s~~~A~~iAraVa~S~LVKtAi~G~DpNWGRIlaAvG~sg~~~d~~~v~I~~g~~~v~ 411 (421)
||||||||||||||||+|+||+|+++|+++||+|++||||||||||+|||||||+||+||||++|||++++|+||+++|+
T Consensus 80 ~~IvrDGEGATK~i~v~V~GA~s~~~A~~iA~sIa~S~LVKtAi~G~DpNWGRIlaAvG~sg~~~d~~~v~i~~g~v~v~ 159 (215)
T 1vra_B 80 KQIARDGEGATKLIEVEVTGAANDQEAGMVAKQIVGSDLVKTAIYGADANWGRIICAIGYSGCEVNQETIDIAIGPIVTL 159 (215)
T ss_dssp HHHHHTSTTCSCEEEEEEEEESSHHHHHHHHHHHHTCHHHHHHHHTTCCCHHHHHHHHHHSSSCCCTTSCEEEETTEEEE
T ss_pred HHHHhcCCCCCEEEEEEEECCCCHHHHHHHHHHHcCCHHHHHHHhcCCCCHHHHHHHcCCCCCccchhheEEEECCEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCcCCCCCC
Q 014620 412 DGGQPLPFDR 421 (421)
Q Consensus 412 ~~G~~~~~de 421 (421)
++|+|.+|||
T Consensus 160 ~~G~~~~~~e 169 (215)
T 1vra_B 160 KQSEPTGFSE 169 (215)
T ss_dssp ETTEECCCCH
T ss_pred ECCCCCCCCH
Confidence 9999999885
No 5
>2v4i_A Glutamate N-acetyltransferase 2 alpha chain; cytoplasm, acyl enzyme, NTN hydrolase, acyltransferase, ornithine acetyl transferase; 2.2A {Streptomyces clavuligerus} PDB: 2vzk_A* 2w4n_A* 2yep_A*
Probab=100.00 E-value=4.1e-73 Score=520.21 Aligned_cols=173 Identities=34% Similarity=0.496 Sum_probs=166.4
Q ss_pred ccCceEEeeeEeecccCCCCCcEEEEEeCCCceEEEEecCCCccccchhchHhhcCCCCCeeEEEEecCCccccCcHHHH
Q 014620 71 AAEGFKAAGIYAGVRAKGEKPDVALVLCDVDAAAAGAFTTNVVAAAPVVYCKKTLDSSKTARAVLINAGQANAATGDAGY 150 (421)
Q Consensus 71 ~p~GF~aag~~aGiK~~~~k~DLali~sd~pa~~AgvFT~N~~~AAPV~~~r~~l~~~~~~rAvvvNSGnANA~TG~~G~ 150 (421)
+|+||++++++||||+++ |+||+||+||.||.+|||||+|+|+||||+|||++|+ ++++|||||||||||||||++|+
T Consensus 1 ~p~Gf~a~g~~aGiK~~~-r~Dlali~~~~p~~~AgVFT~N~~~AAPV~~~r~~l~-~~~~rAvvvNSGnANA~TG~~G~ 78 (173)
T 2v4i_A 1 TPRGFVVHTAPVGLADDG-RDDFTVLASTAPATVSAVFTRSRFAGPSVVLCREAVA-DGQARGVVVLARNANVATGLEGE 78 (173)
T ss_dssp CCTTEEEEEECCCSSTTC-CCCEEEEEESSCEEEEEEECCCTTCCHHHHHHHHHTS-SSBCCEEEEEESCCCCSCHHHHH
T ss_pred CCCeEEEEEEEecccCCC-CCCEEEEEeCCCceEEEEeCCCceeeceehHHHhhcc-cCceEEEEEcCCCccccccHHHH
Confidence 489999999999999876 7999999999999999999999999999999999996 46899999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEeccccCCcccChHHHHhhHHHHHhhcCCCCccHHHHHHHHcCCCCCccEEEEEEEEC
Q 014620 151 QDVVDCANTVAMLLKMRSEEVLIESTGVIGQRIKKDALLNSLPKLVNSLSSSTEGADSAAVAITTTDLVSKSVAVESQVG 230 (421)
Q Consensus 151 ~da~~~a~~~A~~Lgi~~~~VlvaSTGVIG~~Lpmdki~~~i~~l~~~L~~~~~~~~~aA~AImTTDt~pK~~a~~~~i~ 230 (421)
+|+++|++++|+.|||++++|||+||||||+|||||||+++||.++..|+. ++|++||+||||||||||++++++ +
T Consensus 79 ~da~~~~~~~A~~lg~~~~~Vlv~STGVIG~~Lp~dki~~gi~~~~~~l~~--~~~~~aA~AImTTDt~pK~~~~~~--~ 154 (173)
T 2v4i_A 79 ENAREVREAVARALGLPEGEMLIASTGVIGRQYPMESIREHLKTLEWPAGE--GGFDRAARAIMTTDTRPKEVRVSV--G 154 (173)
T ss_dssp HHHHHHHHHHHHHTTCCGGGEEEEEESCSSCCCCHHHHHHHHTTCCCCSSC--BCHHHHHHHHCSSCSSCEEEEEEE--T
T ss_pred HHHHHHHHHHHHHhCCCchhEEEecCcccCcCCCHHHHHHHHHHHHHhccc--cCHHHHHHHHhccCCceEEEEEEE--C
Confidence 999999999999999999999999999999999999999999999999974 599999999999999999999988 6
Q ss_pred CeEEEEeEEeccCCcCCCccc
Q 014620 231 GTYIRVGGMAKGSGMIHPNMA 251 (421)
Q Consensus 231 g~~v~i~GiAKGsGMI~PnMA 251 (421)
| |+|+||||||||||||||
T Consensus 155 g--v~i~GiAKGsGMI~PnMA 173 (173)
T 2v4i_A 155 G--ATLVGIAKGVGMLEPDMA 173 (173)
T ss_dssp T--EEEEEEEECSSSCCCCCC
T ss_pred C--EEEEEEEeEhhhcCcCcC
Confidence 6 999999999999999997
No 6
>3it4_B Arginine biosynthesis bifunctional protein ARGJ beta chain; ornithine acetyltransferase, structural genomics; 1.70A {Mycobacterium tuberculosis} PDB: 3it6_B
Probab=100.00 E-value=3.6e-72 Score=525.00 Aligned_cols=160 Identities=36% Similarity=0.558 Sum_probs=155.9
Q ss_pred chhhhhccCCCCCHHHHHHHHHHHHhcccCceeeCCCCCchhhhhhhhcCCCCCccccCCCchhHHHHHHHHHHHHHHHH
Q 014620 252 TMLGVVTTDASVDSDVWRKMVKVAVNRSFNQITVDGDTSTNDTVIALASGLSRSSRISSVDCNEAKQLQACLDAVMQGLA 331 (421)
Q Consensus 252 TML~fI~TDA~i~~~~L~~~L~~av~~SFN~ItVDGDtSTNDtvlllAnG~a~~~~i~~~~~~~~~~F~~aL~~v~~~LA 331 (421)
|||+||+|||+|+++.||++|++++++|||||||||||||||||++||||++|++ +++++|+++|.+||++||
T Consensus 1 TML~fi~TDA~i~~~~Lq~~L~~av~~SFN~ItVDGDtSTNDtvlllAnG~ag~~-------~~~~~f~~aL~~v~~~LA 73 (205)
T 3it4_B 1 TMLCVLTTDAAAEPAALERALRRAAAATFDRLDIDGSCSTNDTVLLLSSGASEIP-------PAQADLDEAVLRVCDDLC 73 (205)
T ss_dssp CCEEEEEECSCCCHHHHHHHHHHHHHHTGGGBCSSSCCCSCCEEEEEECCTTCCC-------CCHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEecCcCCHHHHHHHHHHHHHhcCCCEeeCCCCCchhhhhhhhCCCCCCC-------cCHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999999974 267899999999999999
Q ss_pred HHHHhccCCCceEEEEEEeCCCCHHHHHHHHHHhhcchhhhhhhhCCCCChhHHHHhhcccCcccccceeEEEeCCEEEe
Q 014620 332 KSIAWDGEGATCLIEVRVTGANSEAEAAKIARSVASSSLVKAAVYGRDPNWGRIAAAAGYAGVSFYQNKLRILLGDSLLM 411 (421)
Q Consensus 332 k~Iv~DGEGATKli~V~V~GA~s~~~A~~iAraVa~S~LVKtAi~G~DpNWGRIlaAvG~sg~~~d~~~v~I~~g~~~v~ 411 (421)
||||||||||||||||+|+||+|+++|+++||+|++||||||||||+|||||||+||+||||++|||++++|+||+++|+
T Consensus 74 ~~IvrDGEGATK~i~v~V~gA~s~~~A~~iA~~Ia~S~LVKtAi~G~DpNWGRIlaAvG~sg~~~d~~~v~i~~~~v~v~ 153 (205)
T 3it4_B 74 AQLQADAEGVTKRVTVTVTGAATEDDALVAARQIARDSLVKTALFGSDPNWGRVLAAVGMAPITLDPDRISVSFNGAAVC 153 (205)
T ss_dssp HHHHHTCTTCCCEEEEEEEEESSHHHHHHHHHHHHHCHHHHHHHHTTCCCHHHHHHHHTTSSSCCCGGGCEEEETTEEEE
T ss_pred HHHHhccCCCcEEEEEEEeCCCCHHHHHHHHHHHhcCHHHHHHHhcCCCCHHHHHHhhccCCCCcchhheEEEECCEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCcCCC
Q 014620 412 DGGQPLP 418 (421)
Q Consensus 412 ~~G~~~~ 418 (421)
++|+|.+
T Consensus 154 ~~G~~~~ 160 (205)
T 3it4_B 154 VHGVGAP 160 (205)
T ss_dssp ETTEECT
T ss_pred ECCCCCC
Confidence 9999843
No 7
>2v4i_B Glutamate N-acetyltransferase 2 beta chain; cytoplasm, acyl enzyme, NTN hydrolase, acyltransferase, ornithine acetyl transferase; 2.2A {Streptomyces clavuligerus} PDB: 2vzk_D* 2yep_B* 2vzk_B* 2w4n_B* 2yep_F*
Probab=100.00 E-value=1.6e-71 Score=522.90 Aligned_cols=162 Identities=37% Similarity=0.586 Sum_probs=154.4
Q ss_pred chhhhhccCCCCCHHHHHHHHHHHHhcccCceeeCCCCCchhhhhhhhcCCCCCccccCCCchhHHHHHHHHHHHHHHHH
Q 014620 252 TMLGVVTTDASVDSDVWRKMVKVAVNRSFNQITVDGDTSTNDTVIALASGLSRSSRISSVDCNEAKQLQACLDAVMQGLA 331 (421)
Q Consensus 252 TML~fI~TDA~i~~~~L~~~L~~av~~SFN~ItVDGDtSTNDtvlllAnG~a~~~~i~~~~~~~~~~F~~aL~~v~~~LA 331 (421)
|||+||+|||+|+++.||++|++++++|||||||||||||||||++||||++| + | +++.|+++|.+||++||
T Consensus 1 ~ML~fi~TDA~i~~~~Lq~~L~~av~~SFN~ItVDGDtSTNDtvlllAnG~ag-~-i------~~~~f~~aL~~v~~~LA 72 (213)
T 2v4i_B 1 ALLTFFATDARLDPAEQDRLFRRVMDRTFNAVSIDTDTSTSDTAVLFANGLAG-E-V------DAGEFEEALHTAALALV 72 (213)
T ss_dssp CCEEEEEECCBCCHHHHHHHHHHHHHHTGGGBCSSSCCCSCCEEEEEEECTTC-B-C------CHHHHHHHHHHHHHHHH
T ss_pred CeEEEEecCCcCCHHHHHHHHHHHHHhcCCCEeeCCCCCchhhhheeeCCCCc-c-c------CHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999998 4 4 67899999999999999
Q ss_pred HHHHhccCCCceEEEEEEeCCCCHHHHHHHHHHhhcchhhhhhhhCCCCChhHHHHhhcccC--cccccceeEEEeCCEE
Q 014620 332 KSIAWDGEGATCLIEVRVTGANSEAEAAKIARSVASSSLVKAAVYGRDPNWGRIAAAAGYAG--VSFYQNKLRILLGDSL 409 (421)
Q Consensus 332 k~Iv~DGEGATKli~V~V~GA~s~~~A~~iAraVa~S~LVKtAi~G~DpNWGRIlaAvG~sg--~~~d~~~v~I~~g~~~ 409 (421)
||||||||||||||||+|+||+|+++|+++||+|++||||||||||+|||||||+||+|||| ++|||++++|+||+++
T Consensus 73 ~~IvrDGEGATK~i~V~V~GA~s~~~A~~vA~sIa~S~LVKtAi~G~DpNWGRIlaAiG~sg~~~~~d~~~v~i~~g~v~ 152 (213)
T 2v4i_B 73 KDIASDGEGAAKLIEVQVTGARDDAQAKRVGKTVVNSPLVKTAVHGCDPNWGRVAMAIGKCSDDTDIDQERVTIRFGEVE 152 (213)
T ss_dssp HHHHHSSTTCCCEEEEEEEEESSHHHHHHHHHHHHTCHHHHHHHHTTCCCHHHHHHHHHTCTTCTTCCTTTCEEEETTEE
T ss_pred HHHHhcCCCCcEEEEEEEECCCCHHHHHHHHHHHccCHHHHHHHhcCCCCHHHHHhhhccCCCCcccchhheEEEECCEE
Confidence 99999999999999999999999999999999999999999999999999999999999999 9999999999999999
Q ss_pred EeeCC-c---CCCCCC
Q 014620 410 LMDGG-Q---PLPFDR 421 (421)
Q Consensus 410 v~~~G-~---~~~~de 421 (421)
|+++| + |.+|||
T Consensus 153 v~~~G~~~~~~~~~~e 168 (213)
T 2v4i_B 153 VYPPKARGDQADDALR 168 (213)
T ss_dssp EECC-------CHHHH
T ss_pred EEeCCCcccCCCCCCH
Confidence 99999 6 666653
No 8
>2kua_A BCL-2-like protein 10; BOO, DIVA, apoptosis, BH3-only, membrane, mitochondri nucleus, transmembrane; NMR {Mus musculus}
Probab=70.84 E-value=3 Score=37.65 Aligned_cols=32 Identities=13% Similarity=0.439 Sum_probs=22.4
Q ss_pred CHHHHHHHHHHhhcchhhhhhhhCC--CCChhHHHHhhcc
Q 014620 354 SEAEAAKIARSVASSSLVKAAVYGR--DPNWGRIAAAAGY 391 (421)
Q Consensus 354 s~~~A~~iAraVa~S~LVKtAi~G~--DpNWGRIlaAvG~ 391 (421)
+..+|..+-.+|+.. +|.. ..|||||++=.--
T Consensus 68 ~~~~a~~~f~~Va~e------lF~ddg~iNWGRIVaLfaF 101 (170)
T 2kua_A 68 SRGNRLELVKQMADK------LLSKDQDFSWSQLVMLLAF 101 (170)
T ss_dssp TTSCHHHHHHHHHHH------SCCSSSCCCHHHHHHHHHH
T ss_pred CcchHHHHHHHHHHH------HhccCCCCCHHHHHHHHHH
Confidence 566677666677654 4554 7999999986543
No 9
>2y6w_A BCL-2-like protein 2; apoptosis; HET: PGE; 2.00A {Homo sapiens} PDB: 1mk3_A 1zy3_A
Probab=66.69 E-value=3.9 Score=36.97 Aligned_cols=16 Identities=38% Similarity=0.887 Sum_probs=11.8
Q ss_pred hCCCCChhHHHHhhcc
Q 014620 376 YGRDPNWGRIAAAAGY 391 (421)
Q Consensus 376 ~G~DpNWGRIlaAvG~ 391 (421)
|...+|||||++-..-
T Consensus 100 F~dGinWGRIVaLfaF 115 (177)
T 2y6w_A 100 FQGGPNWGRLVAFFVF 115 (177)
T ss_dssp HHCCCHHHHHHHHHHH
T ss_pred hcCCCCHHHHHHHHHH
Confidence 4445999999987643
No 10
>3s3u_A Cysteine transferase; autoproteolytic, carbapenem, biosynthesis, DOM-fold, amidohy transferase; 1.60A {Streptomyces cattleya} PDB: 3tm1_A 3tm2_A*
Probab=66.25 E-value=5 Score=41.34 Aligned_cols=83 Identities=23% Similarity=0.268 Sum_probs=53.3
Q ss_pred CCccccCceEEeeeEeecccCCCCCcEEEEEeCC-CceEEEEecCCCccccchhchHh--hcCC---CCCeeEEEEecCC
Q 014620 67 GGVTAAEGFKAAGIYAGVRAKGEKPDVALVLCDV-DAAAAGAFTTNVVAAAPVVYCKK--TLDS---SKTARAVLINAGQ 140 (421)
Q Consensus 67 ggv~~p~GF~aag~~aGiK~~~~k~DLali~sd~-pa~~AgvFT~N~~~AAPV~~~r~--~l~~---~~~~rAvvvNSGn 140 (421)
+.+|-.+|++++...- .....+--+.+|.++. ++ +|+|==+. .+| .+|| .|.. -.++.|||+--|.
T Consensus 53 n~ITDV~Gi~VGha~~--~~~~~~TG~TVIl~~~~ga-~a~vdvrG---ggP--gtRETdLL~p~~~v~~v~aIvLtGGS 124 (419)
T 3s3u_A 53 NGLTDVPGVRVGHAGR--TGDGWLTGVTVVLAPPGGA-VAAVDVRG---GGP--GTRETDALDPRNLVQTIDAVVLTGGS 124 (419)
T ss_dssp SSGGGSTTCEEEEEEE--EETTEEEEEEEEECCTTCB-EEEEEEES---CCS--CEESCGGGSTTSSCCCBSEEEEESSH
T ss_pred CccccCCCcEEeeeec--cCCCCCcceEEEEeCCCCc-EEEEEecC---Ccc--cccchhhcCccccccccceEEEeCcc
Confidence 4788889999987652 1000123578899987 54 45554344 566 4555 4542 2478899887666
Q ss_pred ccccCcHHHHHHHHHHHHHHHHH
Q 014620 141 ANAATGDAGYQDVVDCANTVAML 163 (421)
Q Consensus 141 ANA~TG~~G~~da~~~a~~~A~~ 163 (421)
| -|++.+.-+.+.+.|.
T Consensus 125 A------fGL~Aa~GVm~~L~e~ 141 (419)
T 3s3u_A 125 A------FGLDAAGGVAAWLEEQ 141 (419)
T ss_dssp H------HHTHHHHHHHHHHHHT
T ss_pred h------hhHHHHHHHHHHHHHh
Confidence 4 7888888888877654
No 11
>3qbr_A SJA, sjchgc06286 protein; helical bundle, BCL-2-like fold, apoptosis; HET: NHE; 2.60A {Schistosoma japonicum}
Probab=64.03 E-value=4.5 Score=37.21 Aligned_cols=71 Identities=11% Similarity=0.208 Sum_probs=38.0
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHhccC--CCceEEEEEEeCCCCHHHHHHHHHHhhcchhhhhhhhCCCCChhHHHHhhc
Q 014620 313 CNEAKQLQACLDAVMQGLAKSIAWDGE--GATCLIEVRVTGANSEAEAAKIARSVASSSLVKAAVYGRDPNWGRIAAAAG 390 (421)
Q Consensus 313 ~~~~~~F~~aL~~v~~~LAk~Iv~DGE--GATKli~V~V~GA~s~~~A~~iAraVa~S~LVKtAi~G~DpNWGRIlaAvG 390 (421)
+|...+.-++|..+..+|=+..--.++ +...-+.+.=.|--+++.|+..=..|++. +| ...|||||++=..
T Consensus 55 dp~~~~v~~~L~~iGDEle~r~e~q~ml~~l~~ql~~~~~~~lt~~tA~~~F~~Va~e------LF-DGiNWGRIVaLfa 127 (179)
T 3qbr_A 55 VPNGQEIIHSLLQLVGDFNQRFSQTHEIEPVAQSLGIDSDKPVDKTALEIFYLEILNG------LF-EKLNWGRIVAMFA 127 (179)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHTCSSSSCCCHHHHHHHHHHHHHH------HT-SSCCHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhhccccccCCCchHHHHHHHHHHHH------Hh-CCCCHHHHHHHHH
Confidence 344555556666666555444211110 00000011112344677888888888877 44 2499999998554
No 12
>2vof_A BCL-2-related protein A1; BH3, apoptosis, Pro-surviVal, mitochondrion, protein- complex; 1.8A {Mus musculus} PDB: 2vog_A 2voh_A* 2voi_A 3i1h_A 3mqp_A 2vm6_A
Probab=62.23 E-value=4.9 Score=35.51 Aligned_cols=36 Identities=28% Similarity=0.361 Sum_probs=24.1
Q ss_pred CCHHHHHHHHHHhhcchhhhhhhhCCCCChhHHHHhhcccC
Q 014620 353 NSEAEAAKIARSVASSSLVKAAVYGRDPNWGRIAAAAGYAG 393 (421)
Q Consensus 353 ~s~~~A~~iAraVa~S~LVKtAi~G~DpNWGRIlaAvG~sg 393 (421)
.+++.|+..-.+|+..- +....+|||||++-..-+|
T Consensus 67 ~~~~~a~~~f~~Va~el-----F~dg~inWGRIVal~~F~g 102 (157)
T 2vof_A 67 ESIDTARIIFNQVMEKE-----FEDGIINWGRIVTIFAFGG 102 (157)
T ss_dssp CSHHHHHHHHHHHHHHH-----HTTCCCCHHHHHHHHHHHH
T ss_pred CCcchHHHHHHHHHHHH-----hcCCCCCHHHHHHHHHHHH
Confidence 46777777666666552 1234589999999776544
No 13
>2wh6_A Early antigen protein R; mitochondrion, early protein, transmembrane, viral protein,; 1.50A {Human herpesvirus 4} PDB: 2v6q_A 2xpx_A 1q59_A
Probab=59.89 E-value=3.2 Score=38.06 Aligned_cols=15 Identities=40% Similarity=0.698 Sum_probs=11.3
Q ss_pred hhCC-CCChhHHHHhh
Q 014620 375 VYGR-DPNWGRIAAAA 389 (421)
Q Consensus 375 i~G~-DpNWGRIlaAv 389 (421)
||.. ++|||||++=.
T Consensus 103 LF~dG~INWGRIVALf 118 (173)
T 2wh6_A 103 IFHRGDPSLGRALAWM 118 (173)
T ss_dssp HHSSSCCCHHHHHHHH
T ss_pred HHhCCCCCcceehhhh
Confidence 4544 68999999855
No 14
>3n2w_A Beta-peptidyl aminopeptidase; NTN hydrolase, alpha-beta-BETA-alpha sandwich, beta-aminopep beta-peptide, hydrolase; HET: GOL; 1.45A {Sphingosinicella xenopeptidilytica} SCOP: d.154.1.0 PDB: 3n33_A* 3ndv_A* 3nfb_A* 3n5i_A
Probab=58.47 E-value=4 Score=41.40 Aligned_cols=51 Identities=18% Similarity=0.252 Sum_probs=36.4
Q ss_pred cchhhhhccCCCCCHHHHHHHHHHHHhcccCc-eeeCCCCCchhhhhhhhcCCC
Q 014620 251 ATMLGVVTTDASVDSDVWRKMVKVAVNRSFNQ-ITVDGDTSTNDTVIALASGLS 303 (421)
Q Consensus 251 ATML~fI~TDA~i~~~~L~~~L~~av~~SFN~-ItVDGDtSTNDtvlllAnG~a 303 (421)
.|.+.+|.|||++++..|+++-+++-+- +-| |+.=+ ..--|+++.||+|..
T Consensus 249 gTtI~VVATDApL~~~Ql~RlA~rA~~G-lAR~g~p~~-~~dGD~vfAfSTg~~ 300 (373)
T 3n2w_A 249 NSLLIVIATDAPLMPHQLERMARRAALG-VGRNGSTAG-ALSGEFALAFSTSHV 300 (373)
T ss_dssp -CEEEEEEECSCCCHHHHHHHHHTHHHH-HHHTTCCCC-TTCCEEEEEEEEEEE
T ss_pred CCEEEEEEeCCcCCHHHHHHHHHhhccC-cceeccCCC-CCCcCeEEEEecCCC
Confidence 7999999999999999999998887652 211 22111 222478999999864
No 15
>2w3l_A BCL2-XL, apoptosis regulator BCL-2; HET: DRO; 2.10A {Homo sapiens} PDB: 2o2f_A*
Probab=57.14 E-value=4 Score=35.44 Aligned_cols=19 Identities=37% Similarity=0.816 Sum_probs=13.6
Q ss_pred hhCCCCChhHHHHhhcccC
Q 014620 375 VYGRDPNWGRIAAAAGYAG 393 (421)
Q Consensus 375 i~G~DpNWGRIlaAvG~sg 393 (421)
+|....|||||++-..-+|
T Consensus 75 lF~dGinWGRIValf~F~g 93 (144)
T 2w3l_A 75 LFRDGVNWGRIVAFFEFGG 93 (144)
T ss_dssp HTTTCCCHHHHHHHHHHHH
T ss_pred HhcCCCCHHHHHHHHHHHH
Confidence 4545599999999875443
No 16
>1b65_A DMPA, protein (aminopeptidase); hydrolase, peptide degradation, NTN hydrolase; 1.82A {Ochrobactrum anthropi} SCOP: d.154.1.1
Probab=56.39 E-value=13 Score=37.69 Aligned_cols=220 Identities=14% Similarity=0.213 Sum_probs=111.5
Q ss_pred CCCCCceecCCCccccCceEEeeeEeecccC--------CCCCcEEEEEeCCC-----ceEEEEecCCCccccc-hhchH
Q 014620 57 LPEGPWKQIPGGVTAAEGFKAAGIYAGVRAK--------GEKPDVALVLCDVD-----AAAAGAFTTNVVAAAP-VVYCK 122 (421)
Q Consensus 57 ~p~~~~~~~~ggv~~p~GF~aag~~aGiK~~--------~~k~DLali~sd~p-----a~~AgvFT~N~~~AAP-V~~~r 122 (421)
+|.|+.+ .+|-.+|++++...- ... .-+--+.+|..+.. -..||+|-+|-|--+| ..+.|
T Consensus 21 ~~~Gp~n----~ITDV~GV~VGh~t~--~~g~~~~~~~~~~~TGvTvIlp~~g~~~~~~~~Agv~V~nG~G~~~G~~~~r 94 (375)
T 1b65_A 21 GVTGPYN----AITDVDGVGVGFQTI--IENEPRPGRKRPARSGVTAILPHMQSETPVPVYAGVHRFNGNGEMTGTHWIE 94 (375)
T ss_dssp SCBCTTS----SGGGSTTCEEEEEEE--ECSSCCTTCSSCCEEEEEEEETTTTCSSCCCEEEEEEEEEESSCBCSHHHHH
T ss_pred CCCCCCC----ccccCCCceEEeeEC--cCCCccccccCCCCcceEEEEeCCCCcccCCeeEEEEecCCCCcCCCcceee
Confidence 4666664 788999999986653 110 11346788888752 4678999999865555 35567
Q ss_pred hh--cCCCCCeeEEEEecCCccccCcHHHHHHHHHHHHHHHHHh-CC-C-----CCcEEEecc--ccCCc----ccChHH
Q 014620 123 KT--LDSSKTARAVLINAGQANAATGDAGYQDVVDCANTVAMLL-KM-R-----SEEVLIEST--GVIGQ----RIKKDA 187 (421)
Q Consensus 123 ~~--l~~~~~~rAvvvNSGnANA~TG~~G~~da~~~a~~~A~~L-gi-~-----~~~VlvaST--GVIG~----~Lpmdk 187 (421)
|. |.. +|++-.|.| -|+ .+.-+.+.+.|.- ++ + .-.-+|+.+ |..|. +..-+-
T Consensus 95 EtglL~~-----pIvLTggsa------~Gl-aa~gv~~~l~e~~~g~~~~~~~~~~vPIV~e~fDl~lndi~~~~p~~~~ 162 (375)
T 1b65_A 95 DGGYFLG-----PVVITNTHG------IGM-AHHATVRWMVDRYASTYQTDDFLWIMPVVAETYDGALNDINGFPVTEAD 162 (375)
T ss_dssp HHCEECS-----CEEEEEGGG------HHH-HHHHHHHHHHHHTHHHHSSSSCCCCCCEEEEECCTTTSCGGGCCCCHHH
T ss_pred ccccccC-----CEEEECCcH------HHH-HHHHHHHHHHHhCCCCccccccCcccCeeeEeecCCCCCcCCCCCCHHH
Confidence 63 432 566554443 455 4444444444431 11 1 011122211 22221 222222
Q ss_pred HHhhHHHHHh-hcCCCCccHHHHHHHHcCCCCCc---cEEEEEEEECCeEEEEeEEec---c-------CCc-----CC-
Q 014620 188 LLNSLPKLVN-SLSSSTEGADSAAVAITTTDLVS---KSVAVESQVGGTYIRVGGMAK---G-------SGM-----IH- 247 (421)
Q Consensus 188 i~~~i~~l~~-~L~~~~~~~~~aA~AImTTDt~p---K~~a~~~~i~g~~v~i~GiAK---G-------sGM-----I~- 247 (421)
..+++..+.. .. .++.--|-... |+=.++ =.+++.++.+++.++|+.+.- | +|. +.
T Consensus 163 g~~A~~~A~~~~v---~eG~VGAGtGa-~~~~~KGGiGtASr~v~~~~~~~tVGALV~~N~G~~~~~~iaG~~~G~~l~~ 238 (375)
T 1b65_A 163 VRKALDNVASGPV---QEGNCGGGTGM-ITYGFKGGTGTASRVVEFGGRSFTIGALVQANHGQRDWLTIAGVPVGQHMRD 238 (375)
T ss_dssp HHHHHHTCBSSCC---CCBSCGGGTTC-EETTEECEEEEEEEEEEETTEEEEEEEEEEECCCCGGGCCBTTBCHHHHCCT
T ss_pred HHHHHHhccCCCC---cccCcccccCc-ccCCCccccEeeEEEeccCCCCeEEEEEEEecCCCcccceeccccccccccc
Confidence 2222222110 00 00100011111 100110 124556665666788776621 1 111 21
Q ss_pred -------CcccchhhhhccCCCCCHHHHHHHHHHHHh---cccCceeeCCCCCchhhhhhhhcCC
Q 014620 248 -------PNMATMLGVVTTDASVDSDVWRKMVKVAVN---RSFNQITVDGDTSTNDTVIALASGL 302 (421)
Q Consensus 248 -------PnMATML~fI~TDA~i~~~~L~~~L~~av~---~SFN~ItVDGDtSTNDtvlllAnG~ 302 (421)
|...|.+.+|.|||++++..|+++-+++-+ |+=.-.+ .+--|+++.||+|.
T Consensus 239 ~~~~~~~~~~gTtI~VVATDApL~~~Ql~RlA~rA~~GlAR~g~p~~----~~dGD~vfAfSTg~ 299 (375)
T 1b65_A 239 GTPQSQLQERGSIIVVLATDLPLMPHQLKRLARRASIGIGRNGTPGG----NNSGDIFIAFSTAN 299 (375)
T ss_dssp TCHHHHC----CEEEEEEECSCCCHHHHHHHHHTHHHHHHTTTCCCC----TTCEEEEEEEECCS
T ss_pred ccccccccCCCCEEEEEEeCCcCCHHHHHHHHhhcccceeeecCCCC----CCCCCEEEEEecCC
Confidence 234799999999999999999999888764 3322221 22248999999997
No 17
>1k3k_A Functional anti-apoptotic factor VBCL-2 homolog; solution structure, apoptosis; NMR {Human herpesvirus 8} SCOP: f.1.4.1
Probab=55.59 E-value=6.1 Score=35.30 Aligned_cols=32 Identities=22% Similarity=0.316 Sum_probs=18.5
Q ss_pred HHHHHHHHHHhhcchhhhhhhhC-CCCChhHHHHhhccc
Q 014620 355 EAEAAKIARSVASSSLVKAAVYG-RDPNWGRIAAAAGYA 392 (421)
Q Consensus 355 ~~~A~~iAraVa~S~LVKtAi~G-~DpNWGRIlaAvG~s 392 (421)
.+++...=..|+.. +|. ..+|||||++=+.-+
T Consensus 62 ~~~~~~~F~~Va~e------lF~DG~iNWGRIVaLfaF~ 94 (158)
T 1k3k_A 62 STTGIDQLGLSMLQ------VSGDGNMNWGRALAILTFG 94 (158)
T ss_dssp HHHHHHHHHTHHHH------HCSSCSCCHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHH------HhcCCCCCHHHHHHHHHHH
Confidence 44554444444433 443 348999999866533
No 18
>2ims_A Apoptosis regulator BAK; dimer; 1.48A {Homo sapiens} PDB: 2imt_A 2jcn_A 2yv6_A 3qbr_B* 2xpx_B 2jby_B 2voh_B*
Probab=55.07 E-value=7.7 Score=34.65 Aligned_cols=34 Identities=26% Similarity=0.530 Sum_probs=22.0
Q ss_pred CHHHHHHHHHHhhcchhhhhhhhCCCCChhHHHHhhcccC
Q 014620 354 SEAEAAKIARSVASSSLVKAAVYGRDPNWGRIAAAAGYAG 393 (421)
Q Consensus 354 s~~~A~~iAraVa~S~LVKtAi~G~DpNWGRIlaAvG~sg 393 (421)
+.+.|...=.+|+.. +|....|||||++-..-+|
T Consensus 88 ~~~~~~~~f~~Va~e------lF~dGinWGRIVal~~F~g 121 (171)
T 2ims_A 88 TAENAYEYFTKIATS------LFESGINWGRVVALLGFGY 121 (171)
T ss_dssp SHHHHHHHHHHHHHH------HTTTCCCHHHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHH------HccCCCCHHHHHHHHHHHH
Confidence 344566665666655 3444499999999876544
No 19
>2jz7_A Selenium binding protein; NMR {Methanococcus vannielii}
Probab=55.06 E-value=9.9 Score=30.87 Aligned_cols=61 Identities=16% Similarity=0.094 Sum_probs=47.0
Q ss_pred HcCCCCCccEEEEEEEECCeEEEEeEEeccCCcCCCcccchhhhhccCCCCCHHHHHHHHHHHHhcccCce-eeCCCCCc
Q 014620 213 ITTTDLVSKSVAVESQVGGTYIRVGGMAKGSGMIHPNMATMLGVVTTDASVDSDVWRKMVKVAVNRSFNQI-TVDGDTST 291 (421)
Q Consensus 213 ImTTDt~pK~~a~~~~i~g~~v~i~GiAKGsGMI~PnMATML~fI~TDA~i~~~~L~~~L~~av~~SFN~I-tVDGDtST 291 (421)
|.|||+.| |.++...|+.+|.-- --...|++|..+|-+.-=|.| .||=|+|+
T Consensus 9 itTT~~i~----------G~~I~~lGiV~G~~v-----------------aR~~A~~rm~e~A~~lGAnAVVgvr~d~~~ 61 (81)
T 2jz7_A 9 ITTADEIP----------GLQLYSLGIASTISD-----------------NVDEIVENLRKQVKAKGGMGLIAFRITCAD 61 (81)
T ss_dssp EESSCCCT----------TSCCEEEEEECCCCS-----------------SHHHHHHHHHHHHHHTTCCEEECCCCCCCS
T ss_pred EEeCCCcC----------CcEEEEEEEEEEEEe-----------------hHHHHHHHHHHHHHHcCCCEEEEEEEEccc
Confidence 45788755 566688999999863 334689999999998888874 67888888
Q ss_pred hhhhhhhhcCCC
Q 014620 292 NDTVIALASGLS 303 (421)
Q Consensus 292 NDtvlllAnG~a 303 (421)
+ .++|+|-+
T Consensus 62 g---eV~ayGTA 70 (81)
T 2jz7_A 62 G---KFLGYGTI 70 (81)
T ss_dssp S---SCCCCEEE
T ss_pred c---EEEEEEEE
Confidence 4 78888866
No 20
>3axg_A Endotype 6-aminohexanoat-oligomer hydrolase; nylon oligomer; 2.00A {Agromyces}
Probab=54.79 E-value=13 Score=37.58 Aligned_cols=86 Identities=8% Similarity=0.011 Sum_probs=60.9
Q ss_pred CCCCCceecCCCccccCceEEeeeEeecccCCCCCcEEEEEeCCCceEEEEecCCCccccchhchHhhcCCCCCeeEEEE
Q 014620 57 LPEGPWKQIPGGVTAAEGFKAAGIYAGVRAKGEKPDVALVLCDVDAAAAGAFTTNVVAAAPVVYCKKTLDSSKTARAVLI 136 (421)
Q Consensus 57 ~p~~~~~~~~ggv~~p~GF~aag~~aGiK~~~~k~DLali~sd~pa~~AgvFT~N~~~AAPV~~~r~~l~~~~~~rAvvv 136 (421)
+|.|+++ .+|-.+|+++....-+ . -+--+.+|..+.+ ..|||+-+|-+.. +|+.+ .++.+|++
T Consensus 44 ~~~Gp~N----~ITDV~GV~VGh~td~---~-~~TGvTvIlp~~g-~~AgvdVrgG~pg-----tre~v---e~v~aIvL 106 (355)
T 3axg_A 44 RSTGREM----LRFDFPGVSIGAAHYE---E-GPTGATVIHIPAG-ARTAVDARGGAVG-----LSGGY---DFNHAICL 106 (355)
T ss_dssp ECCCSEE----EECCCTTCEEEEEEET---T-TTEEEEEEEEEEE-EEEEEEECSSSCC-----EECCC---SEEEEEEE
T ss_pred cCCCCCC----ccccCCCceEeeeecC---C-CCceEEEEEcCCC-CEEEEEeecCCCc-----cccce---eecccEEE
Confidence 6777776 6788899999887732 1 2568899999866 6788999997655 35534 36789988
Q ss_pred ecCCccccCcHHHHHHHHHHHHHHHHHhC
Q 014620 137 NAGQANAATGDAGYQDVVDCANTVAMLLK 165 (421)
Q Consensus 137 NSGnANA~TG~~G~~da~~~a~~~A~~Lg 165 (421)
-.|.| -|+..+.-+.+.+.|.-+
T Consensus 107 Tggsa------~GL~Aa~Gv~~~l~e~~g 129 (355)
T 3axg_A 107 AGGAS------YGLEAGAGVSGALLERLE 129 (355)
T ss_dssp ESSGG------GGGHHHHHHHHHHHHHTT
T ss_pred eCCch------hhHHHHHHHHHHHHHcCC
Confidence 76665 566666666666666644
No 21
>1r2d_A Apoptosis regulator BCL-X; monomeric, alpha-helical; 1.95A {Homo sapiens} SCOP: f.1.4.1 PDB: 2b48_A 1r2i_A 1r2h_A 1r2g_A 1r2e_A 1bxl_A 1lxl_A 1maz_A 3cva_X 1ysg_A* 1ysi_A* 1ysn_A* 2o1y_A* 2yxj_A* 3pl7_A 3qkd_A* 1g5j_A 2lp8_A* 2lpc_A
Probab=54.74 E-value=4.1 Score=38.48 Aligned_cols=19 Identities=37% Similarity=0.837 Sum_probs=13.7
Q ss_pred hhCCCCChhHHHHhhcccC
Q 014620 375 VYGRDPNWGRIAAAAGYAG 393 (421)
Q Consensus 375 i~G~DpNWGRIlaAvG~sg 393 (421)
||....|||||++-..-+|
T Consensus 130 lF~DGINWGRIVaLfaF~g 148 (218)
T 1r2d_A 130 LFRDGVNWGRIVAFFSFGG 148 (218)
T ss_dssp GGTTCCCHHHHHHHHHHHH
T ss_pred HhcCCCcHHHHHHHHHHHH
Confidence 3445599999998776543
No 22
>2drh_A PH0078 protein, 361AA long hypothetical D-aminopeptidase; structural genomics, NPPSFA; 2.10A {Pyrococcus horikoshii}
Probab=54.54 E-value=6.2 Score=39.86 Aligned_cols=84 Identities=15% Similarity=0.218 Sum_probs=49.7
Q ss_pred CcccchhhhhccCCCCCHHHHHHHHHHHHh---cccCceeeCCCCCchhhhhhhhcCCC-CC---ccc--cCCCc-hhHH
Q 014620 248 PNMATMLGVVTTDASVDSDVWRKMVKVAVN---RSFNQITVDGDTSTNDTVIALASGLS-RS---SRI--SSVDC-NEAK 317 (421)
Q Consensus 248 PnMATML~fI~TDA~i~~~~L~~~L~~av~---~SFN~ItVDGDtSTNDtvlllAnG~a-~~---~~i--~~~~~-~~~~ 317 (421)
|...|.+.+|.|||++++..|+++-+++-+ |+=.-. + ..--|+++.||+|.. .. +.+ ....+ .--.
T Consensus 235 ~~~nTtI~VVATDApL~~~Ql~RlA~rA~~GlAR~g~p~---~-~~dGD~vfAfSTg~~~~~~~~~~~~~~~~~~~~l~~ 310 (361)
T 2drh_A 235 EGKGSIIMIIATDAPLTGRQLNRVAKRAIVGLARTGGYA---Y-NGSGDIAVAFSTANRIKHYEKEVIEIKALPDSVISP 310 (361)
T ss_dssp ----CEEEEEEECSCCCHHHHHHHHHHHHHHHHHTTCCC---C-TTCEEEEEEEEEEEEEETTCCSCEEEEECCGGGCHH
T ss_pred cCCCCEEEEEEeCCcCCHHHHHHHHhhcccceeecccCC---C-CCCCCeEEEEecccccccccccccccccCChhHHHH
Confidence 445899999999999999999999988764 332222 1 233589999999963 10 000 00111 1234
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 014620 318 QLQACLDAVMQGLAKSIA 335 (421)
Q Consensus 318 ~F~~aL~~v~~~LAk~Iv 335 (421)
.|+.|.+.+.+-+...+.
T Consensus 311 l~~aAaeaveeAI~nav~ 328 (361)
T 2drh_A 311 LFKATAEAVEEAIINSLL 328 (361)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 566666666655555554
No 23
>3sp7_A BCL-2-like protein 1; apoptosis regulator-inhibitor complex; HET: 03B; 1.40A {Homo sapiens} PDB: 2lp8_A* 2lpc_A 1ysg_A* 1ysi_A* 1ysn_A* 2o1y_A* 2yxj_A* 3pl7_A 3qkd_A* 1g5j_A 4ehr_A* 3spf_A* 2pon_B 3r85_A 2p1l_A 4a1u_A* 2yj1_A 2yq7_A 2yq6_A 3fdm_A ...
Probab=54.24 E-value=4.6 Score=36.51 Aligned_cols=16 Identities=38% Similarity=0.740 Sum_probs=11.6
Q ss_pred hhCCCCChhHHHHhhc
Q 014620 375 VYGRDPNWGRIAAAAG 390 (421)
Q Consensus 375 i~G~DpNWGRIlaAvG 390 (421)
+|...+|||||++=+-
T Consensus 93 lF~dGinWGRIVaLfa 108 (172)
T 3sp7_A 93 LFRDGVNWGRIVAFFS 108 (172)
T ss_dssp HTTTCCCHHHHHHHHH
T ss_pred HHcCCCCHHHHHHHHH
Confidence 3555599999998554
No 24
>1o0l_A Apoptosis regulator BCL-W; helical bundle, binding groove, BH3; NMR {Homo sapiens} SCOP: f.1.4.1
Probab=51.98 E-value=5.1 Score=36.44 Aligned_cols=18 Identities=33% Similarity=0.831 Sum_probs=13.1
Q ss_pred hhCCCCChhHHHHhhccc
Q 014620 375 VYGRDPNWGRIAAAAGYA 392 (421)
Q Consensus 375 i~G~DpNWGRIlaAvG~s 392 (421)
+|....|||||++-..-+
T Consensus 91 lF~dGinWGRIValfaF~ 108 (188)
T 1o0l_A 91 LFQGGPNWGRLVAFFVFG 108 (188)
T ss_dssp HSSSCCCHHHHHHHHHHH
T ss_pred HhcCCCCHHHHHHHHHHH
Confidence 355569999999877543
No 25
>4aq3_A Apoptosis regulator BCL-2, BCL-2-like protein 1; chimera; HET: 398; 2.40A {Homo sapiens} PDB: 1g5m_A 1gjh_A 1ysw_A* 2o21_A* 2o22_A*
Probab=50.01 E-value=14 Score=33.32 Aligned_cols=15 Identities=40% Similarity=0.722 Sum_probs=10.5
Q ss_pred hCCCCChhHHHHhhc
Q 014620 376 YGRDPNWGRIAAAAG 390 (421)
Q Consensus 376 ~G~DpNWGRIlaAvG 390 (421)
|....|||||++=+.
T Consensus 100 F~dGiNWGRIVaLfa 114 (169)
T 4aq3_A 100 FRDGVNWGRIVAFFE 114 (169)
T ss_dssp TTTCCCHHHHHHHHH
T ss_pred hcCCCCHHHHHHHHH
Confidence 333469999998554
No 26
>1ohu_A Apoptosis regulator CED-9; BCL-2 family; 2.03A {Caenorhabditis elegans} SCOP: f.1.4.1 PDB: 1ty4_A
Probab=49.07 E-value=11 Score=34.07 Aligned_cols=14 Identities=14% Similarity=0.453 Sum_probs=10.3
Q ss_pred CCCChhHHHHhhcc
Q 014620 378 RDPNWGRIAAAAGY 391 (421)
Q Consensus 378 ~DpNWGRIlaAvG~ 391 (421)
...|||||++=.--
T Consensus 97 dginWGRIVaLfaF 110 (175)
T 1ohu_A 97 SPMSYGRLIGLISF 110 (175)
T ss_dssp -CCCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHH
Confidence 56999999986543
No 27
>4hw4_A Induced myeloid leukemia cell differentiation Pro 1; anti-apoptotic protein, BH3 peptides, apoptosis; 1.53A {Homo sapiens} PDB: 3kj0_A 2pqk_A 3kj1_A 3kj2_A 3kz0_A 3mk8_A 2kbw_A 4hw3_A* 4hw2_A* 3d7v_A 3io9_A 2nl9_A* 2nla_A 4g35_A* 1wsx_A 2jm6_B 2roc_A 2rod_A 3mk8_B
Probab=47.26 E-value=8.2 Score=34.33 Aligned_cols=16 Identities=38% Similarity=0.858 Sum_probs=11.0
Q ss_pred hhCCC-CChhHHHHhhc
Q 014620 375 VYGRD-PNWGRIAAAAG 390 (421)
Q Consensus 375 i~G~D-pNWGRIlaAvG 390 (421)
+|... .|||||++=+.
T Consensus 83 lF~dGi~NWGRIVaLfa 99 (157)
T 4hw4_A 83 VFSDGVTNWGRIVTLIS 99 (157)
T ss_dssp HGGGSCCCHHHHHHHHH
T ss_pred HhccCCccHHHHHHHHH
Confidence 34444 59999998554
No 28
>4b4s_A BCL-2-like protein 10; apoptosis; HET: PG4; 1.90A {Homo sapiens}
Probab=47.11 E-value=6.6 Score=35.71 Aligned_cols=16 Identities=38% Similarity=1.010 Sum_probs=11.8
Q ss_pred CCCChhHHHHhhcccC
Q 014620 378 RDPNWGRIAAAAGYAG 393 (421)
Q Consensus 378 ~DpNWGRIlaAvG~sg 393 (421)
.+.|||||++-+--+|
T Consensus 82 ~~inWGRIV~l~~F~g 97 (175)
T 4b4s_A 82 PGPTWGRVVTLVTFAG 97 (175)
T ss_dssp TCCCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHH
Confidence 3699999998765443
No 29
>2nl9_A Fusion protein consisting of induced myeloid LEUK differentiation protein MCL-1 homolog...; apoptosis, MCL-1, BIM; HET: MSE; 1.55A {Rattus norvegicus} PDB: 2nla_A 3d7v_A 3io9_A 3kj0_A 2pqk_A 3kj1_A 3kj2_A 3kz0_A 3mk8_A 1wsx_A 2jm6_B 2roc_A 2rod_A 2kbw_A 3mk8_B
Probab=44.72 E-value=6.8 Score=34.46 Aligned_cols=14 Identities=36% Similarity=0.838 Sum_probs=10.4
Q ss_pred CCChhHHHHhhccc
Q 014620 379 DPNWGRIAAAAGYA 392 (421)
Q Consensus 379 DpNWGRIlaAvG~s 392 (421)
.+|||||++-..-+
T Consensus 88 i~nWGRIValf~F~ 101 (157)
T 2nl9_A 88 VTNWGRIVTLISFG 101 (157)
T ss_dssp CCCHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHH
Confidence 46999999866543
No 30
>2xa0_A BCL-2, apoptosis regulator BCL-2; cell death; 2.70A {Homo sapiens} PDB: 1gjh_A 1ysw_A* 2o21_A* 2o22_A* 1g5m_A
Probab=42.79 E-value=8.7 Score=35.88 Aligned_cols=64 Identities=17% Similarity=0.275 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCceEEEEEEeCCCCHHHHHHHHHHhhcchhhhhhhhCCCCChhHHHHhhcccC
Q 014620 318 QLQACLDAVMQGLAKSIAWDGEGATCLIEVRVTGANSEAEAAKIARSVASSSLVKAAVYGRDPNWGRIAAAAGYAG 393 (421)
Q Consensus 318 ~F~~aL~~v~~~LAk~Iv~DGEGATKli~V~V~GA~s~~~A~~iAraVa~S~LVKtAi~G~DpNWGRIlaAvG~sg 393 (421)
+..++|..+..+|=++--+.=++..+-+.+ +.+.+...=..|+.. +|....|||||++-..-+|
T Consensus 92 ~v~~~Lr~lgdEle~~~~~~F~~m~~qL~i------t~~~a~~~F~~Va~e------lF~DGiNWGRIVaLfaF~g 155 (207)
T 2xa0_A 92 VVHLTLRQAGDDFSRRYRRDFAEMSSQLHL------TPFTARGRFATVVEE------LFRDGVNWGRIVAFFEFGG 155 (207)
T ss_dssp CHHHHHHHHHHHHHHHHHHHSCCGGGTCCC------CTTTHHHHHHHHHHH------HHTTCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHhCC------CcchHHHHHHHHHHH------HhcCCCCHHHHHHHHHHHH
Confidence 345566666666655443322222222211 222344444444443 3445599999998775443
No 31
>3pk1_A Induced myeloid leukemia cell differentiation Pro 1; BCL-2 family fold, regulation of apoptosis, mitochondri apoptosis-apoptosis regulator complex; 2.49A {Homo sapiens}
Probab=41.76 E-value=9.3 Score=35.19 Aligned_cols=17 Identities=35% Similarity=0.907 Sum_probs=11.5
Q ss_pred hhCCC-CChhHHHHhhcc
Q 014620 375 VYGRD-PNWGRIAAAAGY 391 (421)
Q Consensus 375 i~G~D-pNWGRIlaAvG~ 391 (421)
+|... +|||||++=+.-
T Consensus 116 lF~DGi~NWGRIVaLfaF 133 (189)
T 3pk1_A 116 VFSDGVTNWGRIVTLISF 133 (189)
T ss_dssp HTTTSCCCHHHHHHHHHH
T ss_pred HhccCCccHHHHHHHHHH
Confidence 34444 599999986543
No 32
>3ilc_A BCL-2-like protein 1; apoptosis, BH3 domain, alternative splicing, cytoplasm, membrane, mitochondrion, transmembrane; 1.64A {Mus musculus} PDB: 3ihd_A 2bzw_A 1pq1_A 1pq0_A 3ihc_A 3iih_A 1af3_A 3ihf_A 3ilb_A 3iig_A 3ihe_A
Probab=39.15 E-value=11 Score=34.99 Aligned_cols=18 Identities=33% Similarity=0.761 Sum_probs=12.6
Q ss_pred hhCCCCChhHHHHhhccc
Q 014620 375 VYGRDPNWGRIAAAAGYA 392 (421)
Q Consensus 375 i~G~DpNWGRIlaAvG~s 392 (421)
+|....|||||++-+.-.
T Consensus 131 lF~DGiNWGRIVaLfaFg 148 (197)
T 3ilc_A 131 LFRDGVNWGRIVAFFSFG 148 (197)
T ss_dssp GGTTCCCHHHHHHHHHHH
T ss_pred HhcCCCCHHHHHHHHHHH
Confidence 344458999999876543
No 33
>2a5y_A Apoptosis regulator CED-9; apoptosis; HET: ATP; 2.60A {Caenorhabditis elegans} SCOP: f.1.4.1
Probab=37.15 E-value=12 Score=34.87 Aligned_cols=14 Identities=14% Similarity=0.453 Sum_probs=10.9
Q ss_pred CCCChhHHHHhhcc
Q 014620 378 RDPNWGRIAAAAGY 391 (421)
Q Consensus 378 ~DpNWGRIlaAvG~ 391 (421)
...|||||++=.--
T Consensus 117 dGiNWGRIVaLfaF 130 (204)
T 2a5y_A 117 SPMSYGRLIGLISF 130 (204)
T ss_dssp CTTCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHH
Confidence 66999999986543
No 34
>1qys_A TOP7; alpha-beta, novel fold, de novo protein; 2.50A {Computationally designed sequence} SCOP: k.41.1.1
Probab=35.06 E-value=1.7e+02 Score=23.88 Aligned_cols=61 Identities=31% Similarity=0.522 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCceEEEEEEeCCCCHHHHHHHHHHhhcchhhhhhhhCCCCChhHHHHhhcccC--cc
Q 014620 318 QLQACLDAVMQGLAKSIAWDGEGATCLIEVRVTGANSEAEAAKIARSVASSSLVKAAVYGRDPNWGRIAAAAGYAG--VS 395 (421)
Q Consensus 318 ~F~~aL~~v~~~LAk~Iv~DGEGATKli~V~V~GA~s~~~A~~iAraVa~S~LVKtAi~G~DpNWGRIlaAvG~sg--~~ 395 (421)
++|..|.++|..+-|| || |.+.|.++ |++..+|.+.|-- |. .+.+-+||-. +.
T Consensus 28 elqkvlnelmdyikkq------ga-krvrisit-artkkeaekfaai-----li------------kvfaelgyndinvt 82 (106)
T 1qys_A 28 ELQKVLNELMDYIKKQ------GA-KRVRISIT-ARTKKEAEKFAAI-----LI------------KVFAELGYNDINVT 82 (106)
T ss_dssp HHHHHHHHHHHHHHHH------CC-SEEEEEEE-CSSHHHHHHHHHH-----HH------------HHHHHTTCCEEEEE
T ss_pred HHHHHHHHHHHHHHhc------CC-cEEEEEEE-ecchhHHHHHHHH-----HH------------HHHHHhCCcceeEE
Confidence 5889999999888776 43 67788885 7899999988753 33 4567788864 34
Q ss_pred cccceeEE
Q 014620 396 FYQNKLRI 403 (421)
Q Consensus 396 ~d~~~v~I 403 (421)
||-+.+.+
T Consensus 83 fdgdtvtv 90 (106)
T 1qys_A 83 FDGDTVTV 90 (106)
T ss_dssp EETTEEEE
T ss_pred EcCCeEEE
Confidence 55554444
No 35
>1f16_A Protein (apoptosis regulator BAX, membrane isoform alpha); helical protein; NMR {Homo sapiens} SCOP: f.1.4.1 PDB: 2k7w_A
Probab=31.09 E-value=16 Score=33.33 Aligned_cols=17 Identities=35% Similarity=0.644 Sum_probs=12.8
Q ss_pred CCCCChhHHHHhhcccC
Q 014620 377 GRDPNWGRIAAAAGYAG 393 (421)
Q Consensus 377 G~DpNWGRIlaAvG~sg 393 (421)
..+.|||||++-..-+|
T Consensus 102 dG~inWGRIValf~F~g 118 (192)
T 1f16_A 102 DGNFNWGRVVALFYFAS 118 (192)
T ss_dssp SSSCCSHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHH
Confidence 34699999998776544
No 36
>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A
Probab=28.34 E-value=55 Score=26.08 Aligned_cols=24 Identities=13% Similarity=0.046 Sum_probs=18.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhc
Q 014620 314 NEAKQLQACLDAVMQGLAKSIAWD 337 (421)
Q Consensus 314 ~~~~~F~~aL~~v~~~LAk~Iv~D 337 (421)
-+|++|...+..++..+.+.+-.+
T Consensus 72 Idf~EF~~~m~~~~~~~~~~~~~~ 95 (100)
T 3nxa_A 72 ISFDEYWTLIGGITGPIAKLIHEQ 95 (100)
T ss_dssp BCHHHHHHHHHHHHGGGHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHhcc
Confidence 368899999998888887776543
No 37
>3fwt_A Macrophage migration inhibitory factor-like protein; homotrimer, tautomerase, cytokine; 1.90A {Leishmania major}
Probab=25.66 E-value=63 Score=27.35 Aligned_cols=30 Identities=7% Similarity=-0.033 Sum_probs=27.1
Q ss_pred CcHHHHHHHHHHHHHHHHHhCCCCCcEEEe
Q 014620 145 TGDAGYQDVVDCANTVAMLLKMRSEEVLIE 174 (421)
Q Consensus 145 TG~~G~~da~~~a~~~A~~Lgi~~~~Vlva 174 (421)
|.++=.+-+.++++.+.+.|||+++.|.|.
T Consensus 90 ~~e~n~~~s~~i~~~l~~~LgI~~~rvyI~ 119 (133)
T 3fwt_A 90 APSKPKMMTPRIAAAITKECGIPAERIYVF 119 (133)
T ss_dssp CTHHHHHHHHHHHHHHHHHHCCCGGGEEEE
T ss_pred CHHHHHHHHHHHHHHHHHHhCcChhhEEEE
Confidence 668888899999999999999999999873
No 38
>1unn_C POL IV, DNA polymerase IV; beta-clamp, translesion, transferase, DNA-directed D polymerase, DNA replication; HET: DNA; 1.9A {Escherichia coli} SCOP: d.240.1.1
Probab=25.52 E-value=49 Score=26.82 Aligned_cols=35 Identities=17% Similarity=0.187 Sum_probs=28.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhccCCCceEEE---EEEeC
Q 014620 315 EAKQLQACLDAVMQGLAKSIAWDGEGATCLIE---VRVTG 351 (421)
Q Consensus 315 ~~~~F~~aL~~v~~~LAk~Iv~DGEGATKli~---V~V~G 351 (421)
++++.+++|..+|.++++.+-+.| ..+.|+ |.|+-
T Consensus 19 ~~~~l~~~l~~l~~~v~~rLr~~~--~~~tV~k~~vkir~ 56 (115)
T 1unn_C 19 HWSECEAIIERLYPELERRLAKVK--PDLLIARQGVKLKF 56 (115)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHC--TTCBCSEEEEEEEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHhhC--CCCeEEEeEEEEEE
Confidence 567899999999999999999999 445555 55543
No 39
>3b64_A Macrophage migration inhibitory factor-like protein; cytokine, MIF, LM1740MIF, lmmif, unknown function; 1.03A {Leishmania major}
Probab=25.43 E-value=63 Score=25.92 Aligned_cols=30 Identities=0% Similarity=-0.051 Sum_probs=26.3
Q ss_pred CcHHHHHHHHHHHHHHHHHhCCCCCcEEEe
Q 014620 145 TGDAGYQDVVDCANTVAMLLKMRSEEVLIE 174 (421)
Q Consensus 145 TG~~G~~da~~~a~~~A~~Lgi~~~~Vlva 174 (421)
|-++=-+-.+++++.+.+.||+++++|.|.
T Consensus 69 ~~eqk~~l~~~i~~~l~~~lgi~~~~v~I~ 98 (112)
T 3b64_A 69 GPSEPEKVTSIVTAAITKECGIVADRIFVL 98 (112)
T ss_dssp CTTHHHHHHHHHHHHHHHHHCCCGGGEEEE
T ss_pred CHHHHHHHHHHHHHHHHHHhCcCcceEEEE
Confidence 457778889999999999999999999874
No 40
>3m20_A 4-oxalocrotonate tautomerase, putative; DMPI, thermophIle, beta-alpha-beta, catalytic proline, isomerase; 2.37A {Archaeoglobus fulgidus}
Probab=24.80 E-value=79 Score=22.81 Aligned_cols=30 Identities=13% Similarity=0.015 Sum_probs=25.4
Q ss_pred CcHHHHHHHHHHHHHHHHHhCCCCCcEEEe
Q 014620 145 TGDAGYQDVVDCANTVAMLLKMRSEEVLIE 174 (421)
Q Consensus 145 TG~~G~~da~~~a~~~A~~Lgi~~~~Vlva 174 (421)
|-++=-+-++++++.+++.||++++.|.|.
T Consensus 11 t~eqK~~L~~~it~~~~~~lg~~~~~v~V~ 40 (62)
T 3m20_A 11 DVGKKREFVERLTSVAAEIYGMDRSAITIL 40 (62)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTCCTTSCEEE
T ss_pred CHHHHHHHHHHHHHHHHHHhCcCcceEEEE
Confidence 456667778899999999999999998874
No 41
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=24.62 E-value=78 Score=22.37 Aligned_cols=30 Identities=20% Similarity=0.075 Sum_probs=25.1
Q ss_pred CcHHHHHHHHHHHHHHHHHhCCCCCcEEEe
Q 014620 145 TGDAGYQDVVDCANTVAMLLKMRSEEVLIE 174 (421)
Q Consensus 145 TG~~G~~da~~~a~~~A~~Lgi~~~~Vlva 174 (421)
|-++=-+-++++++.+++.||++++.|.|.
T Consensus 13 s~eqk~~l~~~lt~~l~~~lg~~~~~v~V~ 42 (64)
T 3abf_A 13 PPEKKRELVRRLTEMASRLLGEPYEEVRVI 42 (64)
T ss_dssp CHHHHHHHHHHHHHHHHHHTTCCGGGEEEE
T ss_pred CHHHHHHHHHHHHHHHHHHhCCCcccEEEE
Confidence 445566778999999999999999998874
No 42
>1hfo_A Migration inhibitory factor; tautomerase; 1.65A {Trichinella spiralis} SCOP: d.80.1.3
Probab=23.86 E-value=68 Score=25.62 Aligned_cols=30 Identities=7% Similarity=0.075 Sum_probs=26.1
Q ss_pred CcHHHHHHHHHHHHHHHHHhCCCCCcEEEe
Q 014620 145 TGDAGYQDVVDCANTVAMLLKMRSEEVLIE 174 (421)
Q Consensus 145 TG~~G~~da~~~a~~~A~~Lgi~~~~Vlva 174 (421)
|-++=.+-.+++++.+.+.||++++.|.|.
T Consensus 68 ~~eqk~~l~~~i~~~l~~~lgi~~~~v~I~ 97 (113)
T 1hfo_A 68 EPSRNRDHSAKLFDHLNTKLGIPKNRMYIH 97 (113)
T ss_dssp SHHHHHHHHHHHHHHHHHHHCCCGGGEEEE
T ss_pred CHHHHHHHHHHHHHHHHHHhCcCcCeEEEE
Confidence 457777889999999999999999999873
No 43
>1uiz_A MIF, macrophage migration inhibitory factor; cytokine, tautomerase; 2.50A {Xenopus laevis} SCOP: d.80.1.3
Probab=23.15 E-value=71 Score=25.65 Aligned_cols=30 Identities=13% Similarity=0.132 Sum_probs=26.2
Q ss_pred CcHHHHHHHHHHHHHHHHHhCCCCCcEEEe
Q 014620 145 TGDAGYQDVVDCANTVAMLLKMRSEEVLIE 174 (421)
Q Consensus 145 TG~~G~~da~~~a~~~A~~Lgi~~~~Vlva 174 (421)
|-++=.+-.+++++.+.+.||++++.|.|.
T Consensus 69 ~~eqk~~l~~~i~~~l~~~lgi~~~~v~I~ 98 (115)
T 1uiz_A 69 GGPQNKSYTKLLCDILTKQLNIPANRVYIN 98 (115)
T ss_dssp SHHHHHHHHHHHHHHHHHHHCCCGGGEEEE
T ss_pred CHHHHHHHHHHHHHHHHHHhCcCcceEEEE
Confidence 457777889999999999999999999873
No 44
>2opa_A Probable tautomerase YWHB; homohexamer, 4-oxalocrotonate tautomerase, inhibitor, 2-FLUO hydroxycinnamate, isomerase; HET: FHC; 2.40A {Bacillus subtilis} PDB: 2op8_A*
Probab=22.74 E-value=52 Score=23.08 Aligned_cols=29 Identities=10% Similarity=0.071 Sum_probs=23.8
Q ss_pred cHHHHHHHHHHHHHHHHHhCCCCCcEEEe
Q 014620 146 GDAGYQDVVDCANTVAMLLKMRSEEVLIE 174 (421)
Q Consensus 146 G~~G~~da~~~a~~~A~~Lgi~~~~Vlva 174 (421)
-++=-+-++++++.+.+.||++++.|.|.
T Consensus 13 ~eqk~~l~~~i~~~l~~~lg~~~~~v~V~ 41 (61)
T 2opa_A 13 DEQKRNLVEKVTEAVKETTGASEEKIVVF 41 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCGGGCEEE
T ss_pred HHHHHHHHHHHHHHHHHHhCcCcCeEEEE
Confidence 35556678889999999999999998874
No 45
>2xcz_A Possible ATLS1-like light-inducible protein; cytokine, tautomerase, immune system, cyanobacterium; 1.64A {Prochlorococcus marinus}
Probab=22.73 E-value=75 Score=25.49 Aligned_cols=30 Identities=10% Similarity=0.117 Sum_probs=26.7
Q ss_pred CcHHHHHHHHHHHHHHHHHhCCCCCcEEEe
Q 014620 145 TGDAGYQDVVDCANTVAMLLKMRSEEVLIE 174 (421)
Q Consensus 145 TG~~G~~da~~~a~~~A~~Lgi~~~~Vlva 174 (421)
|-++=.+-.+++++.+.+.||++++.|.|.
T Consensus 69 t~eqk~~l~~~i~~~l~~~lgi~~~~v~I~ 98 (115)
T 2xcz_A 69 DGSRTQEVSELVCGHIEQNLGIPADRIYIG 98 (115)
T ss_dssp CTTHHHHHHHHHHHHHHHHHCCCGGGEEEE
T ss_pred CHHHHHHHHHHHHHHHHHHhCcCcccEEEE
Confidence 567778889999999999999999999873
No 46
>1xc0_A Pardaxin P-4, PA4; BEND-helix-BEND-helix motif, signaling protein; NMR {Synthetic} SCOP: j.6.1.1 PDB: 2kns_A
Probab=22.33 E-value=31 Score=23.10 Aligned_cols=12 Identities=33% Similarity=0.437 Sum_probs=10.2
Q ss_pred Hhhcchhhhhhh
Q 014620 364 SVASSSLVKAAV 375 (421)
Q Consensus 364 aVa~S~LVKtAi 375 (421)
.|+.|||+||-+
T Consensus 8 kiissplfktll 19 (33)
T 1xc0_A 8 KIISSPLFKTLL 19 (33)
T ss_dssp HHTTTTTHHHHH
T ss_pred HHHccHHHHHHH
Confidence 588999999865
No 47
>2jvf_A De novo protein M7; tetrapeptide fragment-based protein design, artificial fold; NMR {Unidentified} SCOP: k.41.1.1
Probab=21.25 E-value=2.5e+02 Score=22.54 Aligned_cols=54 Identities=22% Similarity=0.487 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCceEEEEEEeCCCCHHHHHHHHHHhhcchhhhhhhhCCCCChhHHHHhhcccCccc
Q 014620 318 QLQACLDAVMQGLAKSIAWDGEGATCLIEVRVTGANSEAEAAKIARSVASSSLVKAAVYGRDPNWGRIAAAAGYAGVSF 396 (421)
Q Consensus 318 ~F~~aL~~v~~~LAk~Iv~DGEGATKli~V~V~GA~s~~~A~~iAraVa~S~LVKtAi~G~DpNWGRIlaAvG~sg~~~ 396 (421)
+++.||.++-..||+ -| | +-+.|+++ |.++++|+.+-.-|+ |++.-+||-.+.+
T Consensus 30 eleralqelekalar----ag--a-rnvqitis-aendeqakellelia-----------------rllqklgykdinv 83 (96)
T 2jvf_A 30 ELERALQELEKALAR----AG--A-RNVQITIS-AENDEQAKELLELIA-----------------RLLQKLGYKDINV 83 (96)
T ss_dssp HHHHHHHHHHHHHHH----HT--C-SEEEEEEE-CSSHHHHHHHHHHHH-----------------HHHHHHTCSEEEE
T ss_pred HHHHHHHHHHHHHHh----cc--c-cceEEEEE-ecChHHHHHHHHHHH-----------------HHHHHhCCCceEE
Confidence 466777655555554 43 3 34677774 778999998776553 7788889875433
No 48
>3m21_A Probable tautomerase HP_0924; 4-oxalocrotonate tautomerase, catalytic proline, hexamer, BE beta, isomerase; 1.90A {Helicobacter pylori} PDB: 2orm_A
Probab=21.05 E-value=61 Score=23.70 Aligned_cols=30 Identities=10% Similarity=0.180 Sum_probs=24.3
Q ss_pred CcHHHHHHHHHHHHHHHHHhCCCCCcEEEe
Q 014620 145 TGDAGYQDVVDCANTVAMLLKMRSEEVLIE 174 (421)
Q Consensus 145 TG~~G~~da~~~a~~~A~~Lgi~~~~Vlva 174 (421)
|=++=-+-++++++.+.+.||++++.|.|.
T Consensus 15 s~eqK~~l~~~lt~~l~~~lg~p~~~v~V~ 44 (67)
T 3m21_A 15 TNEQKQQLIEGVSDLMVKVLNKNKASIVVI 44 (67)
T ss_dssp CHHHHHHHHHHHHHHHHHHHCCCGGGCEEE
T ss_pred CHHHHHHHHHHHHHHHHHHHCcCcccEEEE
Confidence 335556678889999999999999998874
No 49
>2os5_A Acemif; macrophage migration inhibitory factor, cytokine, nematode,; 1.60A {Ancylostoma ceylanicum} PDB: 3rf4_A* 3rf5_A*
Probab=21.03 E-value=82 Score=25.56 Aligned_cols=30 Identities=17% Similarity=0.265 Sum_probs=26.1
Q ss_pred CcHHHHHHHHHHHHHHHHHhCCCCCcEEEe
Q 014620 145 TGDAGYQDVVDCANTVAMLLKMRSEEVLIE 174 (421)
Q Consensus 145 TG~~G~~da~~~a~~~A~~Lgi~~~~Vlva 174 (421)
|-++=-+-.+++++.+.+.||++++.|.|.
T Consensus 69 ~~eqk~~l~~~i~~~l~~~lgi~~~~v~I~ 98 (119)
T 2os5_A 69 SADDNIRHTQKITQFCQDTLKLPKDKVIIT 98 (119)
T ss_dssp CHHHHHHHHHHHHHHHHHHHCCCGGGEEEE
T ss_pred CHHHHHHHHHHHHHHHHHHhCcCcccEEEE
Confidence 457777889999999999999999999874
No 50
>3djh_A Macrophage migration inhibitory factor; homotrimer, cytokine, inflammatory response, isomerase, phosphoprotein; 1.25A {Homo sapiens} SCOP: d.80.1.3 PDB: 1ca7_A* 1ljt_A* 2ooh_A* 2ooz_A* 3b9s_A* 2oow_A* 3ce4_A 3dji_A* 3ijg_A* 3ijj_A* 3smb_A* 3smc_A* 3u18_A* 4f2k_A* 1gd0_A* 1gcz_A* 3jsf_A* 3jsg_A* 3jtu_A* 3l5p_A* ...
Probab=20.85 E-value=84 Score=25.47 Aligned_cols=30 Identities=17% Similarity=0.149 Sum_probs=25.8
Q ss_pred CcHHHHHHHHHHHHHHHHHhCCCCCcEEEe
Q 014620 145 TGDAGYQDVVDCANTVAMLLKMRSEEVLIE 174 (421)
Q Consensus 145 TG~~G~~da~~~a~~~A~~Lgi~~~~Vlva 174 (421)
+.++=.+-+.++++.+.+.||++++.|.|.
T Consensus 68 ~~~~n~~~s~~i~~~l~~~Lgi~~~riyI~ 97 (114)
T 3djh_A 68 GGAQNRSYSKLLCGLLAERLRISPDRVYIN 97 (114)
T ss_dssp SHHHHHHHHHHHHHHHHHHHCCCGGGEEEE
T ss_pred CHHHHHHHHHHHHHHHHHHhCcCcceEEEE
Confidence 346677889999999999999999999873
No 51
>3fwu_A Macrophage migration inhibitory factor-like protein; homotrimer, tautomerase, cytokine; 1.80A {Leishmania major}
Probab=20.78 E-value=83 Score=26.64 Aligned_cols=29 Identities=0% Similarity=-0.040 Sum_probs=25.6
Q ss_pred cHHHHHHHHHHHHHHHHHhCCCCCcEEEe
Q 014620 146 GDAGYQDVVDCANTVAMLLKMRSEEVLIE 174 (421)
Q Consensus 146 G~~G~~da~~~a~~~A~~Lgi~~~~Vlva 174 (421)
.++=.+-+.++++.+.+.|||+++.|.|.
T Consensus 91 ~e~n~~~s~~i~~~l~~~LgI~~~riyI~ 119 (133)
T 3fwu_A 91 PSEPEKVTSIVTAAITKECGIVADRIFVL 119 (133)
T ss_dssp TTHHHHHHHHHHHHHHHHHCCCGGGEEEE
T ss_pred HHHHHHHHHHHHHHHHHHhCcChhhEEEE
Confidence 36777889999999999999999999874
No 52
>2z8u_A Tata-box-binding protein; transcription, DNA-binding protein, transcription factor, transcription regulation; 1.90A {Methanococcus jannaschii}
Probab=20.29 E-value=51 Score=30.15 Aligned_cols=92 Identities=13% Similarity=0.146 Sum_probs=55.9
Q ss_pred CCcEEEEEeCCCceEEEEecCCCccccchhchHhhcCCCCCeeEEEEecCCccccCcHHHHHHHHHHHHHHHHHh---CC
Q 014620 90 KPDVALVLCDVDAAAAGAFTTNVVAAAPVVYCKKTLDSSKTARAVLINAGQANAATGDAGYQDVVDCANTVAMLL---KM 166 (421)
Q Consensus 90 k~DLali~sd~pa~~AgvFT~N~~~AAPV~~~r~~l~~~~~~rAvvvNSGnANA~TG~~G~~da~~~a~~~A~~L---gi 166 (421)
+.||--|...-+- .-|-..+|++.=+. +. ..+..+.|-.||.- .|||.+-.++++.-++.+++.| |+
T Consensus 27 ~ldL~~ia~~~~n---~eY~P~~fpgli~R-----l~-~Pk~t~lIF~SGKi-v~TGAkS~e~a~~a~~~~~~~L~~lg~ 96 (188)
T 2z8u_A 27 NIDLEEVAMILEN---AEYEPEQFPGLVCR-----LS-VPKVALLIFRSGKV-NCTGAKSKEEAEIAIKKIIKELKDAGI 96 (188)
T ss_dssp SCCHHHHHHHSSC---CC-------CEEEE-----ET-TTTEEEEECTTSEE-EEEEESSHHHHHHHHHHHHHHHHHTTC
T ss_pred eeCHHHHHhhCCC---CEECCCCcccEEEE-----cC-CCcEEEEEeCCCeE-EEecCCCHHHHHHHHHHHHHHHHhcCC
Confidence 4566555443221 34666666663222 33 35677888888886 8999999999999999888665 65
Q ss_pred CC-C--c---EEEeccccCCcccChHHHHhh
Q 014620 167 RS-E--E---VLIESTGVIGQRIKKDALLNS 191 (421)
Q Consensus 167 ~~-~--~---VlvaSTGVIG~~Lpmdki~~~ 191 (421)
+. . + .=+.+|.-+|.+|.+++|...
T Consensus 97 ~~~~~~~~~I~NIVas~~l~~~i~L~~la~~ 127 (188)
T 2z8u_A 97 DVIENPEIKIQNMVATADLGIEPNLDDIALM 127 (188)
T ss_dssp CCCSSCCCEEEEEEEEEECSSCCCHHHHHHH
T ss_pred CccccCceEEEEEEEEEecCCccCHHHHHhh
Confidence 41 1 1 122366679999999988654
No 53
>1otf_A 4-oxalocrotonate tautomerase; isomerase; 1.90A {Pseudomonas SP} SCOP: d.80.1.1 PDB: 4otc_A 4ota_A 4otb_A 1bjp_A 2fm7_A
Probab=20.04 E-value=90 Score=21.80 Aligned_cols=30 Identities=17% Similarity=0.090 Sum_probs=24.5
Q ss_pred CcHHHHHHHHHHHHHHHHHhCCCCCcEEEe
Q 014620 145 TGDAGYQDVVDCANTVAMLLKMRSEEVLIE 174 (421)
Q Consensus 145 TG~~G~~da~~~a~~~A~~Lgi~~~~Vlva 174 (421)
|-++=-+-++++++.+.+.||+++++|.|.
T Consensus 12 s~e~k~~l~~~i~~~l~~~lg~p~~~v~v~ 41 (62)
T 1otf_A 12 TDEQKETLIRQVSEAMANSLDAPLERVRVL 41 (62)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTCCGGGCEEE
T ss_pred CHHHHHHHHHHHHHHHHHHhCcCcccEEEE
Confidence 345556678899999999999999998874
Done!