BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014621
(421 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q54R62|UCKC_DICDI Uridine-cytidine kinase C OS=Dictyostelium discoideum GN=udkC PE=3
SV=1
Length = 449
Score = 382 bits (981), Expect = e-105, Method: Compositional matrix adjust.
Identities = 185/366 (50%), Positives = 266/366 (72%), Gaps = 9/366 (2%)
Query: 22 QVQLVKKKDSD-RYEIVPIEDTLSFEKGFFIVIRACQLLAQKNHG-IILVGVAGPSGAGK 79
+++++ + D D RY I P++DTLSF+KGFF+ +RA Q + +K+ G +I+VG+AGPSGAGK
Sbjct: 5 EIEVIPRPDKDDRYTIKPLKDTLSFDKGFFLAVRAIQSIRKKSQGSVIVVGIAGPSGAGK 64
Query: 80 TVFTEKVLNFMPSIAVITMDNYNDSSR-IIDGNFDDPRLTDYDTLLENIRGLKEGKAVQV 138
T +K+++ +P +I++DNY DSSR II+ N+DD RL D++ L +NI L K +
Sbjct: 65 TSIAQKIVSVLPKSILISLDNYLDSSRQIIEENYDDYRLVDFELLKKNISDLISNKPTDL 124
Query: 139 PIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSEKLRPLIDLRVSVTGGVHFDLVKRVFR 198
P+YDF S R Y+ ++ P S++++IEGIYAL E++R L+DLRVS++GGVHFDL+KR+FR
Sbjct: 125 PLYDFTKSGRYAYKRVQPPESKVLLIEGIYALHEEIRHLLDLRVSISGGVHFDLIKRIFR 184
Query: 199 DIQRVGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKIINKFNPFTGFQNPTYILKSTR 258
D+ R GQ+P E + QI++TVYPMYKAFIEPDLQ A I+++NKFNPF G NP YILKS +
Sbjct: 185 DVHRTGQQPHESLQQITDTVYPMYKAFIEPDLQLAEIQVVNKFNPFGGLLNPIYILKSVK 244
Query: 259 P-VTVDEIKAVMSKEH-TETTEETYDIYLLPPG---EDPDACQSYLRMRNRDGKYNLMFE 313
VTVD I +V++K E T YDIYL+PP + +C ++R+RN DG+Y++MF
Sbjct: 245 QGVTVDMIHSVLNKSTIQENTARYYDIYLIPPNTTFANSSSC-DWIRVRNADGQYSIMFS 303
Query: 314 EWVTDSPFIISPRITFEVSVRLLGGLMALGYTIATILKRSSHIFYDDRVCVKTDWLEQLN 373
E + + PFIISPR+ F V V +LGGLM+LGY + I+ R S IF D ++ + D LE+L
Sbjct: 304 EEIKEGPFIISPRVDFVVGVNMLGGLMSLGYQMVAIIHRKSTIFKDGKIIISYDELEELG 363
Query: 374 RKYVQV 379
+ +VQ+
Sbjct: 364 QTFVQI 369
>sp|Q9GNF0|UCKD_DICDI Uridine-cytidine kinase D OS=Dictyostelium discoideum GN=udkD PE=2
SV=1
Length = 492
Score = 232 bits (592), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 130/393 (33%), Positives = 229/393 (58%), Gaps = 18/393 (4%)
Query: 3 QDTSSGADSPRRRPGLLRDQVQLVKKKDSDR--YEIVPIEDTLSFEKGFFIVIRACQLLA 60
D S +DS R +++ ++ + +S +EI + LSF++GFF RA ++L
Sbjct: 44 HDQSIESDSSFTREKQFEEELDILGEINSKTGLFEIKQVPYQLSFDQGFFHACRAIEILT 103
Query: 61 QKN-HGIILVGVAGPSGAGKTVFTEKVLNFMPSIAVITMDNYNDSSRIIDGNFDDPRLTD 119
+K+ II +G+AGP GAGKT K+ + + + +I++ ++ + D N+DDP L D
Sbjct: 104 EKDPKRIICLGIAGPVGAGKTTLANKIGSLVNGV-IISLQDFVKLENVKDNNYDDPVLID 162
Query: 120 YDTLLENIRGLKEGKAVQVP-IYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSEKLRPLI 178
+D ++ + LKE K V +P I + K SR ++ + +S+++I+EG YALS ++RPL+
Sbjct: 163 FDKVISTLNELKENKTVIIPKIVNRKMESR----SISLSTSKVIILEGAYALSARIRPLL 218
Query: 179 DLRVSVTGGVHFDLVKRVFRDIQRVGQE-PEEIIHQISETVYPMYKAFIEPDLQTAHIKI 237
D+ V++TGGVH DL+K + R I G+ ++++ QI+ V+PM+KAF+EPDL A IKI
Sbjct: 219 DISVAITGGVHLDLIKSIMRGIVTSGKNSSKDVLAQITNVVFPMFKAFVEPDLDQAKIKI 278
Query: 238 INKFNPFTGFQNPTYILKSTRPVTVDEIKAVMSKEHTETTEETY-DIYLLPPGEDPDAC- 295
+ FNP + P Y+ K+ +S + ++ + D+YL PP D
Sbjct: 279 HSSFNPMSQVVEPVYVCKAKYDNNKQFFDQFLSSLNVVPVKKNFSDMYLYPPKYGVDGIS 338
Query: 296 ----QSYLRMRNRD-GKYNLMFEEWVTDSPFIISPRITFEVSVRLLGGLMALGYTIATIL 350
++++R+R + G++N+ F + D P + FE+SV+ LGGL++LGY I IL
Sbjct: 339 QADKRNWIRIRRSEHGQFNITFYNEMMDGAVNTRPSLNFEISVKTLGGLLSLGYQIGAIL 398
Query: 351 KRSSHIFYD-DRVCVKTDWLEQLNRKYVQVLFH 382
R+ ++YD + V + +++++L + ++Q+ H
Sbjct: 399 NRTVEVWYDKNGVVITKEYIKELEKHFIQIKGH 431
>sp|Q9RXZ5|URK_DEIRA Uridine kinase OS=Deinococcus radiodurans (strain ATCC 13939 / DSM
20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 /
R1 / VKM B-1422) GN=udk PE=3 SV=1
Length = 210
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 104/200 (52%), Gaps = 15/200 (7%)
Query: 68 LVGVAGPSGAGKTVFTEKVLNFM--PSIAVITMDNY-NDSSRI-----IDGNFDDPRLTD 119
++GVAG SG+GKT T +V+ + +AV+ DNY D S I + N+D P D
Sbjct: 9 VIGVAGGSGSGKTTVTRRVIETVGREGVAVLNQDNYYRDQSDIPFESRLHTNYDHPAAFD 68
Query: 120 YDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYAL-SEKLRPLI 178
+ L E + L G +++P YDF +R + T +P R+V++EG +AL E+LR +
Sbjct: 69 WALLREQLDALLAGVPIEMPEYDFTQHTRAAHTTRVLPG-RVVVLEGFFALYDEELRSRM 127
Query: 179 DLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKII 238
L+V V ++R+ RD Q G+ PE +I Q V PM+ +F+EP + A + I
Sbjct: 128 GLKVFVDADADVRFIRRLLRDTQERGRTPESVIEQYLGFVRPMHLSFVEPTKRYADVII- 186
Query: 239 NKFNPFTGFQNPTYILKSTR 258
P G P + + R
Sbjct: 187 ----PHGGMNEPALDMLAAR 202
>sp|A7MVE7|URK_VIBHB Uridine kinase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120)
GN=udk PE=3 SV=1
Length = 213
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 102/186 (54%), Gaps = 14/186 (7%)
Query: 63 NHGIILVGVAGPSGAGKTVFTEKVLNFM------PSIAVITMDNY-NDSSRI-----IDG 110
N+ ++VG+AG S +GK++ + N + I VIT D Y ND S++ +
Sbjct: 4 NNQCVIVGIAGASASGKSLIASTIYNELREKVGDHQIGVITEDCYYNDQSQLSMEERVKT 63
Query: 111 NFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYAL 170
N+D P D+D L E++ L G+AV+VP Y + +R T P +++I+EGI L
Sbjct: 64 NYDHPSALDHDLLCEHLEKLVRGEAVEVPEYSYTEHTRTSNTTPMTPK-KVIILEGILLL 122
Query: 171 SE-KLRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAFIEPD 229
++ +LR L+ V + + L++RV RD++ G+ E ++ Q +TV PM+ FIEP
Sbjct: 123 TDPRLRDLMHATVFMDTPLDICLLRRVKRDVEERGRTMESVLKQYQQTVRPMFMQFIEPS 182
Query: 230 LQTAHI 235
Q A I
Sbjct: 183 KQYADI 188
>sp|C1CXN1|URK_DEIDV Uridine kinase OS=Deinococcus deserti (strain VCD115 / DSM 17065 /
LMG 22923) GN=udk PE=3 SV=1
Length = 207
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 104/200 (52%), Gaps = 15/200 (7%)
Query: 68 LVGVAGPSGAGKTVFTEKVLNFMPS--IAVITMDNY-NDSSRI-----IDGNFDDPRLTD 119
++GVAG SG+GKT T +V+ + ++V+ DNY D S I ++ N+D P D
Sbjct: 9 VIGVAGGSGSGKTTVTRRVIETVGGNGVSVLNQDNYYRDQSDIPFNARLNTNYDHPAAFD 68
Query: 120 YDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYAL-SEKLRPLI 178
+ L ++ L G + +P YDF +R + +P + +V++EG +AL E+LR +
Sbjct: 69 WPLLRSHLDALLSGVPIDMPEYDFTQHTRSAQASTVLPGA-VVVLEGFFALYDEELRERM 127
Query: 179 DLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKII 238
L+V V ++R+ RD Q G+ PE +I Q E V PM+ +F+EP + A + I
Sbjct: 128 HLKVFVDADADVRFIRRLLRDTQERGRTPESVIQQYLEYVRPMHLSFVEPTKRYADVII- 186
Query: 239 NKFNPFTGFQNPTYILKSTR 258
P G P + S R
Sbjct: 187 ----PHGGMNEPALDMLSAR 202
>sp|B5ZBE2|URK_UREU1 Uridine kinase OS=Ureaplasma urealyticum serovar 10 (strain ATCC
33699 / Western) GN=udk PE=3 SV=1
Length = 207
Score = 100 bits (248), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 104/182 (57%), Gaps = 11/182 (6%)
Query: 67 ILVGVAGPSGAGKTVFTEKVLNFMP---SIAVITMDNYNDSSRIIDGN------FDDPRL 117
ILV +AG SG+GKT F +++ +P + +I D+Y S+ ++ N +D P
Sbjct: 7 ILVLIAGASGSGKTTFANEIVARIPQNTTSVIICQDSYYISNSQLNKNERRLINYDHPSS 66
Query: 118 TDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYAL-SEKLRP 176
++D + E + +K+ K ++VPIYD+K+ R+ +T+++ +++ EGIYA+ + +
Sbjct: 67 FEWDLMREQLSDIKKRKKIKVPIYDYKTEIRLD-KTIDISDVDVIVFEGIYAIYDDVINQ 125
Query: 177 LIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIK 236
+ DL+V + L++R+ RD+ + E +I Q TV PMY F+EP + A++
Sbjct: 126 IADLKVFIETPKDECLIRRILRDVNERNRSFESVITQWRSTVSPMYDQFVEPSKKNANVS 185
Query: 237 II 238
++
Sbjct: 186 VL 187
>sp|Q9PQF9|URK_UREPA Uridine kinase OS=Ureaplasma parvum serovar 3 (strain ATCC 700970)
GN=udk PE=3 SV=1
Length = 207
Score = 98.6 bits (244), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 105/182 (57%), Gaps = 11/182 (6%)
Query: 67 ILVGVAGPSGAGKTVFTEKVLNFMP---SIAVITMDNYNDSSRIIDG------NFDDPRL 117
IL+ +AG SG+GKT F +++ +P + VI D+Y S+ ++ N+D P
Sbjct: 7 ILILIAGASGSGKTTFANEIIARIPKNTTSVVICQDSYYISNSQLNKKERRLINYDHPSS 66
Query: 118 TDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYAL-SEKLRP 176
+++ + E + +K+ K ++VPIYD+K+ R+ +T+++ ++++EGIYA+ + +
Sbjct: 67 FEWELMREQLSDIKKRKKIKVPIYDYKTEIRLD-KTIDISDVDVIVLEGIYAIYDDVINQ 125
Query: 177 LIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIK 236
+ DL++ + L++R+ RD+ + E +I Q TV PMY F+EP + A++
Sbjct: 126 IADLKIFIETPKDECLIRRILRDVNERNRSFESVITQWRSTVSPMYDQFVEPSKKNANVS 185
Query: 237 II 238
++
Sbjct: 186 VL 187
>sp|B1AIX1|URK_UREP2 Uridine kinase OS=Ureaplasma parvum serovar 3 (strain ATCC 27815 /
27 / NCTC 11736) GN=udk PE=3 SV=1
Length = 207
Score = 98.6 bits (244), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 105/182 (57%), Gaps = 11/182 (6%)
Query: 67 ILVGVAGPSGAGKTVFTEKVLNFMP---SIAVITMDNYNDSSRIIDG------NFDDPRL 117
IL+ +AG SG+GKT F +++ +P + VI D+Y S+ ++ N+D P
Sbjct: 7 ILILIAGASGSGKTTFANEIIARIPKNTTSVVICQDSYYISNSQLNKKERRLINYDHPSS 66
Query: 118 TDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYAL-SEKLRP 176
+++ + E + +K+ K ++VPIYD+K+ R+ +T+++ ++++EGIYA+ + +
Sbjct: 67 FEWELMREQLSDIKKRKKIKVPIYDYKTEIRLD-KTIDISDVDVIVLEGIYAIYDDVINQ 125
Query: 177 LIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIK 236
+ DL++ + L++R+ RD+ + E +I Q TV PMY F+EP + A++
Sbjct: 126 IADLKIFIETPKDECLIRRILRDVNERNRSFESVITQWRSTVSPMYDQFVEPSKKNANVS 185
Query: 237 II 238
++
Sbjct: 186 VL 187
>sp|Q9KDD8|URK_BACHD Uridine kinase OS=Bacillus halodurans (strain ATCC BAA-125 / DSM
18197 / FERM 7344 / JCM 9153 / C-125) GN=udk PE=3 SV=1
Length = 211
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 113/212 (53%), Gaps = 15/212 (7%)
Query: 67 ILVGVAGPSGAGKTVFTEKVLNFM--PSIAVITMDNY-NDSSRI-----IDGNFDDPRLT 118
I++GVAG +G+GKT +++ SI +I D Y D S++ + N+D P
Sbjct: 6 IIIGVAGGTGSGKTTVAKEIFYQFNEKSIVLIEQDAYYKDQSQLSLEERLQTNYDHPLAF 65
Query: 119 DYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALS-EKLRPL 177
D D L+E++ L G+A++ P+YD+K +R L P ++I+EGI L E+LR L
Sbjct: 66 DNDLLIEHLHSLLNGQAIEKPVYDYKLHTRSNEVILVEPKD-VIILEGILLLEDERLREL 124
Query: 178 IDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKI 237
+D+++ V +++R+ RDI+ G+ E +I Q ++ V PM+ FIEP + A + I
Sbjct: 125 MDIKLFVDTDADIRIIRRMVRDIRERGRTLESVIEQYTKVVRPMHMQFIEPTKRYADVII 184
Query: 238 INKFNPFTGFQNPTYILKSTRPVTVDEIKAVM 269
P G L T+ + E KAV+
Sbjct: 185 -----PEGGQNRVAIDLMVTKIRAIIEEKAVL 211
>sp|Q9KT67|URK_VIBCH Uridine kinase OS=Vibrio cholerae serotype O1 (strain ATCC 39315 /
El Tor Inaba N16961) GN=udk PE=3 SV=2
Length = 213
Score = 96.7 bits (239), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 103/187 (55%), Gaps = 14/187 (7%)
Query: 62 KNHGIILVGVAGPSGAGKTVFTEKVLNFMPS------IAVITMDNY-NDSSRI-----ID 109
+N+ ++VG+AG S +GK++ + N + + I VIT D Y D S + +
Sbjct: 3 ENNQCVIVGIAGASASGKSLIASTIYNELRAKVGDHQIGVITEDCYYKDQSHLSMEERVK 62
Query: 110 GNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYA 169
N+D P D+D L ++++ L G+AV+VP Y + +R T P +++I+EGI
Sbjct: 63 TNYDHPSALDHDLLCQHLQMLARGEAVEVPEYSYTEHTRTEQTTTMTPK-KVIILEGILL 121
Query: 170 LSE-KLRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAFIEP 228
L++ +LR L+ V + + L++RV RD+Q G+ E ++ Q ETV PM+ FIEP
Sbjct: 122 LTDPRLRDLMHATVFMDTPLDICLLRRVKRDVQERGRTMESVLKQYQETVRPMFMQFIEP 181
Query: 229 DLQTAHI 235
Q A I
Sbjct: 182 SKQYADI 188
>sp|B5FG51|URK_VIBFM Uridine kinase OS=Vibrio fischeri (strain MJ11) GN=udk PE=3 SV=1
Length = 215
Score = 96.7 bits (239), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 99/186 (53%), Gaps = 14/186 (7%)
Query: 63 NHGIILVGVAGPSGAGKTVFTEKVLNFMPS------IAVITMDNY-NDSSRI-----IDG 110
NH I+VG+AG S +GK++ + N + + I VIT D+Y D S + +
Sbjct: 6 NHHCIIVGIAGASASGKSLIASTIYNELRAKVGDHQIGVITEDSYYKDQSHLTMEERVKT 65
Query: 111 NFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYAL 170
N+D P D++ L E++ L G+AV +P Y + +R + P +++I+EGI L
Sbjct: 66 NYDHPNALDHELLCEHLEQLMRGEAVNIPTYSYTEHTRTSEVDVMTP-KKVIILEGILLL 124
Query: 171 SE-KLRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAFIEPD 229
++ +LR L+ V + + L++R RD++ G+ E + Q +TV PM+ FI+P
Sbjct: 125 TDPRLRNLMHASVFMDTPLDICLLRRARRDVEERGRTMESVFEQYQKTVRPMFMQFIDPS 184
Query: 230 LQTAHI 235
Q A I
Sbjct: 185 KQHADI 190
>sp|Q5E3Z9|URK_VIBF1 Uridine kinase OS=Vibrio fischeri (strain ATCC 700601 / ES114)
GN=udk PE=3 SV=1
Length = 215
Score = 96.7 bits (239), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 99/186 (53%), Gaps = 14/186 (7%)
Query: 63 NHGIILVGVAGPSGAGKTVFTEKVLNFMPS------IAVITMDNY-NDSSRI-----IDG 110
NH I+VG+AG S +GK++ + N + + I VIT D+Y D S + +
Sbjct: 6 NHHCIIVGIAGASASGKSLIASTIYNELRAKVGDHQIGVITEDSYYKDQSHLTMEERVKT 65
Query: 111 NFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYAL 170
N+D P D++ L E++ L G+AV +P Y + +R + P +++I+EGI L
Sbjct: 66 NYDHPNALDHELLCEHLEQLMRGEAVNIPTYSYTEHTRTSEVDVMTP-KKVIILEGILLL 124
Query: 171 SE-KLRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAFIEPD 229
++ +LR L+ V + + L++R RD++ G+ E + Q +TV PM+ FI+P
Sbjct: 125 TDPRLRNLMHASVFMDTPLDICLLRRARRDVEERGRTMESVFEQYQKTVRPMFMQFIDPS 184
Query: 230 LQTAHI 235
Q A I
Sbjct: 185 KQHADI 190
>sp|Q87N09|URK_VIBPA Uridine kinase OS=Vibrio parahaemolyticus serotype O3:K6 (strain
RIMD 2210633) GN=udk PE=3 SV=1
Length = 213
Score = 96.3 bits (238), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 102/186 (54%), Gaps = 14/186 (7%)
Query: 63 NHGIILVGVAGPSGAGKTVFTEKVLNFMPS------IAVITMDNY-NDSSRI-----IDG 110
N+ ++VG+AG S +GK++ + N + + I VIT D Y ND S + +
Sbjct: 4 NNQCVIVGIAGASASGKSLIASTIYNELRAKVGDHQIGVITEDCYYNDQSHLSMEERVKT 63
Query: 111 NFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYAL 170
N+D P D+D L E++ L G+AV+VP Y + +R T P +++I+EGI L
Sbjct: 64 NYDHPSALDHDLLCEHLEKLVRGEAVEVPEYSYTEHTRTSNTTTMTPK-KVIILEGILLL 122
Query: 171 SE-KLRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAFIEPD 229
++ +LR L+ V + + L++RV RD++ G+ E ++ Q +TV PM+ FIEP
Sbjct: 123 TDPRLRDLMHATVFMDTPLDICLLRRVKRDVEERGRTMESVLKQYQQTVRPMFMQFIEPS 182
Query: 230 LQTAHI 235
Q A I
Sbjct: 183 KQYADI 188
>sp|A0KKF8|URK_AERHH Uridine kinase OS=Aeromonas hydrophila subsp. hydrophila (strain
ATCC 7966 / NCIB 9240) GN=udk PE=3 SV=1
Length = 214
Score = 95.5 bits (236), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 104/190 (54%), Gaps = 14/190 (7%)
Query: 59 LAQKNHGIILVGVAGPSGAGKTVFTEKVLNFMPS------IAVITMDNY-NDSSRI---- 107
++ H +++G+AG S +GK++ + + + + I VIT D Y D + +
Sbjct: 1 MSDTQHSCVIIGIAGASASGKSLIAQTIYEELVAELGAGQIGVITEDCYYRDQTHLTMEE 60
Query: 108 -IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEG 166
+ N+D P D+D L++++ L +G AV +P Y + +R+ T P R++I+EG
Sbjct: 61 RVKTNYDHPNALDHDLLVQHLSQLVQGDAVNIPQYSYTEHTRMSEVTPFAPR-RVIILEG 119
Query: 167 IYALSE-KLRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAF 225
I L++ +LR L+D + + + L++R+ RD+Q G+ + ++ Q +TV PM+ F
Sbjct: 120 ILLLTDSRLRDLMDASIFMDTPLDICLLRRLVRDVQERGRTMDSVLKQYQKTVRPMFLQF 179
Query: 226 IEPDLQTAHI 235
IEP Q A +
Sbjct: 180 IEPSKQYADV 189
>sp|Q91YL3|UCKL1_MOUSE Uridine-cytidine kinase-like 1 OS=Mus musculus GN=Uckl1 PE=1 SV=1
Length = 548
Score = 95.5 bits (236), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 104/181 (57%), Gaps = 14/181 (7%)
Query: 69 VGVAGPSGAGKTVFTEKVLNFM--PSIAVITMDNY--------NDSSRIIDGNFDDPRLT 118
+G+ G S +GKT ++ + P + +++MD++ + + + NFD P
Sbjct: 101 IGLGGGSASGKTTVARMIIEALDVPWVVLLSMDSFYKVLTQQQQEQAACNNFNFDHPDAF 160
Query: 119 DYDTLLENIRGLKEGKAVQVPIYDFKSSSR-IGYRTLEVPSSRIVIIEGIYALSEK-LRP 176
D+D ++ ++ LK+G++VQVPIYDF + SR ++TL + ++I EGI A ++K L
Sbjct: 161 DFDLIISTLKKLKQGRSVQVPIYDFTTHSRKKDWKTLY--GANVIIFEGIMAFADKTLLE 218
Query: 177 LIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIK 236
L+D+++ V LV+R+ RDI G++ E +I Q ++ V P + +I+P ++ A I
Sbjct: 219 LLDMKIFVDTDSDIRLVRRLRRDISERGRDIEGVIKQYNKFVKPAFDQYIQPTMRLADIV 278
Query: 237 I 237
+
Sbjct: 279 V 279
>sp|P44533|URK_HAEIN Uridine kinase OS=Haemophilus influenzae (strain ATCC 51907 / DSM
11121 / KW20 / Rd) GN=udk PE=3 SV=1
Length = 213
Score = 95.5 bits (236), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 98/188 (52%), Gaps = 14/188 (7%)
Query: 63 NHGIILVGVAGPSGAGKTVFTEKVLNFMPS------IAVITMDNY-NDSSRI-----IDG 110
N I++ + G S +GK+ V + + I +IT D+Y D S + +
Sbjct: 3 NPSCIIIAITGASASGKSSIASTVHKELCNELGCQEIGIITEDSYYKDQSHLEMTERVKT 62
Query: 111 NFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYAL 170
N+D P D D L+++++ LK G AV VP+Y + +R T P RIVI+EGI L
Sbjct: 63 NYDHPNSMDRDLLIQHLKNLKNGSAVDVPVYSYVEHTRTNETTHFTP-KRIVILEGILLL 121
Query: 171 S-EKLRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAFIEPD 229
+ E++R L D+ V V + ++R+ RD++ G+ + +I Q TV PM+ FIEP
Sbjct: 122 TDERVRQLADISVFVDTPLDICFIRRLQRDMEERGRSLQSVIDQYRATVRPMFLQFIEPS 181
Query: 230 LQTAHIKI 237
Q A I I
Sbjct: 182 KQYADIVI 189
>sp|A5UFT8|URK_HAEIG Uridine kinase OS=Haemophilus influenzae (strain PittGG) GN=udk
PE=3 SV=1
Length = 213
Score = 95.5 bits (236), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 98/188 (52%), Gaps = 14/188 (7%)
Query: 63 NHGIILVGVAGPSGAGKTVFTEKVLNFMPS------IAVITMDNY-NDSSRI-----IDG 110
N I++ + G S +GK+ V + + I +IT D+Y D S + +
Sbjct: 3 NPSCIIIAITGASASGKSSIASTVHKELCNELGCQEIGIITEDSYYKDQSHLEMTERVKT 62
Query: 111 NFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYAL 170
N+D P D D L+++++ LK G AV VP+Y + +R T P RIVI+EGI L
Sbjct: 63 NYDHPNSMDRDLLIQHLKNLKNGSAVDVPVYSYVEHTRTNETTHFTP-KRIVILEGILLL 121
Query: 171 S-EKLRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAFIEPD 229
+ E++R L D+ V V + ++R+ RD++ G+ + +I Q TV PM+ FIEP
Sbjct: 122 TDERVRQLADISVFVDTPLDICFIRRLQRDMEERGRSLQSVIDQYRATVRPMFLQFIEPS 181
Query: 230 LQTAHIKI 237
Q A I I
Sbjct: 182 KQYADIVI 189
>sp|Q4QP55|URK_HAEI8 Uridine kinase OS=Haemophilus influenzae (strain 86-028NP) GN=udk
PE=3 SV=1
Length = 213
Score = 95.5 bits (236), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 98/188 (52%), Gaps = 14/188 (7%)
Query: 63 NHGIILVGVAGPSGAGKTVFTEKVLNFMPS------IAVITMDNY-NDSSRI-----IDG 110
N I++ + G S +GK+ V + + I +IT D+Y D S + +
Sbjct: 3 NPSCIIIAITGASASGKSSIASTVHKELCNELGCQEIGIITEDSYYKDQSHLEMTERVKT 62
Query: 111 NFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYAL 170
N+D P D D L+++++ LK G AV VP+Y + +R T P RIVI+EGI L
Sbjct: 63 NYDHPNSMDRDLLIQHLKNLKNGSAVDVPVYSYVEHTRTNETTHFTP-KRIVILEGILLL 121
Query: 171 S-EKLRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAFIEPD 229
+ E++R L D+ V V + ++R+ RD++ G+ + +I Q TV PM+ FIEP
Sbjct: 122 TDERVRQLADISVFVDTPLDICFIRRLQRDMEERGRSLQSVIDQYRATVRPMFLQFIEPS 181
Query: 230 LQTAHIKI 237
Q A I I
Sbjct: 182 KQYADIVI 189
>sp|A1S796|URK_SHEAM Uridine kinase OS=Shewanella amazonensis (strain ATCC BAA-1098 /
SB2B) GN=udk PE=3 SV=1
Length = 212
Score = 95.1 bits (235), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 99/182 (54%), Gaps = 14/182 (7%)
Query: 67 ILVGVAGPSGAGKTVFTEKVLNFM------PSIAVITMDNY-NDSSRI-----IDGNFDD 114
+++G+AG S +GK++ + + + I VI D Y D S + + N+D
Sbjct: 7 VIIGIAGASASGKSLIAKTIYEELCRDLGTDQIGVIAEDAYYRDQSHLSMEERVKTNYDH 66
Query: 115 PRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSE-K 173
P+ D++ L +++R LKEG +V++P+Y + +R+ P +++I+EGI L++
Sbjct: 67 PKAMDHELLAQHLRSLKEGDSVEIPVYSYTEHTRMSDTRTMTP-KKVIILEGILLLTDPH 125
Query: 174 LRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAFIEPDLQTA 233
LR L+D V + + ++R+ RD+ G+ E +I Q +TV PM+ FIEP Q A
Sbjct: 126 LRDLMDASVFMDTPLDICFLRRLTRDVAERGRTMESVISQYQKTVRPMFLQFIEPSKQYA 185
Query: 234 HI 235
I
Sbjct: 186 DI 187
>sp|B7VLX0|URK_VIBSL Uridine kinase OS=Vibrio splendidus (strain LGP32) GN=udk PE=3 SV=1
Length = 213
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 101/186 (54%), Gaps = 14/186 (7%)
Query: 63 NHGIILVGVAGPSGAGKTVFTEKVLNFM------PSIAVITMDNY-NDSSRI-----IDG 110
N+ ++VG+AG S +GK++ + N + I VIT D Y +D S + +
Sbjct: 4 NNQCVIVGIAGASASGKSLIASTIYNELREKVGDHQIGVITEDCYYSDQSHLSMEERVKT 63
Query: 111 NFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYAL 170
N+D P D+D L E+++ L G AV+VP Y + +R T P +++I+EGI L
Sbjct: 64 NYDHPNALDHDLLCEHLQQLMSGNAVEVPEYSYTEHTRTSETTTLTPK-KVIILEGILLL 122
Query: 171 SE-KLRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAFIEPD 229
++ +LR L+ V + + L++RV RD++ G+ + ++ Q ETV PM+ FIEP
Sbjct: 123 TDPRLRKLMHASVFMDTPLDICLLRRVKRDVEERGRTMDTVLKQYQETVRPMFMQFIEPS 182
Query: 230 LQTAHI 235
Q A I
Sbjct: 183 KQHADI 188
>sp|A4SML3|URK_AERS4 Uridine kinase OS=Aeromonas salmonicida (strain A449) GN=udk PE=3
SV=1
Length = 214
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 104/190 (54%), Gaps = 14/190 (7%)
Query: 59 LAQKNHGIILVGVAGPSGAGKTVFTEKVLNFMPS------IAVITMDNY-NDSSRI---- 107
++ H +++G+AG S +GK++ + + + + I VIT D Y D + +
Sbjct: 1 MSDTQHSCVIIGIAGASASGKSLIAQTIYEELVAELGAGQIGVITEDCYYRDQTHLTMEE 60
Query: 108 -IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEG 166
+ N+D P D+D L++++ L +G AV +P Y + +R+ T P R++I+EG
Sbjct: 61 RVKTNYDHPNALDHDLLVQHLSQLVKGDAVNIPQYSYTEHTRMNDVTPFAPR-RVIILEG 119
Query: 167 IYALSE-KLRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAF 225
I L++ +LR L+D + + + L++R+ RD+Q G+ + ++ Q +TV PM+ F
Sbjct: 120 ILLLTDSRLRDLMDASIFMDTPLDICLLRRLVRDVQERGRTMDSVLKQYQKTVRPMFLQF 179
Query: 226 IEPDLQTAHI 235
IEP Q A +
Sbjct: 180 IEPSKQYADV 189
>sp|C0ZAS6|URK_BREBN Uridine kinase OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC
100599) GN=udk PE=3 SV=1
Length = 214
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 107/201 (53%), Gaps = 15/201 (7%)
Query: 67 ILVGVAGPSGAGKTVFTEKVLNFMP--SIAVITMDNY-NDSSRIID-----GNFDDPRLT 118
+L+GVAG SG+GKT +++ S+ +I D+Y D S + N+D P
Sbjct: 5 VLIGVAGGSGSGKTTVAKELYRQFQNDSVTMIEQDSYYKDQSHLSPEERALTNYDHPFAF 64
Query: 119 DYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALS-EKLRPL 177
D D LL +++ L +GKA+Q PIYDFK +R ++V ++I+EG+ L E++R L
Sbjct: 65 DNDLLLAHLQELMQGKAIQKPIYDFKVHNR-KPEQIQVDPKDVIILEGMLILEDERIRNL 123
Query: 178 IDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKI 237
+D++V V + +R+ RDI+ G+ + ++ Q V PM+ FIEP + A + I
Sbjct: 124 MDIKVYVDTDADVRIARRIVRDIEERGRSLDSVVTQYLNVVRPMHLQFIEPTKRYADVII 183
Query: 238 INKFNPFTGFQNPTYILKSTR 258
P G+ L ST+
Sbjct: 184 -----PEGGYNRVALDLLSTK 199
>sp|B6EIY7|URK_ALISL Uridine kinase OS=Aliivibrio salmonicida (strain LFI1238) GN=udk
PE=3 SV=1
Length = 215
Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 98/186 (52%), Gaps = 14/186 (7%)
Query: 63 NHGIILVGVAGPSGAGKTVFTEKVLNFMPS------IAVITMDNY-NDSSRI-----IDG 110
NH I+VG+AG S +GK++ + N + + I VIT D+Y D S + +
Sbjct: 6 NHHCIIVGIAGASASGKSLIASTIYNELRAKVGDHQIGVITEDSYYKDQSHLTMEERVKT 65
Query: 111 NFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYAL 170
N+D P D+ L E++ L G+AV +P Y + +R + P +++I+EGI L
Sbjct: 66 NYDHPNALDHRLLSEHLEQLMRGEAVNIPTYSYTEHTRTSDVEVMTP-KKVIILEGILLL 124
Query: 171 SE-KLRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAFIEPD 229
++ +LR L+ V + + L++R RD++ G+ E + Q +TV PM+ FI+P
Sbjct: 125 TDPRLRNLMHASVFMDTPLDICLLRRAKRDVEERGRSMESVFEQYQKTVRPMFMQFIDPS 184
Query: 230 LQTAHI 235
Q A I
Sbjct: 185 KQHADI 190
>sp|Q7MM12|URK_VIBVY Uridine kinase OS=Vibrio vulnificus (strain YJ016) GN=udk PE=3 SV=2
Length = 213
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 101/182 (55%), Gaps = 14/182 (7%)
Query: 67 ILVGVAGPSGAGKTVFTEKVLNFMPS------IAVITMDNY-NDSSRI-----IDGNFDD 114
++VG+AG S +GK++ + N + + I VIT D Y ND S + + N+D
Sbjct: 8 VIVGIAGASASGKSLIASTIYNELRAKVGDHQIGVITEDCYYNDQSHLSMEERVKTNYDH 67
Query: 115 PRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSE-K 173
P D+D L E++ L +G++V+VP Y + +R T P +++I+EGI L++ +
Sbjct: 68 PNALDHDLLCEHLEKLMKGESVEVPEYSYTEHTRTENTTTMTPK-KVIILEGILLLTDPR 126
Query: 174 LRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAFIEPDLQTA 233
LR L+ V + + L++RV RD++ G+ E ++ Q +TV PM+ FIEP Q A
Sbjct: 127 LRDLMHATVFMDTPLDICLLRRVKRDVEERGRTMESVLKQYQKTVRPMFMQFIEPSKQYA 186
Query: 234 HI 235
I
Sbjct: 187 DI 188
>sp|Q8D8F4|URK_VIBVU Uridine kinase OS=Vibrio vulnificus (strain CMCP6) GN=udk PE=3 SV=1
Length = 213
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 101/182 (55%), Gaps = 14/182 (7%)
Query: 67 ILVGVAGPSGAGKTVFTEKVLNFMPS------IAVITMDNY-NDSSRI-----IDGNFDD 114
++VG+AG S +GK++ + N + + I VIT D Y ND S + + N+D
Sbjct: 8 VIVGIAGASASGKSLIASTIYNELRAKVGDHQIGVITEDCYYNDQSHLSMEERVKTNYDH 67
Query: 115 PRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSE-K 173
P D+D L E++ L +G++V+VP Y + +R T P +++I+EGI L++ +
Sbjct: 68 PNALDHDLLCEHLEKLMKGESVEVPEYSYTEHTRTENTTTMTPK-KVIILEGILLLTDPR 126
Query: 174 LRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAFIEPDLQTA 233
LR L+ V + + L++RV RD++ G+ E ++ Q +TV PM+ FIEP Q A
Sbjct: 127 LRDLMHATVFMDTPLDICLLRRVKRDVEERGRTMESVLKQYQKTVRPMFMQFIEPSKQYA 186
Query: 234 HI 235
I
Sbjct: 187 DI 188
>sp|B7LV30|URK_ESCF3 Uridine kinase OS=Escherichia fergusonii (strain ATCC 35469 / DSM
13698 / CDC 0568-73) GN=udk PE=3 SV=1
Length = 213
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 103/190 (54%), Gaps = 14/190 (7%)
Query: 59 LAQKNHGIILVGVAGPSGAGKTVFTEKVLNFM------PSIAVITMDNY-NDSSRI---- 107
+ ++H +++G+AG S +GK++ + + I VI D Y D S +
Sbjct: 1 MTDQSHQCVIIGIAGASASGKSLIASTLYRELREQVGDEHIGVIPEDCYYKDQSHLSMEE 60
Query: 108 -IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEG 166
+ N+D P D+ LLE+++ LK G A+ +P+Y + +R+ T++V +++I+EG
Sbjct: 61 RVKTNYDHPSAMDHSLLLEHLQALKRGSAIDLPVYSYVEHTRMK-ETVKVEPKKVIILEG 119
Query: 167 IYALSE-KLRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAF 225
I L++ +LR ++ + V + L++R+ RD+ G+ + ++ Q +TV PM+ F
Sbjct: 120 ILLLTDARLRDELNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQYQKTVRPMFLQF 179
Query: 226 IEPDLQTAHI 235
IEP Q A I
Sbjct: 180 IEPSKQYADI 189
>sp|B2VFR1|URK_ERWT9 Uridine kinase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99)
GN=udk PE=3 SV=1
Length = 213
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 105/190 (55%), Gaps = 14/190 (7%)
Query: 59 LAQKNHGIILVGVAGPSGAGKTVFTEKVLNFM------PSIAVITMDNY-NDSSRI---- 107
+A K+H ++VG+AG S +GK++ + + +I VI D Y D S +
Sbjct: 1 MADKSHQCVIVGIAGASASGKSLIASTLYREVRERVGDENIGVIPEDAYYKDQSHLTMEE 60
Query: 108 -IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEG 166
+ N+D P D+ LL++++ LK G+A+ +P+Y + +R +T+ + +++I+EG
Sbjct: 61 RVKTNYDHPSAMDHSLLLQHLQMLKAGQAIDLPVYSYVEHTRT-QKTIRLEPKKVIILEG 119
Query: 167 IYALSE-KLRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAF 225
I L++ +LR ++ + V + L++R+ RD+ G+ + ++ Q +TV PM+ F
Sbjct: 120 ILLLTDARLRQEMNFSIFVDTPLDICLMRRMKRDVNERGRSMDSVMAQYQKTVRPMFLQF 179
Query: 226 IEPDLQTAHI 235
IEP Q A I
Sbjct: 180 IEPSKQYADI 189
>sp|B1JPY6|URK_YERPY Uridine kinase OS=Yersinia pseudotuberculosis serotype O:3 (strain
YPIII) GN=udk PE=3 SV=1
Length = 213
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 102/190 (53%), Gaps = 14/190 (7%)
Query: 59 LAQKNHGIILVGVAGPSGAGKTVFTEKVLNFM------PSIAVITMDNY-NDSSRI---- 107
+ K H +++G+AG S +GK++ + + I VI D Y D S +
Sbjct: 1 MTDKAHQCVIIGIAGASASGKSLIASTLYRELREQVGDQHIGVIPEDGYYKDQSHLSMEE 60
Query: 108 -IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEG 166
+ N+D P D++ LLE+++ LK GK V++P+Y + +R T+ + +++I+EG
Sbjct: 61 RVKTNYDHPSAMDHNLLLEHLQALKAGKPVELPLYSYTEHTR-KKETVHLEPKKVIILEG 119
Query: 167 IYALSE-KLRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAF 225
I L++ +LR ++ + V + L++R+ RD+ G+ + ++ Q +TV PM+ F
Sbjct: 120 ILLLTDIRLRQEMNFSIFVDTPLDICLMRRMKRDVNERGRSMDSVMAQYQKTVRPMFLQF 179
Query: 226 IEPDLQTAHI 235
IEP Q A I
Sbjct: 180 IEPSKQYADI 189
>sp|Q66C70|URK_YERPS Uridine kinase OS=Yersinia pseudotuberculosis serotype I (strain
IP32953) GN=udk PE=3 SV=1
Length = 213
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 102/190 (53%), Gaps = 14/190 (7%)
Query: 59 LAQKNHGIILVGVAGPSGAGKTVFTEKVLNFM------PSIAVITMDNY-NDSSRI---- 107
+ K H +++G+AG S +GK++ + + I VI D Y D S +
Sbjct: 1 MTDKAHQCVIIGIAGASASGKSLIASTLYRELREQVGDQHIGVIPEDGYYKDQSHLSMEE 60
Query: 108 -IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEG 166
+ N+D P D++ LLE+++ LK GK V++P+Y + +R T+ + +++I+EG
Sbjct: 61 RVKTNYDHPSAMDHNLLLEHLQALKAGKPVELPLYSYTEHTR-KKETVHLEPKKVIILEG 119
Query: 167 IYALSE-KLRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAF 225
I L++ +LR ++ + V + L++R+ RD+ G+ + ++ Q +TV PM+ F
Sbjct: 120 ILLLTDIRLRQEMNFSIFVDTPLDICLMRRMKRDVNERGRSMDSVMAQYQKTVRPMFLQF 179
Query: 226 IEPDLQTAHI 235
IEP Q A I
Sbjct: 180 IEPSKQYADI 189
>sp|A4TKM7|URK_YERPP Uridine kinase OS=Yersinia pestis (strain Pestoides F) GN=udk PE=3
SV=1
Length = 213
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 102/190 (53%), Gaps = 14/190 (7%)
Query: 59 LAQKNHGIILVGVAGPSGAGKTVFTEKVLNFM------PSIAVITMDNY-NDSSRI---- 107
+ K H +++G+AG S +GK++ + + I VI D Y D S +
Sbjct: 1 MTDKAHQCVIIGIAGASASGKSLIASTLYRELREQVGDQHIGVIPEDGYYKDQSHLSMEE 60
Query: 108 -IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEG 166
+ N+D P D++ LLE+++ LK GK V++P+Y + +R T+ + +++I+EG
Sbjct: 61 RVKTNYDHPSAMDHNLLLEHLQALKAGKPVELPLYSYTEHTR-KKETVHLEPKKVIILEG 119
Query: 167 IYALSE-KLRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAF 225
I L++ +LR ++ + V + L++R+ RD+ G+ + ++ Q +TV PM+ F
Sbjct: 120 ILLLTDIRLRQEMNFSIFVDTPLDICLMRRMKRDVNERGRSMDSVMAQYQKTVRPMFLQF 179
Query: 226 IEPDLQTAHI 235
IEP Q A I
Sbjct: 180 IEPSKQYADI 189
>sp|Q1CGU6|URK_YERPN Uridine kinase OS=Yersinia pestis bv. Antiqua (strain Nepal516)
GN=udk PE=3 SV=1
Length = 213
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 102/190 (53%), Gaps = 14/190 (7%)
Query: 59 LAQKNHGIILVGVAGPSGAGKTVFTEKVLNFM------PSIAVITMDNY-NDSSRI---- 107
+ K H +++G+AG S +GK++ + + I VI D Y D S +
Sbjct: 1 MTDKAHQCVIIGIAGASASGKSLIASTLYRELREQVGDQHIGVIPEDGYYKDQSHLSMEE 60
Query: 108 -IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEG 166
+ N+D P D++ LLE+++ LK GK V++P+Y + +R T+ + +++I+EG
Sbjct: 61 RVKTNYDHPSAMDHNLLLEHLQALKAGKPVELPLYSYTEHTR-KKETVHLEPKKVIILEG 119
Query: 167 IYALSE-KLRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAF 225
I L++ +LR ++ + V + L++R+ RD+ G+ + ++ Q +TV PM+ F
Sbjct: 120 ILLLTDIRLRQEMNFSIFVDTPLDICLMRRMKRDVNERGRSMDSVMAQYQKTVRPMFLQF 179
Query: 226 IEPDLQTAHI 235
IEP Q A I
Sbjct: 180 IEPSKQYADI 189
>sp|A9R2M5|URK_YERPG Uridine kinase OS=Yersinia pestis bv. Antiqua (strain Angola)
GN=udk PE=3 SV=1
Length = 213
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 102/190 (53%), Gaps = 14/190 (7%)
Query: 59 LAQKNHGIILVGVAGPSGAGKTVFTEKVLNFM------PSIAVITMDNY-NDSSRI---- 107
+ K H +++G+AG S +GK++ + + I VI D Y D S +
Sbjct: 1 MTDKAHQCVIIGIAGASASGKSLIASTLYRELREQVGDQHIGVIPEDGYYKDQSHLSMEE 60
Query: 108 -IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEG 166
+ N+D P D++ LLE+++ LK GK V++P+Y + +R T+ + +++I+EG
Sbjct: 61 RVKTNYDHPSAMDHNLLLEHLQALKAGKPVELPLYSYTEHTR-KKETVHLEPKKVIILEG 119
Query: 167 IYALSE-KLRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAF 225
I L++ +LR ++ + V + L++R+ RD+ G+ + ++ Q +TV PM+ F
Sbjct: 120 ILLLTDIRLRQEMNFSIFVDTPLDICLMRRMKRDVNERGRSMDSVMAQYQKTVRPMFLQF 179
Query: 226 IEPDLQTAHI 235
IEP Q A I
Sbjct: 180 IEPSKQYADI 189
>sp|Q8ZFZ9|URK_YERPE Uridine kinase OS=Yersinia pestis GN=udk PE=3 SV=1
Length = 213
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 102/190 (53%), Gaps = 14/190 (7%)
Query: 59 LAQKNHGIILVGVAGPSGAGKTVFTEKVLNFM------PSIAVITMDNY-NDSSRI---- 107
+ K H +++G+AG S +GK++ + + I VI D Y D S +
Sbjct: 1 MTDKAHQCVIIGIAGASASGKSLIASTLYRELREQVGDQHIGVIPEDGYYKDQSHLSMEE 60
Query: 108 -IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEG 166
+ N+D P D++ LLE+++ LK GK V++P+Y + +R T+ + +++I+EG
Sbjct: 61 RVKTNYDHPSAMDHNLLLEHLQALKAGKPVELPLYSYTEHTR-KKETVHLEPKKVIILEG 119
Query: 167 IYALSE-KLRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAF 225
I L++ +LR ++ + V + L++R+ RD+ G+ + ++ Q +TV PM+ F
Sbjct: 120 ILLLTDIRLRQEMNFSIFVDTPLDICLMRRMKRDVNERGRSMDSVMAQYQKTVRPMFLQF 179
Query: 226 IEPDLQTAHI 235
IEP Q A I
Sbjct: 180 IEPSKQYADI 189
>sp|B2JZK5|URK_YERPB Uridine kinase OS=Yersinia pseudotuberculosis serotype IB (strain
PB1/+) GN=udk PE=3 SV=1
Length = 213
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 102/190 (53%), Gaps = 14/190 (7%)
Query: 59 LAQKNHGIILVGVAGPSGAGKTVFTEKVLNFM------PSIAVITMDNY-NDSSRI---- 107
+ K H +++G+AG S +GK++ + + I VI D Y D S +
Sbjct: 1 MTDKAHQCVIIGIAGASASGKSLIASTLYRELREQVGDQHIGVIPEDGYYKDQSHLSMEE 60
Query: 108 -IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEG 166
+ N+D P D++ LLE+++ LK GK V++P+Y + +R T+ + +++I+EG
Sbjct: 61 RVKTNYDHPSAMDHNLLLEHLQALKAGKPVELPLYSYTEHTR-KKETVHLEPKKVIILEG 119
Query: 167 IYALSE-KLRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAF 225
I L++ +LR ++ + V + L++R+ RD+ G+ + ++ Q +TV PM+ F
Sbjct: 120 ILLLTDIRLRQEMNFSIFVDTPLDICLMRRMKRDVNERGRSMDSVMAQYQKTVRPMFLQF 179
Query: 226 IEPDLQTAHI 235
IEP Q A I
Sbjct: 180 IEPSKQYADI 189
>sp|Q1C9T6|URK_YERPA Uridine kinase OS=Yersinia pestis bv. Antiqua (strain Antiqua)
GN=udk PE=3 SV=1
Length = 213
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 102/190 (53%), Gaps = 14/190 (7%)
Query: 59 LAQKNHGIILVGVAGPSGAGKTVFTEKVLNFM------PSIAVITMDNY-NDSSRI---- 107
+ K H +++G+AG S +GK++ + + I VI D Y D S +
Sbjct: 1 MTDKAHQCVIIGIAGASASGKSLIASTLYRELREQVGDQHIGVIPEDGYYKDQSHLSMEE 60
Query: 108 -IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEG 166
+ N+D P D++ LLE+++ LK GK V++P+Y + +R T+ + +++I+EG
Sbjct: 61 RVKTNYDHPSAMDHNLLLEHLQALKAGKPVELPLYSYTEHTR-KKETVHLEPKKVIILEG 119
Query: 167 IYALSE-KLRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAF 225
I L++ +LR ++ + V + L++R+ RD+ G+ + ++ Q +TV PM+ F
Sbjct: 120 ILLLTDIRLRQEMNFSIFVDTPLDICLMRRMKRDVNERGRSMDSVMAQYQKTVRPMFLQF 179
Query: 226 IEPDLQTAHI 235
IEP Q A I
Sbjct: 180 IEPSKQYADI 189
>sp|A7FJJ4|URK_YERP3 Uridine kinase OS=Yersinia pseudotuberculosis serotype O:1b (strain
IP 31758) GN=udk PE=3 SV=1
Length = 213
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 102/190 (53%), Gaps = 14/190 (7%)
Query: 59 LAQKNHGIILVGVAGPSGAGKTVFTEKVLNFM------PSIAVITMDNY-NDSSRI---- 107
+ K H +++G+AG S +GK++ + + I VI D Y D S +
Sbjct: 1 MTDKAHQCVIIGIAGASASGKSLIASTLYRELREQVGDQHIGVIPEDGYYKDQSHLSMEE 60
Query: 108 -IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEG 166
+ N+D P D++ LLE+++ LK GK V++P+Y + +R T+ + +++I+EG
Sbjct: 61 RVKTNYDHPSAMDHNLLLEHLQALKAGKPVELPLYSYTEHTR-KKETVHLEPKKVIILEG 119
Query: 167 IYALSE-KLRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAF 225
I L++ +LR ++ + V + L++R+ RD+ G+ + ++ Q +TV PM+ F
Sbjct: 120 ILLLTDIRLRQEMNFSIFVDTPLDICLMRRMKRDVNERGRSMDSVMAQYQKTVRPMFLQF 179
Query: 226 IEPDLQTAHI 235
IEP Q A I
Sbjct: 180 IEPSKQYADI 189
>sp|B7GIU0|URK_ANOFW Uridine kinase OS=Anoxybacillus flavithermus (strain DSM 21510 /
WK1) GN=udk PE=3 SV=1
Length = 211
Score = 93.2 bits (230), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 107/212 (50%), Gaps = 15/212 (7%)
Query: 67 ILVGVAGPSGAGKTVFTEKVLNFMPSIAVITMDN---YNDSSRI-----IDGNFDDPRLT 118
+++GVAG SG+GKT T+ + +++ ++ Y D S + + N+D P
Sbjct: 6 VVIGVAGGSGSGKTTVTKAIYEHFQGHSILMLEQDFYYKDQSHLPFEERLKTNYDHPLAF 65
Query: 119 DYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALS-EKLRPL 177
D D L+E+I L + + P+YD+ +R + V ++I+EGI L E+LR L
Sbjct: 66 DNDLLIEHIHKLLNYEPIDKPVYDYTLHTR-SNEVIRVEPKDVIILEGILVLEDERLRNL 124
Query: 178 IDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKI 237
+D++V V +++R+ RDI+ G+ E +I Q V PM+ FIEP + A I I
Sbjct: 125 MDIKVYVDTDADIRIIRRLLRDIKERGRTLESVIEQYVNVVRPMHNQFIEPTKRYADIII 184
Query: 238 INKFNPFTGFQNPTYILKSTRPVTVDEIKAVM 269
P G + L T+ T+ E +++
Sbjct: 185 -----PEGGHNHVAIDLMVTKIQTILEQNSIL 211
>sp|Q9NWZ5|UCKL1_HUMAN Uridine-cytidine kinase-like 1 OS=Homo sapiens GN=UCKL1 PE=1 SV=2
Length = 548
Score = 93.2 bits (230), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 103/179 (57%), Gaps = 14/179 (7%)
Query: 69 VGVAGPSGAGKTVFTEKVLNFM--PSIAVITMDNY--------NDSSRIIDGNFDDPRLT 118
+G+ G S +GKT ++ + P + +++MD++ + + + NFD P
Sbjct: 101 IGLGGGSASGKTTVARMIIEALDVPWVVLLSMDSFYKVLTEQQQEQAAHNNFNFDHPDAF 160
Query: 119 DYDTLLENIRGLKEGKAVQVPIYDFKSSSR-IGYRTLEVPSSRIVIIEGIYALSEK-LRP 176
D+D ++ ++ LK+GK+V+VPIYDF + SR ++TL + ++I EGI A ++K L
Sbjct: 161 DFDLIISTLKKLKQGKSVKVPIYDFTTHSRKKDWKTLY--GANVIIFEGIMAFADKTLLE 218
Query: 177 LIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAFIEPDLQTAHI 235
L+D+++ V LV+R+ RDI G++ E +I Q ++ V P + +I+P ++ A I
Sbjct: 219 LLDMKIFVDTDSDIRLVRRLRRDISERGRDIEGVIKQYNKFVKPSFDQYIQPTMRLADI 277
>sp|A9L4F4|URK_SHEB9 Uridine kinase OS=Shewanella baltica (strain OS195) GN=udk PE=3
SV=1
Length = 212
Score = 92.8 bits (229), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 98/182 (53%), Gaps = 14/182 (7%)
Query: 67 ILVGVAGPSGAGKTVFTEKVLNFM------PSIAVITMDNY-NDSSRI-----IDGNFDD 114
+++ +AG S +GK++ + + + + I VI D Y D S + + N+D
Sbjct: 7 VIIAIAGASASGKSLIAKTIFDELRRDLGTDQIGVINEDAYYRDQSHLSMDERVLTNYDH 66
Query: 115 PRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSE-K 173
P+ D+ L +++ LK G+AV +P Y + +RI TL + +++I+EGI L++ K
Sbjct: 67 PKALDHQLLCTHLQLLKSGEAVDIPCYSYTEHTRIA-ETLTMTPKKVIILEGILLLTDPK 125
Query: 174 LRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAFIEPDLQTA 233
LR L+D V + + ++R+ RD+ G+ E +I Q +TV PM+ FIEP Q A
Sbjct: 126 LRALMDASVFMDTPLDICFLRRLTRDVAERGRTMESVISQYKKTVRPMFLQFIEPSKQYA 185
Query: 234 HI 235
I
Sbjct: 186 DI 187
>sp|A6WP54|URK_SHEB8 Uridine kinase OS=Shewanella baltica (strain OS185) GN=udk PE=3
SV=1
Length = 212
Score = 92.8 bits (229), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 98/182 (53%), Gaps = 14/182 (7%)
Query: 67 ILVGVAGPSGAGKTVFTEKVLNFM------PSIAVITMDNY-NDSSRI-----IDGNFDD 114
+++ +AG S +GK++ + + + + I VI D Y D S + + N+D
Sbjct: 7 VIIAIAGASASGKSLIAKTIFDELRRDLGTDQIGVINEDAYYRDQSHLSMDERVLTNYDH 66
Query: 115 PRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSE-K 173
P+ D+ L +++ LK G+AV +P Y + +RI TL + +++I+EGI L++ K
Sbjct: 67 PKALDHQLLCTHLQLLKSGEAVDIPCYSYTEHTRIA-ETLTMTPKKVIILEGILLLTDPK 125
Query: 174 LRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAFIEPDLQTA 233
LR L+D V + + ++R+ RD+ G+ E +I Q +TV PM+ FIEP Q A
Sbjct: 126 LRALMDASVFMDTPLDICFLRRLTRDVAERGRTMESVISQYKKTVRPMFLQFIEPSKQYA 185
Query: 234 HI 235
I
Sbjct: 186 DI 187
>sp|B8E960|URK_SHEB2 Uridine kinase OS=Shewanella baltica (strain OS223) GN=udk PE=3
SV=1
Length = 212
Score = 92.8 bits (229), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 98/182 (53%), Gaps = 14/182 (7%)
Query: 67 ILVGVAGPSGAGKTVFTEKVLNFM------PSIAVITMDNY-NDSSRI-----IDGNFDD 114
+++ +AG S +GK++ + + + + I VI D Y D S + + N+D
Sbjct: 7 VIIAIAGASASGKSLIAKTIFDELRRDLGTDQIGVINEDAYYRDQSHLSMDERVLTNYDH 66
Query: 115 PRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSE-K 173
P+ D+ L +++ LK G+AV +P Y + +RI TL + +++I+EGI L++ K
Sbjct: 67 PKALDHQLLCTHLQLLKSGEAVDIPCYSYTEHTRIA-ETLTMTPKKVIILEGILLLTDPK 125
Query: 174 LRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAFIEPDLQTA 233
LR L+D V + + ++R+ RD+ G+ E +I Q +TV PM+ FIEP Q A
Sbjct: 126 LRALMDASVFMDTPLDICFLRRLTRDVAERGRTMESVISQYKKTVRPMFLQFIEPSKQYA 185
Query: 234 HI 235
I
Sbjct: 186 DI 187
>sp|P0A8F7|URK_SHIFL Uridine kinase OS=Shigella flexneri GN=udk PE=3 SV=1
Length = 213
Score = 92.8 bits (229), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 102/190 (53%), Gaps = 14/190 (7%)
Query: 59 LAQKNHGIILVGVAGPSGAGKTVFTEKVLNFM------PSIAVITMDNY-NDSSRI---- 107
+ ++H +++G+AG S +GK++ + + I VI D Y D S +
Sbjct: 1 MTDQSHQCVIIGIAGASASGKSLIASTLYRELREQVGDEHIGVIPEDCYYKDQSHLSMEE 60
Query: 108 -IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEG 166
+ N+D P D+ LLE+++ LK G A+ +P+Y + +R+ T+ V +++I+EG
Sbjct: 61 RVKTNYDHPSAMDHSLLLEHLQALKRGSAIDLPVYSYVEHTRMK-ETVTVEPKKVIILEG 119
Query: 167 IYALSE-KLRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAF 225
I L++ +LR ++ + V + L++R+ RD+ G+ + ++ Q +TV PM+ F
Sbjct: 120 ILLLTDARLRDELNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQYQKTVRPMFLQF 179
Query: 226 IEPDLQTAHI 235
IEP Q A I
Sbjct: 180 IEPSKQYADI 189
>sp|P0A8F4|URK_ECOLI Uridine kinase OS=Escherichia coli (strain K12) GN=udk PE=3 SV=1
Length = 213
Score = 92.8 bits (229), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 102/190 (53%), Gaps = 14/190 (7%)
Query: 59 LAQKNHGIILVGVAGPSGAGKTVFTEKVLNFM------PSIAVITMDNY-NDSSRI---- 107
+ ++H +++G+AG S +GK++ + + I VI D Y D S +
Sbjct: 1 MTDQSHQCVIIGIAGASASGKSLIASTLYRELREQVGDEHIGVIPEDCYYKDQSHLSMEE 60
Query: 108 -IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEG 166
+ N+D P D+ LLE+++ LK G A+ +P+Y + +R+ T+ V +++I+EG
Sbjct: 61 RVKTNYDHPSAMDHSLLLEHLQALKRGSAIDLPVYSYVEHTRMK-ETVTVEPKKVIILEG 119
Query: 167 IYALSE-KLRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAF 225
I L++ +LR ++ + V + L++R+ RD+ G+ + ++ Q +TV PM+ F
Sbjct: 120 ILLLTDARLRDELNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQYQKTVRPMFLQF 179
Query: 226 IEPDLQTAHI 235
IEP Q A I
Sbjct: 180 IEPSKQYADI 189
>sp|P0A8F5|URK_ECOL6 Uridine kinase OS=Escherichia coli O6:H1 (strain CFT073 / ATCC
700928 / UPEC) GN=udk PE=3 SV=1
Length = 213
Score = 92.8 bits (229), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 102/190 (53%), Gaps = 14/190 (7%)
Query: 59 LAQKNHGIILVGVAGPSGAGKTVFTEKVLNFM------PSIAVITMDNY-NDSSRI---- 107
+ ++H +++G+AG S +GK++ + + I VI D Y D S +
Sbjct: 1 MTDQSHQCVIIGIAGASASGKSLIASTLYRELREQVGDEHIGVIPEDCYYKDQSHLSMEE 60
Query: 108 -IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEG 166
+ N+D P D+ LLE+++ LK G A+ +P+Y + +R+ T+ V +++I+EG
Sbjct: 61 RVKTNYDHPSAMDHSLLLEHLQALKRGSAIDLPVYSYVEHTRMK-ETVTVEPKKVIILEG 119
Query: 167 IYALSE-KLRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAF 225
I L++ +LR ++ + V + L++R+ RD+ G+ + ++ Q +TV PM+ F
Sbjct: 120 ILLLTDARLRDELNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQYQKTVRPMFLQF 179
Query: 226 IEPDLQTAHI 235
IEP Q A I
Sbjct: 180 IEPSKQYADI 189
>sp|P0A8F6|URK_ECO57 Uridine kinase OS=Escherichia coli O157:H7 GN=udk PE=3 SV=1
Length = 213
Score = 92.8 bits (229), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 102/190 (53%), Gaps = 14/190 (7%)
Query: 59 LAQKNHGIILVGVAGPSGAGKTVFTEKVLNFM------PSIAVITMDNY-NDSSRI---- 107
+ ++H +++G+AG S +GK++ + + I VI D Y D S +
Sbjct: 1 MTDQSHQCVIIGIAGASASGKSLIASTLYRELREQVGDEHIGVIPEDCYYKDQSHLSMEE 60
Query: 108 -IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEG 166
+ N+D P D+ LLE+++ LK G A+ +P+Y + +R+ T+ V +++I+EG
Sbjct: 61 RVKTNYDHPSAMDHSLLLEHLQALKRGSAIDLPVYSYVEHTRMK-ETVTVEPKKVIILEG 119
Query: 167 IYALSE-KLRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAF 225
I L++ +LR ++ + V + L++R+ RD+ G+ + ++ Q +TV PM+ F
Sbjct: 120 ILLLTDARLRDELNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQYQKTVRPMFLQF 179
Query: 226 IEPDLQTAHI 235
IEP Q A I
Sbjct: 180 IEPSKQYADI 189
>sp|A1JTX4|URK_YERE8 Uridine kinase OS=Yersinia enterocolitica serotype O:8 / biotype 1B
(strain 8081) GN=udk PE=3 SV=1
Length = 213
Score = 92.8 bits (229), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 102/190 (53%), Gaps = 14/190 (7%)
Query: 59 LAQKNHGIILVGVAGPSGAGKTVFTEKVLNFM------PSIAVITMDNY-NDSSRI---- 107
+ K H +++G+AG S +GK++ + + I VI D Y D S +
Sbjct: 1 MTDKAHQCVIIGIAGASASGKSLIASTLYRELREQVGDQHIGVIPEDGYYKDQSHLSMEE 60
Query: 108 -IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEG 166
+ N+D P D++ LLE+++ LK GK +++P+Y + +R T+ + +++I+EG
Sbjct: 61 RVKTNYDHPSAMDHNLLLEHLQSLKAGKPIELPLYSYTEHTR-KKETVHLEPKKVIILEG 119
Query: 167 IYALSE-KLRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAF 225
I L++ +LR ++ + V + L++R+ RD+ G+ + ++ Q +TV PM+ F
Sbjct: 120 ILLLTDIRLRQEMNFSIFVDTPLDICLMRRMKRDVNERGRSMDSVMAQYQKTVRPMFLQF 179
Query: 226 IEPDLQTAHI 235
IEP Q A I
Sbjct: 180 IEPSKQYADI 189
>sp|B5BF73|URK_SALPK Uridine kinase OS=Salmonella paratyphi A (strain AKU_12601) GN=udk
PE=3 SV=1
Length = 213
Score = 92.8 bits (229), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 103/190 (54%), Gaps = 14/190 (7%)
Query: 59 LAQKNHGIILVGVAGPSGAGKTVFTEKVLNFM------PSIAVITMDNY-NDSSRI---- 107
+ ++H +++G+AG S +GK++ + + I VI D+Y D S +
Sbjct: 1 MTDQSHQCVIIGIAGASASGKSLIASTLYRELREQVGDEHIGVIPEDSYYKDQSHLSMEE 60
Query: 108 -IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEG 166
+ N+D P D+ L ++++ LK G A+++P+Y + +R+ T+ V +++I+EG
Sbjct: 61 RVKTNYDHPNAMDHSLLFQHLQALKRGSAIELPVYSYVEHTRM-QETVRVEPKKVIILEG 119
Query: 167 IYALSE-KLRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAF 225
I L++ +LR ++ + V + L++R+ RD+ G+ + ++ Q +TV PM+ F
Sbjct: 120 ILLLTDARLREEMNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQYQKTVRPMFLQF 179
Query: 226 IEPDLQTAHI 235
IEP Q A I
Sbjct: 180 IEPSKQYADI 189
>sp|Q5PDX6|URK_SALPA Uridine kinase OS=Salmonella paratyphi A (strain ATCC 9150 /
SARB42) GN=udk PE=3 SV=1
Length = 213
Score = 92.8 bits (229), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 103/190 (54%), Gaps = 14/190 (7%)
Query: 59 LAQKNHGIILVGVAGPSGAGKTVFTEKVLNFM------PSIAVITMDNY-NDSSRI---- 107
+ ++H +++G+AG S +GK++ + + I VI D+Y D S +
Sbjct: 1 MTDQSHQCVIIGIAGASASGKSLIASTLYRELREQVGDEHIGVIPEDSYYKDQSHLSMEE 60
Query: 108 -IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEG 166
+ N+D P D+ L ++++ LK G A+++P+Y + +R+ T+ V +++I+EG
Sbjct: 61 RVKTNYDHPNAMDHSLLFQHLQALKRGSAIELPVYSYVEHTRM-QETVRVEPKKVIILEG 119
Query: 167 IYALSE-KLRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAF 225
I L++ +LR ++ + V + L++R+ RD+ G+ + ++ Q +TV PM+ F
Sbjct: 120 ILLLTDARLREEMNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQYQKTVRPMFLQF 179
Query: 226 IEPDLQTAHI 235
IEP Q A I
Sbjct: 180 IEPSKQYADI 189
>sp|P67408|URK_SALTY Uridine kinase OS=Salmonella typhimurium (strain LT2 / SGSC1412 /
ATCC 700720) GN=udk PE=3 SV=1
Length = 213
Score = 92.4 bits (228), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 103/190 (54%), Gaps = 14/190 (7%)
Query: 59 LAQKNHGIILVGVAGPSGAGKTVFTEKVLNFM------PSIAVITMDNY-NDSSRI---- 107
+ ++H +++G+AG S +GK++ + + I VI D+Y D S +
Sbjct: 1 MTDQSHQCVIIGIAGASASGKSLIASTLYRELREQVGDEHIGVIPEDSYYKDQSHLSMEE 60
Query: 108 -IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEG 166
+ N+D P D+ L ++++ LK G A+++P+Y + +R+ T+ V +++I+EG
Sbjct: 61 RVKTNYDHPNAMDHSLLFQHLQALKRGSAIELPVYSYVEHTRM-QETVRVEPKKVIILEG 119
Query: 167 IYALSE-KLRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAF 225
I L++ +LR ++ + V + L++R+ RD+ G+ + ++ Q +TV PM+ F
Sbjct: 120 ILLLTDARLREEMNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQYQKTVRPMFLQF 179
Query: 226 IEPDLQTAHI 235
IEP Q A I
Sbjct: 180 IEPSKQYADI 189
>sp|P67409|URK_SALTI Uridine kinase OS=Salmonella typhi GN=udk PE=3 SV=1
Length = 213
Score = 92.4 bits (228), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 103/190 (54%), Gaps = 14/190 (7%)
Query: 59 LAQKNHGIILVGVAGPSGAGKTVFTEKVLNFM------PSIAVITMDNY-NDSSRI---- 107
+ ++H +++G+AG S +GK++ + + I VI D+Y D S +
Sbjct: 1 MTDQSHQCVIIGIAGASASGKSLIASTLYRELREQVGDEHIGVIPEDSYYKDQSHLSMEE 60
Query: 108 -IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEG 166
+ N+D P D+ L ++++ LK G A+++P+Y + +R+ T+ V +++I+EG
Sbjct: 61 RVKTNYDHPNAMDHSLLFQHLQALKRGSAIELPVYSYVEHTRM-QETVRVEPKKVIILEG 119
Query: 167 IYALSE-KLRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAF 225
I L++ +LR ++ + V + L++R+ RD+ G+ + ++ Q +TV PM+ F
Sbjct: 120 ILLLTDARLREEMNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQYQKTVRPMFLQF 179
Query: 226 IEPDLQTAHI 235
IEP Q A I
Sbjct: 180 IEPSKQYADI 189
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.140 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 161,153,657
Number of Sequences: 539616
Number of extensions: 6919006
Number of successful extensions: 24323
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 257
Number of HSP's successfully gapped in prelim test: 171
Number of HSP's that attempted gapping in prelim test: 23650
Number of HSP's gapped (non-prelim): 470
length of query: 421
length of database: 191,569,459
effective HSP length: 120
effective length of query: 301
effective length of database: 126,815,539
effective search space: 38171477239
effective search space used: 38171477239
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 63 (28.9 bits)