BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014623
(421 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 222 bits (566), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 131/327 (40%), Positives = 191/327 (58%), Gaps = 20/327 (6%)
Query: 46 KEKGNSESLPTPKSEGEILSSSNLKAFTFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQ 105
++K P E + LK F+ EL+ A+ NF ++LG GGFG VYKG
Sbjct: 2 RKKPQDHFFDVPAEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKG---- 57
Query: 106 HSLSPAKPGSGMVVAVKKLKPEGFQGHK-EWLTEVNYLGQLHHPNLVKLIGYCLEGENRL 164
+ G +VAVK+LK E QG + ++ TEV + H NL++L G+C+ RL
Sbjct: 58 ------RLADGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERL 111
Query: 165 LVYEFMPKGSLENHLFRRGPQ---PLSWAVRMKVAIGAAKGLTFLHD-AESQVIYRDFKA 220
LVY +M GS+ + L R P+ PL W R ++A+G+A+GL +LHD + ++I+RD KA
Sbjct: 112 LVYPYMANGSVASCL-RERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKA 170
Query: 221 SNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSF 280
+NILLD EF A + DFGLAK D HV V GT G+ APEY++TG+ + K+DV+ +
Sbjct: 171 ANILLDEEFEAVVGDFGLAKLMDYKD-XHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGY 229
Query: 281 GVVLLELLSGRCAVDKTKVGIEQS--LVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHT 338
GV+LLEL++G+ A D ++ + L+DW K L +K KL ++D L G Y +
Sbjct: 230 GVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK-KLEALVDVDLQGNYKDEEVEQ 288
Query: 339 AATLALQCLNNEPKLRPRMSEVLAILE 365
+AL C + P RP+MSEV+ +LE
Sbjct: 289 LIQVALLCTQSSPMERPKMSEVVRMLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 219 bits (559), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 129/319 (40%), Positives = 187/319 (58%), Gaps = 20/319 (6%)
Query: 54 LPTPKSEGEILSSSNLKAFTFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKP 113
P E + LK F+ EL+ A+ NF ++LG GGFG VYKG +
Sbjct: 2 FDVPAEEDPEVHLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKG----------RL 51
Query: 114 GSGMVVAVKKLKPEGFQGHK-EWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPK 172
G +VAVK+LK E QG + ++ TEV + H NL++L G+C+ RLLVY +M
Sbjct: 52 ADGXLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMAN 111
Query: 173 GSLENHLFRRGPQ---PLSWAVRMKVAIGAAKGLTFLHD-AESQVIYRDFKASNILLDAE 228
GS+ + L R P+ PL W R ++A+G+A+GL +LHD + ++I+RD KA+NILLD E
Sbjct: 112 GSVASCL-RERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEE 170
Query: 229 FNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELL 288
F A + DFGLAK D HV V G G+ APEY++TG+ + K+DV+ +GV+LLEL+
Sbjct: 171 FEAVVGDFGLAKLMDYKD-XHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELI 229
Query: 289 SGRCAVDKTKVGIEQS--LVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQC 346
+G+ A D ++ + L+DW K L +K KL ++D L G Y + +AL C
Sbjct: 230 TGQRAFDLARLANDDDVMLLDWVKGLLKEK-KLEALVDVDLQGNYKDEEVEQLIQVALLC 288
Query: 347 LNNEPKLRPRMSEVLAILE 365
+ P RP+MSEV+ +LE
Sbjct: 289 TQSSPMERPKMSEVVRMLE 307
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 193 bits (490), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 116/313 (37%), Positives = 188/313 (60%), Gaps = 20/313 (6%)
Query: 64 LSSSNLKAFTFNELKTATRNF--RPDSL----LGEGGFGFVYKGWIDQHSLSPAKPGSGM 117
+S + +F+F ELK T NF RP S+ +GEGGFG VYKG+++ +++ K + +
Sbjct: 7 VSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMV 66
Query: 118 VVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 177
+ ++LK +++ E+ + + H NLV+L+G+ +G++ LVY +MP GSL +
Sbjct: 67 DITTEELK-------QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLD 119
Query: 178 HL-FRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 236
L G PLSW +R K+A GAA G+ FLH E+ I+RD K++NILLD F AK+SDF
Sbjct: 120 RLSCLDGTPPLSWHMRCKIAQGAANGINFLH--ENHHIHRDIKSANILLDEAFTAKISDF 177
Query: 237 GLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDK 296
GLA+A +T + ++++GT Y APE + G +T KSD+YSFGVVLLE+++G AVD+
Sbjct: 178 GLARASEKFAQTVMXSRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITGLPAVDE 236
Query: 297 TKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPR 356
+ Q L+D + +++ + +D K+ + ++A QCL+ + RP
Sbjct: 237 HRE--PQLLLDIKEEIEDEEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKRPD 293
Query: 357 MSEVLAILERLEA 369
+ +V +L+ + A
Sbjct: 294 IKKVQQLLQEMTA 306
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 192 bits (488), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 116/313 (37%), Positives = 187/313 (59%), Gaps = 20/313 (6%)
Query: 64 LSSSNLKAFTFNELKTATRNF--RPDSL----LGEGGFGFVYKGWIDQHSLSPAKPGSGM 117
+S + +F+F ELK T NF RP S+ +GEGGFG VYKG+++ +++ K + +
Sbjct: 7 VSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMV 66
Query: 118 VVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 177
+ ++LK +++ E+ + + H NLV+L+G+ +G++ LVY +MP GSL +
Sbjct: 67 DITTEELK-------QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLD 119
Query: 178 HL-FRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 236
L G PLSW +R K+A GAA G+ FLH E+ I+RD K++NILLD F AK+SDF
Sbjct: 120 RLSCLDGTPPLSWHMRCKIAQGAANGINFLH--ENHHIHRDIKSANILLDEAFTAKISDF 177
Query: 237 GLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDK 296
GLA+A +T + +++GT Y APE + G +T KSD+YSFGVVLLE+++G AVD+
Sbjct: 178 GLARASEKFAQTVMXXRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITGLPAVDE 236
Query: 297 TKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPR 356
+ Q L+D + +++ + +D K+ + ++A QCL+ + RP
Sbjct: 237 HRE--PQLLLDIKEEIEDEEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKRPD 293
Query: 357 MSEVLAILERLEA 369
+ +V +L+ + A
Sbjct: 294 IKKVQQLLQEMTA 306
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 190 bits (482), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 115/313 (36%), Positives = 186/313 (59%), Gaps = 20/313 (6%)
Query: 64 LSSSNLKAFTFNELKTATRNF--RPDSL----LGEGGFGFVYKGWIDQHSLSPAKPGSGM 117
+S + +F+F ELK T NF RP S+ +GEGGFG VYKG+++ +++ K + +
Sbjct: 1 VSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMV 60
Query: 118 VVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 177
+ ++LK +++ E+ + + H NLV+L+G+ +G++ LVY +MP GSL +
Sbjct: 61 DITTEELK-------QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLD 113
Query: 178 HL-FRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 236
L G PLSW +R K+A GAA G+ FLH E+ I+RD K++NILLD F AK+SDF
Sbjct: 114 RLSCLDGTPPLSWHMRCKIAQGAANGINFLH--ENHHIHRDIKSANILLDEAFTAKISDF 171
Query: 237 GLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDK 296
GLA+A + + +++GT Y APE + G +T KSD+YSFGVVLLE+++G AVD+
Sbjct: 172 GLARASEKFAQXVMXXRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITGLPAVDE 230
Query: 297 TKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPR 356
+ Q L+D + +++ + +D K+ + ++A QCL+ + RP
Sbjct: 231 HRE--PQLLLDIKEEIEDEEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKRPD 287
Query: 357 MSEVLAILERLEA 369
+ +V +L+ + A
Sbjct: 288 IKKVQQLLQEMTA 300
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 189 bits (479), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 123/314 (39%), Positives = 174/314 (55%), Gaps = 20/314 (6%)
Query: 59 SEGEILSSSNLKAFT-----FNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKP 113
S + LSSS L F +L+ AT NF L+G G FG VYKG +
Sbjct: 11 SINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRD-------- 62
Query: 114 GSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKG 173
G VA+K+ PE QG +E+ TE+ L HP+LV LIG+C E +L+Y++M G
Sbjct: 63 --GAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENG 120
Query: 174 SLENHLFRRG--PQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNA 231
+L+ HL+ +SW R+++ IGAA+GL +LH +I+RD K+ NILLD F
Sbjct: 121 NLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH--TRAIIHRDVKSINILLDENFVP 178
Query: 232 KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 291
K++DFG++K G D+TH+ V GT GY PEY GRLT KSDVYSFGVVL E+L R
Sbjct: 179 KITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCAR 238
Query: 292 CAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEP 351
A+ ++ +L +WA + +L +I+D L + ++ A++CL
Sbjct: 239 SAIVQSLPREMVNLAEWAVES-HNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSS 297
Query: 352 KLRPRMSEVLAILE 365
+ RP M +VL LE
Sbjct: 298 EDRPSMGDVLWKLE 311
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 186 bits (471), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 122/314 (38%), Positives = 173/314 (55%), Gaps = 20/314 (6%)
Query: 59 SEGEILSSSNLKAFT-----FNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKP 113
S + LSSS L F +L+ AT NF L+G G FG VYKG +
Sbjct: 11 SINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRD-------- 62
Query: 114 GSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKG 173
G VA+K+ PE QG +E+ TE+ L HP+LV LIG+C E +L+Y++M G
Sbjct: 63 --GAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENG 120
Query: 174 SLENHLFRRG--PQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNA 231
+L+ HL+ +SW R+++ IGAA+GL +LH +I+RD K+ NILLD F
Sbjct: 121 NLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH--TRAIIHRDVKSINILLDENFVP 178
Query: 232 KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 291
K++DFG++K G +TH+ V GT GY PEY GRLT KSDVYSFGVVL E+L R
Sbjct: 179 KITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCAR 238
Query: 292 CAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEP 351
A+ ++ +L +WA + +L +I+D L + ++ A++CL
Sbjct: 239 SAIVQSLPREMVNLAEWAVES-HNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSS 297
Query: 352 KLRPRMSEVLAILE 365
+ RP M +VL LE
Sbjct: 298 EDRPSMGDVLWKLE 311
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 179 bits (454), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 113/310 (36%), Positives = 178/310 (57%), Gaps = 20/310 (6%)
Query: 67 SNLKAFTFNELKTATRNF--RPDSL----LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVA 120
+ +F+F ELK T NF RP S+ GEGGFG VYKG+++ +++ K + + +
Sbjct: 1 TRFHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDIT 60
Query: 121 VKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHL- 179
++LK +++ E+ + H NLV+L+G+ +G++ LVY + P GSL + L
Sbjct: 61 TEELK-------QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLS 113
Query: 180 FRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLA 239
G PLSW R K+A GAA G+ FLH E+ I+RD K++NILLD F AK+SDFGLA
Sbjct: 114 CLDGTPPLSWHXRCKIAQGAANGINFLH--ENHHIHRDIKSANILLDEAFTAKISDFGLA 171
Query: 240 KAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKV 299
+A + ++++GT Y APE + G +T KSD+YSFGVVLLE+++G AVD+ +
Sbjct: 172 RASEKFAQXVXXSRIVGTTAYXAPEAL-RGEITPKSDIYSFGVVLLEIITGLPAVDEHRE 230
Query: 300 GIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSE 359
Q L+D + +++ + +D K + ++A QCL+ + RP + +
Sbjct: 231 --PQLLLDIKEEIEDEEKTIEDYIDKKXNDA-DSTSVEAXYSVASQCLHEKKNKRPDIKK 287
Query: 360 VLAILERLEA 369
V +L+ A
Sbjct: 288 VQQLLQEXTA 297
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 148/317 (46%), Gaps = 35/317 (11%)
Query: 57 PKSEGEILSSSNLK---AFTFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKP 113
P S+ +I ++ NL A +++ + +G G FG V++ + H
Sbjct: 9 PMSDYDIPTTENLYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRA--EWH------- 59
Query: 114 GSGMVVAVKKLKPEGFQGHK--EWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMP 171
G VAVK L + F + E+L EV + +L HPN+V +G + N +V E++
Sbjct: 60 --GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLS 117
Query: 172 KGSLENHLFRRGP-QPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 230
+GSL L + G + L R+ +A AKG+ +LH+ +++RD K+ N+L+D ++
Sbjct: 118 RGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYT 177
Query: 231 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
K+ DFGL++ S GT + APE + KSDVYSFGV+L EL
Sbjct: 178 VKVCDFGLSRL--KASXFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWEL--- 232
Query: 291 RCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNE 350
+ + + + V A + + ++ R ++ PQ AA C NE
Sbjct: 233 -ATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLN-------PQVAAIIEG-----CWTNE 279
Query: 351 PKLRPRMSEVLAILERL 367
P RP + ++ +L L
Sbjct: 280 PWKRPSFATIMDLLRPL 296
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 153/318 (48%), Gaps = 37/318 (11%)
Query: 57 PKSEGEILSSSNLK---AFTFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKP 113
P S+ +I ++ NL A +++ + +G G FG V++ + H
Sbjct: 9 PMSDYDIPTTENLYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRA--EWH------- 59
Query: 114 GSGMVVAVKKLKPEGFQGHK--EWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMP 171
G VAVK L + F + E+L EV + +L HPN+V +G + N +V E++
Sbjct: 60 --GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLS 117
Query: 172 KGSLENHLFRRGP-QPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 230
+GSL L + G + L R+ +A AKG+ +LH+ +++R+ K+ N+L+D ++
Sbjct: 118 RGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYT 177
Query: 231 AKLSDFGLAKAGPTGDRTHVSTQ-VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 289
K+ DFGL++ + T +S++ GT + APE + KSDVYSFGV+L EL
Sbjct: 178 VKVCDFGLSRLKAS---TFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWEL-- 232
Query: 290 GRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNN 349
+ + + + V A + + ++ R ++ PQ AA C N
Sbjct: 233 --ATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLN-------PQVAAIIEG-----CWTN 278
Query: 350 EPKLRPRMSEVLAILERL 367
EP RP + ++ +L L
Sbjct: 279 EPWKRPSFATIMDLLRPL 296
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 105/214 (49%), Gaps = 20/214 (9%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
LGEG FG V+ + ++LSP K M+VAVK LK K++ E L L H +
Sbjct: 23 LGEGAFGKVFLA--ECYNLSPTK--DKMLVAVKALKDPTLAARKDFQREAELLTNLQHEH 78
Query: 150 LVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGP--------QP------LSWAVRMKV 195
+VK G C +G+ ++V+E+M G L L GP QP L + + +
Sbjct: 79 IVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHI 138
Query: 196 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVM 255
A A G+ +L A ++RD N L+ A K+ DFG+++ + D V M
Sbjct: 139 ASQIASGMVYL--ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTM 196
Query: 256 GTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 289
+ PE + + TT+SDV+SFGV+L E+ +
Sbjct: 197 LPIRWMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 132/280 (47%), Gaps = 16/280 (5%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPE-GFQGHKEWLTEVNYLGQLHHP 148
LGEG FG V + P G+G +VAVK LK + G Q W E++ L L+H
Sbjct: 22 LGEGHFGKV-----SLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHE 76
Query: 149 NLVKLIGYCLE-GENRL-LVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFL 206
+++K G C + GE L LV E++P GSL ++L R + A + A +G+ +L
Sbjct: 77 HIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS---IGLAQLLLFAQQICEGMAYL 133
Query: 207 HDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTH-VSTQVMGTHGYAAPEY 265
H I+R+ A N+LLD + K+ DFGLAKA P G + V + APE
Sbjct: 134 HS--QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPEC 191
Query: 266 VATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDT 325
+ + SDV+SFGV L ELL+ C ++ L+ A+ ++ R L +++
Sbjct: 192 LKEYKFYYASDVWSFGVTLYELLT-HCDSSQSPPTKFLELIGIAQGQMTVLR-LTELLER 249
Query: 326 KLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILE 365
P K L C E RP ++ IL+
Sbjct: 250 GERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILK 289
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 132/280 (47%), Gaps = 16/280 (5%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPE-GFQGHKEWLTEVNYLGQLHHP 148
LGEG FG V + P G+G +VAVK LK + G Q W E++ L L+H
Sbjct: 22 LGEGHFGKV-----SLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHE 76
Query: 149 NLVKLIGYCLE-GENRL-LVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFL 206
+++K G C + GE L LV E++P GSL ++L R + A + A +G+ +L
Sbjct: 77 HIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS---IGLAQLLLFAQQICEGMAYL 133
Query: 207 HDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTH-VSTQVMGTHGYAAPEY 265
H I+R+ A N+LLD + K+ DFGLAKA P G + V + APE
Sbjct: 134 H--AQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPEC 191
Query: 266 VATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDT 325
+ + SDV+SFGV L ELL+ C ++ L+ A+ ++ R L +++
Sbjct: 192 LKEYKFYYASDVWSFGVTLYELLT-HCDSSQSPPTKFLELIGIAQGQMTVLR-LTELLER 249
Query: 326 KLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILE 365
P K L C E RP ++ IL+
Sbjct: 250 GERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILK 289
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 108/216 (50%), Gaps = 13/216 (6%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLT-EVNYLGQLHHP 148
LGEG FG V D P +G VAVK LKPE H L E+ L L+H
Sbjct: 29 LGEGHFGKVELCRYD-----PEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHE 83
Query: 149 NLVKLIGYCLE--GENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFL 206
N+VK G C E G L+ EF+P GSL+ +L + ++ ++K A+ KG+ +L
Sbjct: 84 NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL-PKNKNKINLKQQLKYAVQICKGMDYL 142
Query: 207 HDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG-DRTHVSTQVMGTHGYAAPEY 265
Q ++RD A N+L+++E K+ DFGL KA T + V + APE
Sbjct: 143 --GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPEC 200
Query: 266 VATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGI 301
+ + SDV+SFGV L ELL+ C D + + +
Sbjct: 201 LMQSKFYIASDVWSFGVTLHELLT-YCDSDSSPMAL 235
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 108/216 (50%), Gaps = 13/216 (6%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLT-EVNYLGQLHHP 148
LGEG FG V D P +G VAVK LKPE H L E+ L L+H
Sbjct: 17 LGEGHFGKVELCRYD-----PEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHE 71
Query: 149 NLVKLIGYCLE--GENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFL 206
N+VK G C E G L+ EF+P GSL+ +L + ++ ++K A+ KG+ +L
Sbjct: 72 NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL-PKNKNKINLKQQLKYAVQICKGMDYL 130
Query: 207 HDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG-DRTHVSTQVMGTHGYAAPEY 265
Q ++RD A N+L+++E K+ DFGL KA T + V + APE
Sbjct: 131 --GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPEC 188
Query: 266 VATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGI 301
+ + SDV+SFGV L ELL+ C D + + +
Sbjct: 189 LMQSKFYIASDVWSFGVTLHELLT-YCDSDSSPMAL 223
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 137/293 (46%), Gaps = 47/293 (16%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-------KPEGFQGHKEWLTEVNYL 142
+G+GGFG V+KG + K S VVA+K L + E + +E+ EV +
Sbjct: 27 IGKGGFGLVHKGRL-------VKDKS--VVAIKSLILGDSEGETEMIEKFQEFQREVFIM 77
Query: 143 GQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKG 202
L+HPN+VKL Y L +V EF+P G L + L + P+ W+V++++ + A G
Sbjct: 78 SNLNHPNIVKL--YGLMHNPPRMVMEFVPCGDLYHRLLDKA-HPIKWSVKLRLMLDIALG 134
Query: 203 LTFLHDAESQVIYRDFKASNILL-----DAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 257
+ ++ + +++RD ++ NI L +A AK++DFGL++ H + ++G
Sbjct: 135 IEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQS-----VHSVSGLLGN 189
Query: 258 HGYAAPEYVATGR--LTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSD 315
+ APE + T K+D YSF ++L +L+G D+ G
Sbjct: 190 FQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYG--------------- 234
Query: 316 KRKLFRIM-DTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 367
K K ++ + L P+ + C + +PK RP S ++ L L
Sbjct: 235 KIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 131/280 (46%), Gaps = 16/280 (5%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKE-WLTEVNYLGQLHHP 148
LGEG FG V + P G+G +VAVK LK + H+ W E++ L L+H
Sbjct: 39 LGEGHFGKV-----SLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHE 93
Query: 149 NLVKLIGYCLE-GENRL-LVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFL 206
+++K G C + G L LV E++P GSL ++L R + A + A +G+ +L
Sbjct: 94 HIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHS---IGLAQLLLFAQQICEGMAYL 150
Query: 207 HDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTH-VSTQVMGTHGYAAPEY 265
H I+RD A N+LLD + K+ DFGLAKA P G + V + APE
Sbjct: 151 H--AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPEC 208
Query: 266 VATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDT 325
+ + SDV+SFGV L ELL+ C ++ L+ A+ ++ R L +++
Sbjct: 209 LKEYKFYYASDVWSFGVTLYELLT-HCDSSQSPPTKFLELIGIAQGQMTVLR-LTELLER 266
Query: 326 KLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILE 365
P K L C E RP ++ IL+
Sbjct: 267 GERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILK 306
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 101/213 (47%), Gaps = 19/213 (8%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
LGEG FG V+ + H+L P + M+VAVK LK +++ E L L H +
Sbjct: 26 LGEGAFGKVFLA--ECHNLLPEQ--DKMLVAVKALKEASESARQDFQREAELLTMLQHQH 81
Query: 150 LVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQ-------------PLSWAVRMKVA 196
+V+ G C EG L+V+E+M G L L GP PL + VA
Sbjct: 82 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 141
Query: 197 IGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMG 256
A G+ +L A ++RD N L+ K+ DFG+++ + D V + M
Sbjct: 142 SQVAAGMVYL--AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 199
Query: 257 THGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 289
+ PE + + TT+SDV+SFGVVL E+ +
Sbjct: 200 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 232
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 101/213 (47%), Gaps = 19/213 (8%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
LGEG FG V+ + H+L P + M+VAVK LK +++ E L L H +
Sbjct: 20 LGEGAFGKVFLA--ECHNLLPEQ--DKMLVAVKALKEASESARQDFQREAELLTMLQHQH 75
Query: 150 LVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQ-------------PLSWAVRMKVA 196
+V+ G C EG L+V+E+M G L L GP PL + VA
Sbjct: 76 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 135
Query: 197 IGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMG 256
A G+ +L A ++RD N L+ K+ DFG+++ + D V + M
Sbjct: 136 SQVAAGMVYL--AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 193
Query: 257 THGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 289
+ PE + + TT+SDV+SFGVVL E+ +
Sbjct: 194 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 226
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 130/292 (44%), Gaps = 39/292 (13%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
LGEG FG V+ + ++L P + ++VAVK LK K++ E L L H +
Sbjct: 21 LGEGAFGKVFLA--ECYNLCPEQ--DKILVAVKTLKDASDNARKDFHREAELLTNLQHEH 76
Query: 150 LVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQP-----------LSWAVRMKVAIG 198
+VK G C+EG+ ++V+E+M G L L GP L+ + + +A
Sbjct: 77 IVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQ 136
Query: 199 AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH 258
A G+ +L A ++RD N L+ K+ DFG+++ + D V M
Sbjct: 137 IAAGMVYL--ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPI 194
Query: 259 GYAAPEYVATGRLTTKSDVYSFGVVLLELLS-GRCAVDKTKVGIEQSLVDWAKPY--LSD 315
+ PE + + TT+SDV+S GVVL E+ + G+ +P+ LS+
Sbjct: 195 RWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGK------------------QPWYQLSN 236
Query: 316 KRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 367
+ I ++ Q P+ L L C EP +R + + +L+ L
Sbjct: 237 NEVIECITQGRV-LQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNL 287
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 101/213 (47%), Gaps = 19/213 (8%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
LGEG FG V+ + H+L P + M+VAVK LK +++ E L L H +
Sbjct: 49 LGEGAFGKVFLA--ECHNLLPEQ--DKMLVAVKALKEASESARQDFQREAELLTMLQHQH 104
Query: 150 LVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQ-------------PLSWAVRMKVA 196
+V+ G C EG L+V+E+M G L L GP PL + VA
Sbjct: 105 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 164
Query: 197 IGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMG 256
A G+ +L A ++RD N L+ K+ DFG+++ + D V + M
Sbjct: 165 SQVAAGMVYL--AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 222
Query: 257 THGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 289
+ PE + + TT+SDV+SFGVVL E+ +
Sbjct: 223 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 255
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 136/293 (46%), Gaps = 47/293 (16%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-------KPEGFQGHKEWLTEVNYL 142
+G+GGFG V+KG + K S VVA+K L + E + +E+ EV +
Sbjct: 27 IGKGGFGLVHKGRL-------VKDKS--VVAIKSLILGDSEGETEMIEKFQEFQREVFIM 77
Query: 143 GQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKG 202
L+HPN+VKL Y L +V EF+P G L + L + P+ W+V++++ + A G
Sbjct: 78 SNLNHPNIVKL--YGLMHNPPRMVMEFVPCGDLYHRLLDKA-HPIKWSVKLRLMLDIALG 134
Query: 203 LTFLHDAESQVIYRDFKASNILL-----DAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 257
+ ++ + +++RD ++ NI L +A AK++DFG ++ H + ++G
Sbjct: 135 IEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQS-----VHSVSGLLGN 189
Query: 258 HGYAAPEYVATGR--LTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSD 315
+ APE + T K+D YSF ++L +L+G D+ G
Sbjct: 190 FQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYG--------------- 234
Query: 316 KRKLFRIM-DTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 367
K K ++ + L P+ + C + +PK RP S ++ L L
Sbjct: 235 KIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 136/293 (46%), Gaps = 47/293 (16%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-------KPEGFQGHKEWLTEVNYL 142
+G+GGFG V+KG + K S VVA+K L + E + +E+ EV +
Sbjct: 27 IGKGGFGLVHKGRL-------VKDKS--VVAIKSLILGDSEGETEMIEKFQEFQREVFIM 77
Query: 143 GQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKG 202
L+HPN+VKL Y L +V EF+P G L + L + P+ W+V++++ + A G
Sbjct: 78 SNLNHPNIVKL--YGLMHNPPRMVMEFVPCGDLYHRLLDKA-HPIKWSVKLRLMLDIALG 134
Query: 203 LTFLHDAESQVIYRDFKASNILL-----DAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 257
+ ++ + +++RD ++ NI L +A AK++DF L++ H + ++G
Sbjct: 135 IEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQS-----VHSVSGLLGN 189
Query: 258 HGYAAPEYVATGR--LTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSD 315
+ APE + T K+D YSF ++L +L+G D+ G
Sbjct: 190 FQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYG--------------- 234
Query: 316 KRKLFRIM-DTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 367
K K ++ + L P+ + C + +PK RP S ++ L L
Sbjct: 235 KIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 141/297 (47%), Gaps = 29/297 (9%)
Query: 89 LLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHK-EWLTEVNYLGQLHH 147
++G G FG VYKG + S P VA+K LK + + ++L E +GQ H
Sbjct: 51 VIGAGEFGEVYKGMLKTSSGKKEVP-----VAIKTLKAGYTEKQRVDFLGEAGIMGQFSH 105
Query: 148 PNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLH 207
N+++L G + + +++ E+M G+L+ L R S + + G A G+ +L
Sbjct: 106 HNIIRLEGVISKYKPMMIITEYMENGALDKFL-REKDGEFSVLQLVGMLRGIAAGMKYL- 163
Query: 208 DAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG-DRTHVSTQVMGTHGYAAPEYV 266
A ++RD A NIL+++ K+SDFGL++ + T+ ++ + APE +
Sbjct: 164 -ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAI 222
Query: 267 ATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDT 325
+ + T+ SDV+SFG+V+ E+++ +PY ++ + ++
Sbjct: 223 SYRKFTSASDVWSFGIVMWEVMTYG-----------------ERPYWELSNHEVMKAIND 265
Query: 326 KLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL-EAPKNSAKLSQSEP 381
P L +QC E RP+ +++++IL++L AP + L+ +P
Sbjct: 266 GFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPDSLKTLADFDP 322
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 131/282 (46%), Gaps = 33/282 (11%)
Query: 87 DSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH-KEWLTEVNYLGQL 145
+ ++G G FG VY G + + G + AVK L G ++LTE +
Sbjct: 94 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 147
Query: 146 HHPNLVKLIGYCLEGENR-LLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIG--AAKG 202
HPN++ L+G CL E L+V +M G L N + P V+ + G AKG
Sbjct: 148 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKG 204
Query: 203 LTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAK--AGPTGDRTHVSTQVMGTHGY 260
+ FL A + ++RD A N +LD +F K++DFGLA+ D H T +
Sbjct: 205 MKFL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 262
Query: 261 AAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLF 320
A E + T + TTKSDV+SFGV+L EL++ R A V V YL R+L
Sbjct: 263 MALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITV-----YLLQGRRLL 316
Query: 321 RIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLA 362
+ P+ + L+C + + ++RP SE+++
Sbjct: 317 Q----------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 348
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 148/324 (45%), Gaps = 46/324 (14%)
Query: 69 LKAFTFNELKTATRNF---------RPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVV 119
+ FTF + A R F + + ++G G FG V G H P K + V
Sbjct: 11 IDPFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSG----HLKLPGK--REIFV 64
Query: 120 AVKKLKPEGF--QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 177
A+K LK G+ + +++L+E + +GQ HPN++ L G + +++ EFM GSL++
Sbjct: 65 AIKTLK-SGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDS 123
Query: 178 HLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFG 237
L R+ + + + G A G+ +L A+ ++RD A NIL+++ K+SDFG
Sbjct: 124 FL-RQNDGQFTVIQLVGMLRGIAAGMKYL--ADMNYVHRDLAARNILVNSNLVCKVSDFG 180
Query: 238 LAK--AGPTGDRTHVSTQVMGTH---GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRC 292
L++ T D T+ T +G + APE + + T+ SDV+S+G+V+ E++S
Sbjct: 181 LSRFLEDDTSDPTY--TSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYG- 237
Query: 293 AVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEP 351
+PY + + ++ P L L C +
Sbjct: 238 ----------------ERPYWDMTNQDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDR 281
Query: 352 KLRPRMSEVLAILERLEAPKNSAK 375
RP+ +++ L+++ NS K
Sbjct: 282 NHRPKFGQIVNTLDKMIRNPNSLK 305
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 132/296 (44%), Gaps = 63/296 (21%)
Query: 87 DSLLGEGGFGFVYKG-WI-DQHSLSPAK--PGSGMVVAVKKLKPEGFQGHKEWLTEVNYL 142
+ ++G GGFG VY+ WI D+ ++ A+ P + ++ ++ E
Sbjct: 12 EEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEA-----------KLF 60
Query: 143 GQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQP---LSWAVRMKVAIGA 199
L HPN++ L G CL+ N LV EF G L L + P ++WAV++
Sbjct: 61 AMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQI------ 114
Query: 200 AKGLTFLHD-AESQVIYRDFKASNILLDAEFN--------AKLSDFGLAKAGPTGDRTHV 250
A+G+ +LHD A +I+RD K+SNIL+ + K++DFGLA+ H
Sbjct: 115 ARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR------EWHR 168
Query: 251 STQV--MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRC---AVDKTKVGIEQSL 305
+T++ G + + APE + + SDV+S+GV+L ELL+G +D V
Sbjct: 169 TTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVA----- 223
Query: 306 VDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 361
+ + KL P A L C N +P RP + +L
Sbjct: 224 --------------YGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNIL 265
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 144/309 (46%), Gaps = 39/309 (12%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGF--QGHKEWLTEVN 140
N D ++G G FG V G + P+K + VA+K LK G+ + +++L E +
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKL----PSK--KEISVAIKTLKV-GYTEKQRRDFLGEAS 98
Query: 141 YLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI--G 198
+GQ HPN+++L G + + ++V E+M GSL++ L + Q + V V + G
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ---FTVIQLVGMLRG 155
Query: 199 AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH 258
A G+ +L D ++RD A NIL+++ K+SDFGLA+ D + G
Sbjct: 156 IASGMKYLSDM--GYVHRDLAARNILINSNLVCKVSDFGLARV--LEDDPEAAYTTRGGK 211
Query: 259 ---GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS- 314
+ +PE +A + T+ SDV+S+G+VL E++S +PY
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG-----------------ERPYWEM 254
Query: 315 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEAPKNSA 374
+ + + +D P L L C + RP+ ++++IL++L S
Sbjct: 255 SNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSL 314
Query: 375 KLSQSEPHR 383
K+ S R
Sbjct: 315 KIITSAAAR 323
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 131/282 (46%), Gaps = 33/282 (11%)
Query: 87 DSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH-KEWLTEVNYLGQL 145
+ ++G G FG VY G + + G + AVK L G ++LTE +
Sbjct: 40 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 93
Query: 146 HHPNLVKLIGYCLEGENR-LLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIG--AAKG 202
HPN++ L+G CL E L+V +M G L N + P V+ + G AKG
Sbjct: 94 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKG 150
Query: 203 LTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAK--AGPTGDRTHVSTQVMGTHGY 260
+ FL A + ++RD A N +LD +F K++DFGLA+ D H T +
Sbjct: 151 MKFL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 208
Query: 261 AAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLF 320
A E + T + TTKSDV+SFGV+L EL++ R A V V YL R+L
Sbjct: 209 MALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITV-----YLLQGRRLL 262
Query: 321 RIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLA 362
+ P+ + L+C + + ++RP SE+++
Sbjct: 263 Q----------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 294
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 131/282 (46%), Gaps = 33/282 (11%)
Query: 87 DSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH-KEWLTEVNYLGQL 145
+ ++G G FG VY G + + G + AVK L G ++LTE +
Sbjct: 33 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 86
Query: 146 HHPNLVKLIGYCLEGENR-LLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIG--AAKG 202
HPN++ L+G CL E L+V +M G L N + P V+ + G AKG
Sbjct: 87 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKG 143
Query: 203 LTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAK--AGPTGDRTHVSTQVMGTHGY 260
+ FL A + ++RD A N +LD +F K++DFGLA+ D H T +
Sbjct: 144 MKFL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 201
Query: 261 AAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLF 320
A E + T + TTKSDV+SFGV+L EL++ R A V V YL R+L
Sbjct: 202 MALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITV-----YLLQGRRLL 255
Query: 321 RIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLA 362
+ P+ + L+C + + ++RP SE+++
Sbjct: 256 Q----------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 287
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 131/282 (46%), Gaps = 33/282 (11%)
Query: 87 DSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH-KEWLTEVNYLGQL 145
+ ++G G FG VY G + + G + AVK L G ++LTE +
Sbjct: 35 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 88
Query: 146 HHPNLVKLIGYCLEGENR-LLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIG--AAKG 202
HPN++ L+G CL E L+V +M G L N + P V+ + G AKG
Sbjct: 89 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKG 145
Query: 203 LTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAK--AGPTGDRTHVSTQVMGTHGY 260
+ FL A + ++RD A N +LD +F K++DFGLA+ D H T +
Sbjct: 146 MKFL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 203
Query: 261 AAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLF 320
A E + T + TTKSDV+SFGV+L EL++ R A V V YL R+L
Sbjct: 204 MALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITV-----YLLQGRRLL 257
Query: 321 RIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLA 362
+ P+ + L+C + + ++RP SE+++
Sbjct: 258 Q----------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 289
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 131/282 (46%), Gaps = 33/282 (11%)
Query: 87 DSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH-KEWLTEVNYLGQL 145
+ ++G G FG VY G + + G + AVK L G ++LTE +
Sbjct: 36 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 89
Query: 146 HHPNLVKLIGYCLEGENR-LLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIG--AAKG 202
HPN++ L+G CL E L+V +M G L N + P V+ + G AKG
Sbjct: 90 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKG 146
Query: 203 LTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAK--AGPTGDRTHVSTQVMGTHGY 260
+ FL A + ++RD A N +LD +F K++DFGLA+ D H T +
Sbjct: 147 MKFL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKW 204
Query: 261 AAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLF 320
A E + T + TTKSDV+SFGV+L EL++ R A V V YL R+L
Sbjct: 205 MALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITV-----YLLQGRRLL 258
Query: 321 RIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLA 362
+ P+ + L+C + + ++RP SE+++
Sbjct: 259 Q----------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 290
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 131/282 (46%), Gaps = 33/282 (11%)
Query: 87 DSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH-KEWLTEVNYLGQL 145
+ ++G G FG VY G + + G + AVK L G ++LTE +
Sbjct: 35 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 88
Query: 146 HHPNLVKLIGYCLEGENR-LLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIG--AAKG 202
HPN++ L+G CL E L+V +M G L N + P V+ + G AKG
Sbjct: 89 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKG 145
Query: 203 LTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAK--AGPTGDRTHVSTQVMGTHGY 260
+ FL A + ++RD A N +LD +F K++DFGLA+ D H T +
Sbjct: 146 MKFL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 203
Query: 261 AAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLF 320
A E + T + TTKSDV+SFGV+L EL++ R A V V YL R+L
Sbjct: 204 MALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITV-----YLLQGRRLL 257
Query: 321 RIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLA 362
+ P+ + L+C + + ++RP SE+++
Sbjct: 258 Q----------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 289
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 131/282 (46%), Gaps = 33/282 (11%)
Query: 87 DSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH-KEWLTEVNYLGQL 145
+ ++G G FG VY G + + G + AVK L G ++LTE +
Sbjct: 36 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 89
Query: 146 HHPNLVKLIGYCLEGENR-LLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIG--AAKG 202
HPN++ L+G CL E L+V +M G L N + P V+ + G AKG
Sbjct: 90 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKG 146
Query: 203 LTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAK--AGPTGDRTHVSTQVMGTHGY 260
+ FL A + ++RD A N +LD +F K++DFGLA+ D H T +
Sbjct: 147 MKFL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 204
Query: 261 AAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLF 320
A E + T + TTKSDV+SFGV+L EL++ R A V V YL R+L
Sbjct: 205 MALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITV-----YLLQGRRLL 258
Query: 321 RIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLA 362
+ P+ + L+C + + ++RP SE+++
Sbjct: 259 Q----------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 290
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 124/254 (48%), Gaps = 27/254 (10%)
Query: 119 VAVKKLKPEGF--QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 176
VA+K LK G+ + +++L+E + +GQ HPN+++L G G ++V E+M GSL+
Sbjct: 80 VAIKALKA-GYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLD 138
Query: 177 NHL-FRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSD 235
L G + V M +GA G+ +L D ++RD A N+L+D+ K+SD
Sbjct: 139 TFLRTHDGQFTIMQLVGMLRGVGA--GMRYLSDL--GYVHRDLAARNVLVDSNLVCKVSD 194
Query: 236 FGLAKAGPTG-DRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAV 294
FGL++ D + +T + APE +A ++ SDV+SFGVV+ E+L+
Sbjct: 195 FGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYG--- 251
Query: 295 DKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 353
+PY + R + ++ P H L L C + +
Sbjct: 252 --------------ERPYWNMTNRDVISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQ 297
Query: 354 RPRMSEVLAILERL 367
RPR S+++++L+ L
Sbjct: 298 RPRFSQIVSVLDAL 311
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 130/282 (46%), Gaps = 37/282 (13%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
LG G FG V+ ++H+ VAVK +KP G + +L E N + L H
Sbjct: 23 LGAGQFGEVWMATYNKHT----------KVAVKTMKP-GSMSVEAFLAEANVMKTLQHDK 71
Query: 150 LVKLIGYCLEGENRLLVYEFMPKGSLENHLFRR--GPQPLSWAVRMKVAIGAAKGLTFLH 207
LVKL + E ++ EFM KGSL + L QPL + I A+G+ F+
Sbjct: 72 LVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQI--AEGMAFIE 128
Query: 208 DAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVA 267
+ I+RD +A+NIL+ A K++DFGLA+ + T + APE +
Sbjct: 129 --QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIK-WTAPEAIN 185
Query: 268 TGRLTTKSDVYSFGVVLLELLS-GRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTK 326
G T KSDV+SFG++L+E+++ GR P +S+ ++ R ++
Sbjct: 186 FGSFTIKSDVWSFGILLMEIVTYGRIPY----------------PGMSNP-EVIRALERG 228
Query: 327 LGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLE 368
P+ + ++C N P+ RP + ++L+ E
Sbjct: 229 YRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFE 270
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 144/309 (46%), Gaps = 39/309 (12%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGF--QGHKEWLTEVN 140
N D ++G G FG V G + P+K + VA+K LK G+ + +++L E +
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKL----PSK--KEISVAIKTLKV-GYTEKQRRDFLGEAS 98
Query: 141 YLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI--G 198
+GQ HPN+++L G + + ++V E+M GSL++ L + Q + V V + G
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ---FTVIQLVGMLRG 155
Query: 199 AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH 258
A G+ +L D ++RD A NIL+++ K+SDFGL++ D + G
Sbjct: 156 IASGMKYLSDM--GFVHRDLAARNILINSNLVCKVSDFGLSRV--LEDDPEAAYTTRGGK 211
Query: 259 ---GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS- 314
+ +PE +A + T+ SDV+S+G+VL E++S +PY
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG-----------------ERPYWEM 254
Query: 315 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEAPKNSA 374
+ + + +D P L L C + RP+ ++++IL++L S
Sbjct: 255 SNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSL 314
Query: 375 KLSQSEPHR 383
K+ S R
Sbjct: 315 KIITSAAAR 323
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 144/309 (46%), Gaps = 39/309 (12%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGF--QGHKEWLTEVN 140
N D ++G G FG V G + P+K + VA+K LK G+ + +++L E +
Sbjct: 34 NISIDKVVGAGEFGEVCSGRLKL----PSK--KEISVAIKTLKV-GYTEKQRRDFLGEAS 86
Query: 141 YLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI--G 198
+GQ HPN+++L G + + ++V E+M GSL++ L + Q + V V + G
Sbjct: 87 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ---FTVIQLVGMLRG 143
Query: 199 AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH 258
A G+ +L D ++RD A NIL+++ K+SDFGL++ D + G
Sbjct: 144 IASGMKYLSDM--GYVHRDLAARNILINSNLVCKVSDFGLSRV--LEDDPEAAYTTRGGK 199
Query: 259 ---GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS- 314
+ +PE +A + T+ SDV+S+G+VL E++S +PY
Sbjct: 200 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG-----------------ERPYWEM 242
Query: 315 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEAPKNSA 374
+ + + +D P L L C + RP+ ++++IL++L S
Sbjct: 243 SNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSL 302
Query: 375 KLSQSEPHR 383
K+ S R
Sbjct: 303 KIITSAAAR 311
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 144/309 (46%), Gaps = 39/309 (12%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGF--QGHKEWLTEVN 140
N D ++G G FG V G + P+K + VA+K LK G+ + +++L E +
Sbjct: 17 NISIDKVVGAGEFGEVCSGRLKL----PSK--KEISVAIKTLKV-GYTEKQRRDFLGEAS 69
Query: 141 YLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI--G 198
+GQ HPN+++L G + + ++V E+M GSL++ L + Q + V V + G
Sbjct: 70 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ---FTVIQLVGMLRG 126
Query: 199 AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH 258
A G+ +L D ++RD A NIL+++ K+SDFGL++ D + G
Sbjct: 127 IASGMKYLSDM--GYVHRDLAARNILINSNLVCKVSDFGLSRV--LEDDPEAAYTTRGGK 182
Query: 259 ---GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS- 314
+ +PE +A + T+ SDV+S+G+VL E++S +PY
Sbjct: 183 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG-----------------ERPYWEM 225
Query: 315 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEAPKNSA 374
+ + + +D P L L C + RP+ ++++IL++L S
Sbjct: 226 SNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSL 285
Query: 375 KLSQSEPHR 383
K+ S R
Sbjct: 286 KIITSAAAR 294
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 144/309 (46%), Gaps = 39/309 (12%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGF--QGHKEWLTEVN 140
N D ++G G FG V G + P+K + VA+K LK G+ + +++L E +
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKL----PSK--KEISVAIKTLKV-GYTEKQRRDFLGEAS 98
Query: 141 YLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI--G 198
+GQ HPN+++L G + + ++V E+M GSL++ L + Q + V V + G
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ---FTVIQLVGMLRG 155
Query: 199 AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH 258
A G+ +L D ++RD A NIL+++ K+SDFGL++ D + G
Sbjct: 156 IASGMKYLSDM--GYVHRDLAARNILINSNLVCKVSDFGLSRV--LEDDPEAAYTTRGGK 211
Query: 259 ---GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS- 314
+ +PE +A + T+ SDV+S+G+VL E++S +PY
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG-----------------ERPYWEM 254
Query: 315 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEAPKNSA 374
+ + + +D P L L C + RP+ ++++IL++L S
Sbjct: 255 SNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSL 314
Query: 375 KLSQSEPHR 383
K+ S R
Sbjct: 315 KIITSAAAR 323
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 144/309 (46%), Gaps = 39/309 (12%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGF--QGHKEWLTEVN 140
N D ++G G FG V G + P+K + VA+K LK G+ + +++L E +
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKL----PSK--KEISVAIKTLKV-GYTEKQRRDFLGEAS 98
Query: 141 YLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI--G 198
+GQ HPN+++L G + + ++V E+M GSL++ L + Q + V V + G
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ---FTVIQLVGMLRG 155
Query: 199 AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH 258
A G+ +L D ++RD A NIL+++ K+SDFGL++ D + G
Sbjct: 156 IASGMKYLSDM--GYVHRDLAARNILINSNLVCKVSDFGLSRV--LEDDPEAAYTTRGGK 211
Query: 259 ---GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS- 314
+ +PE +A + T+ SDV+S+G+VL E++S +PY
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG-----------------ERPYWEM 254
Query: 315 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEAPKNSA 374
+ + + +D P L L C + RP+ ++++IL++L S
Sbjct: 255 SNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSL 314
Query: 375 KLSQSEPHR 383
K+ S R
Sbjct: 315 KIITSAAAR 323
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 144/309 (46%), Gaps = 39/309 (12%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGF--QGHKEWLTEVN 140
N D ++G G FG V G + P+K + VA+K LK G+ + +++L E +
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKL----PSK--KEISVAIKTLKV-GYTEKQRRDFLGEAS 98
Query: 141 YLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI--G 198
+GQ HPN+++L G + + ++V E+M GSL++ L + Q + V V + G
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ---FTVIQLVGMLRG 155
Query: 199 AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH 258
A G+ +L D ++RD A NIL+++ K+SDFGL++ D + G
Sbjct: 156 IASGMKYLSDM--GYVHRDLAARNILINSNLVCKVSDFGLSRV--LEDDPEAAYTTRGGK 211
Query: 259 ---GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS- 314
+ +PE +A + T+ SDV+S+G+VL E++S +PY
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG-----------------ERPYWEM 254
Query: 315 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEAPKNSA 374
+ + + +D P L L C + RP+ ++++IL++L S
Sbjct: 255 SNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSL 314
Query: 375 KLSQSEPHR 383
K+ S R
Sbjct: 315 KIITSAAAR 323
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 144/309 (46%), Gaps = 39/309 (12%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGF--QGHKEWLTEVN 140
N D ++G G FG V G + P+K + VA+K LK G+ + +++L E +
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKL----PSK--KEISVAIKTLKV-GYTEKQRRDFLGEAS 98
Query: 141 YLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI--G 198
+GQ HPN+++L G + + ++V E+M GSL++ L + Q + V V + G
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ---FTVIQLVGMLRG 155
Query: 199 AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH 258
A G+ +L D ++RD A NIL+++ K+SDFGL++ D + G
Sbjct: 156 IASGMKYLSDM--GYVHRDLAARNILINSNLVCKVSDFGLSRV--LEDDPEAAYTTRGGK 211
Query: 259 ---GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS- 314
+ +PE +A + T+ SDV+S+G+VL E++S +PY
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG-----------------ERPYWEM 254
Query: 315 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEAPKNSA 374
+ + + +D P L L C + RP+ ++++IL++L S
Sbjct: 255 SNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSL 314
Query: 375 KLSQSEPHR 383
K+ S R
Sbjct: 315 KIITSAAAR 323
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 144/309 (46%), Gaps = 39/309 (12%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGF--QGHKEWLTEVN 140
N D ++G G FG V G + P+K + VA+K LK G+ + +++L E +
Sbjct: 44 NISIDKVVGAGEFGEVCSGRLKL----PSK--KEISVAIKTLKV-GYTEKQRRDFLGEAS 96
Query: 141 YLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI--G 198
+GQ HPN+++L G + + ++V E+M GSL++ L + Q + V V + G
Sbjct: 97 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ---FTVIQLVGMLRG 153
Query: 199 AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH 258
A G+ +L D ++RD A NIL+++ K+SDFGL++ D + G
Sbjct: 154 IASGMKYLSDM--GYVHRDLAARNILINSNLVCKVSDFGLSRV--LEDDPEAAYTTRGGK 209
Query: 259 ---GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS- 314
+ +PE +A + T+ SDV+S+G+VL E++S +PY
Sbjct: 210 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG-----------------ERPYWEM 252
Query: 315 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEAPKNSA 374
+ + + +D P L L C + RP+ ++++IL++L S
Sbjct: 253 SNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSL 312
Query: 375 KLSQSEPHR 383
K+ S R
Sbjct: 313 KIITSAAAR 321
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 129/279 (46%), Gaps = 31/279 (11%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
LG G FG VY+G ++SL+ VAVK LK + + +E+L E + ++ HPN
Sbjct: 19 LGGGQFGEVYEGVWKKYSLT---------VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 68
Query: 150 LVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDA 209
LV+L+G C ++ EFM G+L ++L Q +S V + +A + + +L
Sbjct: 69 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE-- 126
Query: 210 ESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATG 269
+ I+RD A N L+ K++DFGL++ TGD + APE +A
Sbjct: 127 KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTXTAHAGAKFPIKWTAPESLAYN 185
Query: 270 RLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLG 328
+ + KSDV++FGV+L E+ + G+ PY D +++ +++
Sbjct: 186 KFSIKSDVWAFGVLLWEIAT---------YGM--------SPYPGIDPSQVYELLEKDYR 228
Query: 329 GQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 367
+ P+ L C P RP +E+ E +
Sbjct: 229 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 267
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 132/288 (45%), Gaps = 46/288 (15%)
Query: 87 DSLLGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQL 145
+ ++G G FG V K W + VA+K+++ E + K ++ E+ L ++
Sbjct: 14 EEVVGRGAFGVVCKAKWRAKD------------VAIKQIESESER--KAFIVELRQLSRV 59
Query: 146 HHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVR-MKVAIGAAKGLT 204
+HPN+VKL G CL LV E+ GSL N L P P A M + ++G+
Sbjct: 60 NHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVA 117
Query: 205 FLHDAESQ-VIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAA 262
+LH + + +I+RD K N+LL A K+ DFG A +TH+ T G+ + A
Sbjct: 118 YLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA----CDIQTHM-TNNKGSAAWMA 172
Query: 263 PEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRI 322
PE + K DV+S+G++L E+++ R KP+ FRI
Sbjct: 173 PEVFEGSNYSEKCDVFSWGIILWEVITRR------------------KPFDEIGGPAFRI 214
Query: 323 MDTKLGGQYP---QKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 367
M G P + +L +C + +P RP M E++ I+ L
Sbjct: 215 MWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHL 262
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 143/309 (46%), Gaps = 39/309 (12%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGF--QGHKEWLTEVN 140
N D ++G G FG V G + P+K + VA+K LK G+ + +++L E +
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKL----PSK--KEISVAIKTLKV-GYTEKQRRDFLGEAS 98
Query: 141 YLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI--G 198
+GQ HPN+++L G + + ++V E+M GSL++ L + Q + V V + G
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ---FTVIQLVGMLRG 155
Query: 199 AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH 258
A G+ +L D ++RD A NIL+++ K+SDFGL + D + G
Sbjct: 156 IASGMKYLSDM--GYVHRDLAARNILINSNLVCKVSDFGLGRV--LEDDPEAAYTTRGGK 211
Query: 259 ---GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS- 314
+ +PE +A + T+ SDV+S+G+VL E++S +PY
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG-----------------ERPYWEM 254
Query: 315 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEAPKNSA 374
+ + + +D P L L C + RP+ ++++IL++L S
Sbjct: 255 SNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSL 314
Query: 375 KLSQSEPHR 383
K+ S R
Sbjct: 315 KIITSAAAR 323
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 124/256 (48%), Gaps = 31/256 (12%)
Query: 119 VAVKKLKPEGF--QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 176
VA+K LK G+ + +++L+E + +GQ HPN+++L G G ++V E+M GSL+
Sbjct: 80 VAIKALKA-GYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLD 138
Query: 177 NHL-FRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSD 235
L G + V M +GA G+ +L D ++RD A N+L+D+ K+SD
Sbjct: 139 TFLRTHDGQFTIMQLVGMLRGVGA--GMRYLSDL--GYVHRDLAARNVLVDSNLVCKVSD 194
Query: 236 FGLAKA---GPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRC 292
FGL++ P T ++ + APE +A ++ SDV+SFGVV+ E+L+
Sbjct: 195 FGLSRVLEDDPDAAXTTTGGKI--PIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYG- 251
Query: 293 AVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEP 351
+PY + R + ++ P H L L C + +
Sbjct: 252 ----------------ERPYWNMTNRDVISSVEEGYRLPAPMGCPHALHQLMLDCWHKDR 295
Query: 352 KLRPRMSEVLAILERL 367
RPR S+++++L+ L
Sbjct: 296 AQRPRFSQIVSVLDAL 311
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 148/324 (45%), Gaps = 44/324 (13%)
Query: 72 FTFNELKTATRNF---------RPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVK 122
FTF + A R F + + ++G G FG V G + P K + VA+K
Sbjct: 10 FTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLK----VPGK--REICVAIK 63
Query: 123 KLKPEGF--QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLF 180
LK G+ + +++L+E + +GQ HPN++ L G + + +++ E+M GSL+ L
Sbjct: 64 TLKA-GYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFL- 121
Query: 181 RRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAK 240
R+ + + + G G+ +L D + ++RD A NIL+++ K+SDFG+++
Sbjct: 122 RKNDGRFTVIQLVGMLRGIGSGMKYLSDMSA--VHRDLAARNILVNSNLVCKVSDFGMSR 179
Query: 241 AGPTGDRTHVSTQVMGTH---GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKT 297
D + G + APE +A + T+ SDV+S+G+V+ E++S
Sbjct: 180 V--LEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYG------ 231
Query: 298 KVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPR 356
+PY + + + ++ P L L C E RP+
Sbjct: 232 -----------ERPYWDMSNQDVIKAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPK 280
Query: 357 MSEVLAILERLEAPKNSAKLSQSE 380
+++ +L++L NS K + SE
Sbjct: 281 FGQIVNMLDKLIRNPNSLKRTGSE 304
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 105/201 (52%), Gaps = 17/201 (8%)
Query: 90 LGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHP 148
+G G FG V+ G W+++ VA+K ++ EG ++++ E + +L HP
Sbjct: 15 IGSGQFGLVHLGYWLNKDK-----------VAIKTIR-EGAMSEEDFIEEAEVMMKLSHP 62
Query: 149 NLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHD 208
LV+L G CLE LV+EFM G L ++L R + + + + +G+ +L
Sbjct: 63 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYLE- 120
Query: 209 AESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVAT 268
E+ VI+RD A N L+ K+SDFG+ + D+ ST +A+PE +
Sbjct: 121 -EASVIHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSF 178
Query: 269 GRLTTKSDVYSFGVVLLELLS 289
R ++KSDV+SFGV++ E+ S
Sbjct: 179 SRYSSKSDVWSFGVLMWEVFS 199
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 132/288 (45%), Gaps = 46/288 (15%)
Query: 87 DSLLGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQL 145
+ ++G G FG V K W + VA+K+++ E + K ++ E+ L ++
Sbjct: 13 EEVVGRGAFGVVCKAKWRAKD------------VAIKQIESESER--KAFIVELRQLSRV 58
Query: 146 HHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVR-MKVAIGAAKGLT 204
+HPN+VKL G CL LV E+ GSL N L P P A M + ++G+
Sbjct: 59 NHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVA 116
Query: 205 FLHDAESQ-VIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAA 262
+LH + + +I+RD K N+LL A K+ DFG A +TH+ T G+ + A
Sbjct: 117 YLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA----CDIQTHM-TNNKGSAAWMA 171
Query: 263 PEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRI 322
PE + K DV+S+G++L E+++ R KP+ FRI
Sbjct: 172 PEVFEGSNYSEKCDVFSWGIILWEVITRR------------------KPFDEIGGPAFRI 213
Query: 323 MDTKLGGQYP---QKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 367
M G P + +L +C + +P RP M E++ I+ L
Sbjct: 214 MWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHL 261
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 144/309 (46%), Gaps = 39/309 (12%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGF--QGHKEWLTEVN 140
N D ++G G FG V G + P+K + VA+K LK G+ + +++L E +
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKL----PSK--KEISVAIKTLKV-GYTEKQRRDFLGEAS 98
Query: 141 YLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI--G 198
+GQ HPN+++L G + + ++V E M GSL++ L + Q + V V + G
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ---FTVIQLVGMLRG 155
Query: 199 AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH 258
A G+ +L D + ++RD A NIL+++ K+SDFGL++ D + G
Sbjct: 156 IASGMKYLSDMGA--VHRDLAARNILINSNLVCKVSDFGLSRV--LEDDPEAAYTTRGGK 211
Query: 259 ---GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS- 314
+ +PE +A + T+ SDV+S+G+VL E++S +PY
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG-----------------ERPYWEM 254
Query: 315 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEAPKNSA 374
+ + + +D P L L C + RP+ ++++IL++L S
Sbjct: 255 SNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSL 314
Query: 375 KLSQSEPHR 383
K+ S R
Sbjct: 315 KIITSAAAR 323
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 129/279 (46%), Gaps = 31/279 (11%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
LG G +G VY+G ++SL+ VAVK LK + + +E+L E + ++ HPN
Sbjct: 19 LGGGQYGEVYEGVWKKYSLT---------VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 68
Query: 150 LVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDA 209
LV+L+G C ++ EFM G+L ++L Q +S V + +A + + +L
Sbjct: 69 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE-- 126
Query: 210 ESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATG 269
+ I+RD A N L+ K++DFGL++ TGD + APE +A
Sbjct: 127 KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTXTAHAGAKFPIKWTAPESLAYN 185
Query: 270 RLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLG 328
+ + KSDV++FGV+L E+ + G+ PY D +++ +++
Sbjct: 186 KFSIKSDVWAFGVLLWEIAT---------YGM--------SPYPGIDPSQVYELLEKDYR 228
Query: 329 GQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 367
+ P+ L C P RP +E+ E +
Sbjct: 229 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 267
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/204 (36%), Positives = 103/204 (50%), Gaps = 14/204 (6%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPE-GFQGHKEWLTEVNYLGQLHHP 148
LGEG FG V + P G+G +VAVK LK G Q W E+ L L+H
Sbjct: 16 LGEGHFGKV-----SLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHE 70
Query: 149 NLVKLIGYCLE-GENRL-LVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFL 206
++VK G C + GE + LV E++P GSL ++L R + A + A +G+ +L
Sbjct: 71 HIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPR---HCVGLAQLLLFAQQICEGMAYL 127
Query: 207 HDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTH-VSTQVMGTHGYAAPEY 265
H I+R A N+LLD + K+ DFGLAKA P G + V + APE
Sbjct: 128 H--AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPEC 185
Query: 266 VATGRLTTKSDVYSFGVVLLELLS 289
+ + SDV+SFGV L ELL+
Sbjct: 186 LKECKFYYASDVWSFGVTLYELLT 209
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/204 (36%), Positives = 103/204 (50%), Gaps = 14/204 (6%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPE-GFQGHKEWLTEVNYLGQLHHP 148
LGEG FG V + P G+G +VAVK LK G Q W E+ L L+H
Sbjct: 17 LGEGHFGKV-----SLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHE 71
Query: 149 NLVKLIGYCLE-GENRL-LVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFL 206
++VK G C + GE + LV E++P GSL ++L R + A + A +G+ +L
Sbjct: 72 HIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPR---HCVGLAQLLLFAQQICEGMAYL 128
Query: 207 HDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTH-VSTQVMGTHGYAAPEY 265
H I+R A N+LLD + K+ DFGLAKA P G + V + APE
Sbjct: 129 H--AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPEC 186
Query: 266 VATGRLTTKSDVYSFGVVLLELLS 289
+ + SDV+SFGV L ELL+
Sbjct: 187 LKECKFYYASDVWSFGVTLYELLT 210
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 104/201 (51%), Gaps = 17/201 (8%)
Query: 90 LGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHP 148
+G G FG V+ G W+++ VA+K +K EG +++ E + +L HP
Sbjct: 35 IGSGQFGLVHLGYWLNKDK-----------VAIKTIK-EGSMSEDDFIEEAEVMMKLSHP 82
Query: 149 NLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHD 208
LV+L G CLE LV+EFM G L ++L R + + + + +G+ +L
Sbjct: 83 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYLE- 140
Query: 209 AESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVAT 268
E+ VI+RD A N L+ K+SDFG+ + D+ ST +A+PE +
Sbjct: 141 -EACVIHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSF 198
Query: 269 GRLTTKSDVYSFGVVLLELLS 289
R ++KSDV+SFGV++ E+ S
Sbjct: 199 SRYSSKSDVWSFGVLMWEVFS 219
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 129/279 (46%), Gaps = 31/279 (11%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
LG G +G VY+G ++SL+ VAVK LK + + +E+L E + ++ HPN
Sbjct: 21 LGGGQYGEVYEGVWKKYSLT---------VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 70
Query: 150 LVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDA 209
LV+L+G C ++ EFM G+L ++L Q +S V + +A + + +L
Sbjct: 71 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE-- 128
Query: 210 ESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATG 269
+ I+RD A N L+ K++DFGL++ TGD + APE +A
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYN 187
Query: 270 RLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLG 328
+ + KSDV++FGV+L E+ + G+ PY D +++ +++
Sbjct: 188 KFSIKSDVWAFGVLLWEIAT---------YGM--------SPYPGIDLSQVYELLEKDYR 230
Query: 329 GQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 367
+ P+ L C P RP +E+ E +
Sbjct: 231 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 129/279 (46%), Gaps = 31/279 (11%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
LG G +G VY+G ++SL+ VAVK LK + + +E+L E + ++ HPN
Sbjct: 26 LGGGQYGEVYEGVWKKYSLT---------VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 75
Query: 150 LVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDA 209
LV+L+G C ++ EFM G+L ++L Q +S V + +A + + +L
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE-- 133
Query: 210 ESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATG 269
+ I+RD A N L+ K++DFGL++ TGD + APE +A
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYN 192
Query: 270 RLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLG 328
+ + KSDV++FGV+L E+ + G+ PY D +++ +++
Sbjct: 193 KFSIKSDVWAFGVLLWEIAT---------YGM--------SPYPGIDLSQVYELLEKDYR 235
Query: 329 GQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 367
+ P+ L C P RP +E+ E +
Sbjct: 236 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 105/201 (52%), Gaps = 17/201 (8%)
Query: 90 LGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHP 148
+G G FG V+ G W+++ VA+K ++ EG ++++ E + +L HP
Sbjct: 15 IGSGQFGLVHLGYWLNKDK-----------VAIKTIR-EGAMSEEDFIEEAEVMMKLSHP 62
Query: 149 NLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHD 208
LV+L G CLE LV+EFM G L ++L R + + + + +G+ +L +
Sbjct: 63 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYLEE 121
Query: 209 AESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVAT 268
A VI+RD A N L+ K+SDFG+ + D+ ST +A+PE +
Sbjct: 122 A--CVIHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSF 178
Query: 269 GRLTTKSDVYSFGVVLLELLS 289
R ++KSDV+SFGV++ E+ S
Sbjct: 179 SRYSSKSDVWSFGVLMWEVFS 199
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 105/201 (52%), Gaps = 17/201 (8%)
Query: 90 LGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHP 148
+G G FG V+ G W+++ VA+K ++ EG ++++ E + +L HP
Sbjct: 13 IGSGQFGLVHLGYWLNKDK-----------VAIKTIR-EGAMSEEDFIEEAEVMMKLSHP 60
Query: 149 NLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHD 208
LV+L G CLE LV+EFM G L ++L R + + + + +G+ +L +
Sbjct: 61 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYLEE 119
Query: 209 AESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVAT 268
A VI+RD A N L+ K+SDFG+ + D+ ST +A+PE +
Sbjct: 120 A--CVIHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSF 176
Query: 269 GRLTTKSDVYSFGVVLLELLS 289
R ++KSDV+SFGV++ E+ S
Sbjct: 177 SRYSSKSDVWSFGVLMWEVFS 197
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 129/279 (46%), Gaps = 31/279 (11%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
LG G +G VY+G ++SL+ VAVK LK + + +E+L E + ++ HPN
Sbjct: 21 LGGGQYGEVYEGVWKKYSLT---------VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 70
Query: 150 LVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDA 209
LV+L+G C ++ EFM G+L ++L Q +S V + +A + + +L
Sbjct: 71 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE-- 128
Query: 210 ESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATG 269
+ I+RD A N L+ K++DFGL++ TGD + APE +A
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYN 187
Query: 270 RLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLG 328
+ + KSDV++FGV+L E+ + G+ PY D +++ +++
Sbjct: 188 KFSIKSDVWAFGVLLWEIAT---------YGM--------SPYPGIDLSQVYELLEKDYR 230
Query: 329 GQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 367
+ P+ L C P RP +E+ E +
Sbjct: 231 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 143/309 (46%), Gaps = 39/309 (12%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGF--QGHKEWLTEVN 140
N D ++G G FG V G + P+K + VA+K LK G+ + +++L E +
Sbjct: 17 NISIDKVVGAGEFGEVCSGRLKL----PSK--KEISVAIKTLKV-GYTEKQRRDFLGEAS 69
Query: 141 YLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI--G 198
+GQ HPN+++L G + + ++V E M GSL++ L + Q + V V + G
Sbjct: 70 IMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ---FTVIQLVGMLRG 126
Query: 199 AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH 258
A G+ +L D ++RD A NIL+++ K+SDFGL++ D + G
Sbjct: 127 IASGMKYLSDM--GYVHRDLAARNILINSNLVCKVSDFGLSRV--LEDDPEAAYTTRGGK 182
Query: 259 ---GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS- 314
+ +PE +A + T+ SDV+S+G+VL E++S +PY
Sbjct: 183 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG-----------------ERPYWEM 225
Query: 315 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEAPKNSA 374
+ + + +D P L L C + RP+ ++++IL++L S
Sbjct: 226 SNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSL 285
Query: 375 KLSQSEPHR 383
K+ S R
Sbjct: 286 KIITSAAAR 294
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 129/279 (46%), Gaps = 37/279 (13%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
LG G FG V+ ++H+ VAVK +KP G + +L E N + L H
Sbjct: 196 LGAGQFGEVWMATYNKHT----------KVAVKTMKP-GSMSVEAFLAEANVMKTLQHDK 244
Query: 150 LVKLIGYCLEGENRLLVYEFMPKGSLENHLFRR--GPQPLSWAVRMKVAIGAAKGLTFLH 207
LVKL + E ++ EFM KGSL + L QPL + I A+G+ F+
Sbjct: 245 LVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQI--AEGMAFIE 301
Query: 208 DAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVA 267
+ I+RD +A+NIL+ A K++DFGLA+ + T + APE +
Sbjct: 302 --QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIK-WTAPEAIN 358
Query: 268 TGRLTTKSDVYSFGVVLLELLS-GRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTK 326
G T KSDV+SFG++L+E+++ GR P +S+ ++ R ++
Sbjct: 359 FGSFTIKSDVWSFGILLMEIVTYGRIPY----------------PGMSNP-EVIRALERG 401
Query: 327 LGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILE 365
P+ + ++C N P+ RP + ++L+
Sbjct: 402 YRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLD 440
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 130/292 (44%), Gaps = 47/292 (16%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
LG G FG V+ ++H+ VAVK +KP G + +L E N + L H
Sbjct: 190 LGAGQFGEVWMATYNKHT----------KVAVKTMKP-GSMSVEAFLAEANVMKTLQHDK 238
Query: 150 LVKLIGYCLEGENRLLVYEFMPKGSLENHLFRR--GPQPLSWAVRMKVAIGAAKGLTFLH 207
LVKL + E ++ EFM KGSL + L QPL + I A+G+ F+
Sbjct: 239 LVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQI--AEGMAFIE 295
Query: 208 DAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVA 267
+ I+RD +A+NIL+ A K++DFGLA+ G + APE +
Sbjct: 296 --QRNYIHRDLRAANILVSASLVCKIADFGLARVGAK-----------FPIKWTAPEAIN 342
Query: 268 TGRLTTKSDVYSFGVVLLELLS-GRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTK 326
G T KSDV+SFG++L+E+++ GR P +S+ ++ R ++
Sbjct: 343 FGSFTIKSDVWSFGILLMEIVTYGRIPY----------------PGMSNP-EVIRALERG 385
Query: 327 LGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEAPKNSAKLSQ 378
P+ + ++C N P+ RP + ++L+ S Q
Sbjct: 386 YRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTATESQXQQQ 437
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 143/309 (46%), Gaps = 39/309 (12%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGF--QGHKEWLTEVN 140
N D ++G G FG V G + P+K + VA+K LK G+ + +++L E +
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKL----PSK--KEISVAIKTLKV-GYTEKQRRDFLGEAS 98
Query: 141 YLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI--G 198
+GQ HPN+++L G + + ++V E M GSL++ L + Q + V V + G
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ---FTVIQLVGMLRG 155
Query: 199 AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH 258
A G+ +L D ++RD A NIL+++ K+SDFGL++ D + G
Sbjct: 156 IASGMKYLSDM--GYVHRDLAARNILINSNLVCKVSDFGLSRV--LEDDPEAAYTTRGGK 211
Query: 259 ---GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS- 314
+ +PE +A + T+ SDV+S+G+VL E++S +PY
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG-----------------ERPYWEM 254
Query: 315 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEAPKNSA 374
+ + + +D P L L C + RP+ ++++IL++L S
Sbjct: 255 SNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSL 314
Query: 375 KLSQSEPHR 383
K+ S R
Sbjct: 315 KIITSAAAR 323
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 129/279 (46%), Gaps = 31/279 (11%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
LG G +G VY+G ++SL+ VAVK LK + + +E+L E + ++ HPN
Sbjct: 21 LGGGQYGEVYEGVWKKYSLT---------VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 70
Query: 150 LVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDA 209
LV+L+G C ++ EFM G+L ++L Q +S V + +A + + +L
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE-- 128
Query: 210 ESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATG 269
+ I+RD A N L+ K++DFGL++ TGD + APE +A
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYN 187
Query: 270 RLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLG 328
+ + KSDV++FGV+L E+ + G+ PY D +++ +++
Sbjct: 188 KFSIKSDVWAFGVLLWEIAT---------YGM--------SPYPGIDLSQVYELLEKDYR 230
Query: 329 GQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 367
+ P+ L C P RP +E+ E +
Sbjct: 231 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 105/201 (52%), Gaps = 17/201 (8%)
Query: 90 LGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHP 148
+G G FG V+ G W+++ VA+K ++ EG ++++ E + +L HP
Sbjct: 18 IGSGQFGLVHLGYWLNKDK-----------VAIKTIR-EGAMSEEDFIEEAEVMMKLSHP 65
Query: 149 NLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHD 208
LV+L G CLE LV+EFM G L ++L R + + + + +G+ +L +
Sbjct: 66 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYLEE 124
Query: 209 AESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVAT 268
A VI+RD A N L+ K+SDFG+ + D+ ST +A+PE +
Sbjct: 125 A--CVIHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSF 181
Query: 269 GRLTTKSDVYSFGVVLLELLS 289
R ++KSDV+SFGV++ E+ S
Sbjct: 182 SRYSSKSDVWSFGVLMWEVFS 202
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 129/279 (46%), Gaps = 31/279 (11%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
LG G +G VY+G ++SL+ VAVK LK + + +E+L E + ++ HPN
Sbjct: 21 LGGGQYGEVYEGVWKKYSLT---------VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 70
Query: 150 LVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDA 209
LV+L+G C ++ EFM G+L ++L Q +S V + +A + + +L
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE-- 128
Query: 210 ESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATG 269
+ I+RD A N L+ K++DFGL++ TGD + APE +A
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYN 187
Query: 270 RLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLG 328
+ + KSDV++FGV+L E+ + G+ PY D +++ +++
Sbjct: 188 KFSIKSDVWAFGVLLWEIAT---------YGM--------SPYPGIDLSQVYELLEKDYR 230
Query: 329 GQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 367
+ P+ L C P RP +E+ E +
Sbjct: 231 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 134/304 (44%), Gaps = 51/304 (16%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHK-EWLTEVNYLGQLHHP 148
+GEG FG V++ L P +P + +VAVK LK E + ++ E + + +P
Sbjct: 55 IGEGAFGRVFQA--RAPGLLPYEPFT--MVAVKMLKEEASADMQADFQREAALMAEFDNP 110
Query: 149 NLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRR-----------------------GPQ 185
N+VKL+G C G+ L++E+M G L N R GP
Sbjct: 111 NIVKLLGVCAVGKPMCLLFEYMAYGDL-NEFLRSMSPHTVCSLSHSDLSTRARVSSPGPP 169
Query: 186 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 245
PLS A ++ +A A G+ +L +E + ++RD N L+ K++DFGL++ +
Sbjct: 170 PLSCAEQLCIARQVAAGMAYL--SERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSA 227
Query: 246 DRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSL 305
D + PE + R TT+SDV+++GVVL E+ S G++
Sbjct: 228 DYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS---------YGLQ--- 275
Query: 306 VDWAKPY--LSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAI 363
PY ++ + ++ + D + P+ L C + P RP + I
Sbjct: 276 -----PYYGMAHEEVIYYVRDGNILAC-PENCPLELYNLMRLCWSKLPADRPSFCSIHRI 329
Query: 364 LERL 367
L+R+
Sbjct: 330 LQRM 333
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 129/279 (46%), Gaps = 31/279 (11%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
LG G +G VY+G ++SL+ VAVK LK + + +E+L E + ++ HPN
Sbjct: 19 LGGGQYGEVYEGVWKKYSLT---------VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 68
Query: 150 LVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDA 209
LV+L+G C ++ EFM G+L ++L Q +S V + +A + + +L
Sbjct: 69 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE-- 126
Query: 210 ESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATG 269
+ I+RD A N L+ K++DFGL++ TGD + APE +A
Sbjct: 127 KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTFTAHAGAKFPIKWTAPESLAYN 185
Query: 270 RLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLG 328
+ + KSDV++FGV+L E+ + G+ PY D +++ +++
Sbjct: 186 KFSIKSDVWAFGVLLWEIAT---------YGM--------SPYPGIDPSQVYELLEKDYR 228
Query: 329 GQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 367
+ P+ L C P RP +E+ E +
Sbjct: 229 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 267
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 129/279 (46%), Gaps = 31/279 (11%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
LG G +G VY+G ++SL+ VAVK LK + + +E+L E + ++ HPN
Sbjct: 22 LGGGQYGEVYEGVWKKYSLT---------VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 71
Query: 150 LVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDA 209
LV+L+G C ++ EFM G+L ++L Q ++ V + +A + + +L
Sbjct: 72 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 129
Query: 210 ESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATG 269
+ I+RD A N L+ K++DFGL++ TGD + APE +A
Sbjct: 130 KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTXTAHAGAKFPIKWTAPESLAYN 188
Query: 270 RLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLG 328
+ + KSDV++FGV+L E+ + G+ PY D +++ +++
Sbjct: 189 KFSIKSDVWAFGVLLWEIAT---------YGM--------SPYPGIDLSQVYELLEKDYR 231
Query: 329 GQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 367
+ P+ L C P RP +E+ E +
Sbjct: 232 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 270
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 129/279 (46%), Gaps = 31/279 (11%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
LG G +G VY+G ++SL+ VAVK LK + + +E+L E + ++ HPN
Sbjct: 228 LGGGQYGEVYEGVWKKYSLT---------VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 277
Query: 150 LVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDA 209
LV+L+G C ++ EFM G+L ++L Q +S V + +A + + +L
Sbjct: 278 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE-- 335
Query: 210 ESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATG 269
+ I+R+ A N L+ K++DFGL++ TGD + APE +A
Sbjct: 336 KKNFIHRNLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYN 394
Query: 270 RLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLG 328
+ + KSDV++FGV+L E+ + G+ PY D +++ +++
Sbjct: 395 KFSIKSDVWAFGVLLWEIAT---------YGM--------SPYPGIDLSQVYELLEKDYR 437
Query: 329 GQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 367
+ P+ L C P RP +E+ E +
Sbjct: 438 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 476
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 139/300 (46%), Gaps = 33/300 (11%)
Query: 87 DSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGF--QGHKEWLTEVNYLGQ 144
+ ++G G FG V +G + +P K S VA+K LK G+ + +E+L+E + +GQ
Sbjct: 21 EEVIGAGEFGEVCRGRLK----APGKKES--CVAIKTLKG-GYTERQRREFLSEASIMGQ 73
Query: 145 LHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLT 204
HPN+++L G +++ EFM G+L++ L R + + + G A G+
Sbjct: 74 FEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFL-RLNDGQFTVIQLVGMLRGIASGMR 132
Query: 205 FLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH---GYA 261
+L AE ++RD A NIL+++ K+SDFGL++ T +G +
Sbjct: 133 YL--AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWT 190
Query: 262 APEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLF 320
APE +A + T+ SD +S+G+V+ E++S +PY + +
Sbjct: 191 APEAIAFRKFTSASDAWSYGIVMWEVMSFG-----------------ERPYWDMSNQDVI 233
Query: 321 RIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEAPKNSAKLSQSE 380
++ P + L L C + RPR +V++ L+++ S K+ E
Sbjct: 234 NAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKMIRNPASLKIVARE 293
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 129/279 (46%), Gaps = 31/279 (11%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
LG G +G VY+G ++SL+ VAVK LK + + +E+L E + ++ HPN
Sbjct: 26 LGGGQYGEVYEGVWKKYSLT---------VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 75
Query: 150 LVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDA 209
LV+L+G C ++ EFM G+L ++L Q ++ V + +A + + +L
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 133
Query: 210 ESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATG 269
+ I+RD A N L+ K++DFGL++ TGD + APE +A
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTXTAHAGAKFPIKWTAPESLAYN 192
Query: 270 RLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLG 328
+ + KSDV++FGV+L E+ + G+ PY D +++ +++
Sbjct: 193 KFSIKSDVWAFGVLLWEIAT---------YGM--------SPYPGIDLSQVYELLEKDYR 235
Query: 329 GQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 367
+ P+ L C P RP +E+ E +
Sbjct: 236 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 129/279 (46%), Gaps = 31/279 (11%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
LG G +G VY+G ++SL+ VAVK LK + + +E+L E + ++ HPN
Sbjct: 26 LGGGQYGEVYEGVWKKYSLT---------VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 75
Query: 150 LVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDA 209
LV+L+G C ++ EFM G+L ++L Q ++ V + +A + + +L
Sbjct: 76 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 133
Query: 210 ESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATG 269
+ I+RD A N L+ K++DFGL++ TGD + APE +A
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYN 192
Query: 270 RLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLG 328
+ + KSDV++FGV+L E+ + G+ PY D +++ +++
Sbjct: 193 KFSIKSDVWAFGVLLWEIAT---------YGM--------SPYPGIDLSQVYELLEKDYR 235
Query: 329 GQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 367
+ P+ L C P RP +E+ E +
Sbjct: 236 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 131/282 (46%), Gaps = 33/282 (11%)
Query: 87 DSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH-KEWLTEVNYLGQL 145
+ ++G G FG VY G + + G + AVK L G ++LTE +
Sbjct: 34 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 87
Query: 146 HHPNLVKLIGYCLEGENR-LLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIG--AAKG 202
HPN++ L+G CL E L+V +M G L N + P V+ + G AKG
Sbjct: 88 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKG 144
Query: 203 LTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDR--THVSTQVMGTHGY 260
+ +L A + ++RD A N +LD +F K++DFGLA+ + H T +
Sbjct: 145 MKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKW 202
Query: 261 AAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLF 320
A E + T + TTKSDV+SFGV+L EL++ R A V V YL R+L
Sbjct: 203 MALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITV-----YLLQGRRLL 256
Query: 321 RIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLA 362
+ P+ + L+C + + ++RP SE+++
Sbjct: 257 Q----------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 288
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 101/204 (49%), Gaps = 13/204 (6%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
LG+G FG V + P + +G VVAVKKL+ + +++ E+ L L H N
Sbjct: 21 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 150 LVKLIGYCLEG--ENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLH 207
+VK G C N L+ EF+P GSL +L ++ + + ++ KG+ +L
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEFLPYGSLREYL-QKHKERIDHIKLLQYTSQICKGMEYL- 133
Query: 208 DAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH--GYAAPEY 265
+ I+RD NIL++ E K+ DFGL K P D+ + G + APE
Sbjct: 134 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 191
Query: 266 VATGRLTTKSDVYSFGVVLLELLS 289
+ + + SDV+SFGVVL EL +
Sbjct: 192 LTESKFSVASDVWSFGVVLYELFT 215
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 129/279 (46%), Gaps = 31/279 (11%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
LG G +G VY+G ++SL+ VAVK LK + + +E+L E + ++ HPN
Sbjct: 26 LGGGQYGEVYEGVWKKYSLT---------VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 75
Query: 150 LVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDA 209
LV+L+G C ++ EFM G+L ++L Q ++ V + +A + + +L
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 133
Query: 210 ESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATG 269
+ I+RD A N L+ K++DFGL++ TGD + APE +A
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYN 192
Query: 270 RLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLG 328
+ + KSDV++FGV+L E+ + G+ PY D +++ +++
Sbjct: 193 KFSIKSDVWAFGVLLWEIAT---------YGM--------SPYPGIDLSQVYELLEKDYR 235
Query: 329 GQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 367
+ P+ L C P RP +E+ E +
Sbjct: 236 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 102/204 (50%), Gaps = 13/204 (6%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
LG+G FG V + P + +G VVAVKKL+ + +++ E+ L L H N
Sbjct: 17 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 71
Query: 150 LVKLIGYCLEG--ENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLH 207
+VK G C N L+ E++P GSL ++L ++ + + ++ KG+ +L
Sbjct: 72 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL- 129
Query: 208 DAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH--GYAAPEY 265
+ I+RD NIL++ E K+ DFGL K P D+ + G + APE
Sbjct: 130 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 187
Query: 266 VATGRLTTKSDVYSFGVVLLELLS 289
+ + + SDV+SFGVVL EL +
Sbjct: 188 LTESKFSVASDVWSFGVVLYELFT 211
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 131/282 (46%), Gaps = 33/282 (11%)
Query: 87 DSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH-KEWLTEVNYLGQL 145
+ ++G G FG VY G + + G + AVK L G ++LTE +
Sbjct: 54 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 107
Query: 146 HHPNLVKLIGYCLEGENR-LLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIG--AAKG 202
HPN++ L+G CL E L+V +M G L N + P V+ + G AKG
Sbjct: 108 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKG 164
Query: 203 LTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGD--RTHVSTQVMGTHGY 260
+ +L A + ++RD A N +LD +F K++DFGLA+ + H T +
Sbjct: 165 MKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 222
Query: 261 AAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLF 320
A E + T + TTKSDV+SFGV+L EL++ R A V V YL R+L
Sbjct: 223 MALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITV-----YLLQGRRLL 276
Query: 321 RIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLA 362
+ P+ + L+C + + ++RP SE+++
Sbjct: 277 Q----------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 308
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 129/279 (46%), Gaps = 31/279 (11%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
LG G +G VY+G ++SL+ VAVK LK + + +E+L E + ++ HPN
Sbjct: 26 LGGGQYGEVYEGVWKKYSLT---------VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 75
Query: 150 LVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDA 209
LV+L+G C ++ EFM G+L ++L Q ++ V + +A + + +L
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 133
Query: 210 ESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATG 269
+ I+RD A N L+ K++DFGL++ TGD + APE +A
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYN 192
Query: 270 RLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLG 328
+ + KSDV++FGV+L E+ + G+ PY D +++ +++
Sbjct: 193 KFSIKSDVWAFGVLLWEIAT---------YGM--------SPYPGIDLSQVYELLEKDYR 235
Query: 329 GQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 367
+ P+ L C P RP +E+ E +
Sbjct: 236 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 131/282 (46%), Gaps = 33/282 (11%)
Query: 87 DSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH-KEWLTEVNYLGQL 145
+ ++G G FG VY G + + G + AVK L G ++LTE +
Sbjct: 53 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 106
Query: 146 HHPNLVKLIGYCLEGENR-LLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIG--AAKG 202
HPN++ L+G CL E L+V +M G L N + P V+ + G AKG
Sbjct: 107 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKG 163
Query: 203 LTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGD--RTHVSTQVMGTHGY 260
+ +L A + ++RD A N +LD +F K++DFGLA+ + H T +
Sbjct: 164 MKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 221
Query: 261 AAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLF 320
A E + T + TTKSDV+SFGV+L EL++ R A V V YL R+L
Sbjct: 222 MALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITV-----YLLQGRRLL 275
Query: 321 RIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLA 362
+ P+ + L+C + + ++RP SE+++
Sbjct: 276 Q----------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 307
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 129/279 (46%), Gaps = 31/279 (11%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
LG G +G VY+G ++SL+ VAVK LK + + +E+L E + ++ HPN
Sbjct: 25 LGGGQYGEVYEGVWKKYSLT---------VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 74
Query: 150 LVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDA 209
LV+L+G C ++ EFM G+L ++L Q ++ V + +A + + +L
Sbjct: 75 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 132
Query: 210 ESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATG 269
+ I+RD A N L+ K++DFGL++ TGD + APE +A
Sbjct: 133 KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYN 191
Query: 270 RLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLG 328
+ + KSDV++FGV+L E+ + G+ PY D +++ +++
Sbjct: 192 KFSIKSDVWAFGVLLWEIAT---------YGM--------SPYPGIDLSQVYELLEKDYR 234
Query: 329 GQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 367
+ P+ L C P RP +E+ E +
Sbjct: 235 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 273
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 102/204 (50%), Gaps = 13/204 (6%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
LG+G FG V + P + +G VVAVKKL+ + +++ E+ L L H N
Sbjct: 21 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 150 LVKLIGYCLEG--ENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLH 207
+VK G C N L+ E++P GSL ++L ++ + + ++ KG+ +L
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL- 133
Query: 208 DAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH--GYAAPEY 265
+ I+RD NIL++ E K+ DFGL K P D+ + G + APE
Sbjct: 134 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 191
Query: 266 VATGRLTTKSDVYSFGVVLLELLS 289
+ + + SDV+SFGVVL EL +
Sbjct: 192 LTESKFSVASDVWSFGVVLYELFT 215
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 102/204 (50%), Gaps = 13/204 (6%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
LG+G FG V + P + +G VVAVKKL+ + +++ E+ L L H N
Sbjct: 18 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 150 LVKLIGYCLEG--ENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLH 207
+VK G C N L+ E++P GSL ++L ++ + + ++ KG+ +L
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL- 130
Query: 208 DAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH--GYAAPEY 265
+ I+RD NIL++ E K+ DFGL K P D+ + G + APE
Sbjct: 131 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 188
Query: 266 VATGRLTTKSDVYSFGVVLLELLS 289
+ + + SDV+SFGVVL EL +
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFT 212
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 102/204 (50%), Gaps = 13/204 (6%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
LG+G FG V + P + +G VVAVKKL+ + +++ E+ L L H N
Sbjct: 16 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 70
Query: 150 LVKLIGYCLEG--ENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLH 207
+VK G C N L+ E++P GSL ++L ++ + + ++ KG+ +L
Sbjct: 71 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL- 128
Query: 208 DAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH--GYAAPEY 265
+ I+RD NIL++ E K+ DFGL K P D+ + G + APE
Sbjct: 129 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 186
Query: 266 VATGRLTTKSDVYSFGVVLLELLS 289
+ + + SDV+SFGVVL EL +
Sbjct: 187 LTESKFSVASDVWSFGVVLYELFT 210
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 139/300 (46%), Gaps = 33/300 (11%)
Query: 87 DSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGF--QGHKEWLTEVNYLGQ 144
+ ++G G FG V +G + +P K S VA+K LK G+ + +E+L+E + +GQ
Sbjct: 19 EEVIGAGEFGEVCRGRLK----APGKKES--CVAIKTLKG-GYTERQRREFLSEASIMGQ 71
Query: 145 LHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLT 204
HPN+++L G +++ EFM G+L++ L R + + + G A G+
Sbjct: 72 FEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFL-RLNDGQFTVIQLVGMLRGIASGMR 130
Query: 205 FLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH---GYA 261
+L AE ++RD A NIL+++ K+SDFGL++ T +G +
Sbjct: 131 YL--AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWT 188
Query: 262 APEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLF 320
APE +A + T+ SD +S+G+V+ E++S +PY + +
Sbjct: 189 APEAIAFRKFTSASDAWSYGIVMWEVMSFG-----------------ERPYWDMSNQDVI 231
Query: 321 RIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEAPKNSAKLSQSE 380
++ P + L L C + RPR +V++ L+++ S K+ E
Sbjct: 232 NAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKMIRNPASLKIVARE 291
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 131/282 (46%), Gaps = 33/282 (11%)
Query: 87 DSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH-KEWLTEVNYLGQL 145
+ ++G G FG VY G + + G + AVK L G ++LTE +
Sbjct: 32 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 85
Query: 146 HHPNLVKLIGYCLEGENR-LLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIG--AAKG 202
HPN++ L+G CL E L+V +M G L N + P V+ + G AKG
Sbjct: 86 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKG 142
Query: 203 LTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGD--RTHVSTQVMGTHGY 260
+ +L A + ++RD A N +LD +F K++DFGLA+ + H T +
Sbjct: 143 MKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 200
Query: 261 AAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLF 320
A E + T + TTKSDV+SFGV+L EL++ R A V V YL R+L
Sbjct: 201 MALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITV-----YLLQGRRLL 254
Query: 321 RIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLA 362
+ P+ + L+C + + ++RP SE+++
Sbjct: 255 Q----------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 286
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 131/282 (46%), Gaps = 33/282 (11%)
Query: 87 DSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH-KEWLTEVNYLGQL 145
+ ++G G FG VY G + + G + AVK L G ++LTE +
Sbjct: 35 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 88
Query: 146 HHPNLVKLIGYCLEGENR-LLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIG--AAKG 202
HPN++ L+G CL E L+V +M G L N + P V+ + G AKG
Sbjct: 89 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKG 145
Query: 203 LTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGD--RTHVSTQVMGTHGY 260
+ +L A + ++RD A N +LD +F K++DFGLA+ + H T +
Sbjct: 146 MKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 203
Query: 261 AAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLF 320
A E + T + TTKSDV+SFGV+L EL++ R A V V YL R+L
Sbjct: 204 MALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITV-----YLLQGRRLL 257
Query: 321 RIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLA 362
+ P+ + L+C + + ++RP SE+++
Sbjct: 258 Q----------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 289
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 102/204 (50%), Gaps = 13/204 (6%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
LG+G FG V + P + +G VVAVKKL+ + +++ E+ L L H N
Sbjct: 22 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 76
Query: 150 LVKLIGYCLEG--ENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLH 207
+VK G C N L+ E++P GSL ++L ++ + + ++ KG+ +L
Sbjct: 77 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL- 134
Query: 208 DAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH--GYAAPEY 265
+ I+RD NIL++ E K+ DFGL K P D+ + G + APE
Sbjct: 135 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 192
Query: 266 VATGRLTTKSDVYSFGVVLLELLS 289
+ + + SDV+SFGVVL EL +
Sbjct: 193 LTESKFSVASDVWSFGVVLYELFT 216
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 129/279 (46%), Gaps = 31/279 (11%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
LG G +G VY+G ++SL+ VAVK LK + + +E+L E + ++ HPN
Sbjct: 22 LGGGQYGEVYEGVWKKYSLT---------VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 71
Query: 150 LVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDA 209
LV+L+G C ++ EFM G+L ++L Q ++ V + +A + + +L
Sbjct: 72 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 129
Query: 210 ESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATG 269
+ I+RD A N L+ K++DFGL++ TGD + APE +A
Sbjct: 130 KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAPAGAKFPIKWTAPESLAYN 188
Query: 270 RLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLG 328
+ + KSDV++FGV+L E+ + G+ PY D +++ +++
Sbjct: 189 KFSIKSDVWAFGVLLWEIAT---------YGM--------SPYPGIDLSQVYELLEKDYR 231
Query: 329 GQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 367
+ P+ L C P RP +E+ E +
Sbjct: 232 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 270
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 131/282 (46%), Gaps = 33/282 (11%)
Query: 87 DSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH-KEWLTEVNYLGQL 145
+ ++G G FG VY G + + G + AVK L G ++LTE +
Sbjct: 30 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 83
Query: 146 HHPNLVKLIGYCLEGENR-LLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIG--AAKG 202
HPN++ L+G CL E L+V +M G L N + P V+ + G AKG
Sbjct: 84 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKG 140
Query: 203 LTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGD--RTHVSTQVMGTHGY 260
+ +L A + ++RD A N +LD +F K++DFGLA+ + H T +
Sbjct: 141 MKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 198
Query: 261 AAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLF 320
A E + T + TTKSDV+SFGV+L EL++ R A V V YL R+L
Sbjct: 199 MALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITV-----YLLQGRRLL 252
Query: 321 RIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLA 362
+ P+ + L+C + + ++RP SE+++
Sbjct: 253 Q----------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 284
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 102/204 (50%), Gaps = 13/204 (6%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
LG+G FG V + P + +G VVAVKKL+ + +++ E+ L L H N
Sbjct: 23 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 77
Query: 150 LVKLIGYCLEG--ENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLH 207
+VK G C N L+ E++P GSL ++L ++ + + ++ KG+ +L
Sbjct: 78 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL- 135
Query: 208 DAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH--GYAAPEY 265
+ I+RD NIL++ E K+ DFGL K P D+ + G + APE
Sbjct: 136 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 193
Query: 266 VATGRLTTKSDVYSFGVVLLELLS 289
+ + + SDV+SFGVVL EL +
Sbjct: 194 LTESKFSVASDVWSFGVVLYELFT 217
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 131/282 (46%), Gaps = 33/282 (11%)
Query: 87 DSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH-KEWLTEVNYLGQL 145
+ ++G G FG VY G + + G + AVK L G ++LTE +
Sbjct: 27 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 80
Query: 146 HHPNLVKLIGYCLEGENR-LLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIG--AAKG 202
HPN++ L+G CL E L+V +M G L N + P V+ + G AKG
Sbjct: 81 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKG 137
Query: 203 LTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGD--RTHVSTQVMGTHGY 260
+ +L A + ++RD A N +LD +F K++DFGLA+ + H T +
Sbjct: 138 MKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 195
Query: 261 AAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLF 320
A E + T + TTKSDV+SFGV+L EL++ R A V V YL R+L
Sbjct: 196 MALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITV-----YLLQGRRLL 249
Query: 321 RIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLA 362
+ P+ + L+C + + ++RP SE+++
Sbjct: 250 Q----------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 281
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 102/204 (50%), Gaps = 13/204 (6%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
LG+G FG V + P + +G VVAVKKL+ + +++ E+ L L H N
Sbjct: 49 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 103
Query: 150 LVKLIGYCLEG--ENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLH 207
+VK G C N L+ E++P GSL ++L ++ + + ++ KG+ +L
Sbjct: 104 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL- 161
Query: 208 DAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH--GYAAPEY 265
+ I+RD NIL++ E K+ DFGL K P D+ + G + APE
Sbjct: 162 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 219
Query: 266 VATGRLTTKSDVYSFGVVLLELLS 289
+ + + SDV+SFGVVL EL +
Sbjct: 220 LTESKFSVASDVWSFGVVLYELFT 243
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 129/279 (46%), Gaps = 31/279 (11%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
LG G +G VY+G ++SL+ VAVK LK + + +E+L E + ++ HPN
Sbjct: 23 LGGGQYGEVYEGVWKKYSLT---------VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 72
Query: 150 LVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDA 209
LV+L+G C ++ EFM G+L ++L Q ++ V + +A + + +L
Sbjct: 73 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 130
Query: 210 ESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATG 269
+ I+RD A N L+ K++DFGL++ TGD + APE +A
Sbjct: 131 KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYN 189
Query: 270 RLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLG 328
+ + KSDV++FGV+L E+ + G+ PY D +++ +++
Sbjct: 190 KFSIKSDVWAFGVLLWEIAT---------YGM--------SPYPGIDLSQVYELLEKDYR 232
Query: 329 GQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 367
+ P+ L C P RP +E+ E +
Sbjct: 233 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 271
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 102/204 (50%), Gaps = 13/204 (6%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
LG+G FG V + P + +G VVAVKKL+ + +++ E+ L L H N
Sbjct: 18 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 150 LVKLIGYCLEG--ENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLH 207
+VK G C N L+ E++P GSL ++L ++ + + ++ KG+ +L
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL- 130
Query: 208 DAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH--GYAAPEY 265
+ I+RD NIL++ E K+ DFGL K P D+ + G + APE
Sbjct: 131 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEFFKVKEPGESPIFWYAPES 188
Query: 266 VATGRLTTKSDVYSFGVVLLELLS 289
+ + + SDV+SFGVVL EL +
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFT 212
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 131/282 (46%), Gaps = 33/282 (11%)
Query: 87 DSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH-KEWLTEVNYLGQL 145
+ ++G G FG VY G + + G + AVK L G ++LTE +
Sbjct: 34 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 87
Query: 146 HHPNLVKLIGYCLEGENR-LLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIG--AAKG 202
HPN++ L+G CL E L+V +M G L N + P V+ + G AKG
Sbjct: 88 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKG 144
Query: 203 LTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGD--RTHVSTQVMGTHGY 260
+ +L A + ++RD A N +LD +F K++DFGLA+ + H T +
Sbjct: 145 MKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 202
Query: 261 AAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLF 320
A E + T + TTKSDV+SFGV+L EL++ R A V V YL R+L
Sbjct: 203 MALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITV-----YLLQGRRLL 256
Query: 321 RIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLA 362
+ P+ + L+C + + ++RP SE+++
Sbjct: 257 Q----------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 288
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 131/282 (46%), Gaps = 33/282 (11%)
Query: 87 DSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH-KEWLTEVNYLGQL 145
+ ++G G FG VY G + + G + AVK L G ++LTE +
Sbjct: 33 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 86
Query: 146 HHPNLVKLIGYCLEGENR-LLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIG--AAKG 202
HPN++ L+G CL E L+V +M G L N + P V+ + G AKG
Sbjct: 87 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKG 143
Query: 203 LTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGD--RTHVSTQVMGTHGY 260
+ +L A + ++RD A N +LD +F K++DFGLA+ + H T +
Sbjct: 144 MKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 201
Query: 261 AAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLF 320
A E + T + TTKSDV+SFGV+L EL++ R A V V YL R+L
Sbjct: 202 MALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITV-----YLLQGRRLL 255
Query: 321 RIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLA 362
+ P+ + L+C + + ++RP SE+++
Sbjct: 256 Q----------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 287
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 102/204 (50%), Gaps = 13/204 (6%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
LG+G FG V + P + +G VVAVKKL+ + +++ E+ L L H N
Sbjct: 18 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 150 LVKLIGYCLEG--ENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLH 207
+VK G C N L+ E++P GSL ++L ++ + + ++ KG+ +L
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL- 130
Query: 208 DAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH--GYAAPEY 265
+ I+RD NIL++ E K+ DFGL K P D+ + G + APE
Sbjct: 131 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 188
Query: 266 VATGRLTTKSDVYSFGVVLLELLS 289
+ + + SDV+SFGVVL EL +
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFT 212
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 129/279 (46%), Gaps = 31/279 (11%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
LG G +G VY+G ++SL+ VAVK LK + + +E+L E + ++ HPN
Sbjct: 23 LGGGQYGEVYEGVWKKYSLT---------VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 72
Query: 150 LVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDA 209
LV+L+G C ++ EFM G+L ++L Q ++ V + +A + + +L
Sbjct: 73 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 130
Query: 210 ESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATG 269
+ I+RD A N L+ K++DFGL++ TGD + APE +A
Sbjct: 131 KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAPAGAKFPIKWTAPESLAYN 189
Query: 270 RLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLG 328
+ + KSDV++FGV+L E+ + G+ PY D +++ +++
Sbjct: 190 KFSIKSDVWAFGVLLWEIAT---------YGM--------SPYPGIDLSQVYELLEKDYR 232
Query: 329 GQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 367
+ P+ L C P RP +E+ E +
Sbjct: 233 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 271
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 131/282 (46%), Gaps = 33/282 (11%)
Query: 87 DSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH-KEWLTEVNYLGQL 145
+ ++G G FG VY G + + G + AVK L G ++LTE +
Sbjct: 35 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 88
Query: 146 HHPNLVKLIGYCLEGENR-LLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIG--AAKG 202
HPN++ L+G CL E L+V +M G L N + P V+ + G AKG
Sbjct: 89 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKG 145
Query: 203 LTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGD--RTHVSTQVMGTHGY 260
+ +L A + ++RD A N +LD +F K++DFGLA+ + H T +
Sbjct: 146 MKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 203
Query: 261 AAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLF 320
A E + T + TTKSDV+SFGV+L EL++ R A V V YL R+L
Sbjct: 204 MALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITV-----YLLQGRRLL 257
Query: 321 RIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLA 362
+ P+ + L+C + + ++RP SE+++
Sbjct: 258 Q----------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 289
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 129/279 (46%), Gaps = 31/279 (11%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
LG G +G VY+G ++SL+ VAVK LK + + +E+L E + ++ HPN
Sbjct: 23 LGGGQYGEVYEGVWKKYSLT---------VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 72
Query: 150 LVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDA 209
LV+L+G C ++ EFM G+L ++L Q ++ V + +A + + +L
Sbjct: 73 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 130
Query: 210 ESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATG 269
+ I+RD A N L+ K++DFGL++ TGD + APE +A
Sbjct: 131 KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYN 189
Query: 270 RLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLG 328
+ + KSDV++FGV+L E+ + G+ PY D +++ +++
Sbjct: 190 KFSIKSDVWAFGVLLWEIAT---------YGM--------SPYPGIDLSQVYELLEKDYR 232
Query: 329 GQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 367
+ P+ L C P RP +E+ E +
Sbjct: 233 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 271
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 102/204 (50%), Gaps = 13/204 (6%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
LG+G FG V + P + +G VVAVKKL+ + +++ E+ L L H N
Sbjct: 25 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 79
Query: 150 LVKLIGYCLEG--ENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLH 207
+VK G C N L+ E++P GSL ++L ++ + + ++ KG+ +L
Sbjct: 80 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL- 137
Query: 208 DAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH--GYAAPEY 265
+ I+RD NIL++ E K+ DFGL K P D+ + G + APE
Sbjct: 138 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 195
Query: 266 VATGRLTTKSDVYSFGVVLLELLS 289
+ + + SDV+SFGVVL EL +
Sbjct: 196 LTESKFSVASDVWSFGVVLYELFT 219
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 102/204 (50%), Gaps = 13/204 (6%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
LG+G FG V + P + +G VVAVKKL+ + +++ E+ L L H N
Sbjct: 24 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 78
Query: 150 LVKLIGYCLEG--ENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLH 207
+VK G C N L+ E++P GSL ++L ++ + + ++ KG+ +L
Sbjct: 79 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL- 136
Query: 208 DAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH--GYAAPEY 265
+ I+RD NIL++ E K+ DFGL K P D+ + G + APE
Sbjct: 137 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 194
Query: 266 VATGRLTTKSDVYSFGVVLLELLS 289
+ + + SDV+SFGVVL EL +
Sbjct: 195 LTESKFSVASDVWSFGVVLYELFT 218
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 129/279 (46%), Gaps = 31/279 (11%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
LG G +G VY+G ++SL+ VAVK LK + + +E+L E + ++ HPN
Sbjct: 21 LGGGQYGEVYEGVWKKYSLT---------VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 70
Query: 150 LVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDA 209
LV+L+G C ++ EFM G+L ++L Q ++ V + +A + + +L
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 128
Query: 210 ESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATG 269
+ I+RD A N L+ K++DFGL++ TGD + APE +A
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYN 187
Query: 270 RLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLG 328
+ + KSDV++FGV+L E+ + G+ PY D +++ +++
Sbjct: 188 KFSIKSDVWAFGVLLWEIAT---------YGM--------SPYPGIDLSQVYELLEKDYR 230
Query: 329 GQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 367
+ P+ L C P RP +E+ E +
Sbjct: 231 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 129/279 (46%), Gaps = 31/279 (11%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
LG G +G VY+G ++SL+ VAVK LK + + +E+L E + ++ HPN
Sbjct: 267 LGGGQYGEVYEGVWKKYSLT---------VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 316
Query: 150 LVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDA 209
LV+L+G C ++ EFM G+L ++L Q ++ V + +A + + +L
Sbjct: 317 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 374
Query: 210 ESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATG 269
+ I+R+ A N L+ K++DFGL++ TGD + APE +A
Sbjct: 375 KKNFIHRNLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYN 433
Query: 270 RLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLG 328
+ + KSDV++FGV+L E+ + G+ PY D +++ +++
Sbjct: 434 KFSIKSDVWAFGVLLWEIAT---------YGM--------SPYPGIDLSQVYELLEKDYR 476
Query: 329 GQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 367
+ P+ L C P RP +E+ E +
Sbjct: 477 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 515
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 102/204 (50%), Gaps = 13/204 (6%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
LG+G FG V + P + +G VVAVKKL+ + +++ E+ L L H N
Sbjct: 36 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 90
Query: 150 LVKLIGYCLEG--ENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLH 207
+VK G C N L+ E++P GSL ++L ++ + + ++ KG+ +L
Sbjct: 91 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL- 148
Query: 208 DAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH--GYAAPEY 265
+ I+RD NIL++ E K+ DFGL K P D+ + G + APE
Sbjct: 149 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 206
Query: 266 VATGRLTTKSDVYSFGVVLLELLS 289
+ + + SDV+SFGVVL EL +
Sbjct: 207 LTESKFSVASDVWSFGVVLYELFT 230
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 102/204 (50%), Gaps = 13/204 (6%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
LG+G FG V + P + +G VVAVKKL+ + +++ E+ L L H N
Sbjct: 36 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 90
Query: 150 LVKLIGYCLEG--ENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLH 207
+VK G C N L+ E++P GSL ++L ++ + + ++ KG+ +L
Sbjct: 91 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL- 148
Query: 208 DAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH--GYAAPEY 265
+ I+RD NIL++ E K+ DFGL K P D+ + G + APE
Sbjct: 149 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 206
Query: 266 VATGRLTTKSDVYSFGVVLLELLS 289
+ + + SDV+SFGVVL EL +
Sbjct: 207 LTESKFSVASDVWSFGVVLYELFT 230
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 129/279 (46%), Gaps = 31/279 (11%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
LG G +G VY+G ++SL+ VAVK LK + + +E+L E + ++ HPN
Sbjct: 34 LGGGQYGEVYEGVWKKYSLT---------VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 83
Query: 150 LVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDA 209
LV+L+G C ++ EFM G+L ++L Q ++ V + +A + + +L
Sbjct: 84 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 141
Query: 210 ESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATG 269
+ I+RD A N L+ K++DFGL++ TGD + APE +A
Sbjct: 142 KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYN 200
Query: 270 RLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLG 328
+ + KSDV++FGV+L E+ + G+ PY D +++ +++
Sbjct: 201 KFSIKSDVWAFGVLLWEIAT---------YGM--------SPYPGIDLSQVYELLEKDYR 243
Query: 329 GQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 367
+ P+ L C P RP +E+ E +
Sbjct: 244 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 282
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 129/279 (46%), Gaps = 31/279 (11%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
LG G +G VY+G ++SL+ VAVK LK + + +E+L E + ++ HPN
Sbjct: 21 LGGGQYGEVYEGVWKKYSLT---------VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 70
Query: 150 LVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDA 209
LV+L+G C ++ EFM G+L ++L Q ++ V + +A + + +L
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 128
Query: 210 ESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATG 269
+ I+RD A N L+ K++DFGL++ TGD + APE +A
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYN 187
Query: 270 RLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLG 328
+ + KSDV++FGV+L E+ + G+ PY D +++ +++
Sbjct: 188 KFSIKSDVWAFGVLLWEIAT---------YGM--------SPYPGIDLSQVYELLEKDYR 230
Query: 329 GQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 367
+ P+ L C P RP +E+ E +
Sbjct: 231 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 104/201 (51%), Gaps = 17/201 (8%)
Query: 90 LGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHP 148
+G G FG V+ G W+++ VA+K ++ EG ++++ E + +L HP
Sbjct: 16 IGSGQFGLVHLGYWLNKDK-----------VAIKTIR-EGAMSEEDFIEEAEVMMKLSHP 63
Query: 149 NLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHD 208
LV+L G CLE LV EFM G L ++L R + + + + +G+ +L
Sbjct: 64 KLVQLYGVCLEQAPICLVTEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYLE- 121
Query: 209 AESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVAT 268
E+ VI+RD A N L+ K+SDFG+ + D+ ST +A+PE +
Sbjct: 122 -EACVIHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSF 179
Query: 269 GRLTTKSDVYSFGVVLLELLS 289
R ++KSDV+SFGV++ E+ S
Sbjct: 180 SRYSSKSDVWSFGVLMWEVFS 200
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 103/204 (50%), Gaps = 13/204 (6%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
LG+G FG V + P + +G VVAVKKL+ + +++ E+ L L H N
Sbjct: 19 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 73
Query: 150 LVKLIGYCLEG--ENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLH 207
+VK G C N L+ E++P GSL ++L ++ + + ++ KG+ +L
Sbjct: 74 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL- 131
Query: 208 DAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH--GYAAPEY 265
+ I+R+ NIL++ E K+ DFGL K P D+ + + G + APE
Sbjct: 132 -GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQ-DKEYYKVKEPGESPIFWYAPES 189
Query: 266 VATGRLTTKSDVYSFGVVLLELLS 289
+ + + SDV+SFGVVL EL +
Sbjct: 190 LTESKFSVASDVWSFGVVLYELFT 213
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 139/298 (46%), Gaps = 37/298 (12%)
Query: 84 FRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGF--QGHKEWLTEVNY 141
+ + ++G G FG V G + P K + VA+K LK G+ + +++L E +
Sbjct: 45 IKIERVIGAGEFGEVCSGRLKL----PGK--RDVAVAIKTLKV-GYTEKQRRDFLCEASI 97
Query: 142 LGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI--GA 199
+GQ HPN+V L G G+ ++V EFM G+L+ L + Q + V V + G
Sbjct: 98 MGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQ---FTVIQLVGMLRGI 154
Query: 200 AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH- 258
A G+ +L A+ ++RD A NIL+++ K+SDFGL++ D V T G
Sbjct: 155 AAGMRYL--ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRV-IEDDPEAVYTTTGGKIP 211
Query: 259 -GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DK 316
+ APE + + T+ SDV+S+G+V+ E++S +PY
Sbjct: 212 VRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYG-----------------ERPYWDMSN 254
Query: 317 RKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEAPKNSA 374
+ + + ++ P L L C E RP+ +++ IL+++ NSA
Sbjct: 255 QDVIKAIEEGYRLPAPMDCPAGLHQLMLDCWQKERAERPKFEQIVGILDKMIRNPNSA 312
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 129/279 (46%), Gaps = 31/279 (11%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
LG G +G VY+G ++SL+ VAVK LK + + +E+L E + ++ HPN
Sbjct: 225 LGGGQYGEVYEGVWKKYSLT---------VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 274
Query: 150 LVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDA 209
LV+L+G C ++ EFM G+L ++L Q ++ V + +A + + +L
Sbjct: 275 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 332
Query: 210 ESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATG 269
+ I+R+ A N L+ K++DFGL++ TGD + APE +A
Sbjct: 333 KKNFIHRNLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYN 391
Query: 270 RLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLG 328
+ + KSDV++FGV+L E+ + G+ PY D +++ +++
Sbjct: 392 KFSIKSDVWAFGVLLWEIAT---------YGM--------SPYPGIDLSQVYELLEKDYR 434
Query: 329 GQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 367
+ P+ L C P RP +E+ E +
Sbjct: 435 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 473
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 101/204 (49%), Gaps = 13/204 (6%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
LG+G FG V + P + +G VVAVKKL+ + +++ E+ L L H N
Sbjct: 21 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 150 LVKLIGYCLEG--ENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLH 207
+VK G C N L+ E++P GSL ++L + + + ++ KG+ +L
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QAHAERIDHIKLLQYTSQICKGMEYL- 133
Query: 208 DAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH--GYAAPEY 265
+ I+RD NIL++ E K+ DFGL K P D+ + G + APE
Sbjct: 134 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 191
Query: 266 VATGRLTTKSDVYSFGVVLLELLS 289
+ + + SDV+SFGVVL EL +
Sbjct: 192 LTESKFSVASDVWSFGVVLYELFT 215
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 114/229 (49%), Gaps = 13/229 (5%)
Query: 59 SEGEILSSSNLKAFTFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMV 118
S G L + NL + ++ + + LG G +G VY G ++SL+
Sbjct: 9 SSGVDLGTENLYFQSMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLT--------- 59
Query: 119 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 178
VAVK LK + + +E+L E + ++ HPNLV+L+G C +V E+MP G+L ++
Sbjct: 60 VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDY 118
Query: 179 LFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGL 238
L + ++ V + +A + + +L + I+RD A N L+ K++DFGL
Sbjct: 119 LRECNREEVTAVVLLYMATQISSAMEYLE--KKNFIHRDLAARNCLVGENHVVKVADFGL 176
Query: 239 AKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLEL 287
++ TGD + APE +A + KSDV++FGV+L E+
Sbjct: 177 SRL-MTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEI 224
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/214 (36%), Positives = 115/214 (53%), Gaps = 27/214 (12%)
Query: 87 DSLLGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKL-KPEGFQGHKEWLTEVNYLGQ 144
D ++G+G FG VY G +IDQ + + A+K L + Q + +L E +
Sbjct: 26 DRVIGKGHFGVVYHGEYIDQAQ-------NRIQCAIKSLSRITEMQQVEAFLREGLLMRG 78
Query: 145 LHHPNLVKLIGYCL--EGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIG--AA 200
L+HPN++ LIG L EG +L+ +M G L F R PQ + V+ ++ G A
Sbjct: 79 LNHPNVLALIGIMLPPEGLPHVLL-PYMCHGDLLQ--FIRSPQR-NPTVKDLISFGLQVA 134
Query: 201 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG- 259
+G+ +L AE + ++RD A N +LD F K++DFGLA+ DR + S Q H
Sbjct: 135 RGMEYL--AEQKFVHRDLAARNCMLDESFTVKVADFGLAR--DILDREYYSVQ-QHRHAR 189
Query: 260 ----YAAPEYVATGRLTTKSDVYSFGVVLLELLS 289
+ A E + T R TTKSDV+SFGV+L ELL+
Sbjct: 190 LPVKWTALESLQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 135/286 (47%), Gaps = 47/286 (16%)
Query: 90 LGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHP 148
LG G FG V G W Q+ VAVK +K EG E+ E + +L HP
Sbjct: 16 LGSGQFGVVKLGKWKGQYD-----------VAVKMIK-EGSMSEDEFFQEAQTMMKLSHP 63
Query: 149 NLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHD 208
LVK G C + +V E++ G L N+L R + L + +++ +G+ FL
Sbjct: 64 KLVKFYGVCSKEYPIYIVTEYISNGCLLNYL-RSHGKGLEPSQLLEMCYDVCEGMAFLES 122
Query: 209 AESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH---GYAAPEY 265
Q I+RD A N L+D + K+SDFG+ + D +VS+ +GT ++APE
Sbjct: 123 --HQFIHRDLAARNCLVDRDLCVKVSDFGMTRY--VLDDQYVSS--VGTKFPVKWSAPEV 176
Query: 266 VATGRLTTKSDVYSFGVVLLELLS-GRCAVD---KTKVGIEQSLVDWAKPYLSDKRKLFR 321
+ ++KSDV++FG+++ E+ S G+ D ++V ++ +S +L+R
Sbjct: 177 FHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLK----------VSQGHRLYR 226
Query: 322 IMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 367
P A+ T + C + P+ RP ++L+ +E L
Sbjct: 227 ----------PHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPL 262
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 103/202 (50%), Gaps = 19/202 (9%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
LG G FG V+ G+ + H+ VAVK LK +G +L E N + QL H
Sbjct: 27 LGAGQFGEVWMGYYNGHT----------KVAVKSLK-QGSMSPDAFLAEANLMKQLQHQR 75
Query: 150 LVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVR--MKVAIGAAKGLTFLH 207
LV+L + E ++ E+M GSL + F + P + + + +A A+G+ F+
Sbjct: 76 LVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE 132
Query: 208 DAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVA 267
E I+RD +A+NIL+ + K++DFGLA+ + T + APE +
Sbjct: 133 --ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK-WTAPEAIN 189
Query: 268 TGRLTTKSDVYSFGVVLLELLS 289
G T KSDV+SFG++L E+++
Sbjct: 190 YGTFTIKSDVWSFGILLTEIVT 211
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 106/202 (52%), Gaps = 23/202 (11%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
+G+G FG V G G VAVK +K + + +L E + + QL H N
Sbjct: 14 IGKGEFGDVMLG-----------DYRGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSN 60
Query: 150 LVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHD 208
LV+L+G +E + L +V E+M KGSL ++L RG L +K ++ + + +L
Sbjct: 61 LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 120
Query: 209 AESQVIYRDFKASNILLDAEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTHGYAAPEYVA 267
+ ++RD A N+L+ + AK+SDFGL K A T D + + + APE +
Sbjct: 121 --NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK------WTAPEALR 172
Query: 268 TGRLTTKSDVYSFGVVLLELLS 289
+ +TKSDV+SFG++L E+ S
Sbjct: 173 EKKFSTKSDVWSFGILLWEIYS 194
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 106/202 (52%), Gaps = 23/202 (11%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
+G+G FG V G G VAVK +K + + +L E + + QL H N
Sbjct: 201 IGKGEFGDVMLG-----------DYRGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSN 247
Query: 150 LVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHD 208
LV+L+G +E + L +V E+M KGSL ++L RG L +K ++ + + +L
Sbjct: 248 LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 307
Query: 209 AESQVIYRDFKASNILLDAEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTHGYAAPEYVA 267
+ ++RD A N+L+ + AK+SDFGL K A T D + + + APE +
Sbjct: 308 --NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK------WTAPEALR 359
Query: 268 TGRLTTKSDVYSFGVVLLELLS 289
+ +TKSDV+SFG++L E+ S
Sbjct: 360 EKKFSTKSDVWSFGILLWEIYS 381
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 103/202 (50%), Gaps = 19/202 (9%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
LG G FG V+ G+ + H+ VAVK LK +G +L E N + QL H
Sbjct: 29 LGAGQFGEVWMGYYNGHT----------KVAVKSLK-QGSMSPDAFLAEANLMKQLQHQR 77
Query: 150 LVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVR--MKVAIGAAKGLTFLH 207
LV+L + E ++ E+M GSL + F + P + + + +A A+G+ F+
Sbjct: 78 LVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE 134
Query: 208 DAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVA 267
E I+RD +A+NIL+ + K++DFGLA+ + T + APE +
Sbjct: 135 --ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK-WTAPEAIN 191
Query: 268 TGRLTTKSDVYSFGVVLLELLS 289
G T KSDV+SFG++L E+++
Sbjct: 192 YGTFTIKSDVWSFGILLTEIVT 213
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 103/202 (50%), Gaps = 19/202 (9%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
LG G FG V+ G+ + H+ VAVK LK +G +L E N + QL H
Sbjct: 30 LGAGQFGEVWMGYYNGHT----------KVAVKSLK-QGSMSPDAFLAEANLMKQLQHQR 78
Query: 150 LVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVR--MKVAIGAAKGLTFLH 207
LV+L + E ++ E+M GSL + F + P + + + +A A+G+ F+
Sbjct: 79 LVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE 135
Query: 208 DAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVA 267
E I+RD +A+NIL+ + K++DFGLA+ + T + APE +
Sbjct: 136 --ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK-WTAPEAIN 192
Query: 268 TGRLTTKSDVYSFGVVLLELLS 289
G T KSDV+SFG++L E+++
Sbjct: 193 YGTFTIKSDVWSFGILLTEIVT 214
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 103/202 (50%), Gaps = 19/202 (9%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
LG G FG V+ G+ + H+ VAVK LK +G +L E N + QL H
Sbjct: 31 LGAGQFGEVWMGYYNGHT----------KVAVKSLK-QGSMSPDAFLAEANLMKQLQHQR 79
Query: 150 LVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVR--MKVAIGAAKGLTFLH 207
LV+L + E ++ E+M GSL + F + P + + + +A A+G+ F+
Sbjct: 80 LVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE 136
Query: 208 DAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVA 267
E I+RD +A+NIL+ + K++DFGLA+ + T + APE +
Sbjct: 137 --ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK-WTAPEAIN 193
Query: 268 TGRLTTKSDVYSFGVVLLELLS 289
G T KSDV+SFG++L E+++
Sbjct: 194 YGTFTIKSDVWSFGILLTEIVT 215
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 106/202 (52%), Gaps = 23/202 (11%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
+G+G FG V G G VAVK +K + + +L E + + QL H N
Sbjct: 29 IGKGEFGDVMLG-----------DYRGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSN 75
Query: 150 LVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHD 208
LV+L+G +E + L +V E+M KGSL ++L RG L +K ++ + + +L
Sbjct: 76 LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 135
Query: 209 AESQVIYRDFKASNILLDAEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTHGYAAPEYVA 267
+ ++RD A N+L+ + AK+SDFGL K A T D + + + APE +
Sbjct: 136 --NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK------WTAPEALR 187
Query: 268 TGRLTTKSDVYSFGVVLLELLS 289
+ +TKSDV+SFG++L E+ S
Sbjct: 188 EKKFSTKSDVWSFGILLWEIYS 209
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 103/202 (50%), Gaps = 19/202 (9%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
LG G FG V+ G+ + H+ VAVK LK +G +L E N + QL H
Sbjct: 21 LGAGQFGEVWMGYYNGHT----------KVAVKSLK-QGSMSPDAFLAEANLMKQLQHQR 69
Query: 150 LVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVR--MKVAIGAAKGLTFLH 207
LV+L + E ++ E+M GSL + F + P + + + +A A+G+ F+
Sbjct: 70 LVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 208 DAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVA 267
E I+RD +A+NIL+ + K++DFGLA+ + T + APE +
Sbjct: 127 --ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK-WTAPEAIN 183
Query: 268 TGRLTTKSDVYSFGVVLLELLS 289
G T KSDV+SFG++L E+++
Sbjct: 184 YGTFTIKSDVWSFGILLTEIVT 205
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 103/202 (50%), Gaps = 19/202 (9%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
LG G FG V+ G+ + H+ VAVK LK +G +L E N + QL H
Sbjct: 27 LGAGQFGEVWMGYYNGHT----------KVAVKSLK-QGSMSPDAFLAEANLMKQLQHQR 75
Query: 150 LVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVR--MKVAIGAAKGLTFLH 207
LV+L + E ++ E+M GSL + F + P + + + +A A+G+ F+
Sbjct: 76 LVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE 132
Query: 208 DAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVA 267
E I+RD +A+NIL+ + K++DFGLA+ + T + APE +
Sbjct: 133 --ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK-WTAPEAIN 189
Query: 268 TGRLTTKSDVYSFGVVLLELLS 289
G T KSDV+SFG++L E+++
Sbjct: 190 YGTFTIKSDVWSFGILLTEIVT 211
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 103/202 (50%), Gaps = 19/202 (9%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
LG G FG V+ G+ + H+ VAVK LK +G +L E N + QL H
Sbjct: 23 LGAGQFGEVWMGYYNGHT----------KVAVKSLK-QGSMSPDAFLAEANLMKQLQHQR 71
Query: 150 LVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVR--MKVAIGAAKGLTFLH 207
LV+L + E ++ E+M GSL + F + P + + + +A A+G+ F+
Sbjct: 72 LVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE 128
Query: 208 DAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVA 267
E I+RD +A+NIL+ + K++DFGLA+ + T + APE +
Sbjct: 129 --ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK-WTAPEAIN 185
Query: 268 TGRLTTKSDVYSFGVVLLELLS 289
G T KSDV+SFG++L E+++
Sbjct: 186 YGTFTIKSDVWSFGILLTEIVT 207
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 103/202 (50%), Gaps = 19/202 (9%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
LG G FG V+ G+ + H+ VAVK LK +G +L E N + QL H
Sbjct: 26 LGAGQFGEVWMGYYNGHT----------KVAVKSLK-QGSMSPDAFLAEANLMKQLQHQR 74
Query: 150 LVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVR--MKVAIGAAKGLTFLH 207
LV+L + E ++ E+M GSL + F + P + + + +A A+G+ F+
Sbjct: 75 LVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE 131
Query: 208 DAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVA 267
E I+RD +A+NIL+ + K++DFGLA+ + T + APE +
Sbjct: 132 --ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK-WTAPEAIN 188
Query: 268 TGRLTTKSDVYSFGVVLLELLS 289
G T KSDV+SFG++L E+++
Sbjct: 189 YGTFTIKSDVWSFGILLTEIVT 210
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 132/287 (45%), Gaps = 35/287 (12%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEG-FQGHKEWLTEVNYLGQLHHP 148
LG+G FG VY+G ++ K + VAVK + + E+L E + +
Sbjct: 25 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 149 NLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQ--------PLSWAVRMKVAIGAA 200
++V+L+G +G+ L+V E M G L+++L P+ P + +++A A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 201 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 260
G+ +L+ + ++RD A N ++ +F K+ DFG+ + D + + +
Sbjct: 141 DGMAYLN--AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 198
Query: 261 AAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPY--LSDKRK 318
APE + G TT SD++SFGVVL E+ SL + +PY LS+++
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEI---------------TSLAE--QPYQGLSNEQV 241
Query: 319 LFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILE 365
L +MD Q P L C PK+RP E++ +L+
Sbjct: 242 LKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 103/202 (50%), Gaps = 19/202 (9%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
LG G FG V+ G+ + H+ VAVK LK +G +L E N + QL H
Sbjct: 22 LGAGQFGEVWMGYYNGHT----------KVAVKSLK-QGSMSPDAFLAEANLMKQLQHQR 70
Query: 150 LVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVR--MKVAIGAAKGLTFLH 207
LV+L + E ++ E+M GSL + F + P + + + +A A+G+ F+
Sbjct: 71 LVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE 127
Query: 208 DAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVA 267
E I+RD +A+NIL+ + K++DFGLA+ + T + APE +
Sbjct: 128 --ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK-WTAPEAIN 184
Query: 268 TGRLTTKSDVYSFGVVLLELLS 289
G T KSDV+SFG++L E+++
Sbjct: 185 YGTFTIKSDVWSFGILLTEIVT 206
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 103/202 (50%), Gaps = 19/202 (9%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
LG G FG V+ G+ + H+ VAVK LK +G +L E N + QL H
Sbjct: 21 LGAGQFGEVWMGYYNGHT----------KVAVKSLK-QGSMSPDAFLAEANLMKQLQHQR 69
Query: 150 LVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVR--MKVAIGAAKGLTFLH 207
LV+L + E ++ E+M GSL + F + P + + + +A A+G+ F+
Sbjct: 70 LVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 208 DAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVA 267
E I+RD +A+NIL+ + K++DFGLA+ + T + APE +
Sbjct: 127 --ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK-WTAPEAIN 183
Query: 268 TGRLTTKSDVYSFGVVLLELLS 289
G T KSDV+SFG++L E+++
Sbjct: 184 YGTFTIKSDVWSFGILLTEIVT 205
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 132/287 (45%), Gaps = 35/287 (12%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEG-FQGHKEWLTEVNYLGQLHHP 148
LG+G FG VY+G ++ K + VAVK + + E+L E + +
Sbjct: 22 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 77
Query: 149 NLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQ--------PLSWAVRMKVAIGAA 200
++V+L+G +G+ L+V E M G L+++L P+ P + +++A A
Sbjct: 78 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 137
Query: 201 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 260
G+ +L+ + ++RD A N ++ +F K+ DFG+ + D + + +
Sbjct: 138 DGMAYLN--AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 195
Query: 261 AAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPY--LSDKRK 318
APE + G TT SD++SFGVVL E+ SL + +PY LS+++
Sbjct: 196 MAPESLKDGVFTTSSDMWSFGVVLWEI---------------TSLAE--QPYQGLSNEQV 238
Query: 319 LFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILE 365
L +MD Q P L C PK+RP E++ +L+
Sbjct: 239 LKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 284
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 103/202 (50%), Gaps = 19/202 (9%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
LG G FG V+ G+ + H+ VAVK LK +G +L E N + QL H
Sbjct: 16 LGAGQFGEVWMGYYNGHT----------KVAVKSLK-QGSMSPDAFLAEANLMKQLQHQR 64
Query: 150 LVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVR--MKVAIGAAKGLTFLH 207
LV+L + E ++ E+M GSL + F + P + + + +A A+G+ F+
Sbjct: 65 LVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE 121
Query: 208 DAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVA 267
E I+RD +A+NIL+ + K++DFGLA+ + T + APE +
Sbjct: 122 --ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK-WTAPEAIN 178
Query: 268 TGRLTTKSDVYSFGVVLLELLS 289
G T KSDV+SFG++L E+++
Sbjct: 179 YGTFTIKSDVWSFGILLTEIVT 200
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 140/303 (46%), Gaps = 35/303 (11%)
Query: 84 FRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGF--QGHKEWLTEVNY 141
+ + ++G G FG V G + P K + VA+K LK G+ + +++L+E +
Sbjct: 16 IKIEKVIGVGEFGEVCSGRLK----VPGK--REICVAIKTLKA-GYTDKQRRDFLSEASI 68
Query: 142 LGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAK 201
+GQ HPN++ L G + + +++ E+M GSL+ L R+ + + + G
Sbjct: 69 MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFL-RKNDGRFTVIQLVGMLRGIGS 127
Query: 202 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH--- 258
G+ +L D ++RD A NIL+++ K+SDFG+++ D + G
Sbjct: 128 GMKYLSDM--SYVHRDLAARNILVNSNLVCKVSDFGMSRV--LEDDPEAAYTTRGGKIPI 183
Query: 259 GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKR 317
+ APE +A + T+ SDV+S+G+V+ E++S +PY +
Sbjct: 184 RWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYG-----------------ERPYWDMSNQ 226
Query: 318 KLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEAPKNSAKLS 377
+ + ++ P L L C E RP+ +++ +L++L NS K +
Sbjct: 227 DVIKAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKLIRNPNSLKRT 286
Query: 378 QSE 380
SE
Sbjct: 287 GSE 289
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 138/297 (46%), Gaps = 37/297 (12%)
Query: 87 DSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGF--QGHKEWLTEVNYLGQ 144
+ ++G G FG V G H P K + VA+K LK G+ + +++L+E + +GQ
Sbjct: 12 EQVIGAGEFGEVCSG----HLKLPGK--REIFVAIKTLK-SGYTEKQRRDFLSEASIMGQ 64
Query: 145 LHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLT 204
HPN++ L G + +++ EFM GSL++ L R+ + + + G A G+
Sbjct: 65 FDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFL-RQNDGQFTVIQLVGMLRGIAAGMK 123
Query: 205 FLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAK--AGPTGDRTHVSTQVMGTH---G 259
+L A+ ++R A NIL+++ K+SDFGL++ T D T+ T +G
Sbjct: 124 YL--ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTY--TSALGGKIPIR 179
Query: 260 YAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRK 318
+ APE + + T+ SDV+S+G+V+ E++S +PY +
Sbjct: 180 WTAPEAIQYRKFTSASDVWSYGIVMWEVMSYG-----------------ERPYWDMTNQD 222
Query: 319 LFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEAPKNSAK 375
+ ++ P L L C + RP+ +++ L+++ NS K
Sbjct: 223 VINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRNPNSLK 279
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 141/303 (46%), Gaps = 35/303 (11%)
Query: 84 FRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGF--QGHKEWLTEVNY 141
+ + ++G G FG V G + P K + VA+K LK G+ + +++L+E +
Sbjct: 10 IKIEKVIGVGEFGEVCSGRLK----VPGK--REICVAIKTLKA-GYTDKQRRDFLSEASI 62
Query: 142 LGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAK 201
+GQ HPN++ L G + + +++ E+M GSL+ L R+ + + + G
Sbjct: 63 MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFL-RKNDGRFTVIQLVGMLRGIGS 121
Query: 202 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKA---GPTGDRTHVSTQVMGTH 258
G+ +L D ++RD A NIL+++ K+SDFG+++ P T ++
Sbjct: 122 GMKYLSDM--SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKI--PI 177
Query: 259 GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKR 317
+ APE +A + T+ SDV+S+G+V+ E++S +PY +
Sbjct: 178 RWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYG-----------------ERPYWDMSNQ 220
Query: 318 KLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEAPKNSAKLS 377
+ + ++ P L L C E RP+ +++ +L++L NS K +
Sbjct: 221 DVIKAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKLIRNPNSLKRT 280
Query: 378 QSE 380
SE
Sbjct: 281 GSE 283
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 105/202 (51%), Gaps = 23/202 (11%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
+G+G FG V G G VAVK +K + + +L E + + QL H N
Sbjct: 20 IGKGEFGDVMLG-----------DYRGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSN 66
Query: 150 LVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHD 208
LV+L+G +E + L +V E+M KGSL ++L RG L +K ++ + + +L
Sbjct: 67 LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 126
Query: 209 AESQVIYRDFKASNILLDAEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTHGYAAPEYVA 267
+ ++RD A N+L+ + AK+SDFGL K A T D + + + APE +
Sbjct: 127 --NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK------WTAPEALR 178
Query: 268 TGRLTTKSDVYSFGVVLLELLS 289
+TKSDV+SFG++L E+ S
Sbjct: 179 EAAFSTKSDVWSFGILLWEIYS 200
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 124/281 (44%), Gaps = 32/281 (11%)
Query: 87 DSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKE-WLTEVNYLGQL 145
+ +LGEG FG VY+G H G + VAVK K + +KE +++E + L
Sbjct: 29 NRILGEGFFGEVYEGVYTNHK------GEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNL 82
Query: 146 HHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTF 205
HP++VKLIG +E E ++ E P G L H R L + ++ K + +
Sbjct: 83 DHPHIVKLIGI-IEEEPTWIIMELYPYGEL-GHYLERNKNSLKVLTLVLYSLQICKAMAY 140
Query: 206 LHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEY 265
L ++RD NIL+ + KL DFGL++ D S + + +PE
Sbjct: 141 LESI--NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIK-WMSPES 197
Query: 266 VATGRLTTKSDVYSFGVVLLELLS-GRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIM 323
+ R TT SDV+ F V + E+LS G+ +P+ + + + ++
Sbjct: 198 INFRRFTTASDVWMFAVCMWEILSFGK------------------QPFFWLENKDVIGVL 239
Query: 324 DTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAIL 364
+ P TL +C + +P RPR +E++ L
Sbjct: 240 EKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSL 280
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 103/202 (50%), Gaps = 19/202 (9%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
LG G FG V+ G+ + H+ VAVK LK +G +L E N + QL H
Sbjct: 21 LGAGQFGEVWMGYYNGHT----------KVAVKSLK-QGSMSPDAFLAEANLMKQLQHQR 69
Query: 150 LVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVR--MKVAIGAAKGLTFLH 207
LV+L + E ++ E+M GSL + F + P + + + +A A+G+ F+
Sbjct: 70 LVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 208 DAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVA 267
E I+RD +A+NIL+ + K++DFGLA+ + T + APE +
Sbjct: 127 --ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK-WTAPEAIN 183
Query: 268 TGRLTTKSDVYSFGVVLLELLS 289
G T KSDV+SFG++L E+++
Sbjct: 184 YGTFTIKSDVWSFGILLTEIVT 205
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 150/331 (45%), Gaps = 36/331 (10%)
Query: 65 SSSNLKAFTFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL 124
S S + +E + A LG+G FG VY+G + K VA+K +
Sbjct: 2 SFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEG----VAKGVVKDEPETRVAIKTV 57
Query: 125 -KPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG 183
+ + E+L E + + + + ++V+L+G +G+ L++ E M +G L+++L
Sbjct: 58 NEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLR 117
Query: 184 PQ--------PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSD 235
P+ P S + +++A A G+ +L+ ++ ++RD A N ++ +F K+ D
Sbjct: 118 PEMENNPVLAPPSLSKMIQMAGEIADGMAYLN--ANKFVHRDLAARNCMVAEDFTVKIGD 175
Query: 236 FGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVD 295
FG+ + D + + + +PE + G TT SDV+SFGVVL E+
Sbjct: 176 FGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI-------- 227
Query: 296 KTKVGIEQSLVDWAKPY--LSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 353
+L + +PY LS+++ L +M+ L + P L C PK+
Sbjct: 228 -------ATLAE--QPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKM 277
Query: 354 RPRMSEVL-AILERLEAPKNSAKLSQSEPHR 383
RP E++ +I E +E SE ++
Sbjct: 278 RPSFLEIISSIKEEMEPGFREVSFYYSEENK 308
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 147/321 (45%), Gaps = 36/321 (11%)
Query: 75 NELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KPEGFQGHK 133
+E + A LG+G FG VY+G + K VA+K + + +
Sbjct: 3 DEWEVAREKITMSRELGQGSFGMVYEG----VAKGVVKDEPETRVAIKTVNEAASMRERI 58
Query: 134 EWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQ-------- 185
E+L E + + + + ++V+L+G +G+ L++ E M +G L+++L P+
Sbjct: 59 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 118
Query: 186 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 245
P S + +++A A G+ +L+ ++ ++RD A N ++ +F K+ DFG+ +
Sbjct: 119 PPSLSKMIQMAGEIADGMAYLN--ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXET 176
Query: 246 DRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSL 305
D + + + +PE + G TT SDV+SFGVVL E+ +L
Sbjct: 177 DXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------ATL 221
Query: 306 VDWAKPY--LSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL-A 362
+ +PY LS+++ L +M+ L + P L C PK+RP E++ +
Sbjct: 222 AE--QPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLLELMRMCWQYNPKMRPSFLEIISS 278
Query: 363 ILERLEAPKNSAKLSQSEPHR 383
I E +E SE ++
Sbjct: 279 IKEEMEPGFREVSFYYSEENK 299
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 124/281 (44%), Gaps = 32/281 (11%)
Query: 87 DSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKE-WLTEVNYLGQL 145
+ +LGEG FG VY+G H G + VAVK K + +KE +++E + L
Sbjct: 13 NRILGEGFFGEVYEGVYTNHK------GEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNL 66
Query: 146 HHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTF 205
HP++VKLIG +E E ++ E P G L H R L + ++ K + +
Sbjct: 67 DHPHIVKLIGI-IEEEPTWIIMELYPYGEL-GHYLERNKNSLKVLTLVLYSLQICKAMAY 124
Query: 206 LHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEY 265
L ++RD NIL+ + KL DFGL++ D S + + +PE
Sbjct: 125 LESI--NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIK-WMSPES 181
Query: 266 VATGRLTTKSDVYSFGVVLLELLS-GRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIM 323
+ R TT SDV+ F V + E+LS G+ +P+ + + + ++
Sbjct: 182 INFRRFTTASDVWMFAVCMWEILSFGK------------------QPFFWLENKDVIGVL 223
Query: 324 DTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAIL 364
+ P TL +C + +P RPR +E++ L
Sbjct: 224 EKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSL 264
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 149/329 (45%), Gaps = 36/329 (10%)
Query: 67 SNLKAFTFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-K 125
S F +E + A LG+G FG VY+G + K VA+K + +
Sbjct: 1 SAADVFVPDEWEVAREKITMSRELGQGSFGMVYEG----VAKGVVKDEPETRVAIKTVNE 56
Query: 126 PEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQ 185
+ E+L E + + + + ++V+L+G +G+ L++ E M +G L+++L P+
Sbjct: 57 AASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE 116
Query: 186 --------PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFG 237
P S + +++A A G+ +L+ ++ ++RD A N ++ +F K+ DFG
Sbjct: 117 MENNPVLAPPSLSKMIQMAGEIADGMAYLN--ANKFVHRDLAARNCMVAEDFTVKIGDFG 174
Query: 238 LAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKT 297
+ + D + + + +PE + G TT SDV+SFGVVL E+
Sbjct: 175 MTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------- 224
Query: 298 KVGIEQSLVDWAKPY--LSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRP 355
+L + +PY LS+++ L +M+ L + P L C PK+RP
Sbjct: 225 -----ATLAE--QPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRP 276
Query: 356 RMSEVL-AILERLEAPKNSAKLSQSEPHR 383
E++ +I E +E SE ++
Sbjct: 277 SFLEIISSIKEEMEPGFREVSFYYSEENK 305
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 124/281 (44%), Gaps = 32/281 (11%)
Query: 87 DSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKE-WLTEVNYLGQL 145
+ +LGEG FG VY+G H G + VAVK K + +KE +++E + L
Sbjct: 17 NRILGEGFFGEVYEGVYTNHK------GEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNL 70
Query: 146 HHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTF 205
HP++VKLIG +E E ++ E P G L H R L + ++ K + +
Sbjct: 71 DHPHIVKLIGI-IEEEPTWIIMELYPYGEL-GHYLERNKNSLKVLTLVLYSLQICKAMAY 128
Query: 206 LHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEY 265
L ++RD NIL+ + KL DFGL++ D S + + +PE
Sbjct: 129 LESI--NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIK-WMSPES 185
Query: 266 VATGRLTTKSDVYSFGVVLLELLS-GRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIM 323
+ R TT SDV+ F V + E+LS G+ +P+ + + + ++
Sbjct: 186 INFRRFTTASDVWMFAVCMWEILSFGK------------------QPFFWLENKDVIGVL 227
Query: 324 DTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAIL 364
+ P TL +C + +P RPR +E++ L
Sbjct: 228 EKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSL 268
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 132/287 (45%), Gaps = 35/287 (12%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEG-FQGHKEWLTEVNYLGQLHHP 148
LG+G FG VY+G ++ K + VAVK + + E+L E + +
Sbjct: 25 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 149 NLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQ--------PLSWAVRMKVAIGAA 200
++V+L+G +G+ L+V E M G L+++L P+ P + +++A A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 201 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 260
G+ +L+ + ++RD A N ++ +F K+ DFG+ + D + + +
Sbjct: 141 DGMAYLN--AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 198
Query: 261 AAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPY--LSDKRK 318
APE + G TT SD++SFGVVL E+ SL + +PY LS+++
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEI---------------TSLAE--QPYQGLSNEQV 241
Query: 319 LFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILE 365
L +MD Q P L C PK+RP E++ +L+
Sbjct: 242 LKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 113/241 (46%), Gaps = 27/241 (11%)
Query: 59 SEGEILSSSNLKAFTFNELKTATRNFRPDSL------LGEGGFGFVYKGWIDQHSLSPAK 112
S G L + NL + + + TR+ P+ LG+G FG VYK
Sbjct: 8 SSGVDLGTENLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKA---------QN 58
Query: 113 PGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPK 172
+ ++ A K + + + ++++ E++ L HPN+VKL+ N ++ EF
Sbjct: 59 KETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 118
Query: 173 GSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAK 232
G+++ + +PL+ + V L +LHD +++I+RD KA NIL + + K
Sbjct: 119 GAVDAVMLEL-ERPLTESQIQVVCKQTLDALNYLHD--NKIIHRDLKAGNILFTLDGDIK 175
Query: 233 LSDFGL-AKAGPTGDRTHVSTQVMGTHGYAAPEYVATGR-----LTTKSDVYSFGVVLLE 286
L+DFG+ AK T R +GT + APE V K+DV+S G+ L+E
Sbjct: 176 LADFGVSAKNTRTIQR---RDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIE 232
Query: 287 L 287
+
Sbjct: 233 M 233
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 132/287 (45%), Gaps = 35/287 (12%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEG-FQGHKEWLTEVNYLGQLHHP 148
LG+G FG VY+G ++ K + VAVK + + E+L E + +
Sbjct: 24 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 79
Query: 149 NLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQ--------PLSWAVRMKVAIGAA 200
++V+L+G +G+ L+V E M G L+++L P+ P + +++A A
Sbjct: 80 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 139
Query: 201 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 260
G+ +L+ + ++RD A N ++ +F K+ DFG+ + D + + +
Sbjct: 140 DGMAYLN--AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 197
Query: 261 AAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPY--LSDKRK 318
APE + G TT SD++SFGVVL E+ SL + +PY LS+++
Sbjct: 198 MAPESLKDGVFTTSSDMWSFGVVLWEI---------------TSLAE--QPYQGLSNEQV 240
Query: 319 LFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILE 365
L +MD Q P L C PK+RP E++ +L+
Sbjct: 241 LKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 286
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 131/287 (45%), Gaps = 35/287 (12%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEG-FQGHKEWLTEVNYLGQLHHP 148
LG+G FG VY+G ++ K + VAVK + + E+L E + +
Sbjct: 25 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 149 NLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQ--------PLSWAVRMKVAIGAA 200
++V+L+G +G+ L+V E M G L+++L P+ P + +++A A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 201 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 260
G+ +L+ + ++RD A N ++ +F K+ DFG+ + D + + +
Sbjct: 141 DGMAYLN--AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 198
Query: 261 AAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPY--LSDKRK 318
APE + G TT SD++SFGVVL E+ SL + +PY LS+++
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEI---------------TSLAE--QPYQGLSNEQV 241
Query: 319 LFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILE 365
L +MD Q P L C P +RP E++ +L+
Sbjct: 242 LKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 287
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 150/327 (45%), Gaps = 37/327 (11%)
Query: 75 NELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KPEGFQGHK 133
+E + A LG+G FG VY+G + K VA+K + + +
Sbjct: 11 DEWEVAREKITMSRELGQGSFGMVYEG----VAKGVVKDEPETRVAIKTVNEAASMRERI 66
Query: 134 EWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQ-------- 185
E+L E + + + + ++V+L+G +G+ L++ E M +G L+++L P+
Sbjct: 67 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 126
Query: 186 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 245
P S + +++A A G+ +L+ ++ ++RD A N ++ +F K+ DFG+ +
Sbjct: 127 PPSLSKMIQMAGEIADGMAYLN--ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 184
Query: 246 DRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSL 305
D + + + +PE + G TT SDV+SFGVVL E+ +L
Sbjct: 185 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------ATL 229
Query: 306 VDWAKPY--LSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL-A 362
+ +PY LS+++ L +M+ L + P L C PK+RP E++ +
Sbjct: 230 AE--QPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 286
Query: 363 ILERLEAPKNSAKLSQSEPHR-QTGPV 388
I E +E SE ++ + PV
Sbjct: 287 IKEEMEPGFREVSFYYSEENKMENNPV 313
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 148/325 (45%), Gaps = 36/325 (11%)
Query: 75 NELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KPEGFQGHK 133
+E + A LG+G FG VY+G + K VA+K + + +
Sbjct: 18 DEWEVAREKITMSRELGQGSFGMVYEG----VAKGVVKDEPETRVAIKTVNEAASMRERI 73
Query: 134 EWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQ-------- 185
E+L E + + + + ++V+L+G +G+ L++ E M +G L+++L P+
Sbjct: 74 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 133
Query: 186 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 245
P S + +++A A G+ +L+ ++ ++RD A N ++ +F K+ DFG+ +
Sbjct: 134 PPSLSKMIQMAGEIADGMAYLN--ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 191
Query: 246 DRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSL 305
D + + + +PE + G TT SDV+SFGVVL E+ +L
Sbjct: 192 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------ATL 236
Query: 306 VDWAKPY--LSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL-A 362
+ +PY LS+++ L +M+ L + P L C PK+RP E++ +
Sbjct: 237 AE--QPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 293
Query: 363 ILERLEAPKNSAKLSQSEPHRQTGP 387
I E +E SE ++ P
Sbjct: 294 IKEEMEPGFREVSFYYSEENKLPEP 318
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 150/331 (45%), Gaps = 36/331 (10%)
Query: 65 SSSNLKAFTFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL 124
S S + +E + A LG+G FG VY+G + K VA+K +
Sbjct: 2 SFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEG----VAKGVVKDEPETRVAIKTV 57
Query: 125 -KPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG 183
+ + E+L E + + + + ++V+L+G +G+ L++ E M +G L+++L
Sbjct: 58 NEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLR 117
Query: 184 PQ--------PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSD 235
P+ P S + +++A A G+ +L+ ++ ++RD A N ++ +F K+ D
Sbjct: 118 PEMENNPVLAPPSLSKMIQMAGEIADGMAYLN--ANKFVHRDLAARNCMVAEDFTVKIGD 175
Query: 236 FGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVD 295
FG+ + D + + + +PE + G TT SDV+SFGVVL E+
Sbjct: 176 FGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI-------- 227
Query: 296 KTKVGIEQSLVDWAKPY--LSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 353
+L + +PY LS+++ L +M+ L + P L C PK+
Sbjct: 228 -------ATLAE--QPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKM 277
Query: 354 RPRMSEVL-AILERLEAPKNSAKLSQSEPHR 383
RP E++ +I E +E SE ++
Sbjct: 278 RPSFLEIISSIKEEMEPGFREVSFYYSEENK 308
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 118/225 (52%), Gaps = 27/225 (12%)
Query: 77 LKTATRNFRPDSL-----LGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLKPE-GF 129
+K R F+ L LG G FG V+KG WI P + V +K ++ + G
Sbjct: 3 MKVLARIFKETELRKLKVLGSGVFGTVHKGVWI------PEGESIKIPVCIKVIEDKSGR 56
Query: 130 QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRR----GPQ 185
Q + + +G L H ++V+L+G C G + LV +++P GSL +H+ + GPQ
Sbjct: 57 QSFQAVTDHMLAIGSLDHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQ 115
Query: 186 PL-SWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPT 244
L +W V++ AKG+ +L E +++R+ A N+LL + +++DFG+A P
Sbjct: 116 LLLNWGVQI------AKGMYYLE--EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPP 167
Query: 245 GDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 289
D+ + ++ + A E + G+ T +SDV+S+GV + EL++
Sbjct: 168 DDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 104/210 (49%), Gaps = 19/210 (9%)
Query: 89 LLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHK--EWLTEVNYLGQLH 146
+LGEG FG V +G + Q G+ + VAVK +K + + E+L+E +
Sbjct: 41 ILGEGEFGSVMEGNLKQED------GTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFS 94
Query: 147 HPNLVKLIGYCLEGENR-----LLVYEFMPKGSLENHL----FRRGPQPLSWAVRMKVAI 197
HPN+++L+G C+E ++ +++ FM G L +L GP+ + +K +
Sbjct: 95 HPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMV 154
Query: 198 GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 257
A G+ +L + ++RD A N +L + ++DFGL+K +GD
Sbjct: 155 DIALGMEYL--SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMP 212
Query: 258 HGYAAPEYVATGRLTTKSDVYSFGVVLLEL 287
+ A E +A T+KSDV++FGV + E+
Sbjct: 213 VKWIAIESLADRVYTSKSDVWAFGVTMWEI 242
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 103/202 (50%), Gaps = 19/202 (9%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
LG G FG V+ G+ + H+ VAVK LK +G +L E N + QL H
Sbjct: 17 LGAGQFGEVWMGYYNGHT----------KVAVKSLK-QGSMSPDAFLAEANLMKQLQHQR 65
Query: 150 LVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVR--MKVAIGAAKGLTFLH 207
LV+L + E ++ E+M GSL + F + P + + + +A A+G+ F+
Sbjct: 66 LVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE 122
Query: 208 DAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVA 267
E I+R+ +A+NIL+ + K++DFGLA+ + T + APE +
Sbjct: 123 --ERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK-WTAPEAIN 179
Query: 268 TGRLTTKSDVYSFGVVLLELLS 289
G T KSDV+SFG++L E+++
Sbjct: 180 YGTFTIKSDVWSFGILLTEIVT 201
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 100/202 (49%), Gaps = 16/202 (7%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
LGEG +G VYK +G +VA+K++ E +E + E++ + Q P+
Sbjct: 37 LGEGSYGSVYKA---------IHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPH 85
Query: 150 LVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDA 209
+VK G + + +V E+ GS+ + + R + L+ + KGL +LH
Sbjct: 86 VVKYYGSYFKNTDLWIVMEYCGAGSVSD-IIRLRNKTLTEDEIATILQSTLKGLEYLHFM 144
Query: 210 ESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATG 269
I+RD KA NILL+ E +AKL+DFG+ AG D V+GT + APE +
Sbjct: 145 RK--IHRDIKAGNILLNTEGHAKLADFGV--AGQLTDXMAKRNXVIGTPFWMAPEVIQEI 200
Query: 270 RLTTKSDVYSFGVVLLELLSGR 291
+D++S G+ +E+ G+
Sbjct: 201 GYNCVADIWSLGITAIEMAEGK 222
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 114/214 (53%), Gaps = 22/214 (10%)
Query: 83 NFRPDSLLGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLKPE-GFQGHKEWLTEVN 140
R +LG G FG V+KG WI P + V +K ++ + G Q + +
Sbjct: 32 ELRKLKVLGSGVFGTVHKGVWI------PEGESIKIPVCIKVIEDKSGRQSFQAVTDHML 85
Query: 141 YLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRR----GPQPL-SWAVRMKV 195
+G L H ++V+L+G C G + LV +++P GSL +H+ + GPQ L +W V++
Sbjct: 86 AIGSLDHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI-- 142
Query: 196 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVM 255
AKG+ +L E +++R+ A N+LL + +++DFG+A P D+ + ++
Sbjct: 143 ----AKGMYYLE--EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAK 196
Query: 256 GTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 289
+ A E + G+ T +SDV+S+GV + EL++
Sbjct: 197 TPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 147/321 (45%), Gaps = 36/321 (11%)
Query: 75 NELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KPEGFQGHK 133
+E + A LG+G FG VY+G + K VA+K + + +
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEG----VAKGVVKDEPETRVAIKTVNEAASMRERI 60
Query: 134 EWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQ-------- 185
E+L E + + + + ++V+L+G +G+ L++ E M +G L+++L P+
Sbjct: 61 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 120
Query: 186 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 245
P S + +++A A G+ +L+ ++ ++RD A N ++ +F K+ DFG+ +
Sbjct: 121 PPSLSKMIQMAGEIADGMAYLN--ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 178
Query: 246 DRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSL 305
D + + + +PE + G TT SDV+SFGVVL E+ +L
Sbjct: 179 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------ATL 223
Query: 306 VDWAKPY--LSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL-A 362
+ +PY LS+++ L +M+ L + P L C PK+RP E++ +
Sbjct: 224 AE--QPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 280
Query: 363 ILERLEAPKNSAKLSQSEPHR 383
I E +E SE ++
Sbjct: 281 IKEEMEPGFREVSFYYSEENK 301
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 111/208 (53%), Gaps = 22/208 (10%)
Query: 89 LLGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKL-KPEGFQGHKEWLTEVNYLGQLH 146
+LG G FG VYKG W+ P + VA+K L + G + + E++ E + +
Sbjct: 45 VLGSGAFGTVYKGIWV------PEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMD 98
Query: 147 HPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRR----GPQPL-SWAVRMKVAIGAAK 201
HP+LV+L+G CL +L V + MP G L ++ G Q L +W V++ AK
Sbjct: 99 HPHLVRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQI------AK 151
Query: 202 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 261
G+ +L E ++++RD A N+L+ + + K++DFGLA+ ++ + + +
Sbjct: 152 GMMYLE--ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWM 209
Query: 262 APEYVATGRLTTKSDVYSFGVVLLELLS 289
A E + + T +SDV+S+GV + EL++
Sbjct: 210 ALECIHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 147/321 (45%), Gaps = 36/321 (11%)
Query: 75 NELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KPEGFQGHK 133
+E + A LG+G FG VY+G + K VA+K + + +
Sbjct: 11 DEWEVAREKITMSRELGQGSFGMVYEG----VAKGVVKDEPETRVAIKTVNEAASMRERI 66
Query: 134 EWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQ-------- 185
E+L E + + + + ++V+L+G +G+ L++ E M +G L+++L P+
Sbjct: 67 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 126
Query: 186 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 245
P S + +++A A G+ +L+ ++ ++RD A N ++ +F K+ DFG+ +
Sbjct: 127 PPSLSKMIQMAGEIADGMAYLN--ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 184
Query: 246 DRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSL 305
D + + + +PE + G TT SDV+SFGVVL E+ +L
Sbjct: 185 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------ATL 229
Query: 306 VDWAKPY--LSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL-A 362
+ +PY LS+++ L +M+ L + P L C PK+RP E++ +
Sbjct: 230 AE--QPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 286
Query: 363 ILERLEAPKNSAKLSQSEPHR 383
I E +E SE ++
Sbjct: 287 IKEEMEPGFREVSFYYSEENK 307
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 111/208 (53%), Gaps = 22/208 (10%)
Query: 89 LLGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKL-KPEGFQGHKEWLTEVNYLGQLH 146
+LG G FG VYKG W+ P + VA+K L + G + + E++ E + +
Sbjct: 22 VLGSGAFGTVYKGIWV------PEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMD 75
Query: 147 HPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRR----GPQPL-SWAVRMKVAIGAAK 201
HP+LV+L+G CL +L V + MP G L ++ G Q L +W V++ AK
Sbjct: 76 HPHLVRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQI------AK 128
Query: 202 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 261
G+ +L E ++++RD A N+L+ + + K++DFGLA+ ++ + + +
Sbjct: 129 GMMYLE--ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWM 186
Query: 262 APEYVATGRLTTKSDVYSFGVVLLELLS 289
A E + + T +SDV+S+GV + EL++
Sbjct: 187 ALECIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 144/307 (46%), Gaps = 44/307 (14%)
Query: 84 FRPDSLLGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLKPEGF-QGHKEWLTEVNY 141
R +LG G FG VYKG WI P + VA+K L+ + +KE L E
Sbjct: 19 LRKVKVLGSGAFGTVYKGIWI------PDGENVKIPVAIKVLRENTSPKANKEILDEAYV 72
Query: 142 LGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLF----RRGPQPL-SWAVRMKVA 196
+ + P + +L+G CL +L V + MP G L +H+ R G Q L +W +++
Sbjct: 73 MAGVGSPYVSRLLGICLTSTVQL-VTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQI--- 128
Query: 197 IGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMG 256
AKG+++L D ++++RD A N+L+ + + K++DFGLA+ + + +
Sbjct: 129 ---AKGMSYLEDV--RLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKV 183
Query: 257 THGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-D 315
+ A E + R T +SDV+S+GV + EL++ AKPY
Sbjct: 184 PIKWMALESILRRRFTHQSDVWSYGVTVWELMTFG-----------------AKPYDGIP 226
Query: 316 KRKLFRIMDTKLGGQYPQKAAHT--AATLALQCLNNEPKLRPRMSEVLAILERLEAPKNS 373
R++ +++ G + PQ T + ++C + + RPR E+++ R+
Sbjct: 227 AREIPDLLEK--GERLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVSEFSRMARDPQR 284
Query: 374 AKLSQSE 380
+ Q+E
Sbjct: 285 FVVIQNE 291
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 110/212 (51%), Gaps = 13/212 (6%)
Query: 82 RNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNY 141
R+ + S LG+G FG V D P +G +VAVK+L+ G +++ E+
Sbjct: 10 RHLKYISQLGKGNFGSVELCRYD-----PLGDNTGALVAVKQLQHSGPDQQRDFQREIQI 64
Query: 142 LGQLHHPNLVKLIG--YCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGA 199
L LH +VK G Y ++ LV E++P G L + L R + L + + +
Sbjct: 65 LKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR-LDASRLLLYSSQI 123
Query: 200 AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH- 258
KG+ +L + ++RD A NIL+++E + K++DFGLAK P D+ + + G
Sbjct: 124 CKGMEYL--GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPL-DKDYYVVREPGQSP 180
Query: 259 -GYAAPEYVATGRLTTKSDVYSFGVVLLELLS 289
+ APE ++ + +SDV+SFGVVL EL +
Sbjct: 181 IFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 112/240 (46%), Gaps = 25/240 (10%)
Query: 59 SEGEILSSSNLKAFTFNELKTATRNFRPDSL------LGEGGFGFVYKGWIDQHSLSPAK 112
S G L + NL + + + TR+ P+ LG+G FG VYK
Sbjct: 8 SSGVDLGTENLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKA---------QN 58
Query: 113 PGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPK 172
+ ++ A K + + + ++++ E++ L HPN+VKL+ N ++ EF
Sbjct: 59 KETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 118
Query: 173 GSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAK 232
G+++ + +PL+ + V L +LHD +++I+RD KA NIL + + K
Sbjct: 119 GAVDAVMLEL-ERPLTESQIQVVCKQTLDALNYLHD--NKIIHRDLKAGNILFTLDGDIK 175
Query: 233 LSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGR-----LTTKSDVYSFGVVLLEL 287
L+DFG++ + S +GT + APE V K+DV+S G+ L+E+
Sbjct: 176 LADFGVSAKNTRXIQRRDS--FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 147/321 (45%), Gaps = 36/321 (11%)
Query: 75 NELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KPEGFQGHK 133
+E + A LG+G FG VY+G + K VA+K + + +
Sbjct: 40 DEWEVAREKITMSRELGQGSFGMVYEG----VAKGVVKDEPETRVAIKTVNEAASMRERI 95
Query: 134 EWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQ-------- 185
E+L E + + + + ++V+L+G +G+ L++ E M +G L+++L P+
Sbjct: 96 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 155
Query: 186 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 245
P S + +++A A G+ +L+ ++ ++RD A N ++ +F K+ DFG+ +
Sbjct: 156 PPSLSKMIQMAGEIADGMAYLN--ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 213
Query: 246 DRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSL 305
D + + + +PE + G TT SDV+SFGVVL E+ +L
Sbjct: 214 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------ATL 258
Query: 306 VDWAKPY--LSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL-A 362
+ +PY LS+++ L +M+ L + P L C PK+RP E++ +
Sbjct: 259 AE--QPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 315
Query: 363 ILERLEAPKNSAKLSQSEPHR 383
I E +E SE ++
Sbjct: 316 IKEEMEPGFREVSFYYSEENK 336
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 133/292 (45%), Gaps = 45/292 (15%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEG-FQGHKEWLTEVNYLGQLHHP 148
LG+G FG VY+G ++ K + VAVK + + E+L E + +
Sbjct: 25 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 149 NLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQ--------PLSWAVRMKVAIGAA 200
++V+L+G +G+ L+V E M G L+++L P+ P + +++A A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 201 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG- 259
G+ +L+ + ++RD A N ++ +F K+ DFG+ T D + G G
Sbjct: 141 DGMAYLN--AKKFVHRDLAARNCMVAHDFTVKIGDFGM-----TRDIYETAYYRKGGKGL 193
Query: 260 ----YAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPY--L 313
+ APE + G TT SD++SFGVVL E+ SL + +PY L
Sbjct: 194 LPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI---------------TSLAE--QPYQGL 236
Query: 314 SDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILE 365
S+++ L +MD Q P L C PK+RP E++ +L+
Sbjct: 237 SNEQVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 143/333 (42%), Gaps = 41/333 (12%)
Query: 70 KAFTFNELKTATR-NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPE- 127
K + ++LK R N LG G FG VY+G Q S P P S + VAVK L PE
Sbjct: 18 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEG---QVSGMPNDP-SPLQVAVKTL-PEV 72
Query: 128 -GFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQP 186
Q ++L E + +L+H N+V+ IG L+ R ++ E M G L++ L P+P
Sbjct: 73 CSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP 132
Query: 187 -----LSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAE---FNAKLSDFGL 238
L+ + VA A G +L E+ I+RD A N LL AK+ DFG+
Sbjct: 133 SQPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 190
Query: 239 AKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTK 298
A+ M + PE G T+K+D +SFGV+L E+ S
Sbjct: 191 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--------- 241
Query: 299 VGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQY--PQKAAHTAATLALQCLNNEPKLRPR 356
+G PY S + T GG+ P+ + QC ++P+ RP
Sbjct: 242 LGY--------MPYPSKSNQEVLEFVTS-GGRMDPPKNCPGPVYRIMTQCWQHQPEDRPN 292
Query: 357 MSEVLAILERLEAPKNSAKLSQSEPHRQTGPVT 389
+ ILER+E + + + GP+
Sbjct: 293 FA---IILERIEYCTQDPDVINTALPIEYGPLV 322
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 110/212 (51%), Gaps = 13/212 (6%)
Query: 82 RNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNY 141
R+ + S LG+G FG V D P +G +VAVK+L+ G +++ E+
Sbjct: 11 RHLKYISQLGKGNFGSVELCRYD-----PLGDNTGALVAVKQLQHSGPDQQRDFQREIQI 65
Query: 142 LGQLHHPNLVKLIG--YCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGA 199
L LH +VK G Y ++ LV E++P G L + L R + L + + +
Sbjct: 66 LKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR-LDASRLLLYSSQI 124
Query: 200 AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH- 258
KG+ +L + ++RD A NIL+++E + K++DFGLAK P D+ + + G
Sbjct: 125 CKGMEYL--GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPL-DKDYYVVREPGQSP 181
Query: 259 -GYAAPEYVATGRLTTKSDVYSFGVVLLELLS 289
+ APE ++ + +SDV+SFGVVL EL +
Sbjct: 182 IFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 134/313 (42%), Gaps = 57/313 (18%)
Query: 83 NFRPDSLLGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNY 141
+ R + LG+G FG V+ G W VA+K LKP G + +L E
Sbjct: 268 SLRLEVKLGQGCFGEVWMGTW-----------NGTTRVAIKTLKP-GTMSPEAFLQEAQV 315
Query: 142 LGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHL------FRRGPQPLSWAVRMKV 195
+ +L H LV+L E E +V E+M KGSL + L + R PQ + A ++
Sbjct: 316 MKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIAS 374
Query: 196 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ-V 254
+ + + ++H RD +A+NIL+ K++DFGLA+ D + + Q
Sbjct: 375 GMAYVERMNYVH--------RDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGA 424
Query: 255 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 314
+ APE GR T KSDV+SFG++L EL + K +V PY
Sbjct: 425 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT------KGRV-----------PYPG 467
Query: 315 -DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEAPKNS 373
R++ ++ P + + L QC EP+ RP + A LE
Sbjct: 468 MVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY------ 521
Query: 374 AKLSQSEPHRQTG 386
+ +EP Q G
Sbjct: 522 --FTSTEPQXQPG 532
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 102/202 (50%), Gaps = 19/202 (9%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
LG G G V+ G+ + H+ VAVK LK +G +L E N + QL H
Sbjct: 21 LGAGQAGEVWMGYYNGHT----------KVAVKSLK-QGSMSPDAFLAEANLMKQLQHQR 69
Query: 150 LVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVR--MKVAIGAAKGLTFLH 207
LV+L + E ++ E+M GSL + F + P + + + +A A+G+ F+
Sbjct: 70 LVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 208 DAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVA 267
E I+RD +A+NIL+ + K++DFGLA+ + T + APE +
Sbjct: 127 --ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIK-WTAPEAIN 183
Query: 268 TGRLTTKSDVYSFGVVLLELLS 289
G T KSDV+SFG++L E+++
Sbjct: 184 YGTFTIKSDVWSFGILLTEIVT 205
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 110/212 (51%), Gaps = 13/212 (6%)
Query: 82 RNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNY 141
R+ + S LG+G FG V D P +G +VAVK+L+ G +++ E+
Sbjct: 23 RHLKYISQLGKGNFGSVELCRYD-----PLGDNTGALVAVKQLQHSGPDQQRDFQREIQI 77
Query: 142 LGQLHHPNLVKLIG--YCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGA 199
L LH +VK G Y ++ LV E++P G L + L R + L + + +
Sbjct: 78 LKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR-LDASRLLLYSSQI 136
Query: 200 AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH- 258
KG+ +L + ++RD A NIL+++E + K++DFGLAK P D+ + + G
Sbjct: 137 CKGMEYL--GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPL-DKDYYVVREPGQSP 193
Query: 259 -GYAAPEYVATGRLTTKSDVYSFGVVLLELLS 289
+ APE ++ + +SDV+SFGVVL EL +
Sbjct: 194 IFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 147/325 (45%), Gaps = 36/325 (11%)
Query: 75 NELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KPEGFQGHK 133
+E + A LG+G FG VY+G + K VA+K + + +
Sbjct: 18 DEWEVAREKITMSRELGQGSFGMVYEG----VAKGVVKDEPETRVAIKTVNEAASMRERI 73
Query: 134 EWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQ-------- 185
E+L E + + + + ++V+L+G +G+ L++ E M +G L+++L P
Sbjct: 74 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLA 133
Query: 186 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 245
P S + +++A A G+ +L+ ++ ++RD A N ++ +F K+ DFG+ +
Sbjct: 134 PPSLSKMIQMAGEIADGMAYLN--ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 191
Query: 246 DRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSL 305
D + + + +PE + G TT SDV+SFGVVL E+ +L
Sbjct: 192 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------ATL 236
Query: 306 VDWAKPY--LSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL-A 362
+ +PY LS+++ L +M+ L + P L C PK+RP E++ +
Sbjct: 237 AE--QPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 293
Query: 363 ILERLEAPKNSAKLSQSEPHRQTGP 387
I E +E SE ++ P
Sbjct: 294 IKEEMEPGFREVSFYYSEENKLPEP 318
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 135/312 (43%), Gaps = 40/312 (12%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGF--QGHKEWLTEVNYLGQLHH 147
LG G FG VY+G Q S P P S + VAVK L PE + Q ++L E + + +H
Sbjct: 53 LGHGAFGEVYEG---QVSGMPNDP-SPLQVAVKTL-PEVYSEQDELDFLMEALIISKFNH 107
Query: 148 PNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQP-----LSWAVRMKVAIGAAKG 202
N+V+ IG L+ R ++ E M G L++ L P+P L+ + VA A G
Sbjct: 108 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 167
Query: 203 LTFLHDAESQVIYRDFKASNILLDAE---FNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 259
+L E+ I+RD A N LL AK+ DFG+A+ M
Sbjct: 168 CQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 225
Query: 260 YAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKL 319
+ PE G T+K+D +SFGV+L E+ S +G PY S +
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS---------LGY--------MPYPSKSNQE 268
Query: 320 FRIMDTKLGGQY--PQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEAPKNSAKLS 377
T GG+ P+ + QC ++P+ RP + ILER+E +
Sbjct: 269 VLEFVTS-GGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFA---IILERIEYCTQDPDVI 324
Query: 378 QSEPHRQTGPVT 389
+ + GP+
Sbjct: 325 NTALPIEYGPLV 336
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 102/212 (48%), Gaps = 14/212 (6%)
Query: 82 RNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGF---QGHKEWLTE 138
++ R LG+G FG V +G D A G + VAVK LKP+ + +++ E
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWD------APSGKTVSVAVKCLKPDVLSQPEAMDDFIRE 61
Query: 139 VNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIG 198
VN + L H NL++L G L ++ V E P GSL + L R+ + A+
Sbjct: 62 VNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRL-RKHQGHFLLGTLSRYAVQ 119
Query: 199 AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT- 257
A+G+ +L + I+RD A N+LL K+ DFGL +A P D +V +
Sbjct: 120 VAEGMGYLE--SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVP 177
Query: 258 HGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 289
+ APE + T + SD + FGV L E+ +
Sbjct: 178 FAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 99/204 (48%), Gaps = 14/204 (6%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGF---QGHKEWLTEVNYLGQLH 146
LG+G FG V +G D A G + VAVK LKP+ + +++ EVN + L
Sbjct: 20 LGDGSFGVVRRGEWD------APSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 73
Query: 147 HPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFL 206
H NL++L G L ++ V E P GSL + L R+ + A+ A+G+ +L
Sbjct: 74 HRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRL-RKHQGHFLLGTLSRYAVQVAEGMGYL 131
Query: 207 HDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT-HGYAAPEY 265
+ I+RD A N+LL K+ DFGL +A P D +V + + APE
Sbjct: 132 E--SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPES 189
Query: 266 VATGRLTTKSDVYSFGVVLLELLS 289
+ T + SD + FGV L E+ +
Sbjct: 190 LKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 132/312 (42%), Gaps = 55/312 (17%)
Query: 83 NFRPDSLLGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNY 141
+ R + LG+G FG V+ G W VA+K LKP G + +L E
Sbjct: 9 SLRLEVKLGQGCFGEVWMGTW-----------NGTTRVAIKTLKP-GTMSPEAFLQEAQV 56
Query: 142 LGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHL------FRRGPQPLSWAVRMKV 195
+ +L H LV+L E E +V E+M KGSL + L + R PQ + A ++
Sbjct: 57 MKKLRHEKLVQLYAVVSE-EPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIAS 115
Query: 196 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVM 255
+ + + ++H RD +A+NIL+ K++DFGLA+ + T
Sbjct: 116 GMAYVERMNYVH--------RDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKF 167
Query: 256 GTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS- 314
+ APE GR T KSDV+SFG++L EL + K +V PY
Sbjct: 168 PIK-WTAPEAALYGRFTIKSDVWSFGILLTELTT------KGRV-----------PYPGM 209
Query: 315 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEAPKNSA 374
R++ ++ P + + L QC EP+ RP + A LE
Sbjct: 210 VNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY------- 262
Query: 375 KLSQSEPHRQTG 386
+ +EP Q G
Sbjct: 263 -FTSTEPQYQPG 273
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 102/212 (48%), Gaps = 14/212 (6%)
Query: 82 RNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGF---QGHKEWLTE 138
++ R LG+G FG V +G D A G + VAVK LKP+ + +++ E
Sbjct: 12 KDLRLLEKLGDGSFGVVRRGEWD------APSGKTVSVAVKCLKPDVLSQPEAMDDFIRE 65
Query: 139 VNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIG 198
VN + L H NL++L G L ++ V E P GSL + L R+ + A+
Sbjct: 66 VNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRL-RKHQGHFLLGTLSRYAVQ 123
Query: 199 AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT- 257
A+G+ +L + I+RD A N+LL K+ DFGL +A P D +V +
Sbjct: 124 VAEGMGYLE--SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVP 181
Query: 258 HGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 289
+ APE + T + SD + FGV L E+ +
Sbjct: 182 FAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 110/240 (45%), Gaps = 25/240 (10%)
Query: 59 SEGEILSSSNLKAFTFNELKTATRNFRPDSL------LGEGGFGFVYKGWIDQHSLSPAK 112
S G L + NL + + + TR+ P+ LG+G FG VYK
Sbjct: 8 SSGVDLGTENLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKA---------QN 58
Query: 113 PGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPK 172
+ ++ A K + + + ++++ E++ L HPN+VKL+ N ++ EF
Sbjct: 59 KETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 118
Query: 173 GSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAK 232
G+++ + +PL+ + V L +LHD +++I+RD KA NIL + + K
Sbjct: 119 GAVDAVMLEL-ERPLTESQIQVVCKQTLDALNYLHD--NKIIHRDLKAGNILFTLDGDIK 175
Query: 233 LSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGR-----LTTKSDVYSFGVVLLEL 287
L+DFG+ + +GT + APE V K+DV+S G+ L+E+
Sbjct: 176 LADFGV--SAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 146/321 (45%), Gaps = 36/321 (11%)
Query: 75 NELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KPEGFQGHK 133
+E + A LG+G FG VY+G + K VA+K + + +
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEG----VAKGVVKDEPETRVAIKTVNEAASMRERI 60
Query: 134 EWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQ-------- 185
E+L E + + + + ++V+L+G +G+ L++ E M +G L+++L P+
Sbjct: 61 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 120
Query: 186 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 245
P S + +++A A G+ +L+ ++ ++RD A N + +F K+ DFG+ +
Sbjct: 121 PPSLSKMIQMAGEIADGMAYLN--ANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYET 178
Query: 246 DRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSL 305
D + + + +PE + G TT SDV+SFGVVL E+ +L
Sbjct: 179 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------ATL 223
Query: 306 VDWAKPY--LSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL-A 362
+ +PY LS+++ L +M+ L + P L C PK+RP E++ +
Sbjct: 224 AE--QPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLLELMRMCWQYNPKMRPSFLEIISS 280
Query: 363 ILERLEAPKNSAKLSQSEPHR 383
I E +E SE ++
Sbjct: 281 IKEEMEPGFREVSFYYSEENK 301
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 102/212 (48%), Gaps = 14/212 (6%)
Query: 82 RNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGF---QGHKEWLTE 138
++ R LG+G FG V +G D A G + VAVK LKP+ + +++ E
Sbjct: 18 KDLRLLEKLGDGSFGVVRRGEWD------APSGKTVSVAVKCLKPDVLSQPEAMDDFIRE 71
Query: 139 VNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIG 198
VN + L H NL++L G L ++ V E P GSL + L R+ + A+
Sbjct: 72 VNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRL-RKHQGHFLLGTLSRYAVQ 129
Query: 199 AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT- 257
A+G+ +L + I+RD A N+LL K+ DFGL +A P D +V +
Sbjct: 130 VAEGMGYLE--SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVP 187
Query: 258 HGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 289
+ APE + T + SD + FGV L E+ +
Sbjct: 188 FAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 146/321 (45%), Gaps = 36/321 (11%)
Query: 75 NELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KPEGFQGHK 133
+E + A LG+G FG VY+G + K VA+K + + +
Sbjct: 8 DEWEVAREKITMSRELGQGSFGMVYEG----VAKGVVKDEPETRVAIKTVNEAASMRERI 63
Query: 134 EWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQ-------- 185
E+L E + + + + ++V+L+G +G+ L++ E M +G L+++L P
Sbjct: 64 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLA 123
Query: 186 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 245
P S + +++A A G+ +L+ ++ ++RD A N ++ +F K+ DFG+ +
Sbjct: 124 PPSLSKMIQMAGEIADGMAYLN--ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 181
Query: 246 DRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSL 305
D + + + +PE + G TT SDV+SFGVVL E+ +L
Sbjct: 182 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------ATL 226
Query: 306 VDWAKPY--LSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL-A 362
+ +PY LS+++ L +M+ L + P L C PK+RP E++ +
Sbjct: 227 AE--QPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 283
Query: 363 ILERLEAPKNSAKLSQSEPHR 383
I E +E SE ++
Sbjct: 284 IKEEMEPGFREVSFYYSEENK 304
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 102/212 (48%), Gaps = 14/212 (6%)
Query: 82 RNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGF---QGHKEWLTE 138
++ R LG+G FG V +G D A G + VAVK LKP+ + +++ E
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWD------APSGKTVSVAVKCLKPDVLSQPEAMDDFIRE 61
Query: 139 VNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIG 198
VN + L H NL++L G L ++ V E P GSL + L R+ + A+
Sbjct: 62 VNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRL-RKHQGHFLLGTLSRYAVQ 119
Query: 199 AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT- 257
A+G+ +L + I+RD A N+LL K+ DFGL +A P D +V +
Sbjct: 120 VAEGMGYLE--SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVP 177
Query: 258 HGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 289
+ APE + T + SD + FGV L E+ +
Sbjct: 178 FAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 143/333 (42%), Gaps = 41/333 (12%)
Query: 70 KAFTFNELKTATR-NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPE- 127
K + ++LK R N LG G FG VY+G Q S P P S + VAVK L PE
Sbjct: 32 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEG---QVSGMPNDP-SPLQVAVKTL-PEV 86
Query: 128 -GFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQP 186
Q ++L E + +L+H N+V+ IG L+ R ++ E M G L++ L P+P
Sbjct: 87 CSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP 146
Query: 187 -----LSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAE---FNAKLSDFGL 238
L+ + VA A G +L E+ I+RD A N LL AK+ DFG+
Sbjct: 147 SQPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 204
Query: 239 AKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTK 298
A+ M + PE G T+K+D +SFGV+L E+ S
Sbjct: 205 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--------- 255
Query: 299 VGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQY--PQKAAHTAATLALQCLNNEPKLRPR 356
+G PY S + T GG+ P+ + QC ++P+ RP
Sbjct: 256 LGY--------MPYPSKSNQEVLEFVTS-GGRMDPPKNCPGPVYRIMTQCWQHQPEDRPN 306
Query: 357 MSEVLAILERLEAPKNSAKLSQSEPHRQTGPVT 389
+ ILER+E + + + GP+
Sbjct: 307 FA---IILERIEYCTQDPDVINTALPIEYGPLV 336
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 134/313 (42%), Gaps = 57/313 (18%)
Query: 83 NFRPDSLLGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNY 141
+ R + LG+G FG V+ G W VA+K LKP G + +L E
Sbjct: 12 SLRLEVKLGQGCFGEVWMGTW-----------NGTTRVAIKTLKP-GTMSPEAFLQEAQV 59
Query: 142 LGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHL------FRRGPQPLSWAVRMKV 195
+ +L H LV+L E E +V E+M KGSL + L + R PQ + A ++
Sbjct: 60 MKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIAS 118
Query: 196 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ-V 254
+ + + ++H RD +A+NIL+ K++DFGLA+ D + + Q
Sbjct: 119 GMAYVERMNYVH--------RDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGA 168
Query: 255 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 314
+ APE GR T KSDV+SFG++L EL + K +V PY
Sbjct: 169 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT------KGRV-----------PYPG 211
Query: 315 -DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEAPKNS 373
R++ ++ P + + L QC EP+ RP + A LE
Sbjct: 212 MVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY------ 265
Query: 374 AKLSQSEPHRQTG 386
+ +EP Q G
Sbjct: 266 --FTSTEPQYQPG 276
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 102/216 (47%), Gaps = 22/216 (10%)
Query: 82 RNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGF---QGHKEWLTE 138
++ R LG+G FG V +G D A G + VAVK LKP+ + +++ E
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWD------APSGKTVSVAVKCLKPDVLSQPEAMDDFIRE 61
Query: 139 VNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIG 198
VN + L H NL++L G L ++ V E P GSL + L R+ + A+
Sbjct: 62 VNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRL-RKHQGHFLLGTLSRYAVQ 119
Query: 199 AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH 258
A+G+ +L + I+RD A N+LL K+ DFGL +A P D VM H
Sbjct: 120 VAEGMGYLE--SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND----DHXVMQEH 173
Query: 259 -----GYAAPEYVATGRLTTKSDVYSFGVVLLELLS 289
+ APE + T + SD + FGV L E+ +
Sbjct: 174 RKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 134/289 (46%), Gaps = 39/289 (13%)
Query: 87 DSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGF--QGHKEWLTEVNYLGQ 144
+ ++G G FG V G + P K + VA+K LK G+ + +++L E + +GQ
Sbjct: 27 ERVIGAGEFGEVCSGRLKL----PGK--RELPVAIKTLKV-GYTEKQRRDFLGEASIMGQ 79
Query: 145 LHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI--GAAKG 202
HPN++ L G + + ++V E+M GSL+ L + Q + V V + G + G
Sbjct: 80 FDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQ---FTVIQLVGMLRGISAG 136
Query: 203 LTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH---G 259
+ +L D ++RD A NIL+++ K+SDFGL++ D + G
Sbjct: 137 MKYLSDM--GYVHRDLAARNILINSNLVCKVSDFGLSRV--LEDDPEAAYTTRGGKIPIR 192
Query: 260 YAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRK 318
+ APE +A + T+ SDV+S+G+V+ E++S +PY +
Sbjct: 193 WTAPEAIAFRKFTSASDVWSYGIVMWEVVSYG-----------------ERPYWEMTNQD 235
Query: 319 LFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 367
+ + ++ P L L C E RP+ E++ +L++L
Sbjct: 236 VIKAVEEGYRLPSPMDCPAALYQLMLDCWQKERNSRPKFDEIVNMLDKL 284
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 133/314 (42%), Gaps = 59/314 (18%)
Query: 83 NFRPDSLLGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNY 141
+ R + LG+G FG V+ G W VA+K LKP G + +L E
Sbjct: 185 SLRLEVKLGQGCFGEVWMGTW-----------NGTTRVAIKTLKP-GTMSPEAFLQEAQV 232
Query: 142 LGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHL------FRRGPQPLSWAVRMKV 195
+ +L H LV+L E E +V E+M KGSL + L + R PQ + A ++
Sbjct: 233 MKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIAS 291
Query: 196 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ-V 254
+ + + ++H RD +A+NIL+ K++DFGLA+ D + + Q
Sbjct: 292 GMAYVERMNYVH--------RDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGA 341
Query: 255 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS-GRCAVDKTKVGIEQSLVDWAKPYL 313
+ APE GR T KSDV+SFG++L EL + GR PY
Sbjct: 342 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV------------------PYP 383
Query: 314 S-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEAPKN 372
R++ ++ P + + L QC EP+ RP + A LE
Sbjct: 384 GMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY----- 438
Query: 373 SAKLSQSEPHRQTG 386
+ +EP Q G
Sbjct: 439 ---FTSTEPQXQPG 449
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 102/216 (47%), Gaps = 22/216 (10%)
Query: 82 RNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGF---QGHKEWLTE 138
++ R LG+G FG V +G D A G + VAVK LKP+ + +++ E
Sbjct: 18 KDLRLLEKLGDGSFGVVRRGEWD------APSGKTVSVAVKCLKPDVLSQPEAMDDFIRE 71
Query: 139 VNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIG 198
VN + L H NL++L G L ++ V E P GSL + L R+ + A+
Sbjct: 72 VNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRL-RKHQGHFLLGTLSRYAVQ 129
Query: 199 AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH 258
A+G+ +L + I+RD A N+LL K+ DFGL +A P D VM H
Sbjct: 130 VAEGMGYLE--SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND----DHXVMQEH 183
Query: 259 -----GYAAPEYVATGRLTTKSDVYSFGVVLLELLS 289
+ APE + T + SD + FGV L E+ +
Sbjct: 184 RKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 106/211 (50%), Gaps = 11/211 (5%)
Query: 82 RNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNY 141
R+ + S LG+G FG V D P +G +VAVK+L+ G +++ E+
Sbjct: 7 RHLKYISQLGKGNFGSVELCRYD-----PLGDNTGALVAVKQLQHSGPDQQRDFQREIQI 61
Query: 142 LGQLHHPNLVKLIGYCL-EGENRL-LVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGA 199
L LH +VK G G L LV E++P G L + L R + L + + +
Sbjct: 62 LKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRAR-LDASRLLLYSSQI 120
Query: 200 AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG-DRTHVSTQVMGTH 258
KG+ +L + ++RD A NIL+++E + K++DFGLAK P D V
Sbjct: 121 CKGMEYL--GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPI 178
Query: 259 GYAAPEYVATGRLTTKSDVYSFGVVLLELLS 289
+ APE ++ + +SDV+SFGVVL EL +
Sbjct: 179 FWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 142/333 (42%), Gaps = 41/333 (12%)
Query: 70 KAFTFNELKTATR-NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEG 128
K + ++LK R N LG G FG VY+G Q S P P S + VAVK L PE
Sbjct: 17 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEG---QVSGMPNDP-SPLQVAVKTL-PEV 71
Query: 129 F--QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQP 186
Q ++L E + + +H N+V+ IG L+ R ++ E M G L++ L P+P
Sbjct: 72 CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRP 131
Query: 187 -----LSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAE---FNAKLSDFGL 238
L+ + VA A G +L E+ I+RD A N LL AK+ DFG+
Sbjct: 132 SQPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 189
Query: 239 AKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTK 298
A+ M + PE G T+K+D +SFGV+L E+ S
Sbjct: 190 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--------- 240
Query: 299 VGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQY--PQKAAHTAATLALQCLNNEPKLRPR 356
+G PY S + T GG+ P+ + QC ++P+ RP
Sbjct: 241 LGY--------MPYPSKSNQEVLEFVTS-GGRMDPPKNCPGPVYRIMTQCWQHQPEDRPN 291
Query: 357 MSEVLAILERLEAPKNSAKLSQSEPHRQTGPVT 389
+ ILER+E + + + GP+
Sbjct: 292 FA---IILERIEYCTQDPDVINTALPIEYGPLV 321
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 136/312 (43%), Gaps = 41/312 (13%)
Query: 70 KAFTFNELKTATR-NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPE- 127
K + ++LK R N LG G FG VY+G Q S P P S + VAVK L PE
Sbjct: 44 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEG---QVSGMPNDP-SPLQVAVKTL-PEV 98
Query: 128 -GFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQP 186
Q ++L E + + +H N+V+ IG L+ R ++ E M G L++ L P+P
Sbjct: 99 CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP 158
Query: 187 -----LSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAE---FNAKLSDFGL 238
L+ + VA A G +L E+ I+RD A N LL AK+ DFG+
Sbjct: 159 SQPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 216
Query: 239 AKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTK 298
A+ M + PE G T+K+D +SFGV+L E+ S
Sbjct: 217 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--------- 267
Query: 299 VGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQY--PQKAAHTAATLALQCLNNEPKLRPR 356
+G PY S + T GG+ P+ + QC ++P+ RP
Sbjct: 268 LGY--------MPYPSKSNQEVLEFVTS-GGRMDPPKNCPGPVYRIMTQCWQHQPEDRPN 318
Query: 357 MSEVLAILERLE 368
+ ILER+E
Sbjct: 319 FA---IILERIE 327
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 133/314 (42%), Gaps = 59/314 (18%)
Query: 83 NFRPDSLLGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNY 141
+ R + LG+G FG V+ G W VA+K LKP G + +L E
Sbjct: 185 SLRLEVKLGQGCFGEVWMGTW-----------NGTTRVAIKTLKP-GTMSPEAFLQEAQV 232
Query: 142 LGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHL------FRRGPQPLSWAVRMKV 195
+ +L H LV+L E E +V E+M KGSL + L + R PQ + A ++
Sbjct: 233 MKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIAS 291
Query: 196 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ-V 254
+ + + ++H RD +A+NIL+ K++DFGLA+ D + + Q
Sbjct: 292 GMAYVERMNYVH--------RDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGA 341
Query: 255 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS-GRCAVDKTKVGIEQSLVDWAKPYL 313
+ APE GR T KSDV+SFG++L EL + GR PY
Sbjct: 342 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV------------------PYP 383
Query: 314 S-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEAPKN 372
R++ ++ P + + L QC EP+ RP + A LE
Sbjct: 384 GMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY----- 438
Query: 373 SAKLSQSEPHRQTG 386
+ +EP Q G
Sbjct: 439 ---FTSTEPQYQPG 449
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 134/312 (42%), Gaps = 40/312 (12%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPE--GFQGHKEWLTEVNYLGQLHH 147
LG G FG VY+G Q S P P S + VAVK L PE Q ++L E + + +H
Sbjct: 39 LGHGAFGEVYEG---QVSGMPNDP-SPLQVAVKTL-PEVCSEQDELDFLMEALIISKFNH 93
Query: 148 PNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQP-----LSWAVRMKVAIGAAKG 202
N+V+ IG L+ R ++ E M G L++ L P+P L+ + VA A G
Sbjct: 94 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 153
Query: 203 LTFLHDAESQVIYRDFKASNILLDAE---FNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 259
+L E+ I+RD A N LL AK+ DFG+A+ M
Sbjct: 154 CQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 211
Query: 260 YAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKL 319
+ PE G T+K+D +SFGV+L E+ S +G PY S +
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS---------LGY--------MPYPSKSNQE 254
Query: 320 FRIMDTKLGGQY--PQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEAPKNSAKLS 377
T GG+ P+ + QC ++P+ RP + ILER+E +
Sbjct: 255 VLEFVTS-GGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFA---IILERIEYCTQDPDVI 310
Query: 378 QSEPHRQTGPVT 389
+ + GP+
Sbjct: 311 NTALPIEYGPLV 322
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 142/333 (42%), Gaps = 41/333 (12%)
Query: 70 KAFTFNELKTATR-NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPE- 127
K + ++LK R N LG G FG VY+G Q S P P S + VAVK L PE
Sbjct: 34 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEG---QVSGMPNDP-SPLQVAVKTL-PEV 88
Query: 128 -GFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQP 186
Q ++L E + + +H N+V+ IG L+ R ++ E M G L++ L P+P
Sbjct: 89 CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP 148
Query: 187 -----LSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAE---FNAKLSDFGL 238
L+ + VA A G +L E+ I+RD A N LL AK+ DFG+
Sbjct: 149 SQPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 206
Query: 239 AKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTK 298
A+ M + PE G T+K+D +SFGV+L E+ S
Sbjct: 207 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--------- 257
Query: 299 VGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQY--PQKAAHTAATLALQCLNNEPKLRPR 356
+G PY S + T GG+ P+ + QC ++P+ RP
Sbjct: 258 LGY--------MPYPSKSNQEVLEFVTS-GGRMDPPKNCPGPVYRIMTQCWQHQPEDRPN 308
Query: 357 MSEVLAILERLEAPKNSAKLSQSEPHRQTGPVT 389
+ ILER+E + + + GP+
Sbjct: 309 FA---IILERIEYCTQDPDVINTALPIEYGPLV 338
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 134/312 (42%), Gaps = 40/312 (12%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPE--GFQGHKEWLTEVNYLGQLHH 147
LG G FG VY+G Q S P P S + VAVK L PE Q ++L E + + +H
Sbjct: 45 LGHGAFGEVYEG---QVSGMPNDP-SPLQVAVKTL-PEVCSEQDELDFLMEALIISKFNH 99
Query: 148 PNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQP-----LSWAVRMKVAIGAAKG 202
N+V+ IG L+ R ++ E M G L++ L P+P L+ + VA A G
Sbjct: 100 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 159
Query: 203 LTFLHDAESQVIYRDFKASNILLDAE---FNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 259
+L E+ I+RD A N LL AK+ DFG+A+ M
Sbjct: 160 CQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 217
Query: 260 YAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKL 319
+ PE G T+K+D +SFGV+L E+ S +G PY S +
Sbjct: 218 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS---------LGY--------MPYPSKSNQE 260
Query: 320 FRIMDTKLGGQY--PQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEAPKNSAKLS 377
T GG+ P+ + QC ++P+ RP + ILER+E +
Sbjct: 261 VLEFVTS-GGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFA---IILERIEYCTQDPDVI 316
Query: 378 QSEPHRQTGPVT 389
+ + GP+
Sbjct: 317 NTALPIEYGPLV 328
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 142/333 (42%), Gaps = 41/333 (12%)
Query: 70 KAFTFNELKTATR-NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEG 128
K + ++LK R N LG G FG VY+G Q S P P S + VAVK L PE
Sbjct: 17 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEG---QVSGMPNDP-SPLQVAVKTL-PEV 71
Query: 129 F--QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQP 186
Q ++L E + + +H N+V+ IG L+ R ++ E M G L++ L P+P
Sbjct: 72 CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP 131
Query: 187 -----LSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAE---FNAKLSDFGL 238
L+ + VA A G +L E+ I+RD A N LL AK+ DFG+
Sbjct: 132 SQPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 189
Query: 239 AKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTK 298
A+ M + PE G T+K+D +SFGV+L E+ S
Sbjct: 190 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--------- 240
Query: 299 VGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQY--PQKAAHTAATLALQCLNNEPKLRPR 356
+G PY S + T GG+ P+ + QC ++P+ RP
Sbjct: 241 LGY--------MPYPSKSNQEVLEFVTS-GGRMDPPKNCPGPVYRIMTQCWQHQPEDRPN 291
Query: 357 MSEVLAILERLEAPKNSAKLSQSEPHRQTGPVT 389
+ ILER+E + + + GP+
Sbjct: 292 FA---IILERIEYCTQDPDVINTALPIEYGPLV 321
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 134/313 (42%), Gaps = 57/313 (18%)
Query: 83 NFRPDSLLGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNY 141
+ R + LG+G FG V+ G W VA+K LKP G + +L E
Sbjct: 185 SLRLEVKLGQGCFGEVWMGTW-----------NGTTRVAIKTLKP-GTMSPEAFLQEAQV 232
Query: 142 LGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHL------FRRGPQPLSWAVRMKV 195
+ +L H LV+L E E +V E+M KGSL + L + R PQ + A ++
Sbjct: 233 MKKLRHEKLVQLYAVVSE-EPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIAS 291
Query: 196 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ-V 254
+ + + ++H RD +A+NIL+ K++DFGLA+ D + + Q
Sbjct: 292 GMAYVERMNYVH--------RDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGA 341
Query: 255 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 314
+ APE GR T KSDV+SFG++L EL + K +V PY
Sbjct: 342 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT------KGRV-----------PYPG 384
Query: 315 -DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEAPKNS 373
R++ ++ P + + L QC EP+ RP + A LE
Sbjct: 385 MVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY------ 438
Query: 374 AKLSQSEPHRQTG 386
+ +EP Q G
Sbjct: 439 --FTSTEPQXQPG 449
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 142/333 (42%), Gaps = 41/333 (12%)
Query: 70 KAFTFNELKTATR-NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEG 128
K + ++LK R N LG G FG VY+G Q S P P S + VAVK L PE
Sbjct: 9 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEG---QVSGMPNDP-SPLQVAVKTL-PEV 63
Query: 129 F--QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQP 186
Q ++L E + + +H N+V+ IG L+ R ++ E M G L++ L P+P
Sbjct: 64 CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP 123
Query: 187 -----LSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAE---FNAKLSDFGL 238
L+ + VA A G +L E+ I+RD A N LL AK+ DFG+
Sbjct: 124 SQPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 181
Query: 239 AKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTK 298
A+ M + PE G T+K+D +SFGV+L E+ S
Sbjct: 182 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--------- 232
Query: 299 VGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQY--PQKAAHTAATLALQCLNNEPKLRPR 356
+G PY S + T GG+ P+ + QC ++P+ RP
Sbjct: 233 LGY--------MPYPSKSNQEVLEFVTS-GGRMDPPKNCPGPVYRIMTQCWQHQPEDRPN 283
Query: 357 MSEVLAILERLEAPKNSAKLSQSEPHRQTGPVT 389
+ ILER+E + + + GP+
Sbjct: 284 FA---IILERIEYCTQDPDVINTALPIEYGPLV 313
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 134/313 (42%), Gaps = 57/313 (18%)
Query: 83 NFRPDSLLGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNY 141
+ R + LG+G FG V+ G W VA+K LKP G + +L E
Sbjct: 10 SLRLEVKLGQGCFGEVWMGTW-----------NGTTRVAIKTLKP-GTMSPEAFLQEAQV 57
Query: 142 LGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHL------FRRGPQPLSWAVRMKV 195
+ +L H LV+L E E +V E+M KGSL + L + R PQ + A ++
Sbjct: 58 MKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIAS 116
Query: 196 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ-V 254
+ + + ++H RD +A+NIL+ K++DFGLA+ D + + Q
Sbjct: 117 GMAYVERMNYVH--------RDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGA 166
Query: 255 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 314
+ APE GR T KSDV+SFG++L EL + K +V PY
Sbjct: 167 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT------KGRV-----------PYPG 209
Query: 315 -DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEAPKNS 373
R++ ++ P + + L QC +P+ RP + A LE
Sbjct: 210 MVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDY------ 263
Query: 374 AKLSQSEPHRQTG 386
+ +EP Q G
Sbjct: 264 --FTSTEPQYQPG 274
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 134/312 (42%), Gaps = 40/312 (12%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPE--GFQGHKEWLTEVNYLGQLHH 147
LG G FG VY+G Q S P P S + VAVK L PE Q ++L E + + +H
Sbjct: 39 LGHGAFGEVYEG---QVSGMPNDP-SPLQVAVKTL-PEVCSEQDELDFLMEALIISKFNH 93
Query: 148 PNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQP-----LSWAVRMKVAIGAAKG 202
N+V+ IG L+ R ++ E M G L++ L P+P L+ + VA A G
Sbjct: 94 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 153
Query: 203 LTFLHDAESQVIYRDFKASNILLDAE---FNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 259
+L E+ I+RD A N LL AK+ DFG+A+ M
Sbjct: 154 CQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVK 211
Query: 260 YAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKL 319
+ PE G T+K+D +SFGV+L E+ S +G PY S +
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS---------LGY--------MPYPSKSNQE 254
Query: 320 FRIMDTKLGGQY--PQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEAPKNSAKLS 377
T GG+ P+ + QC ++P+ RP + ILER+E +
Sbjct: 255 VLEFVTS-GGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFA---IILERIEYCTQDPDVI 310
Query: 378 QSEPHRQTGPVT 389
+ + GP+
Sbjct: 311 NTALPIEYGPLV 322
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 134/312 (42%), Gaps = 40/312 (12%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPE--GFQGHKEWLTEVNYLGQLHH 147
LG G FG VY+G Q S P P S + VAVK L PE Q ++L E + + +H
Sbjct: 53 LGHGAFGEVYEG---QVSGMPNDP-SPLQVAVKTL-PEVCSEQDELDFLMEALIISKFNH 107
Query: 148 PNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQP-----LSWAVRMKVAIGAAKG 202
N+V+ IG L+ R ++ E M G L++ L P+P L+ + VA A G
Sbjct: 108 QNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 167
Query: 203 LTFLHDAESQVIYRDFKASNILLDAE---FNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 259
+L E+ I+RD A N LL AK+ DFG+A+ M
Sbjct: 168 CQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 225
Query: 260 YAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKL 319
+ PE G T+K+D +SFGV+L E+ S +G PY S +
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS---------LGY--------MPYPSKSNQE 268
Query: 320 FRIMDTKLGGQY--PQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEAPKNSAKLS 377
T GG+ P+ + QC ++P+ RP + ILER+E +
Sbjct: 269 VLEFVTS-GGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFA---IILERIEYCTQDPDVI 324
Query: 378 QSEPHRQTGPVT 389
+ + GP+
Sbjct: 325 NTALPIEYGPLV 336
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 124/296 (41%), Gaps = 35/296 (11%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTE---- 138
N + LG G FG V ++ + K + + VAVK LK KE L
Sbjct: 39 NLQFGKTLGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 94
Query: 139 VNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGP--------QPLSWA 190
+++LGQ H N+V L+G C G L++ E+ G L N L R+ +PL
Sbjct: 95 MSHLGQ--HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELR 152
Query: 191 VRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHV 250
+ + A+G+ FL A I+RD A N+LL AK+ DFGLA+ V
Sbjct: 153 DLLHFSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 210
Query: 251 STQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAK 310
+ APE + T +SDV+S+G++L E+ S +G+
Sbjct: 211 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS---------LGLN------PY 255
Query: 311 PYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILER 366
P + K ++++ P A ++ C EP RP ++ + L+
Sbjct: 256 PGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQE 311
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 132/302 (43%), Gaps = 47/302 (15%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH-KEWLTEVNYLGQLHHP 148
LGEG FG V K + VAVK LK ++ L+E N L Q++HP
Sbjct: 31 LGEGEFGKVVKA----TAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHP 86
Query: 149 NLVKLIGYCLEGENRLLVYEFMPKGSLENHL---FRRGP-------------------QP 186
+++KL G C + LL+ E+ GSL L + GP +
Sbjct: 87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 187 LSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGD 246
L+ + A ++G+ +L AE ++++RD A NIL+ K+SDFGL++ D
Sbjct: 147 LTMGDLISFAWQISQGMQYL--AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEED 204
Query: 247 RTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLV 306
+Q + A E + TT+SDV+SFGV+L E+++ +G
Sbjct: 205 SXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT---------LG------ 249
Query: 307 DWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILE 365
PY +LF ++ T + P + L LQC EP RP +++ LE
Sbjct: 250 --GNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLE 307
Query: 366 RL 367
++
Sbjct: 308 KM 309
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 124/295 (42%), Gaps = 35/295 (11%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTE---- 138
N + LG G FG V ++ + K + + VAVK LK KE L
Sbjct: 47 NLQFGKTLGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 139 VNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGP--------QPLSWA 190
+++LGQ H N+V L+G C G L++ E+ G L N L R+ +PL
Sbjct: 103 MSHLGQ--HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELR 160
Query: 191 VRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHV 250
+ + A+G+ FL A I+RD A N+LL AK+ DFGLA+ V
Sbjct: 161 DLLHFSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 218
Query: 251 STQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAK 310
+ APE + T +SDV+S+G++L E+ S +G+
Sbjct: 219 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS---------LGLN------PY 263
Query: 311 PYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILE 365
P + K ++++ P A ++ C EP RP ++ + L+
Sbjct: 264 PGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 318
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 125/301 (41%), Gaps = 41/301 (13%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTE---- 138
N + LG G FG V ++ + K + + VAVK LK KE L
Sbjct: 47 NLQFGKTLGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 139 VNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVR------ 192
+++LGQ H N+V L+G C G L++ E+ G L N L R+ P L ++
Sbjct: 103 MSHLGQ--HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPE 160
Query: 193 --------MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPT 244
+ + A+G+ FL A I+RD A N+LL AK+ DFGLA+
Sbjct: 161 EQLSSRDLLHFSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMN 218
Query: 245 GDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQS 304
V + APE + T +SDV+S+G++L E+ S +G+
Sbjct: 219 DSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS---------LGLN-- 267
Query: 305 LVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAIL 364
P + K ++++ P A ++ C EP RP ++ + L
Sbjct: 268 ----PYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFL 323
Query: 365 E 365
+
Sbjct: 324 Q 324
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 142/333 (42%), Gaps = 41/333 (12%)
Query: 70 KAFTFNELKTATR-NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPE- 127
K + ++LK R N LG G FG VY+G Q S P P S + VAVK L PE
Sbjct: 35 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEG---QVSGMPNDP-SPLQVAVKTL-PEV 89
Query: 128 -GFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQP 186
Q ++L E + + +H N+V+ IG L+ R ++ E M G L++ L P+P
Sbjct: 90 CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP 149
Query: 187 -----LSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAE---FNAKLSDFGL 238
L+ + VA A G +L E+ I+RD A N LL AK+ DFG+
Sbjct: 150 SQPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 207
Query: 239 AKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTK 298
A+ M + PE G T+K+D +SFGV+L E+ S
Sbjct: 208 ARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--------- 258
Query: 299 VGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQY--PQKAAHTAATLALQCLNNEPKLRPR 356
+G PY S + T GG+ P+ + QC ++P+ RP
Sbjct: 259 LGY--------MPYPSKSNQEVLEFVTS-GGRMDPPKNCPGPVYRIMTQCWQHQPEDRPN 309
Query: 357 MSEVLAILERLEAPKNSAKLSQSEPHRQTGPVT 389
+ ILER+E + + + GP+
Sbjct: 310 FA---IILERIEYCTQDPDVINTALPIEYGPLV 339
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 132/312 (42%), Gaps = 55/312 (17%)
Query: 83 NFRPDSLLGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNY 141
+ R + LG+G FG V+ G W VA+K LKP G + +L E
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTW-----------NGTTRVAIKTLKP-GTMSPEAFLQEAQV 66
Query: 142 LGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHL------FRRGPQPLSWAVRMKV 195
+ +L H LV+L E E +V E+M KGSL + L + R PQ + A ++
Sbjct: 67 MKKLRHEKLVQLYAVVSE-EPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIAS 125
Query: 196 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVM 255
+ + + ++H RD +A+NIL+ K++DFGLA+ + T
Sbjct: 126 GMAYVERMNYVH--------RDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKF 177
Query: 256 GTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS- 314
+ APE GR T KSDV+SFG++L EL + K +V PY
Sbjct: 178 PIK-WTAPEAALYGRFTIKSDVWSFGILLTELTT------KGRV-----------PYPGM 219
Query: 315 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEAPKNSA 374
R++ ++ P + + L QC +P+ RP + A LE
Sbjct: 220 VNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDY------- 272
Query: 375 KLSQSEPHRQTG 386
+ +EP Q G
Sbjct: 273 -FTSTEPQYQPG 283
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 134/304 (44%), Gaps = 50/304 (16%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQG-HKEWLTEVNY 141
+ + ++GEG FG V K I K G M A+K++K + H+++ E+
Sbjct: 16 DIKFQDVIGEGNFGQVLKARI-------KKDGLRMDAAIKRMKEYASKDDHRDFAGELEV 68
Query: 142 LGQL-HHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRR--------------GPQP 186
L +L HHPN++ L+G C L E+ P G+L + L +
Sbjct: 69 LCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 128
Query: 187 LSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGD 246
LS + A A+G+ +L ++ Q I+RD A NIL+ + AK++DFGL++ G
Sbjct: 129 LSSQQLLHFAADVARGMDYL--SQKQFIHRDLAARNILVGENYVAKIADFGLSR----GQ 182
Query: 247 RTHVSTQVMGTH--GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQS 304
+V + MG + A E + TT SDV+S+GV+L E++S +G
Sbjct: 183 EVYVK-KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS---------LG---- 228
Query: 305 LVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAI 363
PY +L+ + + P L QC +P RP +++L
Sbjct: 229 ----GTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 284
Query: 364 LERL 367
L R+
Sbjct: 285 LNRM 288
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 134/313 (42%), Gaps = 57/313 (18%)
Query: 83 NFRPDSLLGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNY 141
+ R + LG+G FG V+ G W VA+K LKP G + +L E
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTW-----------NGTTRVAIKTLKP-GTMSPEAFLQEAQV 66
Query: 142 LGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHL------FRRGPQPLSWAVRMKV 195
+ +L H LV+L E E +V E+M KGSL + L + R PQ + A ++
Sbjct: 67 MKKLRHEKLVQLYAVVSE-EPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIAS 125
Query: 196 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ-V 254
+ + + ++H RD +A+NIL+ K++DFGLA+ D + + Q
Sbjct: 126 GMAYVERMNYVH--------RDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGA 175
Query: 255 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 314
+ APE GR T KSDV+SFG++L EL + K +V PY
Sbjct: 176 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT------KGRV-----------PYPG 218
Query: 315 -DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEAPKNS 373
R++ ++ P + + L QC +P+ RP + A LE
Sbjct: 219 MVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDY------ 272
Query: 374 AKLSQSEPHRQTG 386
+ +EP Q G
Sbjct: 273 --FTSTEPQYQPG 283
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 134/313 (42%), Gaps = 57/313 (18%)
Query: 83 NFRPDSLLGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNY 141
+ R + LG+G FG V+ G W VA+K LKP G + +L E
Sbjct: 8 SLRLEVKLGQGCFGEVWMGTW-----------NGTTRVAIKTLKP-GTMSPEAFLQEAQV 55
Query: 142 LGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHL------FRRGPQPLSWAVRMKV 195
+ +L H LV+L E E +V E+M KGSL + L + R PQ + A ++
Sbjct: 56 MKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIAS 114
Query: 196 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ-V 254
+ + + ++H RD +A+NIL+ K++DFGLA+ D + + Q
Sbjct: 115 GMAYVERMNYVH--------RDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGA 164
Query: 255 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 314
+ APE GR T KSDV+SFG++L EL + K +V PY
Sbjct: 165 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT------KGRV-----------PYPG 207
Query: 315 -DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEAPKNS 373
R++ ++ P + + L QC +P+ RP + A LE
Sbjct: 208 MVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDY------ 261
Query: 374 AKLSQSEPHRQTG 386
+ +EP Q G
Sbjct: 262 --FTSTEPQYQPG 272
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 134/313 (42%), Gaps = 57/313 (18%)
Query: 83 NFRPDSLLGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNY 141
+ R + LG+G FG V+ G W VA+K LKP G + +L E
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTW-----------NGTTRVAIKTLKP-GTMSPEAFLQEAQV 66
Query: 142 LGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHL------FRRGPQPLSWAVRMKV 195
+ +L H LV+L E E +V E+M KGSL + L + R PQ + A ++
Sbjct: 67 MKKLRHEKLVQLYAVVSE-EPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIAS 125
Query: 196 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ-V 254
+ + + ++H RD +A+NIL+ K++DFGLA+ D + + Q
Sbjct: 126 GMAYVERMNYVH--------RDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGA 175
Query: 255 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 314
+ APE GR T KSDV+SFG++L EL + K +V PY
Sbjct: 176 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT------KGRV-----------PYPG 218
Query: 315 -DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEAPKNS 373
R++ ++ P + + L QC +P+ RP + A LE
Sbjct: 219 MVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDY------ 272
Query: 374 AKLSQSEPHRQTG 386
+ +EP Q G
Sbjct: 273 --FTSTEPQYQPG 283
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 134/313 (42%), Gaps = 57/313 (18%)
Query: 83 NFRPDSLLGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNY 141
+ R + LG+G FG V+ G W VA+K LKP G + +L E
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTW-----------NGTTRVAIKTLKP-GTMSPEAFLQEAQV 66
Query: 142 LGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHL------FRRGPQPLSWAVRMKV 195
+ +L H LV+L E E +V E+M KGSL + L + R PQ + A ++
Sbjct: 67 MKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIAS 125
Query: 196 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ-V 254
+ + + ++H RD +A+NIL+ K++DFGLA+ D + + Q
Sbjct: 126 GMAYVERMNYVH--------RDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGA 175
Query: 255 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 314
+ APE GR T KSDV+SFG++L EL + K +V PY
Sbjct: 176 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT------KGRV-----------PYPG 218
Query: 315 -DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEAPKNS 373
R++ ++ P + + L QC +P+ RP + A LE
Sbjct: 219 MVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDY------ 272
Query: 374 AKLSQSEPHRQTG 386
+ +EP Q G
Sbjct: 273 --FTSTEPQYQPG 283
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 134/304 (44%), Gaps = 50/304 (16%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQG-HKEWLTEVNY 141
+ + ++GEG FG V K I K G M A+K++K + H+++ E+
Sbjct: 26 DIKFQDVIGEGNFGQVLKARI-------KKDGLRMDAAIKRMKEYASKDDHRDFAGELEV 78
Query: 142 LGQL-HHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRR--------------GPQP 186
L +L HHPN++ L+G C L E+ P G+L + L +
Sbjct: 79 LCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 138
Query: 187 LSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGD 246
LS + A A+G+ +L ++ Q I+RD A NIL+ + AK++DFGL++ G
Sbjct: 139 LSSQQLLHFAADVARGMDYL--SQKQFIHRDLAARNILVGENYVAKIADFGLSR----GQ 192
Query: 247 RTHVSTQVMGTH--GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQS 304
+V + MG + A E + TT SDV+S+GV+L E++S +G
Sbjct: 193 EVYVK-KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS---------LG---- 238
Query: 305 LVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAI 363
PY +L+ + + P L QC +P RP +++L
Sbjct: 239 ----GTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 294
Query: 364 LERL 367
L R+
Sbjct: 295 LNRM 298
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 134/312 (42%), Gaps = 40/312 (12%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPE--GFQGHKEWLTEVNYLGQLHH 147
LG G FG VY+G Q S P P S + VAVK L PE Q ++L E + + +H
Sbjct: 79 LGHGAFGEVYEG---QVSGMPNDP-SPLQVAVKTL-PEVCSEQDELDFLMEALIISKFNH 133
Query: 148 PNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQP-----LSWAVRMKVAIGAAKG 202
N+V+ IG L+ R ++ E M G L++ L P+P L+ + VA A G
Sbjct: 134 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 193
Query: 203 LTFLHDAESQVIYRDFKASNILLDAE---FNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 259
+L E+ I+RD A N LL AK+ DFG+A+ M
Sbjct: 194 CQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVK 251
Query: 260 YAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKL 319
+ PE G T+K+D +SFGV+L E+ S +G PY S +
Sbjct: 252 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS---------LGY--------MPYPSKSNQE 294
Query: 320 FRIMDTKLGGQY--PQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEAPKNSAKLS 377
T GG+ P+ + QC ++P+ RP + ILER+E +
Sbjct: 295 VLEFVTS-GGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFA---IILERIEYCTQDPDVI 350
Query: 378 QSEPHRQTGPVT 389
+ + GP+
Sbjct: 351 NTALPIEYGPLV 362
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 134/313 (42%), Gaps = 57/313 (18%)
Query: 83 NFRPDSLLGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNY 141
+ R + LG+G FG V+ G W VA+K LKP G + +L E
Sbjct: 16 SLRLEVKLGQGCFGEVWMGTW-----------NGTTRVAIKTLKP-GTMSPEAFLQEAQV 63
Query: 142 LGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHL------FRRGPQPLSWAVRMKV 195
+ +L H LV+L E E +V E+M KGSL + L + R PQ + + ++
Sbjct: 64 MKKLRHEKLVQLYAVVSE-EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIAS 122
Query: 196 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ-V 254
+ + + ++H RD +A+NIL+ K++DFGLA+ D + + Q
Sbjct: 123 GMAYVERMNYVH--------RDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGA 172
Query: 255 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 314
+ APE GR T KSDV+SFG++L EL + K +V PY
Sbjct: 173 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT------KGRV-----------PYPG 215
Query: 315 -DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEAPKNS 373
R++ ++ P + + L QC EP+ RP + A LE
Sbjct: 216 MVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY------ 269
Query: 374 AKLSQSEPHRQTG 386
+ +EP Q G
Sbjct: 270 --FTSTEPQYQPG 280
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 131/287 (45%), Gaps = 35/287 (12%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEG-FQGHKEWLTEVNYLGQLHHP 148
LG+G FG VY+G ++ K + VAVK + + E+L E + +
Sbjct: 25 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 149 NLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQ--------PLSWAVRMKVAIGAA 200
++V+L+G +G+ L+V E M G L+++L P+ P + +++A A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 201 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 260
G+ +L+ + ++R+ A N ++ +F K+ DFG+ + D + + +
Sbjct: 141 DGMAYLN--AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 198
Query: 261 AAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPY--LSDKRK 318
APE + G TT SD++SFGVVL E+ SL + +PY LS+++
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEI---------------TSLAE--QPYQGLSNEQV 241
Query: 319 LFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILE 365
L +MD Q P L C P +RP E++ +L+
Sbjct: 242 LKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 287
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 132/302 (43%), Gaps = 47/302 (15%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH-KEWLTEVNYLGQLHHP 148
LGEG FG V K + VAVK LK ++ L+E N L Q++HP
Sbjct: 31 LGEGEFGKVVKA----TAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHP 86
Query: 149 NLVKLIGYCLEGENRLLVYEFMPKGSLENHL---FRRGP-------------------QP 186
+++KL G C + LL+ E+ GSL L + GP +
Sbjct: 87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 187 LSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGD 246
L+ + A ++G+ +L AE ++++RD A NIL+ K+SDFGL++ D
Sbjct: 147 LTMGDLISFAWQISQGMQYL--AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEED 204
Query: 247 RTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLV 306
+Q + A E + TT+SDV+SFGV+L E+++ +G
Sbjct: 205 SYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT---------LG------ 249
Query: 307 DWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILE 365
PY +LF ++ T + P + L LQC EP RP +++ LE
Sbjct: 250 --GNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLE 307
Query: 366 RL 367
++
Sbjct: 308 KM 309
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 131/302 (43%), Gaps = 47/302 (15%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH-KEWLTEVNYLGQLHHP 148
LGEG FG V K + VAVK LK ++ L+E N L Q++HP
Sbjct: 31 LGEGEFGKVVKA----TAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHP 86
Query: 149 NLVKLIGYCLEGENRLLVYEFMPKGSLENHL---FRRGP-------------------QP 186
+++KL G C + LL+ E+ GSL L + GP +
Sbjct: 87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 187 LSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGD 246
L+ + A ++G+ +L AE +++RD A NIL+ K+SDFGL++ D
Sbjct: 147 LTMGDLISFAWQISQGMQYL--AEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEED 204
Query: 247 RTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLV 306
+Q + A E + TT+SDV+SFGV+L E+++ +G
Sbjct: 205 SXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT---------LG------ 249
Query: 307 DWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILE 365
PY +LF ++ T + P + L LQC EP RP +++ LE
Sbjct: 250 --GNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLE 307
Query: 366 RL 367
++
Sbjct: 308 KM 309
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 106/232 (45%), Gaps = 32/232 (13%)
Query: 82 RNFRPDSL-----LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWL 136
R FRP L LG+G FG ++ +G V+ +K+L + + +L
Sbjct: 5 RIFRPSDLIHGEVLGKGCFG---------QAIKVTHRETGEVMVMKELIRFDEETQRTFL 55
Query: 137 TEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA 196
EV + L HPN++K IG + + + E++ G+L + + W+ R+ A
Sbjct: 56 KEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRG-IIKSMDSQYPWSQRVSFA 114
Query: 197 IGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLA------KAGPTG----- 245
A G+ +LH +I+RD + N L+ N ++DFGLA K P G
Sbjct: 115 KDIASGMAYLHSM--NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLK 172
Query: 246 --DRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVD 295
DR T V+G + APE + K DV+SFG+VL E++ GR D
Sbjct: 173 KPDRKKRYT-VVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII-GRVNAD 222
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 131/287 (45%), Gaps = 35/287 (12%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEG-FQGHKEWLTEVNYLGQLHHP 148
LG+G FG VY+G ++ K + VAVK + + E+L E + +
Sbjct: 26 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 81
Query: 149 NLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQ--------PLSWAVRMKVAIGAA 200
++V+L+G +G+ L+V E M G L+++L P+ P + +++A A
Sbjct: 82 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 141
Query: 201 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 260
G+ +L+ + ++R+ A N ++ +F K+ DFG+ + D + + +
Sbjct: 142 DGMAYLN--AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 199
Query: 261 AAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPY--LSDKRK 318
APE + G TT SD++SFGVVL E+ SL + +PY LS+++
Sbjct: 200 MAPESLKDGVFTTSSDMWSFGVVLWEI---------------TSLAE--QPYQGLSNEQV 242
Query: 319 LFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILE 365
L +MD Q P L C P +RP E++ +L+
Sbjct: 243 LKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 288
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 132/312 (42%), Gaps = 55/312 (17%)
Query: 83 NFRPDSLLGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNY 141
+ R + LG+G FG V+ G W VA+K LKP G + +L E
Sbjct: 16 SLRLEVKLGQGCFGEVWMGTW-----------NGTTRVAIKTLKP-GTMSPEAFLQEAQV 63
Query: 142 LGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHL------FRRGPQPLSWAVRMKV 195
+ +L H LV+L E E +V E+M KGSL + L + R PQ + + ++
Sbjct: 64 MKKLRHEKLVQLYAVVSE-EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIAS 122
Query: 196 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVM 255
+ + + ++H RD +A+NIL+ K++DFGLA+ + T
Sbjct: 123 GMAYVERMNYVH--------RDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKF 174
Query: 256 GTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS- 314
+ APE GR T KSDV+SFG++L EL + K +V PY
Sbjct: 175 PIK-WTAPEAALYGRFTIKSDVWSFGILLTELTT------KGRV-----------PYPGM 216
Query: 315 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEAPKNSA 374
R++ ++ P + + L QC EP+ RP + A LE
Sbjct: 217 VNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY------- 269
Query: 375 KLSQSEPHRQTG 386
+ +EP Q G
Sbjct: 270 -FTSTEPQYQPG 280
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 134/313 (42%), Gaps = 57/313 (18%)
Query: 83 NFRPDSLLGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNY 141
+ R + LG+G FG V+ G W VA+K LKP G + +L E
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTW-----------NGTTRVAIKTLKP-GTMSPEAFLQEAQV 66
Query: 142 LGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHL------FRRGPQPLSWAVRMKV 195
+ ++ H LV+L E E +V E+M KGSL + L + R PQ + A ++
Sbjct: 67 MKKIRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIAS 125
Query: 196 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ-V 254
+ + + ++H RD +A+NIL+ K++DFGLA+ D + + Q
Sbjct: 126 GMAYVERMNYVH--------RDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGA 175
Query: 255 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 314
+ APE GR T KSDV+SFG++L EL + K +V PY
Sbjct: 176 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT------KGRV-----------PYPG 218
Query: 315 -DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEAPKNS 373
R++ ++ P + + L QC +P+ RP + A LE
Sbjct: 219 MVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDY------ 272
Query: 374 AKLSQSEPHRQTG 386
+ +EP Q G
Sbjct: 273 --FTSTEPQYQPG 283
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 112/214 (52%), Gaps = 22/214 (10%)
Query: 83 NFRPDSLLGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLKPEGF-QGHKEWLTEVN 140
F+ +LG G FG VYKG WI P + VA+K+L+ + +KE L E
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 70
Query: 141 YLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRR----GPQPL-SWAVRMKV 195
+ + +P++ +L+G CL +L++ + MP G L +++ G Q L +W V++
Sbjct: 71 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 127
Query: 196 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVM 255
AKG+ +L D ++++RD A N+L+ + K++DFGLAK ++ + +
Sbjct: 128 ----AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 181
Query: 256 GTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 289
+ A E + T +SDV+S+GV + EL++
Sbjct: 182 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 112/214 (52%), Gaps = 22/214 (10%)
Query: 83 NFRPDSLLGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLKPEGF-QGHKEWLTEVN 140
F+ +LG G FG VYKG WI P + VA+K+L+ + +KE L E
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 73
Query: 141 YLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRR----GPQPL-SWAVRMKV 195
+ + +P++ +L+G CL +L++ + MP G L +++ G Q L +W V++
Sbjct: 74 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 130
Query: 196 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVM 255
AKG+ +L D ++++RD A N+L+ + K++DFGLAK ++ + +
Sbjct: 131 ----AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 184
Query: 256 GTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 289
+ A E + T +SDV+S+GV + EL++
Sbjct: 185 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 127/301 (42%), Gaps = 40/301 (13%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHK---EWLTEV 139
NFR + +G G F VY+ A G+ VA+KK++ K + + E+
Sbjct: 33 NFRIEKKIGRGQFSEVYRA---------ACLLDGVPVALKKVQIFDLMDAKARADCIKEI 83
Query: 140 NYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHL--FRRGPQPLSWAVRMKVAI 197
+ L QL+HPN++K +E +V E G L + F++ + + K +
Sbjct: 84 DLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFV 143
Query: 198 GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 257
L +H +V++RD K +N+ + A KL D GL + + +T + ++GT
Sbjct: 144 QLCSALEHMH--SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS--KTTAAHSLVGT 199
Query: 258 HGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKR 317
Y +PE + KSD++S G +L E+ + P+ DK
Sbjct: 200 PYYMSPERIHENGYNFKSDIWSLGCLLYEMAA------------------LQSPFYGDKM 241
Query: 318 KLFRIMDTKLGGQYP----QKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEAPKNS 373
L+ + YP + L C+N +P+ RP ++ V + +R+ A S
Sbjct: 242 NLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTAS 301
Query: 374 A 374
+
Sbjct: 302 S 302
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 112/214 (52%), Gaps = 22/214 (10%)
Query: 83 NFRPDSLLGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLKPEGF-QGHKEWLTEVN 140
F+ +LG G FG VYKG WI P + VA+K+L+ + +KE L E
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 141 YLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRR----GPQPL-SWAVRMKV 195
+ + +P++ +L+G CL +L++ + MP G L +++ G Q L +W V++
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 128
Query: 196 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVM 255
AKG+ +L D ++++RD A N+L+ + K++DFGLAK ++ + +
Sbjct: 129 ----AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 182
Query: 256 GTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 289
+ A E + T +SDV+S+GV + EL++
Sbjct: 183 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 112/214 (52%), Gaps = 22/214 (10%)
Query: 83 NFRPDSLLGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLKPEGF-QGHKEWLTEVN 140
F+ +LG G FG VYKG WI P + VA+K+L+ + +KE L E
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 141 YLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRR----GPQPL-SWAVRMKV 195
+ + +P++ +L+G CL +L++ + MP G L +++ G Q L +W V++
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 129
Query: 196 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVM 255
AKG+ +L D ++++RD A N+L+ + K++DFGLAK ++ + +
Sbjct: 130 ----AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 183
Query: 256 GTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 289
+ A E + T +SDV+S+GV + EL++
Sbjct: 184 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 111/214 (51%), Gaps = 22/214 (10%)
Query: 83 NFRPDSLLGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLKPEGF-QGHKEWLTEVN 140
F+ +LG G FG VYKG WI P + VA+K+L+ + +KE L E
Sbjct: 26 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 79
Query: 141 YLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRR----GPQPL-SWAVRMKV 195
+ + +P++ +L+G CL +L+ + MP G L +++ G Q L +W V++
Sbjct: 80 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 136
Query: 196 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVM 255
AKG+ +L D ++++RD A N+L+ + K++DFGLAK ++ + +
Sbjct: 137 ----AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 190
Query: 256 GTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 289
+ A E + T +SDV+S+GV + EL++
Sbjct: 191 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 112/214 (52%), Gaps = 22/214 (10%)
Query: 83 NFRPDSLLGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLKPEGF-QGHKEWLTEVN 140
F+ +LG G FG VYKG WI P + VA+K+L+ + +KE L E
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 141 YLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRR----GPQPL-SWAVRMKV 195
+ + +P++ +L+G CL +L++ + MP G L +++ G Q L +W V++
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 126
Query: 196 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVM 255
AKG+ +L D ++++RD A N+L+ + K++DFGLAK ++ + +
Sbjct: 127 ----AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 256 GTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 289
+ A E + T +SDV+S+GV + EL++
Sbjct: 181 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 112/214 (52%), Gaps = 22/214 (10%)
Query: 83 NFRPDSLLGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLKPEGF-QGHKEWLTEVN 140
F+ +LG G FG VYKG WI P + VA+K+L+ + +KE L E
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 70
Query: 141 YLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRR----GPQPL-SWAVRMKV 195
+ + +P++ +L+G CL +L++ + MP G L +++ G Q L +W V++
Sbjct: 71 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGXLLDYVREHKDNIGSQYLLNWCVQI-- 127
Query: 196 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVM 255
AKG+ +L D ++++RD A N+L+ + K++DFGLAK ++ + +
Sbjct: 128 ----AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 181
Query: 256 GTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 289
+ A E + T +SDV+S+GV + EL++
Sbjct: 182 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 133/313 (42%), Gaps = 57/313 (18%)
Query: 83 NFRPDSLLGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNY 141
+ R + LG+G FG V+ G W VA+K LKP G + +L E
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTW-----------NGTTRVAIKTLKP-GTMSPEAFLQEAQV 66
Query: 142 LGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHL------FRRGPQPLSWAVRMKV 195
+ +L H LV+L E E +V E+M KGSL + L + R PQ + A ++
Sbjct: 67 MKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIAS 125
Query: 196 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ-V 254
+ + + ++H RD A+NIL+ K++DFGLA+ D + + Q
Sbjct: 126 GMAYVERMNYVH--------RDLAAANILVGENLVCKVADFGLARL--IEDNEYTARQGA 175
Query: 255 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 314
+ APE GR T KSDV+SFG++L EL + K +V PY
Sbjct: 176 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT------KGRV-----------PYPG 218
Query: 315 -DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEAPKNS 373
R++ ++ P + + L QC +P+ RP + A LE
Sbjct: 219 MVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDY------ 272
Query: 374 AKLSQSEPHRQTG 386
+ +EP Q G
Sbjct: 273 --FTSTEPQYQPG 283
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 111/214 (51%), Gaps = 22/214 (10%)
Query: 83 NFRPDSLLGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLKPEGF-QGHKEWLTEVN 140
F+ +LG G FG VYKG WI P + VA+K+L+ + +KE L E
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 141 YLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRR----GPQPL-SWAVRMKV 195
+ + +P++ +L+G CL +L+ + MP G L +++ G Q L +W V++
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 128
Query: 196 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVM 255
AKG+ +L D ++++RD A N+L+ + K++DFGLAK ++ + +
Sbjct: 129 ----AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 182
Query: 256 GTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 289
+ A E + T +SDV+S+GV + EL++
Sbjct: 183 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 133/313 (42%), Gaps = 57/313 (18%)
Query: 83 NFRPDSLLGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNY 141
+ R + LG+G FG V+ G W VA+K LKP G + +L E
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTW-----------NGTTRVAIKTLKP-GTMSPEAFLQEAQV 66
Query: 142 LGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHL------FRRGPQPLSWAVRMKV 195
+ +L H LV+L E E +V E+M KG L + L + R PQ + A ++
Sbjct: 67 MKKLRHEKLVQLYAVVSE-EPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIAS 125
Query: 196 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ-V 254
+ + + ++H RD +A+NIL+ K++DFGLA+ D + + Q
Sbjct: 126 GMAYVERMNYVH--------RDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGA 175
Query: 255 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 314
+ APE GR T KSDV+SFG++L EL + K +V PY
Sbjct: 176 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT------KGRV-----------PYPG 218
Query: 315 -DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEAPKNS 373
R++ ++ P + + L QC +P+ RP + A LE
Sbjct: 219 MVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDY------ 272
Query: 374 AKLSQSEPHRQTG 386
+ +EP Q G
Sbjct: 273 --FTSTEPQYQPG 283
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 111/214 (51%), Gaps = 22/214 (10%)
Query: 83 NFRPDSLLGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLKPEGF-QGHKEWLTEVN 140
F+ +LG G FG VYKG WI P + VA+K+L+ + +KE L E
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 141 YLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRR----GPQPL-SWAVRMKV 195
+ + +P++ +L+G CL +L+ + MP G L +++ G Q L +W V++
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 129
Query: 196 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVM 255
AKG+ +L D ++++RD A N+L+ + K++DFGLAK ++ + +
Sbjct: 130 ----AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 183
Query: 256 GTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 289
+ A E + T +SDV+S+GV + EL++
Sbjct: 184 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 117/219 (53%), Gaps = 29/219 (13%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLK----PEGFQGHKEWLTE 138
NF+ +GEG +G VYK ++ L+ G VVA+KK++ EG + E
Sbjct: 4 NFQKVEKIGEGTYGVVYKA---RNKLT------GEVVALKKIRLDTETEGVPSTA--IRE 52
Query: 139 VNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMP---KGSLENHLFRRGPQPLSWAVRMK 194
++ L +L+HPN+VKL+ + EN+L LV+EF+ K ++ P PL + +
Sbjct: 53 ISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 195 VAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV 254
+ +GL+F H +V++RD K N+L++ E KL+DFGLA+A RT+ T
Sbjct: 112 LL----QGLSFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THE 163
Query: 255 MGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELLSGRC 292
+ T Y APE + + +T D++S G + E+++ R
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 111/214 (51%), Gaps = 22/214 (10%)
Query: 83 NFRPDSLLGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLKPEGF-QGHKEWLTEVN 140
F+ +LG G FG VYKG WI P + VA+K+L+ + +KE L E
Sbjct: 22 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 75
Query: 141 YLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRR----GPQPL-SWAVRMKV 195
+ + +P++ +L+G CL +L+ + MP G L +++ G Q L +W V++
Sbjct: 76 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 132
Query: 196 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVM 255
AKG+ +L D ++++RD A N+L+ + K++DFGLAK ++ + +
Sbjct: 133 ----AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 186
Query: 256 GTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 289
+ A E + T +SDV+S+GV + EL++
Sbjct: 187 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 111/214 (51%), Gaps = 22/214 (10%)
Query: 83 NFRPDSLLGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLKPEGF-QGHKEWLTEVN 140
F+ +LG G FG VYKG WI P + VA+K+L+ + +KE L E
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 141 YLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRR----GPQPL-SWAVRMKV 195
+ + +P++ +L+G CL +L+ + MP G L +++ G Q L +W V++
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 126
Query: 196 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVM 255
AKG+ +L D ++++RD A N+L+ + K++DFGLAK ++ + +
Sbjct: 127 ----AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 256 GTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 289
+ A E + T +SDV+S+GV + EL++
Sbjct: 181 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 111/214 (51%), Gaps = 22/214 (10%)
Query: 83 NFRPDSLLGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLKPEGF-QGHKEWLTEVN 140
F+ +LG G FG VYKG WI P + VA+K+L+ + +KE L E
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 141 YLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRR----GPQPL-SWAVRMKV 195
+ + +P++ +L+G CL +L+ + MP G L +++ G Q L +W V++
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 129
Query: 196 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVM 255
AKG+ +L D ++++RD A N+L+ + K++DFGLAK ++ + +
Sbjct: 130 ----AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 183
Query: 256 GTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 289
+ A E + T +SDV+S+GV + EL++
Sbjct: 184 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 111/214 (51%), Gaps = 22/214 (10%)
Query: 83 NFRPDSLLGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLKPEGF-QGHKEWLTEVN 140
F+ +LG G FG VYKG WI P + VA+K+L+ + +KE L E
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 141 YLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRR----GPQPL-SWAVRMKV 195
+ + +P++ +L+G CL +L+ + MP G L +++ G Q L +W V++
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 126
Query: 196 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVM 255
AKG+ +L D ++++RD A N+L+ + K++DFGLAK ++ + +
Sbjct: 127 ----AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 256 GTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 289
+ A E + T +SDV+S+GV + EL++
Sbjct: 181 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 123/299 (41%), Gaps = 47/299 (15%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTE----VNYLGQL 145
LG G FG V ++ + K + M VAVK LKP +E L ++YLG
Sbjct: 47 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG-- 100
Query: 146 HHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLS----------------W 189
+H N+V L+G C G L++ E+ G L N L R+ +
Sbjct: 101 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 160
Query: 190 AVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTH 249
+ + AKG+ FL A I+RD A NILL K+ DFGLA+
Sbjct: 161 EDLLSFSYQVAKGMAFL--ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 218
Query: 250 VSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWA 309
V + APE + T +SDV+S+G+ L EL S +G +
Sbjct: 219 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS---------LG--------S 261
Query: 310 KPY--LSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILER 366
PY + K ++++ P+ A + C + +P RP +++ ++E+
Sbjct: 262 SPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK 320
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 111/214 (51%), Gaps = 22/214 (10%)
Query: 83 NFRPDSLLGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLKPEGF-QGHKEWLTEVN 140
F+ +LG G FG VYKG WI P + VA+K+L+ + +KE L E
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 141 YLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRR----GPQPL-SWAVRMKV 195
+ + +P++ +L+G CL +L+ + MP G L +++ G Q L +W V++
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 129
Query: 196 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVM 255
AKG+ +L D ++++RD A N+L+ + K++DFGLAK ++ + +
Sbjct: 130 ----AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 183
Query: 256 GTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 289
+ A E + T +SDV+S+GV + EL++
Sbjct: 184 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 119/288 (41%), Gaps = 41/288 (14%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQG--HKEWLTEVNYLGQLHH 147
LGE FG VYKG H PA VA+K LK + +G +E+ E +L H
Sbjct: 34 LGEDRFGKVYKG----HLFGPAPGEQTQAVAIKTLKDKA-EGPLREEFRHEAMLRARLQH 88
Query: 148 PNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQ--------------PLSWAVRM 193
PN+V L+G + + +++ + G L L R P L +
Sbjct: 89 PNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFV 148
Query: 194 KVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 253
+ A G+ +L + V+++D N+L+ + N K+SD GL + D +
Sbjct: 149 HLVAQIAAGMEYL--SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGN 206
Query: 254 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYL 313
+ + APE + G+ + SD++S+GVVL E+ S G++ PY
Sbjct: 207 SLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS---------YGLQ--------PYC 249
Query: 314 S-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEV 360
+ + ++ + P L ++C N P RPR ++
Sbjct: 250 GYSNQDVVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDI 297
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 111/214 (51%), Gaps = 22/214 (10%)
Query: 83 NFRPDSLLGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLKPEGF-QGHKEWLTEVN 140
F+ +LG G FG VYKG WI P + VA+K+L+ + +KE L E
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 63
Query: 141 YLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRR----GPQPL-SWAVRMKV 195
+ + +P++ +L+G CL +L+ + MP G L +++ G Q L +W V++
Sbjct: 64 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 120
Query: 196 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVM 255
AKG+ +L D ++++RD A N+L+ + K++DFGLAK ++ + +
Sbjct: 121 ----AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 174
Query: 256 GTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 289
+ A E + T +SDV+S+GV + EL++
Sbjct: 175 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 111/214 (51%), Gaps = 22/214 (10%)
Query: 83 NFRPDSLLGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLKPEGF-QGHKEWLTEVN 140
F+ +LG G FG VYKG WI P + VA+K+L+ + +KE L E
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 76
Query: 141 YLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRR----GPQPL-SWAVRMKV 195
+ + +P++ +L+G CL +L+ + MP G L +++ G Q L +W V++
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 133
Query: 196 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVM 255
AKG+ +L D ++++RD A N+L+ + K++DFGLAK ++ + +
Sbjct: 134 ----AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 187
Query: 256 GTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 289
+ A E + T +SDV+S+GV + EL++
Sbjct: 188 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 96/200 (48%), Gaps = 14/200 (7%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
LG G FG V+ G+ + + VAVK LKP G + +L E N + L H
Sbjct: 21 LGAGQFGEVWMGYYNNST----------KVAVKTLKP-GTMSVQAFLEEANLMKTLQHDK 69
Query: 150 LVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDA 209
LV+L E ++ E+M KGSL + L + + + A+G+ ++
Sbjct: 70 LVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE-- 127
Query: 210 ESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATG 269
I+RD +A+N+L+ K++DFGLA+ + T + APE + G
Sbjct: 128 RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIK-WTAPEAINFG 186
Query: 270 RLTTKSDVYSFGVVLLELLS 289
T KSDV+SFG++L E+++
Sbjct: 187 CFTIKSDVWSFGILLYEIVT 206
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 116/222 (52%), Gaps = 29/222 (13%)
Query: 80 ATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLK----PEGFQGHKEW 135
+ NF+ +GEG +G VYK ++ L+ G VVA+KK++ EG
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---RNKLT------GEVVALKKIRLDTETEGVPSTA-- 52
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMP---KGSLENHLFRRGPQPLSWAV 191
+ E++ L +L+HPN+VKL+ + EN+L LV+EF+ K ++ P PL +
Sbjct: 53 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSY 111
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
++ +GL F H +V++RD K N+L++ E KL+DFGLA+A RT+
Sbjct: 112 LFQLL----QGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 165
Query: 252 TQVMGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELLSGRC 292
V T Y APE + + +T D++S G + E+++ R
Sbjct: 166 EVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 116/222 (52%), Gaps = 29/222 (13%)
Query: 80 ATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLK----PEGFQGHKEW 135
+ NF+ +GEG +G VYK ++ L+ G VVA+KK++ EG
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKA---RNKLT------GEVVALKKIRLDTETEGVPSTA-- 51
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMP---KGSLENHLFRRGPQPLSWAV 191
+ E++ L +L+HPN+VKL+ + EN+L LV+EF+ K ++ P PL +
Sbjct: 52 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSY 110
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
++ +GL F H +V++RD K N+L++ E KL+DFGLA+A RT+
Sbjct: 111 LFQLL----QGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 164
Query: 252 TQVMGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELLSGRC 292
V T Y APE + + +T D++S G + E+++ R
Sbjct: 165 EVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 204
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 133/313 (42%), Gaps = 57/313 (18%)
Query: 83 NFRPDSLLGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNY 141
+ R + LG+G FG V+ G W VA+K LKP G + +L E
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTW-----------NGTTRVAIKTLKP-GTMSPEAFLQEAQV 66
Query: 142 LGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHL------FRRGPQPLSWAVRMKV 195
+ +L H LV+L E E +V E+M KG L + L + R PQ + A ++
Sbjct: 67 MKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIAS 125
Query: 196 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ-V 254
+ + + ++H RD +A+NIL+ K++DFGLA+ D + + Q
Sbjct: 126 GMAYVERMNYVH--------RDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGA 175
Query: 255 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 314
+ APE GR T KSDV+SFG++L EL + K +V PY
Sbjct: 176 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT------KGRV-----------PYPG 218
Query: 315 -DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEAPKNS 373
R++ ++ P + + L QC +P+ RP + A LE
Sbjct: 219 MVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDY------ 272
Query: 374 AKLSQSEPHRQTG 386
+ +EP Q G
Sbjct: 273 --FTSTEPQYQPG 283
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 111/214 (51%), Gaps = 22/214 (10%)
Query: 83 NFRPDSLLGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLKPEGF-QGHKEWLTEVN 140
F+ +LG G FG VYKG WI P + VA+K+L+ + +KE L E
Sbjct: 41 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 94
Query: 141 YLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRR----GPQPL-SWAVRMKV 195
+ + +P++ +L+G CL +L+ + MP G L +++ G Q L +W V++
Sbjct: 95 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 151
Query: 196 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVM 255
AKG+ +L D ++++RD A N+L+ + K++DFGLAK ++ + +
Sbjct: 152 ----AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 205
Query: 256 GTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 289
+ A E + T +SDV+S+GV + EL++
Sbjct: 206 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 123/299 (41%), Gaps = 47/299 (15%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTE----VNYLGQL 145
LG G FG V ++ + K + M VAVK LKP +E L ++YLG
Sbjct: 49 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG-- 102
Query: 146 HHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLS----------------W 189
+H N+V L+G C G L++ E+ G L N L R+ +
Sbjct: 103 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 162
Query: 190 AVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTH 249
+ + AKG+ FL A I+RD A NILL K+ DFGLA+
Sbjct: 163 EDLLSFSYQVAKGMAFL--ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 220
Query: 250 VSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWA 309
V + APE + T +SDV+S+G+ L EL S +G +
Sbjct: 221 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS---------LG--------S 263
Query: 310 KPY--LSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILER 366
PY + K ++++ P+ A + C + +P RP +++ ++E+
Sbjct: 264 SPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK 322
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 97/200 (48%), Gaps = 14/200 (7%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
LG G FG V+ G+ + + VAVK LKP G + +L E N + L H
Sbjct: 20 LGAGQFGEVWMGYYNNST----------KVAVKTLKP-GTMSVQAFLEEANLMKTLQHDK 68
Query: 150 LVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDA 209
LV+L + E ++ EFM KGSL + L + + + A+G+ ++
Sbjct: 69 LVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE-- 126
Query: 210 ESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATG 269
I+RD +A+N+L+ K++DFGLA+ + T + APE + G
Sbjct: 127 RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIK-WTAPEAINFG 185
Query: 270 RLTTKSDVYSFGVVLLELLS 289
T KS+V+SFG++L E+++
Sbjct: 186 CFTIKSNVWSFGILLYEIVT 205
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 123/299 (41%), Gaps = 47/299 (15%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTE----VNYLGQL 145
LG G FG V ++ + K + M VAVK LKP +E L ++YLG
Sbjct: 31 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG-- 84
Query: 146 HHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLS----------------W 189
+H N+V L+G C G L++ E+ G L N L R+ +
Sbjct: 85 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 144
Query: 190 AVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTH 249
+ + AKG+ FL A I+RD A NILL K+ DFGLA+
Sbjct: 145 EDLLSFSYQVAKGMAFL--ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 202
Query: 250 VSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWA 309
V + APE + T +SDV+S+G+ L EL S +G +
Sbjct: 203 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS---------LG--------S 245
Query: 310 KPY--LSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILER 366
PY + K ++++ P+ A + C + +P RP +++ ++E+
Sbjct: 246 SPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK 304
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 111/214 (51%), Gaps = 22/214 (10%)
Query: 83 NFRPDSLLGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLKPEGF-QGHKEWLTEVN 140
F+ +LG G FG VYKG WI P + VA+K+L+ + +KE L E
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 141 YLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRR----GPQPL-SWAVRMKV 195
+ + +P++ +L+G CL +L+ + MP G L +++ G Q L +W V++
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGXLLDYVREHKDNIGSQYLLNWCVQI-- 126
Query: 196 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVM 255
AKG+ +L D ++++RD A N+L+ + K++DFGLAK ++ + +
Sbjct: 127 ----AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 256 GTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 289
+ A E + T +SDV+S+GV + EL++
Sbjct: 181 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 127/299 (42%), Gaps = 43/299 (14%)
Query: 90 LGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHP 148
LG G FG V+ G W VA+K LKP G + +L E + +L H
Sbjct: 17 LGNGQFGEVWMGTW-----------NGNTKVAIKTLKP-GTMSPESFLEEAQIMKKLKHD 64
Query: 149 NLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHD 208
LV+L E E +V E+M KGSL + L + L + +A A G+ ++
Sbjct: 65 KLVQLYAVVSE-EPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE- 122
Query: 209 AESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVAT 268
I+RD +++NIL+ K++DFGLA+ + T + APE
Sbjct: 123 -RMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIK-WTAPEAALY 180
Query: 269 GRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKL 327
GR T KSDV+SFG++L EL V K +V PY + R++ ++
Sbjct: 181 GRFTIKSDVWSFGILLTEL------VTKGRV-----------PYPGMNNREVLEQVERGY 223
Query: 328 GGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEAPKNSAKLSQSEPHRQTG 386
PQ + L + C +P+ RP + + LE + +EP Q G
Sbjct: 224 RMPCPQDCPISLHELMIHCWKKDPEERPTFEYLQSFLEDY--------FTATEPQYQPG 274
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 116/222 (52%), Gaps = 29/222 (13%)
Query: 80 ATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLK----PEGFQGHKEW 135
+ NF+ +GEG +G VYK ++ L+ G VVA+KK++ EG
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---RNKLT------GEVVALKKIRLDTETEGVPSTA-- 52
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMP---KGSLENHLFRRGPQPLSWAV 191
+ E++ L +L+HPN+VKL+ + EN+L LV+EF+ K ++ P PL +
Sbjct: 53 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSY 111
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
++ +GL F H +V++RD K N+L++ E KL+DFGLA+A RT+
Sbjct: 112 LFQLL----QGLAFCH--SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXH 165
Query: 252 TQVMGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELLSGRC 292
V T Y APE + + +T D++S G + E+++ R
Sbjct: 166 EVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 116/219 (52%), Gaps = 29/219 (13%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLK----PEGFQGHKEWLTE 138
NF+ +GEG +G VYK ++ L+ G VVA+KK++ EG + E
Sbjct: 3 NFQKVEKIGEGTYGVVYKA---RNKLT------GEVVALKKIRLDTETEGVPSTA--IRE 51
Query: 139 VNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMP---KGSLENHLFRRGPQPLSWAVRMK 194
++ L +L+HPN+VKL+ + EN+L LV+EF+ K ++ P PL + +
Sbjct: 52 ISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 110
Query: 195 VAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV 254
+ +GL F H +V++RD K N+L++ E KL+DFGLA+A RT+ T
Sbjct: 111 LL----QGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THE 162
Query: 255 MGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELLSGRC 292
+ T Y APE + + +T D++S G + E+++ R
Sbjct: 163 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 117/222 (52%), Gaps = 29/222 (13%)
Query: 80 ATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLK----PEGFQGHKEW 135
+ NF+ +GEG +G VYK ++ L+ G VVA+KK++ EG
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKA---RNKLT------GEVVALKKIRLDTETEGVPSTA-- 50
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMP---KGSLENHLFRRGPQPLSWAV 191
+ E++ L +L+HPN+VKL+ + EN+L LV+EF+ K ++ P PL +
Sbjct: 51 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSY 109
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
++ +GL F H +V++RD K N+L++ E KL+DFGLA+A RT+
Sbjct: 110 LFQLL----QGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY-- 161
Query: 252 TQVMGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELLSGRC 292
T + T Y APE + + +T D++S G + E+++ R
Sbjct: 162 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 203
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 123/299 (41%), Gaps = 47/299 (15%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTE----VNYLGQL 145
LG G FG V ++ + K + M VAVK LKP +E L ++YLG
Sbjct: 54 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG-- 107
Query: 146 HHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLS----------------W 189
+H N+V L+G C G L++ E+ G L N L R+ +
Sbjct: 108 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 167
Query: 190 AVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTH 249
+ + AKG+ FL A I+RD A NILL K+ DFGLA+
Sbjct: 168 EDLLSFSYQVAKGMAFL--ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 225
Query: 250 VSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWA 309
V + APE + T +SDV+S+G+ L EL S +G +
Sbjct: 226 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS---------LG--------S 268
Query: 310 KPY--LSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILER 366
PY + K ++++ P+ A + C + +P RP +++ ++E+
Sbjct: 269 SPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK 327
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 116/219 (52%), Gaps = 29/219 (13%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLK----PEGFQGHKEWLTE 138
NF+ +GEG +G VYK ++ L+ G VVA+KK++ EG + E
Sbjct: 4 NFQKVEKIGEGTYGVVYKA---RNKLT------GEVVALKKIRLDTETEGVPSTA--IRE 52
Query: 139 VNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMP---KGSLENHLFRRGPQPLSWAVRMK 194
++ L +L+HPN+VKL+ + EN+L LV+EF+ K ++ P PL + +
Sbjct: 53 ISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 195 VAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV 254
+ +GL F H +V++RD K N+L++ E KL+DFGLA+A RT+ T
Sbjct: 112 LL----QGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THE 163
Query: 255 MGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELLSGRC 292
+ T Y APE + + +T D++S G + E+++ R
Sbjct: 164 VVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 116/219 (52%), Gaps = 29/219 (13%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLK----PEGFQGHKEWLTE 138
NF+ +GEG +G VYK ++ L+ G VVA+KK++ EG + E
Sbjct: 4 NFQKVEKIGEGTYGVVYKA---RNKLT------GEVVALKKIRLDTETEGVPSTA--IRE 52
Query: 139 VNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMP---KGSLENHLFRRGPQPLSWAVRMK 194
++ L +L+HPN+VKL+ + EN+L LV+EF+ K ++ P PL + +
Sbjct: 53 ISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 195 VAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV 254
+ +GL F H +V++RD K N+L++ E KL+DFGLA+A RT+ T
Sbjct: 112 LL----QGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THE 163
Query: 255 MGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELLSGRC 292
+ T Y APE + + +T D++S G + E+++ R
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 116/219 (52%), Gaps = 29/219 (13%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLK----PEGFQGHKEWLTE 138
NF+ +GEG +G VYK ++ L+ G VVA+KK++ EG + E
Sbjct: 3 NFQKVEKIGEGTYGVVYKA---RNKLT------GEVVALKKIRLDTETEGVPSTA--IRE 51
Query: 139 VNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMP---KGSLENHLFRRGPQPLSWAVRMK 194
++ L +L+HPN+VKL+ + EN+L LV+EF+ K ++ P PL + +
Sbjct: 52 ISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 110
Query: 195 VAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV 254
+ +GL F H +V++RD K N+L++ E KL+DFGLA+A RT+ T
Sbjct: 111 LL----QGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THE 162
Query: 255 MGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELLSGRC 292
+ T Y APE + + +T D++S G + E+++ R
Sbjct: 163 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 123/299 (41%), Gaps = 47/299 (15%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTE----VNYLGQL 145
LG G FG V ++ + K + M VAVK LKP +E L ++YLG
Sbjct: 54 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG-- 107
Query: 146 HHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLS----------------W 189
+H N+V L+G C G L++ E+ G L N L R+ +
Sbjct: 108 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 167
Query: 190 AVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTH 249
+ + AKG+ FL A I+RD A NILL K+ DFGLA+
Sbjct: 168 EDLLSFSYQVAKGMAFL--ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYV 225
Query: 250 VSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWA 309
V + APE + T +SDV+S+G+ L EL S +G +
Sbjct: 226 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS---------LG--------S 268
Query: 310 KPY--LSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILER 366
PY + K ++++ P+ A + C + +P RP +++ ++E+
Sbjct: 269 SPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK 327
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 116/222 (52%), Gaps = 29/222 (13%)
Query: 80 ATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLK----PEGFQGHKEW 135
+ NF+ +GEG +G VYK ++ L+ G VVA+KK++ EG
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA---RNKLT------GEVVALKKIRLDTETEGVPSTA-- 49
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMP---KGSLENHLFRRGPQPLSWAV 191
+ E++ L +L+HPN+VKL+ + EN+L LV+EF+ K ++ P PL +
Sbjct: 50 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSY 108
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
++ +GL F H +V++RD K N+L++ E KL+DFGLA+A RT+
Sbjct: 109 LFQLL----QGLAFCH--SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXH 162
Query: 252 TQVMGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELLSGRC 292
V T Y APE + + +T D++S G + E+++ R
Sbjct: 163 EVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 116/219 (52%), Gaps = 29/219 (13%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLK----PEGFQGHKEWLTE 138
NF+ +GEG +G VYK ++ L+ G VVA+KK++ EG + E
Sbjct: 8 NFQKVEKIGEGTYGVVYKA---RNKLT------GEVVALKKIRLDTETEGVPSTA--IRE 56
Query: 139 VNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMP---KGSLENHLFRRGPQPLSWAVRMK 194
++ L +L+HPN+VKL+ + EN+L LV+EF+ K ++ P PL + +
Sbjct: 57 ISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 115
Query: 195 VAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV 254
+ +GL F H +V++RD K N+L++ E KL+DFGLA+A RT+ T
Sbjct: 116 LL----QGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THE 167
Query: 255 MGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELLSGRC 292
+ T Y APE + + +T D++S G + E+++ R
Sbjct: 168 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 206
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 119/288 (41%), Gaps = 41/288 (14%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQG--HKEWLTEVNYLGQLHH 147
LGE FG VYKG H PA VA+K LK + +G +E+ E +L H
Sbjct: 17 LGEDRFGKVYKG----HLFGPAPGEQTQAVAIKTLKDKA-EGPLREEFRHEAMLRARLQH 71
Query: 148 PNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQ--------------PLSWAVRM 193
PN+V L+G + + +++ + G L L R P L +
Sbjct: 72 PNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFV 131
Query: 194 KVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 253
+ A G+ +L + V+++D N+L+ + N K+SD GL + D +
Sbjct: 132 HLVAQIAAGMEYL--SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGN 189
Query: 254 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYL 313
+ + APE + G+ + SD++S+GVVL E+ S G++ PY
Sbjct: 190 SLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS---------YGLQ--------PYC 232
Query: 314 S-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEV 360
+ + ++ + P L ++C N P RPR ++
Sbjct: 233 GYSNQDVVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDI 280
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 116/219 (52%), Gaps = 29/219 (13%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLK----PEGFQGHKEWLTE 138
NF+ +GEG +G VYK ++ L+ G VVA+KK++ EG + E
Sbjct: 4 NFQKVEKIGEGTYGVVYKA---RNKLT------GEVVALKKIRLDTETEGVPSTA--IRE 52
Query: 139 VNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMP---KGSLENHLFRRGPQPLSWAVRMK 194
++ L +L+HPN+VKL+ + EN+L LV+EF+ K ++ P PL + +
Sbjct: 53 ISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 195 VAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV 254
+ +GL F H +V++RD K N+L++ E KL+DFGLA+A RT+ T
Sbjct: 112 LL----QGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THE 163
Query: 255 MGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELLSGRC 292
+ T Y APE + + +T D++S G + E+++ R
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 134/304 (44%), Gaps = 50/304 (16%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQG-HKEWLTEVNY 141
+ + ++GEG FG V K I K G M A+K++K + H+++ E+
Sbjct: 23 DIKFQDVIGEGNFGQVLKARI-------KKDGLRMDAAIKRMKEYASKDDHRDFAGELEV 75
Query: 142 LGQL-HHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRR--------------GPQP 186
L +L HHPN++ L+G C L E+ P G+L + L +
Sbjct: 76 LCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 135
Query: 187 LSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGD 246
LS + A A+G+ +L ++ Q I+R+ A NIL+ + AK++DFGL++ G
Sbjct: 136 LSSQQLLHFAADVARGMDYL--SQKQFIHRNLAARNILVGENYVAKIADFGLSR----GQ 189
Query: 247 RTHVSTQVMGTH--GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQS 304
+V + MG + A E + TT SDV+S+GV+L E++S +G
Sbjct: 190 EVYVK-KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS---------LG---- 235
Query: 305 LVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAI 363
PY +L+ + + P L QC +P RP +++L
Sbjct: 236 ----GTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 291
Query: 364 LERL 367
L R+
Sbjct: 292 LNRM 295
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 116/222 (52%), Gaps = 29/222 (13%)
Query: 80 ATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLK----PEGFQGHKEW 135
+ NF+ +GEG +G VYK ++ L+ G VVA+KK++ EG
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKA---RNKLT------GEVVALKKIRLDTETEGVPSTA-- 50
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMP---KGSLENHLFRRGPQPLSWAV 191
+ E++ L +L+HPN+VKL+ + EN+L LV+EF+ K ++ P PL +
Sbjct: 51 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSY 109
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
++ +GL F H +V++RD K N+L++ E KL+DFGLA+A RT+
Sbjct: 110 LFQLL----QGLAFCH--SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXH 163
Query: 252 TQVMGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELLSGRC 292
V T Y APE + + +T D++S G + E+++ R
Sbjct: 164 EVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 203
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 133/313 (42%), Gaps = 57/313 (18%)
Query: 83 NFRPDSLLGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNY 141
+ R + LG+G FG V+ G W VA+K LKP G + +L E
Sbjct: 186 SLRLEVKLGQGCFGEVWMGTW-----------NGTTRVAIKTLKP-GNMSPEAFLQEAQV 233
Query: 142 LGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHL------FRRGPQPLSWAVRMKV 195
+ +L H LV+L E E +V E+M KGSL + L + R PQ + A ++
Sbjct: 234 MKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIAS 292
Query: 196 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ-V 254
+ + + ++H RD +A+NIL+ K++DFGL + D + + Q
Sbjct: 293 GMAYVERMNYVH--------RDLRAANILVGENLVCKVADFGLGRL--IEDNEYTARQGA 342
Query: 255 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 314
+ APE GR T KSDV+SFG++L EL + K +V PY
Sbjct: 343 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT------KGRV-----------PYPG 385
Query: 315 -DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEAPKNS 373
R++ ++ P + + L QC +P+ RP + A LE
Sbjct: 386 MVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDY------ 439
Query: 374 AKLSQSEPHRQTG 386
+ +EP Q G
Sbjct: 440 --FTSTEPQXQPG 450
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 101/210 (48%), Gaps = 29/210 (13%)
Query: 90 LGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLK-----PEGFQGHKEWLTEVNYLG 143
+G G FG VYKG W VAVK LK PE FQ + EV L
Sbjct: 44 IGSGSFGTVYKGKWHGD-------------VAVKILKVVDPTPEQFQAFR---NEVAVLR 87
Query: 144 QLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGL 203
+ H N++ +GY + +N +V ++ SL HL + + + + + +A A+G+
Sbjct: 88 KTRHVNILLFMGY-MTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQL-IDIARQTAQGM 145
Query: 204 TFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAP 263
+LH +I+RD K++NI L K+ DFGLA + Q G+ + AP
Sbjct: 146 DYLH--AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAP 203
Query: 264 EYV---ATGRLTTKSDVYSFGVVLLELLSG 290
E + + +SDVYS+G+VL EL++G
Sbjct: 204 EVIRMQDNNPFSFQSDVYSYGIVLYELMTG 233
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 116/219 (52%), Gaps = 29/219 (13%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLK----PEGFQGHKEWLTE 138
NF+ +GEG +G VYK ++ L+ G VVA+KK++ EG + E
Sbjct: 11 NFQKVEKIGEGTYGVVYKA---RNKLT------GEVVALKKIRLDTETEGVPSTA--IRE 59
Query: 139 VNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMP---KGSLENHLFRRGPQPLSWAVRMK 194
++ L +L+HPN+VKL+ + EN+L LV+EF+ K ++ P PL + +
Sbjct: 60 ISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 118
Query: 195 VAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV 254
+ +GL F H +V++RD K N+L++ E KL+DFGLA+A RT+ T
Sbjct: 119 LL----QGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THE 170
Query: 255 MGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELLSGRC 292
+ T Y APE + + +T D++S G + E+++ R
Sbjct: 171 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 209
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 116/219 (52%), Gaps = 29/219 (13%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLK----PEGFQGHKEWLTE 138
NF+ +GEG +G VYK ++ L+ G VVA+KK++ EG + E
Sbjct: 11 NFQKVEKIGEGTYGVVYKA---RNKLT------GEVVALKKIRLDTETEGVPSTA--IRE 59
Query: 139 VNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMP---KGSLENHLFRRGPQPLSWAVRMK 194
++ L +L+HPN+VKL+ + EN+L LV+EF+ K ++ P PL + +
Sbjct: 60 ISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 118
Query: 195 VAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV 254
+ +GL F H +V++RD K N+L++ E KL+DFGLA+A RT+ T
Sbjct: 119 LL----QGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THE 170
Query: 255 MGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELLSGRC 292
+ T Y APE + + +T D++S G + E+++ R
Sbjct: 171 VVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRA 209
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 116/222 (52%), Gaps = 29/222 (13%)
Query: 80 ATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLK----PEGFQGHKEW 135
+ NF+ +GEG +G VYK ++ L+ G VVA+KK++ EG
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA---RNKLT------GEVVALKKIRLDTETEGVPSTA-- 49
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMP---KGSLENHLFRRGPQPLSWAV 191
+ E++ L +L+HPN+VKL+ + EN+L LV+EF+ K ++ P PL +
Sbjct: 50 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSY 108
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
++ +GL F H +V++RD K N+L++ E KL+DFGLA+A RT+
Sbjct: 109 LFQLL----QGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 162
Query: 252 TQVMGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELLSGRC 292
V T Y APE + + +T D++S G + E+++ R
Sbjct: 163 EVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 116/222 (52%), Gaps = 29/222 (13%)
Query: 80 ATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLK----PEGFQGHKEW 135
+ NF+ +GEG +G VYK ++ L+ G VVA+KK++ EG
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA---RNKLT------GEVVALKKIRLDTETEGVPSTA-- 49
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMP---KGSLENHLFRRGPQPLSWAV 191
+ E++ L +L+HPN+VKL+ + EN+L LV+EF+ K ++ P PL +
Sbjct: 50 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSY 108
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
++ +GL F H +V++RD K N+L++ E KL+DFGLA+A RT+
Sbjct: 109 LFQLL----QGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 162
Query: 252 TQVMGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELLSGRC 292
V T Y APE + + +T D++S G + E+++ R
Sbjct: 163 EVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 116/222 (52%), Gaps = 29/222 (13%)
Query: 80 ATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLK----PEGFQGHKEW 135
+ NF+ +GEG +G VYK ++ L+ G VVA+KK++ EG
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA---RNKLT------GEVVALKKIRLDTETEGVPSTA-- 49
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMP---KGSLENHLFRRGPQPLSWAV 191
+ E++ L +L+HPN+VKL+ + EN+L LV+EF+ K ++ P PL +
Sbjct: 50 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSY 108
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
++ +GL F H +V++RD K N+L++ E KL+DFGLA+A RT+
Sbjct: 109 LFQLL----QGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 162
Query: 252 TQVMGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELLSGRC 292
V T Y APE + + +T D++S G + E+++ R
Sbjct: 163 EVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 104/208 (50%), Gaps = 19/208 (9%)
Query: 87 DSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLH 146
D LG G FG V KG+ + + + + + + E L E N + QL
Sbjct: 375 DKELGSGNFGTVKKGY---YQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLD 429
Query: 147 HPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFL 206
+P +V++IG C E E+ +LV E G L +L + + + +++ + G+ +L
Sbjct: 430 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYL 486
Query: 207 HDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG-----YA 261
ES ++RD A N+LL + AK+SDFGL+KA D + Q THG +
Sbjct: 487 E--ESNFVHRDLAARNVLLVTQHYAKISDFGLSKA-LRADENYYKAQ---THGKWPVKWY 540
Query: 262 APEYVATGRLTTKSDVYSFGVVLLELLS 289
APE + + ++KSDV+SFGV++ E S
Sbjct: 541 APECINYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 104/208 (50%), Gaps = 19/208 (9%)
Query: 87 DSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLH 146
D LG G FG V KG+ + + + + + + E L E N + QL
Sbjct: 374 DKELGSGNFGTVKKGY---YQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLD 428
Query: 147 HPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFL 206
+P +V++IG C E E+ +LV E G L +L + + + +++ + G+ +L
Sbjct: 429 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYL 485
Query: 207 HDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG-----YA 261
ES ++RD A N+LL + AK+SDFGL+KA D + Q THG +
Sbjct: 486 E--ESNFVHRDLAARNVLLVTQHYAKISDFGLSKA-LRADENYYKAQ---THGKWPVKWY 539
Query: 262 APEYVATGRLTTKSDVYSFGVVLLELLS 289
APE + + ++KSDV+SFGV++ E S
Sbjct: 540 APECINYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 104/217 (47%), Gaps = 22/217 (10%)
Query: 80 ATRNFRPDS---LLGE-GGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEW 135
TR+ P+ ++GE G FG VYK + ++ A K + + + +++
Sbjct: 4 VTRDLNPEDFWEIIGELGDFGKVYKA---------QNKETSVLAAAKVIDTKSEEELEDY 54
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKV 195
+ E++ L HPN+VKL+ N ++ EF G+++ + +PL+ + V
Sbjct: 55 MVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLEL-ERPLTESQIQVV 113
Query: 196 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVM 255
L +LHD +++I+RD KA NIL + + KL+DFG++ A T +
Sbjct: 114 CKQTLDALNYLHD--NKIIHRDLKAGNILFTLDGDIKLADFGVS-AKNTRTXIQRRDSFI 170
Query: 256 GTHGYAAPEYVATGR-----LTTKSDVYSFGVVLLEL 287
GT + APE V K+DV+S G+ L+E+
Sbjct: 171 GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 116/222 (52%), Gaps = 29/222 (13%)
Query: 80 ATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLK----PEGFQGHKEW 135
+ NF+ +GEG +G VYK ++ L+ G VVA+KK++ EG
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---RNKLT------GEVVALKKIRLDTETEGVPSTA-- 52
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMP---KGSLENHLFRRGPQPLSWAV 191
+ E++ L +L+HPN+VKL+ + EN+L LV+EF+ K ++ P PL +
Sbjct: 53 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSY 111
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
++ +GL F H +V++RD K N+L++ E KL+DFGLA+A RT+
Sbjct: 112 LFQLL----QGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 165
Query: 252 TQVMGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELLSGRC 292
V T Y APE + + +T D++S G + E+++ R
Sbjct: 166 EVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 116/222 (52%), Gaps = 29/222 (13%)
Query: 80 ATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLK----PEGFQGHKEW 135
+ NF+ +GEG +G VYK ++ L+ G VVA+KK++ EG
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKA---RNKLT------GEVVALKKIRLDTETEGVPSTA-- 51
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMP---KGSLENHLFRRGPQPLSWAV 191
+ E++ L +L+HPN+VKL+ + EN+L LV+EF+ K ++ P PL +
Sbjct: 52 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSY 110
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
++ +GL F H +V++RD K N+L++ E KL+DFGLA+A RT+
Sbjct: 111 LFQLL----QGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 164
Query: 252 TQVMGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELLSGRC 292
V T Y APE + + +T D++S G + E+++ R
Sbjct: 165 EVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 204
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 104/208 (50%), Gaps = 19/208 (9%)
Query: 87 DSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLH 146
D LG G FG V KG+ + + + + + + E L E N + QL
Sbjct: 32 DKELGSGNFGTVKKGY---YQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLD 86
Query: 147 HPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFL 206
+P +V++IG C E E+ +LV E G L +L + + + +++ + G+ +L
Sbjct: 87 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYL 143
Query: 207 HDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG-----YA 261
ES ++RD A N+LL + AK+SDFGL+KA D + Q THG +
Sbjct: 144 E--ESNFVHRDLAARNVLLVTQHYAKISDFGLSKA-LRADENYYKAQ---THGKWPVKWY 197
Query: 262 APEYVATGRLTTKSDVYSFGVVLLELLS 289
APE + + ++KSDV+SFGV++ E S
Sbjct: 198 APECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 104/208 (50%), Gaps = 19/208 (9%)
Query: 87 DSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLH 146
D LG G FG V KG+ + + + + + + E L E N + QL
Sbjct: 32 DKELGSGNFGTVKKGY---YQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLD 86
Query: 147 HPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFL 206
+P +V++IG C E E+ +LV E G L +L + + + +++ + G+ +L
Sbjct: 87 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYL 143
Query: 207 HDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG-----YA 261
ES ++RD A N+LL + AK+SDFGL+KA D + Q THG +
Sbjct: 144 E--ESNFVHRDLAARNVLLVTQHYAKISDFGLSKA-LRADENYYKAQ---THGKWPVKWY 197
Query: 262 APEYVATGRLTTKSDVYSFGVVLLELLS 289
APE + + ++KSDV+SFGV++ E S
Sbjct: 198 APECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 116/222 (52%), Gaps = 29/222 (13%)
Query: 80 ATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLK----PEGFQGHKEW 135
+ NF+ +GEG +G VYK ++ L+ G VVA+KK++ EG
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKA---RNKLT------GEVVALKKIRLDTETEGVPSTA-- 50
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMP---KGSLENHLFRRGPQPLSWAV 191
+ E++ L +L+HPN+VKL+ + EN+L LV+EF+ K ++ P PL +
Sbjct: 51 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSY 109
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
++ +GL F H +V++RD K N+L++ E KL+DFGLA+A RT+
Sbjct: 110 LFQLL----QGLAFCH--SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXH 163
Query: 252 TQVMGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELLSGRC 292
V T Y APE + + +T D++S G + E+++ R
Sbjct: 164 EVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 203
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 116/222 (52%), Gaps = 29/222 (13%)
Query: 80 ATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLK----PEGFQGHKEW 135
+ NF+ +GEG +G VYK ++ L+ G VVA+KK++ EG
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKA---RNKLT------GEVVALKKIRLDTETEGVPSTA-- 51
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMP---KGSLENHLFRRGPQPLSWAV 191
+ E++ L +L+HPN+VKL+ + EN+L LV+EF+ K ++ P PL +
Sbjct: 52 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSY 110
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
++ +GL F H +V++RD K N+L++ E KL+DFGLA+A RT+
Sbjct: 111 LFQLL----QGLAFCH--SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXH 164
Query: 252 TQVMGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELLSGRC 292
V T Y APE + + +T D++S G + E+++ R
Sbjct: 165 EVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 204
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 115/219 (52%), Gaps = 29/219 (13%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLK----PEGFQGHKEWLTE 138
NF+ +GEG +G VYK ++ L+ G VVA+KK++ EG + E
Sbjct: 3 NFQKVEKIGEGTYGVVYKA---RNKLT------GEVVALKKIRLDTETEGVPSTA--IRE 51
Query: 139 VNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMP---KGSLENHLFRRGPQPLSWAVRMK 194
++ L +L+HPN+VKL+ + EN+L LV+EF+ K ++ P PL + +
Sbjct: 52 ISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 110
Query: 195 VAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV 254
+ +GL F H +V++RD K N+L++ E KL+DFGLA+A RT+ V
Sbjct: 111 LL----QGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 164
Query: 255 MGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELLSGRC 292
T Y APE + + +T D++S G + E+++ R
Sbjct: 165 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 116/222 (52%), Gaps = 29/222 (13%)
Query: 80 ATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLK----PEGFQGHKEW 135
+ NF+ +GEG +G VYK ++ L+ G VVA+KK++ EG
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKA---RNKLT------GEVVALKKIRLDTETEGVPSTA-- 51
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMP---KGSLENHLFRRGPQPLSWAV 191
+ E++ L +L+HPN+VKL+ + EN+L LV+EF+ K ++ P PL +
Sbjct: 52 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSY 110
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
++ +GL F H +V++RD K N+L++ E KL+DFGLA+A RT+
Sbjct: 111 LFQLL----QGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 164
Query: 252 TQVMGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELLSGRC 292
V T Y APE + + +T D++S G + E+++ R
Sbjct: 165 EVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 204
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 116/222 (52%), Gaps = 29/222 (13%)
Query: 80 ATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLK----PEGFQGHKEW 135
+ NF+ +GEG +G VYK ++ L+ G VVA+KK++ EG
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKA---RNKLT------GEVVALKKIRLDTETEGVPSTA-- 50
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMP---KGSLENHLFRRGPQPLSWAV 191
+ E++ L +L+HPN+VKL+ + EN+L LV+EF+ K ++ P PL +
Sbjct: 51 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSY 109
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
++ +GL F H +V++RD K N+L++ E KL+DFGLA+A RT+
Sbjct: 110 LFQLL----QGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 163
Query: 252 TQVMGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELLSGRC 292
V T Y APE + + +T D++S G + E+++ R
Sbjct: 164 EVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 203
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 115/219 (52%), Gaps = 29/219 (13%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLK----PEGFQGHKEWLTE 138
NF+ +GEG +G VYK ++ L+ G VVA+KK++ EG + E
Sbjct: 3 NFQKVEKIGEGTYGVVYKA---RNKLT------GEVVALKKIRLDTETEGVPSTA--IRE 51
Query: 139 VNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMP---KGSLENHLFRRGPQPLSWAVRMK 194
++ L +L+HPN+VKL+ + EN+L LV+EF+ K ++ P PL + +
Sbjct: 52 ISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 110
Query: 195 VAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV 254
+ +GL F H +V++RD K N+L++ E KL+DFGLA+A RT+ V
Sbjct: 111 LL----QGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 164
Query: 255 MGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELLSGRC 292
T Y APE + + +T D++S G + E+++ R
Sbjct: 165 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 104/208 (50%), Gaps = 19/208 (9%)
Query: 87 DSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLH 146
D LG G FG V KG+ + + + + + + E L E N + QL
Sbjct: 30 DKELGSGNFGTVKKGY---YQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLD 84
Query: 147 HPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFL 206
+P +V++IG C E E+ +LV E G L +L + + + +++ + G+ +L
Sbjct: 85 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYL 141
Query: 207 HDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG-----YA 261
ES ++RD A N+LL + AK+SDFGL+KA D + Q THG +
Sbjct: 142 E--ESNFVHRDLAARNVLLVTQHYAKISDFGLSKA-LRADENYYKAQ---THGKWPVKWY 195
Query: 262 APEYVATGRLTTKSDVYSFGVVLLELLS 289
APE + + ++KSDV+SFGV++ E S
Sbjct: 196 APECINYYKFSSKSDVWSFGVLMWEAFS 223
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 116/222 (52%), Gaps = 29/222 (13%)
Query: 80 ATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLK----PEGFQGHKEW 135
+ NF+ +GEG +G VYK ++ L+ G VVA+KK++ EG
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---RNKLT------GEVVALKKIRLDTETEGVPSTA-- 52
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMP---KGSLENHLFRRGPQPLSWAV 191
+ E++ L +L+HPN+VKL+ + EN+L LV+EF+ K ++ P PL +
Sbjct: 53 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSY 111
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
++ +GL F H +V++RD K N+L++ E KL+DFGLA+A RT+
Sbjct: 112 LFQLL----QGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 165
Query: 252 TQVMGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELLSGRC 292
V T Y APE + + +T D++S G + E+++ R
Sbjct: 166 EVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 116/222 (52%), Gaps = 29/222 (13%)
Query: 80 ATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLK----PEGFQGHKEW 135
+ NF+ +GEG +G VYK ++ L+ G VVA+KK++ EG
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKA---RNKLT------GEVVALKKIRLDTETEGVPSTA-- 53
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMP---KGSLENHLFRRGPQPLSWAV 191
+ E++ L +L+HPN+VKL+ + EN+L LV+EF+ K ++ P PL +
Sbjct: 54 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSY 112
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
++ +GL F H +V++RD K N+L++ E KL+DFGLA+A RT+
Sbjct: 113 LFQLL----QGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 166
Query: 252 TQVMGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELLSGRC 292
V T Y APE + + +T D++S G + E+++ R
Sbjct: 167 EVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 206
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 116/222 (52%), Gaps = 29/222 (13%)
Query: 80 ATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLK----PEGFQGHKEW 135
+ NF+ +GEG +G VYK ++ L+ G VVA+KK++ EG
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---RNKLT------GEVVALKKIRLDTETEGVPSTA-- 52
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMP---KGSLENHLFRRGPQPLSWAV 191
+ E++ L +L+HPN+VKL+ + EN+L LV+EF+ K ++ P PL +
Sbjct: 53 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSY 111
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
++ +GL F H +V++RD K N+L++ E KL+DFGLA+A RT+
Sbjct: 112 LFQLL----QGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 165
Query: 252 TQVMGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELLSGRC 292
V T Y APE + + +T D++S G + E+++ R
Sbjct: 166 EVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 104/208 (50%), Gaps = 19/208 (9%)
Query: 87 DSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLH 146
D LG G FG V KG+ + + + + + + E L E N + QL
Sbjct: 22 DKELGSGNFGTVKKGY---YQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLD 76
Query: 147 HPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFL 206
+P +V++IG C E E+ +LV E G L +L + + + +++ + G+ +L
Sbjct: 77 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYL 133
Query: 207 HDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG-----YA 261
ES ++RD A N+LL + AK+SDFGL+KA D + Q THG +
Sbjct: 134 E--ESNFVHRDLAARNVLLVTQHYAKISDFGLSKA-LRADENYYKAQ---THGKWPVKWY 187
Query: 262 APEYVATGRLTTKSDVYSFGVVLLELLS 289
APE + + ++KSDV+SFGV++ E S
Sbjct: 188 APECINYYKFSSKSDVWSFGVLMWEAFS 215
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 116/222 (52%), Gaps = 29/222 (13%)
Query: 80 ATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLK----PEGFQGHKEW 135
+ NF+ +GEG +G VYK ++ L+ G VVA+KK++ EG
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA---RNKLT------GEVVALKKIRLDTETEGVPSTA-- 49
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMP---KGSLENHLFRRGPQPLSWAV 191
+ E++ L +L+HPN+VKL+ + EN+L LV+EF+ K ++ P PL +
Sbjct: 50 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSY 108
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
++ +GL F H +V++RD K N+L++ E KL+DFGLA+A RT+
Sbjct: 109 LFQLL----QGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 162
Query: 252 TQVMGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELLSGRC 292
V T Y APE + + +T D++S G + E+++ R
Sbjct: 163 EVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 115/219 (52%), Gaps = 29/219 (13%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLK----PEGFQGHKEWLTE 138
NF+ +GEG +G VYK ++ L+ G VVA+KK++ EG + E
Sbjct: 5 NFQKVEKIGEGTYGVVYKA---RNKLT------GEVVALKKIRLDTETEGVPSTA--IRE 53
Query: 139 VNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMP---KGSLENHLFRRGPQPLSWAVRMK 194
++ L +L+HPN+VKL+ + EN+L LV+EF+ K ++ P PL + +
Sbjct: 54 ISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 112
Query: 195 VAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV 254
+ +GL F H +V++RD K N+L++ E KL+DFGLA+A RT+ V
Sbjct: 113 LL----QGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 166
Query: 255 MGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELLSGRC 292
T Y APE + + +T D++S G + E+++ R
Sbjct: 167 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 203
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 135/315 (42%), Gaps = 49/315 (15%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH-KEWLTEVNYLGQL-HH 147
LGEG FG V + L KP VAVK LK + + + ++E+ + + H
Sbjct: 36 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 148 PNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVR--------------M 193
N++ L+G C + ++ E+ KG+L +L R P L ++ +
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLV 153
Query: 194 KVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 253
A A+G+ +L A + I+RD A N+L+ + K++DFGLA+ D H+
Sbjct: 154 SCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDXX 206
Query: 254 VMGTHG-----YAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW 308
T+G + APE + T +SDV+SFGV+L E+ + +G
Sbjct: 207 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT---------LG-------- 249
Query: 309 AKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 367
PY +LF+++ P + + C + P RP +++ L+R+
Sbjct: 250 GSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 309
Query: 368 EA-PKNSAKLSQSEP 381
A N L S P
Sbjct: 310 VALTSNQEXLDLSMP 324
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 110/214 (51%), Gaps = 22/214 (10%)
Query: 83 NFRPDSLLGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLKPEGF-QGHKEWLTEVN 140
F+ +LG G FG VYKG WI P + VA+ +L+ + +KE L E
Sbjct: 50 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIMELREATSPKANKEILDEAY 103
Query: 141 YLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRR----GPQPL-SWAVRMKV 195
+ + +P++ +L+G CL +L+ + MP G L +++ G Q L +W V++
Sbjct: 104 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 160
Query: 196 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVM 255
AKG+ +L D ++++RD A N+L+ + K++DFGLAK ++ + +
Sbjct: 161 ----AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 214
Query: 256 GTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 289
+ A E + T +SDV+S+GV + EL++
Sbjct: 215 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 104/208 (50%), Gaps = 19/208 (9%)
Query: 87 DSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLH 146
D LG G FG V KG+ + + + + + + E L E N + QL
Sbjct: 10 DKELGSGNFGTVKKGY---YQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLD 64
Query: 147 HPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFL 206
+P +V++IG C E E+ +LV E G L +L + + + +++ + G+ +L
Sbjct: 65 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYL 121
Query: 207 HDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG-----YA 261
ES ++RD A N+LL + AK+SDFGL+KA D + Q THG +
Sbjct: 122 E--ESNFVHRDLAARNVLLVTQHYAKISDFGLSKA-LRADENYYKAQ---THGKWPVKWY 175
Query: 262 APEYVATGRLTTKSDVYSFGVVLLELLS 289
APE + + ++KSDV+SFGV++ E S
Sbjct: 176 APECINYYKFSSKSDVWSFGVLMWEAFS 203
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 104/208 (50%), Gaps = 19/208 (9%)
Query: 87 DSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLH 146
D LG G FG V KG+ + + + + + + E L E N + QL
Sbjct: 16 DKELGSGNFGTVKKGY---YQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLD 70
Query: 147 HPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFL 206
+P +V++IG C E E+ +LV E G L +L + + + +++ + G+ +L
Sbjct: 71 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYL 127
Query: 207 HDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG-----YA 261
ES ++RD A N+LL + AK+SDFGL+KA D + Q THG +
Sbjct: 128 E--ESNFVHRDLAARNVLLVTQHYAKISDFGLSKA-LRADENYYKAQ---THGKWPVKWY 181
Query: 262 APEYVATGRLTTKSDVYSFGVVLLELLS 289
APE + + ++KSDV+SFGV++ E S
Sbjct: 182 APECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 104/208 (50%), Gaps = 19/208 (9%)
Query: 87 DSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLH 146
D LG G FG V KG+ + + + + + + E L E N + QL
Sbjct: 12 DKELGSGNFGTVKKGY---YQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLD 66
Query: 147 HPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFL 206
+P +V++IG C E E+ +LV E G L +L + + + +++ + G+ +L
Sbjct: 67 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYL 123
Query: 207 HDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG-----YA 261
ES ++RD A N+LL + AK+SDFGL+KA D + Q THG +
Sbjct: 124 E--ESNFVHRDLAARNVLLVTQHYAKISDFGLSKA-LRADENYYKAQ---THGKWPVKWY 177
Query: 262 APEYVATGRLTTKSDVYSFGVVLLELLS 289
APE + + ++KSDV+SFGV++ E S
Sbjct: 178 APECINYYKFSSKSDVWSFGVLMWEAFS 205
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 111/214 (51%), Gaps = 22/214 (10%)
Query: 83 NFRPDSLLGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLKPEGF-QGHKEWLTEVN 140
F+ +LG G FG VYKG WI P + VA+K+L+ + +KE L E
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 66
Query: 141 YLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRR----GPQPL-SWAVRMKV 195
+ + +P++ +L+G CL +L+ + MP G L +++ G Q L +W V++
Sbjct: 67 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 123
Query: 196 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVM 255
A+G+ +L D ++++RD A N+L+ + K++DFGLAK ++ + +
Sbjct: 124 ----AEGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 177
Query: 256 GTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 289
+ A E + T +SDV+S+GV + EL++
Sbjct: 178 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 111/214 (51%), Gaps = 22/214 (10%)
Query: 83 NFRPDSLLGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLKPEGF-QGHKEWLTEVN 140
F+ +L G FG VYKG WI P + VA+K+L+ + +KE L E
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 76
Query: 141 YLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRR----GPQPL-SWAVRMKV 195
+ + +P++ +L+G CL +L++ + MP G L +++ G Q L +W V++
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 133
Query: 196 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVM 255
AKG+ +L D ++++RD A N+L+ + K++DFGLAK ++ + +
Sbjct: 134 ----AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 187
Query: 256 GTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 289
+ A E + T +SDV+S+GV + EL++
Sbjct: 188 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 111/214 (51%), Gaps = 22/214 (10%)
Query: 83 NFRPDSLLGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLKPEGF-QGHKEWLTEVN 140
F+ +LG G FG VYKG WI P + VA+K+L+ + +KE L E
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 73
Query: 141 YLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRR----GPQPL-SWAVRMKV 195
+ + +P++ +L+G CL +L++ + MP G L +++ G Q L +W V++
Sbjct: 74 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 130
Query: 196 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVM 255
AKG+ +L D ++++RD A N+L+ + K++DFG AK ++ + +
Sbjct: 131 ----AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 184
Query: 256 GTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 289
+ A E + T +SDV+S+GV + EL++
Sbjct: 185 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 123/299 (41%), Gaps = 39/299 (13%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTE---- 138
N + LG G FG V ++ + K + + VAVK LK KE L
Sbjct: 47 NLQFGKTLGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 139 VNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRR------------GPQP 186
+++LGQ H N+V L+G C G L++ E+ G L N L R+
Sbjct: 103 MSHLGQ--HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANST 160
Query: 187 LSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGD 246
LS + + A+G+ FL A I+RD A N+LL AK+ DFGLA+
Sbjct: 161 LSTRDLLHFSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS 218
Query: 247 RTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLV 306
V + APE + T +SDV+S+G++L E+ S +G+
Sbjct: 219 NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS---------LGLN---- 265
Query: 307 DWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILE 365
P + K ++++ P A ++ C EP RP ++ + L+
Sbjct: 266 --PYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 322
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 110/214 (51%), Gaps = 22/214 (10%)
Query: 83 NFRPDSLLGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLKPEGF-QGHKEWLTEVN 140
F+ +L G FG VYKG WI P + VA+K+L+ + +KE L E
Sbjct: 16 EFKKIKVLSSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 141 YLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRR----GPQPL-SWAVRMKV 195
+ + +P++ +L+G CL +L+ + MP G L +++ G Q L +W V++
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 126
Query: 196 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVM 255
AKG+ +L D ++++RD A N+L+ + K++DFGLAK ++ + +
Sbjct: 127 ----AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 256 GTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 289
+ A E + T +SDV+S+GV + EL++
Sbjct: 181 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 126/309 (40%), Gaps = 48/309 (15%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTE---- 138
N + LG G FG V ++ + K + + VAVK LK KE L
Sbjct: 32 NLQFGKTLGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 87
Query: 139 VNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRR-----GP--------- 184
+++LGQ H N+V L+G C G L++ E+ G L N L R+ GP
Sbjct: 88 MSHLGQ--HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPE 145
Query: 185 -------QPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFG 237
+PL + + A+G+ FL A I+RD A N+LL AK+ DFG
Sbjct: 146 GLDKEDGRPLELRDLLHFSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFG 203
Query: 238 LAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKT 297
LA+ V + APE + T +SDV+S+G++L E+ S
Sbjct: 204 LARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS-------- 255
Query: 298 KVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRM 357
+G+ P + K ++++ P A ++ C EP RP
Sbjct: 256 -LGLN------PYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTF 308
Query: 358 SEVLAILER 366
++ + L+
Sbjct: 309 QQICSFLQE 317
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 111/214 (51%), Gaps = 22/214 (10%)
Query: 83 NFRPDSLLGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLKPEGF-QGHKEWLTEVN 140
F+ +LG G FG VYKG WI P + VA+K+L+ + +KE L E
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 141 YLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRR----GPQPL-SWAVRMKV 195
+ + +P++ +L+G CL +L++ + MP G L +++ G Q L +W V++
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 128
Query: 196 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVM 255
AKG+ +L D ++++RD A N+L+ + K++DFG AK ++ + +
Sbjct: 129 ----AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 182
Query: 256 GTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 289
+ A E + T +SDV+S+GV + EL++
Sbjct: 183 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 111/214 (51%), Gaps = 22/214 (10%)
Query: 83 NFRPDSLLGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLKPEGF-QGHKEWLTEVN 140
F+ +LG G FG VYKG WI P + VA+K+L+ + +KE L E
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 141 YLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRR----GPQPL-SWAVRMKV 195
+ + +P++ +L+G CL +L++ + MP G L +++ G Q L +W V++
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 128
Query: 196 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVM 255
AKG+ +L D ++++RD A N+L+ + K++DFG AK ++ + +
Sbjct: 129 ----AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 182
Query: 256 GTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 289
+ A E + T +SDV+S+GV + EL++
Sbjct: 183 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 110/214 (51%), Gaps = 22/214 (10%)
Query: 83 NFRPDSLLGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLKPEGF-QGHKEWLTEVN 140
F+ +L G FG VYKG WI P + VA+K+L+ + +KE L E
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 76
Query: 141 YLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRR----GPQPL-SWAVRMKV 195
+ + +P++ +L+G CL +L+ + MP G L +++ G Q L +W V++
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 133
Query: 196 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVM 255
AKG+ +L D ++++RD A N+L+ + K++DFGLAK ++ + +
Sbjct: 134 ----AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 187
Query: 256 GTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 289
+ A E + T +SDV+S+GV + EL++
Sbjct: 188 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 129/287 (44%), Gaps = 41/287 (14%)
Query: 90 LGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLK-----PEGFQGHKEWLTEVNYLG 143
+G G FG VYKG W VAVK L P+ Q K EV L
Sbjct: 43 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFK---NEVGVLR 86
Query: 144 QLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGL 203
+ H N++ +GY + + +V ++ SL +HL + + +A A+G+
Sbjct: 87 KTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGM 144
Query: 204 TFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAP 263
+LH A+S +I+RD K++NI L + K+ DFGLA +H Q+ G+ + AP
Sbjct: 145 DYLH-AKS-IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 202
Query: 264 EYVATGR---LTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLF 320
E + + +SDVY+FG+VL EL++G+ +Q + + YLS
Sbjct: 203 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-NRDQIIFMVGRGYLSPDL--- 258
Query: 321 RIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 367
+K+ P+ A +CL + RP ++LA +E L
Sbjct: 259 ----SKVRSNCPKAMKRLMA----ECLKKKRDERPLFPQILASIELL 297
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 110/214 (51%), Gaps = 22/214 (10%)
Query: 83 NFRPDSLLGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLKPEGF-QGHKEWLTEVN 140
F+ +LG G FG VYKG WI P + VA+K+L+ + +KE L E
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 141 YLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRR----GPQPL-SWAVRMKV 195
+ + +P++ +L+G CL +L+ + MP G L +++ G Q L +W V++
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 128
Query: 196 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVM 255
AKG+ +L D ++++RD A N+L+ + K++DFG AK ++ + +
Sbjct: 129 ----AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 182
Query: 256 GTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 289
+ A E + T +SDV+S+GV + EL++
Sbjct: 183 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 131/302 (43%), Gaps = 48/302 (15%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH-KEWLTEVNYLGQL-HH 147
LGEG FG V + L KP VAVK LK + + + ++E+ + + H
Sbjct: 25 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 82
Query: 148 PNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVR--------------M 193
N++ L+G C + ++ E+ KG+L +L R P L ++ +
Sbjct: 83 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 142
Query: 194 KVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 253
A A+G+ +L A + I+RD A N+L+ + K++DFGLA+ D H+
Sbjct: 143 SCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYY 195
Query: 254 VMGTHG-----YAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW 308
T+G + APE + T +SDV+SFGV+L E+ + +G
Sbjct: 196 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT---------LG-------- 238
Query: 309 AKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 367
PY +LF+++ P + + C + P RP +++ L+R+
Sbjct: 239 GSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 298
Query: 368 EA 369
A
Sbjct: 299 VA 300
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 130/302 (43%), Gaps = 48/302 (15%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH-KEWLTEVNYLGQL-HH 147
LGEG FG V + L KP VAVK LK + + + ++E+ + + H
Sbjct: 21 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 78
Query: 148 PNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVR--------------M 193
N++ L+G C + ++ E+ KG+L +L R P L + +
Sbjct: 79 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 138
Query: 194 KVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 253
A A+G+ +L A + I+RD A N+L+ + K++DFGLA+ D H+
Sbjct: 139 SCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYY 191
Query: 254 VMGTHG-----YAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW 308
T+G + APE + T +SDV+SFGV+L E+ + +G
Sbjct: 192 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT---------LG-------- 234
Query: 309 AKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 367
PY +LF+++ P + + C + P RP +++ L+R+
Sbjct: 235 GSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 294
Query: 368 EA 369
A
Sbjct: 295 VA 296
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 131/302 (43%), Gaps = 48/302 (15%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH-KEWLTEVNYLGQL-HH 147
LGEG FG V + L KP VAVK LK + + + ++E+ + + H
Sbjct: 28 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 85
Query: 148 PNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVR--------------M 193
N++ L+G C + ++ E+ KG+L +L R P L ++ +
Sbjct: 86 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 145
Query: 194 KVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 253
A A+G+ +L A + I+RD A N+L+ + K++DFGLA+ D H+
Sbjct: 146 SCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYY 198
Query: 254 VMGTHG-----YAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW 308
T+G + APE + T +SDV+SFGV+L E+ + +G
Sbjct: 199 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT---------LG-------- 241
Query: 309 AKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 367
PY +LF+++ P + + C + P RP +++ L+R+
Sbjct: 242 GSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 301
Query: 368 EA 369
A
Sbjct: 302 VA 303
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 126/287 (43%), Gaps = 41/287 (14%)
Query: 90 LGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLK-----PEGFQGHKEWLTEVNYLG 143
+G G FG VYKG W VAVK L P+ Q K EV L
Sbjct: 18 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFK---NEVGVLR 61
Query: 144 QLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGL 203
+ H N++ +GY + + +V ++ SL +HL + + +A A+G+
Sbjct: 62 KTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGM 119
Query: 204 TFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAP 263
+LH +I+RD K++NI L + K+ DFGLA +H Q+ G+ + AP
Sbjct: 120 DYLH--AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 177
Query: 264 EYVATGR---LTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLF 320
E + + +SDVY+FG+VL EL++G+ +Q + + YLS
Sbjct: 178 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-NRDQIIFMVGRGYLSPDL--- 233
Query: 321 RIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 367
+K+ P+ A +CL + RP ++LA +E L
Sbjct: 234 ----SKVRSNCPKAMKRLMA----ECLKKKRDERPLFPQILASIELL 272
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 129/287 (44%), Gaps = 41/287 (14%)
Query: 90 LGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLK-----PEGFQGHKEWLTEVNYLG 143
+G G FG VYKG W VAVK L P+ Q K EV L
Sbjct: 44 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFK---NEVGVLR 87
Query: 144 QLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGL 203
+ H N++ +GY + + +V ++ SL +HL + + +A A+G+
Sbjct: 88 KTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGM 145
Query: 204 TFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAP 263
+LH A+S +I+RD K++NI L + K+ DFGLA +H Q+ G+ + AP
Sbjct: 146 DYLH-AKS-IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 203
Query: 264 EYVATGR---LTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLF 320
E + + +SDVY+FG+VL EL++G+ +Q + + YLS
Sbjct: 204 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-NRDQIIFMVGRGYLSPDL--- 259
Query: 321 RIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 367
+K+ P+ A +CL + RP ++LA +E L
Sbjct: 260 ----SKVRSNCPKAMKRLMA----ECLKKKRDERPLFPQILASIELL 298
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 110/214 (51%), Gaps = 22/214 (10%)
Query: 83 NFRPDSLLGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLKPEGF-QGHKEWLTEVN 140
F+ +LG G FG VYKG WI P + VA+K+L+ + +KE L E
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 76
Query: 141 YLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRR----GPQPL-SWAVRMKV 195
+ + +P++ +L+G CL +L+ + MP G L +++ G Q L +W V++
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 133
Query: 196 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVM 255
AKG+ +L D ++++RD A N+L+ + K++DFG AK ++ + +
Sbjct: 134 ----AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 187
Query: 256 GTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 289
+ A E + T +SDV+S+GV + EL++
Sbjct: 188 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 110/214 (51%), Gaps = 22/214 (10%)
Query: 83 NFRPDSLLGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLKPEGF-QGHKEWLTEVN 140
F+ +LG G FG VYKG WI P + VA+K+L+ + +KE L E
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 141 YLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRR----GPQPL-SWAVRMKV 195
+ + +P++ +L+G CL +L+ + MP G L +++ G Q L +W V++
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 126
Query: 196 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVM 255
AKG+ +L D ++++RD A N+L+ + K++DFG AK ++ + +
Sbjct: 127 ----AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 180
Query: 256 GTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 289
+ A E + T +SDV+S+GV + EL++
Sbjct: 181 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 131/302 (43%), Gaps = 48/302 (15%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH-KEWLTEVNYLGQL-HH 147
LGEG FG V + L KP VAVK LK + + + ++E+ + + H
Sbjct: 29 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 86
Query: 148 PNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVR--------------M 193
N++ L+G C + ++ E+ KG+L +L R P L ++ +
Sbjct: 87 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 146
Query: 194 KVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 253
A A+G+ +L A + I+RD A N+L+ + K++DFGLA+ D H+
Sbjct: 147 SCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYY 199
Query: 254 VMGTHG-----YAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW 308
T+G + APE + T +SDV+SFGV+L E+ + +G
Sbjct: 200 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT---------LG-------- 242
Query: 309 AKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 367
PY +LF+++ P + + C + P RP +++ L+R+
Sbjct: 243 GSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 302
Query: 368 EA 369
A
Sbjct: 303 VA 304
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 131/302 (43%), Gaps = 48/302 (15%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH-KEWLTEVNYLGQL-HH 147
LGEG FG V + L KP VAVK LK + + + ++E+ + + H
Sbjct: 36 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 148 PNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVR--------------M 193
N++ L+G C + ++ E+ KG+L +L R P L ++ +
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 194 KVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 253
A A+G+ +L A + I+RD A N+L+ + K++DFGLA+ D H+
Sbjct: 154 SCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYY 206
Query: 254 VMGTHG-----YAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW 308
T+G + APE + T +SDV+SFGV+L E+ + +G
Sbjct: 207 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT---------LG-------- 249
Query: 309 AKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 367
PY +LF+++ P + + C + P RP +++ L+R+
Sbjct: 250 GSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 309
Query: 368 EA 369
A
Sbjct: 310 VA 311
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 115/219 (52%), Gaps = 29/219 (13%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLK----PEGFQGHKEWLTE 138
NF+ +GEG +G VYK ++ L+ G VVA+ K++ EG + E
Sbjct: 4 NFQKVEKIGEGTYGVVYKA---RNKLT------GEVVALXKIRLDTETEGVPSTA--IRE 52
Query: 139 VNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMP---KGSLENHLFRRGPQPLSWAVRMK 194
++ L +L+HPN+VKL+ + EN+L LV+EF+ K ++ P PL + +
Sbjct: 53 ISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 195 VAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV 254
+ +GL F H +V++RD K N+L++ E KL+DFGLA+A RT+ T
Sbjct: 112 LL----QGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THE 163
Query: 255 MGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELLSGRC 292
+ T Y APE + + +T D++S G + E+++ R
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 115/219 (52%), Gaps = 29/219 (13%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLK----PEGFQGHKEWLTE 138
NF+ +GEG +G VYK ++ L+ G VVA+ K++ EG + E
Sbjct: 3 NFQKVEKIGEGTYGVVYKA---RNKLT------GEVVALXKIRLDTETEGVPSTA--IRE 51
Query: 139 VNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMP---KGSLENHLFRRGPQPLSWAVRMK 194
++ L +L+HPN+VKL+ + EN+L LV+EF+ K ++ P PL + +
Sbjct: 52 ISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 110
Query: 195 VAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV 254
+ +GL F H +V++RD K N+L++ E KL+DFGLA+A RT+ T
Sbjct: 111 LL----QGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THE 162
Query: 255 MGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELLSGRC 292
+ T Y APE + + +T D++S G + E+++ R
Sbjct: 163 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 131/302 (43%), Gaps = 48/302 (15%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH-KEWLTEVNYLGQL-HH 147
LGEG FG V + L KP VAVK LK + + + ++E+ + + H
Sbjct: 36 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 148 PNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVR--------------M 193
N++ L+G C + ++ E+ KG+L +L R P L ++ +
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 194 KVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 253
A A+G+ +L A + I+RD A N+L+ + K++DFGLA+ D H+
Sbjct: 154 SCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYY 206
Query: 254 VMGTHG-----YAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW 308
T+G + APE + T +SDV+SFGV+L E+ + +G
Sbjct: 207 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT---------LG-------- 249
Query: 309 AKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 367
PY +LF+++ P + + C + P RP +++ L+R+
Sbjct: 250 GSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 309
Query: 368 EA 369
A
Sbjct: 310 VA 311
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 134/315 (42%), Gaps = 49/315 (15%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH-KEWLTEVNYLGQL-HH 147
LGEG FG V + L KP VAVK LK + + + ++E+ + + H
Sbjct: 36 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 148 PNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVR--------------M 193
N++ L+G C + ++ E+ KG+L +L R P L + +
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 153
Query: 194 KVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 253
A A+G+ +L A + I+RD A N+L+ + K++DFGLA+ D H+
Sbjct: 154 SCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYY 206
Query: 254 VMGTHG-----YAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW 308
T+G + APE + T +SDV+SFGV+L E+ + +G
Sbjct: 207 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT---------LG-------- 249
Query: 309 AKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 367
PY +LF+++ P + + C + P RP +++ L+R+
Sbjct: 250 GSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 309
Query: 368 EA-PKNSAKLSQSEP 381
A N L S P
Sbjct: 310 VALTSNQEYLDLSMP 324
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 103/208 (49%), Gaps = 19/208 (9%)
Query: 87 DSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLH 146
D LG G FG V KG+ + + + + + + E L E N + QL
Sbjct: 16 DKELGSGNFGTVKKGY---YQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLD 70
Query: 147 HPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFL 206
+P +V++IG C E E+ +LV E G L +L + + + +++ + G+ +L
Sbjct: 71 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYL 127
Query: 207 HDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG-----YA 261
ES ++RD A N+LL + AK+SDFGL+KA D Q THG +
Sbjct: 128 E--ESNFVHRDLAARNVLLVTQHYAKISDFGLSKA-LRADENXYKAQ---THGKWPVKWY 181
Query: 262 APEYVATGRLTTKSDVYSFGVVLLELLS 289
APE + + ++KSDV+SFGV++ E S
Sbjct: 182 APECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 129/287 (44%), Gaps = 41/287 (14%)
Query: 90 LGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLK-----PEGFQGHKEWLTEVNYLG 143
+G G FG VYKG W VAVK L P+ Q K EV L
Sbjct: 36 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFK---NEVGVLR 79
Query: 144 QLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGL 203
+ H N++ +GY + + +V ++ SL +HL + + +A A+G+
Sbjct: 80 KTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGM 137
Query: 204 TFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAP 263
+LH A+S +I+RD K++NI L + K+ DFGLA +H Q+ G+ + AP
Sbjct: 138 DYLH-AKS-IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAP 195
Query: 264 EYVATGR---LTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLF 320
E + + +SDVY+FG+VL EL++G+ +Q + + YLS
Sbjct: 196 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-NRDQIIFMVGRGYLSPDL--- 251
Query: 321 RIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 367
+K+ P+ A +CL + RP ++LA +E L
Sbjct: 252 ----SKVRSNCPKAMKRLMA----ECLKKKRDERPLFPQILASIELL 290
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 129/287 (44%), Gaps = 41/287 (14%)
Query: 90 LGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLK-----PEGFQGHKEWLTEVNYLG 143
+G G FG VYKG W VAVK L P+ Q K EV L
Sbjct: 21 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFK---NEVGVLR 64
Query: 144 QLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGL 203
+ H N++ +GY + + +V ++ SL +HL + + +A A+G+
Sbjct: 65 KTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGM 122
Query: 204 TFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAP 263
+LH A+S +I+RD K++NI L + K+ DFGLA +H Q+ G+ + AP
Sbjct: 123 DYLH-AKS-IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 180
Query: 264 EYVATGR---LTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLF 320
E + + +SDVY+FG+VL EL++G+ +Q + + YLS
Sbjct: 181 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-NRDQIIFMVGRGYLSPDL--- 236
Query: 321 RIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 367
+K+ P+ A +CL + RP ++LA +E L
Sbjct: 237 ----SKVRSNCPKAMKRLMA----ECLKKKRDERPLFPQILASIELL 275
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 126/287 (43%), Gaps = 41/287 (14%)
Query: 90 LGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLK-----PEGFQGHKEWLTEVNYLG 143
+G G FG VYKG W VAVK L P+ Q K EV L
Sbjct: 21 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFK---NEVGVLR 64
Query: 144 QLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGL 203
+ H N++ +GY + + +V ++ SL +HL + + +A A+G+
Sbjct: 65 KTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGM 122
Query: 204 TFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAP 263
+LH +I+RD K++NI L + K+ DFGLA +H Q+ G+ + AP
Sbjct: 123 DYLH--AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 180
Query: 264 EYVATGR---LTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLF 320
E + + +SDVY+FG+VL EL++G+ +Q + + YLS
Sbjct: 181 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-NRDQIIFMVGRGYLSPDL--- 236
Query: 321 RIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 367
+K+ P+ A +CL + RP ++LA +E L
Sbjct: 237 ----SKVRSNCPKAMKRLMA----ECLKKKRDERPLFPQILASIELL 275
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 124/287 (43%), Gaps = 41/287 (14%)
Query: 90 LGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLK-----PEGFQGHKEWLTEVNYLG 143
+G G FG VYKG W VAVK L P+ Q K EV L
Sbjct: 16 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFK---NEVGVLR 59
Query: 144 QLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGL 203
+ H N++ +GY +V ++ SL +HL + + +A A+G+
Sbjct: 60 KTRHVNILLFMGYS-TAPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGM 117
Query: 204 TFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAP 263
+LH +I+RD K++NI L + K+ DFGLA +H Q+ G+ + AP
Sbjct: 118 DYLH--AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 175
Query: 264 EYVATGR---LTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLF 320
E + + +SDVY+FG+VL EL++G+ +Q + + YLS
Sbjct: 176 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-NRDQIIFMVGRGYLSPDL--- 231
Query: 321 RIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 367
+K+ P+ A +CL + RP ++LA +E L
Sbjct: 232 ----SKVRSNCPKAMKRLMA----ECLKKKRDERPLFPQILASIELL 270
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 129/287 (44%), Gaps = 41/287 (14%)
Query: 90 LGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLK-----PEGFQGHKEWLTEVNYLG 143
+G G FG VYKG W VAVK L P+ Q K EV L
Sbjct: 16 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFK---NEVGVLR 59
Query: 144 QLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGL 203
+ H N++ +GY + + +V ++ SL +HL + + +A A+G+
Sbjct: 60 KTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGM 117
Query: 204 TFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAP 263
+LH A+S +I+RD K++NI L + K+ DFGLA +H Q+ G+ + AP
Sbjct: 118 DYLH-AKS-IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 175
Query: 264 EYVATGR---LTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLF 320
E + + +SDVY+FG+VL EL++G+ +Q + + YLS
Sbjct: 176 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-NRDQIIFMVGRGYLSPDL--- 231
Query: 321 RIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 367
+K+ P+ A +CL + RP ++LA +E L
Sbjct: 232 ----SKVRSNCPKAMKRLMA----ECLKKKRDERPLFPQILASIELL 270
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 129/287 (44%), Gaps = 41/287 (14%)
Query: 90 LGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLK-----PEGFQGHKEWLTEVNYLG 143
+G G FG VYKG W VAVK L P+ Q K EV L
Sbjct: 44 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFK---NEVGVLR 87
Query: 144 QLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGL 203
+ H N++ +GY + + +V ++ SL +HL + + +A A+G+
Sbjct: 88 KTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGM 145
Query: 204 TFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAP 263
+LH A+S +I+RD K++NI L + K+ DFGLA +H Q+ G+ + AP
Sbjct: 146 DYLH-AKS-IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAP 203
Query: 264 EYVATGR---LTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLF 320
E + + +SDVY+FG+VL EL++G+ +Q + + YLS
Sbjct: 204 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-NRDQIIFMVGRGYLSPDL--- 259
Query: 321 RIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 367
+K+ P+ A +CL + RP ++LA +E L
Sbjct: 260 ----SKVRSNCPKAMKRLMA----ECLKKKRDERPLFPQILASIELL 298
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 100/211 (47%), Gaps = 29/211 (13%)
Query: 90 LGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLK-----PEGFQGHKEWLTEVNYLG 143
+G G FG VYKG W VAVK L P+ Q K EV L
Sbjct: 20 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFK---NEVGVLR 63
Query: 144 QLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGL 203
+ H N++ +GY + + +V ++ SL +HL + +A A+G+
Sbjct: 64 KTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHL-HASETKFEMKKLIDIARQTARGM 121
Query: 204 TFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAP 263
+LH +I+RD K++NI L + K+ DFGLA +H Q+ G+ + AP
Sbjct: 122 DYLH--AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 179
Query: 264 EYV---ATGRLTTKSDVYSFGVVLLELLSGR 291
E + + + +SDVY+FG+VL EL++G+
Sbjct: 180 EVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 210
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 129/287 (44%), Gaps = 41/287 (14%)
Query: 90 LGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLK-----PEGFQGHKEWLTEVNYLG 143
+G G FG VYKG W VAVK L P+ Q K EV L
Sbjct: 16 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFK---NEVGVLR 59
Query: 144 QLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGL 203
+ H N++ +GY + + +V ++ SL +HL + + +A A+G+
Sbjct: 60 KTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGM 117
Query: 204 TFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAP 263
+LH A+S +I+RD K++NI L + K+ DFGLA +H Q+ G+ + AP
Sbjct: 118 DYLH-AKS-IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAP 175
Query: 264 EYVATGR---LTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLF 320
E + + +SDVY+FG+VL EL++G+ +Q + + YLS
Sbjct: 176 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-NRDQIIFMVGRGYLSPDL--- 231
Query: 321 RIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 367
+K+ P+ A +CL + RP ++LA +E L
Sbjct: 232 ----SKVRSNCPKAMKRLMA----ECLKKKRDERPLFPQILASIELL 270
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 131/302 (43%), Gaps = 48/302 (15%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH-KEWLTEVNYLGQL-HH 147
LGEG FG V + L KP VAVK LK + + + ++E+ + + H
Sbjct: 77 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 134
Query: 148 PNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVR--------------M 193
N++ L+G C + ++ E+ KG+L +L R P L ++ +
Sbjct: 135 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 194
Query: 194 KVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 253
A A+G+ +L A + I+RD A N+L+ + K++DFGLA+ D H+
Sbjct: 195 SCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYY 247
Query: 254 VMGTHG-----YAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW 308
T+G + APE + T +SDV+SFGV+L E+ + +G
Sbjct: 248 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT---------LG-------- 290
Query: 309 AKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 367
PY +LF+++ P + + C + P RP +++ L+R+
Sbjct: 291 GSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 350
Query: 368 EA 369
A
Sbjct: 351 VA 352
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 119/288 (41%), Gaps = 44/288 (15%)
Query: 80 ATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVK---KLKPEGFQGHKEWL 136
A +F LG+G FG VY Q S ++A+K K + E +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQ---------SKFILALKVLFKAQLEKAGVEHQLR 82
Query: 137 TEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA 196
EV L HPN+++L GY + L+ E+ P G++ L Q LS + A
Sbjct: 83 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTA 137
Query: 197 I---GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 253
A L++ H +VI+RD K N+LL + K++DFG + P+ R T
Sbjct: 138 TYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TT 191
Query: 254 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYL 313
+ GT Y PE + K D++S GV+ E L G+ + A Y
Sbjct: 192 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQ 238
Query: 314 SDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 361
+++ R+ T +P A L + L + P RP + EVL
Sbjct: 239 ETYKRISRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 281
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 120/279 (43%), Gaps = 46/279 (16%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLT-EVNYLGQLHHP 148
+G+G FG VYKG ID H+ VVA+K + E + E + E+ L Q P
Sbjct: 27 IGKGSFGEVYKG-IDNHTKE--------VVAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 77
Query: 149 NLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHD 208
+ + G L+ ++ E++ GS + L P PL + KGL +LH
Sbjct: 78 YITRYFGSYLKSTKLWIIMEYLGGGSALDLL---KPGPLEETYIATILREILKGLDYLHS 134
Query: 209 AESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVAT 268
I+RD KA+N+LL + + KL+DFG+ AG D +GT + APE +
Sbjct: 135 ERK--IHRDIKAANVLLSEQGDVKLADFGV--AGQLTDTQIKRNXFVGTPFWMAPEVIKQ 190
Query: 269 GRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSD---KRKLFRIMDT 325
K+D++S G+ +EL G +P SD R LF I
Sbjct: 191 SAYDFKADIWSLGITAIELAKG-------------------EPPNSDLHPMRVLFLIPKN 231
Query: 326 K---LGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 361
L GQ+ + CLN +P+ RP E+L
Sbjct: 232 SPPTLEGQHSKPFKEFVEA----CLNKDPRFRPTAKELL 266
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 127/300 (42%), Gaps = 41/300 (13%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTE---- 138
N + LG G FG V ++ + K + + VAVK LK KE L
Sbjct: 47 NLQFGKTLGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 139 VNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPL----SWAVR-- 192
+++LGQ H N+V L+G C G L++ E+ G L N L RR + L ++A+
Sbjct: 103 MSHLGQ--HENIVNLLGACTHGGPVLVITEYCCYGDLLNFL-RRKSRVLETDPAFAIANS 159
Query: 193 -------MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 245
+ + A+G+ FL A I+RD A N+LL AK+ DFGLA+
Sbjct: 160 TASTRDLLHFSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND 217
Query: 246 DRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSL 305
V + APE + T +SDV+S+G++L E+ S +G+
Sbjct: 218 SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS---------LGLN--- 265
Query: 306 VDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILE 365
P + K ++++ P A ++ C EP RP ++ + L+
Sbjct: 266 ---PYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 322
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 83/160 (51%), Gaps = 7/160 (4%)
Query: 133 KEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVR 192
K + EV+ QL H N+V +I E + LV E++ +L ++ GP + A+
Sbjct: 56 KRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAIN 115
Query: 193 MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVST 252
I G+ HD ++++RD K NIL+D+ K+ DFG+AKA T +
Sbjct: 116 FTNQI--LDGIKHAHDM--RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQ-TN 170
Query: 253 QVMGTHGYAAPEYVATGRLTTK-SDVYSFGVVLLELLSGR 291
V+GT Y +PE A G T + +D+YS G+VL E+L G
Sbjct: 171 HVLGTVQYFSPEQ-AKGEATDECTDIYSIGIVLYEMLVGE 209
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 119/288 (41%), Gaps = 44/288 (15%)
Query: 80 ATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVK---KLKPEGFQGHKEWL 136
A +F LG+G FG VY Q S ++A+K K + E +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQ---------SKFILALKVLFKAQLEKAGVEHQLR 61
Query: 137 TEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA 196
EV L HPN+++L GY + L+ E+ P+G + L Q LS + A
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL-----QKLSKFDEQRTA 116
Query: 197 IGA---AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 253
A L++ H +VI+RD K N+LL + K++DFG + P+ R T
Sbjct: 117 TYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TT 170
Query: 254 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYL 313
+ GT Y PE + K D++S GV+ E L G+ + A Y
Sbjct: 171 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQ 217
Query: 314 SDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 361
+++ R+ T +P A L + L + P RP + EVL
Sbjct: 218 ETYKRISRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 260
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 100/211 (47%), Gaps = 29/211 (13%)
Query: 90 LGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLK-----PEGFQGHKEWLTEVNYLG 143
+G G FG VYKG W VAVK L P+ Q K EV L
Sbjct: 32 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFK---NEVGVLR 75
Query: 144 QLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGL 203
+ H N++ +GY + + +V ++ SL +HL + +A A+G+
Sbjct: 76 KTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHL-HASETKFEMKKLIDIARQTARGM 133
Query: 204 TFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAP 263
+LH +I+RD K++NI L + K+ DFGLA +H Q+ G+ + AP
Sbjct: 134 DYLH--AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAP 191
Query: 264 EYV---ATGRLTTKSDVYSFGVVLLELLSGR 291
E + + + +SDVY+FG+VL EL++G+
Sbjct: 192 EVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 132/313 (42%), Gaps = 39/313 (12%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH-KEWLTEVNYLGQL-HH 147
LGEG FG V + + KP + VAVK LK + + + ++E+ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 148 PNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMK------------- 194
N++ L+G C + ++ E+ KG+L +L R P + ++ +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 195 -VAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 253
A+G+ +L A + I+RD A N+L+ K++DFGLA+ D +T
Sbjct: 161 SCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTN 218
Query: 254 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYL 313
+ APE + T +SDV+SFGV++ E+ + +G PY
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT---------LG--------GSPYP 261
Query: 314 S-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILER-LEAPK 371
+LF+++ P + + C + P RP +++ L+R L
Sbjct: 262 GIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 321
Query: 372 NSAKLSQSEPHRQ 384
N L S+P Q
Sbjct: 322 NEEYLDLSQPLEQ 334
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 109/210 (51%), Gaps = 29/210 (13%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLK----PEGFQGHKEWLTEVNYLGQL 145
+GEG +G VYK AK G +VA+K+++ EG + E++ L +L
Sbjct: 29 VGEGTYGVVYK----------AKDSQGRIVALKRIRLDAEDEGIPSTA--IREISLLKEL 76
Query: 146 HHPNLVKLIGYCLEGENRLLVYEFMPKG---SLENHLFRRGPQPLSWAVRMKVAIGAAKG 202
HHPN+V LI LV+EFM K L+ + + G Q + + + +G
Sbjct: 77 HHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDEN--KTGLQDSQIKIYLYQLL---RG 131
Query: 203 LTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAA 262
+ H + ++++RD K N+L++++ KL+DFGLA+A R++ T + T Y A
Sbjct: 132 VAHCH--QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY--THEVVTLWYRA 187
Query: 263 PEYV-ATGRLTTKSDVYSFGVVLLELLSGR 291
P+ + + + +T D++S G + E+++G+
Sbjct: 188 PDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 128/307 (41%), Gaps = 47/307 (15%)
Query: 80 ATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVK---KLKPEGFQGHKEWL 136
A +F LG+G FG VY Q S ++A+K K + E +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQ---------SKFILALKVLFKAQLEKAGVEHQLR 57
Query: 137 TEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA 196
EV L HPN+++L GY + L+ E+ P G++ L Q LS + A
Sbjct: 58 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTA 112
Query: 197 IGA---AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 253
A L++ H +VI+RD K N+LL + K++DFG + P+ RT +S
Sbjct: 113 TYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLS-- 168
Query: 254 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYL 313
GT Y PE + K D++S GV+ E L G+ + A Y
Sbjct: 169 --GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQ 213
Query: 314 SDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEAPKNS 373
+++ R+ T +P A L + L + P RP + EV LE NS
Sbjct: 214 ETYKRISRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREV---LEHPWITANS 265
Query: 374 AKLSQSE 380
+K S S+
Sbjct: 266 SKPSNSQ 272
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 120/288 (41%), Gaps = 44/288 (15%)
Query: 80 ATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVK---KLKPEGFQGHKEWL 136
A +F LG+G FG VY Q S ++A+K K + E +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQ---------SKFILALKVLFKAQLEKAGVEHQLR 56
Query: 137 TEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA 196
EV L HPN+++L GY + L+ E+ P G++ L Q LS + A
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTA 111
Query: 197 IGA---AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 253
A L++ H +VI+RD K N+LL + K++DFG + P+ R T+
Sbjct: 112 TYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TE 165
Query: 254 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYL 313
+ GT Y PE + K D++S GV+ E L G+ + A Y
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQ 212
Query: 314 SDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 361
+++ R+ T +P A L + L + P RP + EVL
Sbjct: 213 ETYKRISRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 109/210 (51%), Gaps = 29/210 (13%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLK----PEGFQGHKEWLTEVNYLGQL 145
+GEG +G VYK AK G +VA+K+++ EG + E++ L +L
Sbjct: 29 VGEGTYGVVYK----------AKDSQGRIVALKRIRLDAEDEGIPSTA--IREISLLKEL 76
Query: 146 HHPNLVKLIGYCLEGENRLLVYEFMPKG---SLENHLFRRGPQPLSWAVRMKVAIGAAKG 202
HHPN+V LI LV+EFM K L+ + + G Q + + + +G
Sbjct: 77 HHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDEN--KTGLQDSQIKIYLYQLL---RG 131
Query: 203 LTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAA 262
+ H + ++++RD K N+L++++ KL+DFGLA+A R++ T + T Y A
Sbjct: 132 VAHCH--QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY--THEVVTLWYRA 187
Query: 263 PEYV-ATGRLTTKSDVYSFGVVLLELLSGR 291
P+ + + + +T D++S G + E+++G+
Sbjct: 188 PDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 133/313 (42%), Gaps = 39/313 (12%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH-KEWLTEVNYLGQL-HH 147
LGEG FG V + + KP + VAVK LK + + + ++E+ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 148 PNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGP--------------QPLSWAVRM 193
N++ L+G C + ++ E+ KG+L +L R P + +++ +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLV 160
Query: 194 KVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 253
A+G+ +L A + I+RD A N+L+ K++DFGLA+ D +T
Sbjct: 161 SCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTN 218
Query: 254 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYL 313
+ APE + T +SDV+SFGV++ E+ + +G PY
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT---------LG--------GSPYP 261
Query: 314 S-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILER-LEAPK 371
+LF+++ P + + C + P RP +++ L+R L
Sbjct: 262 GIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 321
Query: 372 NSAKLSQSEPHRQ 384
N L S+P Q
Sbjct: 322 NEEYLDLSQPLEQ 334
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 120/243 (49%), Gaps = 23/243 (9%)
Query: 118 VVAVKKLKPEGFQGHKE--WL-TEVNYLGQL-HHPNLVKLIGYCLEGENRLL-VYEFMPK 172
+ A+K +K E ++ W+ TE + Q +HP LV L C + E+RL V E++
Sbjct: 47 IYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHS-CFQTESRLFFVIEYVNG 105
Query: 173 GSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAK 232
G L H+ R+ P A I A L +LH E +IYRD K N+LLD+E + K
Sbjct: 106 GDLMFHMQRQRKLPEEHARFYSAEISLA--LNYLH--ERGIIYRDLKLDNVLLDSEGHIK 161
Query: 233 LSDFGLAKAGPT-GDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 291
L+D+G+ K G GD T + GT Y APE + D ++ GV++ E+++GR
Sbjct: 162 LTDYGMCKEGLRPGDTT---SXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 218
Query: 292 CAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEP 351
D VG + P + + LF+++ K + P+ + AA++ LN +P
Sbjct: 219 SPFD--IVGSSDN------PDQNTEDYLFQVILEK-QIRIPRSMSVKAASVLKSFLNKDP 269
Query: 352 KLR 354
K R
Sbjct: 270 KER 272
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 98/211 (46%), Gaps = 29/211 (13%)
Query: 90 LGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLK-----PEGFQGHKEWLTEVNYLG 143
+G G FG VYKG W VAVK L P+ Q K EV L
Sbjct: 32 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFK---NEVGVLR 75
Query: 144 QLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGL 203
+ H N++ +GY +V ++ SL +HL + +A A+G+
Sbjct: 76 KTRHVNILLFMGYS-TAPQLAIVTQWCEGSSLYHHL-HASETKFEMKKLIDIARQTARGM 133
Query: 204 TFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAP 263
+LH +I+RD K++NI L + K+ DFGLA +H Q+ G+ + AP
Sbjct: 134 DYLH--AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAP 191
Query: 264 EYV---ATGRLTTKSDVYSFGVVLLELLSGR 291
E + + + +SDVY+FG+VL EL++G+
Sbjct: 192 EVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 115/219 (52%), Gaps = 29/219 (13%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLK----PEGFQGHKEWLTE 138
NF+ +GEG +G VYK ++ L+ G VVA+KK++ EG + E
Sbjct: 3 NFQKVEKIGEGTYGVVYKA---RNKLT------GEVVALKKIRLDTETEGVPSTA--IRE 51
Query: 139 VNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMP---KGSLENHLFRRGPQPLSWAVRMK 194
++ L +L+HPN+VKL+ + EN+L LV+E + K ++ P PL + +
Sbjct: 52 ISLLKELNHPNIVKLLD-VIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQ 110
Query: 195 VAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV 254
+ +GL F H +V++RD K N+L++ E KL+DFGLA+A RT+ T
Sbjct: 111 LL----QGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THE 162
Query: 255 MGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELLSGRC 292
+ T Y APE + + +T D++S G + E+++ R
Sbjct: 163 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 111/219 (50%), Gaps = 20/219 (9%)
Query: 79 TATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH-KEWLT 137
+++ F+ LG G + VYKG +G+ VA+K++K + +G +
Sbjct: 2 SSSSQFKQLEKLGNGTYATVYKG---------LNKTTGVYVALKEVKLDSEEGTPSTAIR 52
Query: 138 EVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMP---KGSLENHLFRRGPQPLSWAVRM 193
E++ + +L H N+V+L + EN+L LV+EFM K +++ P+ L +
Sbjct: 53 EISLMKELKHENIVRLYD-VIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVK 111
Query: 194 KVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 253
+GL F H E+++++RD K N+L++ KL DFGLA+A T S
Sbjct: 112 YFQWQLLQGLAFCH--ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEV 169
Query: 254 VMGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELLSGR 291
V T Y AP+ + R +T D++S G +L E+++G+
Sbjct: 170 V--TLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 119/288 (41%), Gaps = 44/288 (15%)
Query: 80 ATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVK---KLKPEGFQGHKEWL 136
A +F LG+G FG VY Q S ++A+K K + E +
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQ---------SKFILALKVLFKAQLEKAGVEHQLR 73
Query: 137 TEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA 196
EV L HPN+++L GY + L+ E+ P G++ L Q LS + A
Sbjct: 74 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTA 128
Query: 197 I---GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 253
A L++ H +VI+RD K N+LL + K++DFG + P+ R T
Sbjct: 129 TYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TT 182
Query: 254 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYL 313
+ GT Y PE + K D++S GV+ E L G+ + A Y
Sbjct: 183 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQ 229
Query: 314 SDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 361
+++ R+ T +P A L + L + P RP + EVL
Sbjct: 230 ETYKRISRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 272
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 107/214 (50%), Gaps = 22/214 (10%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLT--EVN 140
+F +LG+G FG V+ +P SG + A+K LK + T E +
Sbjct: 29 HFELLKVLGQGSFGKVFL------VRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERD 82
Query: 141 YLGQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRGPQPLSWA---VRMKVA 196
L ++HP +VKL Y + E +L L+ +F+ G L F R + + + V+ +A
Sbjct: 83 ILADVNHPFVVKL-HYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFYLA 137
Query: 197 IGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMG 256
A GL LH +IYRD K NILLD E + KL+DFGL+K ++ S G
Sbjct: 138 -ELALGLDHLHSL--GIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYS--FCG 192
Query: 257 THGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
T Y APE V + +D +S+GV++ E+L+G
Sbjct: 193 TVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 115/222 (51%), Gaps = 29/222 (13%)
Query: 80 ATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLK----PEGFQGHKEW 135
+ NF+ +GEG +G VYK ++ L+ G VVA+KK++ EG
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---RNKLT------GEVVALKKIRLDTETEGVPSTA-- 52
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMP---KGSLENHLFRRGPQPLSWAV 191
+ E++ L +L+HPN+VKL+ + EN+L LV+E + K ++ P PL +
Sbjct: 53 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSY 111
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
++ +GL F H +V++RD K N+L++ E KL+DFGLA+A RT+
Sbjct: 112 LFQLL----QGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 165
Query: 252 TQVMGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELLSGRC 292
V T Y APE + + +T D++S G + E+++ R
Sbjct: 166 EVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 120/243 (49%), Gaps = 23/243 (9%)
Query: 118 VVAVKKLKPEGFQGHKE--WL-TEVNYLGQL-HHPNLVKLIGYCLEGENRLL-VYEFMPK 172
+ A+K +K E ++ W+ TE + Q +HP LV L C + E+RL V E++
Sbjct: 32 IYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHS-CFQTESRLFFVIEYVNG 90
Query: 173 GSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAK 232
G L H+ R+ P A I A L +LH E +IYRD K N+LLD+E + K
Sbjct: 91 GDLMFHMQRQRKLPEEHARFYSAEISLA--LNYLH--ERGIIYRDLKLDNVLLDSEGHIK 146
Query: 233 LSDFGLAKAGPT-GDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 291
L+D+G+ K G GD T + GT Y APE + D ++ GV++ E+++GR
Sbjct: 147 LTDYGMCKEGLRPGDTT---SXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 203
Query: 292 CAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEP 351
D VG + P + + LF+++ K + P+ + AA++ LN +P
Sbjct: 204 SPFD--IVGSSDN------PDQNTEDYLFQVILEK-QIRIPRSLSVKAASVLKSFLNKDP 254
Query: 352 KLR 354
K R
Sbjct: 255 KER 257
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 120/243 (49%), Gaps = 23/243 (9%)
Query: 118 VVAVKKLKPEGFQGHKE--WL-TEVNYLGQL-HHPNLVKLIGYCLEGENRLL-VYEFMPK 172
+ A+K +K E ++ W+ TE + Q +HP LV L C + E+RL V E++
Sbjct: 36 IYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHS-CFQTESRLFFVIEYVNG 94
Query: 173 GSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAK 232
G L H+ R+ P A I A L +LH E +IYRD K N+LLD+E + K
Sbjct: 95 GDLMFHMQRQRKLPEEHARFYSAEISLA--LNYLH--ERGIIYRDLKLDNVLLDSEGHIK 150
Query: 233 LSDFGLAKAGPT-GDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 291
L+D+G+ K G GD T + GT Y APE + D ++ GV++ E+++GR
Sbjct: 151 LTDYGMCKEGLRPGDTT---SXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 207
Query: 292 CAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEP 351
D VG + P + + LF+++ K + P+ + AA++ LN +P
Sbjct: 208 SPFD--IVGSSDN------PDQNTEDYLFQVILEK-QIRIPRSLSVKAASVLKSFLNKDP 258
Query: 352 KLR 354
K R
Sbjct: 259 KER 261
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 105/211 (49%), Gaps = 19/211 (9%)
Query: 146 HHPNLVKLIGYCLEGENRLL-VYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLT 204
+HP LV L C + E+RL V E++ G L H+ R+ P A I A L
Sbjct: 111 NHPFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA--LN 167
Query: 205 FLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPT-GDRTHVSTQVMGTHGYAAP 263
+LH E +IYRD K N+LLD+E + KL+D+G+ K G GD T + GT Y AP
Sbjct: 168 YLH--ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---STFCGTPNYIAP 222
Query: 264 EYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIM 323
E + D ++ GV++ E+++GR D VG + P + + LF+++
Sbjct: 223 EILRGEDYGFSVDWWALGVLMFEMMAGRSPFD--IVGSSDN------PDQNTEDYLFQVI 274
Query: 324 DTKLGGQYPQKAAHTAATLALQCLNNEPKLR 354
K + P+ + AA++ LN +PK R
Sbjct: 275 LEK-QIRIPRSLSVKAASVLKSFLNKDPKER 304
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 103/215 (47%), Gaps = 22/215 (10%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHK---EWLTEVNYLGQLH 146
LG G FG V G +H L+ G VAVK L + + + E+ L
Sbjct: 24 LGVGTFGKVKVG---KHELT------GHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFR 74
Query: 147 HPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFL 206
HP+++KL + +V E++ G L +++ + G + R+ I + G+ +
Sbjct: 75 HPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILS--GVDYC 132
Query: 207 HDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYV 266
H V++RD K N+LLDA NAK++DFGL+ G+ S G+ YAAPE V
Sbjct: 133 H--RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSC---GSPNYAAPE-V 186
Query: 267 ATGRLTT--KSDVYSFGVVLLELLSGRCAVDKTKV 299
+GRL + D++S GV+L LL G D V
Sbjct: 187 ISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHV 221
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 119/288 (41%), Gaps = 44/288 (15%)
Query: 80 ATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVK---KLKPEGFQGHKEWL 136
A +F LG+G FG VY Q S ++A+K K + E +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQ---------SKFILALKVLFKAQLEKAGVEHQLR 61
Query: 137 TEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA 196
EV L HPN+++L GY + L+ E+ P G++ L Q LS + A
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTA 116
Query: 197 IGA---AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 253
A L++ H +VI+RD K N+LL + K++DFG + P+ R T
Sbjct: 117 TYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TT 170
Query: 254 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYL 313
+ GT Y PE + K D++S GV+ E L G+ + A Y
Sbjct: 171 LCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQ 217
Query: 314 SDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 361
+++ R+ T +P A L + L + P RP + EVL
Sbjct: 218 ETYKRISRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPXLREVL 260
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 101/208 (48%), Gaps = 15/208 (7%)
Query: 88 SLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH-KEWLTEVNYLGQLH 146
S +GEG +G V + + + + VA+KK+ P Q + + L E+ L +
Sbjct: 29 SYIGEGAYGMVCSAYDNVNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFR 79
Query: 147 HPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRR-GPQPLSWAVRMKVAIGAAKGLTF 205
H N++ + + ++ + +E L++ Q LS +GL +
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKY 139
Query: 206 LHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTHGYAAPE 264
+H A V++RD K SN+LL+ + K+ DFGLA+ A P D T T+ + T Y APE
Sbjct: 140 IHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
Query: 265 YVATGRLTTKS-DVYSFGVVLLELLSGR 291
+ + TKS D++S G +L E+LS R
Sbjct: 198 IMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 101/208 (48%), Gaps = 15/208 (7%)
Query: 88 SLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH-KEWLTEVNYLGQLH 146
S +GEG +G V + + + + VA+KK+ P Q + + L E+ L +
Sbjct: 34 SYIGEGAYGMVCSAYDNLNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFR 84
Query: 147 HPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRR-GPQPLSWAVRMKVAIGAAKGLTF 205
H N++ + + ++ + +E L++ Q LS +GL +
Sbjct: 85 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKY 144
Query: 206 LHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTHGYAAPE 264
+H A V++RD K SN+LL+ + K+ DFGLA+ A P D T T+ + T Y APE
Sbjct: 145 IHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 202
Query: 265 YVATGRLTTKS-DVYSFGVVLLELLSGR 291
+ + TKS D++S G +L E+LS R
Sbjct: 203 IMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 101/208 (48%), Gaps = 15/208 (7%)
Query: 88 SLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH-KEWLTEVNYLGQLH 146
S +GEG +G V + + + + VA+KK+ P Q + + L E+ L +
Sbjct: 35 SYIGEGAYGMVCSAYDNLNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFR 85
Query: 147 HPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRR-GPQPLSWAVRMKVAIGAAKGLTF 205
H N++ + + ++ + +E L++ Q LS +GL +
Sbjct: 86 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKY 145
Query: 206 LHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTHGYAAPE 264
+H A V++RD K SN+LL+ + K+ DFGLA+ A P D T T+ + T Y APE
Sbjct: 146 IHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 203
Query: 265 YVATGRLTTKS-DVYSFGVVLLELLSGR 291
+ + TKS D++S G +L E+LS R
Sbjct: 204 IMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 101/208 (48%), Gaps = 15/208 (7%)
Query: 88 SLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH-KEWLTEVNYLGQLH 146
S +GEG +G V + + + + VA+KK+ P Q + + L E+ L +
Sbjct: 26 SYIGEGAYGMVCSAYDNLNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFR 76
Query: 147 HPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRR-GPQPLSWAVRMKVAIGAAKGLTF 205
H N++ + + ++ + +E L++ Q LS +GL +
Sbjct: 77 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKY 136
Query: 206 LHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTHGYAAPE 264
+H A V++RD K SN+LL+ + K+ DFGLA+ A P D T T+ + T Y APE
Sbjct: 137 IHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 194
Query: 265 YVATGRLTTKS-DVYSFGVVLLELLSGR 291
+ + TKS D++S G +L E+LS R
Sbjct: 195 IMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 101/208 (48%), Gaps = 15/208 (7%)
Query: 88 SLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH-KEWLTEVNYLGQLH 146
S +GEG +G V + + + + VA+KK+ P Q + + L E+ L +
Sbjct: 33 SYIGEGAYGMVCSAYDNLNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFR 83
Query: 147 HPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRR-GPQPLSWAVRMKVAIGAAKGLTF 205
H N++ + + ++ + +E L++ Q LS +GL +
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKY 143
Query: 206 LHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTHGYAAPE 264
+H A V++RD K SN+LL+ + K+ DFGLA+ A P D T T+ + T Y APE
Sbjct: 144 IHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 201
Query: 265 YVATGRLTTKS-DVYSFGVVLLELLSGR 291
+ + TKS D++S G +L E+LS R
Sbjct: 202 IMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 101/208 (48%), Gaps = 15/208 (7%)
Query: 88 SLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH-KEWLTEVNYLGQLH 146
S +GEG +G V + + + + VA+KK+ P Q + + L E+ L +
Sbjct: 27 SYIGEGAYGMVCSAYDNLNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFR 77
Query: 147 HPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRR-GPQPLSWAVRMKVAIGAAKGLTF 205
H N++ + + ++ + +E L++ Q LS +GL +
Sbjct: 78 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKY 137
Query: 206 LHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTHGYAAPE 264
+H A V++RD K SN+LL+ + K+ DFGLA+ A P D T T+ + T Y APE
Sbjct: 138 IHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 195
Query: 265 YVATGRLTTKS-DVYSFGVVLLELLSGR 291
+ + TKS D++S G +L E+LS R
Sbjct: 196 IMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 101/208 (48%), Gaps = 15/208 (7%)
Query: 88 SLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH-KEWLTEVNYLGQLH 146
S +GEG +G V + + + + VA+KK+ P Q + + L E+ L +
Sbjct: 37 SYIGEGAYGMVCSAYDNVNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFR 87
Query: 147 HPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRR-GPQPLSWAVRMKVAIGAAKGLTF 205
H N++ + + ++ + +E L++ Q LS +GL +
Sbjct: 88 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKY 147
Query: 206 LHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTHGYAAPE 264
+H A V++RD K SN+LL+ + K+ DFGLA+ A P D T T+ + T Y APE
Sbjct: 148 IHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 205
Query: 265 YVATGRLTTKS-DVYSFGVVLLELLSGR 291
+ + TKS D++S G +L E+LS R
Sbjct: 206 IMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 101/208 (48%), Gaps = 15/208 (7%)
Query: 88 SLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH-KEWLTEVNYLGQLH 146
S +GEG +G V + + + + VA+KK+ P Q + + L E+ L +
Sbjct: 29 SYIGEGAYGMVCSAYDNVNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFR 79
Query: 147 HPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRR-GPQPLSWAVRMKVAIGAAKGLTF 205
H N++ + + ++ + +E L++ Q LS +GL +
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKY 139
Query: 206 LHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTHGYAAPE 264
+H A V++RD K SN+LL+ + K+ DFGLA+ A P D T T+ + T Y APE
Sbjct: 140 IHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
Query: 265 YVATGRLTTKS-DVYSFGVVLLELLSGR 291
+ + TKS D++S G +L E+LS R
Sbjct: 198 IMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 101/208 (48%), Gaps = 15/208 (7%)
Query: 88 SLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH-KEWLTEVNYLGQLH 146
S +GEG +G V + + + + VA+KK+ P Q + + L E+ L +
Sbjct: 29 SYIGEGAYGMVCSAYDNVNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFR 79
Query: 147 HPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRR-GPQPLSWAVRMKVAIGAAKGLTF 205
H N++ + + ++ + +E L++ Q LS +GL +
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKY 139
Query: 206 LHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTHGYAAPE 264
+H A V++RD K SN+LL+ + K+ DFGLA+ A P D T T+ + T Y APE
Sbjct: 140 IHSA--NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
Query: 265 YVATGRLTTKS-DVYSFGVVLLELLSGR 291
+ + TKS D++S G +L E+LS R
Sbjct: 198 IMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 101/208 (48%), Gaps = 15/208 (7%)
Query: 88 SLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH-KEWLTEVNYLGQLH 146
S +GEG +G V + + + + VA+KK+ P Q + + L E+ L +
Sbjct: 33 SYIGEGAYGMVCSAYDNLNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFR 83
Query: 147 HPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRR-GPQPLSWAVRMKVAIGAAKGLTF 205
H N++ + + ++ + +E L++ Q LS +GL +
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKY 143
Query: 206 LHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTHGYAAPE 264
+H A V++RD K SN+LL+ + K+ DFGLA+ A P D T T+ + T Y APE
Sbjct: 144 IHSA--NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 201
Query: 265 YVATGRLTTKS-DVYSFGVVLLELLSGR 291
+ + TKS D++S G +L E+LS R
Sbjct: 202 IMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 119/288 (41%), Gaps = 44/288 (15%)
Query: 80 ATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVK---KLKPEGFQGHKEWL 136
A +F LG+G FG VY Q S ++A+K K + E +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQ---------SKFILALKVLFKAQLEKAGVEHQLR 57
Query: 137 TEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA 196
EV L HPN+++L GY + L+ E+ P G++ L Q LS + A
Sbjct: 58 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTA 112
Query: 197 IGA---AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 253
A L++ H +VI+RD K N+LL + K++DFG + P+ R T
Sbjct: 113 TYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TD 166
Query: 254 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYL 313
+ GT Y PE + K D++S GV+ E L G+ + A Y
Sbjct: 167 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQ 213
Query: 314 SDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 361
+++ R+ T +P A L + L + P RP + EVL
Sbjct: 214 ETYKRISRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 256
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 126/299 (42%), Gaps = 58/299 (19%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYL 142
+F+ L+G GGFG V+K +H + G +K++K + +E V L
Sbjct: 12 DFKEIELIGSGGFGQVFKA---KHRID------GKTYVIKRVKYNNEKAERE----VKAL 58
Query: 143 GQLHHPNLVKLIGYCLEGENR-----------------LLVYEFMPKGSLENHLFRRGPQ 185
+L H N+V G C +G + + EF KG+LE + +R +
Sbjct: 59 AKLDHVNIVHYNG-CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE 117
Query: 186 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 245
L + +++ KG+ ++H ++I RD K SNI L K+ DFGL +
Sbjct: 118 KLDKVLALELFEQITKGVDYIH--SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKND 175
Query: 246 DRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSL 305
+ S GT Y +PE +++ + D+Y+ G++L ELL V T +
Sbjct: 176 GKRXRSK---GTLRYMSPEQISSQDYGKEVDLYALGLILAELLH----VCDTAFETSKFF 228
Query: 306 VDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAIL 364
D +SD I D K TL + L+ +P+ RP SE+L L
Sbjct: 229 TDLRDGIISD------IFDKK------------EKTLLQKLLSKKPEDRPNTSEILRTL 269
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 101/208 (48%), Gaps = 15/208 (7%)
Query: 88 SLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKE-WLTEVNYLGQLH 146
S +GEG +G V + + + + VA+KK+ P Q + + L E+ L +
Sbjct: 33 SYIGEGAYGMVCSAYDNLNKVR---------VAIKKISPFEHQTYXQRTLREIKILLRFR 83
Query: 147 HPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRR-GPQPLSWAVRMKVAIGAAKGLTF 205
H N++ + + ++ + +E L++ Q LS +GL +
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKY 143
Query: 206 LHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTHGYAAPE 264
+H A V++RD K SN+LL+ + K+ DFGLA+ A P D T T+ + T Y APE
Sbjct: 144 IHSA--NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 201
Query: 265 YVATGRLTTKS-DVYSFGVVLLELLSGR 291
+ + TKS D++S G +L E+LS R
Sbjct: 202 IMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 101/208 (48%), Gaps = 15/208 (7%)
Query: 88 SLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH-KEWLTEVNYLGQLH 146
S +GEG +G V + + + + VA+KK+ P Q + + L E+ L +
Sbjct: 29 SYIGEGAYGMVCSAYDNVNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFR 79
Query: 147 HPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRR-GPQPLSWAVRMKVAIGAAKGLTF 205
H N++ + + ++ + +E L++ Q LS +GL +
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKY 139
Query: 206 LHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTHGYAAPE 264
+H A V++RD K SN+LL+ + K+ DFGLA+ A P D T T+ + T Y APE
Sbjct: 140 IHSA--NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
Query: 265 YVATGRLTTKS-DVYSFGVVLLELLSGR 291
+ + TKS D++S G +L E+LS R
Sbjct: 198 IMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 119/288 (41%), Gaps = 44/288 (15%)
Query: 80 ATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVK---KLKPEGFQGHKEWL 136
A +F LG+G FG VY Q S ++A+K K + E +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQ---------SKFILALKVLFKAQLEKAGVEHQLR 61
Query: 137 TEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA 196
EV L HPN+++L GY + L+ E+ P G++ L Q LS + A
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTA 116
Query: 197 IGA---AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 253
A L++ H +VI+RD K N+LL + K++DFG + P+ R T
Sbjct: 117 TYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TD 170
Query: 254 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYL 313
+ GT Y PE + K D++S GV+ E L G+ + A Y
Sbjct: 171 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQ 217
Query: 314 SDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 361
+++ R+ T +P A L + L + P RP + EVL
Sbjct: 218 ETYKRISRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 260
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 101/208 (48%), Gaps = 15/208 (7%)
Query: 88 SLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH-KEWLTEVNYLGQLH 146
S +GEG +G V + + + + VA+KK+ P Q + + L E+ L +
Sbjct: 31 SYIGEGAYGMVCSAYDNVNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFR 81
Query: 147 HPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRR-GPQPLSWAVRMKVAIGAAKGLTF 205
H N++ + + ++ + +E L++ Q LS +GL +
Sbjct: 82 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKY 141
Query: 206 LHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTHGYAAPE 264
+H A V++RD K SN+LL+ + K+ DFGLA+ A P D T T+ + T Y APE
Sbjct: 142 IHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 199
Query: 265 YVATGRLTTKS-DVYSFGVVLLELLSGR 291
+ + TKS D++S G +L E+LS R
Sbjct: 200 IMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 101/208 (48%), Gaps = 15/208 (7%)
Query: 88 SLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH-KEWLTEVNYLGQLH 146
S +GEG +G V + + + + VA+KK+ P Q + + L E+ L +
Sbjct: 27 SYIGEGAYGMVCSAYDNLNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFR 77
Query: 147 HPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRR-GPQPLSWAVRMKVAIGAAKGLTF 205
H N++ + + ++ + +E L++ Q LS +GL +
Sbjct: 78 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKY 137
Query: 206 LHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTHGYAAPE 264
+H A V++RD K SN+LL+ + K+ DFGLA+ A P D T T+ + T Y APE
Sbjct: 138 IHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 195
Query: 265 YVATGRLTTKS-DVYSFGVVLLELLSGR 291
+ + TKS D++S G +L E+LS R
Sbjct: 196 IMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 101/208 (48%), Gaps = 15/208 (7%)
Query: 88 SLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH-KEWLTEVNYLGQLH 146
S +GEG +G V + + + + VA+KK+ P Q + + L E+ L +
Sbjct: 33 SYIGEGAYGMVCSAYDNLNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFR 83
Query: 147 HPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRR-GPQPLSWAVRMKVAIGAAKGLTF 205
H N++ + + ++ + +E L++ Q LS +GL +
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRGLKY 143
Query: 206 LHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTHGYAAPE 264
+H A V++RD K SN+LL+ + K+ DFGLA+ A P D T T+ + T Y APE
Sbjct: 144 IHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 201
Query: 265 YVATGRLTTKS-DVYSFGVVLLELLSGR 291
+ + TKS D++S G +L E+LS R
Sbjct: 202 IMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 119/288 (41%), Gaps = 44/288 (15%)
Query: 80 ATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVK---KLKPEGFQGHKEWL 136
A +F LG+G FG VY Q S ++A+K K + E +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQ---------SKFILALKVLFKAQLEKAGVEHQLR 56
Query: 137 TEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA 196
EV L HPN+++L GY + L+ E+ P G++ L Q LS + A
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTA 111
Query: 197 IGA---AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 253
A L++ H +VI+RD K N+LL + K++DFG + P+ R T
Sbjct: 112 TYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TT 165
Query: 254 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYL 313
+ GT Y PE + K D++S GV+ E L G+ + A Y
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQ 212
Query: 314 SDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 361
+++ R+ T +P A L + L + P RP + EVL
Sbjct: 213 ETYKRISRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 101/208 (48%), Gaps = 15/208 (7%)
Query: 88 SLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH-KEWLTEVNYLGQLH 146
S +GEG +G V + + + + VA+KK+ P Q + + L E+ L +
Sbjct: 49 SYIGEGAYGMVCSAYDNVNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFR 99
Query: 147 HPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRR-GPQPLSWAVRMKVAIGAAKGLTF 205
H N++ + + ++ + +E L++ Q LS +GL +
Sbjct: 100 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKY 159
Query: 206 LHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTHGYAAPE 264
+H A V++RD K SN+LL+ + K+ DFGLA+ A P D T T+ + T Y APE
Sbjct: 160 IHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 217
Query: 265 YVATGRLTTKS-DVYSFGVVLLELLSGR 291
+ + TKS D++S G +L E+LS R
Sbjct: 218 IMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 119/288 (41%), Gaps = 44/288 (15%)
Query: 80 ATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVK---KLKPEGFQGHKEWL 136
A +F LG+G FG VY Q S ++A+K K + E +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQ---------SKFILALKVLFKAQLEKAGVEHQLR 61
Query: 137 TEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA 196
EV L HPN+++L GY + L+ E+ P G++ L Q LS + A
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTA 116
Query: 197 IGA---AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 253
A L++ H +VI+RD K N+LL + K++DFG + P+ R T
Sbjct: 117 TYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TT 170
Query: 254 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYL 313
+ GT Y PE + K D++S GV+ E L G+ + A Y
Sbjct: 171 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQ 217
Query: 314 SDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 361
+++ R+ T +P A L + L + P RP + EVL
Sbjct: 218 ETYKRISRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 260
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 118/288 (40%), Gaps = 44/288 (15%)
Query: 80 ATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVK---KLKPEGFQGHKEWL 136
A +F LG+G FG VY Q S ++A+K K + E +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQ---------SKFILALKVLFKAQLEKAGVEHQLR 82
Query: 137 TEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA 196
EV L HPN+++L GY + L+ E+ P G++ L Q LS + A
Sbjct: 83 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTA 137
Query: 197 ---IGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 253
A L++ H +VI+RD K N+LL + K++DFG + P+ R
Sbjct: 138 TYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----DD 191
Query: 254 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYL 313
+ GT Y PE + K D++S GV+ E L G+ + A Y
Sbjct: 192 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQ 238
Query: 314 SDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 361
+++ R+ T +P A L + L + P RP + EVL
Sbjct: 239 ETYKRISRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 281
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 120/283 (42%), Gaps = 37/283 (13%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLK---PEGFQGHKEWLTEVNYLGQLH 146
+G G FG V+ G + +VAVK + P + ++L E L Q
Sbjct: 122 IGRGNFGEVFSGRLR---------ADNTLVAVKSCRETLPPDLKA--KFLQEARILKQYS 170
Query: 147 HPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFL 206
HPN+V+LIG C + + +V E + G L G + L +++ AA G+ +L
Sbjct: 171 HPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGAR-LRVKTLLQMVGDAAAGMEYL 229
Query: 207 HDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYV 266
I+RD A N L+ + K+SDFG+++ G + APE +
Sbjct: 230 ES--KCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEAL 287
Query: 267 ATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTK 326
GR +++SDV+SFG++L E S +G A PY + + R K
Sbjct: 288 NYGRYSSESDVWSFGILLWETFS---------LG--------ASPYPNLSNQQTREFVEK 330
Query: 327 LGGQYPQKAAHTAATLAL--QCLNNEPKLRPRMSEVLAILERL 367
GG+ P A L QC EP RP S + L+ +
Sbjct: 331 -GGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 119/288 (41%), Gaps = 44/288 (15%)
Query: 80 ATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVK---KLKPEGFQGHKEWL 136
A +F LG+G FG VY Q S ++A+K K + E +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQ---------SKFILALKVLFKAQLEKAGVEHQLR 59
Query: 137 TEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA 196
EV L HPN+++L GY + L+ E+ P G++ L Q LS + A
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTA 114
Query: 197 IGA---AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 253
A L++ H +VI+RD K N+LL + K++DFG + P+ R T
Sbjct: 115 TYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TT 168
Query: 254 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYL 313
+ GT Y PE + K D++S GV+ E L G+ + A Y
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQ 215
Query: 314 SDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 361
+++ R+ T +P A L + L + P RP + EVL
Sbjct: 216 ETYKRISRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 101/208 (48%), Gaps = 15/208 (7%)
Query: 88 SLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH-KEWLTEVNYLGQLH 146
S +GEG +G V + + + + VA+KK+ P Q + + L E+ L +
Sbjct: 29 SYIGEGAYGMVCSAYDNVNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFR 79
Query: 147 HPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRR-GPQPLSWAVRMKVAIGAAKGLTF 205
H N++ + + ++ + +E L++ Q LS +GL +
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKY 139
Query: 206 LHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTHGYAAPE 264
+H A V++RD K SN+LL+ + K+ DFGLA+ A P D T T+ + T Y APE
Sbjct: 140 IHSA--NVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
Query: 265 YVATGRLTTKS-DVYSFGVVLLELLSGR 291
+ + TKS D++S G +L E+LS R
Sbjct: 198 IMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 119/288 (41%), Gaps = 44/288 (15%)
Query: 80 ATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVK---KLKPEGFQGHKEWL 136
A +F LG+G FG VY Q S ++A+K K + E +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQ---------SKFILALKVLFKAQLEKAGVEHQLR 56
Query: 137 TEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA 196
EV L HPN+++L GY + L+ E+ P G++ L Q LS + A
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTA 111
Query: 197 IGA---AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 253
A L++ H +VI+RD K N+LL + K++DFG + P+ R T
Sbjct: 112 TYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TD 165
Query: 254 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYL 313
+ GT Y PE + K D++S GV+ E L G+ + A Y
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQ 212
Query: 314 SDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 361
+++ R+ T +P A L + L + P RP + EVL
Sbjct: 213 ETYKRISRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 119/288 (41%), Gaps = 44/288 (15%)
Query: 80 ATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVK---KLKPEGFQGHKEWL 136
A +F LG+G FG VY Q S ++A+K K + E +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQ---------SKFILALKVLFKAQLEKAGVEHQLR 56
Query: 137 TEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA 196
EV L HPN+++L GY + L+ E+ P G++ L Q LS + A
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTA 111
Query: 197 IGA---AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 253
A L++ H +VI+RD K N+LL + K++DFG + P+ R T
Sbjct: 112 TYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TD 165
Query: 254 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYL 313
+ GT Y PE + K D++S GV+ E L G+ + A Y
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQ 212
Query: 314 SDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 361
+++ R+ T +P A L + L + P RP + EVL
Sbjct: 213 ETYKRISRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 120/283 (42%), Gaps = 37/283 (13%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLK---PEGFQGHKEWLTEVNYLGQLH 146
+G G FG V+ G + +VAVK + P + ++L E L Q
Sbjct: 122 IGRGNFGEVFSGRLR---------ADNTLVAVKSCRETLPPDLKA--KFLQEARILKQYS 170
Query: 147 HPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFL 206
HPN+V+LIG C + + +V E + G L G + L +++ AA G+ +L
Sbjct: 171 HPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGAR-LRVKTLLQMVGDAAAGMEYL 229
Query: 207 HDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYV 266
I+RD A N L+ + K+SDFG+++ G + APE +
Sbjct: 230 ES--KCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEAL 287
Query: 267 ATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTK 326
GR +++SDV+SFG++L E S +G A PY + + R K
Sbjct: 288 NYGRYSSESDVWSFGILLWETFS---------LG--------ASPYPNLSNQQTREFVEK 330
Query: 327 LGGQYPQKAAHTAATLAL--QCLNNEPKLRPRMSEVLAILERL 367
GG+ P A L QC EP RP S + L+ +
Sbjct: 331 -GGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 118/288 (40%), Gaps = 44/288 (15%)
Query: 80 ATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVK---KLKPEGFQGHKEWL 136
A +F LG+G FG VY Q S ++A+K K + E +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQ---------SKFILALKVLFKAQLEKAGVEHQLR 61
Query: 137 TEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA 196
EV L HPN+++L GY + L+ E+ P+G + L Q LS + A
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL-----QKLSKFDEQRTA 116
Query: 197 IGA---AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 253
A L++ H +VI+RD K N+LL + K++DFG + P+ R
Sbjct: 117 TYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----XX 170
Query: 254 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYL 313
+ GT Y PE + K D++S GV+ E L G+ + A Y
Sbjct: 171 LXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQ 217
Query: 314 SDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 361
+++ R+ T +P A L + L + P RP + EVL
Sbjct: 218 ETYKRISRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 260
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 101/208 (48%), Gaps = 15/208 (7%)
Query: 88 SLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH-KEWLTEVNYLGQLH 146
S +GEG +G V + + + + VA++K+ P Q + + L E+ L +
Sbjct: 33 SYIGEGAYGMVCSAYDNLNKVR---------VAIRKISPFEHQTYCQRTLREIKILLRFR 83
Query: 147 HPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRR-GPQPLSWAVRMKVAIGAAKGLTF 205
H N++ + + ++ + +E L++ Q LS +GL +
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKY 143
Query: 206 LHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTHGYAAPE 264
+H A V++RD K SN+LL+ + K+ DFGLA+ A P D T T+ + T Y APE
Sbjct: 144 IHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 201
Query: 265 YVATGRLTTKS-DVYSFGVVLLELLSGR 291
+ + TKS D++S G +L E+LS R
Sbjct: 202 IMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 122/278 (43%), Gaps = 44/278 (15%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHK---EWLTEVNYLGQLH 146
LG G FG K I +H L+ K VAVK L + + + E+ L
Sbjct: 19 LGVGTFG---KVKIGEHQLTGHK------VAVKILNRQKIRSLDVVGKIKREIQNLKLFR 69
Query: 147 HPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFL 206
HP+++KL + +V E++ G L +++ + G A R+ I +A
Sbjct: 70 HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHR 129
Query: 207 HDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYV 266
H V++RD K N+LLDA NAK++DFGL+ G+ S G+ YAAPE V
Sbjct: 130 H----MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC---GSPNYAAPE-V 181
Query: 267 ATGRLTT--KSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMD 324
+GRL + D++S GV+L LL G D V P L K +
Sbjct: 182 ISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV-----------PTLFKKIR------ 224
Query: 325 TKLGGQY--PQKAAHTAATLALQCLNNEPKLRPRMSEV 360
GG + P+ + ATL + L +P R + ++
Sbjct: 225 ---GGVFYIPEYLNRSVATLLMHMLQVDPLKRATIKDI 259
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 100/208 (48%), Gaps = 15/208 (7%)
Query: 88 SLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH-KEWLTEVNYLGQLH 146
S +GEG +G V + + + + VA+KK+ P Q + + L E+ L
Sbjct: 31 SYIGEGAYGMVCSAYDNVNKVR---------VAIKKISPFEHQTYCQRTLREIKILLAFR 81
Query: 147 HPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRR-GPQPLSWAVRMKVAIGAAKGLTF 205
H N++ + + ++ + +E L++ Q LS +GL +
Sbjct: 82 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKY 141
Query: 206 LHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTHGYAAPE 264
+H A V++RD K SN+LL+ + K+ DFGLA+ A P D T T+ + T Y APE
Sbjct: 142 IHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 199
Query: 265 YVATGRLTTKS-DVYSFGVVLLELLSGR 291
+ + TKS D++S G +L E+LS R
Sbjct: 200 IMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 101/216 (46%), Gaps = 20/216 (9%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH-KEWLTEVNYLGQL-HH 147
LGEG FG V + + KP + VAVK LK + + + ++E+ + + H
Sbjct: 89 LGEGCFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 146
Query: 148 PNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMK------------- 194
N++ L+G C + ++ E+ KG+L +L R P + ++ +
Sbjct: 147 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 206
Query: 195 -VAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 253
A+G+ +L A + I+RD A N+L+ K++DFGLA+ D +T
Sbjct: 207 SCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 264
Query: 254 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 289
+ APE + T +SDV+SFGV++ E+ +
Sbjct: 265 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 119/288 (41%), Gaps = 44/288 (15%)
Query: 80 ATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVK---KLKPEGFQGHKEWL 136
A +F LG+G FG VY Q S ++A+K K + E +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQ---------SKFILALKVLFKAQLEKAGVEHQLR 56
Query: 137 TEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA 196
EV L HPN+++L GY + L+ E+ P G++ L Q LS + A
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTA 111
Query: 197 IGA---AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 253
A L++ H +VI+RD K N+LL + K++DFG + P+ R T
Sbjct: 112 TYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TX 165
Query: 254 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYL 313
+ GT Y PE + K D++S GV+ E L G+ + A Y
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQ 212
Query: 314 SDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 361
+++ R+ T +P A L + L + P RP + EVL
Sbjct: 213 ETYKRISRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 126/298 (42%), Gaps = 44/298 (14%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEG--FQGHKEWLTEVNYLGQL-H 146
LG G FG V I+ + K + VAVK LK EG H+ ++E+ L + H
Sbjct: 35 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLK-EGATHSEHRALMSELKILIHIGH 89
Query: 147 HPNLVKLIGYCLE-GENRLLVYEFMPKGSLENHL---------FRRGPQPL-----SWAV 191
H N+V L+G C + G +++ EF G+L +L ++ P+ L +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
+ + AKG+ FL A + I+RD A NILL + K+ DFGLA+
Sbjct: 150 LICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 207
Query: 252 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKP 311
+ APE + T +SDV+SFGV+L E+ S +G A P
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------LG--------ASP 250
Query: 312 Y--LSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 367
Y + + R + + P L C + EP RP SE++ L L
Sbjct: 251 YPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 119/288 (41%), Gaps = 44/288 (15%)
Query: 80 ATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVK---KLKPEGFQGHKEWL 136
A +F LG+G FG VY Q S ++A+K K + E +
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQ---------SKFILALKVLFKAQLEKAGVEHQLR 55
Query: 137 TEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA 196
EV L HPN+++L GY + L+ E+ P G++ L Q LS + A
Sbjct: 56 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTA 110
Query: 197 IGA---AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 253
A L++ H +VI+RD K N+LL + K++DFG + P+ R T
Sbjct: 111 TYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TT 164
Query: 254 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYL 313
+ GT Y PE + K D++S GV+ E L G+ + A Y
Sbjct: 165 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQ 211
Query: 314 SDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 361
+++ R+ T +P A L + L + P RP + EVL
Sbjct: 212 ETYKRISRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 254
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 128/301 (42%), Gaps = 42/301 (13%)
Query: 82 RNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH--KEWLTEV 139
+ F +LG+G FG V + + Q GS + VAVK LK + +E+L E
Sbjct: 23 QQFTLGRMLGKGEFGSVREAQLKQED------GSFVKVAVKMLKADIIASSDIEEFLREA 76
Query: 140 NYLGQLHHPNLVKLIGYCLEGENR------LLVYEFMPKGSLENHLF--RRGPQPLSWAV 191
+ + HP++ KL+G L + +++ FM G L L R G P + +
Sbjct: 77 ACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPL 136
Query: 192 R--MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTH 249
+ ++ + A G+ +L + I+RD A N +L + ++DFGL++ +GD
Sbjct: 137 QTLVRFMVDIACGMEYL--SSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYR 194
Query: 250 VSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWA 309
+ A E +A T SDV++FGV + E+++ GIE +
Sbjct: 195 QGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRG---QTPYAGIENA----- 246
Query: 310 KPYLSDKRKLFRIMDTKLGG---QYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILER 366
I + +GG + P + L QC + +PK RP + + LE
Sbjct: 247 -----------EIYNYLIGGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELEN 295
Query: 367 L 367
+
Sbjct: 296 I 296
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 119/288 (41%), Gaps = 44/288 (15%)
Query: 80 ATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVK---KLKPEGFQGHKEWL 136
A +F LG+G FG VY Q S ++A+K K + E +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQ---------SKFILALKVLFKAQLEKAGVEHQLR 59
Query: 137 TEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA 196
EV L HPN+++L GY + L+ E+ P G++ L Q LS + A
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTA 114
Query: 197 IGA---AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 253
A L++ H +VI+RD K N+LL + K++DFG + P+ R T
Sbjct: 115 TYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TT 168
Query: 254 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYL 313
+ GT Y PE + K D++S GV+ E L G+ + A Y
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQ 215
Query: 314 SDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 361
+++ R+ T +P A L + L + P RP + EVL
Sbjct: 216 ETYKRISRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 119/288 (41%), Gaps = 44/288 (15%)
Query: 80 ATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVK---KLKPEGFQGHKEWL 136
A +F LG+G FG VY Q S ++A+K K + E +
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQ---------SKFILALKVLFKAQLEKAGVEHQLR 60
Query: 137 TEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA 196
EV L HPN+++L GY + L+ E+ P G++ L Q LS + A
Sbjct: 61 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTA 115
Query: 197 IGA---AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 253
A L++ H +VI+RD K N+LL + K++DFG + P+ R T
Sbjct: 116 TYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TT 169
Query: 254 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYL 313
+ GT Y PE + K D++S GV+ E L G+ + A Y
Sbjct: 170 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQ 216
Query: 314 SDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 361
+++ R+ T +P A L + L + P RP + EVL
Sbjct: 217 ETYKRISRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 259
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 95/204 (46%), Gaps = 25/204 (12%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEW---LTEVNYLGQLH 146
+G G FG VY ++S VVA+KK+ G Q +++W + EV +L +L
Sbjct: 62 IGHGSFGAVYFARDVRNS---------EVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR 112
Query: 147 HPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFL 206
HPN ++ G L LV E+ GS + L +PL V GA +GL +L
Sbjct: 113 HPNTIQYRGCYLREHTAWLVMEYC-LGSASD-LLEVHKKPLQEVEIAAVTHGALQGLAYL 170
Query: 207 HDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYV 266
H +I+RD KA NILL KL DFG A + +GT + APE +
Sbjct: 171 H--SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN------XFVGTPYWMAPEVI 222
Query: 267 AT---GRLTTKSDVYSFGVVLLEL 287
G+ K DV+S G+ +EL
Sbjct: 223 LAMDEGQYDGKVDVWSLGITCIEL 246
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 124/297 (41%), Gaps = 42/297 (14%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQG-HKEWLTEVNYLGQL-HH 147
LG G FG V I+ + K + VAVK LK H+ ++E+ L + HH
Sbjct: 37 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 92
Query: 148 PNLVKLIGYCLE-GENRLLVYEFMPKGSLENHL---------FRRGPQPL-----SWAVR 192
N+V L+G C + G +++ EF G+L +L ++ P+ L +
Sbjct: 93 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHL 152
Query: 193 MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVST 252
+ + AKG+ FL A + I+RD A NILL + K+ DFGLA+
Sbjct: 153 ICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 210
Query: 253 QVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPY 312
+ APE + T +SDV+SFGV+L E+ S +G A PY
Sbjct: 211 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------LG--------ASPY 253
Query: 313 --LSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 367
+ + R + + P L C + EP RP SE++ L L
Sbjct: 254 PGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 310
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 97/220 (44%), Gaps = 19/220 (8%)
Query: 76 ELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEW 135
++K +F +LG+G FG V+ L+ K + A+K LK + +
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVF--------LAEFKK-TNQFFAIKALKKDVVLMDDDV 62
Query: 136 ---LTEVNYLG-QLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAV 191
+ E L HP L + EN V E++ G L H+ LS A
Sbjct: 63 ECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRAT 122
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
I GL FLH ++YRD K NILLD + + K++DFG+ K GD +
Sbjct: 123 FYAAEI--ILGLQFLH--SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK--T 176
Query: 252 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 291
+ GT Y APE + + D +SFGV+L E+L G+
Sbjct: 177 NEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 216
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 100/208 (48%), Gaps = 15/208 (7%)
Query: 88 SLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH-KEWLTEVNYLGQLH 146
S +GEG +G V + + + + VA+KK+ P Q + + L E+ L
Sbjct: 31 SYIGEGAYGMVCSAYDNVNKVR---------VAIKKISPFEHQTYCQRTLREIKILLAFR 81
Query: 147 HPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRR-GPQPLSWAVRMKVAIGAAKGLTF 205
H N++ + + ++ + +E L++ Q LS +GL +
Sbjct: 82 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKY 141
Query: 206 LHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTHGYAAPE 264
+H A V++RD K SN+LL+ + K+ DFGLA+ A P D T T+ + T Y APE
Sbjct: 142 IHSA--NVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 199
Query: 265 YVATGRLTTKS-DVYSFGVVLLELLSGR 291
+ + TKS D++S G +L E+LS R
Sbjct: 200 IMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 108/219 (49%), Gaps = 21/219 (9%)
Query: 76 ELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLK----PEGFQG 131
++K+ + + LGEG F VYK + +VA+KK+K E G
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKA---------RDKNTNQIVAIKKIKLGHRSEAKDG 54
Query: 132 -HKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWA 190
++ L E+ L +L HPN++ L+ N LV++FM + LE + + L+ +
Sbjct: 55 INRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM-ETDLEV-IIKDNSLVLTPS 112
Query: 191 VRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHV 250
+ +GL +LH + +++RD K +N+LLD KL+DFGLAK+ + +R +
Sbjct: 113 HIKAYMLMTLQGLEYLH--QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYX 170
Query: 251 STQVMGTHGYAAPEYVATGRLT-TKSDVYSFGVVLLELL 288
V T Y APE + R+ D+++ G +L ELL
Sbjct: 171 HQVV--TRWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 95/204 (46%), Gaps = 25/204 (12%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEW---LTEVNYLGQLH 146
+G G FG VY ++S VVA+KK+ G Q +++W + EV +L +L
Sbjct: 23 IGHGSFGAVYFARDVRNS---------EVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR 73
Query: 147 HPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFL 206
HPN ++ G L LV E+ GS + L +PL V GA +GL +L
Sbjct: 74 HPNTIQYRGCYLREHTAWLVMEYC-LGSASD-LLEVHKKPLQEVEIAAVTHGALQGLAYL 131
Query: 207 HDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYV 266
H +I+RD KA NILL KL DFG A + +GT + APE +
Sbjct: 132 H--SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN------XFVGTPYWMAPEVI 183
Query: 267 AT---GRLTTKSDVYSFGVVLLEL 287
G+ K DV+S G+ +EL
Sbjct: 184 LAMDEGQYDGKVDVWSLGITCIEL 207
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 124/297 (41%), Gaps = 42/297 (14%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQG-HKEWLTEVNYLGQL-HH 147
LG G FG V I+ + K + VAVK LK H+ ++E+ L + HH
Sbjct: 26 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 148 PNLVKLIGYCLE-GENRLLVYEFMPKGSLENHL---------FRRGPQPL-----SWAVR 192
N+V L+G C + G +++ EF G+L +L ++ P+ L +
Sbjct: 82 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 193 MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVST 252
+ + AKG+ FL A + I+RD A NILL + K+ DFGLA+
Sbjct: 142 ICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 199
Query: 253 QVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPY 312
+ APE + T +SDV+SFGV+L E+ S +G A PY
Sbjct: 200 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------LG--------ASPY 242
Query: 313 --LSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 367
+ + R + + P L C + EP RP SE++ L L
Sbjct: 243 PGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 299
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 102/219 (46%), Gaps = 39/219 (17%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKE-WLTEVNYLGQLHHP 148
LG GGFG+V + WI Q +G VA+K+ + E ++E W E+ + +L+HP
Sbjct: 23 LGTGGFGYVLR-WIHQ--------DTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHP 73
Query: 149 NLVKL------IGYCLEGENRLLVYEFMPKGSLENHL--------FRRGPQPLSWAVRMK 194
N+V + + LL E+ G L +L + GP +R
Sbjct: 74 NVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGP------IRTL 127
Query: 195 VAIGAAKGLTFLHDAESQVIYRDFKASNILLD---AEFNAKLSDFGLAKAGPTGDRTHVS 251
++ + L +LH E+++I+RD K NI+L K+ D G AK G+ +
Sbjct: 128 LS-DISSALRYLH--ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE---LC 181
Query: 252 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
T+ +GT Y APE + + T D +SFG + E ++G
Sbjct: 182 TEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 220
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 102/219 (46%), Gaps = 39/219 (17%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKE-WLTEVNYLGQLHHP 148
LG GGFG+V + WI Q +G VA+K+ + E ++E W E+ + +L+HP
Sbjct: 22 LGTGGFGYVLR-WIHQ--------DTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHP 72
Query: 149 NLVKL------IGYCLEGENRLLVYEFMPKGSLENHL--------FRRGPQPLSWAVRMK 194
N+V + + LL E+ G L +L + GP +R
Sbjct: 73 NVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGP------IRTL 126
Query: 195 VAIGAAKGLTFLHDAESQVIYRDFKASNILLD---AEFNAKLSDFGLAKAGPTGDRTHVS 251
++ + L +LH E+++I+RD K NI+L K+ D G AK G+ +
Sbjct: 127 LS-DISSALRYLH--ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE---LC 180
Query: 252 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
T+ +GT Y APE + + T D +SFG + E ++G
Sbjct: 181 TEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 219
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 101/216 (46%), Gaps = 20/216 (9%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH-KEWLTEVNYLGQL-HH 147
LGEG FG V + + KP + VAVK LK + + + ++E+ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 148 PNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMK------------- 194
N++ L+G C + ++ E+ KG+L +L R P + ++ +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 195 -VAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 253
A+G+ +L A + I+RD A N+L+ K++DFGLA+ D +T
Sbjct: 161 SCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTN 218
Query: 254 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 289
+ APE + T +SDV+SFGV++ E+ +
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 124/297 (41%), Gaps = 42/297 (14%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQG-HKEWLTEVNYLGQL-HH 147
LG G FG V I+ + K + VAVK LK H+ ++E+ L + HH
Sbjct: 35 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 148 PNLVKLIGYCLE-GENRLLVYEFMPKGSLENHL---------FRRGPQPL-----SWAVR 192
N+V L+G C + G +++ EF G+L +L ++ P+ L +
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 193 MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVST 252
+ + AKG+ FL A + I+RD A NILL + K+ DFGLA+
Sbjct: 151 ICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKG 208
Query: 253 QVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPY 312
+ APE + T +SDV+SFGV+L E+ S +G A PY
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------LG--------ASPY 251
Query: 313 --LSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 367
+ + R + + P L C + EP RP SE++ L L
Sbjct: 252 PGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 129/312 (41%), Gaps = 71/312 (22%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYL 142
+F+ L+G GGFG V+K +H + G ++++K + +E V L
Sbjct: 13 DFKEIELIGSGGFGQVFKA---KHRID------GKTYVIRRVKYNNEKAERE----VKAL 59
Query: 143 GQLHHPNLVKLIGYCLEG-------------------ENR-----------LLVYEFMPK 172
+L H N+V G C +G EN + EF K
Sbjct: 60 AKLDHVNIVHYNG-CWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDK 118
Query: 173 GSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAK 232
G+LE + +R + L + +++ KG+ ++H ++I+RD K SNI L K
Sbjct: 119 GTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIH--SKKLIHRDLKPSNIFLVDTKQVK 176
Query: 233 LSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRC 292
+ DFGL + + T+ GT Y +PE +++ + D+Y+ G++L ELL
Sbjct: 177 IGDFGLVTSLKNDGK---RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLH--- 230
Query: 293 AVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPK 352
V T + D +SD I D K TL + L+ +P+
Sbjct: 231 -VCDTAFETSKFFTDLRDGIISD------IFDKK------------EKTLLQKLLSKKPE 271
Query: 353 LRPRMSEVLAIL 364
RP SE+L L
Sbjct: 272 DRPNTSEILRTL 283
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 122/278 (43%), Gaps = 44/278 (15%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHK---EWLTEVNYLGQLH 146
LG G FG K I +H L+ K VAVK L + + + E+ L
Sbjct: 19 LGVGTFG---KVKIGEHQLTGHK------VAVKILNRQKIRSLDVVGKIKREIQNLKLFR 69
Query: 147 HPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFL 206
HP+++KL + +V E++ G L +++ + G A R+ I +A
Sbjct: 70 HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHR 129
Query: 207 HDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYV 266
H V++RD K N+LLDA NAK++DFGL+ G+ S G+ YAAPE V
Sbjct: 130 H----MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSC---GSPNYAAPE-V 181
Query: 267 ATGRLTT--KSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMD 324
+GRL + D++S GV+L LL G D V P L K +
Sbjct: 182 ISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV-----------PTLFKKIR------ 224
Query: 325 TKLGGQY--PQKAAHTAATLALQCLNNEPKLRPRMSEV 360
GG + P+ + ATL + L +P R + ++
Sbjct: 225 ---GGVFYIPEYLNRSVATLLMHMLQVDPLKRATIKDI 259
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 101/216 (46%), Gaps = 20/216 (9%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH-KEWLTEVNYLGQL-HH 147
LGEG FG V + + KP + VAVK LK + + + ++E+ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKH 100
Query: 148 PNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMK------------- 194
N++ L+G C + ++ E+ KG+L +L R P + ++ +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 195 -VAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 253
A+G+ +L A + I+RD A N+L+ K++DFGLA+ D +T
Sbjct: 161 SCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 254 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 289
+ APE + T +SDV+SFGV++ E+ +
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 103/219 (47%), Gaps = 17/219 (7%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYL 142
N++ LGEG FG V + H+ + K ++ K L QG E E++YL
Sbjct: 5 NYQIVKTLGEGSFGKVKLAY---HTTTGQKVALK-IINKKVLAKSDMQGRIE--REISYL 58
Query: 143 GQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKG 202
L HP+++KL + ++V E+ L +++ +R A R I +A
Sbjct: 59 RLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVE 117
Query: 203 LTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAA 262
H ++++RD K N+LLD N K++DFGL+ G+ S G+ YAA
Sbjct: 118 YCHRH----KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAA 170
Query: 263 PEYVATGRLTT--KSDVYSFGVVLLELLSGRCAVDKTKV 299
PE V +G+L + DV+S GV+L +L R D +
Sbjct: 171 PE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI 208
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 108/231 (46%), Gaps = 29/231 (12%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH 132
+ +K NF +LG+G FG V + + G+ + A+K LK +
Sbjct: 12 NLDRVKLTDFNFL--MVLGKGSFGKV---------MLADRKGTEELYAIKILKKDVVIQD 60
Query: 133 KEW---LTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRG----P 184
+ + E L L P + + C + +RL V E++ G L H+ + G P
Sbjct: 61 DDVECTMVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEP 120
Query: 185 QPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPT 244
Q + +A + + GL FLH + +IYRD K N++LD+E + K++DFG+ K
Sbjct: 121 QAVFYAAEISI------GLFFLH--KRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMM 172
Query: 245 GDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVD 295
T + + GT Y APE +A D +++GV+L E+L+G+ D
Sbjct: 173 DGVT--TREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 124/297 (41%), Gaps = 42/297 (14%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQG-HKEWLTEVNYLGQL-HH 147
LG G FG V I+ + K + VAVK LK H+ ++E+ L + HH
Sbjct: 26 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 148 PNLVKLIGYCLE-GENRLLVYEFMPKGSLENHL---------FRRGPQPL-----SWAVR 192
N+V L+G C + G +++ EF G+L +L ++ P+ L +
Sbjct: 82 LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 193 MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVST 252
+ + AKG+ FL A + I+RD A NILL + K+ DFGLA+
Sbjct: 142 ICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 199
Query: 253 QVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPY 312
+ APE + T +SDV+SFGV+L E+ S +G A PY
Sbjct: 200 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------LG--------ASPY 242
Query: 313 --LSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 367
+ + R + + P L C + EP RP SE++ L L
Sbjct: 243 PGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 299
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 101/216 (46%), Gaps = 20/216 (9%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH-KEWLTEVNYLGQL-HH 147
LGEG FG V + + KP + VAVK LK + + + ++E+ + + H
Sbjct: 30 LGEGCFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 87
Query: 148 PNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMK------------- 194
N++ L+G C + ++ E+ KG+L +L R P + ++ +
Sbjct: 88 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 147
Query: 195 -VAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 253
A+G+ +L A + I+RD A N+L+ K++DFGLA+ D +T
Sbjct: 148 SCTYQLARGMEYL--ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 205
Query: 254 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 289
+ APE + T +SDV+SFGV++ E+ +
Sbjct: 206 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 101/216 (46%), Gaps = 20/216 (9%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH-KEWLTEVNYLGQL-HH 147
LGEG FG V + + KP + VAVK LK + + + ++E+ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 148 PNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMK------------- 194
N++ L+G C + ++ E+ KG+L +L R P + ++ +
Sbjct: 101 KNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 195 -VAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 253
A+G+ +L A + I+RD A N+L+ K++DFGLA+ D +T
Sbjct: 161 SCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 254 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 289
+ APE + T +SDV+SFGV++ E+ +
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 101/216 (46%), Gaps = 20/216 (9%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH-KEWLTEVNYLGQL-HH 147
LGEG FG V + + KP + VAVK LK + + + ++E+ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 148 PNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMK------------- 194
N++ L+G C + ++ E+ KG+L +L R P + ++ +
Sbjct: 101 KNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 195 -VAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 253
A+G+ +L A + I+RD A N+L+ K++DFGLA+ D +T
Sbjct: 161 SCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 254 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 289
+ APE + T +SDV+SFGV++ E+ +
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 103/219 (47%), Gaps = 17/219 (7%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYL 142
N++ LGEG FG V + H+ + K ++ K L QG E E++YL
Sbjct: 15 NYQIVKTLGEGSFGKVKLAY---HTTTGQKVALK-IINKKVLAKSDMQGRIE--REISYL 68
Query: 143 GQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKG 202
L HP+++KL + ++V E+ L +++ +R A R I +A
Sbjct: 69 RLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVE 127
Query: 203 LTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAA 262
H ++++RD K N+LLD N K++DFGL+ G+ S G+ YAA
Sbjct: 128 YCHRH----KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAA 180
Query: 263 PEYVATGRLTT--KSDVYSFGVVLLELLSGRCAVDKTKV 299
PE V +G+L + DV+S GV+L +L R D +
Sbjct: 181 PE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI 218
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 101/216 (46%), Gaps = 20/216 (9%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH-KEWLTEVNYLGQL-HH 147
LGEG FG V + + KP + VAVK LK + + + ++E+ + + H
Sbjct: 32 LGEGCFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 89
Query: 148 PNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMK------------- 194
N++ L+G C + ++ E+ KG+L +L R P + ++ +
Sbjct: 90 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 149
Query: 195 -VAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 253
A+G+ +L A + I+RD A N+L+ K++DFGLA+ D +T
Sbjct: 150 SCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 207
Query: 254 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 289
+ APE + T +SDV+SFGV++ E+ +
Sbjct: 208 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 103/219 (47%), Gaps = 17/219 (7%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYL 142
N++ LGEG FG V + H+ + K ++ K L QG E E++YL
Sbjct: 14 NYQIVKTLGEGSFGKVKLAY---HTTTGQKVALK-IINKKVLAKSDMQGRIE--REISYL 67
Query: 143 GQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKG 202
L HP+++KL + ++V E+ L +++ +R A R I +A
Sbjct: 68 RLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVE 126
Query: 203 LTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAA 262
H ++++RD K N+LLD N K++DFGL+ G+ S G+ YAA
Sbjct: 127 YCHRH----KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAA 179
Query: 263 PEYVATGRLTT--KSDVYSFGVVLLELLSGRCAVDKTKV 299
PE V +G+L + DV+S GV+L +L R D +
Sbjct: 180 PE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI 217
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 124/297 (41%), Gaps = 42/297 (14%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQG-HKEWLTEVNYLGQL-HH 147
LG G FG V I+ + K + VAVK LK H+ ++E+ L + HH
Sbjct: 35 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 148 PNLVKLIGYCLE-GENRLLVYEFMPKGSLENHL---------FRRGPQPL-----SWAVR 192
N+V L+G C + G +++ EF G+L +L ++ P+ L +
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 193 MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVST 252
+ + AKG+ FL A + I+RD A NILL + K+ DFGLA+
Sbjct: 151 ICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 208
Query: 253 QVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPY 312
+ APE + T +SDV+SFGV+L E+ S +G A PY
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------LG--------ASPY 251
Query: 313 --LSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 367
+ + R + + P L C + EP RP SE++ L L
Sbjct: 252 PGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 118/285 (41%), Gaps = 38/285 (13%)
Query: 80 ATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEV 139
A +F LG+G FG VY Q A V+ +L+ G + + EV
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALK----VLFKAQLEKAGVE--HQLRREV 56
Query: 140 NYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGA 199
L HPN+++L GY + L+ E+ P G++ L Q LS + A
Sbjct: 57 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYI 111
Query: 200 ---AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMG 256
A L++ H +VI+RD K N+LL + K++DFG + P+ R T + G
Sbjct: 112 TELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCG 165
Query: 257 THGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDK 316
T Y PE + K D++S GV+ E L G+ + A Y
Sbjct: 166 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQETY 212
Query: 317 RKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 361
+++ R+ T +P A L + L + P RP + EVL
Sbjct: 213 KRISRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 252
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 100/216 (46%), Gaps = 31/216 (14%)
Query: 88 SLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH-KEWLTEVNYLGQLH 146
S +GEG +G V + + + + VA+KK+ P Q + + L E+ L +
Sbjct: 49 SYIGEGAYGMVCSAYDNVNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFR 99
Query: 147 HPNLVKLIGYCLEGENRLL---VYEFMPKGSLENHLFRRG------PQPLSWAVRMKVAI 197
H N++ G N ++ E M L HL Q LS
Sbjct: 100 HENII--------GINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLY 151
Query: 198 GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAK-AGPTGDRTHVSTQVMG 256
+GL ++H A V++RD K SN+LL+ + K+ DFGLA+ A P D T T+ +
Sbjct: 152 QILRGLKYIHSA--NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 209
Query: 257 THGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 291
T Y APE + + TKS D++S G +L E+LS R
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 15/208 (7%)
Query: 88 SLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH-KEWLTEVNYLGQLH 146
S +GEG +G V + + + + VA+KK+ P Q + + L E+ L +
Sbjct: 33 SYIGEGAYGMVCSAYDNLNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFR 83
Query: 147 HPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRR-GPQPLSWAVRMKVAIGAAKGLTF 205
H N++ + + ++ + +E L++ Q LS +GL +
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKY 143
Query: 206 LHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTHGYAAPE 264
+H A V++RD K SN+LL+ + K+ DFGLA+ A P D T + + T Y APE
Sbjct: 144 IHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPE 201
Query: 265 YVATGRLTTKS-DVYSFGVVLLELLSGR 291
+ + TKS D++S G +L E+LS R
Sbjct: 202 IMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 15/208 (7%)
Query: 88 SLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH-KEWLTEVNYLGQLH 146
S +GEG +G V + + + + VA+KK+ P Q + + L E+ L +
Sbjct: 34 SYIGEGAYGMVCSAYDNLNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFR 84
Query: 147 HPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRR-GPQPLSWAVRMKVAIGAAKGLTF 205
H N++ + + ++ + +E L++ Q LS +GL +
Sbjct: 85 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKY 144
Query: 206 LHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTHGYAAPE 264
+H A V++RD K SN+LL+ + K+ DFGLA+ A P D T + + T Y APE
Sbjct: 145 IHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPE 202
Query: 265 YVATGRLTTKS-DVYSFGVVLLELLSGR 291
+ + TKS D++S G +L E+LS R
Sbjct: 203 IMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 119/288 (41%), Gaps = 44/288 (15%)
Query: 80 ATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVK---KLKPEGFQGHKEWL 136
A +F LG+G FG VY Q S ++A+K K + E +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQ---------SKFILALKVLFKAQLEKAGVEHQLR 58
Query: 137 TEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA 196
EV L HPN+++L GY + L+ E+ P G++ L Q LS + A
Sbjct: 59 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTA 113
Query: 197 IGA---AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 253
A L++ H +VI+RD K N+LL + K+++FG + P+ R T
Sbjct: 114 TYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR----TT 167
Query: 254 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYL 313
+ GT Y PE + K D++S GV+ E L G+ + A Y
Sbjct: 168 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQ 214
Query: 314 SDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 361
+++ R+ T +P A L + L + P RP + EVL
Sbjct: 215 ETYKRISRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 257
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 101/216 (46%), Gaps = 20/216 (9%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH-KEWLTEVNYLGQL-HH 147
LGEG FG V + + KP + VAVK LK + + + ++E+ + + H
Sbjct: 35 LGEGCFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 92
Query: 148 PNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMK------------- 194
N++ L+G C + ++ E+ KG+L +L R P + ++ +
Sbjct: 93 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 152
Query: 195 -VAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 253
A+G+ +L A + I+RD A N+L+ K++DFGLA+ D +T
Sbjct: 153 SCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 210
Query: 254 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 289
+ APE + T +SDV+SFGV++ E+ +
Sbjct: 211 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 135/317 (42%), Gaps = 41/317 (12%)
Query: 66 SSNLKAFTFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL- 124
SS + T N + + L+GEG +G V K +G +VA+KK
Sbjct: 9 SSGVDLGTENLYFQSMEKYENLGLVGEGSYGMVMKC---------RNKDTGRIVAIKKFL 59
Query: 125 -KPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN-HLFRR 182
+ K + E+ L QL H NLV L+ C + + LV+EF+ L++ LF
Sbjct: 60 ESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELF-- 117
Query: 183 GPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAK-- 240
P L + V K G+ F H +I+RD K NIL+ KL DFG A+
Sbjct: 118 -PNGLDYQVVQKYLFQIINGIGFCH--SHNIIHRDIKPENILVSQSGVVKLCDFGFARTL 174
Query: 241 AGPTGDRTHVSTQVMGTHGYAAPE-YVATGRLTTKSDVYSFGVVLLELLSGR------CA 293
A P V + T Y APE V + DV++ G ++ E+ G
Sbjct: 175 AAP----GEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSD 230
Query: 294 VDKTKVGIEQSLVDWAKPY--LSDKRKLF---RIMDTK----LGGQYPQKAAHTAATLAL 344
+D+ I L + + L +K +F R+ + K L +YP K + LA
Sbjct: 231 IDQL-YHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYP-KLSEVVIDLAK 288
Query: 345 QCLNNEPKLRPRMSEVL 361
+CL+ +P RP +E+L
Sbjct: 289 KCLHIDPDKRPFCAELL 305
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 103/219 (47%), Gaps = 17/219 (7%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYL 142
N++ LGEG FG V + H+ + K ++ K L QG E E++YL
Sbjct: 9 NYQIVKTLGEGSFGKVKLAY---HTTTGQKVALK-IINKKVLAKSDMQGRIE--REISYL 62
Query: 143 GQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKG 202
L HP+++KL + ++V E+ L +++ +R A R I +A
Sbjct: 63 RLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVE 121
Query: 203 LTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAA 262
H ++++RD K N+LLD N K++DFGL+ G+ S G+ YAA
Sbjct: 122 YCHRH----KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAA 174
Query: 263 PEYVATGRLTT--KSDVYSFGVVLLELLSGRCAVDKTKV 299
PE V +G+L + DV+S GV+L +L R D +
Sbjct: 175 PE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI 212
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 118/288 (40%), Gaps = 44/288 (15%)
Query: 80 ATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVK---KLKPEGFQGHKEWL 136
A +F LG+G FG VY Q S ++A+K K + E +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQ---------SKFILALKVLFKAQLEKAGVEHQLR 58
Query: 137 TEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA 196
EV L HPN+++L GY + L+ E+ P G++ L Q LS + A
Sbjct: 59 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTA 113
Query: 197 IGA---AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 253
A L++ H +VI+RD K N+LL + K++DFG + P+ R
Sbjct: 114 TYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----XX 167
Query: 254 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYL 313
+ GT Y PE + K D++S GV+ E L G+ + A Y
Sbjct: 168 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQ 214
Query: 314 SDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 361
+++ R+ T +P A L + L + P RP + EVL
Sbjct: 215 ETYKRISRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 257
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 101/216 (46%), Gaps = 20/216 (9%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH-KEWLTEVNYLGQL-HH 147
LGEG FG V + + KP + VAVK LK + + + ++E+ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 148 PNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMK------------- 194
N++ L+G C + ++ E+ KG+L +L R P + ++ +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 195 -VAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 253
A+G+ +L A + I+RD A N+L+ +++DFGLA+ D +T
Sbjct: 161 SCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTN 218
Query: 254 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 289
+ APE + T +SDV+SFGV++ E+ +
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 118/288 (40%), Gaps = 44/288 (15%)
Query: 80 ATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVK---KLKPEGFQGHKEWL 136
A +F LG+G FG VY Q S ++A+K K + E +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQ---------SKFILALKVLFKAQLEKAGVEHQLR 57
Query: 137 TEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA 196
EV L HPN+++L GY + L+ E+ P G++ L Q LS + A
Sbjct: 58 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTA 112
Query: 197 IGA---AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 253
A L++ H +VI+RD K N+LL + K++DFG + P+ R
Sbjct: 113 TYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----DT 166
Query: 254 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYL 313
+ GT Y PE + K D++S GV+ E L G+ + A Y
Sbjct: 167 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQ 213
Query: 314 SDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 361
+++ R+ T +P A L + L + P RP + EVL
Sbjct: 214 ETYKRISRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 256
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 106/226 (46%), Gaps = 31/226 (13%)
Query: 76 ELKTATRNFRPDSL------LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGF 129
E + R+ P+ + LG+G FG VYK +G + A K ++ +
Sbjct: 7 EYEHVRRDLDPNEVWEIVGELGDGAFGKVYKA---------KNKETGALAAAKVIETKSE 57
Query: 130 QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFR--RGPQPL 187
+ ++++ E+ L HP +VKL+G ++ EF P G+++ + RG L
Sbjct: 58 EELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRG---L 114
Query: 188 SWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGL-AKAGPTGD 246
+ V + L FLH ++I+RD KA N+L+ E + +L+DFG+ AK T
Sbjct: 115 TEPQIQVVCRQMLEALNFLHS--KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQ 172
Query: 247 RTHVSTQVMGTHGYAAPEYVATGRLTT-----KSDVYSFGVVLLEL 287
+ +GT + APE V + K+D++S G+ L+E+
Sbjct: 173 K---RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 215
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 124/297 (41%), Gaps = 42/297 (14%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQG-HKEWLTEVNYLGQL-HH 147
LG G FG V I+ + K + VAVK LK H+ ++E+ L + HH
Sbjct: 26 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 148 PNLVKLIGYCLE-GENRLLVYEFMPKGSLENHL---------FRRGPQPL-----SWAVR 192
N+V L+G C + G +++ EF G+L +L ++ P+ L +
Sbjct: 82 LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 193 MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVST 252
+ + AKG+ FL A + I+RD A NILL + K+ DFGLA+
Sbjct: 142 ICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 199
Query: 253 QVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPY 312
+ APE + T +SDV+SFGV+L E+ S +G A PY
Sbjct: 200 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------LG--------ASPY 242
Query: 313 --LSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 367
+ + R + + P L C + EP RP SE++ L L
Sbjct: 243 PGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 299
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 118/288 (40%), Gaps = 44/288 (15%)
Query: 80 ATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVK---KLKPEGFQGHKEWL 136
A +F LG+G FG VY Q S ++A+K K + E +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQ---------SKFILALKVLFKAQLEKAGVEHQLR 59
Query: 137 TEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA 196
EV L HPN+++L GY + L+ E+ P G++ L Q LS + A
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTA 114
Query: 197 IGA---AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 253
A L++ H +VI+RD K N+LL + K++DFG + P+ R
Sbjct: 115 TYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----AA 168
Query: 254 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYL 313
+ GT Y PE + K D++S GV+ E L G+ + A Y
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQ 215
Query: 314 SDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 361
+++ R+ T +P A L + L + P RP + EVL
Sbjct: 216 ETYKRISRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 124/297 (41%), Gaps = 42/297 (14%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQG-HKEWLTEVNYLGQL-HH 147
LG G FG V I+ + K + VAVK LK H+ ++E+ L + HH
Sbjct: 72 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 127
Query: 148 PNLVKLIGYCLE-GENRLLVYEFMPKGSLENHL---------FRRGPQPL-----SWAVR 192
N+V L+G C + G +++ EF G+L +L ++ P+ L +
Sbjct: 128 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 187
Query: 193 MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVST 252
+ + AKG+ FL A + I+RD A NILL + K+ DFGLA+
Sbjct: 188 ICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 245
Query: 253 QVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPY 312
+ APE + T +SDV+SFGV+L E+ S +G A PY
Sbjct: 246 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------LG--------ASPY 288
Query: 313 --LSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 367
+ + R + + P L C + EP RP SE++ L L
Sbjct: 289 PGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 345
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 124/297 (41%), Gaps = 42/297 (14%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQG-HKEWLTEVNYLGQL-HH 147
LG G FG V I+ + K + VAVK LK H+ ++E+ L + HH
Sbjct: 26 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 148 PNLVKLIGYCLE-GENRLLVYEFMPKGSLENHL---------FRRGPQPL-----SWAVR 192
N+V L+G C + G +++ EF G+L +L ++ P+ L +
Sbjct: 82 LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 193 MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVST 252
+ + AKG+ FL A + I+RD A NILL + K+ DFGLA+
Sbjct: 142 ICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 199
Query: 253 QVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPY 312
+ APE + T +SDV+SFGV+L E+ S +G A PY
Sbjct: 200 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------LG--------ASPY 242
Query: 313 --LSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 367
+ + R + + P L C + EP RP SE++ L L
Sbjct: 243 PGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 299
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 106/219 (48%), Gaps = 27/219 (12%)
Query: 78 KTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLT 137
K + ++F+ LG G FG V H + +G A+K LK E K+ +
Sbjct: 2 KYSLQDFQILRTLGTGSFGRV-------HLIRSRH--NGRYYAMKVLKKEIVVRLKQ-VE 51
Query: 138 EVN----YLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFR--RGPQPLSWAV 191
N L + HP ++++ G + + ++ +++ G L + L + R P P++
Sbjct: 52 HTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFY 111
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
+V + L +LH + +IYRD K NILLD + K++DFG AK P V+
Sbjct: 112 AAEVCLA----LEYLHSKD--IIYRDLKPENILLDKNGHIKITDFGFAKYVPD-----VT 160
Query: 252 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+ GT Y APE V+T D +SFG+++ E+L+G
Sbjct: 161 YXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAG 199
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 102/205 (49%), Gaps = 16/205 (7%)
Query: 89 LLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLT--EVNYLGQLH 146
+LG+G FG V+ + + S S A+ + A+K LK + T E + L +++
Sbjct: 31 VLGQGSFGKVF--LVKKISGSDAR----QLYAMKVLKKATLKVRDRVRTKMERDILVEVN 84
Query: 147 HPNLVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTF 205
HP +VKL Y + E +L L+ +F+ G L F R + + + A L
Sbjct: 85 HPFIVKL-HYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFYLAELALAL 139
Query: 206 LHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEY 265
H +IYRD K NILLD E + KL+DFGL+K + D + GT Y APE
Sbjct: 140 DHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKE--SIDHEKKAYSFCGTVEYMAPEV 197
Query: 266 VATGRLTTKSDVYSFGVVLLELLSG 290
V T +D +SFGV++ E+L+G
Sbjct: 198 VNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 119/288 (41%), Gaps = 44/288 (15%)
Query: 80 ATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVK---KLKPEGFQGHKEWL 136
A +F LG+G FG VY Q S ++A+K K + E +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQ---------SKFILALKVLFKAQLEKAGVEHQLR 59
Query: 137 TEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA 196
EV L HPN+++L GY + L+ E+ P G++ L Q LS + A
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTA 114
Query: 197 IGA---AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 253
A L++ H +VI+RD K N+LL + K+++FG + P+ R T
Sbjct: 115 TYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR----TT 168
Query: 254 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYL 313
+ GT Y PE + K D++S GV+ E L G+ + A Y
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQ 215
Query: 314 SDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 361
+++ R+ T +P A L + L + P RP + EVL
Sbjct: 216 ETYKRISRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 118/288 (40%), Gaps = 44/288 (15%)
Query: 80 ATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVK---KLKPEGFQGHKEWL 136
A +F LG+G FG VY + S ++A+K K + E +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLA---------REKNSKFILALKVLFKAQLEKAGVEHQLR 56
Query: 137 TEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA 196
EV L HPN+++L GY + L+ E+ P G++ L Q LS + A
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYREL-----QKLSKFDEQRTA 111
Query: 197 IGA---AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 253
A L++ H +VI+RD K N+LL + K++DFG + P+ R
Sbjct: 112 TYITELANALSYCHS--KKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----AA 165
Query: 254 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYL 313
+ GT Y PE + K D++S GV+ E L G+ + A Y
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQ 212
Query: 314 SDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 361
+++ R+ T +P A L + L + P RP + EVL
Sbjct: 213 DTYKRISRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 118/288 (40%), Gaps = 44/288 (15%)
Query: 80 ATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVK---KLKPEGFQGHKEWL 136
A +F LG+G FG VY Q S ++A+K K + E +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQ---------SKFILALKVLFKAQLEKAGVEHQLR 56
Query: 137 TEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA 196
EV L HPN+++L GY + L+ E+ P G++ L Q LS + A
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTA 111
Query: 197 IGA---AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 253
A L++ H +VI+RD K N+LL + K++DFG + P+ R
Sbjct: 112 TYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----AA 165
Query: 254 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYL 313
+ GT Y PE + K D++S GV+ E L G+ + A Y
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQ 212
Query: 314 SDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 361
+++ R+ T +P A L + L + P RP + EVL
Sbjct: 213 ETYKRISRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 112/230 (48%), Gaps = 26/230 (11%)
Query: 69 LKAFTFNELKTA---TRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVK--- 122
L+AF + K +F S LG G G V+K KP SG+V+A K
Sbjct: 52 LEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFK--------VSHKP-SGLVMARKLIH 102
Query: 123 -KLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFR 181
++KP + + E+ L + + P +V G + E M GSL+ L +
Sbjct: 103 LEIKP---AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK 159
Query: 182 RGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKA 241
G P + KV+I KGLT+L + + ++++RD K SNIL+++ KL DFG++
Sbjct: 160 AGRIP--EQILGKVSIAVIKGLTYLRE-KHKIMHRDVKPSNILVNSRGEIKLCDFGVS-- 214
Query: 242 GPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 291
G D ++ +GT Y +PE + + +SD++S G+ L+E+ GR
Sbjct: 215 GQLIDS--MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 262
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 118/288 (40%), Gaps = 44/288 (15%)
Query: 80 ATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVK---KLKPEGFQGHKEWL 136
A +F LG+G FG VY Q S ++A+K K + E +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQ---------SKFILALKVLFKAQLEKAGVEHQLR 59
Query: 137 TEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA 196
EV L HPN+++L GY + L+ E+ P G++ L Q LS + A
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTA 114
Query: 197 IGA---AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 253
A L++ H +VI+RD K N+LL + K++DFG + P+ R
Sbjct: 115 TYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----DD 168
Query: 254 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYL 313
+ GT Y PE + K D++S GV+ E L G+ + A Y
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQ 215
Query: 314 SDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 361
+++ R+ T +P A L + L + P RP + EVL
Sbjct: 216 ETYKRISRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 122/280 (43%), Gaps = 48/280 (17%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLK-PEGFQGHKEWLTEVNYLGQLHHP 148
+G+G FG V+KG ID + VVA+K + E ++ E+ L Q
Sbjct: 31 IGKGSFGEVFKG-IDNRT--------QQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSS 81
Query: 149 NLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGP-QPLSWAVRMKVAIGAAKGLTFLH 207
+ K G L+G ++ E++ GS + L R GP A +K + KGL +LH
Sbjct: 82 YVTKYYGSYLKGSKLWIIMEYLGGGSALD-LLRAGPFDEFQIATMLKEIL---KGLDYLH 137
Query: 208 DAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVA 267
+ I+RD KA+N+LL + + KL+DFG+ AG D +GT + APE +
Sbjct: 138 SEKK--IHRDIKAANVLLSEQGDVKLADFGV--AGQLTDTQIKRNTFVGTPFWMAPEVIQ 193
Query: 268 TGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSD---KRKLFRIMD 324
+K+D++S G+ +EL G +P SD R LF I
Sbjct: 194 QSAYDSKADIWSLGITAIELAKG-------------------EPPNSDMHPMRVLFLIPK 234
Query: 325 TK---LGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 361
L G + + + CLN +P RP E+L
Sbjct: 235 NNPPTLVGDFTK----SFKEFIDACLNKDPSFRPTAKELL 270
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 103/211 (48%), Gaps = 16/211 (7%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLT--EVN 140
F +LG+G FG V+ + + S S A+ + A+K LK + T E +
Sbjct: 26 QFELLKVLGQGSFGKVF--LVKKISGSDARQ----LYAMKVLKKATLKVRDRVRTKMERD 79
Query: 141 YLGQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGA 199
L +++HP +VKL Y + E +L L+ +F+ G L F R + + + A
Sbjct: 80 ILVEVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFYLA 134
Query: 200 AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 259
L H +IYRD K NILLD E + KL+DFGL+K + D + GT
Sbjct: 135 ELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCGTVE 192
Query: 260 YAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
Y APE V T +D +SFGV++ E+L+G
Sbjct: 193 YMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 118/288 (40%), Gaps = 44/288 (15%)
Query: 80 ATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVK---KLKPEGFQGHKEWL 136
A +F LG+G FG VY Q S ++A+K K + E +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQ---------SKFILALKVLFKAQLEKAGVEHQLR 56
Query: 137 TEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA 196
EV L HPN+++L GY + L+ E+ P G++ L Q LS + A
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTA 111
Query: 197 IGA---AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 253
A L++ H +VI+RD K N+LL + K++DFG + P+ R
Sbjct: 112 TYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----XX 165
Query: 254 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYL 313
+ GT Y PE + K D++S GV+ E L G+ + A Y
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQ 212
Query: 314 SDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 361
+++ R+ T +P A L + L + P RP + EVL
Sbjct: 213 ETYKRISRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 118/288 (40%), Gaps = 44/288 (15%)
Query: 80 ATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVK---KLKPEGFQGHKEWL 136
A +F LG+G FG VY Q S ++A+K K + E +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQ---------SKFILALKVLFKAQLEKAGVEHQLR 59
Query: 137 TEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA 196
EV L HPN+++L GY + L+ E+ P G++ L Q LS + A
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTA 114
Query: 197 IGA---AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 253
A L++ H +VI+RD K N+LL + K++DFG + P+ R
Sbjct: 115 TYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----XX 168
Query: 254 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYL 313
+ GT Y PE + K D++S GV+ E L G+ + A Y
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQ 215
Query: 314 SDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 361
+++ R+ T +P A L + L + P RP + EVL
Sbjct: 216 ETYKRISRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 103/211 (48%), Gaps = 16/211 (7%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLT--EVN 140
F +LG+G FG V+ + + S S A+ + A+K LK + T E +
Sbjct: 25 QFELLKVLGQGSFGKVF--LVKKISGSDARQ----LYAMKVLKKATLKVRDRVRTKMERD 78
Query: 141 YLGQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGA 199
L +++HP +VKL Y + E +L L+ +F+ G L F R + + + A
Sbjct: 79 ILVEVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFYLA 133
Query: 200 AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 259
L H +IYRD K NILLD E + KL+DFGL+K + D + GT
Sbjct: 134 ELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCGTVE 191
Query: 260 YAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
Y APE V T +D +SFGV++ E+L+G
Sbjct: 192 YMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 25/206 (12%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
LG+G FG VYK +G + A K ++ + + ++++ E+ L HP
Sbjct: 19 LGDGAFGKVYKA---------KNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPY 69
Query: 150 LVKLIGYCLEGENRLLVYEFMPKGSLENHLFR--RGPQPLSWAVRMKVAIGAAKGLTFLH 207
+VKL+G ++ EF P G+++ + RG L+ V + L FLH
Sbjct: 70 IVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRG---LTEPQIQVVCRQMLEALNFLH 126
Query: 208 DAESQVIYRDFKASNILLDAEFNAKLSDFGL-AKAGPTGDRTHVSTQVMGTHGYAAPEYV 266
++I+RD KA N+L+ E + +L+DFG+ AK T + +GT + APE V
Sbjct: 127 S--KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQK---RDSFIGTPYWMAPEVV 181
Query: 267 ATGRLTT-----KSDVYSFGVVLLEL 287
+ K+D++S G+ L+E+
Sbjct: 182 MCETMKDTPYDYKADIWSLGITLIEM 207
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 96/220 (43%), Gaps = 19/220 (8%)
Query: 76 ELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEW 135
++K +F +LG+G FG V+ L+ K + A+K LK + +
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVF--------LAEFKK-TNQFFAIKALKKDVVLMDDDV 61
Query: 136 ---LTEVNYLG-QLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAV 191
+ E L HP L + EN V E++ G L H+ LS A
Sbjct: 62 ECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRAT 121
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
I GL FLH ++YRD K NILLD + + K++DFG+ K GD +
Sbjct: 122 FYAAEI--ILGLQFLH--SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK--T 175
Query: 252 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 291
GT Y APE + + D +SFGV+L E+L G+
Sbjct: 176 NXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 215
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 97/206 (47%), Gaps = 15/206 (7%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH-KEWLTEVNYLGQLHHP 148
+GEG +G V + VA+KK+ P Q + + L E+ L + H
Sbjct: 51 IGEGAYGMVSSAYDHVRKTR---------VAIKKISPFEHQTYCQRTLREIQILLRFRHE 101
Query: 149 NLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRR-GPQPLSWAVRMKVAIGAAKGLTFLH 207
N++ + + ++ + +E L++ Q LS +GL ++H
Sbjct: 102 NVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLKYIH 161
Query: 208 DAESQVIYRDFKASNILLDAEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTHGYAAPEYV 266
A V++RD K SN+L++ + K+ DFGLA+ A P D T T+ + T Y APE +
Sbjct: 162 SA--NVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIM 219
Query: 267 ATGRLTTKS-DVYSFGVVLLELLSGR 291
+ TKS D++S G +L E+LS R
Sbjct: 220 LNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 105/226 (46%), Gaps = 39/226 (17%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVK-----KLKPEGFQGHKEWLT 137
N+R +G+G F K + +H L+ G VAVK +L P Q +
Sbjct: 16 NYRLQKTIGKGNFA---KVKLARHVLT------GREVAVKIIDKTQLNPTSLQ---KLFR 63
Query: 138 EVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA 196
EV + L+HPN+VKL +E E L LV E+ G + ++L G RMK
Sbjct: 64 EVRIMKILNHPNIVKLFE-VIETEKTLYLVMEYASGGEVFDYLVAHG--------RMKEK 114
Query: 197 IGAAK------GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHV 250
AK + + H + +++RD KA N+LLD + N K++DFG + G++
Sbjct: 115 EARAKFRQIVSAVQYCH--QKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDT 172
Query: 251 STQVMGTHGYAAPEYVATGRLTT-KSDVYSFGVVLLELLSGRCAVD 295
G+ YAAPE + + DV+S GV+L L+SG D
Sbjct: 173 ---FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 122/296 (41%), Gaps = 41/296 (13%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQG-HKEWLTEVNYLGQL-HH 147
LG G FG V I+ + K + VAVK LK H+ ++E+ L + HH
Sbjct: 36 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 91
Query: 148 PNLVKLIGYCLE-GENRLLVYEFMPKGSLENHLFRRGPQPLSWAV-------------RM 193
N+V L+G C + G +++ EF G+L +L + + + + +
Sbjct: 92 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLI 151
Query: 194 KVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 253
+ AKG+ FL A + I+RD A NILL + K+ DFGLA+
Sbjct: 152 CYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 209
Query: 254 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPY- 312
+ APE + T +SDV+SFGV+L E+ S +G A PY
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------LG--------ASPYP 252
Query: 313 -LSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 367
+ + R + + P L C + EP RP SE++ L L
Sbjct: 253 GVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 111/237 (46%), Gaps = 20/237 (8%)
Query: 76 ELKTATRN-FRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQ---G 131
E + T+N FR +LG+GGFG V + +G + A KKL+ + + G
Sbjct: 177 ERQPVTKNTFRQYRVLGKGGFGEVCACQVR---------ATGKMYACKKLEKKRIKKRKG 227
Query: 132 HKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRGPQPLSWA 190
L E L +++ +V L Y E ++ L LV M G L+ H++ G A
Sbjct: 228 EAMALNEKQILEKVNSRFVVSL-AYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEA 286
Query: 191 VRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHV 250
+ A GL LH +++YRD K NILLD + ++SD GLA P G
Sbjct: 287 RAVFYAAEICCGLEDLH--RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG---QT 341
Query: 251 STQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVD 307
+GT GY APE V R T D ++ G +L E+++G+ + K I++ V+
Sbjct: 342 IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVE 398
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 123/295 (41%), Gaps = 40/295 (13%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQG-HKEWLTEVNYLGQL-HH 147
LG G FG V I+ + K + VAVK LK H+ ++E+ L + HH
Sbjct: 37 LGRGAFGQV----IEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 92
Query: 148 PNLVKLIGYCLE-GENRLLVYEFMPKGSLENHLFRR-------GPQPL-----SWAVRMK 194
N+V L+G C + G +++ EF G+L +L + P+ L + +
Sbjct: 93 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIX 152
Query: 195 VAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV 254
+ AKG+ FL A + I+RD A NILL + K+ DFGLA+
Sbjct: 153 YSFQVAKGMEFL--ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 255 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPY-- 312
+ APE + T +SDV+SFGV+L E+ S +G A PY
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------LG--------ASPYPG 253
Query: 313 LSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 367
+ + R + + P L C + EP RP SE++ L L
Sbjct: 254 VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 122/293 (41%), Gaps = 38/293 (12%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQG-HKEWLTEVNYLGQL-HH 147
LG G FG V I+ + K + VAVK LK H+ ++E+ L + HH
Sbjct: 35 LGRGAFGQV----IEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 148 PNLVKLIGYCLE-GENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMK----------VA 196
N+V L+G C + G +++ EF G+L +L + + + + K +
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYS 150
Query: 197 IGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMG 256
AKG+ FL A + I+RD A NILL + K+ DFGLA+
Sbjct: 151 FQVAKGMEFL--ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 208
Query: 257 THGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPY--LS 314
+ APE + T +SDV+SFGV+L E+ S +G A PY +
Sbjct: 209 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------LG--------ASPYPGVK 251
Query: 315 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 367
+ R + + P L C + EP RP SE++ L L
Sbjct: 252 IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 304
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 111/237 (46%), Gaps = 20/237 (8%)
Query: 76 ELKTATRN-FRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQ---G 131
E + T+N FR +LG+GGFG V + +G + A KKL+ + + G
Sbjct: 177 ERQPVTKNTFRQYRVLGKGGFGEVCACQVR---------ATGKMYACKKLEKKRIKKRKG 227
Query: 132 HKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRGPQPLSWA 190
L E L +++ +V L Y E ++ L LV M G L+ H++ G A
Sbjct: 228 EAMALNEKQILEKVNSRFVVSL-AYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEA 286
Query: 191 VRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHV 250
+ A GL LH +++YRD K NILLD + ++SD GLA P G
Sbjct: 287 RAVFYAAEICCGLEDLH--RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKG 344
Query: 251 STQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVD 307
+GT GY APE V R T D ++ G +L E+++G+ + K I++ V+
Sbjct: 345 R---VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVE 398
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 107/213 (50%), Gaps = 23/213 (10%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVK----KLKPEGFQGHKEWLTE 138
+F S LG G G V+K KP SG+V+A K ++KP + + E
Sbjct: 10 DFEKISELGAGNGGVVFK--------VSHKP-SGLVMARKLIHLEIKP---AIRNQIIRE 57
Query: 139 VNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIG 198
+ L + + P +V G + E M GSL+ L + G P + KV+I
Sbjct: 58 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIP--EQILGKVSIA 115
Query: 199 AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH 258
KGLT+L + + ++++RD K SNIL+++ KL DFG++ G D ++ + +GT
Sbjct: 116 VIKGLTYLRE-KHKIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDE--MANEFVGTR 170
Query: 259 GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 291
Y +PE + + +SD++S G+ L+E+ GR
Sbjct: 171 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 112/230 (48%), Gaps = 26/230 (11%)
Query: 69 LKAFTFNELKTA---TRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVK--- 122
L+AF + K +F S LG G G V+K KP SG+V+A K
Sbjct: 17 LEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFK--------VSHKP-SGLVMARKLIH 67
Query: 123 -KLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFR 181
++KP + + E+ L + + P +V G + E M GSL+ L +
Sbjct: 68 LEIKP---AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK 124
Query: 182 RGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKA 241
G P + KV+I KGLT+L + + ++++RD K SNIL+++ KL DFG++
Sbjct: 125 AGRIP--EQILGKVSIAVIKGLTYLRE-KHKIMHRDVKPSNILVNSRGEIKLCDFGVS-- 179
Query: 242 GPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 291
G D ++ +GT Y +PE + + +SD++S G+ L+E+ GR
Sbjct: 180 GQLIDS--MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 227
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 100/216 (46%), Gaps = 20/216 (9%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH-KEWLTEVNYLGQL-HH 147
LGEG FG V + + KP + VAVK LK + + + ++E+ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 148 PNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMK------------- 194
N++ L+G C + ++ + KG+L +L R P + ++ +
Sbjct: 101 KNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 195 -VAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 253
A+G+ +L A + I+RD A N+L+ K++DFGLA+ D +T
Sbjct: 161 SCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 254 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 289
+ APE + T +SDV+SFGV++ E+ +
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 114/276 (41%), Gaps = 40/276 (14%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLK-PEGFQGHKEWLTEVNYLGQLHHP 148
+G+G FG V+KG ID + VVA+K + E ++ E+ L Q P
Sbjct: 30 IGKGSFGEVFKG-IDNRTQK--------VVAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 80
Query: 149 NLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHD 208
+ K G L+ ++ E++ GS + L P PL + KGL +LH
Sbjct: 81 YVTKYYGSYLKDTKLWIIMEYLGGGSALDLL---EPGPLDETQIATILREILKGLDYLHS 137
Query: 209 AESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVAT 268
+ I+RD KA+N+LL KL+DFG+ AG D +GT + APE +
Sbjct: 138 EKK--IHRDIKAANVLLSEHGEVKLADFGV--AGQLTDTQIKRNXFVGTPFWMAPEVIKQ 193
Query: 269 GRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTK-- 326
+K+D++S G+ +EL G + L + LF I
Sbjct: 194 SAYDSKADIWSLGITAIELARGEPPHSE----------------LHPMKVLFLIPKNNPP 237
Query: 327 -LGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 361
L G Y + CLN EP RP E+L
Sbjct: 238 TLEGNYSKPLKEFVEA----CLNKEPSFRPTAKELL 269
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 122/293 (41%), Gaps = 38/293 (12%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQG-HKEWLTEVNYLGQL-HH 147
LG G FG V I+ + K + VAVK LK H+ ++E+ L + HH
Sbjct: 35 LGRGAFGQV----IEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 148 PNLVKLIGYCLE-GENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMK----------VA 196
N+V L+G C + G +++ EF G+L +L + + + + K +
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYS 150
Query: 197 IGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMG 256
AKG+ FL A + I+RD A NILL + K+ DFGLA+
Sbjct: 151 FQVAKGMEFL--ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARL 208
Query: 257 THGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPY--LS 314
+ APE + T +SDV+SFGV+L E+ S +G A PY +
Sbjct: 209 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------LG--------ASPYPGVK 251
Query: 315 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 367
+ R + + P L C + EP RP SE++ L L
Sbjct: 252 IDEEFXRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 304
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 17/201 (8%)
Query: 90 LGEGGFGFV-YKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHP 148
LG G FG V Y W Q+ VA+K +K EG E++ E + L H
Sbjct: 32 LGTGQFGVVKYGKWRGQYD-----------VAIKMIK-EGSMSEDEFIEEAKVMMNLSHE 79
Query: 149 NLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHD 208
LV+L G C + ++ E+M G L N+L R +++ + + +L
Sbjct: 80 KLVQLYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLES 138
Query: 209 AESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVAT 268
Q ++RD A N L++ + K+SDFGL++ + T ++ PE +
Sbjct: 139 --KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVR-WSPPEVLMY 195
Query: 269 GRLTTKSDVYSFGVVLLELLS 289
+ ++KSD+++FGV++ E+ S
Sbjct: 196 SKFSSKSDIWAFGVLMWEIYS 216
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 114/281 (40%), Gaps = 37/281 (13%)
Query: 78 KTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEW-- 135
+ F LLG+G FG V + + +G A+K LK E E
Sbjct: 147 RVTMNEFEYLKLLGKGTFGKV---------ILVKEKATGRYYAMKILKKEVIVAKDEVAH 197
Query: 136 -LTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRGPQPLSWAVRM 193
LTE L HP L L Y + +RL V E+ G L HL R A
Sbjct: 198 TLTENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY 256
Query: 194 KVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 253
I +A L +LH +E V+YRD K N++LD + + K++DFGL K G T +
Sbjct: 257 GAEIVSA--LDYLH-SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT-- 311
Query: 254 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYL 313
GT Y APE + D + GVV+ E++ GR Y
Sbjct: 312 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-----------------YN 354
Query: 314 SDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLR 354
D KLF ++ + ++P+ A +L L +PK R
Sbjct: 355 QDHEKLFELILME-EIRFPRTLGPEAKSLLSGLLKKDPKQR 394
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 106/213 (49%), Gaps = 23/213 (10%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVK----KLKPEGFQGHKEWLTE 138
+F S LG G G V+K KP SG+V+A K ++KP + + E
Sbjct: 7 DFEKISELGAGNGGVVFK--------VSHKP-SGLVMARKLIHLEIKP---AIRNQIIRE 54
Query: 139 VNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIG 198
+ L + + P +V G + E M GSL+ L + G P + KV+I
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIP--EQILGKVSIA 112
Query: 199 AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH 258
KGLT+L + + ++++RD K SNIL+++ KL DFG++ G D ++ +GT
Sbjct: 113 VIKGLTYLRE-KHKIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTR 167
Query: 259 GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 291
Y +PE + + +SD++S G+ L+E+ GR
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 99/202 (49%), Gaps = 16/202 (7%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
+G+G G VY + +G VA++++ + + + E+ + + +PN
Sbjct: 28 IGQGASGTVY---------TAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 78
Query: 150 LVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDA 209
+V + L G+ +V E++ GSL + + A + + A L FLH
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQA---LEFLHS- 134
Query: 210 ESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATG 269
+QVI+RD K+ NILL + + KL+DFG A T +++ ST V GT + APE V
Sbjct: 135 -NQVIHRDIKSDNILLGMDGSVKLTDFGFC-AQITPEQSKRSTMV-GTPYWMAPEVVTRK 191
Query: 270 RLTTKSDVYSFGVVLLELLSGR 291
K D++S G++ +E++ G
Sbjct: 192 AYGPKVDIWSLGIMAIEMIEGE 213
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 106/213 (49%), Gaps = 23/213 (10%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVK----KLKPEGFQGHKEWLTE 138
+F S LG G G V+K KP SG+V+A K ++KP + + E
Sbjct: 7 DFEKISELGAGNGGVVFK--------VSHKP-SGLVMARKLIHLEIKP---AIRNQIIRE 54
Query: 139 VNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIG 198
+ L + + P +V G + E M GSL+ L + G P + KV+I
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIP--EQILGKVSIA 112
Query: 199 AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH 258
KGLT+L + + ++++RD K SNIL+++ KL DFG++ G D ++ +GT
Sbjct: 113 VIKGLTYLRE-KHKIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTR 167
Query: 259 GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 291
Y +PE + + +SD++S G+ L+E+ GR
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 106/213 (49%), Gaps = 23/213 (10%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVK----KLKPEGFQGHKEWLTE 138
+F S LG G G V+K KP SG+V+A K ++KP + + E
Sbjct: 7 DFEKISELGAGNGGVVFK--------VSHKP-SGLVMARKLIHLEIKP---AIRNQIIRE 54
Query: 139 VNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIG 198
+ L + + P +V G + E M GSL+ L + G P + KV+I
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIP--EQILGKVSIA 112
Query: 199 AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH 258
KGLT+L + + ++++RD K SNIL+++ KL DFG++ G D ++ +GT
Sbjct: 113 VIKGLTYLRE-KHKIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTR 167
Query: 259 GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 291
Y +PE + + +SD++S G+ L+E+ GR
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 99/204 (48%), Gaps = 23/204 (11%)
Query: 90 LGEGGFGFV-YKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHP 148
LG G FG V Y W Q+ VA+K +K EG E++ E + L H
Sbjct: 12 LGTGQFGVVKYGKWRGQYD-----------VAIKMIK-EGSMSEDEFIEEAKVMMNLSHE 59
Query: 149 NLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHD 208
LV+L G C + ++ E+M G L N+L R +++ + + +L
Sbjct: 60 KLVQLYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLES 118
Query: 209 AESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG---YAAPEY 265
Q ++RD A N L++ + K+SDFGL++ D + S+ +G+ ++ PE
Sbjct: 119 --KQFLHRDLAARNCLVNDQGVVKVSDFGLSRY--VLDDEYTSS--VGSKFPVRWSPPEV 172
Query: 266 VATGRLTTKSDVYSFGVVLLELLS 289
+ + ++KSD+++FGV++ E+ S
Sbjct: 173 LMYSKFSSKSDIWAFGVLMWEIYS 196
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 114/281 (40%), Gaps = 37/281 (13%)
Query: 78 KTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEW-- 135
+ F LLG+G FG V + + +G A+K LK E E
Sbjct: 144 RVTMNEFEYLKLLGKGTFGKV---------ILVKEKATGRYYAMKILKKEVIVAKDEVAH 194
Query: 136 -LTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRGPQPLSWAVRM 193
LTE L HP L L Y + +RL V E+ G L HL R A
Sbjct: 195 TLTENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY 253
Query: 194 KVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 253
I +A L +LH +E V+YRD K N++LD + + K++DFGL K G T +
Sbjct: 254 GAEIVSA--LDYLH-SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT-- 308
Query: 254 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYL 313
GT Y APE + D + GVV+ E++ GR Y
Sbjct: 309 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-----------------YN 351
Query: 314 SDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLR 354
D KLF ++ + ++P+ A +L L +PK R
Sbjct: 352 QDHEKLFELILME-EIRFPRTLGPEAKSLLSGLLKKDPKQR 391
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 100/216 (46%), Gaps = 20/216 (9%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH-KEWLTEVNYLGQL-HH 147
LGEG FG V + + KP + VAVK LK + + + ++E+ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 148 PNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMK------------- 194
N++ L+G C + ++ + KG+L +L R P + ++ +
Sbjct: 101 KNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 195 -VAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 253
A+G+ +L A + I+RD A N+L+ K++DFGLA+ D +T
Sbjct: 161 SCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 254 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 289
+ APE + T +SDV+SFGV++ E+ +
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 102/207 (49%), Gaps = 17/207 (8%)
Query: 87 DSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH-KEWLTEVNYLGQL 145
D LG G FG V +G + VA+K LK + +E + E + QL
Sbjct: 15 DIELGCGNFGSVRQGVYRMRK-------KQIDVAIKVLKQGTEKADTEEMMREAQIMHQL 67
Query: 146 HHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLF-RRGPQPLSWAVRMKVAIGAAKGLT 204
+P +V+LIG C + E +LV E G L L +R P+S + + + G+
Sbjct: 68 DNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQV--SMGMK 124
Query: 205 FLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH--GYAA 262
+L E ++RD A N+LL AK+SDFGL+KA D ++ + + G + A
Sbjct: 125 YLE--EKNFVHRDLAARNVLLVNRHYAKISDFGLSKA-LGADDSYYTARSAGKWPLKWYA 181
Query: 263 PEYVATGRLTTKSDVYSFGVVLLELLS 289
PE + + +++SDV+S+GV + E LS
Sbjct: 182 PECINFRKFSSRSDVWSYGVTMWEALS 208
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 17/201 (8%)
Query: 90 LGEGGFGFV-YKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHP 148
LG G FG V Y W Q+ VA+K +K EG E++ E + L H
Sbjct: 32 LGTGQFGVVKYGKWRGQYD-----------VAIKMIK-EGSMSEDEFIEEAKVMMNLSHE 79
Query: 149 NLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHD 208
LV+L G C + ++ E+M G L N+L R +++ + + +L
Sbjct: 80 KLVQLYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLES 138
Query: 209 AESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVAT 268
Q ++RD A N L++ + K+SDFGL++ + T ++ PE +
Sbjct: 139 --KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR-WSPPEVLMY 195
Query: 269 GRLTTKSDVYSFGVVLLELLS 289
+ ++KSD+++FGV++ E+ S
Sbjct: 196 SKFSSKSDIWAFGVLMWEIYS 216
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 92/183 (50%), Gaps = 13/183 (7%)
Query: 119 VAVKKLKPEGFQ-GHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 177
VA+K++ E Q E L E+ + Q HHPN+V + + LV + + GS+ +
Sbjct: 43 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLD 102
Query: 178 ---HLFRRGPQP---LSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNA 231
H+ +G L + + +GL +LH ++ I+RD KA NILL + +
Sbjct: 103 IIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH--KNGQIHRDVKAGNILLGEDGSV 160
Query: 232 KLSDFGLAKAGPTG---DRTHVSTQVMGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLEL 287
+++DFG++ TG R V +GT + APE + R K+D++SFG+ +EL
Sbjct: 161 QIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIEL 220
Query: 288 LSG 290
+G
Sbjct: 221 ATG 223
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 106/213 (49%), Gaps = 23/213 (10%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVK----KLKPEGFQGHKEWLTE 138
+F S LG G G V+K KP SG+V+A K ++KP + + E
Sbjct: 7 DFEKISELGAGNGGVVFK--------VSHKP-SGLVMARKLIHLEIKP---AIRNQIIRE 54
Query: 139 VNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIG 198
+ L + + P +V G + E M GSL+ L + G P + KV+I
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIP--EQILGKVSIA 112
Query: 199 AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH 258
KGLT+L + + ++++RD K SNIL+++ KL DFG++ G D ++ +GT
Sbjct: 113 VIKGLTYLRE-KHKIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTR 167
Query: 259 GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 291
Y +PE + + +SD++S G+ L+E+ GR
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 106/213 (49%), Gaps = 23/213 (10%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVK----KLKPEGFQGHKEWLTE 138
+F S LG G G V+K KP SG+V+A K ++KP + + E
Sbjct: 7 DFEKISELGAGNGGVVFK--------VSHKP-SGLVMARKLIHLEIKP---AIRNQIIRE 54
Query: 139 VNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIG 198
+ L + + P +V G + E M GSL+ L + G P + KV+I
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIP--EQILGKVSIA 112
Query: 199 AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH 258
KGLT+L + + ++++RD K SNIL+++ KL DFG++ G D ++ +GT
Sbjct: 113 VIKGLTYLRE-KHKIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTR 167
Query: 259 GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 291
Y +PE + + +SD++S G+ L+E+ GR
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 101/209 (48%), Gaps = 32/209 (15%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
+GEG G V ++H+ G VAVKK+ Q + EV + HH N
Sbjct: 53 IGEGSTGIVCIA-TEKHT--------GKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDN 103
Query: 150 LVKLIGYCLEGENRLLVYEFMPKGSLENHL--FRRGPQPLSWAVRMKVAIGAAKGLTFLH 207
+V + L G+ +V EF+ G+L + + R + ++ V + + L++LH
Sbjct: 104 VVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----TVCLSVLRALSYLH 158
Query: 208 DAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV------MGTHGYA 261
+ VI+RD K+ +ILL ++ KLSDFG VS +V +GT +
Sbjct: 159 N--QGVIHRDIKSDSILLTSDGRIKLSDFGFC--------AQVSKEVPKRKXLVGTPYWM 208
Query: 262 APEYVATGRLTTKSDVYSFGVVLLELLSG 290
APE ++ T+ D++S G++++E++ G
Sbjct: 209 APEVISRLPYGTEVDIWSLGIMVIEMIDG 237
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 112/230 (48%), Gaps = 26/230 (11%)
Query: 69 LKAFTFNELKTA---TRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVK--- 122
L+AF + K +F S LG G G V+K KP SG+V+A K
Sbjct: 9 LEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFK--------VSHKP-SGLVMARKLIH 59
Query: 123 -KLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFR 181
++KP + + E+ L + + P +V G + E M GSL+ L +
Sbjct: 60 LEIKP---AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK 116
Query: 182 RGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKA 241
G P + KV+I KGLT+L + + ++++RD K SNIL+++ KL DFG++
Sbjct: 117 AGRIP--EQILGKVSIAVIKGLTYLRE-KHKIMHRDVKPSNILVNSRGEIKLCDFGVS-- 171
Query: 242 GPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 291
G D ++ +GT Y +PE + + +SD++S G+ L+E+ GR
Sbjct: 172 GQLIDS--MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 219
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 114/276 (41%), Gaps = 40/276 (14%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLK-PEGFQGHKEWLTEVNYLGQLHHP 148
+G+G FG V+KG ID + VVA+K + E ++ E+ L Q P
Sbjct: 15 IGKGSFGEVFKG-IDNRTQK--------VVAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 65
Query: 149 NLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHD 208
+ K G L+ ++ E++ GS + L P PL + KGL +LH
Sbjct: 66 YVTKYYGSYLKDTKLWIIMEYLGGGSALDLL---EPGPLDETQIATILREILKGLDYLHS 122
Query: 209 AESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVAT 268
+ I+RD KA+N+LL KL+DFG+ AG D +GT + APE +
Sbjct: 123 EKK--IHRDIKAANVLLSEHGEVKLADFGV--AGQLTDTQIKRNXFVGTPFWMAPEVIKQ 178
Query: 269 GRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTK-- 326
+K+D++S G+ +EL G + L + LF I
Sbjct: 179 SAYDSKADIWSLGITAIELARGEPPHSE----------------LHPMKVLFLIPKNNPP 222
Query: 327 -LGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 361
L G Y + CLN EP RP E+L
Sbjct: 223 TLEGNYSKPLKEFVEA----CLNKEPSFRPTAKELL 254
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 17/201 (8%)
Query: 90 LGEGGFGFV-YKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHP 148
LG G FG V Y W Q+ VA+K +K EG E++ E + L H
Sbjct: 17 LGTGQFGVVKYGKWRGQYD-----------VAIKMIK-EGSMSEDEFIEEAKVMMNLSHE 64
Query: 149 NLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHD 208
LV+L G C + ++ E+M G L N+L R +++ + + +L
Sbjct: 65 KLVQLYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLES 123
Query: 209 AESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVAT 268
Q ++RD A N L++ + K+SDFGL++ + T ++ PE +
Sbjct: 124 --KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVR-WSPPEVLMY 180
Query: 269 GRLTTKSDVYSFGVVLLELLS 289
+ ++KSD+++FGV++ E+ S
Sbjct: 181 SKFSSKSDIWAFGVLMWEIYS 201
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 114/276 (41%), Gaps = 40/276 (14%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLK-PEGFQGHKEWLTEVNYLGQLHHP 148
+G+G FG V+KG ID + VVA+K + E ++ E+ L Q P
Sbjct: 15 IGKGSFGEVFKG-IDNRTQK--------VVAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 65
Query: 149 NLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHD 208
+ K G L+ ++ E++ GS + L P PL + KGL +LH
Sbjct: 66 YVTKYYGSYLKDTKLWIIMEYLGGGSALDLL---EPGPLDETQIATILREILKGLDYLHS 122
Query: 209 AESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVAT 268
+ I+RD KA+N+LL KL+DFG+ AG D +GT + APE +
Sbjct: 123 EKK--IHRDIKAANVLLSEHGEVKLADFGV--AGQLTDTQIKRNTFVGTPFWMAPEVIKQ 178
Query: 269 GRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTK-- 326
+K+D++S G+ +EL G + L + LF I
Sbjct: 179 SAYDSKADIWSLGITAIELARGEPPHSE----------------LHPMKVLFLIPKNNPP 222
Query: 327 -LGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 361
L G Y + CLN EP RP E+L
Sbjct: 223 TLEGNYSKPLKEFVEA----CLNKEPSFRPTAKELL 254
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 99/204 (48%), Gaps = 23/204 (11%)
Query: 90 LGEGGFGFV-YKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHP 148
LG G FG V Y W Q+ VA+K +K EG E++ E + L H
Sbjct: 16 LGTGQFGVVKYGKWRGQYD-----------VAIKMIK-EGSMSEDEFIEEAKVMMNLSHE 63
Query: 149 NLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHD 208
LV+L G C + ++ E+M G L N+L R +++ + + +L
Sbjct: 64 KLVQLYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLES 122
Query: 209 AESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG---YAAPEY 265
Q ++RD A N L++ + K+SDFGL++ D + S+ +G+ ++ PE
Sbjct: 123 --KQFLHRDLAARNCLVNDQGVVKVSDFGLSRY--VLDDEYTSS--VGSKFPVRWSPPEV 176
Query: 266 VATGRLTTKSDVYSFGVVLLELLS 289
+ + ++KSD+++FGV++ E+ S
Sbjct: 177 LMYSKFSSKSDIWAFGVLMWEIYS 200
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 92/183 (50%), Gaps = 13/183 (7%)
Query: 119 VAVKKLKPEGFQ-GHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 177
VA+K++ E Q E L E+ + Q HHPN+V + + LV + + GS+ +
Sbjct: 38 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLD 97
Query: 178 ---HLFRRGPQP---LSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNA 231
H+ +G L + + +GL +LH ++ I+RD KA NILL + +
Sbjct: 98 IIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH--KNGQIHRDVKAGNILLGEDGSV 155
Query: 232 KLSDFGLAKAGPTG---DRTHVSTQVMGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLEL 287
+++DFG++ TG R V +GT + APE + R K+D++SFG+ +EL
Sbjct: 156 QIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIEL 215
Query: 288 LSG 290
+G
Sbjct: 216 ATG 218
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 94/220 (42%), Gaps = 17/220 (7%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH---KEWLTEV 139
+F+ +LLG+G F VY+ +G+ VA+K + + + EV
Sbjct: 12 DFKVGNLLGKGSFAGVYRA---------ESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEV 62
Query: 140 NYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGA 199
QL HP++++L Y + LV E G + +L R +P S
Sbjct: 63 KIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNR-VKPFSENEARHFMHQI 121
Query: 200 AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 259
G+ +LH +++RD SN+LL N K++DFGLA H + + GT
Sbjct: 122 ITGMLYLH--SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGTPN 177
Query: 260 YAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKV 299
Y +PE +SDV+S G + LL GR D V
Sbjct: 178 YISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTV 217
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 104/208 (50%), Gaps = 19/208 (9%)
Query: 87 DSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQ--GHKEWLTEVNYLGQ 144
D LG G FG V +G + VA+K LK +G + +E + E + Q
Sbjct: 341 DIELGCGNFGSVRQGVYRMRK-------KQIDVAIKVLK-QGTEKADTEEMMREAQIMHQ 392
Query: 145 LHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLF-RRGPQPLSWAVRMKVAIGAAKGL 203
L +P +V+LIG C + E +LV E G L L +R P+S + + + G+
Sbjct: 393 LDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQV--SMGM 449
Query: 204 TFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH--GYA 261
+L E ++R+ A N+LL AK+SDFGL+KA D ++ + + G +
Sbjct: 450 KYLE--EKNFVHRNLAARNVLLVNRHYAKISDFGLSKA-LGADDSYYTARSAGKWPLKWY 506
Query: 262 APEYVATGRLTTKSDVYSFGVVLLELLS 289
APE + + +++SDV+S+GV + E LS
Sbjct: 507 APECINFRKFSSRSDVWSYGVTMWEALS 534
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 99/204 (48%), Gaps = 23/204 (11%)
Query: 90 LGEGGFGFV-YKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHP 148
LG G FG V Y W Q+ VA+K +K EG E++ E + L H
Sbjct: 17 LGTGQFGVVKYGKWRGQYD-----------VAIKMIK-EGSMSEDEFIEEAKVMMNLSHE 64
Query: 149 NLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHD 208
LV+L G C + ++ E+M G L N+L R +++ + + +L
Sbjct: 65 KLVQLYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLES 123
Query: 209 AESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG---YAAPEY 265
Q ++RD A N L++ + K+SDFGL++ D + S+ +G+ ++ PE
Sbjct: 124 --KQFLHRDLAARNCLVNDQGVVKVSDFGLSRY--VLDDEYTSS--VGSKFPVRWSPPEV 177
Query: 266 VATGRLTTKSDVYSFGVVLLELLS 289
+ + ++KSD+++FGV++ E+ S
Sbjct: 178 LMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 113/281 (40%), Gaps = 37/281 (13%)
Query: 78 KTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEW-- 135
+ F LLG+G FG V + + +G A+K LK E E
Sbjct: 6 RVTMNEFEYLKLLGKGTFGKV---------ILVKEKATGRYYAMKILKKEVIVAKDEVAH 56
Query: 136 -LTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRGPQPLSWAVRM 193
LTE L HP L L Y + +RL V E+ G L HL R A
Sbjct: 57 TLTENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY 115
Query: 194 KVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 253
I +A L +LH +E V+YRD K N++LD + + K++DFGL K G T
Sbjct: 116 GAEIVSA--LDYLH-SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKX 170
Query: 254 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYL 313
GT Y APE + D + GVV+ E++ GR Y
Sbjct: 171 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-----------------YN 213
Query: 314 SDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLR 354
D KLF ++ + ++P+ A +L L +PK R
Sbjct: 214 QDHEKLFELILME-EIRFPRTLGPEAKSLLSGLLKKDPKQR 253
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 95/205 (46%), Gaps = 22/205 (10%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKE-WLTEVNYLGQLHHP 148
+GEG FG V++G +SP P M VA+K K +E +L E + Q HP
Sbjct: 18 IGEGQFGDVHQG----IYMSPENPA--MAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 71
Query: 149 NLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHD 208
++VKLIG E ++ E G L + L R L A + A + L +L
Sbjct: 72 HIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKFS-LDLASLILYAYQLSTALAYLES 129
Query: 209 AESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG-----YAAP 263
+ ++RD A N+L+ A KL DFGL++ ST + G + AP
Sbjct: 130 --KRFVHRDIAARNVLVSATDCVKLGDFGLSRY------MEDSTYYKASKGKLPIKWMAP 181
Query: 264 EYVATGRLTTKSDVYSFGVVLLELL 288
E + R T+ SDV+ FGV + E+L
Sbjct: 182 ESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 115/276 (41%), Gaps = 40/276 (14%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLT-EVNYLGQLHHP 148
+G+G FG V+KG ID + VVA+K + E + E + E+ L Q P
Sbjct: 35 IGKGSFGEVFKG-IDNRTQK--------VVAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 85
Query: 149 NLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHD 208
+ K G L+ ++ E++ GS + L P PL + KGL +LH
Sbjct: 86 YVTKYYGSYLKDTKLWIIMEYLGGGSALDLL---EPGPLDETQIATILREILKGLDYLHS 142
Query: 209 AESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVAT 268
+ I+RD KA+N+LL KL+DFG+ AG D +GT + APE +
Sbjct: 143 EKK--IHRDIKAANVLLSEHGEVKLADFGV--AGQLTDTQIKRNTFVGTPFWMAPEVIKQ 198
Query: 269 GRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTK-- 326
+K+D++S G+ +EL G + L + LF I
Sbjct: 199 SAYDSKADIWSLGITAIELARGEPPHSE----------------LHPMKVLFLIPKNNPP 242
Query: 327 -LGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 361
L G Y + CLN EP RP E+L
Sbjct: 243 TLEGNYSKPLKEFVEA----CLNKEPSFRPTAKELL 274
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 93/200 (46%), Gaps = 12/200 (6%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKE-WLTEVNYLGQLHHP 148
+GEG FG V++G +SP P M VA+K K +E +L E + Q HP
Sbjct: 18 IGEGQFGDVHQG----IYMSPENPA--MAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 71
Query: 149 NLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHD 208
++VKLIG E ++ E G L + L R L A + A + L +L
Sbjct: 72 HIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKFS-LDLASLILYAYQLSTALAYLES 129
Query: 209 AESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVAT 268
+ ++RD A N+L+ + KL DFGL++ S + + APE +
Sbjct: 130 --KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIK-WMAPESINF 186
Query: 269 GRLTTKSDVYSFGVVLLELL 288
R T+ SDV+ FGV + E+L
Sbjct: 187 RRFTSASDVWMFGVCMWEIL 206
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 95/205 (46%), Gaps = 22/205 (10%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKE-WLTEVNYLGQLHHP 148
+GEG FG V++G +SP P M VA+K K +E +L E + Q HP
Sbjct: 398 IGEGQFGDVHQGIY----MSPENPA--MAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 451
Query: 149 NLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHD 208
++VKLIG E ++ E G L + L R L A + A + L +L
Sbjct: 452 HIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKFS-LDLASLILYAYQLSTALAYLES 509
Query: 209 AESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG-----YAAP 263
+ ++RD A N+L+ A KL DFGL++ ST + G + AP
Sbjct: 510 --KRFVHRDIAARNVLVSATDCVKLGDFGLSRY------MEDSTYYKASKGKLPIKWMAP 561
Query: 264 EYVATGRLTTKSDVYSFGVVLLELL 288
E + R T+ SDV+ FGV + E+L
Sbjct: 562 ESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 113/281 (40%), Gaps = 37/281 (13%)
Query: 78 KTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEW-- 135
+ F LLG+G FG V + + +G A+K LK E E
Sbjct: 4 RVTMNEFEYLKLLGKGTFGKV---------ILVKEKATGRYYAMKILKKEVIVAKDEVAH 54
Query: 136 -LTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRGPQPLSWAVRM 193
LTE L HP L L Y + +RL V E+ G L HL R A
Sbjct: 55 TLTENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY 113
Query: 194 KVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 253
I +A L +LH +E V+YRD K N++LD + + K++DFGL K G T
Sbjct: 114 GAEIVSA--LDYLH-SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKX 168
Query: 254 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYL 313
GT Y APE + D + GVV+ E++ GR Y
Sbjct: 169 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-----------------YN 211
Query: 314 SDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLR 354
D KLF ++ + ++P+ A +L L +PK R
Sbjct: 212 QDHEKLFELILME-EIRFPRTLGPEAKSLLSGLLKKDPKQR 251
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 113/281 (40%), Gaps = 37/281 (13%)
Query: 78 KTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEW-- 135
+ F LLG+G FG V + + +G A+K LK E E
Sbjct: 5 RVTMNEFEYLKLLGKGTFGKV---------ILVKEKATGRYYAMKILKKEVIVAKDEVAH 55
Query: 136 -LTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRGPQPLSWAVRM 193
LTE L HP L L Y + +RL V E+ G L HL R A
Sbjct: 56 TLTENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY 114
Query: 194 KVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 253
I +A L +LH +E V+YRD K N++LD + + K++DFGL K G T
Sbjct: 115 GAEIVSA--LDYLH-SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKX 169
Query: 254 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYL 313
GT Y APE + D + GVV+ E++ GR Y
Sbjct: 170 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-----------------YN 212
Query: 314 SDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLR 354
D KLF ++ + ++P+ A +L L +PK R
Sbjct: 213 QDHEKLFELILME-EIRFPRTLGPEAKSLLSGLLKKDPKQR 252
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 95/205 (46%), Gaps = 22/205 (10%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKE-WLTEVNYLGQLHHP 148
+GEG FG V++G +SP P M VA+K K +E +L E + Q HP
Sbjct: 18 IGEGQFGDVHQG----IYMSPENPA--MAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 71
Query: 149 NLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHD 208
++VKLIG E ++ E G L + L R L A + A + L +L
Sbjct: 72 HIVKLIGVITENPV-WIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLES 129
Query: 209 AESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG-----YAAP 263
+ ++RD A N+L+ + KL DFGL++ ST + G + AP
Sbjct: 130 --KRFVHRDIAARNVLVSSNDCVKLGDFGLSRY------MEDSTYYKASKGKLPIKWMAP 181
Query: 264 EYVATGRLTTKSDVYSFGVVLLELL 288
E + R T+ SDV+ FGV + E+L
Sbjct: 182 ESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 97/218 (44%), Gaps = 21/218 (9%)
Query: 78 KTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEW-- 135
+ NF +LG+G FG V + + +G + AVK LK + +
Sbjct: 19 RLGIDNFEFIRVLGKGSFGKVMLARVKE---------TGDLYAVKVLKKDVILQDDDVEC 69
Query: 136 -LTEVNYLG-QLHHPNLVKLIGYCLEGENRLL-VYEFMPKGSLENHLFRRGPQPLSWAVR 192
+TE L +HP L +L C + +RL V EF+ G L H+ + + A
Sbjct: 70 TMTEKRILSLARNHPFLTQLFC-CFQTPDRLFFVMEFVNGGDLMFHI--QKSRRFDEARA 126
Query: 193 MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVST 252
A L FLHD +IYRD K N+LLD E + KL+DFG+ K G T +
Sbjct: 127 RFYAAEIISALMFLHD--KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVT--TA 182
Query: 253 QVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
GT Y APE + D ++ GV+L E+L G
Sbjct: 183 TFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCG 220
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 115/274 (41%), Gaps = 45/274 (16%)
Query: 40 LPIPPSKEKGNSE--------------SLPTPKSEGEILSSSNLKAFTFNELKTATRNFR 85
+P+PP +GN E P K+ I N N + +F
Sbjct: 289 VPVPPEGSEGNEELRQKFERAKIGQGTKAPEEKTANTISKFDN----NGNRDRMKLTDFN 344
Query: 86 PDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEW---LTEVNYL 142
+LG+G FG V + + G+ + AVK LK + + + E L
Sbjct: 345 FLMVLGKGSFGKV---------MLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVL 395
Query: 143 GQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRG----PQPLSWAVRMKVAI 197
P + + C + +RL V E++ G L H+ + G P + +A + +
Sbjct: 396 ALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAI-- 453
Query: 198 GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 257
GL FL +IYRD K N++LD+E + K++DFG+ K T + GT
Sbjct: 454 ----GLFFLQ--SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT--TKXFCGT 505
Query: 258 HGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 291
Y APE +A D ++FGV+L E+L+G+
Sbjct: 506 PDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 539
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 17/201 (8%)
Query: 90 LGEGGFGFV-YKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHP 148
LG G FG V Y W Q+ VA+K +K EG E++ E + L H
Sbjct: 23 LGTGQFGVVKYGKWRGQYD-----------VAIKMIK-EGSMSEDEFIEEAKVMMNLSHE 70
Query: 149 NLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHD 208
LV+L G C + ++ E+M G L N+L R +++ + + +L
Sbjct: 71 KLVQLYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLES 129
Query: 209 AESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVAT 268
Q ++RD A N L++ + K+SDFGL++ + T ++ PE +
Sbjct: 130 --KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR-WSPPEVLMY 186
Query: 269 GRLTTKSDVYSFGVVLLELLS 289
+ ++KSD+++FGV++ E+ S
Sbjct: 187 SKFSSKSDIWAFGVLMWEIYS 207
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 102/230 (44%), Gaps = 29/230 (12%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWL-TEVNY 141
N +LG G FG V ++ + +K G + VAVK LK + +E L +E+
Sbjct: 46 NLEFGKVLGSGAFGKV----MNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKM 101
Query: 142 LGQL-HHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQ--------------- 185
+ QL H N+V L+G C L++E+ G L N+L + +
Sbjct: 102 MTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLE 161
Query: 186 ------PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLA 239
L++ + A AKG+ FL ++RD A N+L+ K+ DFGLA
Sbjct: 162 EEEDLNVLTFEDLLCFAYQVAKGMEFLEF--KSCVHRDLAARNVLVTHGKVVKICDFGLA 219
Query: 240 KAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 289
+ + V + APE + G T KSDV+S+G++L E+ S
Sbjct: 220 RDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 105/221 (47%), Gaps = 29/221 (13%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYL 142
N+R +G+G F K + +H L+ K + ++ +L Q + EV +
Sbjct: 15 NYRLLKTIGKGNFA---KVKLARHILT-GKEVAVRIIDKTQLNSSSLQ---KLFREVRIM 67
Query: 143 GQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAK 201
L+HPN+VKL +E E L LV E+ G + ++L G RMK AK
Sbjct: 68 KVLNHPNIVKLFE-VIETEKTLYLVMEYASGGEVFDYLVAHG--------RMKEKEARAK 118
Query: 202 ------GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVM 255
+ + H + +++RD KA N+LLDA+ N K++DFG + G++ +
Sbjct: 119 FRQIVSAVQYCH--QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL---DEFC 173
Query: 256 GTHGYAAPEYVATGRLTT-KSDVYSFGVVLLELLSGRCAVD 295
G+ YAAPE + + DV+S GV+L L+SG D
Sbjct: 174 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 106/226 (46%), Gaps = 39/226 (17%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVK-----KLKPEGFQGHKEWLT 137
N+R +G+G F K + +H L+ G VA+K +L P Q +
Sbjct: 13 NYRLLKTIGKGNFA---KVKLARHILT------GREVAIKIIDKTQLNPTSLQ---KLFR 60
Query: 138 EVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA 196
EV + L+HPN+VKL +E E L L+ E+ G + ++L G RMK
Sbjct: 61 EVRIMKILNHPNIVKLFE-VIETEKTLYLIMEYASGGEVFDYLVAHG--------RMKEK 111
Query: 197 IGAAK------GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHV 250
+K + + H + ++++RD KA N+LLDA+ N K++DFG + G +
Sbjct: 112 EARSKFRQIVSAVQYCH--QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDT 169
Query: 251 STQVMGTHGYAAPEYVATGRLTT-KSDVYSFGVVLLELLSGRCAVD 295
G+ YAAPE + + DV+S GV+L L+SG D
Sbjct: 170 ---FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 212
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 89/180 (49%), Gaps = 12/180 (6%)
Query: 119 VAVKKLKPEGFQGHKEWLT---EVNYLGQLHHPNLVKLI----GYCLEGENRLLVYEFMP 171
VAVK L+ + + +L E L+HP +V + G +V E++
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVD 99
Query: 172 KGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNA 231
+L + + GP A+ +V A + L F H ++ +I+RD K +NIL+ A
Sbjct: 100 GVTLRDIVHTEGPMTPKRAI--EVIADACQALNFSH--QNGIIHRDVKPANILISATNAV 155
Query: 232 KLSDFGLAKA-GPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
K+ DFG+A+A +G+ + V+GT Y +PE + +SDVYS G VL E+L+G
Sbjct: 156 KVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 99/203 (48%), Gaps = 18/203 (8%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
+G+G G VY + +G VA++++ + + + E+ + + +PN
Sbjct: 28 IGQGASGTVY---------TAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 78
Query: 150 LVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDA 209
+V + L G+ +V E++ GSL + + A + + A L FLH
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQA---LEFLHS- 134
Query: 210 ESQVIYRDFKASNILLDAEFNAKLSDFGL-AKAGPTGDRTHVSTQVMGTHGYAAPEYVAT 268
+QVI+RD K+ NILL + + KL+DFG A+ P + ++++GT + APE V
Sbjct: 135 -NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSEMVGTPYWMAPEVVTR 190
Query: 269 GRLTTKSDVYSFGVVLLELLSGR 291
K D++S G++ +E++ G
Sbjct: 191 KAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 104/223 (46%), Gaps = 33/223 (14%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH--KEWLTEVN 140
N+R +G+G F K + +H L+ G VAVK + ++ EV
Sbjct: 15 NYRLLKTIGKGNFA---KVKLARHILT------GKEVAVKIIDKTQLNSSSLQKLFREVR 65
Query: 141 YLGQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGA 199
+ L+HPN+VKL +E E L LV E+ G + ++L G RMK
Sbjct: 66 IMKVLNHPNIVKLFE-VIETEKTLYLVMEYASGGEVFDYLVAHG--------RMKEKEAR 116
Query: 200 AK------GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 253
AK + + H + +++RD KA N+LLDA+ N K++DFG + G++
Sbjct: 117 AKFRQIVSAVQYCH--QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT--- 171
Query: 254 VMGTHGYAAPEYVATGRLTT-KSDVYSFGVVLLELLSGRCAVD 295
G+ YAAPE + + DV+S GV+L L+SG D
Sbjct: 172 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 104/223 (46%), Gaps = 33/223 (14%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH--KEWLTEVN 140
N+R +G+G F K + +H L+ G VAVK + ++ EV
Sbjct: 15 NYRLLKTIGKGNFA---KVKLARHILT------GKEVAVKIIDKTQLNSSSLQKLFREVR 65
Query: 141 YLGQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGA 199
+ L+HPN+VKL +E E L LV E+ G + ++L G RMK
Sbjct: 66 IMKVLNHPNIVKLFE-VIETEKTLYLVMEYASGGEVFDYLVAHG--------RMKEKEAR 116
Query: 200 AK------GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 253
AK + + H + +++RD KA N+LLDA+ N K++DFG + G++
Sbjct: 117 AKFRQIVSAVQYCH--QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT--- 171
Query: 254 VMGTHGYAAPEYVATGRLTT-KSDVYSFGVVLLELLSGRCAVD 295
G+ YAAPE + + DV+S GV+L L+SG D
Sbjct: 172 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 95/205 (46%), Gaps = 22/205 (10%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKE-WLTEVNYLGQLHHP 148
+GEG FG V++G +SP P M VA+K K +E +L E + Q HP
Sbjct: 398 IGEGQFGDVHQGIY----MSPENPA--MAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 451
Query: 149 NLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHD 208
++VKLIG E ++ E G L + L R L A + A + L +L
Sbjct: 452 HIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKFS-LDLASLILYAYQLSTALAYLES 509
Query: 209 AESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG-----YAAP 263
+ ++RD A N+L+ + KL DFGL++ ST + G + AP
Sbjct: 510 --KRFVHRDIAARNVLVSSNDCVKLGDFGLSRY------MEDSTYYKASKGKLPIKWMAP 561
Query: 264 EYVATGRLTTKSDVYSFGVVLLELL 288
E + R T+ SDV+ FGV + E+L
Sbjct: 562 ESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 85/178 (47%), Gaps = 8/178 (4%)
Query: 145 LHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLT 204
L+H N+VK G+ EG + L E+ G L + + P A R + A G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV 118
Query: 205 FLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPE 264
+LH + +RD K N+LLD N K+SDFGLA +R + ++ GT Y APE
Sbjct: 119 YLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 265 YVATGRLTTK-SDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW--AKPYLSDKRKL 319
+ + DV+S G+VL +L+G D+ Q DW K YL+ +K+
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKKI 233
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 98/202 (48%), Gaps = 16/202 (7%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
+G+G G VY + +G VA++++ + + + E+ + + +PN
Sbjct: 28 IGQGASGTVY---------TAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 78
Query: 150 LVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDA 209
+V + L G+ +V E++ GSL + + A + + A L FLH
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQA---LEFLHS- 134
Query: 210 ESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATG 269
+QVI+RD K+ NILL + + KL+DFG A T +++ S V GT + APE V
Sbjct: 135 -NQVIHRDIKSDNILLGMDGSVKLTDFGFC-AQITPEQSKRSXMV-GTPYWMAPEVVTRK 191
Query: 270 RLTTKSDVYSFGVVLLELLSGR 291
K D++S G++ +E++ G
Sbjct: 192 AYGPKVDIWSLGIMAIEMIEGE 213
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 98/202 (48%), Gaps = 16/202 (7%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
+G+G G VY + +G VA++++ + + + E+ + + +PN
Sbjct: 29 IGQGASGTVY---------TAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 79
Query: 150 LVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDA 209
+V + L G+ +V E++ GSL + + A + + A L FLH
Sbjct: 80 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQA---LEFLHS- 135
Query: 210 ESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATG 269
+QVI+RD K+ NILL + + KL+DFG A T +++ S V GT + APE V
Sbjct: 136 -NQVIHRDIKSDNILLGMDGSVKLTDFGFC-AQITPEQSKRSXMV-GTPYWMAPEVVTRK 192
Query: 270 RLTTKSDVYSFGVVLLELLSGR 291
K D++S G++ +E++ G
Sbjct: 193 AYGPKVDIWSLGIMAIEMIEGE 214
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 85/178 (47%), Gaps = 8/178 (4%)
Query: 145 LHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLT 204
L+H N+VK G+ EG + L E+ G L + + P A R + A G+
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV 119
Query: 205 FLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPE 264
+LH + +RD K N+LLD N K+SDFGLA +R + ++ GT Y APE
Sbjct: 120 YLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 265 YVATGRLTTK-SDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW--AKPYLSDKRKL 319
+ + DV+S G+VL +L+G D+ Q DW K YL+ +K+
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKKI 234
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 99/202 (49%), Gaps = 16/202 (7%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
+G+G G VY + +G VA++++ + + + E+ + + +PN
Sbjct: 29 IGQGASGTVY---------TAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 79
Query: 150 LVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDA 209
+V + L G+ +V E++ GSL + + A + + A L FLH
Sbjct: 80 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQA---LEFLHS- 135
Query: 210 ESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATG 269
+QVI+R+ K+ NILL + + KL+DFG A T +++ ST V GT + APE V
Sbjct: 136 -NQVIHRNIKSDNILLGMDGSVKLTDFGFC-AQITPEQSKRSTMV-GTPYWMAPEVVTRK 192
Query: 270 RLTTKSDVYSFGVVLLELLSGR 291
K D++S G++ +E++ G
Sbjct: 193 AYGPKVDIWSLGIMAIEMIEGE 214
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 105/226 (46%), Gaps = 39/226 (17%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVK-----KLKPEGFQGHKEWLT 137
N+R +G+G F K + +H L+ G VA+K +L P Q +
Sbjct: 16 NYRLLKTIGKGNFA---KVKLARHILT------GREVAIKIIDKTQLNPTSLQ---KLFR 63
Query: 138 EVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA 196
EV + L+HPN+VKL +E E L L+ E+ G + ++L G RMK
Sbjct: 64 EVRIMKILNHPNIVKLFE-VIETEKTLYLIMEYASGGEVFDYLVAHG--------RMKEK 114
Query: 197 IGAAK------GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHV 250
+K + + H + ++++RD KA N+LLDA+ N K++DFG + G +
Sbjct: 115 EARSKFRQIVSAVQYCH--QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDA 172
Query: 251 STQVMGTHGYAAPEYVATGRLTT-KSDVYSFGVVLLELLSGRCAVD 295
G YAAPE + + DV+S GV+L L+SG D
Sbjct: 173 ---FCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 95/205 (46%), Gaps = 22/205 (10%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKE-WLTEVNYLGQLHHP 148
+GEG FG V++G +SP P + VA+K K +E +L E + Q HP
Sbjct: 20 IGEGQFGDVHQG----IYMSPENPA--LAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 73
Query: 149 NLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHD 208
++VKLIG E ++ E G L + L R L A + A + L +L
Sbjct: 74 HIVKLIGVITENPV-WIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLES 131
Query: 209 AESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG-----YAAP 263
+ ++RD A N+L+ + KL DFGL++ ST + G + AP
Sbjct: 132 --KRFVHRDIAARNVLVSSNDCVKLGDFGLSRY------MEDSTYYKASKGKLPIKWMAP 183
Query: 264 EYVATGRLTTKSDVYSFGVVLLELL 288
E + R T+ SDV+ FGV + E+L
Sbjct: 184 ESINFRRFTSASDVWMFGVCMWEIL 208
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 104/221 (47%), Gaps = 29/221 (13%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYL 142
N+R +G+G F K + +H L+ K + ++ +L Q + EV +
Sbjct: 15 NYRLLKTIGKGNFA---KVKLARHILT-GKEVAVRIIDKTQLNSSSLQ---KLFREVRIM 67
Query: 143 GQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAK 201
L+HPN+VKL +E E L LV E+ G + ++L G RMK AK
Sbjct: 68 KVLNHPNIVKLFE-VIETEKTLYLVMEYASGGEVFDYLVAHG--------RMKEKEARAK 118
Query: 202 ------GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVM 255
+ + H + +++RD KA N+LLDA+ N K++DFG + G++
Sbjct: 119 FRQIVSAVQYCH--QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FC 173
Query: 256 GTHGYAAPEYVATGRLTT-KSDVYSFGVVLLELLSGRCAVD 295
G+ YAAPE + + DV+S GV+L L+SG D
Sbjct: 174 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 103/223 (46%), Gaps = 33/223 (14%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH--KEWLTEVN 140
N+R +G+G F K + +H L+ G VAVK + ++ EV
Sbjct: 15 NYRLLKTIGKGNFA---KVKLARHILT------GKEVAVKIIDKTQLNSSSLQKLFREVR 65
Query: 141 YLGQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGA 199
+ L+HPN+VKL +E E L LV E+ G + ++L G RMK
Sbjct: 66 IMKVLNHPNIVKLFE-VIETEKTLYLVMEYASGGEVFDYLVAHG--------RMKEKEAR 116
Query: 200 AK------GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 253
AK + + H + +++RD KA N+LLDA+ N K++DFG + G++
Sbjct: 117 AKFRQIVSAVQYCH--QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDA--- 171
Query: 254 VMGTHGYAAPEYVATGRLTT-KSDVYSFGVVLLELLSGRCAVD 295
G YAAPE + + DV+S GV+L L+SG D
Sbjct: 172 FCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 90/183 (49%), Gaps = 18/183 (9%)
Query: 119 VAVKKLKPEGFQGHKEWLT---EVNYLGQLHHPNLVKLIGYCLEGENR-------LLVYE 168
VAVK L+ + + +L E L+HP +V + GE +V E
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYA---TGEAETPAGPLPYIVME 96
Query: 169 FMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAE 228
++ +L + + GP A+ +V A + L F H ++ +I+RD K +NI++ A
Sbjct: 97 YVDGVTLRDIVHTEGPMTPKRAI--EVIADACQALNFSH--QNGIIHRDVKPANIMISAT 152
Query: 229 FNAKLSDFGLAKA-GPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLEL 287
K+ DFG+A+A +G+ + V+GT Y +PE + +SDVYS G VL E+
Sbjct: 153 NAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEV 212
Query: 288 LSG 290
L+G
Sbjct: 213 LTG 215
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 95/205 (46%), Gaps = 22/205 (10%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKE-WLTEVNYLGQLHHP 148
+GEG FG V++G +SP P + VA+K K +E +L E + Q HP
Sbjct: 21 IGEGQFGDVHQG----IYMSPENPA--LAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 74
Query: 149 NLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHD 208
++VKLIG E ++ E G L + L R L A + A + L +L
Sbjct: 75 HIVKLIGVITENPV-WIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLES 132
Query: 209 AESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG-----YAAP 263
+ ++RD A N+L+ + KL DFGL++ ST + G + AP
Sbjct: 133 --KRFVHRDIAARNVLVSSNDCVKLGDFGLSRY------MEDSTYYKASKGKLPIKWMAP 184
Query: 264 EYVATGRLTTKSDVYSFGVVLLELL 288
E + R T+ SDV+ FGV + E+L
Sbjct: 185 ESINFRRFTSASDVWMFGVCMWEIL 209
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 95/205 (46%), Gaps = 22/205 (10%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKE-WLTEVNYLGQLHHP 148
+GEG FG V++G +SP P + VA+K K +E +L E + Q HP
Sbjct: 15 IGEGQFGDVHQG----IYMSPENPA--LAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 68
Query: 149 NLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHD 208
++VKLIG E ++ E G L + L R L A + A + L +L
Sbjct: 69 HIVKLIGVITENP-VWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLES 126
Query: 209 AESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG-----YAAP 263
+ ++RD A N+L+ + KL DFGL++ ST + G + AP
Sbjct: 127 --KRFVHRDIAARNVLVSSNDCVKLGDFGLSRY------MEDSTYYKASKGKLPIKWMAP 178
Query: 264 EYVATGRLTTKSDVYSFGVVLLELL 288
E + R T+ SDV+ FGV + E+L
Sbjct: 179 ESINFRRFTSASDVWMFGVCMWEIL 203
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 89/180 (49%), Gaps = 12/180 (6%)
Query: 119 VAVKKLKPEGFQGHKEWLT---EVNYLGQLHHPNLVKLI----GYCLEGENRLLVYEFMP 171
VAVK L+ + + +L E L+HP +V + G +V E++
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVD 99
Query: 172 KGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNA 231
+L + + GP A+ +V A + L F H ++ +I+RD K +NI++ A
Sbjct: 100 GVTLRDIVHTEGPMTPKRAI--EVIADACQALNFSH--QNGIIHRDVKPANIMISATNAV 155
Query: 232 KLSDFGLAKA-GPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
K+ DFG+A+A +G+ + V+GT Y +PE + +SDVYS G VL E+L+G
Sbjct: 156 KVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 115/268 (42%), Gaps = 44/268 (16%)
Query: 41 PIPPSK---EKGNSESLPTPKS---EGEILSSSNLKAFTFNELKTATRNFRPDSLL---- 90
P PP++ E G E P P+S E + +S +A L+ P S L
Sbjct: 102 PPPPARARQENGMPEKPPGPRSPQREPQRVSHEQFRA----ALQLVVDPGDPRSYLDNFI 157
Query: 91 --GEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHP 148
GEG G V + SG +VAVKK+ Q + EV + H
Sbjct: 158 KIGEGSTGIVCIATVR---------SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHE 208
Query: 149 NLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHD 208
N+V++ L G+ +V EF+ G+L + + A V + + L+ LH
Sbjct: 209 NVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA---VCLAVLQALSVLH- 264
Query: 209 AESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV------MGTHGYAA 262
VI+RD K+ +ILL + KLSDFG VS +V +GT + A
Sbjct: 265 -AQGVIHRDIKSDSILLTHDGRVKLSDFGFC--------AQVSKEVPRRKXLVGTPYWMA 315
Query: 263 PEYVATGRLTTKSDVYSFGVVLLELLSG 290
PE ++ + D++S G++++E++ G
Sbjct: 316 PELISRLPYGPEVDIWSLGIMVIEMVDG 343
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 95/205 (46%), Gaps = 22/205 (10%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKE-WLTEVNYLGQLHHP 148
+GEG FG V++G +SP P + VA+K K +E +L E + Q HP
Sbjct: 23 IGEGQFGDVHQG----IYMSPENPA--LAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 76
Query: 149 NLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHD 208
++VKLIG E ++ E G L + L R L A + A + L +L
Sbjct: 77 HIVKLIGVITENPV-WIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLES 134
Query: 209 AESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG-----YAAP 263
+ ++RD A N+L+ + KL DFGL++ ST + G + AP
Sbjct: 135 --KRFVHRDIAARNVLVSSNDCVKLGDFGLSRY------MEDSTYYKASKGKLPIKWMAP 186
Query: 264 EYVATGRLTTKSDVYSFGVVLLELL 288
E + R T+ SDV+ FGV + E+L
Sbjct: 187 ESINFRRFTSASDVWMFGVCMWEIL 211
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 95/205 (46%), Gaps = 22/205 (10%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKE-WLTEVNYLGQLHHP 148
+GEG FG V++G +SP P + VA+K K +E +L E + Q HP
Sbjct: 18 IGEGQFGDVHQG----IYMSPENPA--LAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 71
Query: 149 NLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHD 208
++VKLIG E ++ E G L + L R L A + A + L +L
Sbjct: 72 HIVKLIGVITENPV-WIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLES 129
Query: 209 AESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG-----YAAP 263
+ ++RD A N+L+ + KL DFGL++ ST + G + AP
Sbjct: 130 --KRFVHRDIAARNVLVSSNDCVKLGDFGLSRY------MEDSTYYKASKGKLPIKWMAP 181
Query: 264 EYVATGRLTTKSDVYSFGVVLLELL 288
E + R T+ SDV+ FGV + E+L
Sbjct: 182 ESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 89/180 (49%), Gaps = 12/180 (6%)
Query: 119 VAVKKLKPEGFQGHKEWLT---EVNYLGQLHHPNLVKLI----GYCLEGENRLLVYEFMP 171
VAVK L+ + + +L E L+HP +V + G +V E++
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVD 99
Query: 172 KGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNA 231
+L + + GP A+ +V A + L F H ++ +I+RD K +NI++ A
Sbjct: 100 GVTLRDIVHTEGPMTPKRAI--EVIADACQALNFSH--QNGIIHRDVKPANIMISATNAV 155
Query: 232 KLSDFGLAKA-GPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
K+ DFG+A+A +G+ + V+GT Y +PE + +SDVYS G VL E+L+G
Sbjct: 156 KVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 85/178 (47%), Gaps = 8/178 (4%)
Query: 145 LHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLT 204
L+H N+VK G+ EG + L E+ G L + + P A R + A G+
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV 119
Query: 205 FLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPE 264
+LH + +RD K N+LLD N K+SDFGLA +R + ++ GT Y APE
Sbjct: 120 YLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 265 YVATGRLTTK-SDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW--AKPYLSDKRKL 319
+ + DV+S G+VL +L+G D+ Q DW K YL+ +K+
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKKI 234
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 85/178 (47%), Gaps = 8/178 (4%)
Query: 145 LHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLT 204
L+H N+VK G+ EG + L E+ G L + + P A R + A G+
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV 119
Query: 205 FLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPE 264
+LH + +RD K N+LLD N K+SDFGLA +R + ++ GT Y APE
Sbjct: 120 YLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 265 YVATGRLTTK-SDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW--AKPYLSDKRKL 319
+ + DV+S G+VL +L+G D+ Q DW K YL+ +K+
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKKI 234
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 85/178 (47%), Gaps = 8/178 (4%)
Query: 145 LHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLT 204
L+H N+VK G+ EG + L E+ G L + + P A R + A G+
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV 119
Query: 205 FLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPE 264
+LH + +RD K N+LLD N K+SDFGLA +R + ++ GT Y APE
Sbjct: 120 YLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 265 YVATGRLTTK-SDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW--AKPYLSDKRKL 319
+ + DV+S G+VL +L+G D+ Q DW K YL+ +K+
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKKI 234
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 87/185 (47%), Gaps = 8/185 (4%)
Query: 138 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 197
E+ L+H N+VK G+ EG + L E+ G L + + P A R +
Sbjct: 54 EIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL 113
Query: 198 GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 257
A G+ +LH + +RD K N+LLD N K+SDFGLA +R + ++ GT
Sbjct: 114 MA--GVVYLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 258 HGYAAPEYVATGRLTTK-SDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW--AKPYLS 314
Y APE + + DV+S G+VL +L+G D+ Q DW K YL+
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLN 228
Query: 315 DKRKL 319
+K+
Sbjct: 229 PWKKI 233
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 87/185 (47%), Gaps = 8/185 (4%)
Query: 138 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 197
E+ L+H N+VK G+ EG + L E+ G L + + P A R +
Sbjct: 55 EICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL 114
Query: 198 GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 257
A G+ +LH + +RD K N+LLD N K+SDFGLA +R + ++ GT
Sbjct: 115 MA--GVVYLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 258 HGYAAPEYVATGRLTTK-SDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW--AKPYLS 314
Y APE + + DV+S G+VL +L+G D+ Q DW K YL+
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLN 229
Query: 315 DKRKL 319
+K+
Sbjct: 230 PWKKI 234
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 89/180 (49%), Gaps = 12/180 (6%)
Query: 119 VAVKKLKPEGFQGHKEWLT---EVNYLGQLHHPNLVKLI----GYCLEGENRLLVYEFMP 171
VAVK L+ + + +L E L+HP +V + G +V E++
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVD 99
Query: 172 KGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNA 231
+L + + GP A+ +V A + L F H ++ +I+RD K +NI++ A
Sbjct: 100 GVTLRDIVHTEGPMTPKRAI--EVIADACQALNFSH--QNGIIHRDVKPANIMISATNAV 155
Query: 232 KLSDFGLAKA-GPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
K+ DFG+A+A +G+ + V+GT Y +PE + +SDVYS G VL E+L+G
Sbjct: 156 KVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 87/185 (47%), Gaps = 8/185 (4%)
Query: 138 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 197
E+ L+H N+VK G+ EG + L E+ G L + + P A R +
Sbjct: 54 EIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL 113
Query: 198 GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 257
A G+ +LH + +RD K N+LLD N K+SDFGLA +R + ++ GT
Sbjct: 114 MA--GVVYLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT 169
Query: 258 HGYAAPEYVATGRLTTK-SDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW--AKPYLS 314
Y APE + + DV+S G+VL +L+G D+ Q DW K YL+
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLN 228
Query: 315 DKRKL 319
+K+
Sbjct: 229 PWKKI 233
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 95/205 (46%), Gaps = 22/205 (10%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKE-WLTEVNYLGQLHHP 148
+GEG FG V++G +SP P + VA+K K +E +L E + Q HP
Sbjct: 46 IGEGQFGDVHQG----IYMSPENPA--LAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 99
Query: 149 NLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHD 208
++VKLIG E ++ E G L + L R L A + A + L +L
Sbjct: 100 HIVKLIGVITENP-VWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLES 157
Query: 209 AESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG-----YAAP 263
+ ++RD A N+L+ + KL DFGL++ ST + G + AP
Sbjct: 158 --KRFVHRDIAARNVLVSSNDCVKLGDFGLSRY------MEDSTYYKASKGKLPIKWMAP 209
Query: 264 EYVATGRLTTKSDVYSFGVVLLELL 288
E + R T+ SDV+ FGV + E+L
Sbjct: 210 ESINFRRFTSASDVWMFGVCMWEIL 234
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 85/178 (47%), Gaps = 8/178 (4%)
Query: 145 LHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLT 204
L+H N+VK G+ EG + L E+ G L + + P A R + A G+
Sbjct: 60 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV 117
Query: 205 FLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPE 264
+LH + +RD K N+LLD N K+SDFGLA +R + ++ GT Y APE
Sbjct: 118 YLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 175
Query: 265 YVATGRLTTK-SDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW--AKPYLSDKRKL 319
+ + DV+S G+VL +L+G D+ Q DW K YL+ +K+
Sbjct: 176 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKKI 232
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 87/185 (47%), Gaps = 8/185 (4%)
Query: 138 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 197
E+ L+H N+VK G+ EG + L E+ G L + + P A R +
Sbjct: 55 EIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL 114
Query: 198 GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 257
A G+ +LH + +RD K N+LLD N K+SDFGLA +R + ++ GT
Sbjct: 115 MA--GVVYLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT 170
Query: 258 HGYAAPEYVATGRLTTK-SDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW--AKPYLS 314
Y APE + + DV+S G+VL +L+G D+ Q DW K YL+
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLN 229
Query: 315 DKRKL 319
+K+
Sbjct: 230 PWKKI 234
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 87/185 (47%), Gaps = 8/185 (4%)
Query: 138 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 197
E+ L+H N+VK G+ EG + L E+ G L + + P A R +
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL 113
Query: 198 GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 257
A G+ +LH + +RD K N+LLD N K+SDFGLA +R + ++ GT
Sbjct: 114 MA--GVVYLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 258 HGYAAPEYVATGRLTTK-SDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW--AKPYLS 314
Y APE + + DV+S G+VL +L+G D+ Q DW K YL+
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLN 228
Query: 315 DKRKL 319
+K+
Sbjct: 229 PWKKI 233
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 85/178 (47%), Gaps = 8/178 (4%)
Query: 145 LHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLT 204
L+H N+VK G+ EG + L E+ G L + + P A R + A G+
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV 119
Query: 205 FLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPE 264
+LH + +RD K N+LLD N K+SDFGLA +R + ++ GT Y APE
Sbjct: 120 YLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 265 YVATGRLTTK-SDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW--AKPYLSDKRKL 319
+ + DV+S G+VL +L+G D+ Q DW K YL+ +K+
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKKI 234
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 85/178 (47%), Gaps = 8/178 (4%)
Query: 145 LHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLT 204
L+H N+VK G+ EG + L E+ G L + + P A R + A G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV 118
Query: 205 FLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPE 264
+LH + +RD K N+LLD N K+SDFGLA +R + ++ GT Y APE
Sbjct: 119 YLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 265 YVATGRLTTK-SDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW--AKPYLSDKRKL 319
+ + DV+S G+VL +L+G D+ Q DW K YL+ +K+
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKKI 233
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 85/178 (47%), Gaps = 8/178 (4%)
Query: 145 LHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLT 204
L+H N+VK G+ EG + L E+ G L + + P A R + A G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV 118
Query: 205 FLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPE 264
+LH + +RD K N+LLD N K+SDFGLA +R + ++ GT Y APE
Sbjct: 119 YLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 265 YVATGRLTTK-SDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW--AKPYLSDKRKL 319
+ + DV+S G+VL +L+G D+ Q DW K YL+ +K+
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKKI 233
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 92/207 (44%), Gaps = 26/207 (12%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVK---KLKPEGFQGHKEWLTEVNYLGQLH 146
LG+G FG VY Q S ++A+K K + E + EV L
Sbjct: 20 LGKGKFGNVYLARERQ---------SKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR 70
Query: 147 HPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGA---AKGL 203
HPN+++L GY + L+ E+ P G++ L Q LS + A A L
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSRFDEQRTATYITELANAL 125
Query: 204 TFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAP 263
++ H +VI+RD K N+LL + K++DFG + P+ R T + GT Y P
Sbjct: 126 SYCHS--KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR----TTLCGTLDYLPP 179
Query: 264 EYVATGRLTTKSDVYSFGVVLLELLSG 290
E + K D++S GV+ E L G
Sbjct: 180 EMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 85/178 (47%), Gaps = 8/178 (4%)
Query: 145 LHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLT 204
L+H N+VK G+ EG + L E+ G L + + P A R + A G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV 118
Query: 205 FLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPE 264
+LH + +RD K N+LLD N K+SDFGLA +R + ++ GT Y APE
Sbjct: 119 YLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 176
Query: 265 YVATGRLTTK-SDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW--AKPYLSDKRKL 319
+ + DV+S G+VL +L+G D+ Q DW K YL+ +K+
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKKI 233
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 116/281 (41%), Gaps = 38/281 (13%)
Query: 78 KTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEW-- 135
K +F LLG+G FG V + + +G A+K L+ E E
Sbjct: 4 KVTMNDFDYLKLLGKGTFGKV---------ILVREKATGRYYAMKILRKEVIIAKDEVAH 54
Query: 136 -LTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRGPQPLSWAVRM 193
+TE L HP L L Y + +RL V E+ G L HL R A
Sbjct: 55 TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY 113
Query: 194 KVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 253
I +A L +LH + V+YRD K N++LD + + K++DFGL K G + T +
Sbjct: 114 GAEIVSA--LEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-- 167
Query: 254 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYL 313
GT Y APE + D + GVV+ E++ GR Y
Sbjct: 168 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-----------------YN 210
Query: 314 SDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLR 354
D +LF ++ + ++P+ + A +L L +PK R
Sbjct: 211 QDHERLFELILME-EIRFPRTLSPEAKSLLAGLLKKDPKQR 250
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 85/178 (47%), Gaps = 8/178 (4%)
Query: 145 LHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLT 204
L+H N+VK G+ EG + L E+ G L + + P A R + A G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV 118
Query: 205 FLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPE 264
+LH + +RD K N+LLD N K+SDFGLA +R + ++ GT Y APE
Sbjct: 119 YLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 176
Query: 265 YVATGRLTTK-SDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW--AKPYLSDKRKL 319
+ + DV+S G+VL +L+G D+ Q DW K YL+ +K+
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS-XQEYSDWKEKKTYLNPWKKI 233
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 85/178 (47%), Gaps = 8/178 (4%)
Query: 145 LHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLT 204
L+H N+VK G+ EG + L E+ G L + + P A R + A G+
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV 119
Query: 205 FLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPE 264
+LH + +RD K N+LLD N K+SDFGLA +R + ++ GT Y APE
Sbjct: 120 YLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 265 YVATGRLTTK-SDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW--AKPYLSDKRKL 319
+ + DV+S G+VL +L+G D+ Q DW K YL+ +K+
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKKI 234
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 116/281 (41%), Gaps = 38/281 (13%)
Query: 78 KTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEW-- 135
K +F LLG+G FG V + + +G A+K L+ E E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKV---------ILVREKATGRYYAMKILRKEVIIAKDEVAH 51
Query: 136 -LTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRGPQPLSWAVRM 193
+TE L HP L L Y + +RL V E+ G L HL R A
Sbjct: 52 TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY 110
Query: 194 KVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 253
I +A L +LH + V+YRD K N++LD + + K++DFGL K G + T +
Sbjct: 111 GAEIVSA--LEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-- 164
Query: 254 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYL 313
GT Y APE + D + GVV+ E++ GR Y
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-----------------YN 207
Query: 314 SDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLR 354
D +LF ++ + ++P+ + A +L L +PK R
Sbjct: 208 QDHERLFELILME-EIRFPRTLSPEAKSLLAGLLKKDPKQR 247
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 85/178 (47%), Gaps = 8/178 (4%)
Query: 145 LHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLT 204
L+H N+VK G+ EG + L E+ G L + + P A R + A G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV 118
Query: 205 FLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPE 264
+LH + +RD K N+LLD N K+SDFGLA +R + ++ GT Y APE
Sbjct: 119 YLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 176
Query: 265 YVATGRLTTK-SDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW--AKPYLSDKRKL 319
+ + DV+S G+VL +L+G D+ Q DW K YL+ +K+
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKKI 233
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 85/178 (47%), Gaps = 8/178 (4%)
Query: 145 LHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLT 204
L+H N+VK G+ EG + L E+ G L + + P A R + A G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV 118
Query: 205 FLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPE 264
+LH + +RD K N+LLD N K+SDFGLA +R + ++ GT Y APE
Sbjct: 119 YLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 265 YVATGRLTTK-SDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW--AKPYLSDKRKL 319
+ + DV+S G+VL +L+G D+ Q DW K YL+ +K+
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKKI 233
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 85/178 (47%), Gaps = 8/178 (4%)
Query: 145 LHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLT 204
L+H N+VK G+ EG + L E+ G L + + P A R + A G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV 118
Query: 205 FLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPE 264
+LH + +RD K N+LLD N K+SDFGLA +R + ++ GT Y APE
Sbjct: 119 YLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 265 YVATGRLTTK-SDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW--AKPYLSDKRKL 319
+ + DV+S G+VL +L+G D+ Q DW K YL+ +K+
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKKI 233
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 81/159 (50%), Gaps = 13/159 (8%)
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSL-ENHLFRRGPQPLSWAVRMK 194
L EV L QL HPN++KL + + N LV E G L + + R+ + AV MK
Sbjct: 69 LDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMK 128
Query: 195 VAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN---AKLSDFGLAKAGPTGDRTHVS 251
+ G T+LH + +++RD K N+LL+++ K+ DFGL+ G +
Sbjct: 129 QVLS---GTTYLH--KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKM--- 180
Query: 252 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+ +GT Y APE V + K DV+S GV+L LL G
Sbjct: 181 KERLGTAYYIAPE-VLRKKYDEKCDVWSCGVILYILLCG 218
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 85/178 (47%), Gaps = 8/178 (4%)
Query: 145 LHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLT 204
L+H N+VK G+ EG + L E+ G L + + P A R + A G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV 118
Query: 205 FLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPE 264
+LH + +RD K N+LLD N K+SDFGLA +R + ++ GT Y APE
Sbjct: 119 YLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 265 YVATGRLTTK-SDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW--AKPYLSDKRKL 319
+ + DV+S G+VL +L+G D+ Q DW K YL+ +K+
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKKI 233
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 81/159 (50%), Gaps = 13/159 (8%)
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSL-ENHLFRRGPQPLSWAVRMK 194
L EV L QL HPN++KL + + N LV E G L + + R+ + AV MK
Sbjct: 52 LDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMK 111
Query: 195 VAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN---AKLSDFGLAKAGPTGDRTHVS 251
+ G T+LH + +++RD K N+LL+++ K+ DFGL+ G +
Sbjct: 112 QVLS---GTTYLH--KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKM--- 163
Query: 252 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+ +GT Y APE V + K DV+S GV+L LL G
Sbjct: 164 KERLGTAYYIAPE-VLRKKYDEKCDVWSCGVILYILLCG 201
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 115/281 (40%), Gaps = 38/281 (13%)
Query: 78 KTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEW-- 135
K +F LLG+G FG V + + +G A+K L+ E E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKV---------ILVREKATGRYYAMKILRKEVIIAKDEVAH 51
Query: 136 -LTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRGPQPLSWAVRM 193
+TE L HP L L Y + +RL V E+ G L HL R A
Sbjct: 52 TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY 110
Query: 194 KVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 253
I +A L +LH + V+YRD K N++LD + + K++DFGL K G + T
Sbjct: 111 GAEIVSA--LEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKX 164
Query: 254 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYL 313
GT Y APE + D + GVV+ E++ GR Y
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-----------------YN 207
Query: 314 SDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLR 354
D +LF ++ + ++P+ + A +L L +PK R
Sbjct: 208 QDHERLFELILME-EIRFPRTLSPEAKSLLAGLLKKDPKQR 247
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 115/281 (40%), Gaps = 38/281 (13%)
Query: 78 KTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEW-- 135
K +F LLG+G FG V + + +G A+K L+ E E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKV---------ILVREKATGRYYAMKILRKEVIIAKDEVAH 51
Query: 136 -LTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRGPQPLSWAVRM 193
+TE L HP L L Y + +RL V E+ G L HL R A
Sbjct: 52 TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY 110
Query: 194 KVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 253
I +A L +LH + V+YRD K N++LD + + K++DFGL K G + T
Sbjct: 111 GAEIVSA--LEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKX 164
Query: 254 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYL 313
GT Y APE + D + GVV+ E++ GR Y
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-----------------YN 207
Query: 314 SDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLR 354
D +LF ++ + ++P+ + A +L L +PK R
Sbjct: 208 QDHERLFELILME-EIRFPRTLSPEAKSLLAGLLKKDPKQR 247
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 115/281 (40%), Gaps = 38/281 (13%)
Query: 78 KTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEW-- 135
K +F LLG+G FG V + + +G A+K L+ E E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKV---------ILVREKATGRYYAMKILRKEVIIAKDEVAH 51
Query: 136 -LTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRGPQPLSWAVRM 193
+TE L HP L L Y + +RL V E+ G L HL R A
Sbjct: 52 TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY 110
Query: 194 KVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 253
I +A L +LH + V+YRD K N++LD + + K++DFGL K G + T
Sbjct: 111 GAEIVSA--LEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKX 164
Query: 254 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYL 313
GT Y APE + D + GVV+ E++ GR Y
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-----------------YN 207
Query: 314 SDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLR 354
D +LF ++ + ++P+ + A +L L +PK R
Sbjct: 208 QDHERLFELILME-EIRFPRTLSPEAKSLLAGLLKKDPKQR 247
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 115/281 (40%), Gaps = 38/281 (13%)
Query: 78 KTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEW-- 135
K +F LLG+G FG V + + +G A+K L+ E E
Sbjct: 6 KVTMNDFDYLKLLGKGTFGKV---------ILVREKATGRYYAMKILRKEVIIAKDEVAH 56
Query: 136 -LTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRGPQPLSWAVRM 193
+TE L HP L L Y + +RL V E+ G L HL R A
Sbjct: 57 TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY 115
Query: 194 KVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 253
I +A L +LH + V+YRD K N++LD + + K++DFGL K G + T
Sbjct: 116 GAEIVSA--LEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKX 169
Query: 254 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYL 313
GT Y APE + D + GVV+ E++ GR Y
Sbjct: 170 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-----------------YN 212
Query: 314 SDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLR 354
D +LF ++ + ++P+ + A +L L +PK R
Sbjct: 213 QDHERLFELILME-EIRFPRTLSPEAKSLLAGLLKKDPKQR 252
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 116/281 (41%), Gaps = 38/281 (13%)
Query: 78 KTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEW-- 135
K +F LLG+G FG V + + +G A+K L+ E E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKV---------ILVREKATGRYYAMKILRKEVIIAKDEVAH 51
Query: 136 -LTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRGPQPLSWAVRM 193
+TE L HP L L Y + +RL V E+ G L HL R A
Sbjct: 52 TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY 110
Query: 194 KVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 253
I +A L +LH + V+YRD K N++LD + + K++DFGL K G + T +
Sbjct: 111 GAEIVSA--LEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-- 164
Query: 254 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYL 313
GT Y APE + D + GVV+ E++ GR Y
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-----------------YN 207
Query: 314 SDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLR 354
D +LF ++ + ++P+ + A +L L +PK R
Sbjct: 208 QDHERLFELILME-EIRFPRTLSPEAKSLLAGLLKKDPKQR 247
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 90/183 (49%), Gaps = 18/183 (9%)
Query: 119 VAVKKLKPEGFQGHKEWLT---EVNYLGQLHHPNLVKLIGYCLEGENR-------LLVYE 168
VAVK L+ + + +L E L+HP +V + GE +V E
Sbjct: 57 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD---TGEAETPAGPLPYIVME 113
Query: 169 FMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAE 228
++ +L + + GP A+ +V A + L F H ++ +I+RD K +NI++ A
Sbjct: 114 YVDGVTLRDIVHTEGPMTPKRAI--EVIADACQALNFSH--QNGIIHRDVKPANIMISAT 169
Query: 229 FNAKLSDFGLAKA-GPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLEL 287
K+ DFG+A+A +G+ + V+GT Y +PE + +SDVYS G VL E+
Sbjct: 170 NAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEV 229
Query: 288 LSG 290
L+G
Sbjct: 230 LTG 232
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 104/218 (47%), Gaps = 23/218 (10%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH--KEWLTEVN 140
N+R +G+G F K + +H L+ G VAVK + ++ EV
Sbjct: 8 NYRLLKTIGKGNFA---KVKLARHILT------GKEVAVKIIDKTQLNSSSLQKLFREVR 58
Query: 141 YLGQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRGPQPLSWA-VRMKVAIG 198
+ L+HPN+VKL +E E L LV E+ G + ++L G A + + +
Sbjct: 59 IMKVLNHPNIVKLFE-VIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVS 117
Query: 199 AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH 258
A + + H + +++RD KA N+LLDA+ N K++DFG + G++ G+
Sbjct: 118 AVQ---YCH--QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSP 169
Query: 259 GYAAPEYVATGRLTT-KSDVYSFGVVLLELLSGRCAVD 295
YAAPE + + DV+S GV+L L+SG D
Sbjct: 170 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 207
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 99/211 (46%), Gaps = 23/211 (10%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQG---HKEWLTEVNYLGQLH 146
LGEG FG K + H + K VA+K + + + H E++YL L
Sbjct: 17 LGEGSFG---KVKLATHYKTQQK------VALKFISRQLLKKSDMHMRVEREISYLKLLR 67
Query: 147 HPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFL 206
HP+++KL + ++V E+ G L +++ + R I A + +
Sbjct: 68 HPHIIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQIICA--IEYC 124
Query: 207 HDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYV 266
H ++++RD K N+LLD N K++DFGL+ G+ S G+ YAAPE V
Sbjct: 125 H--RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPE-V 178
Query: 267 ATGRLTT--KSDVYSFGVVLLELLSGRCAVD 295
G+L + DV+S G+VL +L GR D
Sbjct: 179 INGKLYAGPEVDVWSCGIVLYVMLVGRLPFD 209
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 107/215 (49%), Gaps = 27/215 (12%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVK----KLKPEGFQGHKEWLTE 138
+F S LG G G V K QH +P SG+++A K ++KP + + E
Sbjct: 17 DFERISELGAGNGGVVTKV---QH-----RP-SGLIMARKLIHLEIKP---AIRNQIIRE 64
Query: 139 VNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHL--FRRGPQPLSWAVRMKVA 196
+ L + + P +V G + E M GSL+ L +R P+ + KV+
Sbjct: 65 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPE----EILGKVS 120
Query: 197 IGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMG 256
I +GL +L + + Q+++RD K SNIL+++ KL DFG++ G D ++ +G
Sbjct: 121 IAVLRGLAYLRE-KHQIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVG 175
Query: 257 THGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 291
T Y APE + + +SD++S G+ L+EL GR
Sbjct: 176 TRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGR 210
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 89/182 (48%), Gaps = 15/182 (8%)
Query: 117 MVVAVKKLKPEGFQGHKEWLT-EVNYLGQLH-HPNLVKLIGYCLEGENRLLVYEFMPKGS 174
M V ++L PE + +E E + L Q+ HP+++ LI LV++ M KG
Sbjct: 127 MEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGE 186
Query: 175 LENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLS 234
L ++L + LS + + ++FLH + +++RD K NILLD +LS
Sbjct: 187 LFDYLTEK--VALSEKETRSIMRSLLEAVSFLH--ANNIVHRDLKPENILLDDNMQIRLS 242
Query: 235 DFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTT------KSDVYSFGVVLLELL 288
DFG + G++ ++ GT GY APE + T + D+++ GV+L LL
Sbjct: 243 DFGFSCHLEPGEKLR---ELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLL 299
Query: 289 SG 290
+G
Sbjct: 300 AG 301
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 96/209 (45%), Gaps = 32/209 (15%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
+GEG G V + SG +VAVKK+ Q + EV + H N
Sbjct: 39 IGEGSTGIVCIATVR---------SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 89
Query: 150 LVKLIGYCLEGENRLLVYEFMPKGSLENHL--FRRGPQPLSWAVRMKVAIGAAKGLTFLH 207
+V++ L G+ +V EF+ G+L + + R + ++ V + + L+ LH
Sbjct: 90 VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLH 144
Query: 208 DAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV------MGTHGYA 261
VI+RD K+ +ILL + KLSDFG VS +V +GT +
Sbjct: 145 --AQGVIHRDIKSDSILLTHDGRVKLSDFGFC--------AQVSKEVPRRKXLVGTPYWM 194
Query: 262 APEYVATGRLTTKSDVYSFGVVLLELLSG 290
APE ++ + D++S G++++E++ G
Sbjct: 195 APELISRLPYGPEVDIWSLGIMVIEMVDG 223
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 96/209 (45%), Gaps = 32/209 (15%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
+GEG G V + SG +VAVKK+ Q + EV + H N
Sbjct: 37 IGEGSTGIVCIATVR---------SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 87
Query: 150 LVKLIGYCLEGENRLLVYEFMPKGSLENHL--FRRGPQPLSWAVRMKVAIGAAKGLTFLH 207
+V++ L G+ +V EF+ G+L + + R + ++ V + + L+ LH
Sbjct: 88 VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLH 142
Query: 208 DAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV------MGTHGYA 261
VI+RD K+ +ILL + KLSDFG VS +V +GT +
Sbjct: 143 --AQGVIHRDIKSDSILLTHDGRVKLSDFGFC--------AQVSKEVPRRKXLVGTPYWM 192
Query: 262 APEYVATGRLTTKSDVYSFGVVLLELLSG 290
APE ++ + D++S G++++E++ G
Sbjct: 193 APELISRLPYGPEVDIWSLGIMVIEMVDG 221
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 102/225 (45%), Gaps = 29/225 (12%)
Query: 75 NELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKE 134
+ +K NF +LG+G FG V + + G+ + AVK LK + +
Sbjct: 15 DRMKLTDFNFL--MVLGKGSFGKV---------MLSERKGTDELYAVKILKKDVVIQDDD 63
Query: 135 W---LTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRG----PQP 186
+ E L P + + C + +RL V E++ G L H+ + G P
Sbjct: 64 VECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHA 123
Query: 187 LSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGD 246
+ +A + + GL FL +IYRD K N++LD+E + K++DFG+ K
Sbjct: 124 VFYAAEIAI------GLFFLQ--SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG 175
Query: 247 RTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 291
T + GT Y APE +A D ++FGV+L E+L+G+
Sbjct: 176 VT--TKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 218
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 93/207 (44%), Gaps = 28/207 (13%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
+GEG G V + SG +VAVKK+ Q + EV + H N
Sbjct: 82 IGEGSTGIVCIATVR---------SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 132
Query: 150 LVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDA 209
+V++ L G+ +V EF+ G+L + + A V + + L+ LH
Sbjct: 133 VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA---VCLAVLQALSVLH-- 187
Query: 210 ESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV------MGTHGYAAP 263
VI+RD K+ +ILL + KLSDFG VS +V +GT + AP
Sbjct: 188 AQGVIHRDIKSDSILLTHDGRVKLSDFGFC--------AQVSKEVPRRKXLVGTPYWMAP 239
Query: 264 EYVATGRLTTKSDVYSFGVVLLELLSG 290
E ++ + D++S G++++E++ G
Sbjct: 240 ELISRLPYGPEVDIWSLGIMVIEMVDG 266
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 98/219 (44%), Gaps = 25/219 (11%)
Query: 80 ATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLK-PEGFQGHK-EWLT 137
AT + P + +G G +G VYK P SG VA+K ++ P G +G +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKA---------RDPHSGHFVALKSVRVPNGEEGLPISTVR 52
Query: 138 EVNYLGQLH---HPNLVKLIGYCLEGENR-----LLVYEFMPKGSLENHLFRRGPQPLSW 189
EV L +L HPN+V+L+ C LV+E + + L +L + P L
Sbjct: 53 EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPA 111
Query: 190 AVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTH 249
+ +GL FLH + +++RD K NIL+ + KL+DFGLA+
Sbjct: 112 ETIKDLMRQFLRGLDFLH--ANCIVHRDLKPENILVTSGGTVKLADFGLAR---IYSYQM 166
Query: 250 VSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELL 288
V+ T Y APE + T D++S G + E+
Sbjct: 167 ALAPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 97/215 (45%), Gaps = 24/215 (11%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGF---QGHKEWLTEV 139
+F ++G GGFG VY K +G + A+K L + QG L E
Sbjct: 190 DFSVHRIIGRGGFGEVY---------GCRKADTGKMYAMKCLDKKRIKMKQGETLALNER 240
Query: 140 NYLGQLHHPN--LVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA 196
L + + + + Y ++L + + M G L HL + G S A A
Sbjct: 241 IMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV--FSEADMRFYA 298
Query: 197 IGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMG 256
GL +H+ V+YRD K +NILLD + ++SD GLA + + H S +G
Sbjct: 299 AEIILGLEHMHN--RFVVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHAS---VG 352
Query: 257 THGYAAPEYVATG-RLTTKSDVYSFGVVLLELLSG 290
THGY APE + G + +D +S G +L +LL G
Sbjct: 353 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 97/215 (45%), Gaps = 24/215 (11%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGF---QGHKEWLTEV 139
+F ++G GGFG VY K +G + A+K L + QG L E
Sbjct: 190 DFSVHRIIGRGGFGEVY---------GCRKADTGKMYAMKCLDKKRIKMKQGETLALNER 240
Query: 140 NYLGQLHHPN--LVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA 196
L + + + + Y ++L + + M G L HL + G S A A
Sbjct: 241 IMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV--FSEADMRFYA 298
Query: 197 IGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMG 256
GL +H+ V+YRD K +NILLD + ++SD GLA + + H S +G
Sbjct: 299 AEIILGLEHMHN--RFVVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHAS---VG 352
Query: 257 THGYAAPEYVATG-RLTTKSDVYSFGVVLLELLSG 290
THGY APE + G + +D +S G +L +LL G
Sbjct: 353 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 97/215 (45%), Gaps = 24/215 (11%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGF---QGHKEWLTEV 139
+F ++G GGFG VY K +G + A+K L + QG L E
Sbjct: 190 DFSVHRIIGRGGFGEVY---------GCRKADTGKMYAMKCLDKKRIKMKQGETLALNER 240
Query: 140 NYLGQLHHPN--LVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA 196
L + + + + Y ++L + + M G L HL + G S A A
Sbjct: 241 IMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV--FSEADMRFYA 298
Query: 197 IGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMG 256
GL +H+ V+YRD K +NILLD + ++SD GLA + + H S +G
Sbjct: 299 AEIILGLEHMHN--RFVVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHAS---VG 352
Query: 257 THGYAAPEYVATG-RLTTKSDVYSFGVVLLELLSG 290
THGY APE + G + +D +S G +L +LL G
Sbjct: 353 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 97/215 (45%), Gaps = 24/215 (11%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGF---QGHKEWLTEV 139
+F ++G GGFG VY K +G + A+K L + QG L E
Sbjct: 189 DFSVHRIIGRGGFGEVY---------GCRKADTGKMYAMKCLDKKRIKMKQGETLALNER 239
Query: 140 NYLGQLHHPN--LVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA 196
L + + + + Y ++L + + M G L HL + G S A A
Sbjct: 240 IMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV--FSEADMRFYA 297
Query: 197 IGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMG 256
GL +H+ V+YRD K +NILLD + ++SD GLA + + H S +G
Sbjct: 298 AEIILGLEHMHN--RFVVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHAS---VG 351
Query: 257 THGYAAPEYVATG-RLTTKSDVYSFGVVLLELLSG 290
THGY APE + G + +D +S G +L +LL G
Sbjct: 352 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 386
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 98/219 (44%), Gaps = 25/219 (11%)
Query: 80 ATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLK-PEGFQGHK-EWLT 137
AT + P + +G G +G VYK P SG VA+K ++ P G +G +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKA---------RDPHSGHFVALKSVRVPNGEEGLPISTVR 52
Query: 138 EVNYLGQLH---HPNLVKLIGYCLEGENR-----LLVYEFMPKGSLENHLFRRGPQPLSW 189
EV L +L HPN+V+L+ C LV+E + + L +L + P L
Sbjct: 53 EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPA 111
Query: 190 AVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTH 249
+ +GL FLH + +++RD K NIL+ + KL+DFGLA+
Sbjct: 112 ETIKDLMRQFLRGLDFLH--ANCIVHRDLKPENILVTSGGTVKLADFGLAR---IYSYQM 166
Query: 250 VSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELL 288
V+ T Y APE + T D++S G + E+
Sbjct: 167 ALDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 102/224 (45%), Gaps = 30/224 (13%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKP-EGFQGHKEWLTEVNY 141
+F+ SLLGEG +G V S +G +VA+KK++P + L E+
Sbjct: 12 DFQLKSLLGEGAYGVV---------CSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKI 62
Query: 142 LGQLHHPNLVKLIGY----CLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 197
L H N++ + E N + + + + + L + Q LS
Sbjct: 63 LKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI---STQMLSDDHIQYFIY 119
Query: 198 GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAK---------AGPTGDRT 248
+ + LH S VI+RD K SN+L+++ + K+ DFGLA+ + PTG ++
Sbjct: 120 QTLRAVKVLHG--SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQS 177
Query: 249 HVSTQVMGTHGYAAPEYVAT-GRLTTKSDVYSFGVVLLELLSGR 291
+ T+ + T Y APE + T + + DV+S G +L EL R
Sbjct: 178 GM-TEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 102/224 (45%), Gaps = 30/224 (13%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKP-EGFQGHKEWLTEVNY 141
+F+ SLLGEG +G V S +G +VA+KK++P + L E+
Sbjct: 12 DFQLKSLLGEGAYGVV---------CSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKI 62
Query: 142 LGQLHHPNLVKLIGY----CLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 197
L H N++ + E N + + + + + L + Q LS
Sbjct: 63 LKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI---STQMLSDDHIQYFIY 119
Query: 198 GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAK---------AGPTGDRT 248
+ + LH S VI+RD K SN+L+++ + K+ DFGLA+ + PTG ++
Sbjct: 120 QTLRAVKVLHG--SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQS 177
Query: 249 HVSTQVMGTHGYAAPEYVAT-GRLTTKSDVYSFGVVLLELLSGR 291
+ T+ + T Y APE + T + + DV+S G +L EL R
Sbjct: 178 GM-TEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 91/207 (43%), Gaps = 26/207 (12%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVK---KLKPEGFQGHKEWLTEVNYLGQLH 146
LG+G FG VY Q S ++A+K K + E + EV L
Sbjct: 20 LGKGKFGNVYLARERQ---------SKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR 70
Query: 147 HPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGA---AKGL 203
HPN+++L GY + L+ E+ P G++ L Q LS + A A L
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSRFDEQRTATYITELANAL 125
Query: 204 TFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAP 263
++ H +VI+RD K N+LL + K++DFG + P+ R + GT Y P
Sbjct: 126 SYCHS--KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR----DTLCGTLDYLPP 179
Query: 264 EYVATGRLTTKSDVYSFGVVLLELLSG 290
E + K D++S GV+ E L G
Sbjct: 180 EMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 96/209 (45%), Gaps = 32/209 (15%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
+GEG G V + SG +VAVKK+ Q + EV + H N
Sbjct: 28 IGEGSTGIVCIATVR---------SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 78
Query: 150 LVKLIGYCLEGENRLLVYEFMPKGSLENHL--FRRGPQPLSWAVRMKVAIGAAKGLTFLH 207
+V++ L G+ +V EF+ G+L + + R + ++ V + + L+ LH
Sbjct: 79 VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLH 133
Query: 208 DAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV------MGTHGYA 261
VI+RD K+ +ILL + KLSDFG VS +V +GT +
Sbjct: 134 --AQGVIHRDIKSDSILLTHDGRVKLSDFGFC--------AQVSKEVPRRKXLVGTPYWM 183
Query: 262 APEYVATGRLTTKSDVYSFGVVLLELLSG 290
APE ++ + D++S G++++E++ G
Sbjct: 184 APELISRLPYGPEVDIWSLGIMVIEMVDG 212
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 96/209 (45%), Gaps = 32/209 (15%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
+GEG G V + SG +VAVKK+ Q + EV + H N
Sbjct: 32 IGEGSTGIVCIATVR---------SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 82
Query: 150 LVKLIGYCLEGENRLLVYEFMPKGSLENHL--FRRGPQPLSWAVRMKVAIGAAKGLTFLH 207
+V++ L G+ +V EF+ G+L + + R + ++ V + + L+ LH
Sbjct: 83 VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLH 137
Query: 208 DAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV------MGTHGYA 261
VI+RD K+ +ILL + KLSDFG VS +V +GT +
Sbjct: 138 --AQGVIHRDIKSDSILLTHDGRVKLSDFGFC--------AQVSKEVPRRKXLVGTPYWM 187
Query: 262 APEYVATGRLTTKSDVYSFGVVLLELLSG 290
APE ++ + D++S G++++E++ G
Sbjct: 188 APELISRLPYGPEVDIWSLGIMVIEMVDG 216
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 80/166 (48%), Gaps = 13/166 (7%)
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRLL--VYEFMPKGSLENHLFR--RGPQPLSWAV 191
++EVN L +L HPN+V+ ++ N L V E+ G L + + + + Q L
Sbjct: 53 VSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEF 112
Query: 192 RMKVAIGAAKGLTFLH---DAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRT 248
++V L H D V++RD K +N+ LD + N KL DFGLA+ T
Sbjct: 113 VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI--LNHDT 170
Query: 249 HVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAV 294
+ +GT Y +PE + KSD++S G +L EL CA+
Sbjct: 171 SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL----CAL 212
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 80/166 (48%), Gaps = 13/166 (7%)
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRLL--VYEFMPKGSLENHLFR--RGPQPLSWAV 191
++EVN L +L HPN+V+ ++ N L V E+ G L + + + + Q L
Sbjct: 53 VSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEF 112
Query: 192 RMKVAIGAAKGLTFLH---DAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRT 248
++V L H D V++RD K +N+ LD + N KL DFGLA+ T
Sbjct: 113 VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI--LNHDT 170
Query: 249 HVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAV 294
+ +GT Y +PE + KSD++S G +L EL CA+
Sbjct: 171 SFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL----CAL 212
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 82/159 (51%), Gaps = 13/159 (8%)
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGP-QPLSWAVRMK 194
L EV L L HPN++KL + + N LV E G L + + R + AV +K
Sbjct: 84 LEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIK 143
Query: 195 VAIGAAKGLTFLHDAESQVIYRDFKASNILLDA-EFNA--KLSDFGLAKAGPTGDRTHVS 251
+ G+T+LH + +++RD K N+LL++ E +A K+ DFGL+ +
Sbjct: 144 QVLS---GVTYLH--KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKM--- 195
Query: 252 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+ +GT Y APE V + K DV+S GV+L LL+G
Sbjct: 196 KERLGTAYYIAPE-VLRKKYDEKCDVWSIGVILFILLAG 233
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 102/218 (46%), Gaps = 23/218 (10%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH--KEWLTEVN 140
N+R +G+G F K + +H L+ G VAVK + ++ EV
Sbjct: 15 NYRLLKTIGKGNFA---KVKLARHILT------GKEVAVKIIDKTQLNSSSLQKLFREVR 65
Query: 141 YLGQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRGPQPLSWA-VRMKVAIG 198
L+HPN+VKL +E E L LV E+ G + ++L G A + + +
Sbjct: 66 IXKVLNHPNIVKLFE-VIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVS 124
Query: 199 AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH 258
A + + H + +++RD KA N+LLDA+ N K++DFG + G++ G
Sbjct: 125 AVQ---YCH--QKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDA---FCGAP 176
Query: 259 GYAAPEYVATGRLTT-KSDVYSFGVVLLELLSGRCAVD 295
YAAPE + + DV+S GV+L L+SG D
Sbjct: 177 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 98/219 (44%), Gaps = 25/219 (11%)
Query: 80 ATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLK-PEGFQGHK-EWLT 137
AT + P + +G G +G VYK P SG VA+K ++ P G +G +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKA---------RDPHSGHFVALKSVRVPNGEEGLPISTVR 52
Query: 138 EVNYLGQLH---HPNLVKLIGYCLEGENR-----LLVYEFMPKGSLENHLFRRGPQPLSW 189
EV L +L HPN+V+L+ C LV+E + + L +L + P L
Sbjct: 53 EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPA 111
Query: 190 AVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTH 249
+ +GL FLH + +++RD K NIL+ + KL+DFGLA+
Sbjct: 112 ETIKDLMRQFLRGLDFLH--ANCIVHRDLKPENILVTSGGTVKLADFGLAR---IYSYQM 166
Query: 250 VSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELL 288
V+ T Y APE + T D++S G + E+
Sbjct: 167 ALFPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 127/278 (45%), Gaps = 38/278 (13%)
Query: 89 LLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KPEGFQGHKEWL-TEVNYLGQLH 146
LG+GGF Y + + + +G VV L KP KE + TE+ L
Sbjct: 49 FLGKGGFAKCY----EITDMDTKEVFAGKVVPKSMLLKPH----QKEKMSTEIAIHKSLD 100
Query: 147 HPNLVKLIGYCLEGENRLLVYEFMPKGSL-ENHLFRRGPQPLSWAVRMKVAIGAAKGLTF 205
+P++V G+ + + +V E + SL E H R+ M+ I +G+ +
Sbjct: 101 NPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI---QGVQY 157
Query: 206 LHDAESQVIYRDFKASNILLDAEFNAKLSDFGLA-KAGPTGDRTHVSTQVMGTHGYAAPE 264
LH+ ++VI+RD K N+ L+ + + K+ DFGLA K G+R + GT Y APE
Sbjct: 158 LHN--NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---KKDLCGTPNYIAPE 212
Query: 265 YVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMD 324
+ + + D++S G +L LL G K E S + + Y+ K+ + +
Sbjct: 213 VLCKKGHSFEVDIWSLGCILYTLLVG-------KPPFETSCL--KETYIRIKKNEYSV-- 261
Query: 325 TKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLA 362
P+ A+ L + L+ +P LRP ++E+L
Sbjct: 262 -------PRHINPVASALIRRMLHADPTLRPSVAELLT 292
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 127/278 (45%), Gaps = 38/278 (13%)
Query: 89 LLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KPEGFQGHKEWL-TEVNYLGQLH 146
LG+GGF Y + + + +G VV L KP KE + TE+ L
Sbjct: 33 FLGKGGFAKCY----EITDMDTKEVFAGKVVPKSMLLKPH----QKEKMSTEIAIHKSLD 84
Query: 147 HPNLVKLIGYCLEGENRLLVYEFMPKGSL-ENHLFRRGPQPLSWAVRMKVAIGAAKGLTF 205
+P++V G+ + + +V E + SL E H R+ M+ I +G+ +
Sbjct: 85 NPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI---QGVQY 141
Query: 206 LHDAESQVIYRDFKASNILLDAEFNAKLSDFGLA-KAGPTGDRTHVSTQVMGTHGYAAPE 264
LH+ ++VI+RD K N+ L+ + + K+ DFGLA K G+R + GT Y APE
Sbjct: 142 LHN--NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---KKDLCGTPNYIAPE 196
Query: 265 YVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMD 324
+ + + D++S G +L LL G K E S + + Y+ K+ + +
Sbjct: 197 VLCKKGHSFEVDIWSLGCILYTLLVG-------KPPFETSCL--KETYIRIKKNEYSV-- 245
Query: 325 TKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLA 362
P+ A+ L + L+ +P LRP ++E+L
Sbjct: 246 -------PRHINPVASALIRRMLHADPTLRPSVAELLT 276
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 127/278 (45%), Gaps = 38/278 (13%)
Query: 89 LLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KPEGFQGHKEWL-TEVNYLGQLH 146
LG+GGF Y + + + +G VV L KP KE + TE+ L
Sbjct: 49 FLGKGGFAKCY----EITDMDTKEVFAGKVVPKSMLLKPH----QKEKMSTEIAIHKSLD 100
Query: 147 HPNLVKLIGYCLEGENRLLVYEFMPKGSL-ENHLFRRGPQPLSWAVRMKVAIGAAKGLTF 205
+P++V G+ + + +V E + SL E H R+ M+ I +G+ +
Sbjct: 101 NPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI---QGVQY 157
Query: 206 LHDAESQVIYRDFKASNILLDAEFNAKLSDFGLA-KAGPTGDRTHVSTQVMGTHGYAAPE 264
LH+ ++VI+RD K N+ L+ + + K+ DFGLA K G+R + GT Y APE
Sbjct: 158 LHN--NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---KKXLCGTPNYIAPE 212
Query: 265 YVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMD 324
+ + + D++S G +L LL G K E S + + Y+ K+ + +
Sbjct: 213 VLCKKGHSFEVDIWSLGCILYTLLVG-------KPPFETSCL--KETYIRIKKNEYSV-- 261
Query: 325 TKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLA 362
P+ A+ L + L+ +P LRP ++E+L
Sbjct: 262 -------PRHINPVASALIRRMLHADPTLRPSVAELLT 292
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 115/259 (44%), Gaps = 45/259 (17%)
Query: 48 KGNSESLPTPKSEGE--ILSSSNLKAFTFN---ELKTATRNFRPDSLLGEGGFGFVYKGW 102
+G+ P+PK+E +L + LK + E+ AT R LG G FG V++
Sbjct: 58 RGSRSREPSPKTEDNEGVLLTEKLKPVDYEYREEVHWATHQLR----LGRGSFGEVHRME 113
Query: 103 IDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGEN 162
Q +G AVKK++ E F+ E+ L P +V L G EG
Sbjct: 114 DKQ---------TGFQCAVKKVRLEVFRAE-----ELMACAGLTSPRIVPLYGAVREGPW 159
Query: 163 RLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAA-KGLTFLHDAESQVIYRDFKAS 221
+ E + GSL + +G P R +G A +GL +LH ++++ D KA
Sbjct: 160 VNIFMELLEGGSLGQLVKEQGCLPED---RALYYLGQALEGLEYLHS--RRILHGDVKAD 214
Query: 222 NILLDAE-FNAKLSDFG---------LAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRL 271
N+LL ++ +A L DFG L K+ TGD + GT + APE V
Sbjct: 215 NVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGD------YIPGTETHMAPEVVLGRSC 268
Query: 272 TTKSDVYSFGVVLLELLSG 290
K DV+S ++L +L+G
Sbjct: 269 DAKVDVWSSCCMMLHMLNG 287
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 90/205 (43%), Gaps = 14/205 (6%)
Query: 89 LLGEGGFGFVYKGWIDQHSLSPAKPGS--GMVVAVKKLKPEGFQGHKEWLTEVNYLGQLH 146
+LG+GG+G V++ ++ A G M V K + + E N L ++
Sbjct: 24 VLGKGGYGKVFQ----VRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVK 79
Query: 147 HPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFL 206
HP +V LI G L+ E++ G L L R G A I A G
Sbjct: 80 HPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALG---- 135
Query: 207 HDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAG-PTGDRTHVSTQVMGTHGYAAPEY 265
H + +IYRD K NI+L+ + + KL+DFGL K G TH GT Y APE
Sbjct: 136 HLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHT---FCGTIEYMAPEI 192
Query: 266 VATGRLTTKSDVYSFGVVLLELLSG 290
+ D +S G ++ ++L+G
Sbjct: 193 LMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 91/204 (44%), Gaps = 12/204 (5%)
Query: 89 LLGEGGFGFVYKGWIDQHSLSPAKPGS--GMVVAVKKLKPEGFQGHKEWLTEVNYLGQLH 146
+LG+GG+G V++ ++ A G M V K + + E N L ++
Sbjct: 24 VLGKGGYGKVFQ----VRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVK 79
Query: 147 HPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFL 206
HP +V LI G L+ E++ G L L R G A I A G
Sbjct: 80 HPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALG---- 135
Query: 207 HDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYV 266
H + +IYRD K NI+L+ + + KL+DFGL K D T V+ GT Y APE +
Sbjct: 136 HLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKES-IHDGT-VTHXFCGTIEYMAPEIL 193
Query: 267 ATGRLTTKSDVYSFGVVLLELLSG 290
D +S G ++ ++L+G
Sbjct: 194 MRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 80/158 (50%), Gaps = 11/158 (6%)
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKV 195
L EV L +L HPN++KL + + +V E G L + + +R A R+
Sbjct: 69 LREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIK 128
Query: 196 AIGAAKGLTFLHDAESQVIYRDFKASNILLDA---EFNAKLSDFGLAKAGPTGDRTHVST 252
+ + G+T++H + +++RD K NILL++ + + K+ DFGL+ +
Sbjct: 129 QVFS--GITYMH--KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMK--- 181
Query: 253 QVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+GT Y APE V G K DV+S GV+L LLSG
Sbjct: 182 DRIGTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 80/158 (50%), Gaps = 11/158 (6%)
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKV 195
L EV L +L HPN++KL + + +V E G L + + +R A R+
Sbjct: 69 LREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIK 128
Query: 196 AIGAAKGLTFLHDAESQVIYRDFKASNILLDA---EFNAKLSDFGLAKAGPTGDRTHVST 252
+ + G+T++H + +++RD K NILL++ + + K+ DFGL+ +
Sbjct: 129 QVFS--GITYMH--KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKM---K 181
Query: 253 QVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+GT Y APE V G K DV+S GV+L LLSG
Sbjct: 182 DRIGTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 127/278 (45%), Gaps = 38/278 (13%)
Query: 89 LLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KPEGFQGHKEWL-TEVNYLGQLH 146
LG+GGF Y + + + +G VV L KP KE + TE+ L
Sbjct: 49 FLGKGGFAKCY----EITDMDTKEVFAGKVVPKSMLLKPH----QKEKMSTEIAIHKSLD 100
Query: 147 HPNLVKLIGYCLEGENRLLVYEFMPKGSL-ENHLFRRGPQPLSWAVRMKVAIGAAKGLTF 205
+P++V G+ + + +V E + SL E H R+ M+ I +G+ +
Sbjct: 101 NPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI---QGVQY 157
Query: 206 LHDAESQVIYRDFKASNILLDAEFNAKLSDFGLA-KAGPTGDRTHVSTQVMGTHGYAAPE 264
LH+ ++VI+RD K N+ L+ + + K+ DFGLA K G+R + GT Y APE
Sbjct: 158 LHN--NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---KKTLCGTPNYIAPE 212
Query: 265 YVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMD 324
+ + + D++S G +L LL G K E S + + Y+ K+ + +
Sbjct: 213 VLCKKGHSFEVDIWSLGCILYTLLVG-------KPPFETSCL--KETYIRIKKNEYSV-- 261
Query: 325 TKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLA 362
P+ A+ L + L+ +P LRP ++E+L
Sbjct: 262 -------PRHINPVASALIRRMLHADPTLRPSVAELLT 292
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 80/158 (50%), Gaps = 11/158 (6%)
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKV 195
L EV L +L HPN++KL + + +V E G L + + +R A R+
Sbjct: 69 LREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIK 128
Query: 196 AIGAAKGLTFLHDAESQVIYRDFKASNILLDA---EFNAKLSDFGLAKAGPTGDRTHVST 252
+ + G+T++H + +++RD K NILL++ + + K+ DFGL+ +
Sbjct: 129 QVFS--GITYMH--KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKM---K 181
Query: 253 QVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+GT Y APE V G K DV+S GV+L LLSG
Sbjct: 182 DRIGTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 99/213 (46%), Gaps = 23/213 (10%)
Query: 84 FRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQ---GHKEWLTEVN 140
++ +LG+G FG V + +G AVK + + + L EV
Sbjct: 34 YKGQRVLGKGSFGEV---------ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQ 84
Query: 141 YLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAA 200
L QL HPN++KL + + LV E G L + + R + S ++
Sbjct: 85 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISR--KRFSEVDAARIIRQVL 142
Query: 201 KGLTFLHDAESQVIYRDFKASNILLDA---EFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 257
G+T++H ++++++RD K N+LL++ + N ++ DFGL+ + +GT
Sbjct: 143 SGITYMH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM---KDKIGT 197
Query: 258 HGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
Y APE V G K DV+S GV+L LLSG
Sbjct: 198 AYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 229
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 86/177 (48%), Gaps = 11/177 (6%)
Query: 118 VVAVKKLKPEGFQGHKEWL-TEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 176
+VA+K + E +G + + E+ L ++ HPN+V L G + L+ + + G L
Sbjct: 45 LVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF 104
Query: 177 NHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNIL---LDAEFNAKL 233
+ + +G A R+ + A + +LHD +++RD K N+L LD + +
Sbjct: 105 DRIVEKGFYTERDASRLIFQVLDA--VKYLHDL--GIVHRDLKPENLLYYSLDEDSKIMI 160
Query: 234 SDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
SDFGL+K G V + GT GY APE +A + D +S GV+ LL G
Sbjct: 161 SDFGLSKMEDPG---SVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 100/213 (46%), Gaps = 23/213 (10%)
Query: 84 FRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQ---GHKEWLTEVN 140
++ +LG+G FG V L K +G AVK + + + L EV
Sbjct: 28 YKGQRVLGKGSFGEVI--------LCKDKI-TGQECAVKVISKRQVKQKTDKESLLREVQ 78
Query: 141 YLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAA 200
L QL HPN++KL + + LV E G L + + R + S ++
Sbjct: 79 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISR--KRFSEVDAARIIRQVL 136
Query: 201 KGLTFLHDAESQVIYRDFKASNILLDA---EFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 257
G+T++H ++++++RD K N+LL++ + N ++ DFGL+ + +GT
Sbjct: 137 SGITYMH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM---KDKIGT 191
Query: 258 HGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
Y APE V G K DV+S GV+L LLSG
Sbjct: 192 AYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 86/177 (48%), Gaps = 11/177 (6%)
Query: 118 VVAVKKLKPEGFQGHKEWL-TEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 176
+VA+K + E +G + + E+ L ++ HPN+V L G + L+ + + G L
Sbjct: 45 LVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF 104
Query: 177 NHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNIL---LDAEFNAKL 233
+ + +G A R+ + A + +LHD +++RD K N+L LD + +
Sbjct: 105 DRIVEKGFYTERDASRLIFQVLDA--VKYLHDL--GIVHRDLKPENLLYYSLDEDSKIMI 160
Query: 234 SDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
SDFGL+K G V + GT GY APE +A + D +S GV+ LL G
Sbjct: 161 SDFGLSKMEDPG---SVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 86/177 (48%), Gaps = 11/177 (6%)
Query: 118 VVAVKKLKPEGFQGHKEWL-TEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 176
+VA+K + E +G + + E+ L ++ HPN+V L G + L+ + + G L
Sbjct: 45 LVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF 104
Query: 177 NHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNIL---LDAEFNAKL 233
+ + +G A R+ + A + +LHD +++RD K N+L LD + +
Sbjct: 105 DRIVEKGFYTERDASRLIFQVLDA--VKYLHDL--GIVHRDLKPENLLYYSLDEDSKIMI 160
Query: 234 SDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
SDFGL+K G V + GT GY APE +A + D +S GV+ LL G
Sbjct: 161 SDFGLSKMEDPG---SVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 98/226 (43%), Gaps = 21/226 (9%)
Query: 70 KAFTFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGF 129
+ FT ++ RP LG+G FG VY Q+ A V+ +L+ EG
Sbjct: 9 RKFTIDDFDIV----RP---LGKGKFGNVYLAREKQNKFIMALK----VLFKSQLEKEGV 57
Query: 130 QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSW 189
+ + E+ L HPN++++ Y + + L+ EF P+G L L + G
Sbjct: 58 E--HQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQR 115
Query: 190 AVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTH 249
+ + A L + H E +VI+RD K N+L+ + K++DFG + P+ R
Sbjct: 116 SATFMEEL--ADALHYCH--ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRR-- 169
Query: 250 VSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVD 295
+ GT Y PE + K D++ GV+ E L G D
Sbjct: 170 --RXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 80/166 (48%), Gaps = 13/166 (7%)
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRLL--VYEFMPKGSLENHLFR--RGPQPLSWAV 191
++EVN L +L HPN+V+ ++ N L V E+ G L + + + + Q L
Sbjct: 53 VSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEF 112
Query: 192 RMKVAIGAAKGLTFLH---DAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRT 248
++V L H D V++RD K +N+ LD + N KL DFGLA+
Sbjct: 113 VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI--LNHDE 170
Query: 249 HVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAV 294
+ + +GT Y +PE + KSD++S G +L EL CA+
Sbjct: 171 DFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL----CAL 212
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 98/226 (43%), Gaps = 21/226 (9%)
Query: 70 KAFTFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGF 129
+ FT ++ RP LG+G FG VY Q+ A V+ +L+ EG
Sbjct: 10 RKFTIDDFDIG----RP---LGKGKFGNVYLAREKQNKFIMALK----VLFKSQLEKEGV 58
Query: 130 QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSW 189
+ + E+ L HPN++++ Y + + L+ EF P+G L L + G
Sbjct: 59 E--HQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQR 116
Query: 190 AVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTH 249
+ + A L + H E +VI+RD K N+L+ + K++DFG + P+ R
Sbjct: 117 SATFMEEL--ADALHYCH--ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRR-- 170
Query: 250 VSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVD 295
+ GT Y PE + K D++ GV+ E L G D
Sbjct: 171 --RXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 100/213 (46%), Gaps = 23/213 (10%)
Query: 84 FRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQ---GHKEWLTEVN 140
++ +LG+G FG V L K +G AVK + + + L EV
Sbjct: 51 YKGQRVLGKGSFGEVI--------LCKDKI-TGQECAVKVISKRQVKQKTDKESLLREVQ 101
Query: 141 YLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAA 200
L QL HPN++KL + + LV E G L + + R + S ++
Sbjct: 102 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISR--KRFSEVDAARIIRQVL 159
Query: 201 KGLTFLHDAESQVIYRDFKASNILLDA---EFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 257
G+T++H ++++++RD K N+LL++ + N ++ DFGL+ + +GT
Sbjct: 160 SGITYMH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM---KDKIGT 214
Query: 258 HGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
Y APE V G K DV+S GV+L LLSG
Sbjct: 215 AYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 246
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 98/226 (43%), Gaps = 21/226 (9%)
Query: 70 KAFTFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGF 129
+ FT ++ RP LG+G FG VY Q+ A V+ +L+ EG
Sbjct: 9 RKFTIDDFDIG----RP---LGKGKFGNVYLAREKQNKFIMALK----VLFKSQLEKEGV 57
Query: 130 QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSW 189
+ + E+ L HPN++++ Y + + L+ EF P+G L L + G
Sbjct: 58 E--HQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQR 115
Query: 190 AVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTH 249
+ + A L + H E +VI+RD K N+L+ + K++DFG + P+ R
Sbjct: 116 SATFMEEL--ADALHYCH--ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRR-- 169
Query: 250 VSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVD 295
+ GT Y PE + K D++ GV+ E L G D
Sbjct: 170 --RXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 79/166 (47%), Gaps = 19/166 (11%)
Query: 132 HKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAV 191
H+E E++ L L HPN++KL + + LV EF G L + R A
Sbjct: 90 HEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAA 149
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAE---FNAKLSDFGL----AKAGPT 244
+ I + G+ +LH + +++RD K NILL+ + N K+ DFGL +K
Sbjct: 150 NIMKQILS--GICYLH--KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKL 205
Query: 245 GDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
DR +GT Y APE V + K DV+S GV++ LL G
Sbjct: 206 RDR-------LGTAYYIAPE-VLKKKYNEKCDVWSCGVIMYILLCG 243
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 100/213 (46%), Gaps = 23/213 (10%)
Query: 84 FRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQ---GHKEWLTEVN 140
++ +LG+G FG V L K +G AVK + + + L EV
Sbjct: 52 YKGQRVLGKGSFGEVI--------LCKDKI-TGQECAVKVISKRQVKQKTDKESLLREVQ 102
Query: 141 YLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAA 200
L QL HPN++KL + + LV E G L + + R + S ++
Sbjct: 103 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISR--KRFSEVDAARIIRQVL 160
Query: 201 KGLTFLHDAESQVIYRDFKASNILLDA---EFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 257
G+T++H ++++++RD K N+LL++ + N ++ DFGL+ + +GT
Sbjct: 161 SGITYMH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM---KDKIGT 215
Query: 258 HGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
Y APE V G K DV+S GV+L LLSG
Sbjct: 216 AYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 247
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 112/253 (44%), Gaps = 33/253 (13%)
Query: 48 KGNSESLPTPKSEGE--ILSSSNLKAFTFN---ELKTATRNFRPDSLLGEGGFGFVYKGW 102
+G+ P+PK+E +L + LK + E+ AT R LG G FG V++
Sbjct: 39 RGSRSREPSPKTEDNEGVLLTEKLKPVDYEYREEVHWATHQLR----LGRGSFGEVHRME 94
Query: 103 IDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGEN 162
Q +G AVKK++ E F+ E+ L P +V L G EG
Sbjct: 95 DKQ---------TGFQCAVKKVRLEVFRAE-----ELMACAGLTSPRIVPLYGAVREGPW 140
Query: 163 RLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAA-KGLTFLHDAESQVIYRDFKAS 221
+ E + GSL + +G P R +G A +GL +LH ++++ D KA
Sbjct: 141 VNIFMELLEGGSLGQLVKEQGCLPED---RALYYLGQALEGLEYLHS--RRILHGDVKAD 195
Query: 222 NILLDAE-FNAKLSDFGLA---KAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDV 277
N+LL ++ +A L DFG A + G + GT + APE V K DV
Sbjct: 196 NVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDV 255
Query: 278 YSFGVVLLELLSG 290
+S ++L +L+G
Sbjct: 256 WSSCCMMLHMLNG 268
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 101/224 (45%), Gaps = 30/224 (13%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKP-EGFQGHKEWLTEVNY 141
+F+ SLLGEG +G V S +G +VA+KK++P + L E+
Sbjct: 12 DFQLKSLLGEGAYGVV---------CSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKI 62
Query: 142 LGQLHHPNLVKLIGY----CLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 197
L H N++ + E N + + + + + L + Q LS
Sbjct: 63 LKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI---STQMLSDDHIQYFIY 119
Query: 198 GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAK---------AGPTGDRT 248
+ + LH S VI+RD K SN+L+++ + K+ DFGLA+ + PTG ++
Sbjct: 120 QTLRAVKVLHG--SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQS 177
Query: 249 HVSTQVMGTHGYAAPEYVAT-GRLTTKSDVYSFGVVLLELLSGR 291
+ + + T Y APE + T + + DV+S G +L EL R
Sbjct: 178 GM-VEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 96/203 (47%), Gaps = 20/203 (9%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
+GEG G V L+ K SG VAVK + Q + EV + H N
Sbjct: 53 IGEGSTGIV--------CLAREK-HSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFN 103
Query: 150 LVKLIGYCLEGENRLLVYEFMPKGSLENHL--FRRGPQPLSWAVRMKVAIGAAKGLTFLH 207
+V++ L GE ++ EF+ G+L + + R + ++ V + L +LH
Sbjct: 104 VVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIA-----TVCEAVLQALAYLH 158
Query: 208 DAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVA 267
VI+RD K+ +ILL + KLSDFG A + D ++GT + APE ++
Sbjct: 159 --AQGVIHRDIKSDSILLTLDGRVKLSDFGFC-AQISKDVPK-RKXLVGTPYWMAPEVIS 214
Query: 268 TGRLTTKSDVYSFGVVLLELLSG 290
T+ D++S G++++E++ G
Sbjct: 215 RSLYATEVDIWSLGIMVIEMVDG 237
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 100/221 (45%), Gaps = 35/221 (15%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYL 142
+FR +LG GGFG V+ Q + + + K +G+QG + E L
Sbjct: 189 DFR---VLGRGGFGEVFAC---QMKATGKLYACKKLNKKRLKKRKGYQGA---MVEKKIL 239
Query: 143 GQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLENHLFR--------RGPQPLSWAVRM 193
++H +V L Y E + L LV M G + H++ + P+ + + ++
Sbjct: 240 AKVHSRFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQI 298
Query: 194 KVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLA---KAGPTGDRTHV 250
GL LH + +IYRD K N+LLD + N ++SD GLA KAG T + +
Sbjct: 299 ------VSGLEHLH--QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA 350
Query: 251 STQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 291
GT G+ APE + D ++ GV L E+++ R
Sbjct: 351 -----GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 100/221 (45%), Gaps = 35/221 (15%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYL 142
+FR +LG GGFG V+ Q + + + K +G+QG + E L
Sbjct: 189 DFR---VLGRGGFGEVFAC---QMKATGKLYACKKLNKKRLKKRKGYQGA---MVEKKIL 239
Query: 143 GQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLENHLFR--------RGPQPLSWAVRM 193
++H +V L Y E + L LV M G + H++ + P+ + + ++
Sbjct: 240 AKVHSRFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQI 298
Query: 194 KVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLA---KAGPTGDRTHV 250
GL LH + +IYRD K N+LLD + N ++SD GLA KAG T + +
Sbjct: 299 ------VSGLEHLH--QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA 350
Query: 251 STQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 291
GT G+ APE + D ++ GV L E+++ R
Sbjct: 351 -----GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 96/206 (46%), Gaps = 22/206 (10%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKK-LKPEGFQGHKEW-LTEVNYLGQLHH 147
+GEG +G V+K +G +VA+KK L+ E K+ L E+ L QL H
Sbjct: 11 IGEGSYGVVFKC---------RNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKH 61
Query: 148 PNLVKLIGYCLEGENRLLVYEFMPKGSL-ENHLFRRG-PQPLSWAVRMKVAIGAAKGLTF 205
PNLV L+ LV+E+ L E ++RG P+ L ++ + + + F
Sbjct: 62 PNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQ----TLQAVNF 117
Query: 206 LHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPE- 264
H + I+RD K NIL+ KL DFG A+ TG + +V T Y +PE
Sbjct: 118 CH--KHNCIHRDVKPENILITKHSVIKLCDFGFARLL-TGPSDYYDDEV-ATRWYRSPEL 173
Query: 265 YVATGRLTTKSDVYSFGVVLLELLSG 290
V + DV++ G V ELLSG
Sbjct: 174 LVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 100/221 (45%), Gaps = 35/221 (15%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYL 142
+FR +LG GGFG V+ Q + + + K +G+QG + E L
Sbjct: 189 DFR---VLGRGGFGEVFAC---QMKATGKLYACKKLNKKRLKKRKGYQGA---MVEKKIL 239
Query: 143 GQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLENHLFR--------RGPQPLSWAVRM 193
++H +V L Y E + L LV M G + H++ + P+ + + ++
Sbjct: 240 AKVHSRFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQI 298
Query: 194 KVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLA---KAGPTGDRTHV 250
GL LH + +IYRD K N+LLD + N ++SD GLA KAG T + +
Sbjct: 299 ------VSGLEHLH--QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA 350
Query: 251 STQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 291
GT G+ APE + D ++ GV L E+++ R
Sbjct: 351 -----GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 100/221 (45%), Gaps = 35/221 (15%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYL 142
+FR +LG GGFG V+ Q + + + K +G+QG + E L
Sbjct: 189 DFR---VLGRGGFGEVFAC---QMKATGKLYACKKLNKKRLKKRKGYQGA---MVEKKIL 239
Query: 143 GQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLENHLFR--------RGPQPLSWAVRM 193
++H +V L Y E + L LV M G + H++ + P+ + + ++
Sbjct: 240 AKVHSRFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQI 298
Query: 194 KVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLA---KAGPTGDRTHV 250
GL LH + +IYRD K N+LLD + N ++SD GLA KAG T + +
Sbjct: 299 ------VSGLEHLH--QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA 350
Query: 251 STQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 291
GT G+ APE + D ++ GV L E+++ R
Sbjct: 351 -----GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 97/220 (44%), Gaps = 29/220 (13%)
Query: 81 TRNFRPDSL-----LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVK-----KLKPEGFQ 130
TR+F D LG+G FG VY + S +VA+K +++ EG +
Sbjct: 17 TRHFTIDDFEIGRPLGKGKFGNVYLA---------REKKSHFIVALKVLFKSQIEKEGVE 67
Query: 131 GHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWA 190
+ E+ LHHPN+++L Y + L+ E+ P+G L++ + ++
Sbjct: 68 --HQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGE----LYKELQKSCTFD 121
Query: 191 VRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHV 250
+ I ++ +VI+RD K N+LL + K++DFG + P+ R
Sbjct: 122 EQRTATIMEELADALMYCHGKKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRR--- 178
Query: 251 STQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+ GT Y PE + K D++ GV+ ELL G
Sbjct: 179 -KTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVG 217
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 92/195 (47%), Gaps = 13/195 (6%)
Query: 115 SGMVVAVKKLKPEGF-QGHKEWLTEVNYLGQLHH-PNLVKLIGYCLEGENRLLVYEFMPK 172
+G V+AVK+++ G + +K L +++ + + H P +V+ G + + + E M
Sbjct: 49 TGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM-- 106
Query: 173 GSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAK 232
G+ L +R P+ + K+ + K L +L + VI+RD K SNILLD K
Sbjct: 107 GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHG-VIHRDVKPSNILLDERGQIK 165
Query: 233 LSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYV-----ATGRLTTKSDVYSFGVVLLEL 287
L DFG+ +G D + G Y APE + ++DV+S G+ L+EL
Sbjct: 166 LCDFGI--SGRLVD-DKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVEL 222
Query: 288 LSGRCAVDKTKVGIE 302
+G+ K E
Sbjct: 223 ATGQFPYKNCKTDFE 237
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 92/189 (48%), Gaps = 34/189 (17%)
Query: 129 FQGHKEWLTEVNYLGQ--LHHPNLVKLIGYCLEGENR----LLVYEFMPKGSLENHLFRR 182
Q + W +E + H NL++ I G N L+ F KGSL ++L +
Sbjct: 48 LQDKQSWQSEREIFSTPGMKHENLLQFIAAEKRGSNLEVELWLITAFHDKGSLTDYL--K 105
Query: 183 GPQPLSWAVRMKVAIGAAKGLTFLHDA---------ESQVIYRDFKASNILLDAEFNAKL 233
G ++W VA ++GL++LH+ + + +RDFK+ N+LL ++ A L
Sbjct: 106 G-NIITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVL 164
Query: 234 SDFGLAK----AGPTGDRTHVSTQVMGTHGYAAPEYVATGRLT------TKSDVYSFGVV 283
+DFGLA P GD TH +GT Y APE V G + + D+Y+ G+V
Sbjct: 165 ADFGLAVRFEPGKPPGD-THGQ---VGTRRYMAPE-VLEGAINFQRDAFLRIDMYAMGLV 219
Query: 284 LLELLSGRC 292
L EL+S RC
Sbjct: 220 LWELVS-RC 227
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 96/222 (43%), Gaps = 28/222 (12%)
Query: 80 ATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWL--- 136
AT + P + +G G +G VYK P SG VA+K ++ G L
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKA---------RDPHSGHFVALKSVRVPNGGGGGGGLPIS 57
Query: 137 --TEVNYLGQLH---HPNLVKLIGYCLEGENR-----LLVYEFMPKGSLENHLFRRGPQP 186
EV L +L HPN+V+L+ C LV+E + + L +L + P
Sbjct: 58 TVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPG 116
Query: 187 LSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGD 246
L + +GL FLH + +++RD K NIL+ + KL+DFGLA+
Sbjct: 117 LPAETIKDLMRQFLRGLDFLH--ANCIVHRDLKPENILVTSGGTVKLADFGLAR---IYS 171
Query: 247 RTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELL 288
T V+ T Y APE + T D++S G + E+
Sbjct: 172 YQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 213
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 86/177 (48%), Gaps = 11/177 (6%)
Query: 118 VVAVKKLKPEGFQGHKEWL-TEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 176
+VA+K + + +G + + E+ L ++ HPN+V L G + L+ + + G L
Sbjct: 45 LVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF 104
Query: 177 NHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNIL---LDAEFNAKL 233
+ + +G A R+ + A + +LHD +++RD K N+L LD + +
Sbjct: 105 DRIVEKGFYTERDASRLIFQVLDA--VKYLHDL--GIVHRDLKPENLLYYSLDEDSKIMI 160
Query: 234 SDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
SDFGL+K G V + GT GY APE +A + D +S GV+ LL G
Sbjct: 161 SDFGLSKMEDPGS---VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 98/213 (46%), Gaps = 23/213 (10%)
Query: 84 FRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQ---GHKEWLTEVN 140
++ +LG+G FG V L K +G AVK + + + L EV
Sbjct: 28 YKGQRVLGKGSFGEVI--------LCKDKI-TGQECAVKVISKRQVKQKTDKESLLREVQ 78
Query: 141 YLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAA 200
L QL HPN+ KL + + LV E G L + + R + S ++
Sbjct: 79 LLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISR--KRFSEVDAARIIRQVL 136
Query: 201 KGLTFLHDAESQVIYRDFKASNILLDA---EFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 257
G+T+ H ++++++RD K N+LL++ + N ++ DFGL+ + +GT
Sbjct: 137 SGITYXH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKX---KDKIGT 191
Query: 258 HGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
Y APE V G K DV+S GV+L LLSG
Sbjct: 192 AYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 97/206 (47%), Gaps = 23/206 (11%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLK----PEGFQGHKEWLTEVNYLGQL 145
+GEG +G VYK A+ G A+KK++ EG + E++ L +L
Sbjct: 10 IGEGTYGVVYK----------AQNNYGETFALKKIRLEKEDEGIPSTT--IREISILKEL 57
Query: 146 HHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTF 205
H N+VKL + +LV+E + + L L + G+ +
Sbjct: 58 KHSNIVKLYDVIHTKKRLVLVFEHLDQDL--KKLLDVCEGGLESVTAKSFLLQLLNGIAY 115
Query: 206 LHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEY 265
HD +V++RD K N+L++ E K++DFGLA+A R + T + T Y AP+
Sbjct: 116 CHD--RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY--THEIVTLWYRAPDV 171
Query: 266 V-ATGRLTTKSDVYSFGVVLLELLSG 290
+ + + +T D++S G + E+++G
Sbjct: 172 LMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 99/207 (47%), Gaps = 23/207 (11%)
Query: 89 LLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHP 148
+LG G FG V+K + +G+ +A K +K G + +E E++ + QL H
Sbjct: 96 ILGGGRFGQVHKC---------EETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHA 146
Query: 149 NLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQ--PLSWAVRMKVAIGAAKGLTFL 206
NL++L + +LV E++ G L + + L + MK +G+ +
Sbjct: 147 NLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMK---QICEGIRHM 203
Query: 207 HDAESQVIYRDFKASNILL---DAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAP 263
H + +++ D K NIL DA+ K+ DFGLA+ ++ V+ GT + AP
Sbjct: 204 H--QMYILHLDLKPENILCVNRDAK-QIKIIDFGLARRYKPREKLKVN---FGTPEFLAP 257
Query: 264 EYVATGRLTTKSDVYSFGVVLLELLSG 290
E V ++ +D++S GV+ LLSG
Sbjct: 258 EVVNYDFVSFPTDMWSVGVIAYMLLSG 284
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 97/206 (47%), Gaps = 23/206 (11%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLK----PEGFQGHKEWLTEVNYLGQL 145
+GEG +G VYK A+ G A+KK++ EG + E++ L +L
Sbjct: 10 IGEGTYGVVYK----------AQNNYGETFALKKIRLEKEDEGIPSTT--IREISILKEL 57
Query: 146 HHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTF 205
H N+VKL + +LV+E + + L L + G+ +
Sbjct: 58 KHSNIVKLYDVIHTKKRLVLVFEHLDQDL--KKLLDVCEGGLESVTAKSFLLQLLNGIAY 115
Query: 206 LHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEY 265
HD +V++RD K N+L++ E K++DFGLA+A R + T + T Y AP+
Sbjct: 116 CHD--RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY--THEVVTLWYRAPDV 171
Query: 266 V-ATGRLTTKSDVYSFGVVLLELLSG 290
+ + + +T D++S G + E+++G
Sbjct: 172 LMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 97/206 (47%), Gaps = 23/206 (11%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLK----PEGFQGHKEWLTEVNYLGQL 145
+GEG +G VYK A+ G A+KK++ EG + E++ L +L
Sbjct: 10 IGEGTYGVVYK----------AQNNYGETFALKKIRLEKEDEGIPSTT--IREISILKEL 57
Query: 146 HHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTF 205
H N+VKL + +LV+E + + L L + G+ +
Sbjct: 58 KHSNIVKLYDVIHTKKRLVLVFEHLDQDL--KKLLDVCEGGLESVTAKSFLLQLLNGIAY 115
Query: 206 LHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEY 265
HD +V++RD K N+L++ E K++DFGLA+A R + T + T Y AP+
Sbjct: 116 CHD--RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY--THEVVTLWYRAPDV 171
Query: 266 V-ATGRLTTKSDVYSFGVVLLELLSG 290
+ + + +T D++S G + E+++G
Sbjct: 172 LMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 102/226 (45%), Gaps = 38/226 (16%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKE---WLTEVNYLGQLH 146
LG+G +G V+K ID+ + G VVAVKK+ + FQ + E+ L +L
Sbjct: 17 LGKGAYGIVWKS-IDRRT--------GEVVAVKKI-FDAFQNSTDAQRTFREIMILTELS 66
Query: 147 -HPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTF 205
H N+V L+ L +N VY + H R L + V K + +
Sbjct: 67 GHENIVNLLN-VLRADNDRDVYLVFDYMETDLHAVIRA-NILEPVHKQYVVYQLIKVIKY 124
Query: 206 LHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPT-------------------GD 246
LH +++RD K SNILL+AE + K++DFGL+++ D
Sbjct: 125 LHSG--GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDD 182
Query: 247 RTHVSTQVMGTHGYAAPEY-VATGRLTTKSDVYSFGVVLLELLSGR 291
+ T + T Y APE + + + T D++S G +L E+L G+
Sbjct: 183 DQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 122/291 (41%), Gaps = 49/291 (16%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
+GEG FG K + + + G V+ + + +E EV L + HPN
Sbjct: 32 IGEGSFG---KAIL----VKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPN 84
Query: 150 LVKLIGYCLEGENRLLVYEFMPKGSL------ENHLFRRGPQPLSWAVRMKVAIGAAKGL 203
+V+ E + +V ++ G L + + + Q L W V++ +A L
Sbjct: 85 IVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLA------L 138
Query: 204 TFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAP 263
+HD ++++RD K+ NI L + +L DFG+A+ ++ +GT Y +P
Sbjct: 139 KHVHD--RKILHRDIKSQNIFLTKDGTVQLGDFGIARV--LNSTVELARACIGTPYYLSP 194
Query: 264 EYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIM 323
E KSD+++ G VL EL + + A + S K + +I
Sbjct: 195 EICENKPYNNKSDIWALGCVLYELCTLKHAFEAG----------------SMKNLVLKI- 237
Query: 324 DTKLGGQYPQKAAHTAA---TLALQCLNNEPKLRPRMSEVLA---ILERLE 368
+ G +P + H + +L Q P+ RP ++ +L I +R+E
Sbjct: 238 ---ISGSFPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKRIE 285
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 113/257 (43%), Gaps = 22/257 (8%)
Query: 114 GSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLE--GENRLLVYEFMP 171
G+ +VV V K++ + +++ E L HPN++ ++G C + L+ +MP
Sbjct: 33 GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMP 92
Query: 172 KGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNA 231
GSL N L + + +K A+ A+G+ FLH E + + ++++D + A
Sbjct: 93 YGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTA 152
Query: 232 KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 291
++S + + + R + V PE T R + +D++SF V+L EL++
Sbjct: 153 RISMADVKFSFQSPGRMYAPAWVAPEALQKKPE--DTNRRS--ADMWSFAVLLWELVTR- 207
Query: 292 CAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEP 351
E D LS+ ++ L P + + L C+N +P
Sbjct: 208 ----------EVPFAD-----LSNMEIGMKVALEGLRPTIPPGISPHVSKLMKICMNEDP 252
Query: 352 KLRPRMSEVLAILERLE 368
RP+ ++ ILE+++
Sbjct: 253 AKRPKFDMIVPILEKMQ 269
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 103/236 (43%), Gaps = 29/236 (12%)
Query: 69 LKAFTFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEG 128
LKA +F+ + +G G +G V S + +G VA+KK+ P
Sbjct: 42 LKARSFDVTFDVGDEYEIIETIGNGAYGVVS---------SARRRLTGQQVAIKKI-PNA 91
Query: 129 FQ---GHKEWLTEVNYLGQLHHPNLVKL-------IGYCLEGENRLLVYEFMPKGSLENH 178
F K L E+ L H N++ + + Y GE + VY + + H
Sbjct: 92 FDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPY---GEFKS-VYVVLDLMESDLH 147
Query: 179 LFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGL 238
QPL+ +GL ++H A QVI+RD K SN+L++ K+ DFG+
Sbjct: 148 QIIHSSQPLTLEHVRYFLYQLLRGLKYMHSA--QVIHRDLKPSNLLVNENCELKIGDFGM 205
Query: 239 AKAGPTGDRTH--VSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 291
A+ T H T+ + T Y APE + + T++ D++S G + E+L+ R
Sbjct: 206 ARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARR 261
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 39/232 (16%)
Query: 83 NFRPDSLLGEGGFGFVY--KGWIDQHSLSPAKPGSGMVVAVKKLK-PEGFQGHKEWLTEV 139
+F P LG GGFG V+ K +D + A+K+++ P ++ + EV
Sbjct: 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNY-----------AIKRIRLPNRELAREKVMREV 54
Query: 140 NYLGQLHHPNLVKLIGYCLEGEN---------RLLVY---EFMPKGSLENHLFRRGP-QP 186
L +L HP +V+ LE ++ +Y + K +L++ + R +
Sbjct: 55 KALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEE 114
Query: 187 LSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGD 246
+V + + + A+ + FLH +++RD K SNI + K+ DFGL A +
Sbjct: 115 RERSVCLHIFLQIAEAVEFLHS--KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDE 172
Query: 247 RTHV----------STQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELL 288
T +GT Y +PE + + K D++S G++L ELL
Sbjct: 173 EEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 106/227 (46%), Gaps = 30/227 (13%)
Query: 138 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSL-ENHLFRRG-PQPLSWAVRMKV 195
E++ L H ++V G+ + + +V E + SL E H R+ +P + ++
Sbjct: 91 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI 150
Query: 196 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLA-KAGPTGDRTHVSTQV 254
+G +LH ++VI+RD K N+ L+ + K+ DFGLA K G+R V +
Sbjct: 151 VLGCQ----YLH--RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---L 201
Query: 255 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 314
GT Y APE ++ + + DV+S G ++ LL G+ + + + + YL
Sbjct: 202 CGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL---------KETYLR 252
Query: 315 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 361
K+ + I P+ AA+L + L +P RP ++E+L
Sbjct: 253 IKKNEYSI---------PKHINPVAASLIQKMLQTDPTARPTINELL 290
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 104/236 (44%), Gaps = 29/236 (12%)
Query: 69 LKAFTFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEG 128
LKA +F+ + +G G +G V S + +G VA+KK+ P
Sbjct: 41 LKARSFDVTFDVGDEYEIIETIGNGAYGVVS---------SARRRLTGQQVAIKKI-PNA 90
Query: 129 FQ---GHKEWLTEVNYLGQLHHPNLVKL-------IGYCLEGENRLLVYEFMPKGSLENH 178
F K L E+ L H N++ + + Y GE + VY + + H
Sbjct: 91 FDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPY---GEFKS-VYVVLDLMESDLH 146
Query: 179 LFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGL 238
QPL+ +GL ++H A QVI+RD K SN+L++ K+ DFG+
Sbjct: 147 QIIHSSQPLTLEHVRYFLYQLLRGLKYMHSA--QVIHRDLKPSNLLVNENCELKIGDFGM 204
Query: 239 AKAGPT--GDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 291
A+ T + + T+ + T Y APE + + T++ D++S G + E+L+ R
Sbjct: 205 ARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARR 260
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 104/238 (43%), Gaps = 28/238 (11%)
Query: 66 SSNLKAFTFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLK 125
+ +L + L+ F L+G G +G VYKG +H +G + A+K +
Sbjct: 8 ARSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKG---RHV------KTGQLAAIKVMD 58
Query: 126 PEGFQGHKEWLTEVNYLGQL-HHPNLVKLIGYCLE------GENRLLVYEFMPKGSLENH 178
G + +E E+N L + HH N+ G ++ + LV EF GS+ +
Sbjct: 59 VTGDE-EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDL 117
Query: 179 LFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGL 238
+ L + +GL+ LH + +VI+RD K N+LL KL DFG+
Sbjct: 118 IKNTKGNTLKEEWIAYICREILRGLSHLH--QHKVIHRDIKGQNVLLTENAEVKLVDFGV 175
Query: 239 -AKAGPTGDRTHVSTQVMGTHGYAAPEYVATGR-----LTTKSDVYSFGVVLLELLSG 290
A+ T R + +GT + APE +A KSD++S G+ +E+ G
Sbjct: 176 SAQLDRTVGRRNT---FIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 106/227 (46%), Gaps = 30/227 (13%)
Query: 138 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSL-ENHLFRRG-PQPLSWAVRMKV 195
E++ L H ++V G+ + + +V E + SL E H R+ +P + ++
Sbjct: 89 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI 148
Query: 196 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLA-KAGPTGDRTHVSTQV 254
+G +LH ++VI+RD K N+ L+ + K+ DFGLA K G+R V +
Sbjct: 149 VLGCQ----YLH--RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---L 199
Query: 255 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 314
GT Y APE ++ + + DV+S G ++ LL G+ + + + + YL
Sbjct: 200 CGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL---------KETYLR 250
Query: 315 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 361
K+ + I P+ AA+L + L +P RP ++E+L
Sbjct: 251 IKKNEYSI---------PKHINPVAASLIQKMLQTDPTARPTINELL 288
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 85/176 (48%), Gaps = 29/176 (16%)
Query: 138 EVNYLGQLHHPNLVKLIGYCLEGE----NRLLVYEFMPKGSLENHLFRRGPQPLSWAVRM 193
EV L + H N+++ IG G + L+ F KGSL + L +SW
Sbjct: 68 EVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFL---KANVVSWNELC 124
Query: 194 KVAIGAAKGLTFLHDA--------ESQVIYRDFKASNILLDAEFNAKLSDFGLA---KAG 242
+A A+GL +LH+ + + +RD K+ N+LL A ++DFGLA +AG
Sbjct: 125 HIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAG 184
Query: 243 PTGDRTHVSTQVMGTHGYAAPEYVATGRLT------TKSDVYSFGVVLLELLSGRC 292
+ TH QV GT Y APE V G + + D+Y+ G+VL EL S RC
Sbjct: 185 KSAGDTH--GQV-GTRRYMAPE-VLEGAINFQRDAFLRIDMYAMGLVLWELAS-RC 235
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 76/159 (47%), Gaps = 17/159 (10%)
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 191
L E L ++ P LVKL + N +V E+MP G + +HL R G P +A
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAA 148
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
++ LTF + +IYRD K N+L+D + K++DFG AK RT
Sbjct: 149 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKR--VKGRT--- 195
Query: 252 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 76/159 (47%), Gaps = 17/159 (10%)
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 191
L E L ++ P LVKL + N +V E+MP G + +HL R G P +A
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAA 148
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
++ LTF + +IYRD K N+L+D + K++DFG AK RT
Sbjct: 149 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKR--VKGRT--- 195
Query: 252 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 80/162 (49%), Gaps = 14/162 (8%)
Query: 136 LTEVNYLGQLH-HPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMK 194
L EV+ L ++ HPN+++L LV++ M KG L ++L + LS K
Sbjct: 58 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK--VTLSEKETRK 115
Query: 195 VAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV 254
+ + + LH + +++RD K NILLD + N KL+DFG + G++ +V
Sbjct: 116 IMRALLEVICALH--KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR---EV 170
Query: 255 MGTHGYAAPEYVATGR------LTTKSDVYSFGVVLLELLSG 290
GT Y APE + + D++S GV++ LL+G
Sbjct: 171 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 212
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 93/214 (43%), Gaps = 27/214 (12%)
Query: 82 RNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNY 141
R + D +G G F VYKG + ++ A + +KL Q KE E
Sbjct: 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVA----WCELQDRKLTKSERQRFKE---EAEX 78
Query: 142 LGQLHHPNLVKLIGY---CLEGENRL-LVYEFMPKGSLENHLFRRGPQPL----SWAVRM 193
L L HPN+V+ ++G+ + LV E G+L+ +L R + SW ++
Sbjct: 79 LKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQI 138
Query: 194 KVAIGAAKGLTFLHDAESQVIYRDFKASNILLDA-EFNAKLSDFGLAKAGPTGDRTHVST 252
KGL FLH +I+RD K NI + + K+ D GLA T R +
Sbjct: 139 ------LKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLA----TLKRASFAK 188
Query: 253 QVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLE 286
V+GT + APE + DVY+FG LE
Sbjct: 189 AVIGTPEFXAPEXYEE-KYDESVDVYAFGXCXLE 221
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 80/162 (49%), Gaps = 14/162 (8%)
Query: 136 LTEVNYLGQLH-HPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMK 194
L EV+ L ++ HPN+++L LV++ M KG L ++L + LS K
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK--VTLSEKETRK 128
Query: 195 VAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV 254
+ + + LH + +++RD K NILLD + N KL+DFG + G++ +V
Sbjct: 129 IMRALLEVICALH--KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR---EV 183
Query: 255 MGTHGYAAPEYVATGR------LTTKSDVYSFGVVLLELLSG 290
GT Y APE + + D++S GV++ LL+G
Sbjct: 184 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 103/229 (44%), Gaps = 30/229 (13%)
Query: 137 TEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRGPQPLSWAVRMKV 195
TE+ L L H ++ +L + LE N++ +V E+ P G L +++ + LS V
Sbjct: 57 TEIEALKNLRHQHICQLY-HVLETANKIFMVLEYCPGGELFDYIISQ--DRLSEEETRVV 113
Query: 196 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVM 255
+ ++H +RD K N+L D KL DFGL A P G++ +
Sbjct: 114 FRQIVSAVAYVH--SQGYAHRDLKPENLLFDEYHKLKLIDFGLC-AKPKGNKDYHLQTCC 170
Query: 256 GTHGYAAPEYV-ATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 314
G+ YAAPE + L +++DV+S G++L L+ G D V ++
Sbjct: 171 GSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNV-------------MA 217
Query: 315 DKRKLFRIMDTKLGGQY--PQKAAHTAATLALQCLNNEPKLRPRMSEVL 361
+K+ R G+Y P+ + ++ L Q L +PK R M +L
Sbjct: 218 LYKKIMR-------GKYDVPKWLSPSSILLLQQMLQVDPKKRISMKNLL 259
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 106/227 (46%), Gaps = 30/227 (13%)
Query: 138 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSL-ENHLFRRG-PQPLSWAVRMKV 195
E++ L H ++V G+ + + +V E + SL E H R+ +P + ++
Sbjct: 65 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI 124
Query: 196 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLA-KAGPTGDRTHVSTQV 254
+G +LH ++VI+RD K N+ L+ + K+ DFGLA K G+R V +
Sbjct: 125 VLGCQ----YLH--RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---L 175
Query: 255 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 314
GT Y APE ++ + + DV+S G ++ LL G+ + + + + YL
Sbjct: 176 CGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL---------KETYLR 226
Query: 315 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 361
K+ + I P+ AA+L + L +P RP ++E+L
Sbjct: 227 IKKNEYSI---------PKHINPVAASLIQKMLQTDPTARPTINELL 264
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 121/280 (43%), Gaps = 40/280 (14%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWL-TEVNYLGQLHHP 148
LG G FG V+ +++ S SG+ +K + + Q E + E+ L L HP
Sbjct: 30 LGSGAFGDVH--LVEERS-------SGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHP 80
Query: 149 NLVKLIGYCLEGENRLLVYEFMPKGSLENHLFR---RGPQPLSWAVRMKVAIGAAKGLTF 205
N++K+ + N +V E G L + RG + LS ++ L +
Sbjct: 81 NIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARG-KALSEGYVAELMKQMMNALAY 139
Query: 206 LHDAESQVIYRDFKASNILL-DAEFNA--KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAA 262
H V+++D K NIL D ++ K+ DFGLA+ + + ST GT Y A
Sbjct: 140 FHS--QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEH---STNAAGTALYMA 194
Query: 263 PEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKP-YLSDKRKLFR 321
PE V +T K D++S GVV+ LL+G T + Q + +P Y + R L
Sbjct: 195 PE-VFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPL-- 251
Query: 322 IMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 361
PQ A L Q L +P+ RP ++VL
Sbjct: 252 ---------TPQ-----AVDLLKQMLTKDPERRPSAAQVL 277
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 132/301 (43%), Gaps = 44/301 (14%)
Query: 89 LLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHP 148
+LG+G +G VY G LS + + +A+K++ + + E+ L H
Sbjct: 29 VLGKGTYGIVYAG----RDLS-----NQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHK 79
Query: 149 NLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIG-----AAKGL 203
N+V+ +G E + E +P GSL + L R PL + IG +GL
Sbjct: 80 NIVQYLGSFSENGFIKIFMEQVPGGSL-SALLRSKWGPLK---DNEQTIGFYTKQILEGL 135
Query: 204 TFLHDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAA 262
+LHD +Q+++RD K N+L++ K+SDFG +K + GT Y A
Sbjct: 136 KYLHD--NQIVHRDIKGDNVLINTYSGVLKISDFGTSKR--LAGINPCTETFTGTLQYMA 191
Query: 263 PEYVATG--RLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLF 320
PE + G +D++S G ++E+ +G+ + +P + +F
Sbjct: 192 PEIIDKGPRGYGKAADIWSLGCTIIEMATGK-----------PPFYELGEP----QAAMF 236
Query: 321 RIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEAPKNSAKLSQSE 380
++ K+ + P+ + A L+C +P R +++L E K S+K +++
Sbjct: 237 KVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVD----EFLKVSSKKKKTQ 292
Query: 381 P 381
P
Sbjct: 293 P 293
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 106/223 (47%), Gaps = 26/223 (11%)
Query: 77 LKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPE-GFQGHK-E 134
L A + + + +GEG +G V+K K G G VA+K+++ + G +G
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKA-------RDLKNG-GRFVALKRVRVQTGEEGMPLS 57
Query: 135 WLTEVNYLGQLH---HPNLVKLIGYCL----EGENRL-LVYEFMPKGSLENHLFRRGPQP 186
+ EV L L HPN+V+L C + E +L LV+E + + L +L + P+P
Sbjct: 58 TIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYL-DKVPEP 115
Query: 187 LSWAVRMK-VAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 245
+K + +GL FLH +V++RD K NIL+ + KL+DFGLA+
Sbjct: 116 GVPTETIKDMMFQLLRGLDFLH--SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSF- 172
Query: 246 DRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELL 288
T V+ T Y APE + T D++S G + E+
Sbjct: 173 --QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 105/227 (46%), Gaps = 30/227 (13%)
Query: 138 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSL-ENHLFRRG-PQPLSWAVRMKV 195
E++ L H ++V G+ + + +V E + SL E H R+ +P + ++
Sbjct: 71 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI 130
Query: 196 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLA-KAGPTGDRTHVSTQV 254
+G +LH ++VI+RD K N+ L+ + K+ DFGLA K G+R +
Sbjct: 131 VLGCQ----YLH--RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER---KKTL 181
Query: 255 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 314
GT Y APE ++ + + DV+S G ++ LL G+ + + + + YL
Sbjct: 182 CGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL---------KETYLR 232
Query: 315 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 361
K+ + I P+ AA+L + L +P RP ++E+L
Sbjct: 233 IKKNEYSI---------PKHINPVAASLIQKMLQTDPTARPTINELL 270
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 134/304 (44%), Gaps = 43/304 (14%)
Query: 89 LLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHP 148
++G G FG VY+ + SG +VA+KK+ Q + E+ + +L H
Sbjct: 27 VIGNGSFGVVYQAKLCD---------SGELVAIKKV----LQDKRFKNRELQIMRKLDHC 73
Query: 149 NLVKL-IGYCLEGENRLLVY-----EFMPKG--SLENHLFRRGPQPLSWAVRMKVAIGAA 200
N+V+L + GE + +VY +++P+ + H + R Q L
Sbjct: 74 NIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQLF 132
Query: 201 KGLTFLHDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHG 259
+ L ++H + +RD K N+LLD + KL DFG AK G+ + + +
Sbjct: 133 RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRY 187
Query: 260 YAAPEYV-ATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRK 318
Y APE + T+ DV+S G VL ELL G+ + G++Q LV+ K + R+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQ-LVEIIKVLGTPTRE 245
Query: 319 LFRIMDTKLGG-QYPQKAAHTAATLALQCLNNEPKLRPRM-SEVLAILERLEAPKNSAKL 376
R M+ ++PQ AH + RPR E +A+ RL +A+L
Sbjct: 246 QIREMNPNYTEFKFPQIKAHPWTKV----------FRPRTPPEAIALCSRLLEYTPTARL 295
Query: 377 SQSE 380
+ E
Sbjct: 296 TPLE 299
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 79/162 (48%), Gaps = 14/162 (8%)
Query: 136 LTEVNYLGQLH-HPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMK 194
L EV+ L ++ HPN+++L LV++ M KG L ++L + LS K
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK--VTLSEKETRK 128
Query: 195 VAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV 254
+ + + LH + +++RD K NILLD + N KL+DFG + G++ V
Sbjct: 129 IMRALLEVICALH--KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR---SV 183
Query: 255 MGTHGYAAPEYVATGR------LTTKSDVYSFGVVLLELLSG 290
GT Y APE + + D++S GV++ LL+G
Sbjct: 184 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 109/247 (44%), Gaps = 26/247 (10%)
Query: 52 ESLPTPKSEGEILSSSNLKAFTFNELKTATRNFRPDSLLGEGGFGFVY-KGWIDQHSLSP 110
E L T K E L ++NL T + K NF +LG G +G V+ I H
Sbjct: 30 EQLLTVKHE---LRTANL---TGHAEKVGIENFELLKVLGTGAYGKVFLVRKISGHD--- 80
Query: 111 AKPGSGMVVAVKKLKPEGF----QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRL-L 165
+G + A+K LK + + TE L + + + Y + E +L L
Sbjct: 81 ----TGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHL 136
Query: 166 VYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILL 225
+ +++ G L HL +R +++ +G L H + +IYRD K NILL
Sbjct: 137 ILDYINGGELFTHLSQRERFTEH---EVQIYVGEIV-LALEHLHKLGIIYRDIKLENILL 192
Query: 226 DAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGR--LTTKSDVYSFGVV 283
D+ + L+DFGL+K D T + GT Y AP+ V G D +S GV+
Sbjct: 193 DSNGHVVLTDFGLSKE-FVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVL 251
Query: 284 LLELLSG 290
+ ELL+G
Sbjct: 252 MYELLTG 258
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 105/227 (46%), Gaps = 30/227 (13%)
Query: 138 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSL-ENHLFRRG-PQPLSWAVRMKV 195
E++ L H ++V G+ + + +V E + SL E H R+ +P + ++
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI 126
Query: 196 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLA-KAGPTGDRTHVSTQV 254
+G +LH ++VI+RD K N+ L+ + K+ DFGLA K G+R +
Sbjct: 127 VLGCQ----YLH--RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER---KKTL 177
Query: 255 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 314
GT Y APE ++ + + DV+S G ++ LL G+ + + + + YL
Sbjct: 178 CGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL---------KETYLR 228
Query: 315 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 361
K+ + I P+ AA+L + L +P RP ++E+L
Sbjct: 229 IKKNEYSI---------PKHINPVAASLIQKMLQTDPTARPTINELL 266
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 105/227 (46%), Gaps = 30/227 (13%)
Query: 138 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSL-ENHLFRRG-PQPLSWAVRMKV 195
E++ L H ++V G+ + + +V E + SL E H R+ +P + ++
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI 126
Query: 196 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLA-KAGPTGDRTHVSTQV 254
+G +LH ++VI+RD K N+ L+ + K+ DFGLA K G+R +
Sbjct: 127 VLGCQ----YLH--RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER---KKTL 177
Query: 255 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 314
GT Y APE ++ + + DV+S G ++ LL G+ + + + + YL
Sbjct: 178 CGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL---------KETYLR 228
Query: 315 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 361
K+ + I P+ AA+L + L +P RP ++E+L
Sbjct: 229 IKKNEYSI---------PKHINPVAASLIQKMLQTDPTARPTINELL 266
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 100/204 (49%), Gaps = 17/204 (8%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGH-KEWLTEVNYLGQLHHP 148
LGEG + VYKG + +VA+K+++ E +G + EV+ L L H
Sbjct: 10 LGEGTYATVYKG---------KSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHA 60
Query: 149 NLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHD 208
N+V L ++ LV+E++ K L+ +L G V++ +GL + H
Sbjct: 61 NIVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKL-FLFQLLRGLAYCH- 117
Query: 209 AESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEY-VA 267
+V++RD K N+L++ KL+DFGLA+A +T+ + V T Y P+ +
Sbjct: 118 -RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV--TLWYRPPDILLG 174
Query: 268 TGRLTTKSDVYSFGVVLLELLSGR 291
+ +T+ D++ G + E+ +GR
Sbjct: 175 STDYSTQIDMWGVGCIFYEMATGR 198
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 106/223 (47%), Gaps = 26/223 (11%)
Query: 77 LKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPE-GFQGHK-E 134
L A + + + +GEG +G V+K K G G VA+K+++ + G +G
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKA-------RDLKNG-GRFVALKRVRVQTGEEGMPLS 57
Query: 135 WLTEVNYLGQLH---HPNLVKLIGYCL----EGENRL-LVYEFMPKGSLENHLFRRGPQP 186
+ EV L L HPN+V+L C + E +L LV+E + + L +L + P+P
Sbjct: 58 TIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYL-DKVPEP 115
Query: 187 LSWAVRMK-VAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 245
+K + +GL FLH +V++RD K NIL+ + KL+DFGLA+
Sbjct: 116 GVPTETIKDMMFQLLRGLDFLH--SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSF- 172
Query: 246 DRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELL 288
T V+ T Y APE + T D++S G + E+
Sbjct: 173 --QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 133/304 (43%), Gaps = 43/304 (14%)
Query: 89 LLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHP 148
++G G FG VY+ + SG +VA+KK+ QG E+ + +L H
Sbjct: 27 VIGNGSFGVVYQAKLCD---------SGELVAIKKV----LQGKAFKNRELQIMRKLDHC 73
Query: 149 NLVKL-IGYCLEGENRLLVY-----EFMPKG--SLENHLFRRGPQPLSWAVRMKVAIGAA 200
N+V+L + GE + VY +++P+ + H + R Q L
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQLF 132
Query: 201 KGLTFLHDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHG 259
+ L ++H + +RD K N+LLD + KL DFG AK G+ + + +
Sbjct: 133 RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICSRY 187
Query: 260 YAAPEYV-ATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRK 318
Y APE + T+ DV+S G VL ELL G+ + G++Q LV+ K + R+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQ-LVEIIKVLGTPTRE 245
Query: 319 LFRIMDTKLGG-QYPQKAAHTAATLALQCLNNEPKLRPRM-SEVLAILERLEAPKNSAKL 376
R M+ ++PQ AH + RPR E +A+ RL +A+L
Sbjct: 246 QIREMNPNYTEFKFPQIKAHPWTKV----------FRPRTPPEAIALCSRLLEYTPTARL 295
Query: 377 SQSE 380
+ E
Sbjct: 296 TPLE 299
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 95/216 (43%), Gaps = 27/216 (12%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKE---WLTEV 139
+F ++G+G FG K + +H + AVK L+ + KE ++E
Sbjct: 39 DFHFLKVIGKGSFG---KVLLARHK------AEEVFYAVKVLQKKAILKKKEEKHIMSER 89
Query: 140 NYL-GQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRR----GPQPLSWAVRMK 194
N L + HP LV L + V +++ G L HL R P+ +A +
Sbjct: 90 NVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIA 149
Query: 195 VAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV 254
A+G +LH ++YRD K NILLD++ + L+DFGL K + T ++
Sbjct: 150 SALG------YLHSL--NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNST--TSTF 199
Query: 255 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
GT Y APE + D + G VL E+L G
Sbjct: 200 CGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYG 235
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 101/232 (43%), Gaps = 41/232 (17%)
Query: 78 KTATRNFRPDSLLGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWL 136
+T R +G+G +G V++G W G VAVK Q W
Sbjct: 4 RTVARQVALVECVGKGRYGEVWRGLW------------HGESVAVKIFSSRDEQS---WF 48
Query: 137 --TEVNYLGQLHHPNLVKLIGYCLEGENR----LLVYEFMPKGSLENHLFRRGPQPLSWA 190
TE+ L H N++ I + N L+ + GSL + L R+ +P
Sbjct: 49 RETEIYNTVLLRHDNILGFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEP---H 105
Query: 191 VRMKVAIGAAKGLTFLH------DAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPT 244
+ +++A+ AA GL LH + + +RDFK+ N+L+ + ++D GLA
Sbjct: 106 LALRLAVSAACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQ 165
Query: 245 G-DRTHVSTQ-VMGTHGYAAPEYVATGRLTTK-------SDVYSFGVVLLEL 287
G D + +GT Y APE V ++ T +D+++FG+VL E+
Sbjct: 166 GSDYLDIGNNPRVGTKRYMAPE-VLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 133/304 (43%), Gaps = 43/304 (14%)
Query: 89 LLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHP 148
++G G FG VY+ + SG +VA+KK+ Q + E+ + +L H
Sbjct: 65 VIGNGSFGVVYQAKLCD---------SGELVAIKKV----LQDKRFKNRELQIMRKLDHC 111
Query: 149 NLVKL-IGYCLEGENRLLVY-----EFMPKG--SLENHLFRRGPQPLSWAVRMKVAIGAA 200
N+V+L + GE + VY +++P+ + H + R Q L
Sbjct: 112 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQLF 170
Query: 201 KGLTFLHDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHG 259
+ L ++H + +RD K N+LLD + KL DFG AK G+ + + +
Sbjct: 171 RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICSRY 225
Query: 260 YAAPEYV-ATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRK 318
Y APE + T+ DV+S G VL ELL G+ + G++Q LV+ K + R+
Sbjct: 226 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQ-LVEIIKVLGTPTRE 283
Query: 319 LFRIMDTKLGG-QYPQKAAHTAATLALQCLNNEPKLRPRM-SEVLAILERLEAPKNSAKL 376
R M+ ++PQ AH + RPR E +A+ RL +A+L
Sbjct: 284 QIREMNPNYTEFKFPQIKAHPWTKV----------FRPRTPPEAIALCSRLLEYTPTARL 333
Query: 377 SQSE 380
+ E
Sbjct: 334 TPLE 337
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 106/223 (47%), Gaps = 26/223 (11%)
Query: 77 LKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPE-GFQGHK-E 134
L A + + + +GEG +G V+K K G G VA+K+++ + G +G
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKA-------RDLKNG-GRFVALKRVRVQTGEEGMPLS 57
Query: 135 WLTEVNYLGQLH---HPNLVKLIGYCL----EGENRL-LVYEFMPKGSLENHLFRRGPQP 186
+ EV L L HPN+V+L C + E +L LV+E + + L +L + P+P
Sbjct: 58 TIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYL-DKVPEP 115
Query: 187 LSWAVRMK-VAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 245
+K + +GL FLH +V++RD K NIL+ + KL+DFGLA+
Sbjct: 116 GVPTETIKDMMFQLLRGLDFLH--SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSF- 172
Query: 246 DRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELL 288
T V+ T Y APE + T D++S G + E+
Sbjct: 173 --QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 133/304 (43%), Gaps = 43/304 (14%)
Query: 89 LLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHP 148
++G G FG VY+ + SG +VA+KK+ Q + E+ + +L H
Sbjct: 106 VIGNGSFGVVYQAKLCD---------SGELVAIKKV----LQDKRFKNRELQIMRKLDHC 152
Query: 149 NLVKL-IGYCLEGENRLLVY-----EFMPKG--SLENHLFRRGPQPLSWAVRMKVAIGAA 200
N+V+L + GE + VY +++P+ + H + R Q L
Sbjct: 153 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQLF 211
Query: 201 KGLTFLHDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHG 259
+ L ++H + +RD K N+LLD + KL DFG AK G+ + + +
Sbjct: 212 RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICSRY 266
Query: 260 YAAPEYV-ATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRK 318
Y APE + T+ DV+S G VL ELL G+ + G++Q LV+ K + R+
Sbjct: 267 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQ-LVEIIKVLGTPTRE 324
Query: 319 LFRIMDTKLGG-QYPQKAAHTAATLALQCLNNEPKLRPRM-SEVLAILERLEAPKNSAKL 376
R M+ ++PQ AH + RPR E +A+ RL +A+L
Sbjct: 325 QIREMNPNYTEFKFPQIKAHPWTKV----------FRPRTPPEAIALCSRLLEYTPTARL 374
Query: 377 SQSE 380
+ E
Sbjct: 375 TPLE 378
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 133/304 (43%), Gaps = 43/304 (14%)
Query: 89 LLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHP 148
++G G FG VY+ + SG +VA+KK+ Q + E+ + +L H
Sbjct: 55 VIGNGSFGVVYQAKLCD---------SGELVAIKKV----LQDKRFKNRELQIMRKLDHC 101
Query: 149 NLVKL-IGYCLEGENRLLVY-----EFMPKG--SLENHLFRRGPQPLSWAVRMKVAIGAA 200
N+V+L + GE + VY +++P+ + H + R Q L
Sbjct: 102 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQLF 160
Query: 201 KGLTFLHDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHG 259
+ L ++H + +RD K N+LLD + KL DFG AK G+ + + +
Sbjct: 161 RSLAYIH--SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICSRY 215
Query: 260 YAAPEYV-ATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRK 318
Y APE + T+ DV+S G VL ELL G+ + G++Q LV+ K + R+
Sbjct: 216 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQ-LVEIIKVLGTPTRE 273
Query: 319 LFRIMDTKLGG-QYPQKAAHTAATLALQCLNNEPKLRPRM-SEVLAILERLEAPKNSAKL 376
R M+ ++PQ AH + RPR E +A+ RL +A+L
Sbjct: 274 QIREMNPNYTEFKFPQIKAHPWTKV----------FRPRTPPEAIALCSRLLEYTPTARL 323
Query: 377 SQSE 380
+ E
Sbjct: 324 TPLE 327
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 133/304 (43%), Gaps = 43/304 (14%)
Query: 89 LLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHP 148
++G G FG VY+ + SG +VA+KK+ Q + E+ + +L H
Sbjct: 63 VIGNGSFGVVYQAKLCD---------SGELVAIKKV----LQDKRFKNRELQIMRKLDHC 109
Query: 149 NLVKL-IGYCLEGENRLLVY-----EFMPKG--SLENHLFRRGPQPLSWAVRMKVAIGAA 200
N+V+L + GE + VY +++P+ + H + R Q L
Sbjct: 110 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQLF 168
Query: 201 KGLTFLHDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHG 259
+ L ++H + +RD K N+LLD + KL DFG AK G+ + + +
Sbjct: 169 RSLAYIH--SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICSRY 223
Query: 260 YAAPEYV-ATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRK 318
Y APE + T+ DV+S G VL ELL G+ + G++Q LV+ K + R+
Sbjct: 224 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQ-LVEIIKVLGTPTRE 281
Query: 319 LFRIMDTKLGG-QYPQKAAHTAATLALQCLNNEPKLRPRM-SEVLAILERLEAPKNSAKL 376
R M+ ++PQ AH + RPR E +A+ RL +A+L
Sbjct: 282 QIREMNPNYTEFKFPQIKAHPWTKV----------FRPRTPPEAIALCSRLLEYTPTARL 331
Query: 377 SQSE 380
+ E
Sbjct: 332 TPLE 335
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 133/304 (43%), Gaps = 43/304 (14%)
Query: 89 LLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHP 148
++G G FG VY+ + SG +VA+KK+ Q + E+ + +L H
Sbjct: 61 VIGNGSFGVVYQAKLCD---------SGELVAIKKV----LQDKRFKNRELQIMRKLDHC 107
Query: 149 NLVKL-IGYCLEGENRLLVY-----EFMPKG--SLENHLFRRGPQPLSWAVRMKVAIGAA 200
N+V+L + GE + VY +++P+ + H + R Q L
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQLF 166
Query: 201 KGLTFLHDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHG 259
+ L ++H + +RD K N+LLD + KL DFG AK G+ + + +
Sbjct: 167 RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRY 221
Query: 260 YAAPEYV-ATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRK 318
Y APE + T+ DV+S G VL ELL G+ + G++Q LV+ K + R+
Sbjct: 222 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQ-LVEIIKVLGTPTRE 279
Query: 319 LFRIMDTKLGG-QYPQKAAHTAATLALQCLNNEPKLRPRM-SEVLAILERLEAPKNSAKL 376
R M+ ++PQ AH + RPR E +A+ RL +A+L
Sbjct: 280 QIREMNPNYTEFKFPQIKAHPWTKV----------FRPRTPPEAIALCSRLLEYTPTARL 329
Query: 377 SQSE 380
+ E
Sbjct: 330 TPLE 333
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 133/304 (43%), Gaps = 43/304 (14%)
Query: 89 LLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHP 148
++G G FG VY+ + SG +VA+KK+ Q + E+ + +L H
Sbjct: 61 VIGNGSFGVVYQAKLCD---------SGELVAIKKV----LQDKRFKNRELQIMRKLDHC 107
Query: 149 NLVKL-IGYCLEGENRLLVY-----EFMPKG--SLENHLFRRGPQPLSWAVRMKVAIGAA 200
N+V+L + GE + VY +++P+ + H + R Q L
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQLF 166
Query: 201 KGLTFLHDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHG 259
+ L ++H + +RD K N+LLD + KL DFG AK G+ + + +
Sbjct: 167 RSLAYIH--SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICSRY 221
Query: 260 YAAPEYV-ATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRK 318
Y APE + T+ DV+S G VL ELL G+ + G++Q LV+ K + R+
Sbjct: 222 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQ-LVEIIKVLGTPTRE 279
Query: 319 LFRIMDTKLGG-QYPQKAAHTAATLALQCLNNEPKLRPRM-SEVLAILERLEAPKNSAKL 376
R M+ ++PQ AH + RPR E +A+ RL +A+L
Sbjct: 280 QIREMNPNYTEFKFPQIKAHPWTKV----------FRPRTPPEAIALCSRLLEYTPTARL 329
Query: 377 SQSE 380
+ E
Sbjct: 330 TPLE 333
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 76/159 (47%), Gaps = 17/159 (10%)
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 191
L E L ++ P LVKL + N +V E++P G + +HL R G P +A
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
++ LTF + +IYRD K N+L+D + K++DFG AK RT
Sbjct: 149 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKR--VKGRT--- 195
Query: 252 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 132/304 (43%), Gaps = 43/304 (14%)
Query: 89 LLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHP 148
++G G FG VY+ + SG +VA+KK+ QG E+ + +L H
Sbjct: 27 VIGNGSFGVVYQAKLCD---------SGELVAIKKV----LQGKAFKNRELQIMRKLDHC 73
Query: 149 NLVKL-IGYCLEGENRLLVY-----EFMPKG--SLENHLFRRGPQPLSWAVRMKVAIGAA 200
N+V+L + GE + VY +++P+ + H + R Q L
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQLF 132
Query: 201 KGLTFLHDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHG 259
+ L ++H + +RD K N+LLD + KL DFG AK G+ + + +
Sbjct: 133 RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICSRY 187
Query: 260 YAAPEYV-ATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRK 318
Y APE + T+ DV+S G VL ELL G+ + G++Q LV+ K + R+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQ-LVEIIKVLGTPTRE 245
Query: 319 LFRIMDTKLGG-QYPQKAAHTAATLALQCLNNEPKLRPRM-SEVLAILERLEAPKNSAKL 376
R M+ +PQ AH + RPR E +A+ RL +A+L
Sbjct: 246 QIREMNPNYTEFAFPQIKAHPWTKV----------FRPRTPPEAIALCSRLLEYTPTARL 295
Query: 377 SQSE 380
+ E
Sbjct: 296 TPLE 299
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 103/242 (42%), Gaps = 55/242 (22%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNY- 141
N + L+G G +G VYKG +D+ +P VAVK F + ++ E N
Sbjct: 14 NLKLLELIGRGRYGAVYKGSLDE------RP-----VAVKVF---SFANRQNFINEKNIY 59
Query: 142 -LGQLHHPNLVKLIGYCLEGENR---------LLVYEFMPKGSLENHLFRRGPQPLSWAV 191
+ + H N+ + I G+ R LLV E+ P GSL +L W
Sbjct: 60 RVPLMEHDNIARFIV----GDERVTADGRMEYLLVMEYYPNGSLXKYL---SLHTSDWVS 112
Query: 192 RMKVAIGAAKGLTFLHDA-------ESQVIYRDFKASNILLDAEFNAKLSDFGLA----- 239
++A +GL +LH + + +RD + N+L+ + +SDFGL+
Sbjct: 113 SCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTG 172
Query: 240 -KAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS--------DVYSFGVVLLELLSG 290
+ G+ + + +GT Y APE V G + + D+Y+ G++ E+
Sbjct: 173 NRLVRPGEEDNAAISEVGTIRYMAPE-VLEGAVNLRDXESALKQVDMYALGLIYWEIFM- 230
Query: 291 RC 292
RC
Sbjct: 231 RC 232
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 122/283 (43%), Gaps = 42/283 (14%)
Query: 89 LLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHP 148
+LG+G +G VY G LS + + +A+K++ + + E+ L H
Sbjct: 15 VLGKGTYGIVYAG----RDLS-----NQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHK 65
Query: 149 NLVKLIGYCLEGENRLLVYEFMPKGSLENHL------FRRGPQPLSWAVRMKVAIGAAKG 202
N+V+ +G E + E +P GSL L + Q + + + + +G
Sbjct: 66 NIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQIL-----EG 120
Query: 203 LTFLHDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 261
L +LHD +Q+++RD K N+L++ K+SDFG +K + GT Y
Sbjct: 121 LKYLHD--NQIVHRDIKGDNVLINTYSGVLKISDFGTSKR--LAGINPCTETFTGTLQYM 176
Query: 262 APEYVATG--RLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKL 319
APE + G +D++S G ++E+ +G+ + +P + +
Sbjct: 177 APEIIDKGPRGYGKAADIWSLGCTIIEMATGK-----------PPFYELGEP----QAAM 221
Query: 320 FRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLA 362
F++ K+ + P+ + A L+C +P R +++L
Sbjct: 222 FKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLV 264
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 133/304 (43%), Gaps = 43/304 (14%)
Query: 89 LLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHP 148
++G G FG VY+ + SG +VA+KK+ Q + E+ + +L H
Sbjct: 35 VIGNGSFGVVYQAKLCD---------SGELVAIKKV----LQDKRFKNRELQIMRKLDHC 81
Query: 149 NLVKL-IGYCLEGENRLLVY-----EFMPKG--SLENHLFRRGPQPLSWAVRMKVAIGAA 200
N+V+L + GE + VY +++P+ + H + R Q L
Sbjct: 82 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQLF 140
Query: 201 KGLTFLHDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHG 259
+ L ++H + +RD K N+LLD + KL DFG AK G+ + + +
Sbjct: 141 RSLAYIH--SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRY 195
Query: 260 YAAPEYV-ATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRK 318
Y APE + T+ DV+S G VL ELL G+ + G++Q LV+ K + R+
Sbjct: 196 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQ-LVEIIKVLGTPTRE 253
Query: 319 LFRIMDTKLGG-QYPQKAAHTAATLALQCLNNEPKLRPRM-SEVLAILERLEAPKNSAKL 376
R M+ ++PQ AH + RPR E +A+ RL +A+L
Sbjct: 254 QIREMNPNYTEFKFPQIKAHPWTKV----------FRPRTPPEAIALCSRLLEYTPTARL 303
Query: 377 SQSE 380
+ E
Sbjct: 304 TPLE 307
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 133/304 (43%), Gaps = 43/304 (14%)
Query: 89 LLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHP 148
++G G FG VY+ + SG +VA+KK+ Q + E+ + +L H
Sbjct: 46 VIGNGSFGVVYQAKLCD---------SGELVAIKKV----LQDKRFKNRELQIMRKLDHC 92
Query: 149 NLVKL-IGYCLEGENRLLVY-----EFMPKG--SLENHLFRRGPQPLSWAVRMKVAIGAA 200
N+V+L + GE + VY +++P+ + H + R Q L
Sbjct: 93 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQLF 151
Query: 201 KGLTFLHDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHG 259
+ L ++H + +RD K N+LLD + KL DFG AK G+ + + +
Sbjct: 152 RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRY 206
Query: 260 YAAPEYV-ATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRK 318
Y APE + T+ DV+S G VL ELL G+ + G++Q LV+ K + R+
Sbjct: 207 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQ-LVEIIKVLGTPTRE 264
Query: 319 LFRIMDTKLGG-QYPQKAAHTAATLALQCLNNEPKLRPRM-SEVLAILERLEAPKNSAKL 376
R M+ ++PQ AH + RPR E +A+ RL +A+L
Sbjct: 265 QIREMNPNYTEFKFPQIKAHPWTKV----------FRPRTPPEAIALCSRLLEYTPTARL 314
Query: 377 SQSE 380
+ E
Sbjct: 315 TPLE 318
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 133/304 (43%), Gaps = 43/304 (14%)
Query: 89 LLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHP 148
++G G FG VY+ + SG +VA+KK+ Q + E+ + +L H
Sbjct: 39 VIGNGSFGVVYQAKLCD---------SGELVAIKKV----LQDKRFKNRELQIMRKLDHC 85
Query: 149 NLVKL-IGYCLEGENRLLVY-----EFMPKG--SLENHLFRRGPQPLSWAVRMKVAIGAA 200
N+V+L + GE + VY +++P+ + H + R Q L
Sbjct: 86 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQLF 144
Query: 201 KGLTFLHDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHG 259
+ L ++H + +RD K N+LLD + KL DFG AK G+ + + +
Sbjct: 145 RSLAYIH--SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRY 199
Query: 260 YAAPEYV-ATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRK 318
Y APE + T+ DV+S G VL ELL G+ + G++Q LV+ K + R+
Sbjct: 200 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQ-LVEIIKVLGTPTRE 257
Query: 319 LFRIMDTKLGG-QYPQKAAHTAATLALQCLNNEPKLRPRM-SEVLAILERLEAPKNSAKL 376
R M+ ++PQ AH + RPR E +A+ RL +A+L
Sbjct: 258 QIREMNPNYTEFKFPQIKAHPWTKV----------FRPRTPPEAIALCSRLLEYTPTARL 307
Query: 377 SQSE 380
+ E
Sbjct: 308 TPLE 311
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 76/159 (47%), Gaps = 17/159 (10%)
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 191
L E L ++ P LVKL + N +V E+ P G + +HL R G P +A
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
++ LTF + +IYRD K N+++D + K++DFGLAK RT
Sbjct: 149 QIV--------LTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKR--VKGRT--- 195
Query: 252 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 133/304 (43%), Gaps = 43/304 (14%)
Query: 89 LLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHP 148
++G G FG VY+ + SG +VA+KK+ Q + E+ + +L H
Sbjct: 27 VIGNGSFGVVYQAKLCD---------SGELVAIKKV----LQDKRFKNRELQIMRKLDHC 73
Query: 149 NLVKL-IGYCLEGENRLLVY-----EFMPKG--SLENHLFRRGPQPLSWAVRMKVAIGAA 200
N+V+L + GE + VY +++P+ + H + R Q L
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQLF 132
Query: 201 KGLTFLHDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHG 259
+ L ++H + +RD K N+LLD + KL DFG AK G+ + + +
Sbjct: 133 RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICSRY 187
Query: 260 YAAPEYV-ATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRK 318
Y APE + T+ DV+S G VL ELL G+ + G++Q LV+ K + R+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQ-LVEIIKVLGTPTRE 245
Query: 319 LFRIMDTKLGG-QYPQKAAHTAATLALQCLNNEPKLRPRM-SEVLAILERLEAPKNSAKL 376
R M+ ++PQ AH + RPR E +A+ RL +A+L
Sbjct: 246 QIREMNPNYTEFKFPQIKAHPWTKV----------FRPRTPPEAIALCSRLLEYTPTARL 295
Query: 377 SQSE 380
+ E
Sbjct: 296 TPLE 299
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 133/304 (43%), Gaps = 43/304 (14%)
Query: 89 LLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHP 148
++G G FG VY+ + SG +VA+KK+ Q + E+ + +L H
Sbjct: 40 VIGNGSFGVVYQAKLCD---------SGELVAIKKV----LQDKRFKNRELQIMRKLDHC 86
Query: 149 NLVKL-IGYCLEGENRLLVY-----EFMPKG--SLENHLFRRGPQPLSWAVRMKVAIGAA 200
N+V+L + GE + VY +++P+ + H + R Q L
Sbjct: 87 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQLF 145
Query: 201 KGLTFLHDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHG 259
+ L ++H + +RD K N+LLD + KL DFG AK G+ + + +
Sbjct: 146 RSLAYIH--SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICSRY 200
Query: 260 YAAPEYV-ATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRK 318
Y APE + T+ DV+S G VL ELL G+ + G++Q LV+ K + R+
Sbjct: 201 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQ-LVEIIKVLGTPTRE 258
Query: 319 LFRIMDTKLGG-QYPQKAAHTAATLALQCLNNEPKLRPRM-SEVLAILERLEAPKNSAKL 376
R M+ ++PQ AH + RPR E +A+ RL +A+L
Sbjct: 259 QIREMNPNYTEFKFPQIKAHPWTKV----------FRPRTPPEAIALCSRLLEYTPTARL 308
Query: 377 SQSE 380
+ E
Sbjct: 309 TPLE 312
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 133/304 (43%), Gaps = 43/304 (14%)
Query: 89 LLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHP 148
++G G FG VY+ + SG +VA+KK+ Q + E+ + +L H
Sbjct: 32 VIGNGSFGVVYQAKLCD---------SGELVAIKKV----LQDKRFKNRELQIMRKLDHC 78
Query: 149 NLVKL-IGYCLEGENRLLVY-----EFMPKG--SLENHLFRRGPQPLSWAVRMKVAIGAA 200
N+V+L + GE + VY +++P+ + H + R Q L
Sbjct: 79 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQLF 137
Query: 201 KGLTFLHDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHG 259
+ L ++H + +RD K N+LLD + KL DFG AK G+ + + +
Sbjct: 138 RSLAYIH--SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICSRY 192
Query: 260 YAAPEYV-ATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRK 318
Y APE + T+ DV+S G VL ELL G+ + G++Q LV+ K + R+
Sbjct: 193 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQ-LVEIIKVLGTPTRE 250
Query: 319 LFRIMDTKLGG-QYPQKAAHTAATLALQCLNNEPKLRPRM-SEVLAILERLEAPKNSAKL 376
R M+ ++PQ AH + RPR E +A+ RL +A+L
Sbjct: 251 QIREMNPNYTEFKFPQIKAHPWTKV----------FRPRTPPEAIALCSRLLEYTPTARL 300
Query: 377 SQSE 380
+ E
Sbjct: 301 TPLE 304
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 133/304 (43%), Gaps = 43/304 (14%)
Query: 89 LLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHP 148
++G G FG VY+ + SG +VA+KK+ Q + E+ + +L H
Sbjct: 27 VIGNGSFGVVYQAKLCD---------SGELVAIKKV----LQDKRFKNRELQIMRKLDHC 73
Query: 149 NLVKL-IGYCLEGENRLLVY-----EFMPKG--SLENHLFRRGPQPLSWAVRMKVAIGAA 200
N+V+L + GE + VY +++P+ + H + R Q L
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQLF 132
Query: 201 KGLTFLHDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHG 259
+ L ++H + +RD K N+LLD + KL DFG AK G+ + + +
Sbjct: 133 RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRY 187
Query: 260 YAAPEYV-ATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRK 318
Y APE + T+ DV+S G VL ELL G+ + G++Q LV+ K + R+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQ-LVEIIKVLGTPTRE 245
Query: 319 LFRIMDTKLGG-QYPQKAAHTAATLALQCLNNEPKLRPRM-SEVLAILERLEAPKNSAKL 376
R M+ ++PQ AH + RPR E +A+ RL +A+L
Sbjct: 246 QIREMNPNYTEFKFPQIKAHPWTKV----------FRPRTPPEAIALCSRLLEYTPTARL 295
Query: 377 SQSE 380
+ E
Sbjct: 296 TPLE 299
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 133/304 (43%), Gaps = 43/304 (14%)
Query: 89 LLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHP 148
++G G FG VY+ + SG +VA+KK+ Q + E+ + +L H
Sbjct: 28 VIGNGSFGVVYQAKLCD---------SGELVAIKKV----LQDKRFKNRELQIMRKLDHC 74
Query: 149 NLVKL-IGYCLEGENRLLVY-----EFMPKG--SLENHLFRRGPQPLSWAVRMKVAIGAA 200
N+V+L + GE + VY +++P+ + H + R Q L
Sbjct: 75 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQLF 133
Query: 201 KGLTFLHDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHG 259
+ L ++H + +RD K N+LLD + KL DFG AK G+ + + +
Sbjct: 134 RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRY 188
Query: 260 YAAPEYV-ATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRK 318
Y APE + T+ DV+S G VL ELL G+ + G++Q LV+ K + R+
Sbjct: 189 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQ-LVEIIKVLGTPTRE 246
Query: 319 LFRIMDTKLGG-QYPQKAAHTAATLALQCLNNEPKLRPRM-SEVLAILERLEAPKNSAKL 376
R M+ ++PQ AH + RPR E +A+ RL +A+L
Sbjct: 247 QIREMNPNYTEFKFPQIKAHPWTKV----------FRPRTPPEAIALCSRLLEYTPTARL 296
Query: 377 SQSE 380
+ E
Sbjct: 297 TPLE 300
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 133/304 (43%), Gaps = 43/304 (14%)
Query: 89 LLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHP 148
++G G FG VY+ + SG +VA+KK+ Q + E+ + +L H
Sbjct: 27 VIGNGSFGVVYQAKLCD---------SGELVAIKKV----LQDKRFKNRELQIMRKLDHC 73
Query: 149 NLVKL-IGYCLEGENRLLVY-----EFMPKG--SLENHLFRRGPQPLSWAVRMKVAIGAA 200
N+V+L + GE + VY +++P+ + H + R Q L
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQLF 132
Query: 201 KGLTFLHDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHG 259
+ L ++H + +RD K N+LLD + KL DFG AK G+ + + +
Sbjct: 133 RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRY 187
Query: 260 YAAPEYV-ATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRK 318
Y APE + T+ DV+S G VL ELL G+ + G++Q LV+ K + R+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQ-LVEIIKVLGTPTRE 245
Query: 319 LFRIMDTKLGG-QYPQKAAHTAATLALQCLNNEPKLRPRM-SEVLAILERLEAPKNSAKL 376
R M+ ++PQ AH + RPR E +A+ RL +A+L
Sbjct: 246 QIREMNPNYTEFKFPQIKAHPWTKV----------FRPRTPPEAIALCSRLLEYTPTARL 295
Query: 377 SQSE 380
+ E
Sbjct: 296 TPLE 299
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 133/304 (43%), Gaps = 43/304 (14%)
Query: 89 LLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHP 148
++G G FG VY+ + SG +VA+KK+ Q + E+ + +L H
Sbjct: 39 VIGNGSFGVVYQAKLCD---------SGELVAIKKV----LQDKRFKNRELQIMRKLDHC 85
Query: 149 NLVKL-IGYCLEGENRLLVY-----EFMPKG--SLENHLFRRGPQPLSWAVRMKVAIGAA 200
N+V+L + GE + VY +++P+ + H + R Q L
Sbjct: 86 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQLF 144
Query: 201 KGLTFLHDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHG 259
+ L ++H + +RD K N+LLD + KL DFG AK G+ + + +
Sbjct: 145 RSLAYIH--SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRY 199
Query: 260 YAAPEYV-ATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRK 318
Y APE + T+ DV+S G VL ELL G+ + G++Q LV+ K + R+
Sbjct: 200 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQ-LVEIIKVLGTPTRE 257
Query: 319 LFRIMDTKLGG-QYPQKAAHTAATLALQCLNNEPKLRPRM-SEVLAILERLEAPKNSAKL 376
R M+ ++PQ AH + RPR E +A+ RL +A+L
Sbjct: 258 QIREMNPNYTEFKFPQIKAHPWTKV----------FRPRTPPEAIALCSRLLEYTPTARL 307
Query: 377 SQSE 380
+ E
Sbjct: 308 TPLE 311
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 133/304 (43%), Gaps = 43/304 (14%)
Query: 89 LLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHP 148
++G G FG VY+ + SG +VA+KK+ Q + E+ + +L H
Sbjct: 31 VIGNGSFGVVYQAKLCD---------SGELVAIKKV----LQDKRFKNRELQIMRKLDHC 77
Query: 149 NLVKL-IGYCLEGENRLLVY-----EFMPKG--SLENHLFRRGPQPLSWAVRMKVAIGAA 200
N+V+L + GE + VY +++P+ + H + R Q L
Sbjct: 78 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQLF 136
Query: 201 KGLTFLHDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHG 259
+ L ++H + +RD K N+LLD + KL DFG AK G+ + + +
Sbjct: 137 RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRY 191
Query: 260 YAAPEYV-ATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRK 318
Y APE + T+ DV+S G VL ELL G+ + G++Q LV+ K + R+
Sbjct: 192 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQ-LVEIIKVLGTPTRE 249
Query: 319 LFRIMDTKLGG-QYPQKAAHTAATLALQCLNNEPKLRPRM-SEVLAILERLEAPKNSAKL 376
R M+ ++PQ AH + RPR E +A+ RL +A+L
Sbjct: 250 QIREMNPNYTEFKFPQIKAHPWTKV----------FRPRTPPEAIALCSRLLEYTPTARL 299
Query: 377 SQSE 380
+ E
Sbjct: 300 TPLE 303
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 131/304 (43%), Gaps = 43/304 (14%)
Query: 89 LLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHP 148
++G G FG VY+ + SG +VA+KK+ QG E+ + +L H
Sbjct: 27 VIGNGSFGVVYQAKLCD---------SGELVAIKKV----LQGKAFKNRELQIMRKLDHC 73
Query: 149 NLVKL-IGYCLEGENRLLVY-----EFMPKG--SLENHLFRRGPQPLSWAVRMKVAIGAA 200
N+V+L + GE + VY +++P + H + R Q L
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARH-YSRAKQTLPVIYVKLYMYQLF 132
Query: 201 KGLTFLHDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHG 259
+ L ++H + +RD K N+LLD + KL DFG AK G+ + + +
Sbjct: 133 RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRY 187
Query: 260 YAAPEYV-ATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRK 318
Y APE + T+ DV+S G VL ELL G+ + G++Q LV+ K + R+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQ-LVEIIKVLGTPTRE 245
Query: 319 LFRIMDTKLGG-QYPQKAAHTAATLALQCLNNEPKLRPRM-SEVLAILERLEAPKNSAKL 376
R M+ +PQ AH + RPR E +A+ RL +A+L
Sbjct: 246 QIREMNPNYTEFAFPQIKAHPWTKV----------FRPRTPPEAIALCSRLLEYTPTARL 295
Query: 377 SQSE 380
+ E
Sbjct: 296 TPLE 299
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 101/220 (45%), Gaps = 29/220 (13%)
Query: 84 FRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLG 143
F+ + + G+G FG V G + +GM VA+KK+ + ++E L + L
Sbjct: 25 FQVERMAGQGTFGTVQLG---------KEKSTGMSVAIKKVIQDPRFRNRE-LQIMQDLA 74
Query: 144 QLHHPNLVKL--IGYCLEGENRLLVY-----EFMPKG---SLENHLFRR-GPQPLSWAVR 192
LHHPN+V+L Y L +R +Y E++P N+ R+ P P+ V
Sbjct: 75 VLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVF 134
Query: 193 MKVAIGAAKGLTFLHDAESQVIYRDFKASNILL-DAEFNAKLSDFGLAKAGPTGDRTHVS 251
+ I + + LH V +RD K N+L+ +A+ KL DFG AK + +
Sbjct: 135 LFQLI---RSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEP---N 188
Query: 252 TQVMGTHGYAAPEYV-ATGRLTTKSDVYSFGVVLLELLSG 290
+ + Y APE + TT D++S G + E++ G
Sbjct: 189 VAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLG 228
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 17/159 (10%)
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 191
L E L ++ P LVKL + N +V E++P G + +HL R G P +A
Sbjct: 110 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 169
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
++ LTF + +IYRD K N+L+D + +++DFG AK RT
Sbjct: 170 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT--- 216
Query: 252 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 217 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 17/159 (10%)
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 191
L E L ++ P LVKL + N +V E++P G + +HL R G P +A
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
++ LTF + +IYRD K N+L+D + +++DFG AK RT
Sbjct: 150 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWT- 198
Query: 252 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 199 --LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 17/159 (10%)
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 191
L E L ++ P LVKL + N +V E++P G + +HL R G P +A
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
++ LTF + +IYRD K N+L+D + +++DFG AK RT
Sbjct: 150 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT--- 196
Query: 252 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 197 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 17/159 (10%)
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 191
L E L ++ P LVKL + N +V E++P G + +HL R G P +A
Sbjct: 89 LNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
++ LTF + +IYRD K N+L+D + +++DFG AK RT
Sbjct: 149 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT--- 195
Query: 252 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 17/159 (10%)
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 191
L E L ++ P LVKL + N +V E++P G + +HL R G P +A
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
++ LTF + +IYRD K N+L+D + +++DFG AK RT
Sbjct: 150 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT--- 196
Query: 252 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 197 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 17/159 (10%)
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 191
L E L ++ P LVKL + N +V E++P G + +HL R G P +A
Sbjct: 89 LNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
++ LTF + +IYRD K N+L+D + +++DFG AK RT
Sbjct: 149 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT--- 195
Query: 252 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 17/159 (10%)
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 191
L E L ++ P LVKL + N +V E++P G + +HL R G P +A
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
++ LTF + +IYRD K N+L+D + +++DFG AK RT
Sbjct: 149 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT--- 195
Query: 252 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 17/159 (10%)
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 191
L E L ++ P LVKL + N +V E++P G + +HL R G P +A
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
++ LTF + +IYRD K N+L+D + +++DFG AK RT
Sbjct: 149 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT--- 195
Query: 252 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 17/159 (10%)
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 191
L E L ++ P LVKL + N +V E++P G + +HL R G P +A
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
++ LTF + +IYRD K N+L+D + +++DFG AK RT
Sbjct: 150 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT--- 196
Query: 252 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 197 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 17/159 (10%)
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 191
L E L ++ P LVKL + N +V E++P G + +HL R G P +A
Sbjct: 89 LNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
++ LTF + +IYRD K N+L+D + +++DFG AK RT
Sbjct: 149 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT--- 195
Query: 252 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 17/159 (10%)
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 191
L E L ++ P LVKL + N +V E++P G + +HL R G P +A
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAA 148
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
++ LTF + +IYRD K N+L+D + +++DFG AK RT
Sbjct: 149 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT--- 195
Query: 252 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 17/159 (10%)
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 191
L E L ++ P LVKL + N +V E++P G + +HL R G P +A
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
++ LTF + +IYRD K N+L+D + +++DFG AK RT
Sbjct: 149 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT--- 195
Query: 252 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 17/159 (10%)
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 191
L E L ++ P LVKL + N +V E++P G + +HL R G P +A
Sbjct: 82 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAA 141
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
++ LTF + +IYRD K N+L+D + +++DFG AK RT
Sbjct: 142 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT--- 188
Query: 252 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 189 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 17/159 (10%)
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 191
L E L ++ P LVKL + N +V E++P G + +HL R G P +A
Sbjct: 82 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 141
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
++ LTF + +IYRD K N+L+D + +++DFG AK RT
Sbjct: 142 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT--- 188
Query: 252 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 189 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 99/210 (47%), Gaps = 14/210 (6%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLT-EVNY 141
+F+ +LGEG F V + L+ ++ + ++ + + E ++T E +
Sbjct: 38 DFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKEN---KVPYVTRERDV 90
Query: 142 LGQLHHPNLVKLIGYCLEGENRLLV-YEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAA 200
+ +L HP VKL +C + + +L + G L ++ + G + I +A
Sbjct: 91 MSRLDHPFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA 149
Query: 201 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 260
L +LH +I+RD K NILL+ + + +++DFG AK + + +GT Y
Sbjct: 150 --LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 205
Query: 261 AAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+PE + SD+++ G ++ +L++G
Sbjct: 206 VSPELLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 17/159 (10%)
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 191
L E L ++ P LVKL + N +V E++P G + +HL R G P +A
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAA 148
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
++ LTF + +IYRD K N+L+D + +++DFG AK RT
Sbjct: 149 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT--- 195
Query: 252 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 17/159 (10%)
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 191
L E L ++ P LVKL + N +V E++P G + +HL R G P +A
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
++ LTF + +IYRD K N+L+D + +++DFG AK RT
Sbjct: 150 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT--- 196
Query: 252 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 197 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 17/159 (10%)
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 191
L E L ++ P LVKL + N +V E++P G + +HL R G P +A
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAA 149
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
++ LTF + +IYRD K N+L+D + +++DFG AK RT
Sbjct: 150 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT--- 196
Query: 252 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 197 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 75/159 (47%), Gaps = 17/159 (10%)
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 191
L E L ++ P LVKL + N +V E+ P G + +HL R G P +A
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
++ LTF + +IYRD K N+++D + K++DFG AK RT
Sbjct: 150 QIV--------LTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKR--VKGRT--- 196
Query: 252 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 197 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 75/159 (47%), Gaps = 17/159 (10%)
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 191
L E L ++ P LVKL + N +V E+ P G + +HL R G P +A
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAA 148
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
++ LTF + +IYRD K N+++D + K++DFG AK RT
Sbjct: 149 QIV--------LTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKR--VKGRT--- 195
Query: 252 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 75/159 (47%), Gaps = 17/159 (10%)
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 191
L E L ++ P LVKL + N +V E+ P G + +HL R G P +A
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
++ LTF + +IYRD K N+++D + K++DFG AK RT
Sbjct: 149 QIV--------LTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKR--VKGRT--- 195
Query: 252 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 17/159 (10%)
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 191
L E L ++ P LVKL + N +V E++P G + +HL R G P +A
Sbjct: 75 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 134
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
++ LTF + +IYRD K N+L+D + +++DFG AK RT
Sbjct: 135 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWT- 183
Query: 252 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 184 --LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 220
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 116/287 (40%), Gaps = 37/287 (12%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPE-GFQGHKEWLTEVNY 141
+ P LG G +G V K +H SG ++AVK+++ Q K L +++
Sbjct: 52 DLEPIMELGRGAYGVVEKM---RHV------PSGQIMAVKRIRATVNSQEQKRLLMDLDI 102
Query: 142 -LGQLHHPNLVKLIGYCLEGENRLLVYEFMPKG--SLENHLFRRGPQPLSWAVRMKVAIG 198
+ + P V G + + E M + +G Q + + K+A+
Sbjct: 103 SMRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKG-QTIPEDILGKIAVS 161
Query: 199 AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH 258
K L LH S VI+RD K SN+L++A K+ DFG+ +G D T G
Sbjct: 162 IVKALEHLHSKLS-VIHRDVKPSNVLINALGQVKMCDFGI--SGYLVDSV-AKTIDAGCK 217
Query: 259 GYAAPEYV----ATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 314
Y APE + + KSD++S G+ ++EL R D W P+
Sbjct: 218 PYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDS-----------WGTPF-- 264
Query: 315 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 361
++L ++++ K + QCL K RP E++
Sbjct: 265 --QQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELM 309
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 17/159 (10%)
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 191
L E L ++ P LVKL + N +V E+ P G + +HL R G P +A
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
++ LTF + +IYRD K N+++D + +++DFGLAK RT
Sbjct: 149 QIV--------LTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKR--VKGRT--- 195
Query: 252 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 94/215 (43%), Gaps = 28/215 (13%)
Query: 84 FRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWL-TEVNYL 142
F LG G F V + + +G + AVK + + +G + + E+ L
Sbjct: 24 FEFKETLGTGAFSEV---------VLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVL 74
Query: 143 GQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRG---PQPLSWAVRMKVAIG 198
++ H N+V L E N L LV + + G L + + +G + S +R +
Sbjct: 75 RKIKHENIVALED-IYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVL--- 130
Query: 199 AAKGLTFLHDAESQVIYRDFKASNILL---DAEFNAKLSDFGLAKAGPTGDRTHVSTQVM 255
+ +LH +++RD K N+L D E +SDFGL+K GD V +
Sbjct: 131 --DAVYYLH--RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGD---VMSTAC 183
Query: 256 GTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
GT GY APE +A + D +S GV+ LL G
Sbjct: 184 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 218
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 95/225 (42%), Gaps = 35/225 (15%)
Query: 84 FRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLG 143
R +L EGGF FVY+ GSG A+K+L + ++ + EV ++
Sbjct: 30 LRVRRVLAEGGFAFVYEA---------QDVGSGREYALKRLLSNEEEKNRAIIQEVCFMK 80
Query: 144 QLH-HPNLVKLIGYCL-------EGENRLLVYEFMPKGSLENHLFR---RGPQPLSWAVR 192
+L HPN+V+ G+ L+ + KG L L + RGP LS
Sbjct: 81 KLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGP--LSCDTV 138
Query: 193 MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAK--------AGPT 244
+K+ + + +H + +I+RD K N+LL + KL DFG A +
Sbjct: 139 LKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSA 198
Query: 245 GDRTHVSTQVM--GTHGYAAPEYV---ATGRLTTKSDVYSFGVVL 284
R V ++ T Y PE + + + K D+++ G +L
Sbjct: 199 QRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCIL 243
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 21/210 (10%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPE-GFQGHKEWLTEVNYLGQLHH- 147
+G G +G V K KP SG ++AVK+++ + K+ L +++ + +
Sbjct: 30 IGRGAYGSVNK--------MVHKP-SGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDC 80
Query: 148 PNLVKLIGYCLEGENRLLVYEFMPKG--SLENHLFRRGPQPLSWAVRMKVAIGAAKGLTF 205
P +V+ G + + E M +++ + + K+ + K L
Sbjct: 81 PYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNH 140
Query: 206 LHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEY 265
L + ++I+RD K SNILLD N KL DFG+ +G D + T+ G Y APE
Sbjct: 141 LKE-NLKIIHRDIKPSNILLDRSGNIKLCDFGI--SGQLVD-SIAKTRDAGCRPYMAPER 196
Query: 266 V--ATGR--LTTKSDVYSFGVVLLELLSGR 291
+ + R +SDV+S G+ L EL +GR
Sbjct: 197 IDPSASRQGYDVRSDVWSLGITLYELATGR 226
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 91/203 (44%), Gaps = 17/203 (8%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
LG G FG V++ + +G V K + E++ + QLHHP
Sbjct: 59 LGSGAFGVVHRC---------VEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPK 109
Query: 150 LVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDA 209
L+ L + +L+ EF+ G L + + + +S A + A +GL +H
Sbjct: 110 LINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYK-MSEAEVINYMRQACEGLKHMH-- 166
Query: 210 ESQVIYRDFKASNILLDAE--FNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVA 267
E +++ D K NI+ + + + K+ DFGLA + V+T T +AAPE V
Sbjct: 167 EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTT---ATAEFAAPEIVD 223
Query: 268 TGRLTTKSDVYSFGVVLLELLSG 290
+ +D+++ GV+ LLSG
Sbjct: 224 REPVGFYTDMWAIGVLGYVLLSG 246
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 79/160 (49%), Gaps = 14/160 (8%)
Query: 137 TEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA 196
TE+ L +L+HP ++K+ + + E+ +V E M G L + + G + L A
Sbjct: 64 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVV--GNKRLKEATCKLYF 120
Query: 197 IGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN---AKLSDFGLAKAGPTGDRTHVSTQ 253
+ +LH E+ +I+RD K N+LL ++ K++DFG +K G+ + + T
Sbjct: 121 YQMLLAVQYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT- 175
Query: 254 VMGTHGYAAPEY---VATGRLTTKSDVYSFGVVLLELLSG 290
+ GT Y APE V T D +S GV+L LSG
Sbjct: 176 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 79/160 (49%), Gaps = 14/160 (8%)
Query: 137 TEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA 196
TE+ L +L+HP ++K+ + + E+ +V E M G L + + G + L A
Sbjct: 63 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVV--GNKRLKEATCKLYF 119
Query: 197 IGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN---AKLSDFGLAKAGPTGDRTHVSTQ 253
+ +LH E+ +I+RD K N+LL ++ K++DFG +K G+ + + T
Sbjct: 120 YQMLLAVQYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT- 174
Query: 254 VMGTHGYAAPEY---VATGRLTTKSDVYSFGVVLLELLSG 290
+ GT Y APE V T D +S GV+L LSG
Sbjct: 175 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 214
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 79/160 (49%), Gaps = 14/160 (8%)
Query: 137 TEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA 196
TE+ L +L+HP ++K+ + + E+ +V E M G L + + G + L A
Sbjct: 64 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVV--GNKRLKEATCKLYF 120
Query: 197 IGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN---AKLSDFGLAKAGPTGDRTHVSTQ 253
+ +LH E+ +I+RD K N+LL ++ K++DFG +K G+ + + T
Sbjct: 121 YQMLLAVQYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT- 175
Query: 254 VMGTHGYAAPEY---VATGRLTTKSDVYSFGVVLLELLSG 290
+ GT Y APE V T D +S GV+L LSG
Sbjct: 176 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 79/160 (49%), Gaps = 14/160 (8%)
Query: 137 TEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA 196
TE+ L +L+HP ++K+ + + E+ +V E M G L + + G + L A
Sbjct: 70 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVV--GNKRLKEATCKLYF 126
Query: 197 IGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN---AKLSDFGLAKAGPTGDRTHVSTQ 253
+ +LH E+ +I+RD K N+LL ++ K++DFG +K G+ + + T
Sbjct: 127 YQMLLAVQYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT- 181
Query: 254 VMGTHGYAAPEY---VATGRLTTKSDVYSFGVVLLELLSG 290
+ GT Y APE V T D +S GV+L LSG
Sbjct: 182 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 221
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 79/160 (49%), Gaps = 14/160 (8%)
Query: 137 TEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA 196
TE+ L +L+HP ++K+ + + E+ +V E M G L + + G + L A
Sbjct: 64 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVV--GNKRLKEATCKLYF 120
Query: 197 IGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN---AKLSDFGLAKAGPTGDRTHVSTQ 253
+ +LH E+ +I+RD K N+LL ++ K++DFG +K G+ + + T
Sbjct: 121 YQMLLAVQYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT- 175
Query: 254 VMGTHGYAAPEY---VATGRLTTKSDVYSFGVVLLELLSG 290
+ GT Y APE V T D +S GV+L LSG
Sbjct: 176 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 75/159 (47%), Gaps = 17/159 (10%)
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 191
L E L ++ P LVKL + N +V E+ P G + +HL R G P +A
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
++ LTF + +IYRD K N+++D + +++DFG AK RT
Sbjct: 149 QIV--------LTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAKR--VKGRT--- 195
Query: 252 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 91/196 (46%), Gaps = 19/196 (9%)
Query: 116 GMVVAVKKL-KPEGFQGH-KEWLTEVNYLGQLHHPNLVKLIGYCL------EGENRLLVY 167
G+ VAVKKL +P Q H K E+ L ++H N++ L+ E ++ LV
Sbjct: 49 GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 108
Query: 168 EFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDA 227
E M + + +S+ + + G+ LH A +I+RD K SNI++ +
Sbjct: 109 ELMDANLCQVIHMELDHERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKS 161
Query: 228 EFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLEL 287
+ K+ DFGLA+ T + T + T Y APE + D++S G ++ EL
Sbjct: 162 DCTLKILDFGLARTACTN---FMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGEL 218
Query: 288 LSGRCAVDKTKVGIEQ 303
+ G C + + I+Q
Sbjct: 219 VKG-CVIFQGTDHIDQ 233
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 123/302 (40%), Gaps = 74/302 (24%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL---KPEGFQGHKEWLT-- 137
+R LLG+GGFG V+ G H L+ + VA+K + + G+ + +T
Sbjct: 32 EYRLGPLLGKGGFGTVFAG----HRLT-----DRLQVAIKVIPRNRVLGWSPLSDSVTCP 82
Query: 138 -EVNYLGQL----HHPNLVKLIGYCLEGENRLLVYEF-MPKGSLENHLFRRGPQPLSWAV 191
EV L ++ HP +++L+ + E +LV E +P L +++ +GP
Sbjct: 83 LEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGP------- 135
Query: 192 RMKVAIGAAKGLTFL--------HDAESQVIYRDFKASNILLDAEFN-AKLSDFGLAKAG 242
+G F H V++RD K NIL+D AKL DFG
Sbjct: 136 -----LGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFG----- 185
Query: 243 PTGDRTHVS--TQVMGTHGYAAPEYVATGRL-TTKSDVYSFGVVLLELLSGRCAVDKTKV 299
+G H T GT Y+ PE+++ + + V+S G++L +++ G ++ +
Sbjct: 186 -SGALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE 244
Query: 300 GIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSE 359
+E L +P + L +CL +P RP + E
Sbjct: 245 ILEAEL------------------------HFPAHVSPDCCALIRRCLAPKPSSRPSLEE 280
Query: 360 VL 361
+L
Sbjct: 281 IL 282
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 116/284 (40%), Gaps = 26/284 (9%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
LG+G F ++KG + + V +K L + + + + +L H +
Sbjct: 16 LGQGTFTKIFKGV--RREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKH 73
Query: 150 LVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDA 209
LV G C+ G+ +LV EF+ GSL+ +L ++ ++ +++VA A + FL
Sbjct: 74 LVLNYGVCVCGDENILVQEFVKFGSLDTYL-KKNKNCINILWKLEVAKQLAAAMHFLE-- 130
Query: 210 ESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG--YAAPEYVA 267
E+ +I+ + A NILL E + K + K G V + + + PE +
Sbjct: 131 ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECIE 190
Query: 268 TGR-LTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTK 326
+ L +D +SFG L E+ SG D L +RKL D
Sbjct: 191 NPKNLNLATDKWSFGTTLWEICSGG---------------DKPLSALDSQRKLQFYEDRH 235
Query: 327 LGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEAP 370
Q P A A L C++ EP RP ++ L L P
Sbjct: 236 ---QLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTP 276
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 95/209 (45%), Gaps = 12/209 (5%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLT-EVNY 141
+F+ +LGEG F V + L+ ++ + ++ + + E ++T E +
Sbjct: 11 DFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKEN---KVPYVTRERDV 63
Query: 142 LGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAK 201
+ +L HP VKL + E + G L ++ + G + I +A
Sbjct: 64 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA- 122
Query: 202 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 261
L +LH +I+RD K NILL+ + + +++DFG AK + + +GT Y
Sbjct: 123 -LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 179
Query: 262 APEYVATGRLTTKSDVYSFGVVLLELLSG 290
+PE + SD+++ G ++ +L++G
Sbjct: 180 SPELLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 72/150 (48%), Gaps = 17/150 (11%)
Query: 145 LHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAVRMKVAIGAA 200
++ P LVKL + N +V E+ P G + +HL R G P +A ++
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIV------ 152
Query: 201 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 260
LTF + +IYRD K N+L+D + K++DFG AK RT + GT Y
Sbjct: 153 --LTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKR--VKGRT---WXLCGTPEY 205
Query: 261 AAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
APE + + D ++ GV++ E+ +G
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 76/160 (47%), Gaps = 19/160 (11%)
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 191
L E L ++ P LVKL + N +V E++ G + +HL R G P +A
Sbjct: 110 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 169
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
++ LTF + +IYRD K N+L+D + +++DFG AK R +
Sbjct: 170 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGA 215
Query: 252 TQVM-GTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
T + GT Y APE + + D ++ GV++ E+ +G
Sbjct: 216 TWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 79/160 (49%), Gaps = 14/160 (8%)
Query: 137 TEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA 196
TE+ L +L+HP ++K+ + + E+ +V E M G L + + G + L A
Sbjct: 189 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVV--GNKRLKEATCKLYF 245
Query: 197 IGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN---AKLSDFGLAKAGPTGDRTHVSTQ 253
+ +LH E+ +I+RD K N+LL ++ K++DFG +K G+ + + T
Sbjct: 246 YQMLLAVQYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT- 300
Query: 254 VMGTHGYAAPEY---VATGRLTTKSDVYSFGVVLLELLSG 290
+ GT Y APE V T D +S GV+L LSG
Sbjct: 301 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 340
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 95/209 (45%), Gaps = 12/209 (5%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLT-EVNY 141
+F+ +LGEG F V + L+ ++ + ++ + + E ++T E +
Sbjct: 10 DFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKEN---KVPYVTRERDV 62
Query: 142 LGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAK 201
+ +L HP VKL + E + G L ++ + G + I +A
Sbjct: 63 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA- 121
Query: 202 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 261
L +LH +I+RD K NILL+ + + +++DFG AK + + +GT Y
Sbjct: 122 -LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 178
Query: 262 APEYVATGRLTTKSDVYSFGVVLLELLSG 290
+PE + SD+++ G ++ +L++G
Sbjct: 179 SPELLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 74/159 (46%), Gaps = 17/159 (10%)
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 191
L E L ++ P L KL + N +V E+ P G + +HL R G P +A
Sbjct: 90 LNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
++ LTF + +IYRD K N+++D + K++DFG AK RT
Sbjct: 150 QIV--------LTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKR--VKGRT--- 196
Query: 252 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 197 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 79/160 (49%), Gaps = 14/160 (8%)
Query: 137 TEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA 196
TE+ L +L+HP ++K+ + + E+ +V E M G L + + G + L A
Sbjct: 203 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVV--GNKRLKEATCKLYF 259
Query: 197 IGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN---AKLSDFGLAKAGPTGDRTHVSTQ 253
+ +LH E+ +I+RD K N+LL ++ K++DFG +K G+ + + T
Sbjct: 260 YQMLLAVQYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT- 314
Query: 254 VMGTHGYAAPEY---VATGRLTTKSDVYSFGVVLLELLSG 290
+ GT Y APE V T D +S GV+L LSG
Sbjct: 315 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 354
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 74/159 (46%), Gaps = 17/159 (10%)
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 191
L E L ++ P L KL + N +V E+ P G + +HL R G P +A
Sbjct: 90 LNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
++ LTF + +IYRD K N+++D + K++DFG AK RT
Sbjct: 150 QIV--------LTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKR--VKGRT--- 196
Query: 252 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 197 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 74/159 (46%), Gaps = 17/159 (10%)
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 191
L E L ++ P L KL + N +V E+ P G + +HL R G P +A
Sbjct: 90 LNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAA 149
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
++ LTF + +IYRD K N+++D + K++DFG AK RT
Sbjct: 150 QIV--------LTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKR--VKGRT--- 196
Query: 252 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 197 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 95/209 (45%), Gaps = 12/209 (5%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLT-EVNY 141
+F+ +LGEG F V + L+ ++ + ++ + + E ++T E +
Sbjct: 9 DFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKEN---KVPYVTRERDV 61
Query: 142 LGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAK 201
+ +L HP VKL + E + G L ++ + G + I +A
Sbjct: 62 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA- 120
Query: 202 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 261
L +LH +I+RD K NILL+ + + +++DFG AK + + +GT Y
Sbjct: 121 -LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 177
Query: 262 APEYVATGRLTTKSDVYSFGVVLLELLSG 290
+PE + SD+++ G ++ +L++G
Sbjct: 178 SPELLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 96/209 (45%), Gaps = 12/209 (5%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLT-EVNY 141
+F+ +LGEG F V + L+ ++ + ++ + + E ++T E +
Sbjct: 33 DFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKEN---KVPYVTRERDV 85
Query: 142 LGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAK 201
+ +L HP VKL + E + G L ++ + G + I +A
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSA- 144
Query: 202 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 261
L +LH +I+RD K NILL+ + + +++DFG AK + + +GT Y
Sbjct: 145 -LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYV 201
Query: 262 APEYVATGRLTTKSDVYSFGVVLLELLSG 290
+PE + + SD+++ G ++ +L++G
Sbjct: 202 SPELLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 95/209 (45%), Gaps = 12/209 (5%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLT-EVNY 141
+F+ +LGEG F V + L+ ++ + ++ + + E ++T E +
Sbjct: 8 DFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKEN---KVPYVTRERDV 60
Query: 142 LGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAK 201
+ +L HP VKL + E + G L ++ + G + I +A
Sbjct: 61 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA- 119
Query: 202 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 261
L +LH +I+RD K NILL+ + + +++DFG AK + + +GT Y
Sbjct: 120 -LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 176
Query: 262 APEYVATGRLTTKSDVYSFGVVLLELLSG 290
+PE + SD+++ G ++ +L++G
Sbjct: 177 SPELLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 107/257 (41%), Gaps = 22/257 (8%)
Query: 114 GSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLE--GENRLLVYEFMP 171
G+ +VV V K++ + +++ E L HPN++ ++G C + L+ + P
Sbjct: 33 GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWXP 92
Query: 172 KGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNA 231
GSL N L + + +K A+ A+G FLH E + + ++ +D + A
Sbjct: 93 YGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAFLHTLEPLIPRHALNSRSVXIDEDXTA 152
Query: 232 KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 291
++S + + + R + V PE T R + +D +SF V+L EL++
Sbjct: 153 RISXADVKFSFQSPGRXYAPAWVAPEALQKKPE--DTNRRS--ADXWSFAVLLWELVTR- 207
Query: 292 CAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEP 351
E D + + K L + T G P + L C N +P
Sbjct: 208 ----------EVPFADLSNXEIGXKVALEGLRPTIPPGISPH-----VSKLXKICXNEDP 252
Query: 352 KLRPRMSEVLAILERLE 368
RP+ ++ ILE+ +
Sbjct: 253 AKRPKFDXIVPILEKXQ 269
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 124/289 (42%), Gaps = 44/289 (15%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KP-EGFQ 130
T E+ +N P +G G +G V + +G+ VAVKKL KP +
Sbjct: 28 TIWEVPERYQNLSP---VGSGAYGSVCAAF---------DTKTGLRVAVKKLSKPFQSII 75
Query: 131 GHKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFMPKGSLENHLFRRGPQ 185
K E+ L + H N++ L+ LE N + + + L N + Q
Sbjct: 76 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 132
Query: 186 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 245
L+ + +GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 133 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TD 188
Query: 246 DRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQS 304
D T + T Y APE + ++ D++S G ++ ELL+GR T
Sbjct: 189 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD------ 239
Query: 305 LVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 353
++ + + R++ T G + +K + +A +Q L PK+
Sbjct: 240 -------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQMPKM 280
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 108/246 (43%), Gaps = 38/246 (15%)
Query: 56 TPKSEGEILSSSNLKAFTFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGS 115
T +EG +L + LK + E + LG G FG V++ Q +
Sbjct: 48 TEDNEG-VLLTEKLKPVDY-EYREEVHWMTHQPRLGRGSFGEVHRMKDKQ---------T 96
Query: 116 GMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSL 175
G AVKK++ E F+ + E+ L P +V L G EG + E + GSL
Sbjct: 97 GFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSL 151
Query: 176 ENHLFRRGPQPLSWAVRMKVAIGAA-KGLTFLHDAESQVIYRDFKASNILLDAEFN-AKL 233
+ + G P R +G A +GL +LH ++++ D KA N+LL ++ + A L
Sbjct: 152 GQLIKQMGCLPED---RALYYLGQALEGLEYLHT--RRILHGDVKADNVLLSSDGSRAAL 206
Query: 234 SDFG---------LAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVL 284
DFG L K+ TGD + GT + APE V K D++S ++
Sbjct: 207 CDFGHALCLQPDGLGKSLLTGD------YIPGTETHMAPEVVMGKPCDAKVDIWSSCCMM 260
Query: 285 LELLSG 290
L +L+G
Sbjct: 261 LHMLNG 266
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 27/210 (12%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KP-EGFQGHKEWLTEVNYLGQLHH 147
+G G +G V S SG+ +AVKKL +P + K E+ L + H
Sbjct: 59 VGSGAYGSV---------CSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 109
Query: 148 PNLVKLI-----GYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKG 202
N++ L+ LE N + + + L N + Q L+ + +G
Sbjct: 110 ENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRG 166
Query: 203 LTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAA 262
L ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T D T + T Y A
Sbjct: 167 LKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWYRA 219
Query: 263 PEYVATG-RLTTKSDVYSFGVVLLELLSGR 291
PE + D++S G ++ ELL+GR
Sbjct: 220 PEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 117/293 (39%), Gaps = 37/293 (12%)
Query: 77 LKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPE-GFQGHKEW 135
++ + P LG G +G V K +H SG ++AVK+++ Q K
Sbjct: 2 MEVKADDLEPIMELGRGAYGVVEKM---RHV------PSGQIMAVKRIRATVNSQEQKRL 52
Query: 136 LTEVNY-LGQLHHPNLVKLIGYCLEGENRLLVYEFMPKG--SLENHLFRRGPQPLSWAVR 192
L +++ + + P V G + + E M + +G Q + +
Sbjct: 53 LMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKG-QTIPEDIL 111
Query: 193 MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVST 252
K+A+ K L LH S VI+RD K SN+L++A K+ DFG+ +G D
Sbjct: 112 GKIAVSIVKALEHLHSKLS-VIHRDVKPSNVLINALGQVKMCDFGI--SGYLVDDVAKDI 168
Query: 253 QVMGTHGYAAPEYV----ATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW 308
G Y APE + + KSD++S G+ ++EL R D W
Sbjct: 169 DA-GCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDS-----------W 216
Query: 309 AKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 361
P+ ++L ++++ K + QCL K RP E++
Sbjct: 217 GTPF----QQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELM 265
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 95/209 (45%), Gaps = 12/209 (5%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLT-EVNY 141
+F+ +LGEG F V + L+ ++ + ++ + + E ++T E +
Sbjct: 34 DFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKEN---KVPYVTRERDV 86
Query: 142 LGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAK 201
+ +L HP VKL + E + G L ++ + G + I +A
Sbjct: 87 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA- 145
Query: 202 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 261
L +LH +I+RD K NILL+ + + +++DFG AK + + +GT Y
Sbjct: 146 -LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYV 202
Query: 262 APEYVATGRLTTKSDVYSFGVVLLELLSG 290
+PE + SD+++ G ++ +L++G
Sbjct: 203 SPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 102/227 (44%), Gaps = 30/227 (13%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KP-EGFQ 130
T E+ +N P +G G +G V + +G+ VAVKKL +P +
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSII 63
Query: 131 GHKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFMPKGSLENHLFRRGPQ 185
K E+ L + H N++ L+ LE N + + + L N + Q
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 120
Query: 186 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 245
L+ + +GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TD 176
Query: 246 DRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 291
D T + T Y APE + ++ D++S G ++ ELL+GR
Sbjct: 177 DEM---TGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 124/289 (42%), Gaps = 44/289 (15%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KP-EGFQ 130
T E+ +N P +G G +G V + +G+ VAVKKL +P +
Sbjct: 21 TIWEVPERYQNLSP---IGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSII 68
Query: 131 GHKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFMPKGSLENHLFRRGPQ 185
K E+ L + H N++ L+ LE N + + + L N + Q
Sbjct: 69 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 125
Query: 186 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 245
L+ + +GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 126 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLARH--TD 181
Query: 246 DRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQS 304
D T + T Y APE + ++ D++S G ++ ELL+GR T
Sbjct: 182 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD------ 232
Query: 305 LVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 353
++ + + R++ T G + +K + +A +Q L PK+
Sbjct: 233 -------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQMPKM 273
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 115/284 (40%), Gaps = 26/284 (9%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
LG+G F ++KG + + V +K L + + + + +L H +
Sbjct: 16 LGQGTFTKIFKG--VRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKH 73
Query: 150 LVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDA 209
LV G C G+ +LV EF+ GSL+ +L ++ ++ +++VA A + FL
Sbjct: 74 LVLNYGVCFCGDENILVQEFVKFGSLDTYL-KKNKNCINILWKLEVAKQLAWAMHFLE-- 130
Query: 210 ESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG--YAAPEYVA 267
E+ +I+ + A NILL E + K + K G V + + + PE +
Sbjct: 131 ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECIE 190
Query: 268 TGR-LTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTK 326
+ L +D +SFG L E+ SG D L +RKL D
Sbjct: 191 NPKNLNLATDKWSFGTTLWEICSGG---------------DKPLSALDSQRKLQFYEDRH 235
Query: 327 LGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEAP 370
Q P A A L C++ EP RP ++ L L P
Sbjct: 236 ---QLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTP 276
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 95/209 (45%), Gaps = 12/209 (5%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLT-EVNY 141
+F+ +LGEG F V + L+ ++ + ++ + + E ++T E +
Sbjct: 31 DFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKEN---KVPYVTRERDV 83
Query: 142 LGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAK 201
+ +L HP VKL + E + G L ++ + G + I +A
Sbjct: 84 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA- 142
Query: 202 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 261
L +LH +I+RD K NILL+ + + +++DFG AK + + +GT Y
Sbjct: 143 -LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYV 199
Query: 262 APEYVATGRLTTKSDVYSFGVVLLELLSG 290
+PE + SD+++ G ++ +L++G
Sbjct: 200 SPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 95/209 (45%), Gaps = 12/209 (5%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLT-EVNY 141
+F+ +LGEG F V + L+ ++ + ++ + + E ++T E +
Sbjct: 31 DFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKEN---KVPYVTRERDV 83
Query: 142 LGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAK 201
+ +L HP VKL + E + G L ++ + G + I +A
Sbjct: 84 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA- 142
Query: 202 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 261
L +LH +I+RD K NILL+ + + +++DFG AK + + +GT Y
Sbjct: 143 -LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 199
Query: 262 APEYVATGRLTTKSDVYSFGVVLLELLSG 290
+PE + SD+++ G ++ +L++G
Sbjct: 200 SPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 75/159 (47%), Gaps = 17/159 (10%)
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 191
L E L ++ P LVKL + N +V E++ G + +HL R G P +A
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
++ LTF + +IYRD K N+L+D + +++DFG AK RT
Sbjct: 149 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT--- 195
Query: 252 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 95/209 (45%), Gaps = 12/209 (5%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLT-EVNY 141
+F+ +LGEG F V + L+ ++ + ++ + + E ++T E +
Sbjct: 31 DFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKEN---KVPYVTRERDV 83
Query: 142 LGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAK 201
+ +L HP VKL + E + G L ++ + G + I +A
Sbjct: 84 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA- 142
Query: 202 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 261
L +LH +I+RD K NILL+ + + +++DFG AK + + +GT Y
Sbjct: 143 -LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 199
Query: 262 APEYVATGRLTTKSDVYSFGVVLLELLSG 290
+PE + SD+++ G ++ +L++G
Sbjct: 200 SPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 80/180 (44%), Gaps = 17/180 (9%)
Query: 185 QPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPT 244
+P++ + + A+G+ FL + + I+RD A NILL K+ DFGLA+
Sbjct: 194 EPITMEDLISYSFQVARGMEFL--SSRKCIHRDLAARNILLSENNVVKICDFGLARDIYK 251
Query: 245 GDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQS 304
+ APE + +TKSDV+S+GV+L E+ S G
Sbjct: 252 NPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS--------LGGSPYP 303
Query: 305 LVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAIL 364
V + + S R+ R+ + P+ + + L C + +PK RPR +E++ L
Sbjct: 304 GVQMDEDFCSRLREGMRM-------RAPEYSTPEIYQIMLDCWHRDPKERPRFAELVEKL 356
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 9/94 (9%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQG--HKEWLTEVNYLGQL-H 146
LG G FG V + + K + VAVK LK EG +K +TE+ L + H
Sbjct: 35 LGRGAFGKV----VQASAFGIKKSPTCRTVAVKMLK-EGATASEYKALMTELKILTHIGH 89
Query: 147 HPNLVKLIGYCL-EGENRLLVYEFMPKGSLENHL 179
H N+V L+G C +G +++ E+ G+L N+L
Sbjct: 90 HLNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYL 123
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 124/289 (42%), Gaps = 44/289 (15%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KP-EGFQ 130
T E+ +N P +G G +G V + +G+ VAVKKL +P +
Sbjct: 23 TIWEVPERYQNLSP---VGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSII 70
Query: 131 GHKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFMPKGSLENHLFRRGPQ 185
K E+ L + H N++ L+ LE N + + + L N + Q
Sbjct: 71 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 127
Query: 186 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 245
L+ + +GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 128 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TA 183
Query: 246 DRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQS 304
D T + T Y APE + ++ D++S G ++ ELL+GR T
Sbjct: 184 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD------ 234
Query: 305 LVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 353
++ + + R++ T G + +K + +A +Q L PK+
Sbjct: 235 -------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQMPKM 275
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 124/289 (42%), Gaps = 44/289 (15%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KP-EGFQ 130
T E+ +N P +G G +G V + +G+ VAVKKL +P +
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSII 63
Query: 131 GHKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFMPKGSLENHLFRRGPQ 185
K E+ L + H N++ L+ LE N + + + L N + Q
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KXQ 120
Query: 186 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 245
L+ + +GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLARH--TD 176
Query: 246 DRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQS 304
D T + T Y APE + ++ D++S G ++ ELL+GR T
Sbjct: 177 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD------ 227
Query: 305 LVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 353
++ + + R++ T G + +K + +A +Q L PK+
Sbjct: 228 -------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQMPKM 268
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 95/209 (45%), Gaps = 12/209 (5%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLT-EVNY 141
+F+ +LGEG F V + L+ ++ + ++ + + E ++T E +
Sbjct: 33 DFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKEN---KVPYVTRERDV 85
Query: 142 LGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAK 201
+ +L HP VKL + E + G L ++ + G + I +A
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA- 144
Query: 202 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 261
L +LH +I+RD K NILL+ + + +++DFG AK + + +GT Y
Sbjct: 145 -LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 201
Query: 262 APEYVATGRLTTKSDVYSFGVVLLELLSG 290
+PE + SD+++ G ++ +L++G
Sbjct: 202 SPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 95/209 (45%), Gaps = 12/209 (5%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLT-EVNY 141
+F+ +LGEG F V + L+ ++ + ++ + + E ++T E +
Sbjct: 33 DFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKEN---KVPYVTRERDV 85
Query: 142 LGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAK 201
+ +L HP VKL + E + G L ++ + G + I +A
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA- 144
Query: 202 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 261
L +LH +I+RD K NILL+ + + +++DFG AK + + +GT Y
Sbjct: 145 -LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 201
Query: 262 APEYVATGRLTTKSDVYSFGVVLLELLSG 290
+PE + SD+++ G ++ +L++G
Sbjct: 202 SPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 124/289 (42%), Gaps = 44/289 (15%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KP-EGFQ 130
T E+ +N P +G G +G V + +G+ VAVKKL +P +
Sbjct: 23 TIWEVPERYQNLSP---VGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSII 70
Query: 131 GHKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFMPKGSLENHLFRRGPQ 185
K E+ L + H N++ L+ LE N + + + L N + Q
Sbjct: 71 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 127
Query: 186 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 245
L+ + +GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 128 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TA 183
Query: 246 DRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQS 304
D T + T Y APE + ++ D++S G ++ ELL+GR T
Sbjct: 184 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD------ 234
Query: 305 LVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 353
++ + + R++ T G + +K + +A +Q L PK+
Sbjct: 235 -------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQMPKM 275
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 108/246 (43%), Gaps = 38/246 (15%)
Query: 56 TPKSEGEILSSSNLKAFTFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGS 115
T +EG +L + LK + E + +G G FG V++ Q +
Sbjct: 50 TEDNEG-VLLTEKLKPVDY-EYREEVHWMTHQPRVGRGSFGEVHRMKDKQ---------T 98
Query: 116 GMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSL 175
G AVKK++ E F+ + E+ L P +V L G EG + E + GSL
Sbjct: 99 GFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSL 153
Query: 176 ENHLFRRGPQPLSWAVRMKVAIGAA-KGLTFLHDAESQVIYRDFKASNILLDAEFN-AKL 233
+ + G P R +G A +GL +LH ++++ D KA N+LL ++ + A L
Sbjct: 154 GQLIKQMGCLPED---RALYYLGQALEGLEYLHT--RRILHGDVKADNVLLSSDGSRAAL 208
Query: 234 SDFG---------LAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVL 284
DFG L K+ TGD + GT + APE V K D++S ++
Sbjct: 209 CDFGHALCLQPDGLGKSLLTGD------YIPGTETHMAPEVVMGKPCDAKVDIWSSCCMM 262
Query: 285 LELLSG 290
L +L+G
Sbjct: 263 LHMLNG 268
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 95/209 (45%), Gaps = 12/209 (5%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLT-EVNY 141
+F+ +LGEG F V + L+ ++ + ++ + + E ++T E +
Sbjct: 34 DFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKEN---KVPYVTRERDV 86
Query: 142 LGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAK 201
+ +L HP VKL + E + G L ++ + G + I +A
Sbjct: 87 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA- 145
Query: 202 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 261
L +LH +I+RD K NILL+ + + +++DFG AK + + +GT Y
Sbjct: 146 -LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 202
Query: 262 APEYVATGRLTTKSDVYSFGVVLLELLSG 290
+PE + SD+++ G ++ +L++G
Sbjct: 203 SPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 108/246 (43%), Gaps = 38/246 (15%)
Query: 56 TPKSEGEILSSSNLKAFTFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGS 115
T +EG +L + LK + E + +G G FG V++ Q +
Sbjct: 34 TEDNEG-VLLTEKLKPVDY-EYREEVHWMTHQPRVGRGSFGEVHRMKDKQ---------T 82
Query: 116 GMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSL 175
G AVKK++ E F+ + E+ L P +V L G EG + E + GSL
Sbjct: 83 GFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSL 137
Query: 176 ENHLFRRGPQPLSWAVRMKVAIGAA-KGLTFLHDAESQVIYRDFKASNILLDAEFN-AKL 233
+ + G P R +G A +GL +LH ++++ D KA N+LL ++ + A L
Sbjct: 138 GQLIKQMGCLPED---RALYYLGQALEGLEYLHT--RRILHGDVKADNVLLSSDGSRAAL 192
Query: 234 SDFG---------LAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVL 284
DFG L K+ TGD + GT + APE V K D++S ++
Sbjct: 193 CDFGHALCLQPDGLGKSLLTGD------YIPGTETHMAPEVVMGKPCDAKVDIWSSCCMM 246
Query: 285 LELLSG 290
L +L+G
Sbjct: 247 LHMLNG 252
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 75/159 (47%), Gaps = 10/159 (6%)
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKV 195
E+ + L HP LV L + E+ +V + + G L HL ++ V++ +
Sbjct: 63 FKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHL-QQNVHFKEETVKLFI 121
Query: 196 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVM 255
L +L + ++I+RD K NILLD + ++DF +A P T ++T +
Sbjct: 122 C-ELVMALDYLQN--QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR--ETQITT-MA 175
Query: 256 GTHGYAAPEYVATGR---LTTKSDVYSFGVVLLELLSGR 291
GT Y APE ++ + + D +S GV ELL GR
Sbjct: 176 GTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGR 214
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 110/268 (41%), Gaps = 31/268 (11%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLT------EVNYLG 143
LG G F V K + G+G A K +K + ++ EVN L
Sbjct: 13 LGSGQFAIVRK---------CRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILR 63
Query: 144 QLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGL 203
++ HPN++ L + +L+ E + G L + L + A + I G+
Sbjct: 64 EIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI--LDGV 121
Query: 204 TFLHDAESQVIYRDFKASNI-LLDAEF---NAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 259
+LH ++ + D K NI LLD KL DFG+A G+ + GT
Sbjct: 122 HYLHS--KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIFGTPE 176
Query: 260 YAAPEYVATGRLTTKSDVYSFGVVLLELLSGRC-----AVDKTKVGIEQSLVDWAKPYLS 314
+ APE V L ++D++S GV+ LLSG +T I D+ + Y S
Sbjct: 177 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFS 236
Query: 315 DKRKLFRIMDTKLGGQYPQKAAHTAATL 342
+ +L + +L + P++ A +L
Sbjct: 237 NTSELAKDFIRRLLVKDPKRRMTIAQSL 264
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 124/289 (42%), Gaps = 44/289 (15%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KP-EGFQ 130
T E+ +N P +G G +G V + +G+ VAVKKL +P +
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSII 63
Query: 131 GHKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFMPKGSLENHLFRRGPQ 185
K E+ L + H N++ L+ LE N + + + L N + Q
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KXQ 120
Query: 186 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 245
L+ + +GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TD 176
Query: 246 DRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQS 304
D T + T Y APE + ++ D++S G ++ ELL+GR T
Sbjct: 177 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD------ 227
Query: 305 LVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 353
++ + + R++ T G + +K + +A +Q L PK+
Sbjct: 228 -------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQMPKM 268
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 75/159 (47%), Gaps = 17/159 (10%)
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 191
L E L ++ P LVKL + N +V E++ G + +HL R G P +A
Sbjct: 110 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAA 169
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
++ LTF + +IYRD K N+L+D + +++DFG AK RT
Sbjct: 170 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT--- 216
Query: 252 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 217 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 124/289 (42%), Gaps = 44/289 (15%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KP-EGFQ 130
T E+ +N P +G G +G V + +G+ VAVKKL +P +
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSII 63
Query: 131 GHKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFMPKGSLENHLFRRGPQ 185
K E+ L + H N++ L+ LE N + + + L N + Q
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 120
Query: 186 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 245
L+ + +GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TD 176
Query: 246 DRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQS 304
D T + T Y APE + ++ D++S G ++ ELL+GR T
Sbjct: 177 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD------ 227
Query: 305 LVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 353
++ + + R++ T G + +K + +A +Q L PK+
Sbjct: 228 -------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQMPKM 268
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 124/289 (42%), Gaps = 44/289 (15%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KP-EGFQ 130
T E+ +N P +G G +G V + +G+ VAVKKL +P +
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSII 63
Query: 131 GHKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFMPKGSLENHLFRRGPQ 185
K E+ L + H N++ L+ LE N + + + L N + Q
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 120
Query: 186 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 245
L+ + +GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TD 176
Query: 246 DRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQS 304
D T + T Y APE + ++ D++S G ++ ELL+GR T
Sbjct: 177 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD------ 227
Query: 305 LVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 353
++ + + R++ T G + +K + +A +Q L PK+
Sbjct: 228 -------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQMPKM 268
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 108/248 (43%), Gaps = 43/248 (17%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFV---YKGWIDQHSLSPAKPGSGMVVAVKKL-KPEG 128
TF LK +N +P +G G G V Y +D++ VA+KKL +P
Sbjct: 57 TFTVLKR-YQNLKP---IGSGAQGIVCAAYDAVLDRN------------VAIKKLSRPFQ 100
Query: 129 FQGH-KEWLTEVNYLGQLHHPNLVKLIGYCL------EGENRLLVYEFMPKGSLENHLFR 181
Q H K E+ + ++H N++ L+ E ++ LV E M +
Sbjct: 101 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME 160
Query: 182 RGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKA 241
+ +S+ + + G+ LH A +I+RD K SNI++ ++ K+ DFGLA+
Sbjct: 161 LDHERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLART 213
Query: 242 GPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLE------LLSGRCAVD 295
T + + T + T Y APE + D++S G ++ E L GR +D
Sbjct: 214 AGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 270
Query: 296 KTKVGIEQ 303
+ IEQ
Sbjct: 271 QWNKVIEQ 278
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 110/268 (41%), Gaps = 31/268 (11%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLT------EVNYLG 143
LG G F V K + G+G A K +K + ++ EVN L
Sbjct: 20 LGSGQFAIVRK---------CRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILR 70
Query: 144 QLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGL 203
++ HPN++ L + +L+ E + G L + L + A + I G+
Sbjct: 71 EIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI--LDGV 128
Query: 204 TFLHDAESQVIYRDFKASNI-LLDAEF---NAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 259
+LH ++ + D K NI LLD KL DFG+A G+ + GT
Sbjct: 129 HYLHS--KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIFGTPE 183
Query: 260 YAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAV-----DKTKVGIEQSLVDWAKPYLS 314
+ APE V L ++D++S GV+ LLSG +T I D+ + Y S
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFS 243
Query: 315 DKRKLFRIMDTKLGGQYPQKAAHTAATL 342
+ +L + +L + P++ A +L
Sbjct: 244 NTSELAKDFIRRLLVKDPKRRMXIAQSL 271
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 124/289 (42%), Gaps = 44/289 (15%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KP-EGFQ 130
T E+ +N P +G G +G V + +G+ VAVKKL +P +
Sbjct: 23 TIWEVPERYQNLSP---VGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSII 70
Query: 131 GHKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFMPKGSLENHLFRRGPQ 185
K E+ L + H N++ L+ LE N + + + L N + Q
Sbjct: 71 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 127
Query: 186 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 245
L+ + +GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 128 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TA 183
Query: 246 DRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQS 304
D T + T Y APE + ++ D++S G ++ ELL+GR T
Sbjct: 184 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD------ 234
Query: 305 LVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 353
++ + + R++ T G + +K + +A +Q L PK+
Sbjct: 235 -------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQMPKM 275
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 95/209 (45%), Gaps = 12/209 (5%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLT-EVNY 141
+F+ +LGEG F V + L+ ++ + ++ + + E ++T E +
Sbjct: 15 DFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKEN---KVPYVTRERDV 67
Query: 142 LGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAK 201
+ +L HP VKL + E + G L ++ + G + I +A
Sbjct: 68 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA- 126
Query: 202 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 261
L +LH +I+RD K NILL+ + + +++DFG AK + + +GT Y
Sbjct: 127 -LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 183
Query: 262 APEYVATGRLTTKSDVYSFGVVLLELLSG 290
+PE + SD+++ G ++ +L++G
Sbjct: 184 SPELLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 95/209 (45%), Gaps = 12/209 (5%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLT-EVNY 141
+F+ +LGEG F V + L+ ++ + ++ + + E ++T E +
Sbjct: 33 DFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKEN---KVPYVTRERDV 85
Query: 142 LGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAK 201
+ +L HP VKL + E + G L ++ + G + I +A
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA- 144
Query: 202 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 261
L +LH +I+RD K NILL+ + + +++DFG AK + + +GT Y
Sbjct: 145 -LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 201
Query: 262 APEYVATGRLTTKSDVYSFGVVLLELLSG 290
+PE + SD+++ G ++ +L++G
Sbjct: 202 SPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 75/159 (47%), Gaps = 17/159 (10%)
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 191
L E L ++ P LVKL + N +V E++ G + +HL R G P +A
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAA 148
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
++ LTF + +IYRD K N+L+D + +++DFG AK RT
Sbjct: 149 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT--- 195
Query: 252 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 75/159 (47%), Gaps = 17/159 (10%)
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 191
L E L ++ P LVKL + N +V E++ G + +HL R G P +A
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAA 148
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
++ LTF + +IYRD K N+L+D + +++DFG AK RT
Sbjct: 149 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT--- 195
Query: 252 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 95/209 (45%), Gaps = 12/209 (5%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLT-EVNY 141
+F+ +LGEG F V + L+ ++ + ++ + + E ++T E +
Sbjct: 33 DFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKEN---KVPYVTRERDV 85
Query: 142 LGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAK 201
+ +L HP VKL + E + G L ++ + G + I +A
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA- 144
Query: 202 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 261
L +LH +I+RD K NILL+ + + +++DFG AK + + +GT Y
Sbjct: 145 -LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 201
Query: 262 APEYVATGRLTTKSDVYSFGVVLLELLSG 290
+PE + SD+++ G ++ +L++G
Sbjct: 202 SPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 75/159 (47%), Gaps = 17/159 (10%)
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 191
L E L ++ P LVKL + N +V E++ G + +HL R G P +A
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAA 148
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
++ LTF + +IYRD K N+L+D + +++DFG AK RT
Sbjct: 149 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT--- 195
Query: 252 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 75/159 (47%), Gaps = 17/159 (10%)
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 191
L E L ++ P LVKL + N +V E++ G + +HL R G P +A
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAA 148
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
++ LTF + +IYRD K N+L+D + +++DFG AK RT
Sbjct: 149 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT--- 195
Query: 252 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 75/159 (47%), Gaps = 17/159 (10%)
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 191
L E L ++ P LVKL + N +V E++ G + +HL R G P +A
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
++ LTF + +IYRD K N+L+D + +++DFG AK RT
Sbjct: 149 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT--- 195
Query: 252 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 124/289 (42%), Gaps = 44/289 (15%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KP-EGFQ 130
T E+ +N P +G G +G V + +G+ VAVKKL +P +
Sbjct: 18 TIWEVPERYQNLSP---VGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSII 65
Query: 131 GHKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFMPKGSLENHLFRRGPQ 185
K E+ L + H N++ L+ LE N + + + L N + Q
Sbjct: 66 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 122
Query: 186 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 245
L+ + +GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 123 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TD 178
Query: 246 DRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQS 304
D T + T Y APE + ++ D++S G ++ ELL+GR T
Sbjct: 179 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD------ 229
Query: 305 LVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 353
++ + + R++ T G + +K + +A +Q L PK+
Sbjct: 230 -------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQMPKM 270
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 92/222 (41%), Gaps = 17/222 (7%)
Query: 72 FTFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQG 131
F N + N+ LG+G F V + L A ++ KKL FQ
Sbjct: 19 FMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFA----AKIINTKKLSARDFQK 74
Query: 132 HKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAV 191
+ E +L HPN+V+L E LV++ + G L + R + S A
Sbjct: 75 LER---EARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR--EFYSEAD 129
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN---AKLSDFGLAKAGPTGDRT 248
+ + + H + +++R+ K N+LL ++ KL+DFGLA +
Sbjct: 130 ASHCIQQILESIAYCH--SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW 187
Query: 249 HVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
H GT GY +PE + + D+++ GV+L LL G
Sbjct: 188 H---GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 75/159 (47%), Gaps = 17/159 (10%)
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 191
L E L ++ P LVKL + N +V E++ G + +HL R G P +A
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
++ LTF + +IYRD K N+L+D + +++DFG AK RT
Sbjct: 149 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT--- 195
Query: 252 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 75/159 (47%), Gaps = 17/159 (10%)
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 191
L E L ++ P LVKL + N +V E++ G + +HL R G P +A
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
++ LTF + +IYRD K N+L+D + +++DFG AK RT
Sbjct: 149 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT--- 195
Query: 252 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 95/209 (45%), Gaps = 12/209 (5%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLT-EVNY 141
+F+ +LGEG F V + L+ ++ + ++ + + E ++T E +
Sbjct: 36 DFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKEN---KVPYVTRERDV 88
Query: 142 LGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAK 201
+ +L HP VKL + E + G L ++ + G + I +A
Sbjct: 89 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA- 147
Query: 202 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 261
L +LH +I+RD K NILL+ + + +++DFG AK + + +GT Y
Sbjct: 148 -LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 204
Query: 262 APEYVATGRLTTKSDVYSFGVVLLELLSG 290
+PE + SD+++ G ++ +L++G
Sbjct: 205 SPELLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 75/159 (47%), Gaps = 17/159 (10%)
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 191
L E L ++ P LVKL + N +V E++ G + +HL R G P +A
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
++ LTF + +IYRD K N+L+D + +++DFG AK RT
Sbjct: 149 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT--- 195
Query: 252 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 75/159 (47%), Gaps = 17/159 (10%)
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 191
L E L ++ P LVKL + N +V E++ G + +HL R G P +A
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
++ LTF + +IYRD K N+L+D + +++DFG AK RT
Sbjct: 150 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT--- 196
Query: 252 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 197 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 124/289 (42%), Gaps = 44/289 (15%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KP-EGFQ 130
T E+ +N P +G G +G V + +G+ VAVKKL +P +
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSII 63
Query: 131 GHKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFMPKGSLENHLFRRGPQ 185
K E+ L + H N++ L+ LE N + + + L N + Q
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 120
Query: 186 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 245
L+ + +GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TD 176
Query: 246 DRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQS 304
D T + T Y APE + ++ D++S G ++ ELL+GR T
Sbjct: 177 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD------ 227
Query: 305 LVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 353
++ + + R++ T G + +K + +A +Q L PK+
Sbjct: 228 -------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQMPKM 268
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 124/289 (42%), Gaps = 44/289 (15%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KP-EGFQ 130
T E+ +N P +G G +G V + +G+ VAVKKL +P +
Sbjct: 36 TIWEVPERYQNLSP---VGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSII 83
Query: 131 GHKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFMPKGSLENHLFRRGPQ 185
K E+ L + H N++ L+ LE N + + + L N + Q
Sbjct: 84 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 140
Query: 186 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 245
L+ + +GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 141 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TD 196
Query: 246 DRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQS 304
D T + T Y APE + ++ D++S G ++ ELL+GR T
Sbjct: 197 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD------ 247
Query: 305 LVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 353
++ + + R++ T G + +K + +A +Q L PK+
Sbjct: 248 -------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQMPKM 288
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 75/159 (47%), Gaps = 17/159 (10%)
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 191
L E L ++ P LVKL + N +V E++ G + +HL R G P +A
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
++ LTF + +IYRD K N+L+D + +++DFG AK RT
Sbjct: 149 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT--- 195
Query: 252 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 196 WXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 71/153 (46%), Gaps = 4/153 (2%)
Query: 138 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 197
E + + +L HP VKL + E + G L ++ + G + I
Sbjct: 80 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 139
Query: 198 GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 257
+A L +LH +I+RD K NILL+ + + +++DFG AK + + +GT
Sbjct: 140 VSA--LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 258 HGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
Y +PE + SD+++ G ++ +L++G
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 124/289 (42%), Gaps = 44/289 (15%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KP-EGFQ 130
T E+ +N P +G G +G V + +G+ VAVKKL +P +
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSII 63
Query: 131 GHKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFMPKGSLENHLFRRGPQ 185
K E+ L + H N++ L+ LE N + + + L N + Q
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 120
Query: 186 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 245
L+ + +GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TD 176
Query: 246 DRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQS 304
D T + T Y APE + ++ D++S G ++ ELL+GR T
Sbjct: 177 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD------ 227
Query: 305 LVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 353
++ + + R++ T G + +K + +A +Q L PK+
Sbjct: 228 -------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQMPKM 268
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 124/289 (42%), Gaps = 44/289 (15%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KP-EGFQ 130
T E+ +N P +G G +G V + +G+ VAVKKL +P +
Sbjct: 35 TIWEVPERYQNLSP---VGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSII 82
Query: 131 GHKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFMPKGSLENHLFRRGPQ 185
K E+ L + H N++ L+ LE N + + + L N + Q
Sbjct: 83 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 139
Query: 186 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 245
L+ + +GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 140 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TD 195
Query: 246 DRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQS 304
D T + T Y APE + ++ D++S G ++ ELL+GR T
Sbjct: 196 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD------ 246
Query: 305 LVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 353
++ + + R++ T G + +K + +A +Q L PK+
Sbjct: 247 -------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQMPKM 287
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 124/289 (42%), Gaps = 44/289 (15%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KP-EGFQ 130
T E+ +N P +G G +G V + +G+ VAVKKL +P +
Sbjct: 21 TIWEVPERYQNLSP---VGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSII 68
Query: 131 GHKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFMPKGSLENHLFRRGPQ 185
K E+ L + H N++ L+ LE N + + + L N + Q
Sbjct: 69 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 125
Query: 186 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 245
L+ + +GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 126 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLARH--TD 181
Query: 246 DRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQS 304
D T + T Y APE + ++ D++S G ++ ELL+GR T
Sbjct: 182 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD------ 232
Query: 305 LVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 353
++ + + R++ T G + +K + +A +Q L PK+
Sbjct: 233 -------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQMPKM 273
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 124/289 (42%), Gaps = 44/289 (15%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KP-EGFQ 130
T E+ +N P +G G +G V + +G+ VAVKKL +P +
Sbjct: 39 TIWEVPERYQNLSP---VGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSII 86
Query: 131 GHKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFMPKGSLENHLFRRGPQ 185
K E+ L + H N++ L+ LE N + + + L N + Q
Sbjct: 87 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 143
Query: 186 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 245
L+ + +GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 144 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TD 199
Query: 246 DRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQS 304
D T + T Y APE + ++ D++S G ++ ELL+GR T
Sbjct: 200 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD------ 250
Query: 305 LVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 353
++ + + R++ T G + +K + +A +Q L PK+
Sbjct: 251 -------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQMPKM 291
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 110/268 (41%), Gaps = 31/268 (11%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLT------EVNYLG 143
LG G F V K + G+G A K +K + ++ EVN L
Sbjct: 34 LGSGQFAIVRK---------CRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILR 84
Query: 144 QLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGL 203
++ HPN++ L + +L+ E + G L + L + A + I G+
Sbjct: 85 EIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI--LDGV 142
Query: 204 TFLHDAESQVIYRDFKASNI-LLDAEF---NAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 259
+LH ++ + D K NI LLD KL DFG+A G+ + GT
Sbjct: 143 HYLHS--KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIFGTPE 197
Query: 260 YAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAV-----DKTKVGIEQSLVDWAKPYLS 314
+ APE V L ++D++S GV+ LLSG +T I D+ + Y S
Sbjct: 198 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFS 257
Query: 315 DKRKLFRIMDTKLGGQYPQKAAHTAATL 342
+ +L + +L + P++ A +L
Sbjct: 258 NTSELAKDFIRRLLVKDPKRRMXIAQSL 285
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 75/159 (47%), Gaps = 17/159 (10%)
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 191
L E L ++ P LVKL + N +V E++ G + +HL R G P +A
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
++ LTF + +IYRD K N+L+D + +++DFG AK RT
Sbjct: 149 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT--- 195
Query: 252 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 124/289 (42%), Gaps = 44/289 (15%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KP-EGFQ 130
T E+ +N P +G G +G V + +G+ VAVKKL +P +
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSII 63
Query: 131 GHKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFMPKGSLENHLFRRGPQ 185
K E+ L + H N++ L+ LE N + + + L N + Q
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 120
Query: 186 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 245
L+ + +GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TD 176
Query: 246 DRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQS 304
D T + T Y APE + ++ D++S G ++ ELL+GR T
Sbjct: 177 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD------ 227
Query: 305 LVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 353
++ + + R++ T G + +K + +A +Q L PK+
Sbjct: 228 -------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQMPKM 268
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 124/289 (42%), Gaps = 44/289 (15%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KP-EGFQ 130
T E+ +N P +G G +G V + +G+ VAVKKL +P +
Sbjct: 21 TIWEVPERYQNLSP---VGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSII 68
Query: 131 GHKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFMPKGSLENHLFRRGPQ 185
K E+ L + H N++ L+ LE N + + + L N + Q
Sbjct: 69 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 125
Query: 186 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 245
L+ + +GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 126 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TD 181
Query: 246 DRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQS 304
D T + T Y APE + ++ D++S G ++ ELL+GR T
Sbjct: 182 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD------ 232
Query: 305 LVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 353
++ + + R++ T G + +K + +A +Q L PK+
Sbjct: 233 -------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQMPKM 273
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 124/289 (42%), Gaps = 44/289 (15%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KP-EGFQ 130
T E+ +N P +G G +G V + +G+ VAVKKL +P +
Sbjct: 22 TIWEVPERYQNLSP---VGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSII 69
Query: 131 GHKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFMPKGSLENHLFRRGPQ 185
K E+ L + H N++ L+ LE N + + + L N + Q
Sbjct: 70 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 126
Query: 186 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 245
L+ + +GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 127 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TD 182
Query: 246 DRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQS 304
D T + T Y APE + ++ D++S G ++ ELL+GR T
Sbjct: 183 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD------ 233
Query: 305 LVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 353
++ + + R++ T G + +K + +A +Q L PK+
Sbjct: 234 -------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQMPKM 274
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 124/289 (42%), Gaps = 44/289 (15%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KP-EGFQ 130
T E+ +N P +G G +G V + +G+ VAVKKL +P +
Sbjct: 15 TIWEVPERYQNLSP---VGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSII 62
Query: 131 GHKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFMPKGSLENHLFRRGPQ 185
K E+ L + H N++ L+ LE N + + + L N + Q
Sbjct: 63 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 119
Query: 186 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 245
L+ + +GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 120 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TD 175
Query: 246 DRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQS 304
D T + T Y APE + ++ D++S G ++ ELL+GR T
Sbjct: 176 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD------ 226
Query: 305 LVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 353
++ + + R++ T G + +K + +A +Q L PK+
Sbjct: 227 -------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQMPKM 267
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 124/289 (42%), Gaps = 44/289 (15%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KP-EGFQ 130
T E+ +N P +G G +G V + +G+ VAVKKL +P +
Sbjct: 28 TIWEVPERYQNLSP---VGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSII 75
Query: 131 GHKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFMPKGSLENHLFRRGPQ 185
K E+ L + H N++ L+ LE N + + + L N + Q
Sbjct: 76 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 132
Query: 186 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 245
L+ + +GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 133 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TD 188
Query: 246 DRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQS 304
D T + T Y APE + ++ D++S G ++ ELL+GR T
Sbjct: 189 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD------ 239
Query: 305 LVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 353
++ + + R++ T G + +K + +A +Q L PK+
Sbjct: 240 -------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQMPKM 280
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 124/289 (42%), Gaps = 44/289 (15%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KP-EGFQ 130
T E+ +N P +G G +G V + +G+ VAVKKL +P +
Sbjct: 28 TIWEVPERYQNLSP---VGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSII 75
Query: 131 GHKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFMPKGSLENHLFRRGPQ 185
K E+ L + H N++ L+ LE N + + + L N + Q
Sbjct: 76 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 132
Query: 186 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 245
L+ + +GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 133 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TD 188
Query: 246 DRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQS 304
D T + T Y APE + ++ D++S G ++ ELL+GR T
Sbjct: 189 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD------ 239
Query: 305 LVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 353
++ + + R++ T G + +K + +A +Q L PK+
Sbjct: 240 -------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQMPKM 280
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 75/159 (47%), Gaps = 17/159 (10%)
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 191
L E L ++ P LVKL + N +V E++ G + +HL R G P +A
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
++ LTF + +IYRD K N+L+D + +++DFG AK RT
Sbjct: 149 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT--- 195
Query: 252 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 196 WXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 75/159 (47%), Gaps = 17/159 (10%)
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 191
L E L ++ P LVKL + N +V E++ G + +HL R G P +A
Sbjct: 84 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAA 143
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
++ LTF + +IYRD K N+L+D + +++DFG AK RT
Sbjct: 144 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT--- 190
Query: 252 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 191 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 124/289 (42%), Gaps = 44/289 (15%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KP-EGFQ 130
T E+ +N P +G G +G V + +G+ VAVKKL +P +
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSII 63
Query: 131 GHKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFMPKGSLENHLFRRGPQ 185
K E+ L + H N++ L+ LE N + + + L N + Q
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 120
Query: 186 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 245
L+ + +GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TD 176
Query: 246 DRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQS 304
D T + T Y APE + ++ D++S G ++ ELL+GR T
Sbjct: 177 DEM---TGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD------ 227
Query: 305 LVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 353
++ + + R++ T G + +K + +A +Q L PK+
Sbjct: 228 -------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQMPKM 268
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 75/159 (47%), Gaps = 17/159 (10%)
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 191
L E L ++ P LVKL + N +V E++ G + +HL R G P +A
Sbjct: 76 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 135
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
++ LTF + +IYRD K N+L+D + +++DFG AK RT
Sbjct: 136 QIV--------LTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKR--VKGRT--- 182
Query: 252 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 183 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 108/248 (43%), Gaps = 43/248 (17%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFV---YKGWIDQHSLSPAKPGSGMVVAVKKL-KPEG 128
TF LK +N +P +G G G V Y +D++ VA+KKL +P
Sbjct: 20 TFTVLKR-YQNLKP---IGSGAQGIVCAAYDAVLDRN------------VAIKKLSRPFQ 63
Query: 129 FQGH-KEWLTEVNYLGQLHHPNLVKLIGYCL------EGENRLLVYEFMPKGSLENHLFR 181
Q H K E+ + ++H N++ L+ E ++ LV E M +
Sbjct: 64 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME 123
Query: 182 RGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKA 241
+ +S+ + + G+ LH A +I+RD K SNI++ ++ K+ DFGLA+
Sbjct: 124 LDHERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLART 176
Query: 242 GPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLE------LLSGRCAVD 295
T + + T + T Y APE + D++S G ++ E L GR +D
Sbjct: 177 AGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 233
Query: 296 KTKVGIEQ 303
+ IEQ
Sbjct: 234 QWNKVIEQ 241
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 108/248 (43%), Gaps = 43/248 (17%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFV---YKGWIDQHSLSPAKPGSGMVVAVKKL-KPEG 128
TF LK +N +P +G G G V Y +D++ VA+KKL +P
Sbjct: 18 TFTVLKR-YQNLKP---IGSGAQGIVCAAYDAVLDRN------------VAIKKLSRPFQ 61
Query: 129 FQGH-KEWLTEVNYLGQLHHPNLVKLIGYCL------EGENRLLVYEFMPKGSLENHLFR 181
Q H K E+ + ++H N++ L+ E ++ LV E M +
Sbjct: 62 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME 121
Query: 182 RGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKA 241
+ +S+ + + G+ LH A +I+RD K SNI++ ++ K+ DFGLA+
Sbjct: 122 LDHERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLART 174
Query: 242 GPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLE------LLSGRCAVD 295
T + + T + T Y APE + D++S G ++ E L GR +D
Sbjct: 175 AGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 231
Query: 296 KTKVGIEQ 303
+ IEQ
Sbjct: 232 QWNKVIEQ 239
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 108/248 (43%), Gaps = 43/248 (17%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFV---YKGWIDQHSLSPAKPGSGMVVAVKKL-KPEG 128
TF LK +N +P +G G G V Y +D++ VA+KKL +P
Sbjct: 19 TFTVLKR-YQNLKP---IGSGAQGIVCAAYDAVLDRN------------VAIKKLSRPFQ 62
Query: 129 FQGH-KEWLTEVNYLGQLHHPNLVKLIGYCL------EGENRLLVYEFMPKGSLENHLFR 181
Q H K E+ + ++H N++ L+ E ++ LV E M +
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME 122
Query: 182 RGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKA 241
+ +S+ + + G+ LH A +I+RD K SNI++ ++ K+ DFGLA+
Sbjct: 123 LDHERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLART 175
Query: 242 GPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLE------LLSGRCAVD 295
T + + T + T Y APE + D++S G ++ E L GR +D
Sbjct: 176 AGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 232
Query: 296 KTKVGIEQ 303
+ IEQ
Sbjct: 233 QWNKVIEQ 240
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 124/289 (42%), Gaps = 44/289 (15%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KP-EGFQ 130
T E+ +N P +G G +G V + +G+ VAVKKL +P +
Sbjct: 18 TIWEVPERYQNLSP---VGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSII 65
Query: 131 GHKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFMPKGSLENHLFRRGPQ 185
K E+ L + H N++ L+ LE N + + + L N + Q
Sbjct: 66 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 122
Query: 186 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 245
L+ + +GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 123 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TD 178
Query: 246 DRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQS 304
D T + T Y APE + ++ D++S G ++ ELL+GR T
Sbjct: 179 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD------ 229
Query: 305 LVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 353
++ + + R++ T G + +K + +A +Q L PK+
Sbjct: 230 -------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQMPKM 270
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 85/183 (46%), Gaps = 18/183 (9%)
Query: 116 GMVVAVKKL-KPEGFQGH-KEWLTEVNYLGQLHHPNLVKLIGYCL------EGENRLLVY 167
G+ VAVKKL +P Q H K E+ L ++H N++ L+ E ++ LV
Sbjct: 47 GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 106
Query: 168 EFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDA 227
E M + + +S+ + + G+ LH A +I+RD K SNI++ +
Sbjct: 107 ELMDANLCQVIHMELDHERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKS 159
Query: 228 EFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLEL 287
+ K+ DFGLA+ T + T + T Y APE + D++S G ++ EL
Sbjct: 160 DCTLKILDFGLARTASTN---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEL 216
Query: 288 LSG 290
+ G
Sbjct: 217 VKG 219
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 77/157 (49%), Gaps = 13/157 (8%)
Query: 138 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWA-VRMKVA 196
E+ L ++ H N+V L + LV + + G L + + RG A + ++
Sbjct: 56 EIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQV 115
Query: 197 IGAAKGLTFLHDAESQVIYRDFKASNIL-LDAEFNAKL--SDFGLAKAGPTGDRTHVSTQ 253
+ A K +LH E+ +++RD K N+L L E N+K+ +DFGL+K G + +
Sbjct: 116 LSAVK---YLH--ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG----IMST 166
Query: 254 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
GT GY APE +A + D +S GV+ LL G
Sbjct: 167 ACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCG 203
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 92/203 (45%), Gaps = 22/203 (10%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLK----PEGFQGHKEWLTEVNYLGQL 145
+GEG +G V+K + +VA+K+++ EG L E+ L +L
Sbjct: 10 IGEGTYGTVFKA---------KNRETHEIVALKRVRLDDDDEGVPSSA--LREICLLKEL 58
Query: 146 HHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTF 205
H N+V+L + LV+EF + L+ + F L + KGL F
Sbjct: 59 KHKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKY-FDSCNGDLDPEIVKSFLFQLLKGLGF 116
Query: 206 LHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEY 265
H V++RD K N+L++ KL+DFGLA+A R + + V T Y P+
Sbjct: 117 CH--SRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV--TLWYRPPDV 172
Query: 266 VATGRL-TTKSDVYSFGVVLLEL 287
+ +L +T D++S G + EL
Sbjct: 173 LFGAKLYSTSIDMWSAGCIFAEL 195
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 95/209 (45%), Gaps = 12/209 (5%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLT-EVNY 141
+F+ +LGEG F V + L+ ++ + ++ + + E ++T E +
Sbjct: 30 DFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKEN---KVPYVTRERDV 82
Query: 142 LGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAK 201
+ +L HP VKL + E + G L ++ + G + I +A
Sbjct: 83 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA- 141
Query: 202 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 261
L +LH +I+RD K NILL+ + + +++DFG AK + + +GT Y
Sbjct: 142 -LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYV 198
Query: 262 APEYVATGRLTTKSDVYSFGVVLLELLSG 290
+PE + SD+++ G ++ +L++G
Sbjct: 199 SPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 124/289 (42%), Gaps = 44/289 (15%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KP-EGFQ 130
T E+ +N P +G G +G V + +G+ VAVKKL +P +
Sbjct: 22 TIWEVPERYQNLSP---VGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSII 69
Query: 131 GHKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFMPKGSLENHLFRRGPQ 185
K E+ L + H N++ L+ LE N + + + L N + Q
Sbjct: 70 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 126
Query: 186 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 245
L+ + +GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 127 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TD 182
Query: 246 DRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQS 304
D T + T Y APE + ++ D++S G ++ ELL+GR T
Sbjct: 183 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD------ 233
Query: 305 LVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 353
++ + + R++ T G + +K + +A +Q L PK+
Sbjct: 234 -------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQMPKM 274
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 124/289 (42%), Gaps = 44/289 (15%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KP-EGFQ 130
T E+ +N P +G G +G V + +G+ VAVKKL +P +
Sbjct: 13 TIWEVPERYQNLSP---VGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSII 60
Query: 131 GHKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFMPKGSLENHLFRRGPQ 185
K E+ L + H N++ L+ LE N + + + L N + Q
Sbjct: 61 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 117
Query: 186 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 245
L+ + +GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 118 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TD 173
Query: 246 DRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQS 304
D T + T Y APE + ++ D++S G ++ ELL+GR T
Sbjct: 174 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD------ 224
Query: 305 LVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 353
++ + + R++ T G + +K + +A +Q L PK+
Sbjct: 225 -------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQMPKM 265
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 108/248 (43%), Gaps = 43/248 (17%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFV---YKGWIDQHSLSPAKPGSGMVVAVKKL-KPEG 128
TF LK +N +P +G G G V Y +D++ VA+KKL +P
Sbjct: 19 TFTVLKR-YQNLKP---IGSGAQGIVCAAYDAVLDRN------------VAIKKLSRPFQ 62
Query: 129 FQGH-KEWLTEVNYLGQLHHPNLVKLIGYCL------EGENRLLVYEFMPKGSLENHLFR 181
Q H K E+ + ++H N++ L+ E ++ LV E M +
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME 122
Query: 182 RGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKA 241
+ +S+ + + G+ LH A +I+RD K SNI++ ++ K+ DFGLA+
Sbjct: 123 LDHERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLART 175
Query: 242 GPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLE------LLSGRCAVD 295
T + + T + T Y APE + D++S G ++ E L GR +D
Sbjct: 176 AGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 232
Query: 296 KTKVGIEQ 303
+ IEQ
Sbjct: 233 QWNKVIEQ 240
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 124/289 (42%), Gaps = 44/289 (15%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KP-EGFQ 130
T E+ +N P +G G +G V + +G+ VAVKKL +P +
Sbjct: 27 TIWEVPERYQNLSP---VGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSII 74
Query: 131 GHKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFMPKGSLENHLFRRGPQ 185
K E+ L + H N++ L+ LE N + + + L N + Q
Sbjct: 75 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 131
Query: 186 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 245
L+ + +GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 132 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TD 187
Query: 246 DRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQS 304
D T + T Y APE + ++ D++S G ++ ELL+GR T
Sbjct: 188 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD------ 238
Query: 305 LVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 353
++ + + R++ T G + +K + +A +Q L PK+
Sbjct: 239 -------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQMPKM 279
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 95/209 (45%), Gaps = 12/209 (5%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLT-EVNY 141
+F+ +LGEG F V + L+ ++ + ++ + + E ++T E +
Sbjct: 33 DFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKEN---KVPYVTRERDV 85
Query: 142 LGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAK 201
+ +L HP VKL + E + G L ++ + G + I +A
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA- 144
Query: 202 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 261
L +LH +I+RD K NILL+ + + +++DFG AK + + +GT Y
Sbjct: 145 -LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 201
Query: 262 APEYVATGRLTTKSDVYSFGVVLLELLSG 290
+PE + SD+++ G ++ +L++G
Sbjct: 202 SPELLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 124/289 (42%), Gaps = 44/289 (15%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KP-EGFQ 130
T E+ +N P +G G +G V + +G+ VAVKKL +P +
Sbjct: 18 TIWEVPERYQNLSP---VGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSII 65
Query: 131 GHKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFMPKGSLENHLFRRGPQ 185
K E+ L + H N++ L+ LE N + + + L N + Q
Sbjct: 66 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 122
Query: 186 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 245
L+ + +GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 123 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TD 178
Query: 246 DRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQS 304
D T + T Y APE + ++ D++S G ++ ELL+GR T
Sbjct: 179 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD------ 229
Query: 305 LVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 353
++ + + R++ T G + +K + +A +Q L PK+
Sbjct: 230 -------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQMPKM 270
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 108/248 (43%), Gaps = 43/248 (17%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFV---YKGWIDQHSLSPAKPGSGMVVAVKKL-KPEG 128
TF LK +N +P +G G G V Y +D++ VA+KKL +P
Sbjct: 19 TFTVLKR-YQNLKP---IGSGAQGIVCAAYDAVLDRN------------VAIKKLSRPFQ 62
Query: 129 FQGH-KEWLTEVNYLGQLHHPNLVKLIGYCL------EGENRLLVYEFMPKGSLENHLFR 181
Q H K E+ + ++H N++ L+ E ++ LV E M +
Sbjct: 63 NQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME 122
Query: 182 RGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKA 241
+ +S+ + + G+ LH A +I+RD K SNI++ ++ K+ DFGLA+
Sbjct: 123 LDHERMSYLLYQMLX-----GIKHLHSA--GIIHRDLKPSNIVVKSDXTLKILDFGLART 175
Query: 242 GPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLE------LLSGRCAVD 295
T + + T + T Y APE + D++S G ++ E L GR +D
Sbjct: 176 AGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 232
Query: 296 KTKVGIEQ 303
+ IEQ
Sbjct: 233 QWNKVIEQ 240
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 124/289 (42%), Gaps = 44/289 (15%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KP-EGFQ 130
T E+ +N P +G G +G V + +G+ VAVKKL +P +
Sbjct: 23 TIWEVPERYQNLSP---VGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSII 70
Query: 131 GHKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFMPKGSLENHLFRRGPQ 185
K E+ L + H N++ L+ LE N + + + L N + Q
Sbjct: 71 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 127
Query: 186 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 245
L+ + +GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 128 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TD 183
Query: 246 DRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQS 304
D T + T Y APE + ++ D++S G ++ ELL+GR T
Sbjct: 184 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD------ 234
Query: 305 LVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 353
++ + + R++ T G + +K + +A +Q L PK+
Sbjct: 235 -------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQMPKM 275
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 108/248 (43%), Gaps = 43/248 (17%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFV---YKGWIDQHSLSPAKPGSGMVVAVKKL-KPEG 128
TF LK +N +P +G G G V Y +D++ VA+KKL +P
Sbjct: 19 TFTVLKR-YQNLKP---IGSGAQGIVCAAYDAVLDRN------------VAIKKLSRPFQ 62
Query: 129 FQGH-KEWLTEVNYLGQLHHPNLVKLIGYCL------EGENRLLVYEFMPKGSLENHLFR 181
Q H K E+ + ++H N++ L+ E ++ LV E M +
Sbjct: 63 NQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME 122
Query: 182 RGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKA 241
+ +S+ + + G+ LH A +I+RD K SNI++ ++ K+ DFGLA+
Sbjct: 123 LDHERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDXTLKILDFGLART 175
Query: 242 GPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLE------LLSGRCAVD 295
T + + T + T Y APE + D++S G ++ E L GR +D
Sbjct: 176 AGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 232
Query: 296 KTKVGIEQ 303
+ IEQ
Sbjct: 233 QWNKVIEQ 240
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 124/289 (42%), Gaps = 44/289 (15%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KP-EGFQ 130
T E+ +N P +G G +G V + +G+ VAVKKL +P +
Sbjct: 27 TIWEVPERYQNLSP---VGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSII 74
Query: 131 GHKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFMPKGSLENHLFRRGPQ 185
K E+ L + H N++ L+ LE N + + + L N + Q
Sbjct: 75 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 131
Query: 186 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 245
L+ + +GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 132 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLARH--TD 187
Query: 246 DRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQS 304
D T + T Y APE + ++ D++S G ++ ELL+GR T
Sbjct: 188 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD------ 238
Query: 305 LVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 353
++ + + R++ T G + +K + +A +Q L PK+
Sbjct: 239 -------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQMPKM 279
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 75/159 (47%), Gaps = 17/159 (10%)
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 191
L E L ++ P LVKL + N +V E++ G + +HL R G P +A
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
++ LTF + +IYRD K N+++D + +++DFG AK RT
Sbjct: 149 QIV--------LTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKR--VKGRT--- 195
Query: 252 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 196 WXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 124/289 (42%), Gaps = 44/289 (15%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KP-EGFQ 130
T E+ +N P +G G +G V + +G+ VAVKKL +P +
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSII 63
Query: 131 GHKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFMPKGSLENHLFRRGPQ 185
K E+ L + H N++ L+ LE N + + + L N + Q
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 120
Query: 186 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 245
L+ + +GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TD 176
Query: 246 DRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQS 304
D T + T Y APE + ++ D++S G ++ ELL+GR T
Sbjct: 177 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD------ 227
Query: 305 LVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 353
++ + + R++ T G + +K + +A +Q L PK+
Sbjct: 228 -------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQMPKM 268
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 108/248 (43%), Gaps = 43/248 (17%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFV---YKGWIDQHSLSPAKPGSGMVVAVKKL-KPEG 128
TF LK +N +P +G G G V Y +D++ VA+KKL +P
Sbjct: 57 TFTVLKR-YQNLKP---IGSGAQGIVCAAYDAVLDRN------------VAIKKLSRPFQ 100
Query: 129 FQGH-KEWLTEVNYLGQLHHPNLVKLIGYCL------EGENRLLVYEFMPKGSLENHLFR 181
Q H K E+ + ++H N++ L+ E ++ LV E M +
Sbjct: 101 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME 160
Query: 182 RGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKA 241
+ +S+ + + G+ LH A +I+RD K SNI++ ++ K+ DFGLA+
Sbjct: 161 LDHERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLART 213
Query: 242 GPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLE------LLSGRCAVD 295
T + + T + T Y APE + D++S G ++ E L GR +D
Sbjct: 214 AGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 270
Query: 296 KTKVGIEQ 303
+ IEQ
Sbjct: 271 QWNKVIEQ 278
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 108/248 (43%), Gaps = 43/248 (17%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFV---YKGWIDQHSLSPAKPGSGMVVAVKKL-KPEG 128
TF LK +N +P +G G G V Y +D++ VA+KKL +P
Sbjct: 20 TFTVLKR-YQNLKP---IGSGAQGIVCAAYDAVLDRN------------VAIKKLSRPFQ 63
Query: 129 FQGH-KEWLTEVNYLGQLHHPNLVKLIGYCL------EGENRLLVYEFMPKGSLENHLFR 181
Q H K E+ + ++H N++ L+ E ++ LV E M +
Sbjct: 64 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME 123
Query: 182 RGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKA 241
+ +S+ + + G+ LH A +I+RD K SNI++ ++ K+ DFGLA+
Sbjct: 124 LDHERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLART 176
Query: 242 GPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLE------LLSGRCAVD 295
T + + T + T Y APE + D++S G ++ E L GR +D
Sbjct: 177 AGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 233
Query: 296 KTKVGIEQ 303
+ IEQ
Sbjct: 234 QWNKVIEQ 241
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 95/209 (45%), Gaps = 12/209 (5%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLT-EVNY 141
+F+ +LGEG F V + L+ ++ + ++ + + E ++T E +
Sbjct: 30 DFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKEN---KVPYVTRERDV 82
Query: 142 LGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAK 201
+ +L HP VKL + E + G L ++ + G + I +A
Sbjct: 83 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA- 141
Query: 202 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 261
L +LH +I+RD K NILL+ + + +++DFG AK + + +GT Y
Sbjct: 142 -LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 198
Query: 262 APEYVATGRLTTKSDVYSFGVVLLELLSG 290
+PE + SD+++ G ++ +L++G
Sbjct: 199 SPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 124/289 (42%), Gaps = 44/289 (15%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KP-EGFQ 130
T E+ +N P +G G +G V + +G+ VAVKKL +P +
Sbjct: 21 TIWEVPERYQNLSP---VGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSII 68
Query: 131 GHKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFMPKGSLENHLFRRGPQ 185
K E+ L + H N++ L+ LE N + + + L N + Q
Sbjct: 69 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 125
Query: 186 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 245
L+ + +GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 126 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TD 181
Query: 246 DRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQS 304
D T + T Y APE + ++ D++S G ++ ELL+GR T
Sbjct: 182 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD------ 232
Query: 305 LVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 353
++ + + R++ T G + +K + +A +Q L PK+
Sbjct: 233 -------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQMPKM 273
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 124/289 (42%), Gaps = 44/289 (15%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KP-EGFQ 130
T E+ +N P +G G +G V + +G+ VAVKKL +P +
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSII 63
Query: 131 GHKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFMPKGSLENHLFRRGPQ 185
K E+ L + H N++ L+ LE N + + + L N + Q
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 120
Query: 186 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 245
L+ + +GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TD 176
Query: 246 DRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQS 304
D T + T Y APE + ++ D++S G ++ ELL+GR T
Sbjct: 177 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD------ 227
Query: 305 LVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 353
++ + + R++ T G + +K + +A +Q L PK+
Sbjct: 228 -------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQMPKM 268
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 74/158 (46%), Gaps = 9/158 (5%)
Query: 138 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSW--AVRMKV 195
E + L HP++V+L+ +V+EFM L + +R + AV
Sbjct: 76 EASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHY 135
Query: 196 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNA---KLSDFGLAKAGPTGDRTHVST 252
+ L + HD + +I+RD K N+LL ++ N+ KL DFG+A G+ V+
Sbjct: 136 MRQILEALRYCHD--NNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQ--LGESGLVAG 191
Query: 253 QVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+GT + APE V DV+ GV+L LLSG
Sbjct: 192 GRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 124/289 (42%), Gaps = 44/289 (15%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KP-EGFQ 130
T E+ +N P +G G +G V + +G+ VAVKKL +P +
Sbjct: 22 TIWEVPERYQNLSP---VGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSII 69
Query: 131 GHKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFMPKGSLENHLFRRGPQ 185
K E+ L + H N++ L+ LE N + + + L N + Q
Sbjct: 70 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 126
Query: 186 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 245
L+ + +GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 127 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDSELKILDFGLARH--TD 182
Query: 246 DRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQS 304
D T + T Y APE + ++ D++S G ++ ELL+GR T
Sbjct: 183 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD------ 233
Query: 305 LVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 353
++ + + R++ T G + +K + +A +Q L PK+
Sbjct: 234 -------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQMPKM 274
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 124/289 (42%), Gaps = 44/289 (15%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KP-EGFQ 130
T E+ +N P +G G +G V + +G+ VAVKKL +P +
Sbjct: 14 TIWEVPERYQNLSP---VGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSII 61
Query: 131 GHKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFMPKGSLENHLFRRGPQ 185
K E+ L + H N++ L+ LE N + + + L N + Q
Sbjct: 62 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 118
Query: 186 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 245
L+ + +GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 119 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TD 174
Query: 246 DRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQS 304
D T + T Y APE + ++ D++S G ++ ELL+GR T
Sbjct: 175 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD------ 225
Query: 305 LVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 353
++ + + R++ T G + +K + +A +Q L PK+
Sbjct: 226 -------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQMPKM 266
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 85/160 (53%), Gaps = 12/160 (7%)
Query: 138 EVNYLGQLHHPNLVKLIGYCLE-GENRL-LVYEFMPKGSLENHLFRRGPQPLSWAVRMKV 195
E+ L +L HPN+VKL+ + E+ L +V+E + +G + + +PLS
Sbjct: 86 EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPV---MEVPTLKPLSEDQARFY 142
Query: 196 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVM 255
KG+ +LH ++I+RD K SN+L+ + + K++DFG++ D +T +
Sbjct: 143 FQDLIKGIEYLH--YQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNT--V 198
Query: 256 GTHGYAAPEYVATGR--LTTKS-DVYSFGVVLLELLSGRC 292
GT + APE ++ R + K+ DV++ GV L + G+C
Sbjct: 199 GTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQC 238
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 108/248 (43%), Gaps = 43/248 (17%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFV---YKGWIDQHSLSPAKPGSGMVVAVKKL-KPEG 128
TF LK +N +P +G G G V Y +D++ VA+KKL +P
Sbjct: 19 TFTVLKRY-QNLKP---IGSGAQGIVCAAYDAVLDRN------------VAIKKLSRPFQ 62
Query: 129 FQGH-KEWLTEVNYLGQLHHPNLVKLIGYCL------EGENRLLVYEFMPKGSLENHLFR 181
Q H K E+ + ++H N++ L+ E ++ LV E M +
Sbjct: 63 NQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME 122
Query: 182 RGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKA 241
+ +S+ + + G+ LH A +I+RD K SNI++ ++ K+ DFGLA+
Sbjct: 123 LDHERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDXTLKILDFGLART 175
Query: 242 GPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLE------LLSGRCAVD 295
T + + T + T Y APE + D++S G ++ E L GR +D
Sbjct: 176 AGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 232
Query: 296 KTKVGIEQ 303
+ IEQ
Sbjct: 233 QWNKVIEQ 240
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 108/248 (43%), Gaps = 43/248 (17%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFV---YKGWIDQHSLSPAKPGSGMVVAVKKL-KPEG 128
TF LK +N +P +G G G V Y +D++ VA+KKL +P
Sbjct: 12 TFTVLKR-YQNLKP---IGSGAQGIVCAAYDAVLDRN------------VAIKKLSRPFQ 55
Query: 129 FQGH-KEWLTEVNYLGQLHHPNLVKLIGYCL------EGENRLLVYEFMPKGSLENHLFR 181
Q H K E+ + ++H N++ L+ E ++ LV E M +
Sbjct: 56 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME 115
Query: 182 RGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKA 241
+ +S+ + + G+ LH A +I+RD K SNI++ ++ K+ DFGLA+
Sbjct: 116 LDHERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLART 168
Query: 242 GPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLE------LLSGRCAVD 295
T + + T + T Y APE + D++S G ++ E L GR +D
Sbjct: 169 AGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 225
Query: 296 KTKVGIEQ 303
+ IEQ
Sbjct: 226 QWNKVIEQ 233
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 108/248 (43%), Gaps = 43/248 (17%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFV---YKGWIDQHSLSPAKPGSGMVVAVKKL-KPEG 128
TF LK +N +P +G G G V Y +D++ VA+KKL +P
Sbjct: 13 TFTVLKR-YQNLKP---IGSGAQGIVCAAYDAVLDRN------------VAIKKLSRPFQ 56
Query: 129 FQGH-KEWLTEVNYLGQLHHPNLVKLIGYCL------EGENRLLVYEFMPKGSLENHLFR 181
Q H K E+ + ++H N++ L+ E ++ LV E M +
Sbjct: 57 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME 116
Query: 182 RGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKA 241
+ +S+ + + G+ LH A +I+RD K SNI++ ++ K+ DFGLA+
Sbjct: 117 LDHERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLART 169
Query: 242 GPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLE------LLSGRCAVD 295
T + + T + T Y APE + D++S G ++ E L GR +D
Sbjct: 170 AGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 226
Query: 296 KTKVGIEQ 303
+ IEQ
Sbjct: 227 QWNKVIEQ 234
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 124/289 (42%), Gaps = 44/289 (15%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KP-EGFQ 130
T E+ +N P +G G +G V + +G+ VAVKKL +P +
Sbjct: 12 TIWEVPERYQNLSP---VGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSII 59
Query: 131 GHKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFMPKGSLENHLFRRGPQ 185
K E+ L + H N++ L+ LE N + + + L N + Q
Sbjct: 60 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 116
Query: 186 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 245
L+ + +GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 117 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TD 172
Query: 246 DRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQS 304
D T + T Y APE + ++ D++S G ++ ELL+GR T
Sbjct: 173 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD------ 223
Query: 305 LVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 353
++ + + R++ T G + +K + +A +Q L PK+
Sbjct: 224 -------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQMPKM 264
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 124/289 (42%), Gaps = 44/289 (15%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KP-EGFQ 130
T E+ +N P +G G +G V + +G+ VAVKKL +P +
Sbjct: 18 TIWEVPERYQNLSP---VGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSII 65
Query: 131 GHKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFMPKGSLENHLFRRGPQ 185
K E+ L + H N++ L+ LE N + + + L N + Q
Sbjct: 66 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 122
Query: 186 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 245
L+ + +GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 123 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDSELKILDFGLARH--TD 178
Query: 246 DRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQS 304
D T + T Y APE + ++ D++S G ++ ELL+GR T
Sbjct: 179 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD------ 229
Query: 305 LVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 353
++ + + R++ T G + +K + +A +Q L PK+
Sbjct: 230 -------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQMPKM 270
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 108/248 (43%), Gaps = 43/248 (17%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFV---YKGWIDQHSLSPAKPGSGMVVAVKKL-KPEG 128
TF LK +N +P +G G G V Y +D++ VA+KKL +P
Sbjct: 13 TFTVLKR-YQNLKP---IGSGAQGIVCAAYDAVLDRN------------VAIKKLSRPFQ 56
Query: 129 FQGH-KEWLTEVNYLGQLHHPNLVKLIGYCL------EGENRLLVYEFMPKGSLENHLFR 181
Q H K E+ + ++H N++ L+ E ++ LV E M +
Sbjct: 57 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME 116
Query: 182 RGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKA 241
+ +S+ + + G+ LH A +I+RD K SNI++ ++ K+ DFGLA+
Sbjct: 117 LDHERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLART 169
Query: 242 GPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLE------LLSGRCAVD 295
T + + T + T Y APE + D++S G ++ E L GR +D
Sbjct: 170 AGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 226
Query: 296 KTKVGIEQ 303
+ IEQ
Sbjct: 227 QWNKVIEQ 234
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 124/289 (42%), Gaps = 44/289 (15%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KP-EGFQ 130
T E+ +N P +G G +G V + +G+ VAVKKL +P +
Sbjct: 13 TIWEVPERYQNLSP---VGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSII 60
Query: 131 GHKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFMPKGSLENHLFRRGPQ 185
K E+ L + H N++ L+ LE N + + + L N + Q
Sbjct: 61 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 117
Query: 186 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 245
L+ + +GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 118 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TD 173
Query: 246 DRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQS 304
D T + T Y APE + ++ D++S G ++ ELL+GR T
Sbjct: 174 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD------ 224
Query: 305 LVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 353
++ + + R++ T G + +K + +A +Q L PK+
Sbjct: 225 -------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQMPKM 265
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 95/224 (42%), Gaps = 31/224 (13%)
Query: 90 LGEGGFGFV--YKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHH 147
LGEGGF +V +G D H A+K++ Q +E E + +H
Sbjct: 37 LGEGGFSYVDLVEGLHDGH-----------FYALKRILCHEQQDREEAQREADMHRLFNH 85
Query: 148 PNLVKLIGYCLE----GENRLLVYEFMPKGSLENHLFRRGPQP--LSWAVRMKVAIGAAK 201
PN+++L+ YCL L+ F +G+L N + R + L+ + + +G +
Sbjct: 86 PNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICR 145
Query: 202 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFG---LAKAGPTGDRTHVSTQVMG-- 256
GL +H +RD K +NILL E L D G A G R ++ Q
Sbjct: 146 GLEAIH--AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQ 203
Query: 257 --THGYAAPEYVATGR---LTTKSDVYSFGVVLLELLSGRCAVD 295
T Y APE + + ++DV+S G VL ++ G D
Sbjct: 204 RCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYD 247
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 102/229 (44%), Gaps = 40/229 (17%)
Query: 76 ELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KPEGFQGH-- 132
E++ R+ +P +G G +G V S +G VA+KKL +P FQ
Sbjct: 22 EVRAVYRDLQP---VGSGAYGAV---------CSAVDGRTGAKVAIKKLYRP--FQSELF 67
Query: 133 -KEWLTEVNYLGQLHHPNLVKLIGYCLEGE------NRLLVYEFMPK--GSLENHLFRRG 183
K E+ L + H N++ L+ E + LV FM G L H + G
Sbjct: 68 AKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHE-KLG 126
Query: 184 PQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGP 243
+ + V + KGL ++H A +I+RD K N+ ++ + K+ DFGLA+
Sbjct: 127 EDRIQFLVYQML-----KGLRYIHAA--GIIHRDLKPGNLAVNEDCELKILDFGLARQAD 179
Query: 244 TGDRTHVSTQVMGTHGYAAPEYVATG-RLTTKSDVYSFGVVLLELLSGR 291
+ V T+ Y APE + R T D++S G ++ E+++G+
Sbjct: 180 SEMXGXVVTR-----WYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 108/248 (43%), Gaps = 43/248 (17%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFV---YKGWIDQHSLSPAKPGSGMVVAVKKL-KPEG 128
TF LK +N +P +G G G V Y +D++ VA+KKL +P
Sbjct: 19 TFTVLKR-YQNLKP---IGSGAQGIVCAAYDAVLDRN------------VAIKKLSRPFQ 62
Query: 129 FQGH-KEWLTEVNYLGQLHHPNLVKLIGYCL------EGENRLLVYEFMPKGSLENHLFR 181
Q H K E+ + ++H N++ L+ E ++ LV E M +
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME 122
Query: 182 RGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKA 241
+ +S+ + + G+ LH A +I+RD K SNI++ ++ K+ DFGLA+
Sbjct: 123 LDHERMSYLLYQMLX-----GIKHLHSA--GIIHRDLKPSNIVVKSDXTLKILDFGLART 175
Query: 242 GPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLE------LLSGRCAVD 295
T + + T + T Y APE + D++S G ++ E L GR +D
Sbjct: 176 AGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 232
Query: 296 KTKVGIEQ 303
+ IEQ
Sbjct: 233 QWNKVIEQ 240
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 75/159 (47%), Gaps = 17/159 (10%)
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 191
L E L ++ P LVKL + N +V E++ G + +HL R G P +A
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
++ LTF + +IYRD K N+L+D + +++DFG AK RT
Sbjct: 149 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT--- 195
Query: 252 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+ GT Y APE + + D ++ GV++ ++ +G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 123/289 (42%), Gaps = 44/289 (15%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KP-EGFQ 130
T E+ +N P +G G +G V + +G+ VAVKKL +P +
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSII 63
Query: 131 GHKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFMPKGSLENHLFRRGPQ 185
K E+ L + H N++ L+ LE N + + + L N + Q
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KSQ 120
Query: 186 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 245
L+ + +GL ++H A+ +I+RD K SN+ ++ + K+ DFGL + T
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDSELKILDFGLCRH--TD 176
Query: 246 DRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQS 304
D T + T Y APE + ++ D++S G ++ ELL+GR T
Sbjct: 177 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD------ 227
Query: 305 LVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 353
++ + + R++ T G + +K + +A +Q L PK+
Sbjct: 228 -------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQMPKM 268
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 108/248 (43%), Gaps = 43/248 (17%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFV---YKGWIDQHSLSPAKPGSGMVVAVKKL-KPEG 128
TF LK +N +P +G G G V Y +D++ VA+KKL +P
Sbjct: 12 TFTVLKR-YQNLKP---IGSGAQGIVCAAYDAVLDRN------------VAIKKLSRPFQ 55
Query: 129 FQGH-KEWLTEVNYLGQLHHPNLVKLIGYCL------EGENRLLVYEFMPKGSLENHLFR 181
Q H K E+ + ++H N++ L+ E ++ LV E M +
Sbjct: 56 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME 115
Query: 182 RGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKA 241
+ +S+ + + G+ LH A +I+RD K SNI++ ++ K+ DFGLA+
Sbjct: 116 LDHERMSYLLYQMLX-----GIKHLHSA--GIIHRDLKPSNIVVKSDXTLKILDFGLART 168
Query: 242 GPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLE------LLSGRCAVD 295
T + + T + T Y APE + D++S G ++ E L GR +D
Sbjct: 169 AGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 225
Query: 296 KTKVGIEQ 303
+ IEQ
Sbjct: 226 QWNKVIEQ 233
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 124/292 (42%), Gaps = 50/292 (17%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KP-EGFQ 130
T E+ +N P +G G +G V + +G+ VAVKKL +P +
Sbjct: 39 TIWEVPERYQNLSP---VGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSII 86
Query: 131 GHKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFMPKGSLENHLFRRGPQ 185
K E+ L + H N++ L+ LE N + + + L N + Q
Sbjct: 87 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 143
Query: 186 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 245
L+ + +GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+
Sbjct: 144 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR----- 196
Query: 246 DRTHVSTQVMG---THGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGI 301
H ++ G T Y APE + ++ D++S G ++ ELL+GR T
Sbjct: 197 ---HTDDEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD--- 250
Query: 302 EQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 353
++ + + R++ T G + +K + +A +Q L PK+
Sbjct: 251 ----------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQMPKM 291
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 124/289 (42%), Gaps = 44/289 (15%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KP-EGFQ 130
T E+ +N P +G G +G V + +G+ VAVKKL +P +
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSII 63
Query: 131 GHKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFMPKGSLENHLFRRGPQ 185
K E+ L + H N++ L+ LE N + + + L N + Q
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 120
Query: 186 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 245
L+ + +GL ++H A+ +I+RD K SN+ ++ + K+ D+GLA+ T
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDYGLARH--TD 176
Query: 246 DRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQS 304
D T + T Y APE + ++ D++S G ++ ELL+GR T
Sbjct: 177 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD------ 227
Query: 305 LVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 353
++ + + R++ T G + +K + +A +Q L PK+
Sbjct: 228 -------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQMPKM 268
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 101/227 (44%), Gaps = 30/227 (13%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KP-EGFQ 130
T E+ +N P +G G +G V + +G VAVKKL +P +
Sbjct: 22 TIWEVPERYQNLSP---VGSGAYGSVCAAF---------DTKTGHRVAVKKLSRPFQSII 69
Query: 131 GHKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFMPKGSLENHLFRRGPQ 185
K E+ L + H N++ L+ LE N + + + L N + Q
Sbjct: 70 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 126
Query: 186 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 245
L+ + +GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 127 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TD 182
Query: 246 DRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 291
D T + T Y APE + ++ D++S G ++ ELL+GR
Sbjct: 183 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 101/227 (44%), Gaps = 30/227 (13%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KP-EGFQ 130
T E+ +N P +G G +G V + +G VAVKKL +P +
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSVCAAF---------DTKTGHRVAVKKLSRPFQSII 63
Query: 131 GHKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFMPKGSLENHLFRRGPQ 185
K E+ L + H N++ L+ LE N + + + L N + Q
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 120
Query: 186 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 245
L+ + +GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TD 176
Query: 246 DRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 291
D T + T Y APE + ++ D++S G ++ ELL+GR
Sbjct: 177 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 103/241 (42%), Gaps = 57/241 (23%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKE-----WLT 137
+F ++LG+G FG V K +++L A+KK++ H E L+
Sbjct: 7 DFEEIAVLGQGAFGQVVKA---RNALDSR------YYAIKKIR------HTEEKLSTILS 51
Query: 138 EVNYLGQLHHPNLVKLIGYCLEGEN-------------RLLVYEFMPKGSLENHLFRRG- 183
EV L L+H +V+ LE N + E+ G+L + +
Sbjct: 52 EVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENL 111
Query: 184 --PQPLSWAVRMKVAIGAAKGLTFLHDAESQ-VIYRDFKASNILLDAEFNAKLSDFGLAK 240
+ W + ++ + L+++H SQ +I+RD K NI +D N K+ DFGLAK
Sbjct: 112 NQQRDEYWRLFRQIL----EALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAK 164
Query: 241 -AGPTGDRTHVSTQ-----------VMGTHGYAAPEYV-ATGRLTTKSDVYSFGVVLLEL 287
+ D + +Q +GT Y A E + TG K D+YS G++ E+
Sbjct: 165 NVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM 224
Query: 288 L 288
+
Sbjct: 225 I 225
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 98/234 (41%), Gaps = 40/234 (17%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKP--EGFQGHKEWLTEVN 140
N+ L+G G +G+VY + + VA+KK+ E K L E+
Sbjct: 27 NYIIKHLIGRGSYGYVYLAY---------DKNTEKNVAIKKVNRMFEDLIDCKRILREIT 77
Query: 141 YLGQLHHPNLVKLIGYCLEGE----NRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA 196
L +L +++L + + + L + + L+ LF+ P L+ +
Sbjct: 78 ILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKK-LFK-TPIFLTEEHIKTIL 135
Query: 197 IGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV-- 254
G F+H ES +I+RD K +N LL+ + + K+ DFGLA+ + T++ +
Sbjct: 136 YNLLLGENFIH--ESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEE 193
Query: 255 ------------------MGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLS 289
+ T Y APE + TKS D++S G + ELL+
Sbjct: 194 NEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLN 247
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 101/227 (44%), Gaps = 30/227 (13%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KP-EGFQ 130
T E+ +N P +G G +G V + +G VAVKKL +P +
Sbjct: 35 TIWEVPERYQNLSP---VGSGAYGSVCAAF---------DTKTGHRVAVKKLSRPFQSII 82
Query: 131 GHKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFMPKGSLENHLFRRGPQ 185
K E+ L + H N++ L+ LE N + + + L N + Q
Sbjct: 83 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 139
Query: 186 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 245
L+ + +GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 140 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TD 195
Query: 246 DRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 291
D T + T Y APE + ++ D++S G ++ ELL+GR
Sbjct: 196 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 101/227 (44%), Gaps = 30/227 (13%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KP-EGFQ 130
T E+ +N P +G G +G V + +G VAVKKL +P +
Sbjct: 36 TIWEVPERYQNLSP---VGSGAYGSVCAAF---------DTKTGHRVAVKKLSRPFQSII 83
Query: 131 GHKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFMPKGSLENHLFRRGPQ 185
K E+ L + H N++ L+ LE N + + + L N + Q
Sbjct: 84 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 140
Query: 186 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 245
L+ + +GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 141 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TD 196
Query: 246 DRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 291
D T + T Y APE + ++ D++S G ++ ELL+GR
Sbjct: 197 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 101/227 (44%), Gaps = 30/227 (13%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KP-EGFQ 130
T E+ +N P +G G +G V + +G VAVKKL +P +
Sbjct: 26 TIWEVPERYQNLAP---VGSGAYGSVCAAF---------DTKTGHRVAVKKLSRPFQSII 73
Query: 131 GHKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFMPKGSLENHLFRRGPQ 185
K E+ L + H N++ L+ LE N + + + L N + Q
Sbjct: 74 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 130
Query: 186 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 245
L+ + +GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 131 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TD 186
Query: 246 DRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 291
D T + T Y APE + ++ D++S G ++ ELL+GR
Sbjct: 187 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 70/161 (43%), Gaps = 18/161 (11%)
Query: 138 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWA----VRM 193
E + + + P +V+L + + +V E+MP G L N L P WA +
Sbjct: 125 ERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVN-LMSNYDVPEKWAKFYTAEV 183
Query: 194 KVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 253
+A+ A + +H RD K N+LLD + KL+DFG H T
Sbjct: 184 VLALDAIHSMGLIH--------RDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTA 235
Query: 254 VMGTHGYAAPEYVAT----GRLTTKSDVYSFGVVLLELLSG 290
V GT Y +PE + + G + D +S GV L E+L G
Sbjct: 236 V-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 275
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 101/227 (44%), Gaps = 30/227 (13%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KP-EGFQ 130
T E+ +N P +G G +G V + +G VAVKKL +P +
Sbjct: 12 TIWEVPERYQNLSP---VGSGAYGSVCAAF---------DTKTGHRVAVKKLSRPFQSII 59
Query: 131 GHKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFMPKGSLENHLFRRGPQ 185
K E+ L + H N++ L+ LE N + + + L N + Q
Sbjct: 60 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 116
Query: 186 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 245
L+ + +GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 117 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TD 172
Query: 246 DRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 291
D T + T Y APE + ++ D++S G ++ ELL+GR
Sbjct: 173 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 125/295 (42%), Gaps = 54/295 (18%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KPEGFQGH---KEWLTEVNYLGQL 145
+G G +G V ID+ S G VA+KKL +P FQ K E+ L +
Sbjct: 50 VGSGAYGSVCSA-IDKRS--------GEKVAIKKLSRP--FQSEIFAKRAYRELLLLKHM 98
Query: 146 HHPNLVKLIGYCLEGENRLLVYEF---MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKG 202
H N++ L+ + Y+F MP ++ L + S + KG
Sbjct: 99 QHENVIGLLDVFTPASSLRNFYDFYLVMP--FMQTDLQKIMGMEFSEEKIQYLVYQMLKG 156
Query: 203 LTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMG---THG 259
L ++H A V++RD K N+ ++ + K+ DFGLA+ H ++ G T
Sbjct: 157 LKYIHSA--GVVHRDLKPGNLAVNEDCELKILDFGLAR--------HADAEMTGYVVTRW 206
Query: 260 YAAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRK 318
Y APE + + ++ D++S G ++ E+L+G+ K YL +
Sbjct: 207 YRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFK-------------GKDYLDQLTQ 253
Query: 319 LFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPK-----LRPRMS-EVLAILERL 367
+ ++ G ++ QK AA +Q L P+ L PR S + +LE++
Sbjct: 254 ILKVTGVP-GTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKM 307
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 70/151 (46%), Gaps = 15/151 (9%)
Query: 147 HPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRR---GPQPLSWAVRMKVAIGAAKGL 203
HPN+VKL + + LV E + G L + ++ S+ +R V+ +
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVS-----AV 119
Query: 204 TFLHDAESQVIYRDFKASNILLDAE---FNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 260
+ +HD V++RD K N+L E K+ DFG A+ P D + T H Y
Sbjct: 120 SHMHDV--GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPP-DNQPLKTPCFTLH-Y 175
Query: 261 AAPEYVATGRLTTKSDVYSFGVVLLELLSGR 291
AAPE + D++S GV+L +LSG+
Sbjct: 176 AAPELLNQNGYDESCDLWSLGVILYTMLSGQ 206
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 74/159 (46%), Gaps = 17/159 (10%)
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 191
L E L ++ P LVKL + N +V E++ G + +HL R G P +A
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
++ LTF + +IYRD K N+L+D + +++DFG AK RT
Sbjct: 149 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT--- 195
Query: 252 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+ GT Y AP + + D ++ GV++ E+ +G
Sbjct: 196 WXLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 90/213 (42%), Gaps = 17/213 (7%)
Query: 81 TRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVN 140
+ N+ LG+G F V + L A ++ KKL FQ + E
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFA----AKIINTKKLSARDFQKLER---EAR 57
Query: 141 YLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAA 200
+L HPN+V+L E LV++ + G L + R + S A
Sbjct: 58 ICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR--EFYSEADASHCIQQIL 115
Query: 201 KGLTFLHDAESQVIYRDFKASNILLDAEFN---AKLSDFGLAKAGPTGDRTHVSTQVMGT 257
+ + + H + +++R+ K N+LL ++ KL+DFGLA + H GT
Sbjct: 116 ESIAYCH--SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGT 170
Query: 258 HGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
GY +PE + + D+++ GV+L LL G
Sbjct: 171 PGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 92/203 (45%), Gaps = 22/203 (10%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLK----PEGFQGHKEWLTEVNYLGQL 145
+GEG +G V+K + +VA+K+++ EG L E+ L +L
Sbjct: 10 IGEGTYGTVFKA---------KNRETHEIVALKRVRLDDDDEGVPSSA--LREICLLKEL 58
Query: 146 HHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTF 205
H N+V+L + LV+EF + L+ + F L + KGL F
Sbjct: 59 KHKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKY-FDSCNGDLDPEIVKSFLFQLLKGLGF 116
Query: 206 LHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEY 265
H V++RD K N+L++ KL++FGLA+A R + + V T Y P+
Sbjct: 117 CH--SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV--TLWYRPPDV 172
Query: 266 VATGRL-TTKSDVYSFGVVLLEL 287
+ +L +T D++S G + EL
Sbjct: 173 LFGAKLYSTSIDMWSAGCIFAEL 195
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 101/230 (43%), Gaps = 36/230 (15%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KP-EGFQ 130
T E+ +N P +G G +G V + +G VAVKKL +P +
Sbjct: 36 TIWEVPERYQNLSP---VGSGAYGSVCAAF---------DTKTGHRVAVKKLSRPFQSII 83
Query: 131 GHKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFMPKGSLENHLFRRGPQ 185
K E+ L + H N++ L+ LE N + + + L N + Q
Sbjct: 84 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 140
Query: 186 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 245
L+ + +GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+
Sbjct: 141 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR----- 193
Query: 246 DRTHVSTQVMG---THGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 291
H ++ G T Y APE + ++ D++S G ++ ELL+GR
Sbjct: 194 ---HTDDEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 90/213 (42%), Gaps = 17/213 (7%)
Query: 81 TRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVN 140
+ N+ LG+G F V + L A ++ KKL FQ + E
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFA----AKIINTKKLSARDFQKLER---EAR 56
Query: 141 YLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAA 200
+L HPN+V+L E LV++ + G L + R + S A
Sbjct: 57 ICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR--EFYSEADASHCIQQIL 114
Query: 201 KGLTFLHDAESQVIYRDFKASNILLDAEFN---AKLSDFGLAKAGPTGDRTHVSTQVMGT 257
+ + + H + +++R+ K N+LL ++ KL+DFGLA + H GT
Sbjct: 115 ESIAYCH--SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGT 169
Query: 258 HGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
GY +PE + + D+++ GV+L LL G
Sbjct: 170 PGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 123/292 (42%), Gaps = 50/292 (17%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KP-EGFQ 130
T E+ +N P +G G +G V + +G VAVKKL +P +
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSVCAAF---------DTKTGHRVAVKKLSRPFQSII 63
Query: 131 GHKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFMPKGSLENHLFRRGPQ 185
K E+ L + H N++ L+ LE N + + + L N + Q
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 120
Query: 186 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 245
L+ + +GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR----- 173
Query: 246 DRTHVSTQVMG---THGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGI 301
H ++ G T Y APE + ++ D++S G ++ ELL+GR T
Sbjct: 174 ---HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD--- 227
Query: 302 EQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 353
++ + + R++ T G + +K + +A +Q L PK+
Sbjct: 228 ----------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQMPKM 268
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 80/175 (45%), Gaps = 7/175 (4%)
Query: 138 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKG-SLENHLFRRGPQPLSWAVRMKVA 196
E G+L P++V + + E + +L V + G L L R+GP AV +
Sbjct: 84 EARTAGRLQEPHVVPIHDFG-EIDGQLYVDXRLINGVDLAAXLRRQGPLAPPRAVAIVRQ 142
Query: 197 IGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMG 256
IG+A + +RD K NIL+ A+ A L DFG+A A T + V G
Sbjct: 143 IGSALDAA----HAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTV-G 197
Query: 257 THGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKP 311
T Y APE + T ++D+Y+ VL E L+G ++ + + ++ A P
Sbjct: 198 TLYYXAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVXGAHINQAIP 252
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 90/213 (42%), Gaps = 17/213 (7%)
Query: 81 TRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVN 140
+ N+ LG+G F V + L A ++ KKL FQ + E
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFA----AKIINTKKLSARDFQKLER---EAR 57
Query: 141 YLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAA 200
+L HPN+V+L E LV++ + G L + R + S A
Sbjct: 58 ICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR--EFYSEADASHCIQQIL 115
Query: 201 KGLTFLHDAESQVIYRDFKASNILLDAEFN---AKLSDFGLAKAGPTGDRTHVSTQVMGT 257
+ + + H + +++R+ K N+LL ++ KL+DFGLA + H GT
Sbjct: 116 ESIAYCH--SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGT 170
Query: 258 HGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
GY +PE + + D+++ GV+L LL G
Sbjct: 171 PGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 101/230 (43%), Gaps = 36/230 (15%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KP-EGFQ 130
T E+ +N P +G G +G V + +G VAVKKL +P +
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSVCAAF---------DTKTGHRVAVKKLSRPFQSII 63
Query: 131 GHKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFMPKGSLENHLFRRGPQ 185
K E+ L + H N++ L+ LE N + + + L N + Q
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 120
Query: 186 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 245
L+ + +GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR----- 173
Query: 246 DRTHVSTQVMG---THGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 291
H ++ G T Y APE + ++ D++S G ++ ELL+GR
Sbjct: 174 ---HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 99/238 (41%), Gaps = 22/238 (9%)
Query: 59 SEGEILSSSNLKAFTFNELKTATR---NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGS 115
S G L + NL F + T TR +++ LG+G F V + +P + +
Sbjct: 8 SSGVDLGTENL---YFQXMATCTRFTDDYQLFEELGKGAFSVVRRCV----KKTPTQEYA 60
Query: 116 GMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSL 175
++ KKL + H++ E L HPN+V+L E LV++ + G L
Sbjct: 61 AKIINTKKLSA---RDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGEL 117
Query: 176 ENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN---AK 232
+ R + A I + HD +++RD K N+LL ++ K
Sbjct: 118 FEDIVAREYYSEADASHCIHQILESVNHIHQHD----IVHRDLKPENLLLASKCKGAAVK 173
Query: 233 LSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
L+DFGLA + GT GY +PE + D+++ GV+L LL G
Sbjct: 174 LADFGLAIEVQGEQQAWFG--FAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 88/212 (41%), Gaps = 31/212 (14%)
Query: 103 IDQHSLSPAKPGSGMVVAVKKL--KPEGFQGHKEWLT------------------EVNYL 142
+D + + + GSG VKK K G Q +++ EV+ L
Sbjct: 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 68
Query: 143 GQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKG 202
++ HPN++ L + +L+ E + G L + L + A I G
Sbjct: 69 KEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--LNG 126
Query: 203 LTFLHDAESQVIYRDFKASNI-LLDAEF---NAKLSDFGLAKAGPTGDRTHVSTQVMGTH 258
+ +LH Q+ + D K NI LLD K+ DFGLA G+ + GT
Sbjct: 127 VYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTP 181
Query: 259 GYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+ APE V L ++D++S GV+ LLSG
Sbjct: 182 AFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 92/212 (43%), Gaps = 25/212 (11%)
Query: 84 FRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLG 143
F +S LG G VY+ + G+ A+K LK K TE+ L
Sbjct: 55 FEVESELGRGATSIVYRC---------KQKGTQKPYALKVLKKT--VDKKIVRTEIGVLL 103
Query: 144 QLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGL 203
+L HPN++KL LV E + G L + + +G A I + +
Sbjct: 104 RLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQI--LEAV 161
Query: 204 TFLHDAESQVIYRDFKASNILL-----DAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH 258
+LH E+ +++RD K N+L DA K++DFGL+K + + V GT
Sbjct: 162 AYLH--ENGIVHRDLKPENLLYATPAPDAPL--KIADFGLSK---IVEHQVLMKTVCGTP 214
Query: 259 GYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
GY APE + + D++S G++ LL G
Sbjct: 215 GYCAPEILRGCAYGPEVDMWSVGIITYILLCG 246
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 96/237 (40%), Gaps = 43/237 (18%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKP--EGFQGHKEWLTEVN 140
N+ L+G G +G+VY + + VA+KK+ E K L E+
Sbjct: 29 NYEIKHLIGRGSYGYVYLAY---------DKNANKNVAIKKVNRMFEDLIDCKRILREIT 79
Query: 141 YLGQLHHPNLVKLIGYCLEGE----NRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA 196
L +L +++L + + + L + + L+ LF+ P L+ +
Sbjct: 80 ILNRLKSDYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKK-LFK-TPIFLTEQHVKTIL 137
Query: 197 IGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV-- 254
G F+H ES +I+RD K +N LL+ + + K+ DFGLA+ + H+ +
Sbjct: 138 YNLLLGEKFIH--ESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEE 195
Query: 255 ---------------------MGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLS 289
+ T Y APE + T S D++S G + ELL+
Sbjct: 196 KEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLN 252
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 101/230 (43%), Gaps = 36/230 (15%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KP-EGFQ 130
T E+ +N P +G G +G V + +G VAVKKL +P +
Sbjct: 12 TIWEVPERYQNLSP---VGSGAYGSVCAAF---------DTKTGHRVAVKKLSRPFQSII 59
Query: 131 GHKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFMPKGSLENHLFRRGPQ 185
K E+ L + H N++ L+ LE N + + + L N + Q
Sbjct: 60 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 116
Query: 186 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 245
L+ + +GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+
Sbjct: 117 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR----- 169
Query: 246 DRTHVSTQVMG---THGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 291
H ++ G T Y APE + ++ D++S G ++ ELL+GR
Sbjct: 170 ---HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 123/289 (42%), Gaps = 44/289 (15%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KP-EGFQ 130
T E+ +N P +G G +G V + +G+ VAVKKL +P +
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSII 63
Query: 131 GHKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFMPKGSLENHLFRRGPQ 185
K E+ L + H N++ L+ LE N + + + L N + Q
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 120
Query: 186 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 245
L+ + +GL ++H A+ +I+RD K SN+ ++ + K+ FGLA+ T
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILGFGLARH--TD 176
Query: 246 DRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQS 304
D T + T Y APE + ++ D++S G ++ ELL+GR T
Sbjct: 177 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD------ 227
Query: 305 LVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 353
++ + + R++ T G + +K + +A +Q L PK+
Sbjct: 228 -------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQMPKM 268
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 102/234 (43%), Gaps = 40/234 (17%)
Query: 71 AFTFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KP-EG 128
A T E+ +N P +G G +G V + +G VAVKKL +P +
Sbjct: 10 AKTIWEVPERYQNLSP---VGSGAYGSVCAAF---------DTKTGHRVAVKKLSRPFQS 57
Query: 129 FQGHKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFMPKGSLEN-----H 178
K E+ L + H N++ L+ LE N + + + L N
Sbjct: 58 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAK 117
Query: 179 LFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGL 238
L Q L + + +GL ++H A+ +I+RD K SN+ ++ + K+ DFGL
Sbjct: 118 LTDDHVQFLIYQI--------LRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGL 167
Query: 239 AKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 291
A+ T D T + T Y APE + ++ D++S G ++ ELL+GR
Sbjct: 168 ARH--TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 126/318 (39%), Gaps = 59/318 (18%)
Query: 103 IDQHSLSPAKPGSGMVVAVKKL--KPEGFQGHKEWLT------------------EVNYL 142
+D + + + GSG VKK K G Q +++ EV+ L
Sbjct: 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 68
Query: 143 GQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKG 202
++ HPN++ L + +L+ E + G L + L + + L+ + G
Sbjct: 69 KEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNG 126
Query: 203 LTFLHDAESQVIYRDFKASNI-LLDAEF---NAKLSDFGLAKAGPTGDRTHVSTQVMGTH 258
+ +LH Q+ + D K NI LLD K+ DFGLA G+ + GT
Sbjct: 127 VYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTP 181
Query: 259 GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRK 318
+ APE V L ++D++S GV+ LLSG A P+L D ++
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ASPFLGDTKQ 223
Query: 319 --LFRI--MDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEAPKNSA 374
L + ++ + +Y + A + L +PK R + I + L+ P
Sbjct: 224 ETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKR------MTIQDSLQHPWIKP 277
Query: 375 KLSQSEPHRQTGPVTVRK 392
K +Q R+ V + K
Sbjct: 278 KDTQQALSRKASAVNMEK 295
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 90/211 (42%), Gaps = 26/211 (12%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHK------EWLTEVNYLG 143
LG G F V K + +G+ A K +K + + E EV+ L
Sbjct: 20 LGSGQFAIVKKC---------REKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILR 70
Query: 144 QLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGL 203
Q+ HPN++ L + +L+ E + G L + L ++ + LS G+
Sbjct: 71 QVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGV 128
Query: 204 TFLHDAESQVIYRDFKASNI-LLDAEF---NAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 259
+LH ++ + D K NI LLD + KL DFGLA G + GT
Sbjct: 129 NYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KNIFGTPE 183
Query: 260 YAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+ APE V L ++D++S GV+ LLSG
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 123/295 (41%), Gaps = 54/295 (18%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KPEGFQGH---KEWLTEVNYLGQL 145
+G G +G V S SG VA+KKL +P FQ K E+ L +
Sbjct: 32 VGSGAYGSV---------CSAIDKRSGEKVAIKKLSRP--FQSEIFAKRAYRELLLLKHM 80
Query: 146 HHPNLVKLIGYCLEGENRLLVYEF---MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKG 202
H N++ L+ + Y+F MP ++ L + S + KG
Sbjct: 81 QHENVIGLLDVFTPASSLRNFYDFYLVMP--FMQTDLQKIMGLKFSEEKIQYLVYQMLKG 138
Query: 203 LTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMG---THG 259
L ++H A V++RD K N+ ++ + K+ DFGLA+ H ++ G T
Sbjct: 139 LKYIHSA--GVVHRDLKPGNLAVNEDCELKILDFGLAR--------HADAEMTGYVVTRW 188
Query: 260 YAAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRK 318
Y APE + + ++ D++S G ++ E+L+G+ K YL +
Sbjct: 189 YRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFK-------------GKDYLDQLTQ 235
Query: 319 LFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPK-----LRPRMS-EVLAILERL 367
+ ++ G ++ QK AA +Q L P+ L PR S + +LE++
Sbjct: 236 ILKVTGVP-GTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKM 289
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 74/159 (46%), Gaps = 17/159 (10%)
Query: 136 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 191
L E L ++ P LVKL + N +V E++ G + +HL R G P +A
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
++ LTF + +IYRD K N+L+D + +++DFG AK RT
Sbjct: 149 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT--- 195
Query: 252 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+ GT APE + + D ++ GV++ E+ +G
Sbjct: 196 WXLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 91/212 (42%), Gaps = 31/212 (14%)
Query: 103 IDQHSLSPAKPGSGMVVAVKKL--KPEGFQGHKEWLT------------------EVNYL 142
+D + + + GSG+ VKK K G Q +++ EV+ L
Sbjct: 9 VDDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 68
Query: 143 GQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKG 202
++ HPN++ L + +L+ E + G L + L + + L+ + G
Sbjct: 69 KEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNG 126
Query: 203 LTFLHDAESQVIYRDFKASNI-LLDAEF---NAKLSDFGLAKAGPTGDRTHVSTQVMGTH 258
+ +LH Q+ + D K NI LLD K+ DFGLA G+ + GT
Sbjct: 127 VYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTP 181
Query: 259 GYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+ APE V L ++D++S GV+ LLSG
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 123/289 (42%), Gaps = 44/289 (15%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KP-EGFQ 130
T E+ +N P +G G +G V + +G+ VAVKKL +P +
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSII 63
Query: 131 GHKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFMPKGSLENHLFRRGPQ 185
K E+ L + H N++ L+ LE N + + + L N + Q
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 120
Query: 186 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 245
L+ + +GL ++H A+ +I+RD K SN+ ++ + K+ D GLA+ T
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDAGLARH--TD 176
Query: 246 DRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQS 304
D T + T Y APE + ++ D++S G ++ ELL+GR T
Sbjct: 177 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD------ 227
Query: 305 LVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 353
++ + + R++ T G + +K + +A +Q L PK+
Sbjct: 228 -------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQMPKM 268
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 70/171 (40%), Gaps = 21/171 (12%)
Query: 199 AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH 258
AKG+ FL A + I+RD A NILL + K+ DFGLA+
Sbjct: 207 VAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 264
Query: 259 GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPY--LSDK 316
+ APE + T +SDV+SFGV+L E+ S +G A PY +
Sbjct: 265 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------LG--------ASPYPGVKID 307
Query: 317 RKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 367
+ R + + P L C + EP RP SE++ L L
Sbjct: 308 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 358
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 70/171 (40%), Gaps = 21/171 (12%)
Query: 199 AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH 258
AKG+ FL A + I+RD A NILL + K+ DFGLA+
Sbjct: 209 VAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 266
Query: 259 GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPY--LSDK 316
+ APE + T +SDV+SFGV+L E+ S +G A PY +
Sbjct: 267 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------LG--------ASPYPGVKID 309
Query: 317 RKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 367
+ R + + P L C + EP RP SE++ L L
Sbjct: 310 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 360
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 90/205 (43%), Gaps = 21/205 (10%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWL-TEVNYLGQLHHP 148
LG G FG V H ++ G+ K + KE + E+ + L HP
Sbjct: 59 LGTGAFGVV-------HRVTERATGNNFAA---KFVMTPHESDKETVRKEIQTMSVLRHP 108
Query: 149 NLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHD 208
LV L + +++YEFM G L + + +S ++ KGL +H
Sbjct: 109 TLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK-MSEDEAVEYMRQVCKGLCHMH- 166
Query: 209 AESQVIYRDFKASNILLDAEFNA--KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYV 266
E+ ++ D K NI+ + + KL DFGL V+T GT +AAPE V
Sbjct: 167 -ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPE-V 221
Query: 267 ATGR-LTTKSDVYSFGVVLLELLSG 290
A G+ + +D++S GV+ LLSG
Sbjct: 222 AEGKPVGYYTDMWSVGVLSYILLSG 246
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 82/167 (49%), Gaps = 33/167 (19%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL----KPEGFQGHKEWLTEVNYLGQL 145
+G+G FG V+K +H +G VA+KK+ + EGF L E+ L L
Sbjct: 26 IGQGTFGEVFKA---RHR------KTGQKVALKKVLMENEKEGFPITA--LREIKILQLL 74
Query: 146 HHPNLVKLIGYCLEGE---NRL-----LVYEFMPK---GSLENHLFRRGPQPLSWAVRMK 194
H N+V LI C NR LV++F G L N L + + ++M
Sbjct: 75 KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQML 134
Query: 195 VAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKA 241
+ GL ++H +++++RD KA+N+L+ + KL+DFGLA+A
Sbjct: 135 L-----NGLYYIH--RNKILHRDMKAANVLITRDGVLKLADFGLARA 174
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 123/289 (42%), Gaps = 44/289 (15%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KP-EGFQ 130
T E+ +N P +G G +G V + +G+ VAVKKL +P +
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSII 63
Query: 131 GHKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFMPKGSLENHLFRRGPQ 185
K E+ L + H N++ L+ LE N + + + L N + Q
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 120
Query: 186 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 245
L+ + +GL ++H A+ +I+RD K SN+ ++ + K+ D GLA+ T
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDRGLARH--TD 176
Query: 246 DRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQS 304
D T + T Y APE + ++ D++S G ++ ELL+GR T
Sbjct: 177 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD------ 227
Query: 305 LVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 353
++ + + R++ T G + +K + +A +Q L PK+
Sbjct: 228 -------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQMPKM 268
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 84/191 (43%), Gaps = 37/191 (19%)
Query: 191 VRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHV 250
V + + I A+ + FLH +++RD K SNI + K+ DFGL A +
Sbjct: 165 VCLHIFIQIAEAVEFLHS--KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQT 222
Query: 251 STQVM----------GTHGYAAPEYVATGRLTTKSDVYSFGVVLLELL-SGRCAVDKTKV 299
M GT Y +PE + + K D++S G++L ELL S +++ ++
Sbjct: 223 VLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRI 282
Query: 300 GIEQSLVDWAKPYLSDKRKL-FRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMS 358
++D R L F ++ T+ +YPQ+ + L+ P RP +
Sbjct: 283 -------------ITDVRNLKFPLLFTQ---KYPQE-----HMMVQDMLSPSPTERPEAT 321
Query: 359 EVL--AILERL 367
+++ AI E L
Sbjct: 322 DIIENAIFENL 332
Score = 32.3 bits (72), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 14/80 (17%)
Query: 83 NFRPDSLLGEGGFGFVY--KGWIDQHSLSPAKPGSGMVVAVKKLK-PEGFQGHKEWLTEV 139
+F P +G GGFG V+ K +D + A+K+++ P ++ + EV
Sbjct: 7 DFEPIQCMGRGGFGVVFEAKNKVDDCNY-----------AIKRIRLPNRELAREKVMREV 55
Query: 140 NYLGQLHHPNLVKLIGYCLE 159
L +L HP +V+ LE
Sbjct: 56 KALAKLEHPGIVRYFNAWLE 75
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 98/220 (44%), Gaps = 28/220 (12%)
Query: 79 TATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLK----PEGFQGHKE 134
T+ +R + LGEG +G VYK ID + VA+K+++ EG G
Sbjct: 31 TSIDRYRRITKLGEGTYGEVYKA-IDT--------VTNETVAIKRIRLEHEEEGVPGTA- 80
Query: 135 WLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMK 194
+ EV+ L +L H N+++L L++E+ + L+ ++ + P +S V
Sbjct: 81 -IREVSLLKELQHRNIIELKSVIHHNHRLHLIFEY-AENDLKKYM-DKNPD-VSMRVIKS 136
Query: 195 VAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNA-----KLSDFGLAKAGPTGDRTH 249
G+ F H + ++RD K N+LL + K+ DFGLA+A R
Sbjct: 137 FLYQLINGVNFCH--SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQF 194
Query: 250 VSTQVMGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELL 288
T + T Y PE + R +T D++S + E+L
Sbjct: 195 --THEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 88/212 (41%), Gaps = 31/212 (14%)
Query: 103 IDQHSLSPAKPGSGMVVAVKKL--KPEGFQGHKEWLT------------------EVNYL 142
+D + + + GSG VKK K G Q +++ EV+ L
Sbjct: 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 68
Query: 143 GQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKG 202
++ HPN++ L + +L+ E + G L + L + A I G
Sbjct: 69 KEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--LNG 126
Query: 203 LTFLHDAESQVIYRDFKASNI-LLDAEF---NAKLSDFGLAKAGPTGDRTHVSTQVMGTH 258
+ +LH Q+ + D K NI LLD K+ DFGLA G+ + GT
Sbjct: 127 VYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTP 181
Query: 259 GYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+ APE V L ++D++S GV+ LLSG
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 70/171 (40%), Gaps = 21/171 (12%)
Query: 199 AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH 258
AKG+ FL A + I+RD A NILL + K+ DFGLA+
Sbjct: 202 VAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 259
Query: 259 GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPY--LSDK 316
+ APE + T +SDV+SFGV+L E+ S +G A PY +
Sbjct: 260 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------LG--------ASPYPGVKID 302
Query: 317 RKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 367
+ R + + P L C + EP RP SE++ L L
Sbjct: 303 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 353
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 109/248 (43%), Gaps = 43/248 (17%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFV---YKGWIDQHSLSPAKPGSGMVVAVKKL-KPEG 128
TF LK +N +P +G G G V Y ++++ VA+KKL +P
Sbjct: 24 TFTVLKR-YQNLKP---IGSGAQGIVCAAYDAILERN------------VAIKKLSRPFQ 67
Query: 129 FQGH-KEWLTEVNYLGQLHHPNLVKLIGYCL------EGENRLLVYEFMPKGSLENHLFR 181
Q H K E+ + ++H N++ L+ E ++ +V E M +
Sbjct: 68 NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME 127
Query: 182 RGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKA 241
+ +S+ + + G+ LH A +I+RD K SNI++ ++ K+ DFGLA+
Sbjct: 128 LDHERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLART 180
Query: 242 GPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS------GRCAVD 295
T + + T + T Y APE + D++S G ++ E++ GR +D
Sbjct: 181 AGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYID 237
Query: 296 KTKVGIEQ 303
+ IEQ
Sbjct: 238 QWNKVIEQ 245
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 102/229 (44%), Gaps = 37/229 (16%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFV---YKGWIDQHSLSPAKPGSGMVVAVKKL-KPEG 128
TF LK +N +P +G G G V Y ++++ VA+KKL +P
Sbjct: 19 TFTVLKR-YQNLKP---IGSGAQGIVCAAYDAILERN------------VAIKKLSRPFQ 62
Query: 129 FQGH-KEWLTEVNYLGQLHHPNLVKLIGYCL------EGENRLLVYEFMPKGSLENHLFR 181
Q H K E+ + ++H N++ L+ E ++ +V E M +
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME 122
Query: 182 RGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKA 241
+ +S+ + + G+ LH A +I+RD K SNI++ ++ K+ DFGLA+
Sbjct: 123 LDHERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLART 175
Query: 242 GPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
T + + T + T Y APE + D++S G ++ E++ G
Sbjct: 176 AGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 103/229 (44%), Gaps = 37/229 (16%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFV---YKGWIDQHSLSPAKPGSGMVVAVKKL-KPEG 128
TF LK +N +P +G G G V Y ++++ VA+KKL +P
Sbjct: 19 TFTVLKR-YQNLKP---IGSGAQGIVCAAYDAILERN------------VAIKKLSRPFQ 62
Query: 129 FQGH-KEWLTEVNYLGQLHHPNLVKLIGYCL------EGENRLLVYEFMPKGSLENHLFR 181
Q H K E+ + ++H N++ L+ E ++ +V E M +
Sbjct: 63 NQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME 122
Query: 182 RGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKA 241
+ +S+ + + G+ LH A +I+RD K SNI++ ++ K+ DFGLA+
Sbjct: 123 LDHERMSYLLYQMLV-----GIKHLHSA--GIIHRDLKPSNIVVKSDATLKILDFGLART 175
Query: 242 GPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
T + + T + T Y APE + D++S GV++ E++ G
Sbjct: 176 AGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 70/171 (40%), Gaps = 21/171 (12%)
Query: 199 AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH 258
AKG+ FL A + I+RD A NILL + K+ DFGLA+
Sbjct: 200 VAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 257
Query: 259 GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPY--LSDK 316
+ APE + T +SDV+SFGV+L E+ S +G A PY +
Sbjct: 258 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------LG--------ASPYPGVKID 300
Query: 317 RKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 367
+ R + + P L C + EP RP SE++ L L
Sbjct: 301 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 351
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 90/205 (43%), Gaps = 21/205 (10%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWL-TEVNYLGQLHHP 148
LG G FG V H ++ G+ K + KE + E+ + L HP
Sbjct: 165 LGTGAFGVV-------HRVTERATGNNFAA---KFVMTPHESDKETVRKEIQTMSVLRHP 214
Query: 149 NLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHD 208
LV L + +++YEFM G L + + +S ++ KGL +H
Sbjct: 215 TLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK-MSEDEAVEYMRQVCKGLCHMH- 272
Query: 209 AESQVIYRDFKASNILLDAEFNA--KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYV 266
E+ ++ D K NI+ + + KL DFGL V+T GT +AAPE V
Sbjct: 273 -ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPE-V 327
Query: 267 ATGR-LTTKSDVYSFGVVLLELLSG 290
A G+ + +D++S GV+ LLSG
Sbjct: 328 AEGKPVGYYTDMWSVGVLSYILLSG 352
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 72/162 (44%), Gaps = 20/162 (12%)
Query: 138 EVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRGPQPLSWA----VR 192
E + + + P +V+L Y + + L +V E+MP G L N L P WA
Sbjct: 119 ERDIMAFANSPWVVQLF-YAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAE 176
Query: 193 MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVST 252
+ +A+ A + F+H RD K N+LLD + KL+DFG T
Sbjct: 177 VVLALDAIHSMGFIH--------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT 228
Query: 253 QVMGTHGYAAPEYVAT----GRLTTKSDVYSFGVVLLELLSG 290
V GT Y +PE + + G + D +S GV L E+L G
Sbjct: 229 AV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 269
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 123/289 (42%), Gaps = 44/289 (15%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KP-EGFQ 130
T E+ +N P +G G +G V + +G+ VAVKKL +P +
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSII 63
Query: 131 GHKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFMPKGSLENHLFRRGPQ 185
K E+ L + H N++ L+ LE N + + + L N + Q
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 120
Query: 186 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 245
L+ + +GL ++H A+ +I+RD K SN+ ++ + K+ D GLA+ T
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDGGLARH--TD 176
Query: 246 DRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQS 304
D T + T Y APE + ++ D++S G ++ ELL+GR T
Sbjct: 177 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD------ 227
Query: 305 LVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 353
++ + + R++ T G + +K + +A +Q L PK+
Sbjct: 228 -------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQMPKM 268
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 102/229 (44%), Gaps = 37/229 (16%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFV---YKGWIDQHSLSPAKPGSGMVVAVKKL-KPEG 128
TF LK +N +P +G G G V Y ++++ VA+KKL +P
Sbjct: 19 TFTVLKR-YQNLKP---IGSGAQGIVCAAYDAILERN------------VAIKKLSRPFQ 62
Query: 129 FQGH-KEWLTEVNYLGQLHHPNLVKLIGYCL------EGENRLLVYEFMPKGSLENHLFR 181
Q H K E+ + ++H N++ L+ E ++ +V E M +
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME 122
Query: 182 RGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKA 241
+ +S+ + + G+ LH A +I+RD K SNI++ ++ K+ DFGLA+
Sbjct: 123 LDHERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLART 175
Query: 242 GPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
T + + T + T Y APE + D++S G ++ E++ G
Sbjct: 176 AGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 102/229 (44%), Gaps = 37/229 (16%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFV---YKGWIDQHSLSPAKPGSGMVVAVKKL-KPEG 128
TF LK +N +P +G G G V Y ++++ VA+KKL +P
Sbjct: 20 TFTVLKR-YQNLKP---IGSGAQGIVCAAYDAILERN------------VAIKKLSRPFQ 63
Query: 129 FQGH-KEWLTEVNYLGQLHHPNLVKLIGYCL------EGENRLLVYEFMPKGSLENHLFR 181
Q H K E+ + ++H N++ L+ E ++ +V E M +
Sbjct: 64 NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME 123
Query: 182 RGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKA 241
+ +S+ + + G+ LH A +I+RD K SNI++ ++ K+ DFGLA+
Sbjct: 124 LDHERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLART 176
Query: 242 GPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
T + + T + T Y APE + D++S G ++ E++ G
Sbjct: 177 AGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 73/157 (46%), Gaps = 11/157 (7%)
Query: 138 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 197
EV+ L ++ HPN++ L + +L+ E + G L + L + + L+ +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLK 121
Query: 198 GAAKGLTFLHDAESQVIYRDFKASNI-LLDAEF---NAKLSDFGLAKAGPTGDRTHVSTQ 253
G+ +LH Q+ + D K NI LLD K+ DFGLA G+
Sbjct: 122 QILNGVYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KN 176
Query: 254 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+ GT + APE V L ++D++S GV+ LLSG
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 90/212 (42%), Gaps = 31/212 (14%)
Query: 103 IDQHSLSPAKPGSGMVVAVKKL--KPEGFQGHKEWLT------------------EVNYL 142
+D + + + GSG VKK K G Q +++ EV+ L
Sbjct: 8 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 67
Query: 143 GQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKG 202
++ HPN++ L + +L+ E + G L + L + + L+ + G
Sbjct: 68 KEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNG 125
Query: 203 LTFLHDAESQVIYRDFKASNI-LLDAEF---NAKLSDFGLAKAGPTGDRTHVSTQVMGTH 258
+ +LH Q+ + D K NI LLD K+ DFGLA G+ + GT
Sbjct: 126 VYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTP 180
Query: 259 GYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+ APE V L ++D++S GV+ LLSG
Sbjct: 181 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 73/157 (46%), Gaps = 11/157 (7%)
Query: 138 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 197
EV+ L ++ HPN++ L + +L+ E + G L + L + + L+ +
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLK 120
Query: 198 GAAKGLTFLHDAESQVIYRDFKASNI-LLDAEF---NAKLSDFGLAKAGPTGDRTHVSTQ 253
G+ +LH Q+ + D K NI LLD K+ DFGLA G+
Sbjct: 121 QILNGVYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KN 175
Query: 254 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+ GT + APE V L ++D++S GV+ LLSG
Sbjct: 176 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 103/229 (44%), Gaps = 37/229 (16%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFV---YKGWIDQHSLSPAKPGSGMVVAVKKL-KPEG 128
TF LK +N +P +G G G V Y ++++ VA+KKL +P
Sbjct: 19 TFTVLKR-YQNLKP---IGSGAQGIVVAAYDAILERN------------VAIKKLSRPFQ 62
Query: 129 FQGH-KEWLTEVNYLGQLHHPNLVKLIGYCL------EGENRLLVYEFMPKGSLENHLFR 181
Q H K E+ + ++H N++ L+ E ++ +V E M +
Sbjct: 63 NQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME 122
Query: 182 RGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKA 241
+ +S+ + + G+ LH A +I+RD K SNI++ ++ K+ DFGLA+
Sbjct: 123 LDHERMSYLLYQMLV-----GIKHLHSA--GIIHRDLKPSNIVVKSDATLKILDFGLART 175
Query: 242 GPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
T + + T + T Y APE + D++S GV++ E++ G
Sbjct: 176 AGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 82/167 (49%), Gaps = 33/167 (19%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL----KPEGFQGHKEWLTEVNYLGQL 145
+G+G FG V+K +H +G VA+KK+ + EGF L E+ L L
Sbjct: 26 IGQGTFGEVFKA---RHR------KTGQKVALKKVLMENEKEGFPITA--LREIKILQLL 74
Query: 146 HHPNLVKLIGYCLEGE---NRL-----LVYEFMPK---GSLENHLFRRGPQPLSWAVRMK 194
H N+V LI C NR LV++F G L N L + + ++M
Sbjct: 75 KHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQML 134
Query: 195 VAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKA 241
+ GL ++H +++++RD KA+N+L+ + KL+DFGLA+A
Sbjct: 135 L-----NGLYYIH--RNKILHRDMKAANVLITRDGVLKLADFGLARA 174
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 90/212 (42%), Gaps = 31/212 (14%)
Query: 103 IDQHSLSPAKPGSGMVVAVKKL--KPEGFQGHKEWLT------------------EVNYL 142
+D + + + GSG VKK K G Q +++ EV+ L
Sbjct: 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 68
Query: 143 GQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKG 202
++ HPN++ L + +L+ E + G L + L + + L+ + G
Sbjct: 69 KEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNG 126
Query: 203 LTFLHDAESQVIYRDFKASNI-LLDAEF---NAKLSDFGLAKAGPTGDRTHVSTQVMGTH 258
+ +LH Q+ + D K NI LLD K+ DFGLA G+ + GT
Sbjct: 127 VYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTP 181
Query: 259 GYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+ APE V L ++D++S GV+ LLSG
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 72/162 (44%), Gaps = 20/162 (12%)
Query: 138 EVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRGPQPLSWA----VR 192
E + + + P +V+L Y + + L +V E+MP G L N L P WA
Sbjct: 124 ERDIMAFANSPWVVQLF-YAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAE 181
Query: 193 MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVST 252
+ +A+ A + F+H RD K N+LLD + KL+DFG T
Sbjct: 182 VVLALDAIHSMGFIH--------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT 233
Query: 253 QVMGTHGYAAPEYVAT----GRLTTKSDVYSFGVVLLELLSG 290
V GT Y +PE + + G + D +S GV L E+L G
Sbjct: 234 AV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 72/162 (44%), Gaps = 20/162 (12%)
Query: 138 EVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRGPQPLSWA----VR 192
E + + + P +V+L Y + + L +V E+MP G L N L P WA
Sbjct: 124 ERDIMAFANSPWVVQLF-YAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAE 181
Query: 193 MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVST 252
+ +A+ A + F+H RD K N+LLD + KL+DFG T
Sbjct: 182 VVLALDAIHSMGFIH--------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT 233
Query: 253 QVMGTHGYAAPEYVAT----GRLTTKSDVYSFGVVLLELLSG 290
V GT Y +PE + + G + D +S GV L E+L G
Sbjct: 234 AV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 73/157 (46%), Gaps = 11/157 (7%)
Query: 138 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 197
EV+ L ++ HPN++ L + +L+ E + G L + L + + L+ +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLK 121
Query: 198 GAAKGLTFLHDAESQVIYRDFKASNI-LLDAEF---NAKLSDFGLAKAGPTGDRTHVSTQ 253
G+ +LH Q+ + D K NI LLD K+ DFGLA G+
Sbjct: 122 QILNGVYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KN 176
Query: 254 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+ GT + APE V L ++D++S GV+ LLSG
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 82/167 (49%), Gaps = 33/167 (19%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL----KPEGFQGHKEWLTEVNYLGQL 145
+G+G FG V+K +H +G VA+KK+ + EGF L E+ L L
Sbjct: 25 IGQGTFGEVFKA---RHR------KTGQKVALKKVLMENEKEGFPITA--LREIKILQLL 73
Query: 146 HHPNLVKLIGYCLEGE---NRL-----LVYEFMPK---GSLENHLFRRGPQPLSWAVRMK 194
H N+V LI C NR LV++F G L N L + + ++M
Sbjct: 74 KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQML 133
Query: 195 VAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKA 241
+ GL ++H +++++RD KA+N+L+ + KL+DFGLA+A
Sbjct: 134 L-----NGLYYIH--RNKILHRDMKAANVLITRDGVLKLADFGLARA 173
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 109/248 (43%), Gaps = 43/248 (17%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFV---YKGWIDQHSLSPAKPGSGMVVAVKKL-KPEG 128
TF LK +N +P +G G G V Y ++++ VA+KKL +P
Sbjct: 13 TFTVLKR-YQNLKP---IGSGAQGIVCAAYDAILERN------------VAIKKLSRPFQ 56
Query: 129 FQGH-KEWLTEVNYLGQLHHPNLVKLIGYCL------EGENRLLVYEFMPKGSLENHLFR 181
Q H K E+ + ++H N++ L+ E ++ +V E M +
Sbjct: 57 NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME 116
Query: 182 RGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKA 241
+ +S+ + + G+ LH A +I+RD K SNI++ ++ K+ DFGLA+
Sbjct: 117 LDHERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLART 169
Query: 242 GPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS------GRCAVD 295
T + + T + T Y APE + D++S G ++ E++ GR +D
Sbjct: 170 AGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYID 226
Query: 296 KTKVGIEQ 303
+ IEQ
Sbjct: 227 QWNKVIEQ 234
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 130/303 (42%), Gaps = 42/303 (13%)
Query: 89 LLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHP 148
++G G FG V++ AK VA+KK+ Q + E+ + + HP
Sbjct: 47 VIGNGSFGVVFQ----------AKLVESDEVAIKKV----LQDKRFKNRELQIMRIVKHP 92
Query: 149 NLVKLIGYCLEGENRL------LVYEFMPKGSLE-NHLFRRGPQPLSWAVRMKVAIGAAK 201
N+V L + ++ LV E++P+ + + + Q + + +
Sbjct: 93 NVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLR 152
Query: 202 GLTFLHDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHGY 260
L ++H + +RD K N+LLD KL DFG AK G+ + + + Y
Sbjct: 153 SLAYIHSI--GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEP---NVSXICSRYY 207
Query: 261 AAPEYV-ATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKL 319
APE + TT D++S G V+ EL+ G+ + + GI+Q LV+ K + R+
Sbjct: 208 RAPELIFGATNYTTNIDIWSTGCVMAELMQGQ-PLFPGESGIDQ-LVEIIKVLGTPSREQ 265
Query: 320 FRIMD-TKLGGQYPQKAAHTAATLALQCLNNEPKLRPRM-SEVLAILERLEAPKNSAKLS 377
+ M+ + ++PQ H + + RPR + + ++ RL SA+L+
Sbjct: 266 IKTMNPNYMEHKFPQIRPHPFSKV----------FRPRTPPDAIDLISRLLEYTPSARLT 315
Query: 378 QSE 380
E
Sbjct: 316 AIE 318
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 88/212 (41%), Gaps = 31/212 (14%)
Query: 103 IDQHSLSPAKPGSGMVVAVKKL--KPEGFQGHKEWLT------------------EVNYL 142
+D + + + GSG VKK K G Q +++ EV+ L
Sbjct: 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 68
Query: 143 GQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKG 202
++ HPN++ L + +L+ E + G L + L + A I G
Sbjct: 69 KEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--LNG 126
Query: 203 LTFLHDAESQVIYRDFKASNI-LLDAEF---NAKLSDFGLAKAGPTGDRTHVSTQVMGTH 258
+ +LH Q+ + D K NI LLD K+ DFGLA G+ + GT
Sbjct: 127 VYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTP 181
Query: 259 GYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+ APE V L ++D++S GV+ LLSG
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 90/212 (42%), Gaps = 31/212 (14%)
Query: 103 IDQHSLSPAKPGSGMVVAVKKL--KPEGFQGHKEWLT------------------EVNYL 142
+D + + + GSG VKK K G Q +++ EV+ L
Sbjct: 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 68
Query: 143 GQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKG 202
++ HPN++ L + +L+ E + G L + L + + L+ + G
Sbjct: 69 KEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNG 126
Query: 203 LTFLHDAESQVIYRDFKASNI-LLDAEF---NAKLSDFGLAKAGPTGDRTHVSTQVMGTH 258
+ +LH Q+ + D K NI LLD K+ DFGLA G+ + GT
Sbjct: 127 VYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTP 181
Query: 259 GYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+ APE V L ++D++S GV+ LLSG
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 102/229 (44%), Gaps = 37/229 (16%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFV---YKGWIDQHSLSPAKPGSGMVVAVKKL-KPEG 128
TF LK +N +P +G G G V Y ++++ VA+KKL +P
Sbjct: 19 TFTVLKR-YQNLKP---IGSGAQGIVCAAYDAILERN------------VAIKKLSRPFQ 62
Query: 129 FQGH-KEWLTEVNYLGQLHHPNLVKLIGYCL------EGENRLLVYEFMPKGSLENHLFR 181
Q H K E+ + ++H N++ L+ E ++ +V E M +
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME 122
Query: 182 RGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKA 241
+ +S+ + + G+ LH A +I+RD K SNI++ ++ K+ DFGLA+
Sbjct: 123 LDHERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLART 175
Query: 242 GPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
T + + T + T Y APE + D++S G ++ E++ G
Sbjct: 176 AGT---SFMMTPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 111/244 (45%), Gaps = 40/244 (16%)
Query: 66 SSNLKAFTFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLK 125
S N+ F +L + + +P LG GG G V+ S VA+KK+
Sbjct: 1 SMNIHGF---DLGSRYMDLKP---LGCGGNGLVF---------SAVDNDCDKRVAIKKIV 45
Query: 126 PEGFQGHKEWLTEVNYLGQLHHPNLVKL--------------IGYCLEGENRLLVYEFMP 171
Q K L E+ + +L H N+VK+ +G E + +V E+M
Sbjct: 46 LTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYM- 104
Query: 172 KGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAE-FN 230
+ L N + +GP L R+ +GL ++H A V++RD K +N+ ++ E
Sbjct: 105 ETDLAN-VLEQGPL-LEEHARL-FMYQLLRGLKYIHSA--NVLHRDLKPANLFINTEDLV 159
Query: 231 AKLSDFGLAKAGP--TGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLEL 287
K+ DFGLA+ + H+S ++ T Y +P + + TK+ D+++ G + E+
Sbjct: 160 LKIGDFGLARIMDPHYSHKGHLSEGLV-TKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEM 218
Query: 288 LSGR 291
L+G+
Sbjct: 219 LTGK 222
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 101/236 (42%), Gaps = 47/236 (19%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYL 142
+F ++LG+G FG V K +++L A+KK++ + L+EV L
Sbjct: 7 DFEEIAVLGQGAFGQVVKA---RNALDSR------YYAIKKIRHTE-EKLSTILSEVMLL 56
Query: 143 GQLHHPNLVKLIGYCLEGEN-------------RLLVYEFMPKGSLENHLFRRG---PQP 186
L+H +V+ LE N + E+ +L + + +
Sbjct: 57 ASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRD 116
Query: 187 LSWAVRMKVAIGAAKGLTFLHDAESQ-VIYRDFKASNILLDAEFNAKLSDFGLAK-AGPT 244
W + ++ + L+++H SQ +I+RD K NI +D N K+ DFGLAK +
Sbjct: 117 EYWRLFRQIL----EALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRS 169
Query: 245 GDRTHVSTQ-----------VMGTHGYAAPEYV-ATGRLTTKSDVYSFGVVLLELL 288
D + +Q +GT Y A E + TG K D+YS G++ E++
Sbjct: 170 LDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 88/212 (41%), Gaps = 31/212 (14%)
Query: 103 IDQHSLSPAKPGSGMVVAVKKL--KPEGFQGHKEWLT------------------EVNYL 142
+D + + + GSG VKK K G Q +++ EV+ L
Sbjct: 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 68
Query: 143 GQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKG 202
++ HPN++ L + +L+ E + G L + L + A I G
Sbjct: 69 KEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--LNG 126
Query: 203 LTFLHDAESQVIYRDFKASNI-LLDAEF---NAKLSDFGLAKAGPTGDRTHVSTQVMGTH 258
+ +LH Q+ + D K NI LLD K+ DFGLA G+ + GT
Sbjct: 127 VYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTP 181
Query: 259 GYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+ APE V L ++D++S GV+ LLSG
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 90/212 (42%), Gaps = 31/212 (14%)
Query: 103 IDQHSLSPAKPGSGMVVAVKKL--KPEGFQGHKEWLT------------------EVNYL 142
+D + + + GSG VKK K G Q +++ EV+ L
Sbjct: 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 68
Query: 143 GQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKG 202
++ HPN++ L + +L+ E + G L + L + + L+ + G
Sbjct: 69 KEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNG 126
Query: 203 LTFLHDAESQVIYRDFKASNI-LLDAEF---NAKLSDFGLAKAGPTGDRTHVSTQVMGTH 258
+ +LH Q+ + D K NI LLD K+ DFGLA G+ + GT
Sbjct: 127 VYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTP 181
Query: 259 GYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+ APE V L ++D++S GV+ LLSG
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 82/167 (49%), Gaps = 33/167 (19%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL----KPEGFQGHKEWLTEVNYLGQL 145
+G+G FG V+K +H +G VA+KK+ + EGF L E+ L L
Sbjct: 26 IGQGTFGEVFKA---RHR------KTGQKVALKKVLMENEKEGFPITA--LREIKILQLL 74
Query: 146 HHPNLVKLIGYCLEGE---NRL-----LVYEFMP---KGSLENHLFRRGPQPLSWAVRMK 194
H N+V LI C NR LV++F G L N L + + ++M
Sbjct: 75 KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQML 134
Query: 195 VAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKA 241
+ GL ++H +++++RD KA+N+L+ + KL+DFGLA+A
Sbjct: 135 L-----NGLYYIH--RNKILHRDMKAANVLITRDGVLKLADFGLARA 174
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 77/168 (45%), Gaps = 27/168 (16%)
Query: 130 QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLS- 188
G +W+T ++Y Q NL ++ Y + G+ L+ +F R P+ ++
Sbjct: 130 NGDSKWITTLHYAFQ-DDNNLYLVMDYYVGGDLLTLLSKFED----------RLPEEMAR 178
Query: 189 -WAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDR 247
+ M +AI + L ++H RD K NIL+D + +L+DFG + D
Sbjct: 179 FYLAEMVIAIDSVHQLHYVH--------RDIKPDNILMDMNGHIRLADFG-SCLKLMEDG 229
Query: 248 THVSTQVMGTHGYAAPEYV-----ATGRLTTKSDVYSFGVVLLELLSG 290
T S+ +GT Y +PE + GR + D +S GV + E+L G
Sbjct: 230 TVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYG 277
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 100/227 (44%), Gaps = 30/227 (13%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KP-EGFQ 130
T E+ +N P +G G +G V + +G VAVKKL +P +
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSVCAAF---------DTKTGHRVAVKKLSRPFQSII 63
Query: 131 GHKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFMPKGSLENHLFRRGPQ 185
K E+ L + H N++ L+ LE N + + + L N + Q
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 120
Query: 186 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 245
L+ + +GL ++H A+ +I+RD K SN+ ++ + K+ DF LA+ T
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFYLARH--TD 176
Query: 246 DRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 291
D T + T Y APE + ++ D++S G ++ ELL+GR
Sbjct: 177 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 101/229 (44%), Gaps = 37/229 (16%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFV---YKGWIDQHSLSPAKPGSGMVVAVKKL-KPEG 128
TF LK +N +P +G G G V Y ++++ VA+KKL +P
Sbjct: 21 TFTVLKR-YQNLKP---IGSGAQGIVCAAYDAILERN------------VAIKKLSRPFQ 64
Query: 129 FQGH-KEWLTEVNYLGQLHHPNLVKLIGYCL------EGENRLLVYEFMPKGSLENHLFR 181
Q H K E+ + ++H N++ L+ E ++ +V E M +
Sbjct: 65 NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME 124
Query: 182 RGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKA 241
+ +S+ + + G+ LH A +I+RD K SNI++ ++ K+ DFGLA+
Sbjct: 125 LDHERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLART 177
Query: 242 GPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
T + + + T Y APE + D++S G ++ E++ G
Sbjct: 178 AGT---SFMMVPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 102/229 (44%), Gaps = 37/229 (16%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFV---YKGWIDQHSLSPAKPGSGMVVAVKKL-KPEG 128
TF LK +N +P +G G G V Y ++++ VA+KKL +P
Sbjct: 19 TFTVLKR-YQNLKP---IGSGAQGIVCAAYDAILERN------------VAIKKLSRPFQ 62
Query: 129 FQGH-KEWLTEVNYLGQLHHPNLVKLIGYCL------EGENRLLVYEFMPKGSLENHLFR 181
Q H K E+ + ++H N++ L+ E ++ +V E M +
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME 122
Query: 182 RGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKA 241
+ +S+ + + G+ LH A +I+RD K SNI++ ++ K+ DFGLA+
Sbjct: 123 LDHERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLART 175
Query: 242 GPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
T + + T + T Y APE + D++S G ++ E++ G
Sbjct: 176 AGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 73/157 (46%), Gaps = 11/157 (7%)
Query: 138 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 197
EV+ L ++ HPN++ L + +L+ E + G L + L + + L+ +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEK--ESLTEEEATEFLK 121
Query: 198 GAAKGLTFLHDAESQVIYRDFKASNI-LLDAEF---NAKLSDFGLAKAGPTGDRTHVSTQ 253
G+ +LH Q+ + D K NI LLD K+ DFGLA G+
Sbjct: 122 QILNGVYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KN 176
Query: 254 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+ GT + APE V L ++D++S GV+ LLSG
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 102/229 (44%), Gaps = 37/229 (16%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFV---YKGWIDQHSLSPAKPGSGMVVAVKKL-KPEG 128
TF LK +N +P +G G G V Y ++++ VA+KKL +P
Sbjct: 19 TFTVLKR-YQNLKP---IGSGAQGIVCAAYDAILERN------------VAIKKLSRPFQ 62
Query: 129 FQGH-KEWLTEVNYLGQLHHPNLVKLIGYCL------EGENRLLVYEFMPKGSLENHLFR 181
Q H K E+ + ++H N++ L+ E ++ +V E M +
Sbjct: 63 NQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME 122
Query: 182 RGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKA 241
+ +S+ + + G+ LH A +I+RD K SNI++ ++ K+ DFGLA+
Sbjct: 123 LDHERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDATLKILDFGLART 175
Query: 242 GPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
T + + T + T Y APE + D++S G ++ E++ G
Sbjct: 176 AGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 102/229 (44%), Gaps = 37/229 (16%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFV---YKGWIDQHSLSPAKPGSGMVVAVKKL-KPEG 128
TF LK +N +P +G G G V Y ++++ VA+KKL +P
Sbjct: 19 TFTVLKR-YQNLKP---IGSGAQGIVCAAYDAILERN------------VAIKKLSRPFQ 62
Query: 129 FQGH-KEWLTEVNYLGQLHHPNLVKLIGYCL------EGENRLLVYEFMPKGSLENHLFR 181
Q H K E+ + ++H N++ L+ E ++ +V E M +
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME 122
Query: 182 RGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKA 241
+ +S+ + + G+ LH A +I+RD K SNI++ ++ K+ DFGLA+
Sbjct: 123 LDHERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDATLKILDFGLART 175
Query: 242 GPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
T + + T + T Y APE + D++S G ++ E++ G
Sbjct: 176 AGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 102/229 (44%), Gaps = 37/229 (16%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFV---YKGWIDQHSLSPAKPGSGMVVAVKKL-KPEG 128
TF LK +N +P +G G G V Y ++++ VA+KKL +P
Sbjct: 19 TFTVLKR-YQNLKP---IGSGAQGIVCAAYDAILERN------------VAIKKLSRPFQ 62
Query: 129 FQGH-KEWLTEVNYLGQLHHPNLVKLIGYCL------EGENRLLVYEFMPKGSLENHLFR 181
Q H K E+ + ++H N++ L+ E ++ +V E M +
Sbjct: 63 NQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME 122
Query: 182 RGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKA 241
+ +S+ + + G+ LH A +I+RD K SNI++ ++ K+ DFGLA+
Sbjct: 123 LDHERMSYLLYQMLV-----GIKHLHSA--GIIHRDLKPSNIVVKSDATLKILDFGLART 175
Query: 242 GPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
T + + T + T Y APE + D++S G ++ E++ G
Sbjct: 176 AGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 109/248 (43%), Gaps = 43/248 (17%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFV---YKGWIDQHSLSPAKPGSGMVVAVKKL-KPEG 128
TF LK +N +P +G G G V Y ++++ VA+KKL +P
Sbjct: 19 TFTVLKR-YQNLKP---IGSGAQGIVCAAYDAILERN------------VAIKKLSRPFQ 62
Query: 129 FQGH-KEWLTEVNYLGQLHHPNLVKLIGYCL------EGENRLLVYEFMPKGSLENHLFR 181
Q H K E+ + ++H N++ L+ E ++ +V E M +
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME 122
Query: 182 RGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKA 241
+ +S+ + + G+ LH A +I+RD K SNI++ ++ K+ DFGLA+
Sbjct: 123 LDHERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLART 175
Query: 242 GPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS------GRCAVD 295
G + +V+ T Y APE + D++S G ++ E++ GR +D
Sbjct: 176 A--GTSFMMEPEVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYID 232
Query: 296 KTKVGIEQ 303
+ IEQ
Sbjct: 233 QWNKVIEQ 240
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 72/158 (45%), Gaps = 9/158 (5%)
Query: 138 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSW--AVRMKV 195
E + L HP++V+L+ +V+EFM L + +R + AV
Sbjct: 78 EASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHY 137
Query: 196 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNA---KLSDFGLAKAGPTGDRTHVST 252
+ L + HD + +I+RD K +LL ++ N+ KL FG+A G+ V+
Sbjct: 138 MRQILEALRYCHD--NNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQ--LGESGLVAG 193
Query: 253 QVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+GT + APE V DV+ GV+L LLSG
Sbjct: 194 GRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 231
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 116/293 (39%), Gaps = 39/293 (13%)
Query: 77 LKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPE-GFQGHKEW 135
+ + P LG G +G V K +H SG + AVK+++ Q K
Sbjct: 29 FEVKADDLEPIXELGRGAYGVVEKX---RHV------PSGQIXAVKRIRATVNSQEQKRL 79
Query: 136 LTEVNYLGQ-LHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN---HLFRRGPQPLSWAV 191
L +++ + + P V G L E + + + SL+ + +G Q + +
Sbjct: 80 LXDLDISXRTVDCPFTVTFYG-ALFREGDVWICXELXDTSLDKFYKQVIDKG-QTIPEDI 137
Query: 192 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 251
K+A+ K L LH S VI+RD K SN+L++A K DFG+ +G D
Sbjct: 138 LGKIAVSIVKALEHLHSKLS-VIHRDVKPSNVLINALGQVKXCDFGI--SGYLVDDVAKD 194
Query: 252 TQVMGTHGYAAPEYV----ATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVD 307
G Y APE + + KSD++S G+ +EL R D
Sbjct: 195 IDA-GCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDS----------- 242
Query: 308 WAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEV 360
W P+ ++L ++++ K + QCL K RP E+
Sbjct: 243 WGTPF----QQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPEL 291
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 100/233 (42%), Gaps = 45/233 (19%)
Query: 89 LLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKP--EGFQGHKEWLTEVNYLGQLH 146
L+G G +G V + + VVA+KK+ E K L E+ L +L+
Sbjct: 60 LIGTGSYGHVCEAY---------DKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLN 110
Query: 147 HPNLVKLIGYCL----EGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKG 202
H ++VK++ + E + L V + + LFR P L+ + G
Sbjct: 111 HDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKK-LFR-TPVYLTELHIKTLLYNLLVG 168
Query: 203 LTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKA-------------GPTGDRTH 249
+ ++H A +++RD K +N L++ + + K+ DFGLA+ P D +
Sbjct: 169 VKYVHSA--GILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMN 226
Query: 250 VST---------QVMG---THGYAAPEYVATGRLTTKS-DVYSFGVVLLELLS 289
+ T Q+ G T Y APE + T++ DV+S G + ELL+
Sbjct: 227 LVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN 279
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 108/266 (40%), Gaps = 29/266 (10%)
Query: 146 HHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTF 205
HPN++ L +G+ +V E M G L + + R+ + S V K + +
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQ--KFFSEREASAVLFTITKTVEY 131
Query: 206 LHDAESQVIYRDFKASNIL-LDAEFN---AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 261
LH V++RD K SNIL +D N ++ DFG AK + ++ T +
Sbjct: 132 LH--AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTP--CYTANFV 187
Query: 262 APEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFR 321
APE + D++S GV+L +L+G P + + L R
Sbjct: 188 APEVLERQGYDAACDIWSLGVLLYTMLTGYTPFAN-------------GPDDTPEEILAR 234
Query: 322 IMDTK--LGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLA---ILERLEAPKNSAKL 376
I K L G Y + TA L + L+ +P R + VL I+ + P+
Sbjct: 235 IGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHWDQLPQYQLN- 293
Query: 377 SQSEPHRQTGPVTVRKSPMRQQRSPL 402
Q PH G + S + + +SP+
Sbjct: 294 RQDAPHLVKGAMAATYSALNRNQSPV 319
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 101/242 (41%), Gaps = 48/242 (19%)
Query: 78 KTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWL- 136
+T R +G+G FG V++G G VAVK + + W
Sbjct: 38 RTIARTIVLQESIGKGRFGEVWRG-----------KWRGEEVAVKIFSS---REERSWFR 83
Query: 137 -TEVNYLGQLHHPNLVKLIGYCLEGENR--------LLVYEFMPKGSLENHLFRRGPQPL 187
E+ L H N++ I +N+ LV ++ GSL ++L R +
Sbjct: 84 EAEIYQTVMLRHENILGFIA----ADNKDNGTWTQLWLVSDYHEHGSLFDYLNR---YTV 136
Query: 188 SWAVRMKVAIGAAKGLTFLH------DAESQVIYRDFKASNILLDAEFNAKLSDFGLA-K 240
+ +K+A+ A GL LH + + +RD K+ NIL+ ++D GLA +
Sbjct: 137 TVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR 196
Query: 241 AGPTGDRTHVS-TQVMGTHGYAAPEYVATGRLTTK-------SDVYSFGVVLLELLSGRC 292
D ++ +GT Y APE V + K +D+Y+ G+V E ++ RC
Sbjct: 197 HDSATDTIDIAPNHRVGTKRYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWE-IARRC 254
Query: 293 AV 294
++
Sbjct: 255 SI 256
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 101/242 (41%), Gaps = 48/242 (19%)
Query: 78 KTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWL- 136
+T R +G+G FG V++G G VAVK + + W
Sbjct: 25 RTIARTIVLQESIGKGRFGEVWRG-----------KWRGEEVAVKIFSS---REERSWFR 70
Query: 137 -TEVNYLGQLHHPNLVKLIGYCLEGENR--------LLVYEFMPKGSLENHLFRRGPQPL 187
E+ L H N++ I +N+ LV ++ GSL ++L R +
Sbjct: 71 EAEIYQTVMLRHENILGFIA----ADNKDNGTWTQLWLVSDYHEHGSLFDYLNR---YTV 123
Query: 188 SWAVRMKVAIGAAKGLTFLH------DAESQVIYRDFKASNILLDAEFNAKLSDFGLA-K 240
+ +K+A+ A GL LH + + +RD K+ NIL+ ++D GLA +
Sbjct: 124 TVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR 183
Query: 241 AGPTGDRTHVS-TQVMGTHGYAAPEYVATGRLTTK-------SDVYSFGVVLLELLSGRC 292
D ++ +GT Y APE V + K +D+Y+ G+V E ++ RC
Sbjct: 184 HDSATDTIDIAPNHRVGTKRYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWE-IARRC 241
Query: 293 AV 294
++
Sbjct: 242 SI 243
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 72/158 (45%), Gaps = 9/158 (5%)
Query: 138 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSW--AVRMKV 195
E + L HP++V+L+ +V+EFM L + +R + AV
Sbjct: 76 EASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHY 135
Query: 196 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNA---KLSDFGLAKAGPTGDRTHVST 252
+ L + HD + +I+RD K +LL ++ N+ KL FG+A G+ V+
Sbjct: 136 MRQILEALRYCHD--NNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQ--LGESGLVAG 191
Query: 253 QVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+GT + APE V DV+ GV+L LLSG
Sbjct: 192 GRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 87/204 (42%), Gaps = 16/204 (7%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
LG+G F V + + + + M++ KKL + H++ E L HPN
Sbjct: 19 LGKGAFSVVRRC----VKVLAGQEYAAMIINTKKLSA---RDHQKLEREARICRLLKHPN 71
Query: 150 LVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDA 209
+V+L E + L+++ + G L + R + A I A LH
Sbjct: 72 IVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEA----VLHCH 127
Query: 210 ESQVIYRDFKASNILLDAEFN---AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYV 266
+ V++R+ K N+LL ++ KL+DFGLA + GT GY +PE +
Sbjct: 128 QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFG--FAGTPGYLSPEVL 185
Query: 267 ATGRLTTKSDVYSFGVVLLELLSG 290
D+++ GV+L LL G
Sbjct: 186 RKDPYGKPVDLWACGVILYILLVG 209
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 109/248 (43%), Gaps = 43/248 (17%)
Query: 73 TFNELKTATRNFRPDSLLGEGGFGFV---YKGWIDQHSLSPAKPGSGMVVAVKKL-KPEG 128
TF LK +N +P +G G G V Y ++++ VA+KKL +P
Sbjct: 19 TFTVLKR-YQNLKP---IGSGAQGIVCAAYDAILERN------------VAIKKLSRPFQ 62
Query: 129 FQGH-KEWLTEVNYLGQLHHPNLVKLIGYCL------EGENRLLVYEFMPKGSLENHLFR 181
Q H K E+ + ++H N++ L+ E ++ +V E M +
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME 122
Query: 182 RGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKA 241
+ +S+ + + G+ LH A +I+RD K SNI++ ++ K+ DFGLA+
Sbjct: 123 LDHERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLART 175
Query: 242 GPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS------GRCAVD 295
G + +V+ T Y APE + D++S G ++ E++ GR +D
Sbjct: 176 A--GTSFMMEPEVV-TRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYID 232
Query: 296 KTKVGIEQ 303
+ IEQ
Sbjct: 233 QWNKVIEQ 240
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 100/241 (41%), Gaps = 48/241 (19%)
Query: 79 TATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWL-- 136
T R +G+G FG V++G G VAVK + + W
Sbjct: 1 TIARTIVLQESIGKGRFGEVWRG-----------KWRGEEVAVKIFSS---REERSWFRE 46
Query: 137 TEVNYLGQLHHPNLVKLIGYCLEGENR--------LLVYEFMPKGSLENHLFRRGPQPLS 188
E+ L H N++ I +N+ LV ++ GSL ++L R ++
Sbjct: 47 AEIYQTVMLRHENILGFIA----ADNKDNGTWTQLWLVSDYHEHGSLFDYLNR---YTVT 99
Query: 189 WAVRMKVAIGAAKGLTFLH------DAESQVIYRDFKASNILLDAEFNAKLSDFGLA-KA 241
+K+A+ A GL LH + + +RD K+ NIL+ ++D GLA +
Sbjct: 100 VEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 159
Query: 242 GPTGDRTHVS-TQVMGTHGYAAPEYVATGRLTTK-------SDVYSFGVVLLELLSGRCA 293
D ++ +GT Y APE V + K +D+Y+ G+V E ++ RC+
Sbjct: 160 DSATDTIDIAPNHRVGTKRYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWE-IARRCS 217
Query: 294 V 294
+
Sbjct: 218 I 218
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 100/241 (41%), Gaps = 48/241 (19%)
Query: 79 TATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWL-- 136
T R +G+G FG V++G G VAVK + + W
Sbjct: 3 TIARTIVLQESIGKGRFGEVWRG-----------KWRGEEVAVKIFSS---REERSWFRE 48
Query: 137 TEVNYLGQLHHPNLVKLIGYCLEGENR--------LLVYEFMPKGSLENHLFRRGPQPLS 188
E+ L H N++ I +N+ LV ++ GSL ++L R ++
Sbjct: 49 AEIYQTVMLRHENILGFIA----ADNKDNGTWTQLWLVSDYHEHGSLFDYLNR---YTVT 101
Query: 189 WAVRMKVAIGAAKGLTFLH------DAESQVIYRDFKASNILLDAEFNAKLSDFGLA-KA 241
+K+A+ A GL LH + + +RD K+ NIL+ ++D GLA +
Sbjct: 102 VEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 161
Query: 242 GPTGDRTHVS-TQVMGTHGYAAPEYVATGRLTTK-------SDVYSFGVVLLELLSGRCA 293
D ++ +GT Y APE V + K +D+Y+ G+V E ++ RC+
Sbjct: 162 DSATDTIDIAPNHRVGTKRYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWE-IARRCS 219
Query: 294 V 294
+
Sbjct: 220 I 220
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 100/241 (41%), Gaps = 48/241 (19%)
Query: 79 TATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWL-- 136
T R +G+G FG V++G G VAVK + + W
Sbjct: 6 TIARTIVLQESIGKGRFGEVWRG-----------KWRGEEVAVKIFSS---REERSWFRE 51
Query: 137 TEVNYLGQLHHPNLVKLIGYCLEGENR--------LLVYEFMPKGSLENHLFRRGPQPLS 188
E+ L H N++ I +N+ LV ++ GSL ++L R ++
Sbjct: 52 AEIYQTVMLRHENILGFIA----ADNKDNGTWTQLWLVSDYHEHGSLFDYLNR---YTVT 104
Query: 189 WAVRMKVAIGAAKGLTFLH------DAESQVIYRDFKASNILLDAEFNAKLSDFGLA-KA 241
+K+A+ A GL LH + + +RD K+ NIL+ ++D GLA +
Sbjct: 105 VEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 164
Query: 242 GPTGDRTHVS-TQVMGTHGYAAPEYVATGRLTTK-------SDVYSFGVVLLELLSGRCA 293
D ++ +GT Y APE V + K +D+Y+ G+V E ++ RC+
Sbjct: 165 DSATDTIDIAPNHRVGTKRYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWE-IARRCS 222
Query: 294 V 294
+
Sbjct: 223 I 223
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 98/230 (42%), Gaps = 48/230 (20%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWL--TEVNYLGQLHH 147
+G+G FG V++G G VAVK + + W E+ L H
Sbjct: 11 IGKGRFGEVWRG-----------KWRGEEVAVKIFSS---REERSWFREAEIYQTVMLRH 56
Query: 148 PNLVKLIGYCLEGENR--------LLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGA 199
N++ I +N+ LV ++ GSL ++L R ++ +K+A+
Sbjct: 57 ENILGFIA----ADNKDNGTWTQLWLVSDYHEHGSLFDYLNR---YTVTVEGMIKLALST 109
Query: 200 AKGLTFLH------DAESQVIYRDFKASNILLDAEFNAKLSDFGLA-KAGPTGDRTHVS- 251
A GL LH + + +RD K+ NIL+ ++D GLA + D ++
Sbjct: 110 ASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAP 169
Query: 252 TQVMGTHGYAAPEYVATGRLTTK-------SDVYSFGVVLLELLSGRCAV 294
+GT Y APE V + K +D+Y+ G+V E ++ RC++
Sbjct: 170 NHRVGTKRYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWE-IARRCSI 217
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 68/151 (45%), Gaps = 25/151 (16%)
Query: 165 LVYEFMPKGSLENHLF-RRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNI 223
LV+E M GS+ +H+ RR L +V V A L FLH+ + +RD K NI
Sbjct: 88 LVFEKMRGGSILSHIHKRRHFNELEASV---VVQDVASALDFLHN--KGIAHRDLKPENI 142
Query: 224 LLDAEFN---AKLSDFGLAKAGP-TGDRTHVSTQVM----GTHGYAAPEYV-----ATGR 270
L + K+ DFGL GD + +ST + G+ Y APE V
Sbjct: 143 LCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASI 202
Query: 271 LTTKSDVYSFGVVLLELLS------GRCAVD 295
+ D++S GV+L LLS GRC D
Sbjct: 203 YDKRCDLWSLGVILYILLSGYPPFVGRCGSD 233
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 100/241 (41%), Gaps = 57/241 (23%)
Query: 83 NFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKE-----WLT 137
+F ++LG+G FG V K +++L A+KK++ H E L+
Sbjct: 7 DFEEIAVLGQGAFGQVVKA---RNALD------SRYYAIKKIR------HTEEKLSTILS 51
Query: 138 EVNYLGQLHHPNLVKLIGYCLEGEN-------------RLLVYEFMPKGSLENHLFRRG- 183
EV L L+H +V+ LE N + E+ +L + +
Sbjct: 52 EVXLLASLNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENL 111
Query: 184 --PQPLSWAVRMKVAIGAAKGLTFLHDAESQ-VIYRDFKASNILLDAEFNAKLSDFGLAK 240
+ W + ++ + L+++H SQ +I+R+ K NI +D N K+ DFGLAK
Sbjct: 112 NQQRDEYWRLFRQIL----EALSYIH---SQGIIHRNLKPXNIFIDESRNVKIGDFGLAK 164
Query: 241 -AGPTGDRTHVSTQ-----------VMGTHGYAAPEYV-ATGRLTTKSDVYSFGVVLLEL 287
+ D + +Q +GT Y A E + TG K D YS G++ E
Sbjct: 165 NVHRSLDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEX 224
Query: 288 L 288
+
Sbjct: 225 I 225
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 86/204 (42%), Gaps = 16/204 (7%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
LG+G F V + + + + ++ KKL + H++ E L HPN
Sbjct: 30 LGKGAFSVVRRCV----KVLAGQEYAAKIINTKKLSA---RDHQKLEREARICRLLKHPN 82
Query: 150 LVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDA 209
+V+L E + L+++ + G L + R + A I A LH
Sbjct: 83 IVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEA----VLHCH 138
Query: 210 ESQVIYRDFKASNILLDAEFN---AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYV 266
+ V++RD K N+LL ++ KL+DFGLA + GT GY +PE +
Sbjct: 139 QMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFG--FAGTPGYLSPEVL 196
Query: 267 ATGRLTTKSDVYSFGVVLLELLSG 290
D+++ GV+L LL G
Sbjct: 197 RKDPYGKPVDLWACGVILYILLVG 220
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 90/203 (44%), Gaps = 17/203 (8%)
Query: 96 GFVYKGWIDQHSLSPAK----PGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLV 151
G+V K I S S K + M AVK + +E + Y GQ HPN++
Sbjct: 28 GYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRY-GQ--HPNII 84
Query: 152 KLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAES 211
L +G++ LV E M G L + + R+ A + IG K + +LH
Sbjct: 85 TLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIG--KTVEYLH--SQ 140
Query: 212 QVIYRDFKASNIL-LDAEFN---AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVA 267
V++RD K SNIL +D N ++ DFG AK + ++ T + APE +
Sbjct: 141 GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY--TANFVAPEVLK 198
Query: 268 TGRLTTKSDVYSFGVVLLELLSG 290
D++S G++L +L+G
Sbjct: 199 RQGYDEGCDIWSLGILLYTMLAG 221
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 72/157 (45%), Gaps = 11/157 (7%)
Query: 138 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 197
EV+ L Q+ H N++ L + +L+ E + G L + L ++ + LS
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIK 122
Query: 198 GAAKGLTFLHDAESQVIYRDFKASNI-LLDAEF---NAKLSDFGLAKAGPTGDRTHVSTQ 253
G+ +LH ++ + D K NI LLD + KL DFGLA G
Sbjct: 123 QILDGVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KN 177
Query: 254 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+ GT + APE V L ++D++S GV+ LLSG
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 72/157 (45%), Gaps = 11/157 (7%)
Query: 138 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 197
EV+ L Q+ H N++ L + +L+ E + G L + L ++ + LS
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIK 122
Query: 198 GAAKGLTFLHDAESQVIYRDFKASNI-LLDAEF---NAKLSDFGLAKAGPTGDRTHVSTQ 253
G+ +LH ++ + D K NI LLD + KL DFGLA G
Sbjct: 123 QILDGVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KN 177
Query: 254 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+ GT + APE V L ++D++S GV+ LLSG
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 90/211 (42%), Gaps = 26/211 (12%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLT------EVNYLG 143
LG G F V K + +G+ A K +K + + ++ EV+ L
Sbjct: 20 LGSGQFAIVKKC---------REKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILR 70
Query: 144 QLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGL 203
Q+ H N++ L + +L+ E + G L + L ++ + LS G+
Sbjct: 71 QVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGV 128
Query: 204 TFLHDAESQVIYRDFKASNI-LLDAEF---NAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 259
+LH ++ + D K NI LLD + KL DFGLA G + GT
Sbjct: 129 NYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KNIFGTPE 183
Query: 260 YAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+ APE V L ++D++S GV+ LLSG
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 72/157 (45%), Gaps = 11/157 (7%)
Query: 138 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 197
EV+ L Q+ H N++ L + +L+ E + G L + L ++ + LS
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIK 122
Query: 198 GAAKGLTFLHDAESQVIYRDFKASNI-LLDAEF---NAKLSDFGLAKAGPTGDRTHVSTQ 253
G+ +LH ++ + D K NI LLD + KL DFGLA G
Sbjct: 123 QILDGVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KN 177
Query: 254 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+ GT + APE V L ++D++S GV+ LLSG
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 90/211 (42%), Gaps = 26/211 (12%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLT------EVNYLG 143
LG G F V K + +G+ A K +K + + ++ EV+ L
Sbjct: 20 LGSGQFAIVKKC---------REKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILR 70
Query: 144 QLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGL 203
Q+ H N++ L + +L+ E + G L + L ++ + LS G+
Sbjct: 71 QVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGV 128
Query: 204 TFLHDAESQVIYRDFKASNI-LLDAEF---NAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 259
+LH ++ + D K NI LLD + KL DFGLA G + GT
Sbjct: 129 NYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KNIFGTPE 183
Query: 260 YAAPEYVATGRLTTKSDVYSFGVVLLELLSG 290
+ APE V L ++D++S GV+ LLSG
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 75/166 (45%), Gaps = 23/166 (13%)
Query: 130 QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSW 189
G +W+T ++Y Q +L ++ Y + G+ L+ +F K + F G
Sbjct: 130 NGDCQWITALHYAFQ-DENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIG------ 182
Query: 190 AVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTH 249
M +AI + L ++H RD K N+LLD + +L+DFG + D T
Sbjct: 183 --EMVLAIDSIHQLHYVH--------RDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTV 231
Query: 250 VSTQVMGTHGYAAPEYV-----ATGRLTTKSDVYSFGVVLLELLSG 290
S+ +GT Y +PE + G+ + D +S GV + E+L G
Sbjct: 232 QSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYG 277
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 62/130 (47%), Gaps = 8/130 (6%)
Query: 164 LLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNI 223
L+V E + G L + + RG Q + ++ + + +LH + +RD K N+
Sbjct: 89 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPENL 146
Query: 224 LLDAEF-NA--KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSF 280
L ++ NA KL+DFG AK + + T+ T Y APE + + D++S
Sbjct: 147 LYTSKRPNAILKLTDFGFAKETTSHNSL---TEPCYTPYYVAPEVLGPEKYDKSCDMWSL 203
Query: 281 GVVLLELLSG 290
GV++ LL G
Sbjct: 204 GVIMYILLCG 213
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 67/127 (52%), Gaps = 13/127 (10%)
Query: 201 KGLTFLHDAESQVIYRDFKASNILLDAEF---NAKLSDFGLAKAGPTGDRTHVSTQVMGT 257
+G+ +LH ++ +++ D K NILL + + + K+ DFG+++ G + ++MGT
Sbjct: 142 EGVYYLH--QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSR--KIGHACELR-EIMGT 196
Query: 258 HGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAV-----DKTKVGIEQSLVDWAKPY 312
Y APE + +TT +D+++ G++ LL+ +T + I Q VD+++
Sbjct: 197 PEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEET 256
Query: 313 LSDKRKL 319
S +L
Sbjct: 257 FSSVSQL 263
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 90/203 (44%), Gaps = 17/203 (8%)
Query: 96 GFVYKGWIDQHSLSPAK----PGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLV 151
G+V K I S S K + M AVK + +E + Y GQ HPN++
Sbjct: 28 GYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRY-GQ--HPNII 84
Query: 152 KLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAES 211
L +G++ LV E M G L + + R+ A + IG K + +LH
Sbjct: 85 TLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIG--KTVEYLH--SQ 140
Query: 212 QVIYRDFKASNIL-LDAEFN---AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVA 267
V++RD K SNIL +D N ++ DFG AK + ++ T + APE +
Sbjct: 141 GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY--TANFVAPEVLK 198
Query: 268 TGRLTTKSDVYSFGVVLLELLSG 290
D++S G++L +L+G
Sbjct: 199 RQGYDEGCDIWSLGILLYTMLAG 221
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 75/166 (45%), Gaps = 23/166 (13%)
Query: 130 QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSW 189
G +W+T ++Y Q +L ++ Y + G+ L+ +F K + F G
Sbjct: 146 NGDCQWITALHYAFQ-DENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIG------ 198
Query: 190 AVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTH 249
M +AI + L ++H RD K N+LLD + +L+DFG + D T
Sbjct: 199 --EMVLAIDSIHQLHYVH--------RDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTV 247
Query: 250 VSTQVMGTHGYAAPEYV-----ATGRLTTKSDVYSFGVVLLELLSG 290
S+ +GT Y +PE + G+ + D +S GV + E+L G
Sbjct: 248 QSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYG 293
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 93/230 (40%), Gaps = 37/230 (16%)
Query: 78 KTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWL- 136
+T R+ +G+G +G V++G G VAVK + K W
Sbjct: 4 RTVARDITLLECVGKGRYGEVWRG-----------SWQGENVAVKIFSS---RDEKSWFR 49
Query: 137 -TEVNYLGQLHHPNLVKLIGYCLEGENR----LLVYEFMPKGSLENHLFRRGPQPLSWAV 191
TE+ L H N++ I + + L+ + GSL ++L +S
Sbjct: 50 ETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVS--- 106
Query: 192 RMKVAIGAAKGLTFLH------DAESQVIYRDFKASNILLDAEFNAKLSDFGLA--KAGP 243
+++ + A GL LH + + +RD K+ NIL+ ++D GLA +
Sbjct: 107 CLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQS 166
Query: 244 TGDRTHVSTQVMGTHGYAAPEY------VATGRLTTKSDVYSFGVVLLEL 287
T + +GT Y APE V + D+++FG+VL E+
Sbjct: 167 TNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 11/131 (8%)
Query: 164 LLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNI 223
L++ E M G L + + RG Q + ++ + FLH + +RD K N+
Sbjct: 83 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLH--SHNIAHRDVKPENL 140
Query: 224 LLDA-EFNA--KLSDFGLAKAGPTGDRTHVSTQV-MGTHGYAAPEYVATGRLTTKSDVYS 279
L + E +A KL+DFG AK + T + Q T Y APE + + D++S
Sbjct: 141 LYTSKEKDAVLKLTDFGFAK-----ETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWS 195
Query: 280 FGVVLLELLSG 290
GV++ LL G
Sbjct: 196 LGVIMYILLCG 206
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 11/131 (8%)
Query: 164 LLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNI 223
L++ E M G L + + RG Q + ++ + FLH + +RD K N+
Sbjct: 102 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLH--SHNIAHRDVKPENL 159
Query: 224 LLDA-EFNA--KLSDFGLAKAGPTGDRTHVSTQV-MGTHGYAAPEYVATGRLTTKSDVYS 279
L + E +A KL+DFG AK + T + Q T Y APE + + D++S
Sbjct: 160 LYTSKEKDAVLKLTDFGFAK-----ETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWS 214
Query: 280 FGVVLLELLSG 290
GV++ LL G
Sbjct: 215 LGVIMYILLCG 225
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 8/93 (8%)
Query: 201 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 260
+GL ++H A +I+RD K SN+ ++ + ++ DFGLA+ +V+T+ Y
Sbjct: 134 RGLKYIHSA--GIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATR-----WY 186
Query: 261 AAPEYVATGRLTTKS-DVYSFGVVLLELLSGRC 292
APE + ++ D++S G ++ ELL G+
Sbjct: 187 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKA 219
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 85/204 (41%), Gaps = 16/204 (7%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
+G+G F V + L + ++ KKL + H++ E L H N
Sbjct: 12 IGKGAFSVVRRCV----KLCTGHEYAAKIINTKKLSA---RDHQKLEREARICRLLKHSN 64
Query: 150 LVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDA 209
+V+L E LV++ + G L + R + A I A LH
Sbjct: 65 IVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEA----VLHCH 120
Query: 210 ESQVIYRDFKASNILLDAEFN---AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYV 266
+ V++RD K N+LL ++ KL+DFGLA GD+ GT GY +PE +
Sbjct: 121 QMGVVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGDQ-QAWFGFAGTPGYLSPEVL 178
Query: 267 ATGRLTTKSDVYSFGVVLLELLSG 290
D+++ GV+L LL G
Sbjct: 179 RKEAYGKPVDIWACGVILYILLVG 202
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 62/130 (47%), Gaps = 8/130 (6%)
Query: 164 LLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNI 223
L+V E + G L + + RG Q + ++ + + +LH + +RD K N+
Sbjct: 135 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPENL 192
Query: 224 LLDAEF-NA--KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSF 280
L ++ NA KL+DFG AK T ++T T Y APE + + D++S
Sbjct: 193 LYTSKRPNAILKLTDFGFAKE--TTSHNSLTTPCY-TPYYVAPEVLGPEKYDKSCDMWSL 249
Query: 281 GVVLLELLSG 290
GV++ LL G
Sbjct: 250 GVIMYILLCG 259
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 62/130 (47%), Gaps = 8/130 (6%)
Query: 164 LLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNI 223
L+V E + G L + + RG Q + ++ + + +LH + +RD K N+
Sbjct: 91 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPENL 148
Query: 224 LLDAEF-NA--KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSF 280
L ++ NA KL+DFG AK T ++T T Y APE + + D++S
Sbjct: 149 LYTSKRPNAILKLTDFGFAKE--TTSHNSLTTPCY-TPYYVAPEVLGPEKYDKSCDMWSL 205
Query: 281 GVVLLELLSG 290
GV++ LL G
Sbjct: 206 GVIMYILLCG 215
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 8/93 (8%)
Query: 201 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 260
+GL ++H A +I+RD K SN+ ++ + ++ DFGLA+ +V+T+ Y
Sbjct: 142 RGLKYIHSA--GIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----WY 194
Query: 261 AAPEYVATGRLTTKS-DVYSFGVVLLELLSGRC 292
APE + ++ D++S G ++ ELL G+
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKA 227
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 8/93 (8%)
Query: 201 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 260
+GL ++H A +I+RD K SN+ ++ + ++ DFGLA+ +V+T+ Y
Sbjct: 142 RGLKYIHSA--GIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----WY 194
Query: 261 AAPEYVATGRLTTKS-DVYSFGVVLLELLSGRC 292
APE + ++ D++S G ++ ELL G+
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKA 227
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 62/130 (47%), Gaps = 8/130 (6%)
Query: 164 LLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNI 223
L+V E + G L + + RG Q + ++ + + +LH + +RD K N+
Sbjct: 141 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPENL 198
Query: 224 LLDAEF-NA--KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSF 280
L ++ NA KL+DFG AK T ++T T Y APE + + D++S
Sbjct: 199 LYTSKRPNAILKLTDFGFAKE--TTSHNSLTTPCY-TPYYVAPEVLGPEKYDKSCDMWSL 255
Query: 281 GVVLLELLSG 290
GV++ LL G
Sbjct: 256 GVIMYILLCG 265
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 62/130 (47%), Gaps = 8/130 (6%)
Query: 164 LLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNI 223
L+V E + G L + + RG Q + ++ + + +LH + +RD K N+
Sbjct: 95 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPENL 152
Query: 224 LLDAEF-NA--KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSF 280
L ++ NA KL+DFG AK T ++T T Y APE + + D++S
Sbjct: 153 LYTSKRPNAILKLTDFGFAKE--TTSHNSLTTPCY-TPYYVAPEVLGPEKYDKSCDMWSL 209
Query: 281 GVVLLELLSG 290
GV++ LL G
Sbjct: 210 GVIMYILLCG 219
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 62/130 (47%), Gaps = 8/130 (6%)
Query: 164 LLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNI 223
L+V E + G L + + RG Q + ++ + + +LH + +RD K N+
Sbjct: 89 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPENL 146
Query: 224 LLDAEF-NA--KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSF 280
L ++ NA KL+DFG AK T ++T T Y APE + + D++S
Sbjct: 147 LYTSKRPNAILKLTDFGFAKE--TTSHNSLTTPCY-TPYYVAPEVLGPEKYDKSCDMWSL 203
Query: 281 GVVLLELLSG 290
GV++ LL G
Sbjct: 204 GVIMYILLCG 213
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 62/130 (47%), Gaps = 8/130 (6%)
Query: 164 LLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNI 223
L+V E + G L + + RG Q + ++ + + +LH + +RD K N+
Sbjct: 97 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPENL 154
Query: 224 LLDAEF-NA--KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSF 280
L ++ NA KL+DFG AK T ++T T Y APE + + D++S
Sbjct: 155 LYTSKRPNAILKLTDFGFAKE--TTSHNSLTTPCY-TPYYVAPEVLGPEKYDKSCDMWSL 211
Query: 281 GVVLLELLSG 290
GV++ LL G
Sbjct: 212 GVIMYILLCG 221
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 62/130 (47%), Gaps = 8/130 (6%)
Query: 164 LLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNI 223
L+V E + G L + + RG Q + ++ + + +LH + +RD K N+
Sbjct: 105 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPENL 162
Query: 224 LLDAEF-NA--KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSF 280
L ++ NA KL+DFG AK T ++T T Y APE + + D++S
Sbjct: 163 LYTSKRPNAILKLTDFGFAKE--TTSHNSLTTPCY-TPYYVAPEVLGPEKYDKSCDMWSL 219
Query: 281 GVVLLELLSG 290
GV++ LL G
Sbjct: 220 GVIMYILLCG 229
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 62/130 (47%), Gaps = 8/130 (6%)
Query: 164 LLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNI 223
L+V E + G L + + RG Q + ++ + + +LH + +RD K N+
Sbjct: 96 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPENL 153
Query: 224 LLDAEF-NA--KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSF 280
L ++ NA KL+DFG AK T ++T T Y APE + + D++S
Sbjct: 154 LYTSKRPNAILKLTDFGFAKE--TTSHNSLTTPCY-TPYYVAPEVLGPEKYDKSCDMWSL 210
Query: 281 GVVLLELLSG 290
GV++ LL G
Sbjct: 211 GVIMYILLCG 220
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 98/216 (45%), Gaps = 27/216 (12%)
Query: 89 LLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLH-H 147
LLGEG + V Q ++S +G AVK ++ + EV L Q +
Sbjct: 20 LLGEGAYAKV------QGAVSLQ---NGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGN 70
Query: 148 PNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLH 207
N+++LI + + LV+E + GS+ H+ ++ A R+ + AA L FLH
Sbjct: 71 KNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAA--LDFLH 128
Query: 208 DAESQVIYRDFKASNILLDAEFNA---KLSDFGLAKAGPTGDR-THVSTQVM----GTHG 259
+ +RD K NIL ++ K+ DF L + T ++T + G+
Sbjct: 129 --TKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAE 186
Query: 260 YAAPEYVA--TGRLT---TKSDVYSFGVVLLELLSG 290
Y APE V T + T + D++S GVVL +LSG
Sbjct: 187 YMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSG 222
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 62/130 (47%), Gaps = 8/130 (6%)
Query: 164 LLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNI 223
L+V E + G L + + RG Q + ++ + + +LH + +RD K N+
Sbjct: 91 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPENL 148
Query: 224 LLDAEF-NA--KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSF 280
L ++ NA KL+DFG AK T ++T T Y APE + + D++S
Sbjct: 149 LYTSKRPNAILKLTDFGFAKE--TTSHNSLTTPCY-TPYYVAPEVLGPEKYDKSCDMWSL 205
Query: 281 GVVLLELLSG 290
GV++ LL G
Sbjct: 206 GVIMYILLCG 215
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 62/130 (47%), Gaps = 8/130 (6%)
Query: 164 LLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNI 223
L+V E + G L + + RG Q + ++ + + +LH + +RD K N+
Sbjct: 90 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPENL 147
Query: 224 LLDAEF-NA--KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSF 280
L ++ NA KL+DFG AK T ++T T Y APE + + D++S
Sbjct: 148 LYTSKRPNAILKLTDFGFAKE--TTSHNSLTTPCY-TPYYVAPEVLGPEKYDKSCDMWSL 204
Query: 281 GVVLLELLSG 290
GV++ LL G
Sbjct: 205 GVIMYILLCG 214
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 92/230 (40%), Gaps = 37/230 (16%)
Query: 78 KTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWL- 136
+T R +G+G +G V++G G VAVK + K W
Sbjct: 33 RTVARQITLLECVGKGRYGEVWRG-----------SWQGENVAVKIFSS---RDEKSWFR 78
Query: 137 -TEVNYLGQLHHPNLVKLIGYCLEGENR----LLVYEFMPKGSLENHLFRRGPQPLSWAV 191
TE+ L H N++ I + + L+ + GSL ++L +S
Sbjct: 79 ETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVS--- 135
Query: 192 RMKVAIGAAKGLTFLH------DAESQVIYRDFKASNILLDAEFNAKLSDFGLA--KAGP 243
+++ + A GL LH + + +RD K+ NIL+ ++D GLA +
Sbjct: 136 CLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQS 195
Query: 244 TGDRTHVSTQVMGTHGYAAPEY------VATGRLTTKSDVYSFGVVLLEL 287
T + +GT Y APE V + D+++FG+VL E+
Sbjct: 196 TNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 67/151 (44%), Gaps = 25/151 (16%)
Query: 165 LVYEFMPKGSLENHLF-RRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNI 223
LV+E M GS+ +H+ RR L +V V A L FLH+ + +RD K NI
Sbjct: 88 LVFEKMRGGSILSHIHKRRHFNELEASV---VVQDVASALDFLHN--KGIAHRDLKPENI 142
Query: 224 LLDAEFN---AKLSDFGLAKAGP-TGDRTHVSTQVM----GTHGYAAPEYV-----ATGR 270
L + K+ DF L GD + +ST + G+ Y APE V
Sbjct: 143 LCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASI 202
Query: 271 LTTKSDVYSFGVVLLELLS------GRCAVD 295
+ D++S GV+L LLS GRC D
Sbjct: 203 YDKRCDLWSLGVILYILLSGYPPFVGRCGSD 233
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 105/265 (39%), Gaps = 29/265 (10%)
Query: 147 HPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFL 206
HPN++ L +G+ +V E G L + + R+ + S V K + +L
Sbjct: 75 HPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQ--KFFSEREASAVLFTITKTVEYL 132
Query: 207 HDAESQVIYRDFKASNIL-LDAEFN---AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAA 262
H V++RD K SNIL +D N ++ DFG AK + + T T + A
Sbjct: 133 H--AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQ-LRAENGLLXTPCY-TANFVA 188
Query: 263 PEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRI 322
PE + D++S GV+L L+G P + + L RI
Sbjct: 189 PEVLERQGYDAACDIWSLGVLLYTXLTGYTPFAN-------------GPDDTPEEILARI 235
Query: 323 MDTK--LGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLA---ILERLEAPKNSAKLS 377
K L G Y + TA L + L+ +P R + VL I+ + P+
Sbjct: 236 GSGKFSLSGGYWNSVSDTAKDLVSKXLHVDPHQRLTAALVLRHPWIVHWDQLPQYQLN-R 294
Query: 378 QSEPHRQTGPVTVRKSPMRQQRSPL 402
Q PH G S + + +SP+
Sbjct: 295 QDAPHLVKGAXAATYSALNRNQSPV 319
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 86/204 (42%), Gaps = 16/204 (7%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
LG+G F V + + + + ++ KKL + H++ E L HPN
Sbjct: 12 LGKGAFSVVRRC----MKIPTGQEYAAKIINTKKLSA---RDHQKLEREARICRLLKHPN 64
Query: 150 LVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDA 209
+V+L E LV++ + G L + R + A I + L+
Sbjct: 65 IVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNG- 123
Query: 210 ESQVIYRDFKASNILLDAEFN---AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYV 266
+++RD K N+LL ++ KL+DFGLA GD+ GT GY +PE +
Sbjct: 124 ---IVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQ-QAWFGFAGTPGYLSPEVL 178
Query: 267 ATGRLTTKSDVYSFGVVLLELLSG 290
D+++ GV+L LL G
Sbjct: 179 RKDPYGKPVDMWACGVILYILLVG 202
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 8/130 (6%)
Query: 164 LLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNI 223
L+V E + G L + + RG Q + ++ + + +LH + +RD K N+
Sbjct: 135 LIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSI--NIAHRDVKPENL 192
Query: 224 LLDAEF-NA--KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSF 280
L ++ NA KL+DFG AK T ++T T Y APE + + D +S
Sbjct: 193 LYTSKRPNAILKLTDFGFAKE--TTSHNSLTTPCY-TPYYVAPEVLGPEKYDKSCDXWSL 249
Query: 281 GVVLLELLSG 290
GV+ LL G
Sbjct: 250 GVIXYILLCG 259
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 71/167 (42%), Gaps = 21/167 (12%)
Query: 133 KEWLTEVNYLGQLHHPNLVKLIGYCLEGEN-----RLLVYEFMPKG---SLENHLFRRGP 184
K L E+ L HHPN++ L + E LV E M + + P
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISP 133
Query: 185 QPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPT 244
Q + + + + GL LH E+ V++RD NILL + + DF LA+
Sbjct: 134 QHIQYFMYHILL-----GLHVLH--EAGVVHRDLHPGNILLADNNDITICDFNLAREDTA 186
Query: 245 -GDRTHVSTQVMGTHGYAAPEYVATGRLTTK-SDVYSFGVVLLELLS 289
++TH T Y APE V + TK D++S G V+ E+ +
Sbjct: 187 DANKTHYVTH----RWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFN 229
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 87/205 (42%), Gaps = 30/205 (14%)
Query: 138 EVNYLGQLHHPNLVKLIGYCLEGENR--LLVYEFMPKGSLENHLFRRG------PQPLSW 189
E+ L +L HPN++ L L +R L++++ F R P L
Sbjct: 68 EIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPR 127
Query: 190 AVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAE----FNAKLSDFGLAK----- 240
+ + G+ +LH + V++RD K +NIL+ E K++D G A+
Sbjct: 128 GMVKSLLYQILDGIHYLH--ANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSP 185
Query: 241 AGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKV 299
P D V+ T Y APE + R TK+ D+++ G + ELL+ +
Sbjct: 186 LKPLADL----DPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE 241
Query: 300 GIEQSLVDWAKPYLSDK-RKLFRIM 323
I+ S PY D+ ++F +M
Sbjct: 242 DIKTS-----NPYHHDQLDRIFNVM 261
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 71/167 (42%), Gaps = 21/167 (12%)
Query: 133 KEWLTEVNYLGQLHHPNLVKLIGYCLEGEN-----RLLVYEFMPKG---SLENHLFRRGP 184
K L E+ L HHPN++ L + E LV E M + + P
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISP 133
Query: 185 QPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPT 244
Q + + + + GL LH E+ V++RD NILL + + DF LA+
Sbjct: 134 QHIQYFMYHILL-----GLHVLH--EAGVVHRDLHPGNILLADNNDITICDFNLAREDTA 186
Query: 245 -GDRTHVSTQVMGTHGYAAPEYVATGRLTTK-SDVYSFGVVLLELLS 289
++TH T Y APE V + TK D++S G V+ E+ +
Sbjct: 187 DANKTHYVTH----RWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFN 229
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 89/218 (40%), Gaps = 37/218 (16%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWL--TEVNYLGQLHH 147
+G+G +G V++G G VAVK + K W TE+ L H
Sbjct: 16 VGKGRYGEVWRG-----------SWQGENVAVKIFSS---RDEKSWFRETELYNTVMLRH 61
Query: 148 PNLVKLIGYCLEGENR----LLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGL 203
N++ I + + L+ + GSL ++L +S +++ + A GL
Sbjct: 62 ENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVS---CLRIVLSIASGL 118
Query: 204 TFLH------DAESQVIYRDFKASNILLDAEFNAKLSDFGLA--KAGPTGDRTHVSTQVM 255
LH + + +RD K+ NIL+ ++D GLA + T + +
Sbjct: 119 AHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV 178
Query: 256 GTHGYAAPEY------VATGRLTTKSDVYSFGVVLLEL 287
GT Y APE V + D+++FG+VL E+
Sbjct: 179 GTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 86/204 (42%), Gaps = 16/204 (7%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPN 149
LG+G F V + + + + ++ KKL + H++ E L HPN
Sbjct: 12 LGKGAFSVVRRC----MKIPTGQEYAAKIINTKKLSA---RDHQKLEREARICRLLKHPN 64
Query: 150 LVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDA 209
+V+L E LV++ + G L + R + A I + H
Sbjct: 65 IVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVN----HCH 120
Query: 210 ESQVIYRDFKASNILLDAEFN---AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYV 266
+ +++RD K N+LL ++ KL+DFGLA GD+ GT GY +PE +
Sbjct: 121 LNGIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQ-QAWFGFAGTPGYLSPEVL 178
Query: 267 ATGRLTTKSDVYSFGVVLLELLSG 290
D+++ GV+L LL G
Sbjct: 179 RKDPYGKPVDMWACGVILYILLVG 202
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 137/333 (41%), Gaps = 62/333 (18%)
Query: 78 KTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKL-KPEGFQGHKEWL 136
+T + + +G+G +G V+ G G VAVK E +E
Sbjct: 33 RTIAKQIQMVKQIGKGRYGEVWMG-----------KWRGEKVAVKVFFTTEEASWFRE-- 79
Query: 137 TEVNYLGQLHHPNLVKLIGYCLEGENRL----LVYEFMPKGSLENHLFRRGPQPLSWAVR 192
TE+ + H N++ I ++G L+ ++ GSL ++L L
Sbjct: 80 TEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYL---KSTTLDAKSM 136
Query: 193 MKVAIGAAKGLTFLH------DAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGD 246
+K+A + GL LH + + +RD K+ NIL+ ++D GLA D
Sbjct: 137 LKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VKFISD 195
Query: 247 RTHV----STQVMGTHGYAAPEYVATG------RLTTKSDVYSFGVVLLELLSGRCA--- 293
V +T+V GT Y PE + + +D+YSFG++L E ++ RC
Sbjct: 196 TNEVDIPPNTRV-GTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWE-VARRCVSGG 253
Query: 294 -VDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPK 352
V++ ++ LV + P D R++ I KL +P + + +CL K
Sbjct: 254 IVEEYQLPY-HDLVP-SDPSYEDMREIVCI--KKLRPSFPNRWSSD------ECLRQMGK 303
Query: 353 LRPRMSEVLA-----ILERLEAPKNSAKLSQSE 380
L M+E A L L K AK+S+S+
Sbjct: 304 L---MTECWAHNPASRLTALRVKKTLAKMSESQ 333
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 76/178 (42%), Gaps = 46/178 (25%)
Query: 147 HPNLVKLIGYCLEGENRLLVYEF------------MPKGSLENHLFRRGPQPLSWAVRMK 194
HPN+++ YC E +R L S EN ++ P+S ++
Sbjct: 68 HPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQI- 124
Query: 195 VAIGAAKGLTFLHDAESQVIYRDFKASNILLD--AEFNAK-----------LSDFGLAK- 240
A G+ LH ++I+RD K NIL+ + F A +SDFGL K
Sbjct: 125 -----ASGVAHLHSL--KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKK 177
Query: 241 --AGPTGDRTHVSTQVMGTHGYAAPEYVATG-------RLTTKSDVYSFGVVLLELLS 289
+G + RT+++ GT G+ APE + RLT D++S G V +LS
Sbjct: 178 LDSGQSSFRTNLNNPS-GTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 107/287 (37%), Gaps = 60/287 (20%)
Query: 89 LLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHP 148
LLG GGFG VY G + + VA+K ++ + +W N
Sbjct: 44 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRI---SDWGELPNGTRVPMEV 91
Query: 149 NLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAK---GLTF 205
L+K + G RLL + P + L P+P+ GA + +F
Sbjct: 92 VLLKKVSSGFSGVIRLLDWFERPDSFV---LILERPEPVQDLFDFITERGALQEELARSF 148
Query: 206 L--------HDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMG 256
H V++RD K NIL+D KL DFG +G T V T G
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDG 204
Query: 257 THGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSD 315
T Y+ PE++ R +S V+S G++L +++ G P+ D
Sbjct: 205 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI------------------PFEHD 246
Query: 316 KRKLFRIMDTKLGGQ--YPQKAAHTAATLALQCLNNEPKLRPRMSEV 360
+ +GGQ + Q+ + L CL P RP E+
Sbjct: 247 EE--------IIGGQVFFRQRVSXECQHLIRWCLALRPSDRPTFEEI 285
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 107/287 (37%), Gaps = 60/287 (20%)
Query: 89 LLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHP 148
LLG GGFG VY G + + VA+K ++ + +W N
Sbjct: 43 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRI---SDWGELPNGTRVPMEV 90
Query: 149 NLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAK---GLTF 205
L+K + G RLL + P + L P+P+ GA + +F
Sbjct: 91 VLLKKVSSGFSGVIRLLDWFERPDSFV---LILERPEPVQDLFDFITERGALQEELARSF 147
Query: 206 L--------HDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMG 256
H V++RD K NIL+D KL DFG +G T V T G
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDG 203
Query: 257 THGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSD 315
T Y+ PE++ R +S V+S G++L +++ G P+ D
Sbjct: 204 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI------------------PFEHD 245
Query: 316 KRKLFRIMDTKLGGQ--YPQKAAHTAATLALQCLNNEPKLRPRMSEV 360
+ +GGQ + Q+ + L CL P RP E+
Sbjct: 246 EE--------IIGGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEI 284
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 107/287 (37%), Gaps = 60/287 (20%)
Query: 89 LLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHP 148
LLG GGFG VY G + + VA+K ++ + +W N
Sbjct: 44 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRI---SDWGELPNGTRVPMEV 91
Query: 149 NLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAK---GLTF 205
L+K + G RLL + P + L P+P+ GA + +F
Sbjct: 92 VLLKKVSSGFSGVIRLLDWFERPDSFV---LILERPEPVQDLFDFITERGALQEELARSF 148
Query: 206 L--------HDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMG 256
H V++RD K NIL+D KL DFG +G T V T G
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDG 204
Query: 257 THGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSD 315
T Y+ PE++ R +S V+S G++L +++ G P+ D
Sbjct: 205 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI------------------PFEHD 246
Query: 316 KRKLFRIMDTKLGGQ--YPQKAAHTAATLALQCLNNEPKLRPRMSEV 360
+ +GGQ + Q+ + L CL P RP E+
Sbjct: 247 EE--------IIGGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEI 285
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 107/287 (37%), Gaps = 60/287 (20%)
Query: 89 LLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHP 148
LLG GGFG VY G + + VA+K ++ + +W N
Sbjct: 44 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRI---SDWGELPNGTRVPMEV 91
Query: 149 NLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAK---GLTF 205
L+K + G RLL + P + L P+P+ GA + +F
Sbjct: 92 VLLKKVSSGFSGVIRLLDWFERPDSFV---LILERPEPVQDLFDFITERGALQEELARSF 148
Query: 206 L--------HDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMG 256
H V++RD K NIL+D KL DFG +G T V T G
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDG 204
Query: 257 THGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSD 315
T Y+ PE++ R +S V+S G++L +++ G P+ D
Sbjct: 205 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI------------------PFEHD 246
Query: 316 KRKLFRIMDTKLGGQ--YPQKAAHTAATLALQCLNNEPKLRPRMSEV 360
+ +GGQ + Q+ + L CL P RP E+
Sbjct: 247 EE--------IIGGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEI 285
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 107/287 (37%), Gaps = 60/287 (20%)
Query: 89 LLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHP 148
LLG GGFG VY G + + VA+K ++ + +W N
Sbjct: 44 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRI---SDWGELPNGTRVPMEV 91
Query: 149 NLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAK---GLTF 205
L+K + G RLL + P + L P+P+ GA + +F
Sbjct: 92 VLLKKVSSGFSGVIRLLDWFERPDSFV---LILERPEPVQDLFDFITERGALQEELARSF 148
Query: 206 L--------HDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMG 256
H V++RD K NIL+D KL DFG +G T V T G
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDG 204
Query: 257 THGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSD 315
T Y+ PE++ R +S V+S G++L +++ G P+ D
Sbjct: 205 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI------------------PFEHD 246
Query: 316 KRKLFRIMDTKLGGQ--YPQKAAHTAATLALQCLNNEPKLRPRMSEV 360
+ +GGQ + Q+ + L CL P RP E+
Sbjct: 247 EE--------IIGGQVFFRQRVSXECQHLIRWCLALRPSDRPTFEEI 285
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 107/287 (37%), Gaps = 60/287 (20%)
Query: 89 LLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHP 148
LLG GGFG VY G + + VA+K ++ + +W N
Sbjct: 43 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRI---SDWGELPNGTRVPMEV 90
Query: 149 NLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAK---GLTF 205
L+K + G RLL + P + L P+P+ GA + +F
Sbjct: 91 VLLKKVSSGFSGVIRLLDWFERPDSFV---LILERPEPVQDLFDFITERGALQEELARSF 147
Query: 206 L--------HDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMG 256
H V++RD K NIL+D KL DFG +G T V T G
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDG 203
Query: 257 THGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSD 315
T Y+ PE++ R +S V+S G++L +++ G P+ D
Sbjct: 204 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI------------------PFEHD 245
Query: 316 KRKLFRIMDTKLGGQ--YPQKAAHTAATLALQCLNNEPKLRPRMSEV 360
+ +GGQ + Q+ + L CL P RP E+
Sbjct: 246 EE--------IIGGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEI 284
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 107/287 (37%), Gaps = 60/287 (20%)
Query: 89 LLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHP 148
LLG GGFG VY G + + VA+K ++ + +W N
Sbjct: 43 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRI---SDWGELPNGTRVPMEV 90
Query: 149 NLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAK---GLTF 205
L+K + G RLL + P + L P+P+ GA + +F
Sbjct: 91 VLLKKVSSGFSGVIRLLDWFERPDSFV---LILERPEPVQDLFDFITERGALQEELARSF 147
Query: 206 L--------HDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMG 256
H V++RD K NIL+D KL DFG +G T V T G
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDG 203
Query: 257 THGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSD 315
T Y+ PE++ R +S V+S G++L +++ G P+ D
Sbjct: 204 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI------------------PFEHD 245
Query: 316 KRKLFRIMDTKLGGQ--YPQKAAHTAATLALQCLNNEPKLRPRMSEV 360
+ +GGQ + Q+ + L CL P RP E+
Sbjct: 246 EE--------IIGGQVFFRQRVSXECQHLIRWCLALRPSDRPTFEEI 284
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 74/174 (42%), Gaps = 42/174 (24%)
Query: 147 HPNLVKLIGYCLEGENRLLVYEF------------MPKGSLENHLFRRGPQPLSWAVRMK 194
HPN+++ YC E +R L S EN ++ P+S ++
Sbjct: 86 HPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQI- 142
Query: 195 VAIGAAKGLTFLHDAESQVIYRDFKASNILLD--AEFNAK-----------LSDFGLAKA 241
A G+ LH ++I+RD K NIL+ + F A +SDFGL K
Sbjct: 143 -----ASGVAHLHSL--KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKK 195
Query: 242 GPTGD---RTHVSTQVMGTHGYAAPEYVATG---RLTTKSDVYSFGVVLLELLS 289
+G R +++ GT G+ APE + RLT D++S G V +LS
Sbjct: 196 LDSGQXXFRXNLNNPS-GTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILS 248
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 92/219 (42%), Gaps = 40/219 (18%)
Query: 89 LLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLT------EVNYL 142
LLG GGFG VY G + + VA+K ++ + E EV L
Sbjct: 15 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 65
Query: 143 GQLH--HPNLVKLIGYCLEGENRLLVYEFM-PKGSLENHLFRRGP------QPLSWAVRM 193
++ +++L+ + ++ +L+ E M P L + + RG + W V
Sbjct: 66 KKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVLE 125
Query: 194 KVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVST 252
V H V++RD K NIL+D KL DFG +G T V T
Sbjct: 126 AVR----------HCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYT 171
Query: 253 QVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSG 290
GT Y+ PE++ R +S V+S G++L +++ G
Sbjct: 172 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 210
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 74/174 (42%), Gaps = 42/174 (24%)
Query: 147 HPNLVKLIGYCLEGENRLLVYEF------------MPKGSLENHLFRRGPQPLSWAVRMK 194
HPN+++ YC E +R L S EN ++ P+S ++
Sbjct: 86 HPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQI- 142
Query: 195 VAIGAAKGLTFLHDAESQVIYRDFKASNILLD--AEFNAK-----------LSDFGLAKA 241
A G+ LH ++I+RD K NIL+ + F A +SDFGL K
Sbjct: 143 -----ASGVAHLHSL--KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKK 195
Query: 242 GPTGD---RTHVSTQVMGTHGYAAPEYVATG---RLTTKSDVYSFGVVLLELLS 289
+G R +++ GT G+ APE + RLT D++S G V +LS
Sbjct: 196 LDSGQXXFRXNLNNPS-GTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILS 248
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 111/296 (37%), Gaps = 78/296 (26%)
Query: 89 LLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHP 148
LLG GGFG VY G + + VA+K ++ + ++ G+L P
Sbjct: 11 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKD----------RISDWGEL--P 49
Query: 149 N---------LVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGA 199
N L+K + G RLL + P + L P+P+ GA
Sbjct: 50 NGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFV---LILERPEPVQDLFDFITERGA 106
Query: 200 AK---GLTFL--------HDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDR 247
+ +F H V++RD K NIL+D KL DFG +G
Sbjct: 107 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKD 163
Query: 248 THVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQSLV 306
T V T GT Y+ PE++ R +S V+S G++L +++ G
Sbjct: 164 T-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI-------------- 208
Query: 307 DWAKPYLSDKRKLFRIMDTKLGGQ--YPQKAAHTAATLALQCLNNEPKLRPRMSEV 360
P+ D+ +GGQ + Q+ + L CL P RP E+
Sbjct: 209 ----PFEHDEE--------IIGGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEI 252
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 64/149 (42%), Gaps = 10/149 (6%)
Query: 145 LHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLT 204
L HPN+V+ L + +V E+ G L + G A + G++
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL--ISGVS 129
Query: 205 FLHDAESQVIYRDFKASNILLDAE--FNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAA 262
+ H QV +RD K N LLD K++DFG +KA + +GT Y A
Sbjct: 130 YAH--AMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQ---PKSAVGTPAYIA 184
Query: 263 PEYVATGRLTTK-SDVYSFGVVLLELLSG 290
PE + K +DV+S GV L +L G
Sbjct: 185 PEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 63/149 (42%), Gaps = 10/149 (6%)
Query: 145 LHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLT 204
L HPN+V+ L + ++ E+ G L + G A + G++
Sbjct: 73 LRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQL--LSGVS 130
Query: 205 FLHDAESQVIYRDFKASNILLDAE--FNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAA 262
+ H Q+ +RD K N LLD K+ DFG +K+ + +GT Y A
Sbjct: 131 YCHSM--QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIA 185
Query: 263 PEYVATGRLTTK-SDVYSFGVVLLELLSG 290
PE + K +DV+S GV L +L G
Sbjct: 186 PEVLLRQEYDGKIADVWSCGVTLYVMLVG 214
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 89/216 (41%), Gaps = 40/216 (18%)
Query: 90 LGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLT---------EVN 140
LG G FGFV+ +D+ V VK +K E W+ E+
Sbjct: 32 LGSGAFGFVWTA-VDKEK--------NKEVVVKFIKKEKVL-EDCWIEDPKLGKVTLEIA 81
Query: 141 YLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFR------RGPQPL-SWAVRM 193
L ++ H N++K++ EN+ M K LF R +PL S+ R
Sbjct: 82 ILSRVEHANIIKVLDIF---ENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQ 138
Query: 194 KVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 253
V+ A G L D +I+RD K NI++ +F KL DFG + +R +
Sbjct: 139 LVS---AVGYLRLKD----IIHRDIKDENIVIAEDFTIKLIDFG---SAAYLERGKLFYT 188
Query: 254 VMGTHGYAAPEYVATGRLTT-KSDVYSFGVVLLELL 288
GT Y APE + + +++S GV L L+
Sbjct: 189 FCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLV 224
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 63/149 (42%), Gaps = 10/149 (6%)
Query: 145 LHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLT 204
L HPN+V+ L + +V E+ G L + G A + G++
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL--ISGVS 129
Query: 205 FLHDAESQVIYRDFKASNILLDAE--FNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAA 262
+ H QV +RD K N LLD K+ DFG +K+ + +GT Y A
Sbjct: 130 YCH--AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIA 184
Query: 263 PEYVATGRLTTK-SDVYSFGVVLLELLSG 290
PE + K +DV+S GV L +L G
Sbjct: 185 PEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 76/179 (42%), Gaps = 11/179 (6%)
Query: 115 SGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGS 174
S +VAVK ++ G + + E+ L HPN+V+ L + +V E+ G
Sbjct: 42 SNELVAVKYIE-RGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGE 100
Query: 175 LENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAE--FNAK 232
L + G A + G+++ H QV +RD K N LLD K
Sbjct: 101 LFERICNAGRFSEDEARFFFQQL--ISGVSYCH--AMQVCHRDLKLENTLLDGSPAPRLK 156
Query: 233 LSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTK-SDVYSFGVVLLELLSG 290
+ DFG +K+ + +GT Y APE + K +DV+S GV L +L G
Sbjct: 157 ICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 212
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 79/185 (42%), Gaps = 15/185 (8%)
Query: 111 AKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFM 170
+ G+ + A KK+ + + E+ + L HPN+++L + + LV E
Sbjct: 29 VQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELC 88
Query: 171 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILL---DA 227
G L + + S A R+ + +A + + H + V +RD K N L
Sbjct: 89 TGGELFERVVHKRVFRESDAARIMKDVLSA--VAYCH--KLNVAHRDLKPENFLFLTDSP 144
Query: 228 EFNAKLSDFGLAKAGPTGD--RTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLL 285
+ KL DFGLA G RT V GT Y +P+ V G + D +S GV++
Sbjct: 145 DSPLKLIDFGLAARFKPGKMMRTKV-----GTPYYVSPQ-VLEGLYGPECDEWSAGVMMY 198
Query: 286 ELLSG 290
LL G
Sbjct: 199 VLLCG 203
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 127/310 (40%), Gaps = 60/310 (19%)
Query: 89 LLGEGGFGFVYKG-WIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHH 147
L+G+G FG VY G W + ++ ++ +++ + + K EV Q H
Sbjct: 40 LIGKGRFGQVYHGRWHGEVAIR--------LIDIERDNEDQLKAFKR---EVMAYRQTRH 88
Query: 148 PNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLH 207
N+V +G C+ + L + + KG + R L ++A KG+ +LH
Sbjct: 89 ENVVLFMGACMSPPH-LAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH 147
Query: 208 DAESQVIYRDFKASNILLDAEFNAK--LSDFGL------AKAGPTGDRTHVSTQVMGTHG 259
++++D K+ N+ D N K ++DFGL +AG D+ + G
Sbjct: 148 --AKGILHKDLKSKNVFYD---NGKVVITDFGLFSISGVLQAGRREDKLRIQN---GWLC 199
Query: 260 YAAPEYVATGR---------LTTKSDVYSFGVVLLELLSGRCAVDKTK--VGIEQSLVDW 308
+ APE + + SDV++ G + E L R KT+ I +
Sbjct: 200 HLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYE-LHAREWPFKTQPAEAIIWQMGTG 258
Query: 309 AKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLE 368
KP LS ++G + + L C E + RP ++++ +LE+L
Sbjct: 259 MKPNLS-----------QIG------MGKEISDILLFCWAFEQEERPTFTKLMDMLEKL- 300
Query: 369 APKNSAKLSQ 378
PK + +LS
Sbjct: 301 -PKRNRRLSH 309
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 87/215 (40%), Gaps = 32/215 (14%)
Query: 89 LLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHP 148
LLG GGFG VY G + + VA+K ++ + +W N
Sbjct: 43 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRI---SDWGELPNGTRVPMEV 90
Query: 149 NLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAK---GLTF 205
L+K + G RLL + P + L P+P+ GA + +F
Sbjct: 91 VLLKKVSSGFSGVIRLLDWFERPDSFV---LILERPEPVQDLFDFITERGALQEELARSF 147
Query: 206 L--------HDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMG 256
H V++RD K NIL+D KL DFG +G T V T G
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDG 203
Query: 257 THGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSG 290
T Y+ PE++ R +S V+S G++L +++ G
Sbjct: 204 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 87/215 (40%), Gaps = 32/215 (14%)
Query: 89 LLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHP 148
LLG GGFG VY G + + VA+K ++ + +W N
Sbjct: 30 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRI---SDWGELPNGTRVPMEV 77
Query: 149 NLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAK---GLTF 205
L+K + G RLL + P + L P+P+ GA + +F
Sbjct: 78 VLLKKVSSGFSGVIRLLDWFERPDSFV---LILERPEPVQDLFDFITERGALQEELARSF 134
Query: 206 L--------HDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMG 256
H V++RD K NIL+D KL DFG +G T V T G
Sbjct: 135 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDG 190
Query: 257 THGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSG 290
T Y+ PE++ R +S V+S G++L +++ G
Sbjct: 191 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 79/185 (42%), Gaps = 15/185 (8%)
Query: 111 AKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFM 170
+ G+ + A KK+ + + E+ + L HPN+++L + + LV E
Sbjct: 46 VQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELC 105
Query: 171 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILL---DA 227
G L + + S A R+ + +A + + H + V +RD K N L
Sbjct: 106 TGGELFERVVHKRVFRESDAARIMKDVLSA--VAYCH--KLNVAHRDLKPENFLFLTDSP 161
Query: 228 EFNAKLSDFGLAKAGPTGD--RTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLL 285
+ KL DFGLA G RT V GT Y +P+ V G + D +S GV++
Sbjct: 162 DSPLKLIDFGLAARFKPGKMMRTKV-----GTPYYVSPQ-VLEGLYGPECDEWSAGVMMY 215
Query: 286 ELLSG 290
LL G
Sbjct: 216 VLLCG 220
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 87/215 (40%), Gaps = 32/215 (14%)
Query: 89 LLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHP 148
LLG GGFG VY G + + VA+K ++ + +W N
Sbjct: 30 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRI---SDWGELPNGTRVPMEV 77
Query: 149 NLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAK---GLTF 205
L+K + G RLL + P + L P+P+ GA + +F
Sbjct: 78 VLLKKVSSGFSGVIRLLDWFERPDSFV---LILERPEPVQDLFDFITERGALQEELARSF 134
Query: 206 L--------HDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMG 256
H V++RD K NIL+D KL DFG +G T V T G
Sbjct: 135 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDG 190
Query: 257 THGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSG 290
T Y+ PE++ R +S V+S G++L +++ G
Sbjct: 191 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 87/215 (40%), Gaps = 32/215 (14%)
Query: 89 LLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHP 148
LLG GGFG VY G + + VA+K ++ + +W N
Sbjct: 31 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRI---SDWGELPNGTRVPMEV 78
Query: 149 NLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAK---GLTF 205
L+K + G RLL + P + L P+P+ GA + +F
Sbjct: 79 VLLKKVSSGFSGVIRLLDWFERPDSFV---LILERPEPVQDLFDFITERGALQEELARSF 135
Query: 206 L--------HDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMG 256
H V++RD K NIL+D KL DFG +G T V T G
Sbjct: 136 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDG 191
Query: 257 THGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSG 290
T Y+ PE++ R +S V+S G++L +++ G
Sbjct: 192 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 62/148 (41%), Gaps = 28/148 (18%)
Query: 156 YCLEGENRL-------LVYEFMPKGSL---ENHLFRRGPQPLSWA---VRMKVAIGAAKG 202
YCL E + ++YE+M S+ + + F + V +
Sbjct: 104 YCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNS 163
Query: 203 LTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFG----LAKAGPTGDRTHVSTQVMGTH 258
+++H+ E + +RD K SNIL+D KLSDFG + G R GT+
Sbjct: 164 FSYIHN-EKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGSR--------GTY 214
Query: 259 GYAAPEYVA--TGRLTTKSDVYSFGVVL 284
+ PE+ + + K D++S G+ L
Sbjct: 215 EFMPPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 87/215 (40%), Gaps = 32/215 (14%)
Query: 89 LLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHP 148
LLG GGFG VY G + + VA+K ++ + +W N
Sbjct: 50 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRI---SDWGELPNGTRVPMEV 97
Query: 149 NLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAK---GLTF 205
L+K + G RLL + P + L P+P+ GA + +F
Sbjct: 98 VLLKKVSSGFSGVIRLLDWFERPDSFV---LILERPEPVQDLFDFITERGALQEELARSF 154
Query: 206 L--------HDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMG 256
H V++RD K NIL+D KL DFG +G T V T G
Sbjct: 155 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDG 210
Query: 257 THGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSG 290
T Y+ PE++ R +S V+S G++L +++ G
Sbjct: 211 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 245
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 87/215 (40%), Gaps = 32/215 (14%)
Query: 89 LLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHP 148
LLG GGFG VY G + + VA+K ++ + +W N
Sbjct: 31 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRI---SDWGELPNGTRVPMEV 78
Query: 149 NLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAK---GLTF 205
L+K + G RLL + P + L P+P+ GA + +F
Sbjct: 79 VLLKKVSSGFSGVIRLLDWFERPDSFV---LILERPEPVQDLFDFITERGALQEELARSF 135
Query: 206 L--------HDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMG 256
H V++RD K NIL+D KL DFG +G T V T G
Sbjct: 136 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDG 191
Query: 257 THGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSG 290
T Y+ PE++ R +S V+S G++L +++ G
Sbjct: 192 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 87/215 (40%), Gaps = 32/215 (14%)
Query: 89 LLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHP 148
LLG GGFG VY G + + VA+K ++ + +W N
Sbjct: 58 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRI---SDWGELPNGTRVPMEV 105
Query: 149 NLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAK---GLTF 205
L+K + G RLL + P + L P+P+ GA + +F
Sbjct: 106 VLLKKVSSGFSGVIRLLDWFERPDSFV---LILERPEPVQDLFDFITERGALQEELARSF 162
Query: 206 L--------HDAESQVIYRDFKASNILLDAEF-NAKLSDFGLAKAGPTGDRTHVSTQVMG 256
H V++RD K NIL+D KL DFG +G T V T G
Sbjct: 163 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDG 218
Query: 257 THGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSG 290
T Y+ PE++ R +S V+S G++L +++ G
Sbjct: 219 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 87/215 (40%), Gaps = 32/215 (14%)
Query: 89 LLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHP 148
LLG GGFG VY G + + VA+K ++ + +W N
Sbjct: 63 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRI---SDWGELPNGTRVPMEV 110
Query: 149 NLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAK---GLTF 205
L+K + G RLL + P + L P+P+ GA + +F
Sbjct: 111 VLLKKVSSGFSGVIRLLDWFERPDSFV---LILERPEPVQDLFDFITERGALQEELARSF 167
Query: 206 L--------HDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMG 256
H V++RD K NIL+D KL DFG +G T V T G
Sbjct: 168 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDG 223
Query: 257 THGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSG 290
T Y+ PE++ R +S V+S G++L +++ G
Sbjct: 224 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 258
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.132 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,180,182
Number of Sequences: 62578
Number of extensions: 494707
Number of successful extensions: 3868
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 880
Number of HSP's successfully gapped in prelim test: 191
Number of HSP's that attempted gapping in prelim test: 1174
Number of HSP's gapped (non-prelim): 1184
length of query: 421
length of database: 14,973,337
effective HSP length: 101
effective length of query: 320
effective length of database: 8,652,959
effective search space: 2768946880
effective search space used: 2768946880
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 53 (25.0 bits)